locus-tag	class	description
FOC83_00030	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOC83_00045	COG0842	Transport permease protein
FOC83_00050	COG1131	(ABC) transporter
FOC83_00065	COG2130	NADP-dependent
FOC83_00090	COG3842	ATPase activity
FOC83_00095	COG3842	ATPase activity
FOC83_00105	COG0395	ABC-type sugar transport system, permease component
FOC83_00150	COG0346	lactoylglutathione lyase activity
FOC83_00155	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_00175	COG3634	alkyl hydroperoxide reductase activity
FOC83_00180	COG1959	2 iron, 2 sulfur cluster binding
FOC83_00185	COG1960	acyl-CoA dehydrogenase activity
FOC83_00220	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_00225	COG0420	3'-5' exonuclease activity
FOC83_00255	COG2111	Na H antiporter
FOC83_00255	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
FOC83_00260	COG1006	Multisubunit Na H antiporter MnhC subunit
FOC83_00265	COG0651	ATP synthesis coupled electron transport
FOC83_00270	COG1863	multisubunit Na H antiporter MnhE subunit
FOC83_00275	COG2212	antiporter activity
FOC83_00280	COG1320	monovalent cation:proton antiporter activity
FOC83_00300	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC83_00305	COG0488	(ABC) transporter
FOC83_00340	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC83_00345	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC83_00355	COG2252	PERMEase
FOC83_00360	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
FOC83_00365	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
FOC83_00400	COG0583	DNA-binding transcription factor activity
FOC83_00405	COG2814	Major facilitator Superfamily
FOC83_00410	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
FOC83_00415	COG0789	Transcriptional regulator
FOC83_00430	COG0678	peroxiredoxin activity
FOC83_00430	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOC83_00440	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
FOC83_00445	COG0584	glycerophosphoryl diester phosphodiesterase
FOC83_00455	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC83_00465	COG4181	ATPase activity
FOC83_00475	COG1178	ABC-type Fe3 transport system permease component
FOC83_00480	COG3842	ATPase activity
FOC83_00485	COG0583	DNA-binding transcription factor activity
FOC83_00490	COG0560	Phosphoserine phosphatase
FOC83_00505	COG0583	DNA-binding transcription factor activity
FOC83_00520	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC83_00535	COG0583	DNA-binding transcription factor activity
FOC83_00540	COG4336	lyase activity
FOC83_00570	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_00590	COG2816	NAD+ diphosphatase activity
FOC83_00630	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_00635	COG0765	amino acid transport
FOC83_00640	COG1126	abc transporter atp-binding protein
FOC83_00645	COG1335	isochorismatase
FOC83_00655	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC83_00660	COG1758	RNA polymerase activity
FOC83_00665	COG0194	GDP metabolic process
FOC83_00670	COG3258	Cytochrome c
FOC83_00675	COG2863	cytochrome
FOC83_00680	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_00690	COG2831	hemolysin activation secretion protein
FOC83_00695	COG3210	domain, Protein
FOC83_00700	COG0791	NLP P60 protein
FOC83_00715	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
FOC83_00720	COG0833	amino acid
FOC83_00725	COG1561	YicC-like family, N-terminal region
FOC83_00730	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
FOC83_00740	COG1960	acyl-CoA dehydrogenase activity
FOC83_00755	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
FOC83_00760	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC83_00765	COG0174	glutamine synthetase
FOC83_00775	COG2204	response regulator
FOC83_00780	COG0583	DNA-binding transcription factor activity
FOC83_00785	COG1741	Belongs to the pirin family
FOC83_00790	COG1741	Belongs to the pirin family
FOC83_00795	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
FOC83_00800	COG1690	Belongs to the RtcB family
FOC83_00805	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_00810	COG3842	ATPase activity
FOC83_00815	COG4149	molybdate abc transporter
FOC83_00820	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC83_00830	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_00845	COG0583	DNA-binding transcription factor activity
FOC83_00855	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
FOC83_00865	COG0783	Belongs to the Dps family
FOC83_00875	COG0457	Tetratricopeptide repeat
FOC83_00880	COG0438	transferase activity, transferring glycosyl groups
FOC83_00905	COG1560	Kdo2-lipid A biosynthetic process
FOC83_00905	COG4783	chaperone-mediated protein folding
FOC83_00910	COG3866	Pectate lyase
FOC83_00925	COG0745	RESPONSE REGULATOR receiver
FOC83_00930	COG2205	protein histidine kinase activity
FOC83_00945	COG3842	ATPase activity
FOC83_00950	COG0395	ABC-type sugar transport system, permease component
FOC83_00955	COG1175	transmembrane transport
FOC83_00960	COG1653	transport
FOC83_00970	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
FOC83_00985	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_01010	COG1794	racemase activity, acting on amino acids and derivatives
FOC83_01015	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC83_01025	COG0583	DNA-binding transcription factor activity
FOC83_01030	COG0625	glutathione transferase activity
FOC83_01035	COG2133	pyrroloquinoline quinone binding
FOC83_01045	COG0697	spore germination
FOC83_01050	COG2363	Small membrane protein
FOC83_01070	COG0010	Belongs to the arginase family
FOC83_01080	COG1464	Belongs to the NlpA lipoprotein family
FOC83_01090	COG2814	Major facilitator Superfamily
FOC83_01100	COG1408	metallophosphoesterase
FOC83_01110	COG0688	phosphatidylethanolamine metabolic process
FOC83_01115	COG0488	(ABC) transporter
FOC83_01140	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_01145	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOC83_01150	COG5001	Diguanylate cyclase
FOC83_01150	COG3300	MHYT domain
FOC83_01165	COG2814	Major facilitator Superfamily
FOC83_01190	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC83_01195	COG2204	response regulator
FOC83_01230	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_01250	COG0693	protein deglycase activity
FOC83_01270	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC83_01280	COG1289	transmembrane transporter activity
FOC83_01285	COG3300	MHYT domain
FOC83_01285	COG5001	Diguanylate cyclase
FOC83_01300	COG4774	siderophore transport
FOC83_01335	COG1253	flavin adenine dinucleotide binding
FOC83_01345	COG2205	protein histidine kinase activity
FOC83_01515	COG3706	GGDEF domain
FOC83_01520	COG0789	Transcriptional regulator
FOC83_01530	COG3706	GGDEF domain
FOC83_01560	COG1116	anion transmembrane transporter activity
FOC83_01565	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_01570	COG4521	taurine ABC transporter
FOC83_01595	COG0793	Belongs to the peptidase S41A family
FOC83_01615	COG0628	permease
FOC83_01625	COG1619	proteins homologs of microcin C7 resistance protein MccF
FOC83_01640	COG0531	amino acid
FOC83_01650	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC83_01655	COG4608	Belongs to the ABC transporter superfamily
FOC83_01660	COG0444	Belongs to the ABC transporter superfamily
FOC83_01670	COG0601	transmembrane transport
FOC83_01675	COG0747	negative chemotaxis
FOC83_01685	COG0251	oxidation-reduction process
FOC83_01705	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC83_01720	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FOC83_01735	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC83_01745	COG3971	2-oxopent-4-enoate hydratase activity
FOC83_01775	COG0625	glutathione transferase activity
FOC83_01790	COG0477	Major facilitator Superfamily
FOC83_01800	COG0579	oxidoreductase
FOC83_01815	COG0625	glutathione transferase activity
FOC83_01830	COG0431	NADPH-dependent FMN reductase
FOC83_01840	COG0798	PFAM Bile acid sodium symporter
FOC83_01850	COG0640	Transcriptional regulator
FOC83_01860	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
FOC83_01880	COG1126	abc transporter atp-binding protein
FOC83_01885	COG0765	amino acid transport
FOC83_01890	COG4597	amino acid ABC transporter
FOC83_01895	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_01900	COG0626	cystathionine gamma-synthase activity
FOC83_01905	COG0583	DNA-binding transcription factor activity
FOC83_01925	COG0444	Belongs to the ABC transporter superfamily
FOC83_01935	COG0601	transmembrane transport
FOC83_01940	COG0747	negative chemotaxis
FOC83_01950	COG0583	DNA-binding transcription factor activity
FOC83_01955	COG1335	isochorismatase
FOC83_01960	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC83_01970	COG2358	TRAP transporter, solute receptor (TAXI family
FOC83_01975	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_01980	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_01990	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC83_01995	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC83_01995	COG0519	Catalyzes the synthesis of GMP from XMP
FOC83_02005	COG1276	copper resistance
FOC83_02025	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_02030	COG3386	PFAM SMP-30 Gluconolaconase
FOC83_02035	COG2721	sulfolactate sulfo-lyase activity
FOC83_02055	COG0745	RESPONSE REGULATOR receiver
FOC83_02065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_02070	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
FOC83_02075	COG3842	ATPase activity
FOC83_02080	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC83_02095	COG0586	Pfam SNARE associated Golgi protein
FOC83_02100	COG0390	transport system, permease component
FOC83_02110	COG3486	L-lysine 6-monooxygenase (NADPH) activity
FOC83_02155	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_02160	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_02165	COG1120	ATPase activity
FOC83_02170	COG1126	abc transporter atp-binding protein
FOC83_02175	COG0765	amino acid transport
FOC83_02185	COG2070	2-Nitropropane dioxygenase
FOC83_02190	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC83_02200	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC83_02225	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOC83_02230	COG0583	DNA-binding transcription factor activity
FOC83_02240	COG1846	Transcriptional regulator
FOC83_02250	COG4191	Histidine kinase
FOC83_02255	COG4566	intracellular signal transduction
FOC83_02285	COG0583	DNA-binding transcription factor activity
FOC83_02315	COG0765	amino acid transport
FOC83_02320	COG0436	Aminotransferase
FOC83_02345	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
FOC83_02370	COG0251	oxidation-reduction process
FOC83_02410	COG4948	Mandelate Racemase Muconate Lactonizing
FOC83_02420	COG1802	Transcriptional regulator
FOC83_02425	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_02440	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC83_02465	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_02470	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC83_02475	COG1116	anion transmembrane transporter activity
FOC83_02475	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC83_02510	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_02515	COG4597	amino acid ABC transporter
FOC83_02520	COG3154	lipid carrier protein
FOC83_02525	COG0826	peptidase U32
FOC83_02530	COG0826	peptidase U32
FOC83_02535	COG2197	response regulator
FOC83_02540	COG3850	Histidine kinase
FOC83_02545	COG1763	Mo-molybdopterin cofactor biosynthetic process
FOC83_02550	COG0288	reversible hydration of carbon dioxide
FOC83_02555	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC83_02560	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC83_02565	COG2181	nitrate reductase activity
FOC83_02570	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
FOC83_02575	COG1140	nitrate reductase beta subunit
FOC83_02580	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
FOC83_02585	COG2223	nitrite transmembrane transporter activity
FOC83_02630	COG0583	DNA-binding transcription factor activity
FOC83_02640	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_02670	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_02690	COG2070	2-Nitropropane dioxygenase
FOC83_02705	COG5002	protein histidine kinase activity
FOC83_02710	COG0745	RESPONSE REGULATOR receiver
FOC83_02715	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
FOC83_02720	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC83_02730	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC83_02735	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC83_02750	COG0783	Belongs to the Dps family
FOC83_02780	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_02785	COG0697	spore germination
FOC83_02790	COG2879	small protein
FOC83_02795	COG1966	Carbon starvation protein
FOC83_02820	COG0583	DNA-binding transcription factor activity
FOC83_02825	COG4521	taurine ABC transporter
FOC83_02830	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC83_02835	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_02850	COG3712	iron ion homeostasis
FOC83_02855	COG1595	DNA-templated transcription, initiation
FOC83_02860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_02875	COG0235	Class ii aldolase
FOC83_02880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_02890	COG0523	cobalamin synthesis protein
FOC83_02895	COG1228	amidohydrolase
FOC83_02900	COG4172	Belongs to the ABC transporter superfamily
FOC83_02905	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_02910	COG0601	transmembrane transport
FOC83_02915	COG0747	negative chemotaxis
FOC83_02930	COG1414	Transcriptional regulator
FOC83_02935	COG0513	Belongs to the DEAD box helicase family
FOC83_02940	COG0602	queuosine metabolic process
FOC83_02945	COG0720	synthase
FOC83_02955	COG1289	transmembrane transporter activity
FOC83_02965	COG1566	PFAM secretion protein HlyD family protein
FOC83_02980	COG0028	Belongs to the TPP enzyme family
FOC83_02990	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_03000	COG0400	carboxylic ester hydrolase activity
FOC83_03005	COG0833	amino acid
FOC83_03025	COG0587	DNA-directed DNA polymerase activity
FOC83_03045	COG0667	Aldo Keto reductase
FOC83_03055	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
FOC83_03065	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_03070	COG0583	DNA-binding transcription factor activity
FOC83_03110	COG3038	cytochrome b561
FOC83_03135	COG0840	transmembrane signaling receptor activity
FOC83_03215	COG2764	glyoxalase bleomycin resistance protein dioxygenase
FOC83_03235	COG4774	siderophore transport
FOC83_03240	COG2345	Transcriptional regulator
FOC83_03250	COG1414	Transcriptional regulator
FOC83_03260	COG0477	Major facilitator Superfamily
FOC83_03265	COG0667	Aldo Keto reductase
FOC83_03275	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_03280	COG1309	transcriptional regulator
FOC83_03300	COG1683	Conserved Protein
FOC83_03310	COG2207	Transcriptional regulator
FOC83_03330	COG2885	chlorophyll binding
FOC83_03330	COG3047	cAMP biosynthetic process
FOC83_03345	COG3795	YCII-related domain
FOC83_03350	COG3795	YCII-related domain
FOC83_03360	COG4941	Belongs to the sigma-70 factor family
FOC83_03370	COG0697	spore germination
FOC83_03380	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC83_03390	COG0583	DNA-binding transcription factor activity
FOC83_03420	COG1846	Transcriptional regulator
FOC83_03425	COG3541	Predicted nucleotidyltransferase
FOC83_03445	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_03500	COG1360	Flagellar Motor Protein
FOC83_03510	COG3670	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
FOC83_03540	COG3501	Rhs element vgr protein
FOC83_03600	COG3501	Rhs element vgr protein
FOC83_03690	COG0625	glutathione transferase activity
FOC83_03695	COG2032	superoxide dismutase activity
FOC83_03700	COG2733	membrane
FOC83_03710	COG0148	phosphopyruvate hydratase activity
FOC83_03735	COG0583	DNA-binding transcription factor activity
FOC83_03740	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_03740	COG1024	Enoyl-CoA hydratase
FOC83_03745	COG0183	Belongs to the thiolase family
FOC83_03750	COG1960	acyl-CoA dehydrogenase activity
FOC83_03755	COG1960	acyl-CoA dehydrogenase activity
FOC83_03760	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_03770	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FOC83_03785	COG0583	DNA-binding transcription factor activity
FOC83_03795	COG1846	Transcriptional regulator
FOC83_03800	COG0477	Major facilitator Superfamily
FOC83_03805	COG2010	Cytochrome c
FOC83_03805	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FOC83_03810	COG2080	2 iron, 2 sulfur cluster binding
FOC83_03820	COG0596	Alpha beta hydrolase
FOC83_03825	COG2309	aminopeptidase activity
FOC83_03830	COG1335	isochorismatase
FOC83_03835	COG1529	Aldehyde oxidase and xanthine dehydrogenase
FOC83_03835	COG2010	Cytochrome c
FOC83_03845	COG1522	sequence-specific DNA binding
FOC83_03850	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_03855	COG3842	ATPase activity
FOC83_03860	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC83_03865	COG4149	molybdate abc transporter
FOC83_03870	COG5001	Diguanylate cyclase
FOC83_03870	COG4251	negative regulation of phosphorylation
FOC83_03870	COG3706	GGDEF domain
FOC83_03870	COG2203	Gaf domain
FOC83_03875	COG2201	protein-glutamate methylesterase activity
FOC83_03900	COG0840	transmembrane signaling receptor activity
FOC83_03905	COG0154	amidase activity
FOC83_03920	COG0583	DNA-binding transcription factor activity
FOC83_03950	COG0456	acetyltransferase
FOC83_03965	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_04015	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
FOC83_04035	COG0165	Argininosuccinate lyase
FOC83_04050	COG0583	DNA-binding transcription factor activity
FOC83_04065	COG2205	protein histidine kinase activity
FOC83_04085	COG2207	Transcriptional regulator
FOC83_04090	COG2267	carboxylic ester hydrolase activity
FOC83_04100	COG4221	oxidoreductase activity
FOC83_04105	COG2207	Transcriptional regulator
FOC83_04135	COG0640	Transcriptional regulator
FOC83_04140	COG0640	Transcriptional regulator
FOC83_04150	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
FOC83_04155	COG0583	DNA-binding transcription factor activity
FOC83_04160	COG0431	NADPH-dependent FMN reductase
FOC83_04195	COG4264	IucA IucC family
FOC83_04210	COG3328	transposase activity
FOC83_04230	COG3621	Patatin-like phospholipase
FOC83_04265	COG0633	Ferredoxin
FOC83_04270	COG0789	Transcriptional regulator
FOC83_04280	COG0640	Transcriptional regulator
FOC83_04285	COG2814	Major facilitator Superfamily
FOC83_04290	COG1937	Protein conserved in bacteria
FOC83_04295	COG1230	cation diffusion facilitator family transporter
FOC83_04300	COG0640	Transcriptional regulator
FOC83_04325	COG2814	Major facilitator Superfamily
FOC83_04335	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOC83_04360	COG1192	Involved in chromosome partitioning
FOC83_04390	COG5489	Protein of unknown function (DUF736)
FOC83_04400	COG1475	DNA binding
FOC83_04410	COG3077	Addiction module antitoxin, RelB DinJ family
FOC83_04485	COG0582	viral genome integration into host DNA
FOC83_04535	COG0798	PFAM Bile acid sodium symporter
FOC83_04570	COG4691	Plasmid stability protein
FOC83_04600	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC83_04600	COG0519	Catalyzes the synthesis of GMP from XMP
FOC83_04630	COG0583	DNA-binding transcription factor activity
FOC83_04640	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC83_04670	COG0583	DNA-binding transcription factor activity
FOC83_04675	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_04980	COG2974	May be involved in recombination
FOC83_04985	COG0419	ATPase involved in DNA repair
FOC83_05045	COG2072	flavoprotein involved in K transport
FOC83_05050	COG0601	transmembrane transport
FOC83_05055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_05065	COG4608	Belongs to the ABC transporter superfamily
FOC83_05070	COG0747	negative chemotaxis
FOC83_05085	COG0583	DNA-binding transcription factor activity
FOC83_05090	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_05095	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC83_05100	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_05150	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC83_05175	COG0583	DNA-binding transcription factor activity
FOC83_05230	COG5001	Diguanylate cyclase
FOC83_05235	COG4774	siderophore transport
FOC83_05240	COG4774	siderophore transport
FOC83_05255	COG0583	DNA-binding transcription factor activity
FOC83_05305	COG1953	Uracil, thiamine, allantoin
FOC83_05340	COG0583	DNA-binding transcription factor activity
FOC83_05345	COG2198	Histidine kinase
FOC83_05345	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_05345	COG0784	Response regulator, receiver
FOC83_05345	COG2205	protein histidine kinase activity
FOC83_05350	COG3292	Two component regulator propeller
FOC83_05350	COG2205	protein histidine kinase activity
FOC83_05350	COG0745	RESPONSE REGULATOR receiver
FOC83_05375	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_05380	COG0583	DNA-binding transcription factor activity
FOC83_05385	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_05395	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_05405	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC83_05415	COG0583	DNA-binding transcription factor activity
FOC83_05430	COG0642	Histidine kinase
FOC83_05435	COG0745	RESPONSE REGULATOR receiver
FOC83_05455	COG1595	DNA-templated transcription, initiation
FOC83_05460	COG3712	iron ion homeostasis
FOC83_05465	COG4774	siderophore transport
FOC83_05470	COG0047	phosphoribosylformylglycinamidine synthase activity
FOC83_05470	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
FOC83_05485	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC83_05495	COG0613	PHP domain protein
FOC83_05510	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC83_05520	COG0583	DNA-binding transcription factor activity
FOC83_05530	COG0583	DNA-binding transcription factor activity
FOC83_05535	COG0477	Major facilitator Superfamily
FOC83_05540	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC83_05550	COG0159	tryptophan synthase activity
FOC83_05575	COG0277	FAD linked oxidase domain protein
FOC83_05580	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_05590	COG3119	arylsulfatase activity
FOC83_05625	COG2149	membrane
FOC83_05635	COG3093	addiction module antidote protein HigA
FOC83_05660	COG2249	NAD(P)H dehydrogenase (quinone) activity
FOC83_05670	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FOC83_05675	COG0459	protein refolding
FOC83_05710	COG1262	PFAM Formylglycine-generating sulfatase enzyme
FOC83_05715	COG0714	Associated with various cellular activities
FOC83_05735	COG2304	oxidoreductase activity
FOC83_05750	COG3119	arylsulfatase activity
FOC83_05760	COG1280	lysine exporter protein (LysE YggA)
FOC83_05790	COG0633	Ferredoxin
FOC83_05795	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_05800	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_05805	COG4133	protoheme IX ABC transporter activity
FOC83_05810	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC83_05835	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
FOC83_05850	COG4604	ABC transporter, ATP-binding protein
FOC83_05855	COG4605	iron ion homeostasis
FOC83_05860	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_05865	COG4607	ABC-type enterochelin transport system periplasmic component
FOC83_05870	COG4771	TonB-dependent receptor
FOC83_05875	COG0745	RESPONSE REGULATOR receiver
FOC83_05885	COG0084	hydrolase, TatD family'
FOC83_05890	COG1136	(ABC) transporter
FOC83_05910	COG2271	Major facilitator Superfamily
FOC83_05920	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_05925	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
FOC83_05940	COG3135	benzoate transporter
FOC83_05945	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC83_05950	COG1309	transcriptional regulator
FOC83_05955	COG0183	Belongs to the thiolase family
FOC83_05960	COG1022	Amp-dependent synthetase and ligase
FOC83_05990	COG1024	Enoyl-CoA hydratase
FOC83_06000	COG1803	Methylglyoxal synthase
FOC83_06005	COG2975	iron-sulfur cluster assembly
FOC83_06010	COG0633	Ferredoxin
FOC83_06015	COG0443	Heat shock 70 kDa protein
FOC83_06020	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
FOC83_06025	COG0316	Belongs to the HesB IscA family
FOC83_06030	COG0822	iron-sulfur transferase activity
FOC83_06035	COG1104	cysteine desulfurase activity
FOC83_06045	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC83_06050	COG0556	nucleotide-excision repair
FOC83_06060	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOC83_06065	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
FOC83_06070	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
FOC83_06075	COG0740	serine-type endopeptidase activity
FOC83_06080	COG0544	peptidyl-prolyl cis-trans isomerase activity
FOC83_06085	COG0501	Belongs to the peptidase M48B family
FOC83_06095	COG1278	Cold shock
FOC83_06105	COG1278	Cold shock
FOC83_06130	COG0251	oxidation-reduction process
FOC83_06140	COG0583	DNA-binding transcription factor activity
FOC83_06175	COG2877	3-deoxy-8-phosphooctulonate synthase activity
FOC83_06200	COG0277	FAD linked oxidase domain protein
FOC83_06215	COG2814	Major facilitator Superfamily
FOC83_06415	COG0740	serine-type endopeptidase activity
FOC83_06515	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
FOC83_06540	COG3685	Protein conserved in bacteria
FOC83_06545	COG3546	catalase activity
FOC83_06560	COG1475	DNA binding
FOC83_06640	COG2171	N-acyltransferase activity
FOC83_06650	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC83_06655	COG0488	(ABC) transporter
FOC83_06670	COG4771	TonB-dependent receptor
FOC83_06675	COG4771	TonB-dependent receptor
FOC83_06685	COG4771	TonB-dependent receptor
FOC83_06695	COG1858	cytochrome C peroxidase
FOC83_06705	COG0210	DNA helicase
FOC83_06720	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC83_06720	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC83_06725	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
FOC83_06730	COG0196	riboflavin kinase activity
FOC83_06735	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
FOC83_06740	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FOC83_06745	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
FOC83_06795	COG1902	pentaerythritol trinitrate reductase activity
FOC83_06800	COG1126	abc transporter atp-binding protein
FOC83_06805	COG0765	amino acid transport
FOC83_06810	COG0765	amino acid transport
FOC83_06815	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_06830	COG1764	response to oxidative stress
FOC83_06840	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC83_06845	COG0625	glutathione transferase activity
FOC83_06865	COG2271	Major facilitator Superfamily
FOC83_06895	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOC83_06895	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
FOC83_06895	COG0506	proline dehydrogenase activity
FOC83_06905	COG3008	intermembrane lipid transfer
FOC83_06910	COG2995	paraquat-inducible protein a
FOC83_06920	COG4953	penicillin-binding protein 1C
FOC83_06925	COG2373	Large extracellular alpha-helical protein
FOC83_06930	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
FOC83_06935	COG1278	Cold shock
FOC83_06945	COG0183	Belongs to the thiolase family
FOC83_06950	COG0038	chloride channel
FOC83_06960	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
FOC83_06970	COG1570	exodeoxyribonuclease VII activity
FOC83_06975	COG0811	peptide transport
FOC83_06985	COG1663	tetraacyldisaccharide 4'-kinase activity
FOC83_06995	COG2835	tetraacyldisaccharide 4'-kinase activity
FOC83_07000	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
FOC83_07005	COG0563	adenylate kinase activity
FOC83_07015	COG0728	peptidoglycan biosynthetic process
FOC83_07025	COG0268	Binds directly to 16S ribosomal RNA
FOC83_07030	COG0583	DNA-binding transcription factor activity
FOC83_07045	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_07050	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC83_07055	COG2186	Transcriptional regulator
FOC83_07065	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_07075	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC83_07105	COG3384	dioxygenase
FOC83_07110	COG1012	belongs to the aldehyde dehydrogenase family
FOC83_07125	COG3971	2-oxopent-4-enoate hydratase activity
FOC83_07135	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_07140	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC83_07145	COG1562	ergosterol biosynthetic process
FOC83_07150	COG1562	ergosterol biosynthetic process
FOC83_07160	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
FOC83_07175	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC83_07190	COG5564	TIM-barrel signal transduction protein
FOC83_07195	COG5441	Belongs to the UPF0261 family
FOC83_07220	COG0542	response to heat
FOC83_07230	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC83_07240	COG0477	Major facilitator Superfamily
FOC83_07260	COG0494	nUDIX hydrolase
FOC83_07265	COG0583	DNA-binding transcription factor activity
FOC83_07270	COG0443	Heat shock 70 kDa protein
FOC83_07305	COG2814	Major facilitator Superfamily
FOC83_07315	COG3530	Putative quorum-sensing-regulated virulence factor
FOC83_07330	COG0625	glutathione transferase activity
FOC83_07355	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_07365	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
FOC83_07425	COG1522	sequence-specific DNA binding
FOC83_07435	COG4172	Belongs to the ABC transporter superfamily
FOC83_07460	COG0519	Catalyzes the synthesis of GMP from XMP
FOC83_07475	COG1595	DNA-templated transcription, initiation
FOC83_07495	COG0519	Catalyzes the synthesis of GMP from XMP
FOC83_07500	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FOC83_07505	COG2951	lytic endotransglycosylase activity
FOC83_07515	COG0583	DNA-binding transcription factor activity
FOC83_07525	COG2272	Belongs to the type-B carboxylesterase lipase family
FOC83_07530	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_07545	COG1473	amidohydrolase
FOC83_07550	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_07565	COG1712	Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate
FOC83_07580	COG3618	amidohydrolase
FOC83_07585	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_07620	COG2011	ABC-type metal ion transport system permease component
FOC83_07625	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC83_07640	COG2814	Major facilitator Superfamily
FOC83_07650	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FOC83_07655	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_07695	COG2837	iron assimilation
FOC83_07745	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC83_07755	COG0583	DNA-binding transcription factor activity
FOC83_07760	COG2814	Major facilitator Superfamily
FOC83_07765	COG2169	Transcriptional regulator
FOC83_07795	COG1272	protein, Hemolysin III
FOC83_07805	COG1278	Cold shock
FOC83_07835	COG4638	Rieske (2fe-2S)
FOC83_07850	COG0604	alcohol dehydrogenase
FOC83_07850	COG3321	synthase
FOC83_07865	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_07870	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC83_07895	COG0183	Belongs to the thiolase family
FOC83_07910	COG0842	Transport permease protein
FOC83_07915	COG1131	(ABC) transporter
FOC83_07925	COG2197	response regulator
FOC83_07930	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC83_07930	COG1116	anion transmembrane transporter activity
FOC83_07935	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_07940	COG1116	anion transmembrane transporter activity
FOC83_07945	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
FOC83_07965	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC83_07995	COG0811	peptide transport
FOC83_08055	COG1396	sequence-specific DNA binding
FOC83_08060	COG0235	Class ii aldolase
FOC83_08070	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_08110	COG1024	Enoyl-CoA hydratase
FOC83_08125	COG0583	DNA-binding transcription factor activity
FOC83_08180	COG3384	dioxygenase
FOC83_08210	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC83_08215	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FOC83_08220	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC83_08235	COG1609	Transcriptional regulator
FOC83_08240	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC83_08245	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC83_08255	COG1850	ribulose-bisphosphate carboxylase activity
FOC83_08270	COG0505	Belongs to the CarA family
FOC83_08290	COG3608	succinylglutamate desuccinylase aspartoacylase
FOC83_08290	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
FOC83_08295	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FOC83_08310	COG2207	Transcriptional regulator
FOC83_08315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_08405	COG2192	nodulation
FOC83_08415	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOC83_08420	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_08425	COG0438	transferase activity, transferring glycosyl groups
FOC83_08435	COG5265	(ABC) transporter
FOC83_08455	COG0668	transmembrane transport
FOC83_08465	COG0166	Belongs to the GPI family
FOC83_08495	COG0387	Pfam Sodium calcium exchanger
FOC83_08500	COG3568	Endonuclease Exonuclease Phosphatase
FOC83_08505	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC83_08510	COG0392	lysyltransferase activity
FOC83_08515	COG0297	glycogen (starch) synthase activity
FOC83_08520	COG0366	Alpha amylase catalytic
FOC83_08525	COG0366	Alpha amylase catalytic
FOC83_08530	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOC83_08540	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
FOC83_08545	COG1640	4-alpha-glucanotransferase
FOC83_08555	COG1113	amino acid transport
FOC83_08570	COG1058	Belongs to the CinA family
FOC83_08570	COG1546	Belongs to the CinA family
FOC83_08580	COG3852	Histidine kinase
FOC83_08605	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC83_08615	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC83_08625	COG0477	Major facilitator Superfamily
FOC83_08640	COG4771	TonB-dependent receptor
FOC83_08670	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
FOC83_08690	COG0596	Alpha beta hydrolase
FOC83_08705	COG1414	Transcriptional regulator
FOC83_08710	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC83_08715	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_08725	COG2721	sulfolactate sulfo-lyase activity
FOC83_08735	COG0765	amino acid transport
FOC83_08750	COG4948	Mandelate Racemase Muconate Lactonizing
FOC83_08760	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC83_08765	COG3958	Transketolase
FOC83_08770	COG3959	Transketolase, thiamine diphosphate binding domain
FOC83_08775	COG1802	Transcriptional regulator
FOC83_08780	COG0371	Dehydrogenase
FOC83_08785	COG3246	L-lysine catabolic process to acetate
FOC83_08790	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_08795	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_08805	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_08820	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_08820	COG3321	synthase
FOC83_08820	COG0604	alcohol dehydrogenase
FOC83_08825	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_08855	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_08865	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC83_08890	COG2814	Major facilitator Superfamily
FOC83_08905	COG3384	dioxygenase
FOC83_08920	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
FOC83_08975	COG4964	Belongs to the GSP D family
FOC83_09020	COG1846	Transcriptional regulator
FOC83_09025	COG4172	Belongs to the ABC transporter superfamily
FOC83_09030	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_09035	COG0601	transmembrane transport
FOC83_09050	COG0598	Magnesium transport protein CorA
FOC83_09070	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC83_09085	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC83_09090	COG1045	serine acetyltransferase
FOC83_09095	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
FOC83_09100	COG0166	Belongs to the GPI family
FOC83_09105	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC83_09110	COG3206	protein involved in exopolysaccharide biosynthesis
FOC83_09110	COG0489	protein tyrosine kinase activity
FOC83_09115	COG1596	polysaccharide export
FOC83_09125	COG1051	belongs to the nudix hydrolase family
FOC83_09145	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC83_09170	COG0463	Glycosyl transferase, family 2
FOC83_09175	COG0110	maltose O-acetyltransferase activity
FOC83_09180	COG0297	glycogen (starch) synthase activity
FOC83_09185	COG2197	response regulator
FOC83_09190	COG2197	response regulator
FOC83_09200	COG1309	transcriptional regulator
FOC83_09205	COG1960	acyl-CoA dehydrogenase activity
FOC83_09215	COG1024	Enoyl-CoA hydratase
FOC83_09215	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_09225	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_09225	COG1024	Enoyl-CoA hydratase
FOC83_09230	COG0183	Belongs to the thiolase family
FOC83_09245	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_09255	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_09265	COG1132	(ABC) transporter
FOC83_09275	COG3395	kinase activity
FOC83_09280	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOC83_09290	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC83_09295	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
FOC83_09310	COG1414	Transcriptional regulator
FOC83_09320	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
FOC83_09340	COG0583	DNA-binding transcription factor activity
FOC83_09370	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
FOC83_09375	COG1309	transcriptional regulator
FOC83_09385	COG1051	belongs to the nudix hydrolase family
FOC83_09390	COG2603	Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA
FOC83_09400	COG0784	Response regulator, receiver
FOC83_09400	COG2205	protein histidine kinase activity
FOC83_09410	COG2205	protein histidine kinase activity
FOC83_09410	COG0784	Response regulator, receiver
FOC83_09425	COG2863	cytochrome
FOC83_09430	COG3258	Cytochrome c
FOC83_09445	COG3278	Belongs to the heme-copper respiratory oxidase family
FOC83_09465	COG0348	domain, Protein
FOC83_09495	COG0527	aspartate kinase activity
FOC83_09500	COG0037	tRNA processing
FOC83_09505	COG0825	malonyl-CoA metabolic process
FOC83_09515	COG0215	cysteine-tRNA ligase activity
FOC83_09530	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOC83_09535	COG1968	undecaprenyl-diphosphatase activity
FOC83_09540	COG1253	flavin adenine dinucleotide binding
FOC83_09555	COG4263	nitrous-oxide reductase activity
FOC83_09570	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
FOC83_09580	COG1477	protein flavinylation
FOC83_09585	COG4804	nuclease activity
FOC83_09610	COG0668	transmembrane transport
FOC83_09650	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC83_09655	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_09660	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC83_09695	COG3360	Dodecin
FOC83_09705	COG0583	DNA-binding transcription factor activity
FOC83_09710	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_09770	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
FOC83_09775	COG2850	peptidyl-arginine hydroxylation
FOC83_09785	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
FOC83_09790	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_09795	COG1994	Peptidase M50
FOC83_09800	COG0009	L-threonylcarbamoyladenylate synthase
FOC83_09805	COG2321	neutral zinc metallopeptidase
FOC83_09865	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC83_09870	COG3969	phosphoadenosine phosphosulfate
FOC83_09880	COG1475	DNA binding
FOC83_09885	COG0642	Histidine kinase
FOC83_09905	COG3188	usher protein
FOC83_09910	COG3121	Chaperone
FOC83_09925	COG3300	MHYT domain
FOC83_09925	COG5001	Diguanylate cyclase
FOC83_09935	COG2197	response regulator
FOC83_09965	COG3121	Chaperone
FOC83_09970	COG3188	usher protein
FOC83_10015	COG3387	PFAM Glycoside hydrolase 15-related
FOC83_10030	COG0840	transmembrane signaling receptor activity
FOC83_10035	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_10040	COG1280	lysine exporter protein (LysE YggA)
FOC83_10065	COG3728	DNA packaging
FOC83_10110	COG0582	viral genome integration into host DNA
FOC83_10120	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC83_10140	COG2084	Dehydrogenase
FOC83_10160	COG1595	DNA-templated transcription, initiation
FOC83_10175	COG1802	Transcriptional regulator
FOC83_10190	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC83_10215	COG0745	RESPONSE REGULATOR receiver
FOC83_10220	COG2205	protein histidine kinase activity
FOC83_10225	COG1764	response to oxidative stress
FOC83_10230	COG0583	DNA-binding transcription factor activity
FOC83_10235	COG0601	transmembrane transport
FOC83_10240	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_10245	COG0444	Belongs to the ABC transporter superfamily
FOC83_10250	COG4608	Belongs to the ABC transporter superfamily
FOC83_10265	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_10270	COG0586	Pfam SNARE associated Golgi protein
FOC83_10275	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_10280	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
FOC83_10340	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_10345	COG0765	amino acid transport
FOC83_10355	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_10365	COG1012	belongs to the aldehyde dehydrogenase family
FOC83_10410	COG0348	domain, Protein
FOC83_10430	COG3278	Belongs to the heme-copper respiratory oxidase family
FOC83_10445	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC83_10450	COG0156	8-amino-7-oxononanoate synthase activity
FOC83_10475	COG2224	Isocitrate lyase
FOC83_10480	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FOC83_10480	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
FOC83_10485	COG1858	cytochrome C peroxidase
FOC83_10490	COG0583	DNA-binding transcription factor activity
FOC83_10495	COG0473	3-isopropylmalate dehydrogenase activity
FOC83_10505	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
FOC83_10520	COG0736	holo-[acyl-carrier-protein] synthase activity
FOC83_10525	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
FOC83_10535	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC83_10540	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC83_10565	COG3842	ATPase activity
FOC83_10570	COG4149	molybdate abc transporter
FOC83_10575	COG0725	ABC transporter, periplasmic molybdate-binding protein
FOC83_10580	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
FOC83_10605	COG4262	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC83_10615	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_10625	COG4120	Belongs to the binding-protein-dependent transport system permease family
FOC83_10635	COG0667	Aldo Keto reductase
FOC83_10645	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_10650	COG1024	Enoyl-CoA hydratase
FOC83_10660	COG1802	Transcriptional regulator
FOC83_10670	COG0183	Belongs to the thiolase family
FOC83_10675	COG1960	acyl-CoA dehydrogenase activity
FOC83_10680	COG1960	acyl-CoA dehydrogenase activity
FOC83_10685	COG0583	DNA-binding transcription factor activity
FOC83_10710	COG4213	ABC transporter substrate-binding protein
FOC83_10715	COG1129	ABC transporter
FOC83_10720	COG4214	carbohydrate transport
FOC83_10725	COG2706	6-phosphogluconolactonase activity
FOC83_10730	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC83_10750	COG4176	ABC-type proline glycine betaine transport system permease component
FOC83_10760	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC83_10765	COG2814	Major facilitator Superfamily
FOC83_10770	COG0227	Belongs to the bacterial ribosomal protein bL28 family
FOC83_10775	COG0267	Belongs to the bacterial ribosomal protein bL33 family
FOC83_10810	COG1686	Belongs to the peptidase S11 family
FOC83_10825	COG1846	Transcriptional regulator
FOC83_10830	COG2814	Major facilitator Superfamily
FOC83_10835	COG0495	leucyl-tRNA aminoacylation
FOC83_10850	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
FOC83_10870	COG0154	amidase activity
FOC83_10880	COG0477	Major facilitator Superfamily
FOC83_10890	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_10905	COG0583	DNA-binding transcription factor activity
FOC83_10955	COG0583	DNA-binding transcription factor activity
FOC83_10960	COG0427	acetyl-CoA hydrolase
FOC83_10965	COG0583	DNA-binding transcription factor activity
FOC83_10970	COG1511	domain protein
FOC83_10970	COG3264	Mechanosensitive ion channel
FOC83_11020	COG3842	ATPase activity
FOC83_11025	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC83_11030	COG1177	transmembrane transport
FOC83_11035	COG3938	Belongs to the proline racemase family
FOC83_11050	COG0517	IMP dehydrogenase activity
FOC83_11080	COG0500	methyltransferase
FOC83_11095	COG2335	COG2335, Secreted and surface protein containing fasciclin-like repeats
FOC83_11110	COG0667	Aldo Keto reductase
FOC83_11115	COG2207	Transcriptional regulator
FOC83_11120	COG0583	DNA-binding transcription factor activity
FOC83_11125	COG1335	isochorismatase
FOC83_11135	COG2841	Protein conserved in bacteria
FOC83_11150	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC83_11155	COG0438	transferase activity, transferring glycosyl groups
FOC83_11175	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_11180	COG1104	cysteine desulfurase activity
FOC83_11185	COG1024	Enoyl-CoA hydratase
FOC83_11200	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
FOC83_11215	COG0583	DNA-binding transcription factor activity
FOC83_11235	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_11255	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_11265	COG1902	pentaerythritol trinitrate reductase activity
FOC83_11280	COG1024	Enoyl-CoA hydratase
FOC83_11285	COG1024	Enoyl-CoA hydratase
FOC83_11295	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_11305	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_11315	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC83_11355	COG1960	acyl-CoA dehydrogenase activity
FOC83_11360	COG1024	Enoyl-CoA hydratase
FOC83_11365	COG0697	spore germination
FOC83_11370	COG1024	Enoyl-CoA hydratase
FOC83_11375	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC83_11380	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_11390	COG1902	pentaerythritol trinitrate reductase activity
FOC83_11390	COG0446	pyridine nucleotide-disulphide oxidoreductase
FOC83_11395	COG2814	Major facilitator Superfamily
FOC83_11400	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_11400	COG0604	alcohol dehydrogenase
FOC83_11400	COG3321	synthase
FOC83_11410	COG1846	Transcriptional regulator
FOC83_11415	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC83_11435	COG0183	Belongs to the thiolase family
FOC83_11445	COG1960	acyl-CoA dehydrogenase activity
FOC83_11450	COG0583	DNA-binding transcription factor activity
FOC83_11465	COG2814	Major facilitator Superfamily
FOC83_11470	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
FOC83_11495	COG0248	Ppx GppA phosphatase
FOC83_11505	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
FOC83_11515	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC83_11520	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
FOC83_11525	COG1534	Rna-binding protein
FOC83_11530	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
FOC83_11535	COG0840	transmembrane signaling receptor activity
FOC83_11540	COG2233	PERMEase
FOC83_11560	COG3842	ATPase activity
FOC83_11575	COG4221	oxidoreductase activity
FOC83_11585	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
FOC83_11590	COG0505	Belongs to the CarA family
FOC83_11610	COG0745	RESPONSE REGULATOR receiver
FOC83_11625	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_11635	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC83_11640	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_11655	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC83_11665	COG1074	ATP-dependent DNA helicase activity
FOC83_11685	COG2070	2-Nitropropane dioxygenase
FOC83_11705	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_11720	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC83_11725	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_11740	COG1686	Belongs to the peptidase S11 family
FOC83_11755	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
FOC83_11760	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
FOC83_11765	COG4974	Belongs to the 'phage' integrase family
FOC83_11770	COG0583	DNA-binding transcription factor activity
FOC83_11775	COG0028	Belongs to the TPP enzyme family
FOC83_11820	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOC83_11865	COG0028	Belongs to the TPP enzyme family
FOC83_11870	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_11885	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC83_11890	COG1414	Transcriptional regulator
FOC83_11895	COG0009	L-threonylcarbamoyladenylate synthase
FOC83_11900	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
FOC83_11905	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
FOC83_11910	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC83_11920	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
FOC83_11940	COG1301	dicarboxylic acid transport
FOC83_11950	COG3454	Phosphonate metabolism
FOC83_11955	COG4778	phosphonate C-P lyase system protein PhnL
FOC83_11960	COG4107	phosphonate C-P lyase system protein PhnK
FOC83_11965	COG3627	carbon phosphorus lyase activity
FOC83_11970	COG3626	phosphonate metabolism
FOC83_11975	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
FOC83_11980	COG3624	Phosphonate C-P lyase system protein PhnG
FOC83_11985	COG2188	Transcriptional regulator
FOC83_11990	COG3454	Phosphonate metabolism
FOC83_11995	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FOC83_12000	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
FOC83_12005	COG0583	DNA-binding transcription factor activity
FOC83_12010	COG0405	Gamma-glutamyltransferase
FOC83_12025	COG3639	organic phosphonate transmembrane transporter activity
FOC83_12030	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
FOC83_12035	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC83_12045	COG0640	Transcriptional regulator
FOC83_12055	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOC83_12065	COG0739	heme binding
FOC83_12075	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC83_12085	COG0306	phosphate transporter
FOC83_12120	COG0625	glutathione transferase activity
FOC83_12140	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
FOC83_12145	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
FOC83_12160	COG0126	phosphoglycerate kinase activity
FOC83_12165	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
FOC83_12170	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
FOC83_12180	COG1385	rRNA (uridine-N3-)-methyltransferase activity
FOC83_12185	COG2732	(Barnase) inhibitor
FOC83_12195	COG0281	malic enzyme
FOC83_12195	COG0280	phosphate acetyltransferase
FOC83_12220	COG0741	lytic transglycosylase activity
FOC83_12225	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
FOC83_12240	COG4575	ribosome binding
FOC83_12250	COG1116	anion transmembrane transporter activity
FOC83_12255	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_12260	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC83_12265	COG1648	precorrin-2 dehydrogenase activity
FOC83_12265	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
FOC83_12270	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
FOC83_12275	COG2027	D-alanyl-D-alanine carboxypeptidase
FOC83_12290	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC83_12300	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
FOC83_12305	COG0343	queuine tRNA-ribosyltransferase activity
FOC83_12315	COG3077	Addiction module antitoxin, RelB DinJ family
FOC83_12320	COG1862	Preprotein translocase
FOC83_12325	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC83_12330	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC83_12350	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC83_12360	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC83_12365	COG1702	phosphate starvation-inducible protein PhoH
FOC83_12370	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
FOC83_12375	COG4535	Mg2 and Co2 transporter CorC
FOC83_12380	COG0815	Transfers the fatty acyl group on membrane lipoproteins
FOC83_12385	COG0667	Aldo Keto reductase
FOC83_12430	COG0697	spore germination
FOC83_12440	COG0678	peroxiredoxin activity
FOC83_12450	COG0412	Dienelactone hydrolase
FOC83_12460	COG0315	cyclic pyranopterin monophosphate synthase activity
FOC83_12470	COG0314	molybdopterin synthase activity
FOC83_12475	COG0521	Mo-molybdopterin cofactor biosynthetic process
FOC83_12480	COG0303	'Molybdopterin
FOC83_12490	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC83_12510	COG3383	formate dehydrogenase (NAD+) activity
FOC83_12515	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
FOC83_12525	COG2223	nitrite transmembrane transporter activity
FOC83_12550	COG0583	DNA-binding transcription factor activity
FOC83_12555	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
FOC83_12570	COG2205	protein histidine kinase activity
FOC83_12575	COG0745	RESPONSE REGULATOR receiver
FOC83_12590	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC83_12605	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_12625	COG2828	Protein conserved in bacteria
FOC83_12630	COG0583	DNA-binding transcription factor activity
FOC83_12635	COG0456	acetyltransferase
FOC83_12675	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_12700	COG4774	siderophore transport
FOC83_12720	COG4585	Histidine kinase
FOC83_12725	COG0671	phosphoesterase, PA-phosphatase related
FOC83_12740	COG1666	GTP binding
FOC83_12745	COG1120	ATPase activity
FOC83_12750	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_12755	COG4558	Periplasmic binding protein
FOC83_12760	COG3720	iron ion transport
FOC83_12770	COG3712	iron ion homeostasis
FOC83_12775	COG1595	DNA-templated transcription, initiation
FOC83_12790	COG2378	regulation of single-species biofilm formation
FOC83_12815	COG0583	DNA-binding transcription factor activity
FOC83_12820	COG1113	amino acid transport
FOC83_12830	COG1522	sequence-specific DNA binding
FOC83_12835	COG1272	protein, Hemolysin III
FOC83_12840	COG3191	aminopeptidase activity
FOC83_12845	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_12850	COG0765	amino acid transport
FOC83_12860	COG4942	peptidase
FOC83_12880	COG1999	signal sequence binding
FOC83_12900	COG4567	Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain
FOC83_12910	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC83_12915	COG1845	cytochrome c oxidase, subunit III
FOC83_12920	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FOC83_12930	COG4772	TonB-dependent receptor
FOC83_12950	COG0281	malic enzyme
FOC83_12950	COG0280	phosphate acetyltransferase
FOC83_12965	COG0697	spore germination
FOC83_13000	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_13010	COG0583	DNA-binding transcription factor activity
FOC83_13030	COG1396	sequence-specific DNA binding
FOC83_13035	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC83_13075	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FOC83_13080	COG1285	pathogenesis
FOC83_13085	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_13090	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC83_13105	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
FOC83_13120	COG3712	iron ion homeostasis
FOC83_13125	COG1595	DNA-templated transcription, initiation
FOC83_13135	COG4221	oxidoreductase activity
FOC83_13140	COG4773	Receptor
FOC83_13160	COG5001	Diguanylate cyclase
FOC83_13165	COG0330	HflC and HflK could
FOC83_13190	COG2807	transmembrane transport
FOC83_13195	COG2207	Transcriptional regulator
FOC83_13200	COG4106	trans-aconitate 2-methyltransferase activity
FOC83_13215	COG0583	DNA-binding transcription factor activity
FOC83_13245	COG3712	iron ion homeostasis
FOC83_13270	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
FOC83_13275	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_13280	COG0477	Major facilitator Superfamily
FOC83_13285	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
FOC83_13290	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC83_13295	COG1845	cytochrome c oxidase, subunit III
FOC83_13300	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
FOC83_13310	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_13315	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_13320	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_13330	COG2814	Major facilitator Superfamily
FOC83_13345	COG0625	glutathione transferase activity
FOC83_13400	COG3707	response regulator
FOC83_13405	COG2146	nitrite reductase [NAD(P)H] activity
FOC83_13405	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC83_13410	COG2146	nitrite reductase [NAD(P)H] activity
FOC83_13410	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
FOC83_13415	COG0243	molybdopterin cofactor binding
FOC83_13425	COG0667	Aldo Keto reductase
FOC83_13440	COG0656	L-ascorbic acid biosynthetic process
FOC83_13445	COG0583	DNA-binding transcription factor activity
FOC83_13450	COG0023	Translation Initiation Factor
FOC83_13460	COG0454	-acetyltransferase
FOC83_13460	COG0456	acetyltransferase
FOC83_13465	COG0583	DNA-binding transcription factor activity
FOC83_13470	COG4948	Mandelate Racemase Muconate Lactonizing
FOC83_13485	COG0840	transmembrane signaling receptor activity
FOC83_13490	COG2199	diguanylate cyclase activity
FOC83_13490	COG2203	Gaf domain
FOC83_13495	COG0640	Transcriptional regulator
FOC83_13505	COG0740	serine-type endopeptidase activity
FOC83_13510	COG2814	Major facilitator Superfamily
FOC83_13540	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_13550	COG0596	Alpha beta hydrolase
FOC83_13560	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC83_13570	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC83_13575	COG0583	DNA-binding transcription factor activity
FOC83_13610	COG0028	Belongs to the TPP enzyme family
FOC83_13630	COG1230	cation diffusion facilitator family transporter
FOC83_13650	COG1132	(ABC) transporter
FOC83_13665	COG1793	dna ligase
FOC83_13670	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
FOC83_13670	COG1793	dna ligase
FOC83_13710	COG1960	acyl-CoA dehydrogenase activity
FOC83_13720	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_13725	COG0697	spore germination
FOC83_13735	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_13745	COG0436	Aminotransferase
FOC83_13750	COG0583	DNA-binding transcription factor activity
FOC83_13755	COG0583	DNA-binding transcription factor activity
FOC83_13780	COG0583	DNA-binding transcription factor activity
FOC83_13785	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_13790	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_13795	COG4948	Mandelate Racemase Muconate Lactonizing
FOC83_13810	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_13855	COG1595	DNA-templated transcription, initiation
FOC83_13885	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
FOC83_13890	COG0459	protein refolding
FOC83_13900	COG1846	Transcriptional regulator
FOC83_13920	COG1917	Cupin 2, conserved barrel domain protein
FOC83_13945	COG1137	ATPase activity
FOC83_13955	COG0246	Mannitol dehydrogenase
FOC83_13960	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
FOC83_13965	COG1252	NADH dehydrogenase
FOC83_13970	COG0284	orotidine-5'-phosphate decarboxylase activity
FOC83_13975	COG1546	Belongs to the CinA family
FOC83_13990	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC83_13995	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
FOC83_14020	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
FOC83_14025	COG3639	organic phosphonate transmembrane transporter activity
FOC83_14030	COG3639	organic phosphonate transmembrane transporter activity
FOC83_14050	COG0742	ribosomal rna small subunit methyltransferase
FOC83_14055	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
FOC83_14060	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
FOC83_14065	COG3135	benzoate transporter
FOC83_14080	COG2814	Major facilitator Superfamily
FOC83_14100	COG4773	Receptor
FOC83_14105	COG4804	nuclease activity
FOC83_14135	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
FOC83_14140	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
FOC83_14155	COG0012	GTP binding
FOC83_14165	COG0193	aminoacyl-tRNA hydrolase activity
FOC83_14185	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
FOC83_14190	COG0840	transmembrane signaling receptor activity
FOC83_14205	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
FOC83_14230	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
FOC83_14240	COG0204	Acyl-transferase
FOC83_14245	COG1368	sulfuric ester hydrolase activity
FOC83_14250	COG2186	Transcriptional regulator
FOC83_14255	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC83_14265	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC83_14275	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC83_14290	COG0745	RESPONSE REGULATOR receiver
FOC83_14295	COG0277	FAD linked oxidase domain protein
FOC83_14310	COG0166	Belongs to the GPI family
FOC83_14315	COG0405	Gamma-glutamyltransferase
FOC83_14320	COG0438	transferase activity, transferring glycosyl groups
FOC83_14325	COG0438	transferase activity, transferring glycosyl groups
FOC83_14330	COG0438	transferase activity, transferring glycosyl groups
FOC83_14355	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
FOC83_14360	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC83_14390	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_14410	COG0747	negative chemotaxis
FOC83_14415	COG0601	transmembrane transport
FOC83_14420	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_14425	COG4172	Belongs to the ABC transporter superfamily
FOC83_14430	COG0154	amidase activity
FOC83_14470	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOC83_14470	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
FOC83_14475	COG0509	glycine decarboxylation via glycine cleavage system
FOC83_14480	COG0404	The glycine cleavage system catalyzes the degradation of glycine
FOC83_14495	COG2081	HI0933 family
FOC83_14500	COG1982	Orn Lys Arg decarboxylase major
FOC83_14515	COG3706	GGDEF domain
FOC83_14525	COG0717	Belongs to the dCTP deaminase family
FOC83_14540	COG0489	protein tyrosine kinase activity
FOC83_14550	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC83_14550	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC83_14570	COG2755	lipolytic protein G-D-S-L family
FOC83_14570	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FOC83_14585	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC83_14605	COG2200	EAL domain
FOC83_14625	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC83_14630	COG1129	ABC transporter
FOC83_14630	COG0842	Transport permease protein
FOC83_14635	COG0842	Transport permease protein
FOC83_14645	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_14650	COG0583	DNA-binding transcription factor activity
FOC83_14655	COG0697	spore germination
FOC83_14660	COG1271	oxidase subunit
FOC83_14665	COG1294	oxidase, subunit
FOC83_14675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_14710	COG3258	Cytochrome c
FOC83_14720	COG0625	glutathione transferase activity
FOC83_14730	COG1234	tRNA 3'-trailer cleavage
FOC83_14740	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FOC83_14755	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
FOC83_14780	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC83_14800	COG1595	DNA-templated transcription, initiation
FOC83_14805	COG3712	iron ion homeostasis
FOC83_14815	COG0165	Argininosuccinate lyase
FOC83_14820	COG2205	protein histidine kinase activity
FOC83_14830	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC83_14860	COG0477	Major facilitator Superfamily
FOC83_14870	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_14875	COG3246	L-lysine catabolic process to acetate
FOC83_14890	COG0820	rRNA (adenine-C2-)-methyltransferase activity
FOC83_14895	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC83_14900	COG0154	amidase activity
FOC83_14905	COG0372	Belongs to the citrate synthase family
FOC83_14910	COG4948	Mandelate Racemase Muconate Lactonizing
FOC83_14955	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC83_14960	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_14965	COG0583	DNA-binding transcription factor activity
FOC83_14970	COG0220	tRNA (guanine-N7-)-methyltransferase activity
FOC83_14990	COG1652	LysM domain
FOC83_14995	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
FOC83_15000	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC83_15015	COG0625	glutathione transferase activity
FOC83_15050	COG1012	belongs to the aldehyde dehydrogenase family
FOC83_15085	COG3550	peptidyl-serine autophosphorylation
FOC83_15105	COG1414	Transcriptional regulator
FOC83_15110	COG3734	2-keto-3-deoxy-galactonokinase
FOC83_15115	COG0800	Aldolase
FOC83_15120	COG4948	Mandelate Racemase Muconate Lactonizing
FOC83_15125	COG2271	Major facilitator Superfamily
FOC83_15130	COG1131	(ABC) transporter
FOC83_15145	COG4774	siderophore transport
FOC83_15150	COG2814	Major facilitator Superfamily
FOC83_15155	COG0326	Molecular chaperone. Has ATPase activity
FOC83_15165	COG2233	PERMEase
FOC83_15180	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_15185	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC83_15190	COG3246	L-lysine catabolic process to acetate
FOC83_15200	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_15310	COG2198	Histidine kinase
FOC83_15310	COG5002	protein histidine kinase activity
FOC83_15310	COG0784	Response regulator, receiver
FOC83_15330	COG0583	DNA-binding transcription factor activity
FOC83_15340	COG1695	Transcriptional regulator
FOC83_15355	COG0477	Major facilitator Superfamily
FOC83_15370	COG0277	FAD linked oxidase domain protein
FOC83_15380	COG3842	ATPase activity
FOC83_15385	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC83_15405	COG0628	permease
FOC83_15410	COG0583	DNA-binding transcription factor activity
FOC83_15415	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC83_15435	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
FOC83_15445	COG2186	Transcriptional regulator
FOC83_15455	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC83_15480	COG0410	ABC transporter
FOC83_15485	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_15490	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
FOC83_15500	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC83_15505	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC83_15510	COG0583	DNA-binding transcription factor activity
FOC83_15515	COG0129	dihydroxy-acid dehydratase activity
FOC83_15525	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC83_15530	COG0583	DNA-binding transcription factor activity
FOC83_15545	COG2200	EAL domain
FOC83_15550	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
FOC83_15555	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
FOC83_15560	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_15565	COG2031	fatty acid transporter
FOC83_15570	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_15575	COG1414	Transcriptional regulator
FOC83_15585	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC83_15590	COG4829	muconolactone delta-isomerase
FOC83_15600	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC83_15620	COG0288	reversible hydration of carbon dioxide
FOC83_15625	COG1802	Transcriptional regulator
FOC83_15630	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_15640	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_15660	COG0583	DNA-binding transcription factor activity
FOC83_15670	COG0583	DNA-binding transcription factor activity
FOC83_15675	COG0477	Major facilitator Superfamily
FOC83_15700	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_15720	COG1464	Belongs to the NlpA lipoprotein family
FOC83_15735	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
FOC83_15740	COG2890	protein-(glutamine-N5) methyltransferase activity
FOC83_15745	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
FOC83_15760	COG1280	lysine exporter protein (LysE YggA)
FOC83_15765	COG1522	sequence-specific DNA binding
FOC83_15785	COG3622	Belongs to the hyi family
FOC83_15805	COG0583	DNA-binding transcription factor activity
FOC83_15810	COG2186	Transcriptional regulator
FOC83_15815	COG3395	kinase activity
FOC83_15820	COG2084	Dehydrogenase
FOC83_15825	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC83_15830	COG3622	Belongs to the hyi family
FOC83_15835	COG0235	Class ii aldolase
FOC83_15955	COG3451	type IV secretory pathway VirB4
FOC83_15990	COG2948	multi-organism process
FOC83_16015	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
FOC83_16055	COG3133	Outer membrane lipoprotein
FOC83_16115	COG3593	DNA synthesis involved in DNA repair
FOC83_16120	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
FOC83_16135	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
FOC83_16150	COG0581	inorganic phosphate transmembrane transporter activity
FOC83_16155	COG0573	inorganic phosphate transmembrane transporter activity
FOC83_16160	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
FOC83_16190	COG0431	NADPH-dependent FMN reductase
FOC83_16215	COG4191	Histidine kinase
FOC83_16235	COG4654	Cytochrome c, class I
FOC83_16240	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
FOC83_16255	COG0789	Transcriptional regulator
FOC83_16260	COG2608	mercury ion transmembrane transporter activity
FOC83_16265	COG2608	mercury ion transmembrane transporter activity
FOC83_16275	COG0789	Transcriptional regulator
FOC83_16300	COG3220	belongs to the UPF0276 family
FOC83_16335	COG0785	Cytochrome C biogenesis protein
FOC83_16340	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC83_16350	COG0438	transferase activity, transferring glycosyl groups
FOC83_16365	COG0589	response to stress
FOC83_16370	COG0659	secondary active sulfate transmembrane transporter activity
FOC83_16375	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FOC83_16390	COG1185	polyribonucleotide nucleotidyltransferase activity
FOC83_16400	COG0459	protein refolding
FOC83_16415	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC83_16420	COG0659	secondary active sulfate transmembrane transporter activity
FOC83_16445	COG2433	Pfam Transposase IS66
FOC83_16495	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC83_16495	COG0551	DNA topoisomerase type I activity
FOC83_16550	COG0489	protein tyrosine kinase activity
FOC83_16560	COG0142	geranyltranstransferase activity
FOC83_16565	COG0261	This protein binds to 23S rRNA in the presence of protein L20
FOC83_16570	COG0211	Belongs to the bacterial ribosomal protein bL27 family
FOC83_16575	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
FOC83_16580	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
FOC83_16595	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
FOC83_16600	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
FOC83_16610	COG2186	Transcriptional regulator
FOC83_16615	COG3447	MASE1 domain protein
FOC83_16615	COG5001	Diguanylate cyclase
FOC83_16615	COG5002	protein histidine kinase activity
FOC83_16620	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
FOC83_16625	COG0793	Belongs to the peptidase S41A family
FOC83_16630	COG4942	peptidase
FOC83_16635	COG0588	phosphoglycerate mutase activity
FOC83_16645	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
FOC83_16650	COG1952	One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA
FOC83_16655	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
FOC83_16660	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_16670	COG1040	competence protein
FOC83_16675	COG2226	methyltransferase
FOC83_16680	COG2170	ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity
FOC83_16685	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
FOC83_16690	COG0569	domain protein
FOC83_16695	COG2204	response regulator
FOC83_16700	COG5000	phosphorelay sensor kinase activity
FOC83_16710	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
FOC83_16710	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
FOC83_16715	COG1280	lysine exporter protein (LysE YggA)
FOC83_16720	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
FOC83_16730	COG1733	regulation of RNA biosynthetic process
FOC83_16750	COG0546	phosphoglycolate phosphatase activity
FOC83_16760	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
FOC83_16765	COG0242	peptide deformylase activity
FOC83_16770	COG0758	DNA mediated transformation
FOC83_16785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_16790	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_16795	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
FOC83_16800	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_16815	COG1238	metal cluster binding
FOC83_16820	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC83_16825	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_16840	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
FOC83_16845	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
FOC83_16850	COG4988	ABC transporter
FOC83_16860	COG1294	oxidase, subunit
FOC83_16875	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
FOC83_16885	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
FOC83_16900	COG1137	ATPase activity
FOC83_16905	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
FOC83_16915	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
FOC83_16920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_16935	COG1660	Displays ATPase and GTPase activities
FOC83_16945	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC83_16955	COG0792	nuclease activity
FOC83_16960	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
FOC83_16970	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC83_16975	COG1464	Belongs to the NlpA lipoprotein family
FOC83_16980	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOC83_16990	COG1309	transcriptional regulator
FOC83_16995	COG0471	metal ion transport
FOC83_17000	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC83_17005	COG0772	Belongs to the SEDS family
FOC83_17010	COG0768	penicillin binding
FOC83_17020	COG1792	Involved in formation and maintenance of cell shape
FOC83_17025	COG1077	Cell shape determining protein MreB Mrl
FOC83_17030	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FOC83_17035	COG0154	amidase activity
FOC83_17040	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
FOC83_17055	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
FOC83_17060	COG0708	Exodeoxyribonuclease III
FOC83_17065	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC83_17075	COG0583	DNA-binding transcription factor activity
FOC83_17085	COG0583	DNA-binding transcription factor activity
FOC83_17110	COG1764	response to oxidative stress
FOC83_17115	COG1846	Transcriptional regulator
FOC83_17175	COG0640	Transcriptional regulator
FOC83_17205	COG3189	MarR family transcriptional regulator
FOC83_17225	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_17230	COG0351	phosphomethylpyrimidine kinase
FOC83_17230	COG0352	thiamine-phosphate diphosphorylase activity
FOC83_17230	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
FOC83_17240	COG0443	Heat shock 70 kDa protein
FOC83_17315	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
FOC83_17320	COG0513	Belongs to the DEAD box helicase family
FOC83_17330	COG0617	tRNA 3'-terminal CCA addition
FOC83_17340	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
FOC83_17345	COG2308	Evidence 4 Homologs of previously reported genes of
FOC83_17355	COG1305	Transglutaminase-like
FOC83_17375	COG1950	PFAM Membrane protein of
FOC83_17380	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
FOC83_17385	COG0438	transferase activity, transferring glycosyl groups
FOC83_17400	COG0066	3-isopropylmalate dehydratase activity
FOC83_17415	COG0583	DNA-binding transcription factor activity
FOC83_17425	COG0477	Major facilitator Superfamily
FOC83_17430	COG0154	amidase activity
FOC83_17435	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
FOC83_17450	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
FOC83_17460	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
FOC83_17465	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
FOC83_17475	COG0803	Belongs to the bacterial solute-binding protein 9 family
FOC83_17490	COG0735	belongs to the Fur family
FOC83_17495	COG0523	cobalamin synthesis protein
FOC83_17505	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
FOC83_17510	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
FOC83_17520	COG2096	Adenosyltransferase
FOC83_17525	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
FOC83_17540	COG0321	lipoyl(octanoyl) transferase activity
FOC83_17545	COG2921	Belongs to the UPF0250 family
FOC83_17555	COG1686	Belongs to the peptidase S11 family
FOC83_17580	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOC83_17590	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
FOC83_17605	COG0859	PFAM glycosyl transferase family 9
FOC83_17630	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC83_17665	COG0367	asparagine synthase
FOC83_17680	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC83_17690	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC83_17700	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
FOC83_17715	COG0175	sulfate reduction
FOC83_17745	COG2226	methyltransferase
FOC83_17760	COG0367	asparagine synthase
FOC83_17775	COG2814	Major facilitator Superfamily
FOC83_17780	COG0697	spore germination
FOC83_17805	COG3568	Endonuclease Exonuclease Phosphatase
FOC83_17810	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
FOC83_17835	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC83_17850	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_17855	COG1956	GAF domain-containing protein
FOC83_17860	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_17870	COG1422	Protein of unknown function (DUF1090)
FOC83_17885	COG2186	Transcriptional regulator
FOC83_17925	COG4106	trans-aconitate 2-methyltransferase activity
FOC83_17935	COG2814	Major facilitator Superfamily
FOC83_17945	COG0625	glutathione transferase activity
FOC83_17950	COG0232	Belongs to the dGTPase family. Type 2 subfamily
FOC83_17955	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
FOC83_17960	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
FOC83_17970	COG1965	Belongs to the frataxin family
FOC83_17980	COG0019	diaminopimelate decarboxylase activity
FOC83_17985	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
FOC83_17990	COG1333	cytochrome c biogenesis protein
FOC83_18000	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FOC83_18015	COG4232	protein-disulfide reductase activity
FOC83_18020	COG1324	tolerance protein
FOC83_18030	COG0203	ribosomal protein L17
FOC83_18035	COG0202	RNA polymerase activity
FOC83_18040	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
FOC83_18045	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
FOC83_18050	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
FOC83_18055	COG0257	Belongs to the bacterial ribosomal protein bL36 family
FOC83_18060	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
FOC83_18065	COG0201	protein transport
FOC83_18070	COG0200	Binds to the 23S rRNA
FOC83_18075	COG1841	ribosomal large subunit assembly
FOC83_18080	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
FOC83_18085	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
FOC83_18090	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
FOC83_18095	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
FOC83_18100	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
FOC83_18105	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
FOC83_18110	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
FOC83_18115	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
FOC83_18130	COG2169	Transcriptional regulator
FOC83_18130	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC83_18145	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC83_18165	COG4177	L-phenylalanine transmembrane transporter activity
FOC83_18185	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
FOC83_18190	COG0255	Belongs to the universal ribosomal protein uL29 family
FOC83_18195	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
FOC83_18200	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
FOC83_18205	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
FOC83_18210	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
FOC83_18215	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
FOC83_18220	COG0089	rRNA binding
FOC83_18230	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
FOC83_18235	COG0051	transcription antitermination factor activity, RNA binding
FOC83_18240	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOC83_18245	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOC83_18250	COG0049	tRNA binding
FOC83_18255	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
FOC83_18260	COG0745	RESPONSE REGULATOR receiver
FOC83_18275	COG5002	protein histidine kinase activity
FOC83_18290	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
FOC83_18295	COG0085	RNA polymerase activity
FOC83_18300	COG0222	ribosome binding
FOC83_18305	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
FOC83_18310	COG0081	regulation of translation
FOC83_18315	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
FOC83_18325	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC83_18335	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
FOC83_18375	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC83_18380	COG3842	ATPase activity
FOC83_18390	COG1349	DNA-binding transcription factor activity
FOC83_18415	COG0583	DNA-binding transcription factor activity
FOC83_18420	COG0252	asparaginase activity
FOC83_18425	COG1475	DNA binding
FOC83_18435	COG1192	Involved in chromosome partitioning
FOC83_18440	COG0357	Ribosomal RNA small subunit methyltransferase G
FOC83_18445	COG0445	tRNA wobble uridine modification
FOC83_18450	COG1278	Cold shock
FOC83_18455	COG3180	Ammonia monooxygenase
FOC83_18460	COG0436	Aminotransferase
FOC83_18490	COG0038	chloride channel
FOC83_18505	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
FOC83_18515	COG0601	transmembrane transport
FOC83_18520	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_18525	COG0444	Belongs to the ABC transporter superfamily
FOC83_18530	COG4608	Belongs to the ABC transporter superfamily
FOC83_18535	COG1473	amidohydrolase
FOC83_18540	COG2175	clavaminate synthase activity
FOC83_18550	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC83_18555	COG0753	catalase activity
FOC83_18565	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
FOC83_18570	COG0594	ribonuclease P activity
FOC83_18575	COG0230	Belongs to the bacterial ribosomal protein bL34 family
FOC83_18580	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
FOC83_18585	COG0592	DNA-directed DNA polymerase activity
FOC83_18595	COG2814	Major facilitator Superfamily
FOC83_18600	COG0583	DNA-binding transcription factor activity
FOC83_18605	COG0583	DNA-binding transcription factor activity
FOC83_18630	COG1574	metal-dependent hydrolase with the TIM-barrel fold
FOC83_18640	COG0583	DNA-binding transcription factor activity
FOC83_18645	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_18650	COG0765	amino acid transport
FOC83_18655	COG0765	amino acid transport
FOC83_18660	COG1126	abc transporter atp-binding protein
FOC83_18695	COG3842	ATPase activity
FOC83_18700	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC83_18705	COG1177	transmembrane transport
FOC83_18760	COG1609	Transcriptional regulator
FOC83_18770	COG3842	ATPase activity
FOC83_18775	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC83_18780	COG1177	transmembrane transport
FOC83_18805	COG0251	oxidation-reduction process
FOC83_18810	COG0402	S-adenosylhomocysteine deaminase activity
FOC83_18830	COG1744	ABC transporter substrate-binding protein PnrA-like
FOC83_18840	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
FOC83_18855	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC83_18870	COG2814	Major facilitator Superfamily
FOC83_18885	COG3781	membrane
FOC83_18890	COG1522	sequence-specific DNA binding
FOC83_18895	COG0028	Belongs to the TPP enzyme family
FOC83_18900	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_18905	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_18930	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC83_18935	COG2922	Belongs to the Smg family
FOC83_18945	COG2358	TRAP transporter, solute receptor (TAXI family
FOC83_18965	COG0765	amino acid transport
FOC83_18970	COG0765	amino acid transport
FOC83_18975	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_18980	COG3422	double-strand break repair
FOC83_18985	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_18990	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC83_19015	COG2814	Major facilitator Superfamily
FOC83_19025	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
FOC83_19035	COG3339	Conserved Protein
FOC83_19065	COG2186	Transcriptional regulator
FOC83_19070	COG2814	Major facilitator Superfamily
FOC83_19085	COG1595	DNA-templated transcription, initiation
FOC83_19090	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_19105	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_19155	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
FOC83_19160	COG0183	Belongs to the thiolase family
FOC83_19165	COG4579	[isocitrate dehydrogenase (NADP+)] phosphatase activity
FOC83_19170	COG1960	acyl-CoA dehydrogenase activity
FOC83_19175	COG1473	amidohydrolase
FOC83_19185	COG1742	UPF0060 membrane protein
FOC83_19200	COG1280	lysine exporter protein (LysE YggA)
FOC83_19225	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC83_19235	COG0018	arginyl-trna synthetase
FOC83_19250	COG0395	ABC-type sugar transport system, permease component
FOC83_19255	COG1175	transmembrane transport
FOC83_19260	COG1653	transport
FOC83_19270	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC83_19275	COG1609	Transcriptional regulator
FOC83_19285	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
FOC83_19300	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
FOC83_19320	COG0583	DNA-binding transcription factor activity
FOC83_19340	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
FOC83_19345	COG1280	lysine exporter protein (LysE YggA)
FOC83_19350	COG0513	Belongs to the DEAD box helicase family
FOC83_19355	COG5339	Protein conserved in bacteria
FOC83_19360	COG5339	Protein conserved in bacteria
FOC83_19365	COG1228	amidohydrolase
FOC83_19375	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_19380	COG0601	transmembrane transport
FOC83_19385	COG0747	negative chemotaxis
FOC83_19390	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FOC83_19400	COG3708	Transcriptional regulator
FOC83_19400	COG2207	Transcriptional regulator
FOC83_19410	COG1104	cysteine desulfurase activity
FOC83_19420	COG0583	DNA-binding transcription factor activity
FOC83_19450	COG2969	positive regulation of protein catabolic process
FOC83_19455	COG0625	glutathione transferase activity
FOC83_19460	COG2857	Cytochrome c1
FOC83_19465	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
FOC83_19470	COG0723	plastoquinol--plastocyanin reductase activity
FOC83_19475	COG1970	mechanosensitive ion channel activity
FOC83_19480	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
FOC83_19485	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC83_19500	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOC83_19505	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
FOC83_19510	COG0537	adenosine 5'-monophosphoramidase activity
FOC83_19515	COG0140	phosphoribosyl-ATP diphosphatase activity
FOC83_19520	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
FOC83_19525	COG0107	imidazoleglycerol-phosphate synthase activity
FOC83_19530	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
FOC83_19535	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
FOC83_19540	COG0131	Imidazoleglycerol-phosphate dehydratase
FOC83_19545	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC83_19550	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
FOC83_19555	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
FOC83_19560	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
FOC83_19570	COG0842	Transport permease protein
FOC83_19575	COG1131	(ABC) transporter
FOC83_19585	COG2853	Lipoprotein
FOC83_19590	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
FOC83_19595	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
FOC83_19600	COG1127	ABC transporter
FOC83_19605	COG2070	2-Nitropropane dioxygenase
FOC83_19615	COG0477	Major facilitator Superfamily
FOC83_19630	COG0583	DNA-binding transcription factor activity
FOC83_19635	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
FOC83_19640	COG0511	ligase activity, forming carbon-carbon bonds
FOC83_19655	COG1984	allophanate hydrolase subunit 2
FOC83_19670	COG0070	glutamate synthase
FOC83_19670	COG0069	glutamate synthase activity
FOC83_19670	COG0067	glutamate synthase
FOC83_19695	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC83_19715	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
FOC83_19725	COG1845	cytochrome c oxidase, subunit III
FOC83_19745	COG1612	heme a metabolic process
FOC83_19755	COG1999	signal sequence binding
FOC83_19775	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
FOC83_19780	COG2814	Major facilitator Superfamily
FOC83_19790	COG0438	transferase activity, transferring glycosyl groups
FOC83_19810	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
FOC83_19820	COG2814	Major facilitator Superfamily
FOC83_19835	COG4774	siderophore transport
FOC83_19840	COG4592	Periplasmic binding protein
FOC83_19845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_19850	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_19855	COG1120	ATPase activity
FOC83_19860	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC83_19875	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
FOC83_19900	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
FOC83_19905	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
FOC83_19910	COG2814	Major facilitator Superfamily
FOC83_19915	COG0583	DNA-binding transcription factor activity
FOC83_19925	COG2423	ornithine cyclodeaminase activity
FOC83_19930	COG0218	Necessary for normal cell division and for the maintenance of normal septation
FOC83_19935	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
FOC83_19945	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC83_19955	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FOC83_19960	COG0463	Glycosyl transferase, family 2
FOC83_20010	COG0737	Belongs to the 5'-nucleotidase family
FOC83_20025	COG2188	Transcriptional regulator
FOC83_20035	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
FOC83_20040	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
FOC83_20055	COG0840	transmembrane signaling receptor activity
FOC83_20060	COG2814	Major facilitator Superfamily
FOC83_20075	COG3188	usher protein
FOC83_20135	COG1802	Transcriptional regulator
FOC83_20145	COG3069	C4-dicarboxylate transmembrane transporter activity
FOC83_20175	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_20185	COG0747	negative chemotaxis
FOC83_20210	COG1464	Belongs to the NlpA lipoprotein family
FOC83_20215	COG0431	NADPH-dependent FMN reductase
FOC83_20220	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
FOC83_20225	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
FOC83_20230	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_20245	COG2011	ABC-type metal ion transport system permease component
FOC83_20250	COG1464	Belongs to the NlpA lipoprotein family
FOC83_20255	COG1116	anion transmembrane transporter activity
FOC83_20260	COG3585	molybdate ion transport
FOC83_20265	COG3064	Membrane
FOC83_20290	COG1607	acyl-coa hydrolase
FOC83_20305	COG0437	4 iron, 4 sulfur cluster binding
FOC83_20310	COG2864	formate dehydrogenase
FOC83_20325	COG3276	selenocysteine insertion sequence binding
FOC83_20335	COG1216	Glycosyl transferase, family 2
FOC83_20340	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC83_20345	COG1305	Transglutaminase-like
FOC83_20350	COG0709	Synthesizes selenophosphate from selenide and ATP
FOC83_20385	COG1012	belongs to the aldehyde dehydrogenase family
FOC83_20390	COG3284	Transcriptional regulator
FOC83_20395	COG0134	indole-3-glycerol-phosphate synthase activity
FOC83_20400	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
FOC83_20405	COG0512	Glutamine amidotransferase of anthranilate synthase
FOC83_20415	COG0546	phosphoglycolate phosphatase activity
FOC83_20420	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
FOC83_20425	COG2967	ApaG domain
FOC83_20435	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC83_20440	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC83_20450	COG0037	tRNA processing
FOC83_20480	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_20485	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_20500	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC83_20525	COG3473	Maleate cis-trans isomerase
FOC83_20530	COG0583	DNA-binding transcription factor activity
FOC83_20545	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
FOC83_20555	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC83_20560	COG1024	Enoyl-CoA hydratase
FOC83_20575	COG0356	it plays a direct role in the translocation of protons across the membrane
FOC83_20590	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
FOC83_20595	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
FOC83_20600	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
FOC83_20610	COG0355	proton-transporting ATP synthase activity, rotational mechanism
FOC83_20620	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
FOC83_20625	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
FOC83_20630	COG0210	DNA helicase
FOC83_20645	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
FOC83_20660	COG2171	N-acyltransferase activity
FOC83_20670	COG2195	Cleaves the N-terminal amino acid of tripeptides
FOC83_20680	COG4608	Belongs to the ABC transporter superfamily
FOC83_20685	COG0444	Belongs to the ABC transporter superfamily
FOC83_20695	COG0601	transmembrane transport
FOC83_20700	COG0747	negative chemotaxis
FOC83_20705	COG2988	succinylglutamate desuccinylase activity
FOC83_20715	COG0583	DNA-binding transcription factor activity
FOC83_20720	COG0747	negative chemotaxis
FOC83_20730	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
FOC83_20735	COG1024	Enoyl-CoA hydratase
FOC83_20740	COG1024	Enoyl-CoA hydratase
FOC83_20750	COG1309	transcriptional regulator
FOC83_20765	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_20780	COG2814	Major facilitator Superfamily
FOC83_20795	COG1764	response to oxidative stress
FOC83_20800	COG0583	DNA-binding transcription factor activity
FOC83_20810	COG1595	DNA-templated transcription, initiation
FOC83_20815	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC83_20820	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_20835	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC83_20855	COG1129	ABC transporter
FOC83_20870	COG1802	Transcriptional regulator
FOC83_20880	COG0583	DNA-binding transcription factor activity
FOC83_20890	COG2988	succinylglutamate desuccinylase activity
FOC83_20900	COG2918	glutathione biosynthetic process
FOC83_20930	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
FOC83_20935	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC83_20945	COG2721	sulfolactate sulfo-lyase activity
FOC83_20950	COG2721	sulfolactate sulfo-lyase activity
FOC83_20955	COG2188	Transcriptional regulator
FOC83_20960	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC83_20965	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
FOC83_20965	COG2813	Specifically methylates the guanine in position
FOC83_20970	COG2223	nitrite transmembrane transporter activity
FOC83_20980	COG2860	membrane
FOC83_20985	COG1802	Transcriptional regulator
FOC83_20995	COG1984	allophanate hydrolase subunit 2
FOC83_21000	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
FOC83_21010	COG0583	DNA-binding transcription factor activity
FOC83_21020	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC83_21035	COG2132	Multicopper oxidase
FOC83_21060	COG0745	RESPONSE REGULATOR receiver
FOC83_21065	COG2226	methyltransferase
FOC83_21080	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
FOC83_21090	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOC83_21100	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
FOC83_21105	COG0351	phosphomethylpyrimidine kinase
FOC83_21110	COG2022	thiamine diphosphate biosynthetic process
FOC83_21115	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
FOC83_21120	COG4771	TonB-dependent receptor
FOC83_21130	COG2186	Transcriptional regulator
FOC83_21145	COG1063	alcohol dehydrogenase
FOC83_21155	COG0765	amino acid transport
FOC83_21160	COG1126	abc transporter atp-binding protein
FOC83_21165	COG4948	Mandelate Racemase Muconate Lactonizing
FOC83_21170	COG0246	Mannitol dehydrogenase
FOC83_21185	COG1194	a g-specific adenine glycosylase
FOC83_21210	COG2177	Part of the ABC transporter FtsEX involved in
FOC83_21215	COG2884	Cell division ATP-binding protein ftsE
FOC83_21220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_21225	COG4597	amino acid ABC transporter
FOC83_21230	COG0765	amino acid transport
FOC83_21235	COG1126	abc transporter atp-binding protein
FOC83_21260	COG1129	ABC transporter
FOC83_21265	COG4177	L-phenylalanine transmembrane transporter activity
FOC83_21280	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC83_21285	COG2081	HI0933 family
FOC83_21295	COG1605	Chorismate mutase
FOC83_21295	COG0077	Prephenate dehydratase
FOC83_21330	COG0477	Major facilitator Superfamily
FOC83_21340	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
FOC83_21345	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
FOC83_21365	COG0237	dephospho-CoA kinase activity
FOC83_21370	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
FOC83_21400	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_21405	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC83_21420	COG3833	ABC-type maltose transport systems, permease component
FOC83_21425	COG1175	transmembrane transport
FOC83_21430	COG3842	ATPase activity
FOC83_21450	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
FOC83_21485	COG0410	ABC transporter
FOC83_21505	COG3706	GGDEF domain
FOC83_21520	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_21525	COG1024	Enoyl-CoA hydratase
FOC83_21565	COG4638	Rieske (2fe-2S)
FOC83_21570	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FOC83_21575	COG1335	isochorismatase
FOC83_21580	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_21590	COG0741	lytic transglycosylase activity
FOC83_21595	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
FOC83_21600	COG0352	thiamine-phosphate diphosphorylase activity
FOC83_21615	COG1678	Uncharacterized ACR, COG1678
FOC83_21620	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
FOC83_21645	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC83_21650	COG0436	Aminotransferase
FOC83_21655	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_21665	COG0765	amino acid transport
FOC83_21670	COG1126	abc transporter atp-binding protein
FOC83_21675	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC83_21685	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
FOC83_21690	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
FOC83_21700	COG3842	ATPase activity
FOC83_21705	COG1175	transmembrane transport
FOC83_21715	COG0642	Histidine kinase
FOC83_21725	COG0557	exoribonuclease II activity
FOC83_21730	COG3150	esterase
FOC83_21735	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOC83_21740	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC83_21745	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
FOC83_21750	COG0511	ligase activity, forming carbon-carbon bonds
FOC83_21755	COG0439	Biotin carboxylase
FOC83_21760	COG2264	protein methyltransferase activity
FOC83_21770	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
FOC83_21770	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOC83_21795	COG1696	Membrane protein involved in D-alanine export
FOC83_21830	COG1522	sequence-specific DNA binding
FOC83_21835	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_21845	COG0583	DNA-binding transcription factor activity
FOC83_21860	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC83_21865	COG0045	succinate-CoA ligase (ADP-forming) activity
FOC83_21865	COG1042	CoA-binding domain protein
FOC83_21865	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC83_21870	COG1335	isochorismatase
FOC83_21875	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
FOC83_21880	COG1116	anion transmembrane transporter activity
FOC83_21895	COG3028	Belongs to the UPF0307 family
FOC83_21900	COG0312	modulator of DNA gyrase
FOC83_21905	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC83_21920	COG4177	L-phenylalanine transmembrane transporter activity
FOC83_21935	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
FOC83_21940	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
FOC83_21945	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
FOC83_21955	COG0316	Belongs to the HesB IscA family
FOC83_21970	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
FOC83_21985	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
FOC83_21990	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
FOC83_22005	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC83_22005	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
FOC83_22020	COG2766	serine protein kinase
FOC83_22025	COG2718	Belongs to the UPF0229 family
FOC83_22030	COG2719	SpoVR family
FOC83_22040	COG0583	DNA-binding transcription factor activity
FOC83_22045	COG1942	4-Oxalocrotonate Tautomerase
FOC83_22055	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
FOC83_22065	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_22085	COG2208	phosphoserine phosphatase activity
FOC83_22085	COG2770	Histidine kinase
FOC83_22095	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
FOC83_22100	COG2172	sigma factor antagonist activity
FOC83_22105	COG1366	Belongs to the anti-sigma-factor antagonist family
FOC83_22145	COG1388	LysM domain
FOC83_22145	COG0741	lytic transglycosylase activity
FOC83_22150	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
FOC83_22155	COG2226	methyltransferase
FOC83_22160	COG0328	RNA-DNA hybrid ribonuclease activity
FOC83_22170	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC83_22175	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
FOC83_22190	COG1671	Belongs to the UPF0178 family
FOC83_22205	COG0786	glutamate:sodium symporter activity
FOC83_22215	COG0463	Glycosyl transferase, family 2
FOC83_22220	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
FOC83_22235	COG0583	DNA-binding transcription factor activity
FOC83_22255	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_22275	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_22285	COG0583	DNA-binding transcription factor activity
FOC83_22295	COG1346	cytolysis
FOC83_22305	COG0697	spore germination
FOC83_22310	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_22325	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
FOC83_22335	COG1522	sequence-specific DNA binding
FOC83_22350	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
FOC83_22355	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_22370	COG0823	Involved in the tonB-independent uptake of proteins
FOC83_22380	COG0848	biopolymer transport protein
FOC83_22385	COG0811	peptide transport
FOC83_22390	COG0824	Thioesterase
FOC83_22395	COG0442	prolyl-tRNA aminoacylation
FOC83_22425	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC83_22440	COG2084	Dehydrogenase
FOC83_22445	COG0405	Gamma-glutamyltransferase
FOC83_22485	COG0129	dihydroxy-acid dehydratase activity
FOC83_22490	COG4654	Cytochrome c, class I
FOC83_22495	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC83_22505	COG1522	sequence-specific DNA binding
FOC83_22545	COG0583	DNA-binding transcription factor activity
FOC83_22555	COG1473	amidohydrolase
FOC83_22560	COG0418	dihydroorotase activity
FOC83_22575	COG2001	Belongs to the MraZ family
FOC83_22580	COG0275	rRNA processing
FOC83_22585	COG3116	cell division
FOC83_22595	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC83_22600	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
FOC83_22605	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
FOC83_22615	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
FOC83_22620	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
FOC83_22625	COG1181	Belongs to the D-alanine--D-alanine ligase family
FOC83_22630	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
FOC83_22640	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
FOC83_22645	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
FOC83_22655	COG0739	heme binding
FOC83_22660	COG0653	protein targeting
FOC83_22680	COG0028	Belongs to the TPP enzyme family
FOC83_22690	COG0300	oxidoreductase activity
FOC83_22695	COG1522	sequence-specific DNA binding
FOC83_22710	COG2239	Acts as a magnesium transporter
FOC83_22720	COG2855	membrane
FOC83_22725	COG0583	DNA-binding transcription factor activity
FOC83_22730	COG1473	amidohydrolase
FOC83_22735	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_22740	COG0483	inositol monophosphate 1-phosphatase activity
FOC83_22745	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_22745	COG4121	Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34
FOC83_22750	COG1501	Belongs to the glycosyl hydrolase 31 family
FOC83_22755	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
FOC83_22760	COG2011	ABC-type metal ion transport system permease component
FOC83_22775	COG1595	DNA-templated transcription, initiation
FOC83_22780	COG3712	iron ion homeostasis
FOC83_22800	COG0840	transmembrane signaling receptor activity
FOC83_22805	COG0583	DNA-binding transcription factor activity
FOC83_22815	COG0735	belongs to the Fur family
FOC83_22840	COG2818	Glycosylase
FOC83_22845	COG1368	sulfuric ester hydrolase activity
FOC83_22850	COG2982	Protein involved in outer membrane biogenesis
FOC83_22865	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_22900	COG2154	pterin-4-alpha-carbinolamine dehydratase
FOC83_22915	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC83_22930	COG3178	'Phosphotransferase
FOC83_22940	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC83_22945	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
FOC83_22950	COG1929	Belongs to the glycerate kinase type-1 family
FOC83_22955	COG0469	pyruvate kinase activity
FOC83_22960	COG0700	Nucleoside recognition
FOC83_22965	COG1960	acyl-CoA dehydrogenase activity
FOC83_22970	COG0242	peptide deformylase activity
FOC83_22990	COG0204	Acyl-transferase
FOC83_22995	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
FOC83_23000	COG0751	glycine-tRNA ligase activity
FOC83_23005	COG0752	glycyl-tRNA synthetase alpha subunit
FOC83_23010	COG1024	Enoyl-CoA hydratase
FOC83_23030	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_23035	COG2030	dehydratase
FOC83_23040	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_23055	COG2070	2-Nitropropane dioxygenase
FOC83_23065	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_23070	COG0183	Belongs to the thiolase family
FOC83_23080	COG1960	acyl-CoA dehydrogenase activity
FOC83_23090	COG1024	Enoyl-CoA hydratase
FOC83_23100	COG3777	bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding
FOC83_23110	COG2301	Belongs to the HpcH HpaI aldolase family
FOC83_23115	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
FOC83_23125	COG0617	tRNA 3'-terminal CCA addition
FOC83_23140	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
FOC83_23150	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
FOC83_23155	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
FOC83_23160	COG0586	Pfam SNARE associated Golgi protein
FOC83_23170	COG0860	N-Acetylmuramoyl-L-alanine amidase
FOC83_23175	COG0802	atpase or kinase
FOC83_23180	COG0114	fumarate hydratase activity
FOC83_23190	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_23205	COG0531	amino acid
FOC83_23210	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_23220	COG1960	acyl-CoA dehydrogenase activity
FOC83_23225	COG0583	DNA-binding transcription factor activity
FOC83_23230	COG0179	Fumarylacetoacetate (FAA) hydrolase
FOC83_23240	COG1304	FMN binding
FOC83_23250	COG2175	clavaminate synthase activity
FOC83_23260	COG0583	DNA-binding transcription factor activity
FOC83_23270	COG0579	oxidoreductase
FOC83_23280	COG0259	pyridoxamine-phosphate oxidase activity
FOC83_23295	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC83_23300	COG1136	(ABC) transporter
FOC83_23300	COG0577	efflux transmembrane transporter activity
FOC83_23305	COG1538	Outer membrane efflux protein
FOC83_23310	COG0583	DNA-binding transcription factor activity
FOC83_23330	COG1136	(ABC) transporter
FOC83_23330	COG0577	efflux transmembrane transporter activity
FOC83_23360	COG1136	(ABC) transporter
FOC83_23360	COG0577	efflux transmembrane transporter activity
FOC83_23370	COG1566	PFAM secretion protein HlyD family protein
FOC83_23375	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
FOC83_23415	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
FOC83_23425	COG0800	Aldolase
FOC83_23440	COG1216	Glycosyl transferase, family 2
FOC83_23440	COG0463	Glycosyl transferase, family 2
FOC83_23465	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_23470	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FOC83_23490	COG5517	Aromatic-ring-hydroxylating dioxygenase beta subunit
FOC83_23495	COG4638	Rieske (2fe-2S)
FOC83_23520	COG0747	negative chemotaxis
FOC83_23530	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_23535	COG0444	Belongs to the ABC transporter superfamily
FOC83_23540	COG4608	Belongs to the ABC transporter superfamily
FOC83_23560	COG2746	aminoglycoside 3-N-acetyltransferase activity
FOC83_23565	COG0488	(ABC) transporter
FOC83_23590	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
FOC83_23595	COG2894	cell division
FOC83_23600	COG0850	regulation of cytokinetic process
FOC83_23605	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
FOC83_23615	COG1294	oxidase, subunit
FOC83_23620	COG0514	ATP-dependent DNA helicase (RecQ)
FOC83_23630	COG0745	RESPONSE REGULATOR receiver
FOC83_23635	COG4191	Histidine kinase
FOC83_23640	COG2255	four-way junction helicase activity
FOC83_23650	COG1090	epimerase
FOC83_23655	COG0632	four-way junction helicase activity
FOC83_23680	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
FOC83_23690	COG0006	proline dipeptidase activity
FOC83_23705	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
FOC83_23710	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_23725	COG4783	chaperone-mediated protein folding
FOC83_23765	COG2814	Major facilitator Superfamily
FOC83_23770	COG4771	TonB-dependent receptor
FOC83_23780	COG0513	Belongs to the DEAD box helicase family
FOC83_23795	COG1058	Belongs to the CinA family
FOC83_23795	COG1546	Belongs to the CinA family
FOC83_23800	COG1414	Transcriptional regulator
FOC83_23815	COG0167	dihydroorotate dehydrogenase activity
FOC83_23820	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
FOC83_23825	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
FOC83_23915	COG0629	single-stranded DNA binding
FOC83_23920	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
FOC83_23935	COG0789	Transcriptional regulator
FOC83_23945	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
FOC83_23990	COG0789	Transcriptional regulator
FOC83_24060	COG3344	reverse transcriptase
FOC83_24085	COG3344	reverse transcriptase
FOC83_24180	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC83_24185	COG1569	PIN domain
FOC83_24190	COG3311	Transcriptional regulator
FOC83_24305	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
FOC83_24320	COG0024	Methionine aminopeptidase
FOC83_24340	COG2807	transmembrane transport
FOC83_24355	COG4771	TonB-dependent receptor
FOC83_24385	COG1131	(ABC) transporter
FOC83_24395	COG0019	diaminopimelate decarboxylase activity
FOC83_24410	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC83_24415	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
FOC83_24425	COG4774	siderophore transport
FOC83_24485	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
FOC83_24490	COG0640	Transcriptional regulator
FOC83_24520	COG4771	TonB-dependent receptor
FOC83_24535	COG2814	Major facilitator Superfamily
FOC83_24545	COG4106	trans-aconitate 2-methyltransferase activity
FOC83_24585	COG2226	methyltransferase
FOC83_24585	COG3433	isochorismatase activity
FOC83_24585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC83_24605	COG1021	2,3-dihydroxybenzoate-AMP ligase
FOC83_24615	COG0583	DNA-binding transcription factor activity
FOC83_24620	COG0582	viral genome integration into host DNA
FOC83_24645	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC83_24650	COG0735	belongs to the Fur family
FOC83_24655	COG0497	DNA recombination
FOC83_24665	COG1420	regulation of RNA biosynthetic process
FOC83_24670	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
FOC83_24680	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
FOC83_24690	COG0443	Heat shock 70 kDa protein
FOC83_24695	COG0484	heat shock protein binding
FOC83_24705	COG0612	Peptidase, M16
FOC83_24730	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
FOC83_24765	COG0840	transmembrane signaling receptor activity
FOC83_24770	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_24785	COG0745	RESPONSE REGULATOR receiver
FOC83_24790	COG2205	protein histidine kinase activity
FOC83_24795	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
FOC83_24800	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
FOC83_24805	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
FOC83_24820	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
FOC83_24830	COG1193	negative regulation of DNA recombination
FOC83_24835	COG0492	ferredoxin-NADP+ reductase activity
FOC83_24840	COG1674	ftsk spoiiie
FOC83_24845	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
FOC83_24850	COG0251	oxidation-reduction process
FOC83_24855	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
FOC83_24860	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
FOC83_24860	COG0517	IMP dehydrogenase activity
FOC83_24880	COG0601	transmembrane transport
FOC83_24895	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC83_24900	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
FOC83_24905	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
FOC83_24945	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
FOC83_24955	COG4774	siderophore transport
FOC83_24960	COG4607	ABC-type enterochelin transport system periplasmic component
FOC83_24965	COG4604	ABC transporter, ATP-binding protein
FOC83_24970	COG4605	iron ion homeostasis
FOC83_24975	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
FOC83_25005	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_25010	COG3022	response to hydroperoxide
FOC83_25015	COG1289	transmembrane transporter activity
FOC83_25020	COG0028	Belongs to the TPP enzyme family
FOC83_25025	COG0440	acetolactate synthase activity
FOC83_25030	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
FOC83_25035	COG1183	phosphatidylcholine synthase activity
FOC83_25045	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
FOC83_25050	COG1185	polyribonucleotide nucleotidyltransferase activity
FOC83_25060	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
FOC83_25070	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
FOC83_25080	COG2207	Transcriptional regulator
FOC83_25105	COG0149	triose-phosphate isomerase activity
FOC83_25110	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
FOC83_25125	COG3047	cAMP biosynthetic process
FOC83_25125	COG2885	chlorophyll binding
FOC83_25150	COG0840	transmembrane signaling receptor activity
FOC83_25170	COG1910	domain protein
FOC83_25205	COG1116	anion transmembrane transporter activity
FOC83_25220	COG1595	DNA-templated transcription, initiation
FOC83_25225	COG3712	iron ion homeostasis
FOC83_25245	COG0642	Histidine kinase
FOC83_25255	COG2851	Citrate transporter
FOC83_25260	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_25280	COG1210	Utp--glucose-1-phosphate uridylyltransferase
FOC83_25285	COG4191	Histidine kinase
FOC83_25285	COG0784	Response regulator, receiver
FOC83_25300	COG3604	Transcriptional regulator
FOC83_25305	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
FOC83_25310	COG3813	Protein conserved in bacteria
FOC83_25315	COG2354	Protein conserved in bacteria
FOC83_25320	COG4772	TonB-dependent receptor
FOC83_25325	COG1522	sequence-specific DNA binding
FOC83_25345	COG4172	Belongs to the ABC transporter superfamily
FOC83_25355	COG0747	negative chemotaxis
FOC83_25375	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC83_25380	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC83_25390	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
FOC83_25395	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC83_25400	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC83_25420	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
FOC83_25430	COG1309	transcriptional regulator
FOC83_25435	COG0583	DNA-binding transcription factor activity
FOC83_25455	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
FOC83_25480	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
FOC83_25485	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC83_25490	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC83_25495	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC83_25500	COG0649	NAD binding
FOC83_25505	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
FOC83_25515	COG1034	ATP synthesis coupled electron transport
FOC83_25520	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
FOC83_25525	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
FOC83_25535	COG0713	ATP synthesis coupled electron transport
FOC83_25550	COG1007	ATP synthesis coupled electron transport
FOC83_25560	COG4774	siderophore transport
FOC83_25565	COG4774	siderophore transport
FOC83_25570	COG0560	Phosphoserine phosphatase
FOC83_25575	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
FOC83_25580	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
FOC83_25585	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
FOC83_25595	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
FOC83_25600	COG0450	alkyl hydroperoxide reductase
FOC83_25605	COG2205	protein histidine kinase activity
FOC83_25610	COG0745	RESPONSE REGULATOR receiver
FOC83_25615	COG1214	PFAM Peptidase M22, glycoprotease
FOC83_25620	COG1573	uracil-dna glycosylase
FOC83_25625	COG0477	Major facilitator Superfamily
FOC83_25630	COG1196	nuclear chromosome segregation
FOC83_25640	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
FOC83_25645	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
FOC83_25655	COG2917	probably involved in intracellular septation
FOC83_25660	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
FOC83_25665	COG1122	ATPase activity
FOC83_25670	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
FOC83_25675	COG1268	BioY protein
FOC83_25710	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
FOC83_25745	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
FOC83_25750	COG2878	Part of a membrane complex involved in electron transport
FOC83_25765	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
FOC83_25770	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
FOC83_25775	COG0251	oxidation-reduction process
FOC83_25785	COG3228	Belongs to the MtfA family
FOC83_25790	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
FOC83_25800	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC83_25810	COG0159	tryptophan synthase activity
FOC83_25815	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
FOC83_25820	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
FOC83_25825	COG1530	ribonuclease E activity
FOC83_25830	COG0564	pseudouridine synthase activity
FOC83_25835	COG0546	phosphoglycolate phosphatase activity
FOC83_25840	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
FOC83_25845	COG2717	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain
FOC83_25860	COG0424	maF-like protein
FOC83_25870	COG0333	Belongs to the bacterial ribosomal protein bL32 family
FOC83_25880	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
FOC83_25885	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
FOC83_25895	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC83_25900	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC83_25925	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC83_25930	COG0481	GTPase activity
FOC83_25935	COG0681	Belongs to the peptidase S26 family
FOC83_25940	COG0571	ribonuclease III activity
FOC83_25945	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
FOC83_25950	COG1381	Involved in DNA repair and RecF pathway recombination
FOC83_26000	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
FOC83_26025	COG0583	DNA-binding transcription factor activity
FOC83_26035	COG0791	NLP P60 protein
FOC83_26045	COG3193	protein, possibly involved in utilization of glycolate and propanediol
FOC83_26055	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC83_26060	COG0697	spore germination
FOC83_26065	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
FOC83_26090	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC83_26115	COG2153	protein acetylation
FOC83_26125	COG1446	asparaginase
FOC83_26130	COG4172	Belongs to the ABC transporter superfamily
FOC83_26135	COG0747	negative chemotaxis
FOC83_26170	COG0504	CTP synthase activity
FOC83_26180	COG0148	phosphopyruvate hydratase activity
FOC83_26195	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
FOC83_26205	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC83_26260	COG0039	L-malate dehydrogenase activity
FOC83_26265	COG2188	Transcriptional regulator
FOC83_26270	COG2009	succinate dehydrogenase
FOC83_26275	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
FOC83_26280	COG1053	succinate dehydrogenase
FOC83_26285	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
FOC83_26290	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
FOC83_26295	COG0372	Belongs to the citrate synthase family
FOC83_26310	COG0281	malic enzyme
FOC83_26310	COG0280	phosphate acetyltransferase
FOC83_26320	COG1297	OPT oligopeptide transporter protein
FOC83_26325	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
FOC83_26340	COG2515	1-aminocyclopropane-1-carboxylate deaminase
FOC83_26345	COG1522	sequence-specific DNA binding
FOC83_26350	COG0567	Dehydrogenase, E1 component
FOC83_26355	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC83_26360	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC83_26365	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
FOC83_26370	COG1595	DNA-templated transcription, initiation
FOC83_26375	COG3712	iron ion homeostasis
FOC83_26380	COG4774	siderophore transport
FOC83_26415	COG2183	response to ionizing radiation
FOC83_26420	COG1199	ATP-dependent helicase activity
FOC83_26430	COG0564	pseudouridine synthase activity
FOC83_26440	COG3243	poly(R)-hydroxyalkanoic acid synthase
FOC83_26445	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_26450	COG5394	Polyhydroxyalkanoate synthesis repressor PhaR
FOC83_26475	COG2831	hemolysin activation secretion protein
FOC83_26505	COG2823	Periplasmic or secreted lipoprotein
FOC83_26515	COG3237	CsbD-like
FOC83_26520	COG0189	ligase activity
FOC83_26520	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC83_26525	COG0189	ligase activity
FOC83_26525	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
FOC83_26530	COG1132	(ABC) transporter
FOC83_26545	COG2833	Protein of unknown function (DUF455)
FOC83_26550	COG2258	MOSC domain
FOC83_26555	COG2951	lytic endotransglycosylase activity
FOC83_26570	COG1960	acyl-CoA dehydrogenase activity
FOC83_26580	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
FOC83_26590	COG1696	Membrane protein involved in D-alanine export
FOC83_26610	COG1215	transferase activity, transferring glycosyl groups
FOC83_26620	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
FOC83_26645	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
FOC83_26660	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
FOC83_26670	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC83_26680	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
FOC83_26685	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
FOC83_26705	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
FOC83_26710	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
FOC83_26715	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
FOC83_26745	COG2951	lytic endotransglycosylase activity
FOC83_26750	COG0123	including yeast histone deacetylase and acetoin utilization protein
FOC83_26775	COG2985	domain, Protein
FOC83_26780	COG1960	acyl-CoA dehydrogenase activity
FOC83_26785	COG0450	alkyl hydroperoxide reductase
FOC83_26795	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
FOC83_26800	COG4208	sulfate ABC transporter
FOC83_26810	COG0175	sulfate reduction
FOC83_26840	COG0335	large ribosomal subunit rRNA binding
FOC83_26845	COG0494	nUDIX hydrolase
FOC83_26850	COG1162	GTPase activity
FOC83_26855	COG0501	Belongs to the peptidase M48B family
FOC83_26860	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
FOC83_26865	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
FOC83_26870	COG3327	negative regulation of DNA-templated transcription, initiation
FOC83_26875	COG3396	Phenylacetate-CoA oxygenase
FOC83_26880	COG3460	Phenylacetate-CoA oxygenase
FOC83_26885	COG3396	Phenylacetate-CoA oxygenase
FOC83_26890	COG2151	metal-sulfur cluster biosynthetic enzyme
FOC83_26895	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
FOC83_26900	COG1012	belongs to the aldehyde dehydrogenase family
FOC83_26905	COG1024	Enoyl-CoA hydratase
FOC83_26910	COG2050	protein possibly involved in aromatic compounds catabolism
FOC83_26920	COG0534	Mate efflux family protein
FOC83_26935	COG3483	tryptophan 2,3-dioxygenase activity
FOC83_26940	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
FOC83_26945	COG2003	Belongs to the UPF0758 family
FOC83_26955	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
FOC83_26960	COG0625	glutathione transferase activity
FOC83_26965	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
FOC83_26970	COG0642	Histidine kinase
FOC83_26990	COG0523	cobalamin synthesis protein
FOC83_26995	COG0523	cobalamin synthesis protein
FOC83_27000	COG0583	DNA-binding transcription factor activity
FOC83_27015	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
FOC83_27020	COG1187	pseudouridine synthase activity
FOC83_27025	COG0779	Required for maturation of 30S ribosomal subunits
FOC83_27030	COG2251	uridine kinase activity
FOC83_27030	COG0195	Participates in both transcription termination and antitermination
FOC83_27035	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
FOC83_27040	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
FOC83_27045	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
FOC83_27070	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_27075	COG1473	amidohydrolase
FOC83_27080	COG1611	Belongs to the LOG family
FOC83_27095	COG0412	Dienelactone hydrolase
FOC83_27105	COG1760	l-serine dehydratase
FOC83_27110	COG0501	Belongs to the peptidase M48B family
FOC83_27130	COG0583	DNA-binding transcription factor activity
FOC83_27135	COG3842	ATPase activity
FOC83_27145	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
FOC83_27150	COG1840	ABC-type Fe3 transport system, periplasmic component
FOC83_27170	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_27180	COG1722	exodeoxyribonuclease VII activity
FOC83_27185	COG0142	geranyltranstransferase activity
FOC83_27195	COG1469	GTP cyclohydrolase I activity
FOC83_27200	COG3739	integral membrane protein
FOC83_27205	COG0360	Binds together with S18 to 16S ribosomal RNA
FOC83_27210	COG2965	DNA replication, synthesis of RNA primer
FOC83_27215	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
FOC83_27220	COG0359	binds to the 23S rRNA
FOC83_27230	COG0305	Participates in initiation and elongation during chromosome replication
FOC83_27240	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOC83_27275	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
FOC83_27325	COG0540	Belongs to the ATCase OTCase family
FOC83_27350	COG0642	Histidine kinase
FOC83_27360	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
FOC83_27365	COG2137	regulation of response to DNA damage stimulus
FOC83_27390	COG0045	succinate-CoA ligase (ADP-forming) activity
FOC83_27395	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
FOC83_27400	COG0861	Integral membrane protein TerC family
FOC83_27405	COG0861	Integral membrane protein TerC family
FOC83_27410	COG0181	hydroxymethylbilane synthase activity
FOC83_27430	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
FOC83_27440	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_27470	COG0559	Belongs to the binding-protein-dependent transport system permease family
FOC83_27490	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
FOC83_27495	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC83_27505	COG0436	Aminotransferase
FOC83_27525	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
FOC83_27530	COG0308	aminopeptidase N
FOC83_27545	COG0312	modulator of DNA gyrase
FOC83_27550	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
FOC83_27555	COG0277	FAD linked oxidase domain protein
FOC83_27560	COG0277	FAD linked oxidase domain protein
FOC83_27565	COG0277	FAD linked oxidase domain protein
FOC83_27570	COG0247	lactate metabolic process
FOC83_27600	COG0583	DNA-binding transcription factor activity
FOC83_27605	COG0482	sulfurtransferase activity
FOC83_27610	COG0730	response to heat
FOC83_27615	COG0625	glutathione transferase activity
FOC83_27625	COG3909	cytochrome
FOC83_27665	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
FOC83_27780	COG0697	spore germination
FOC83_27815	COG4301	Catalyzes the SAM-dependent triple methylation of the alpha-amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine
FOC83_27825	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
FOC83_27830	COG0069	glutamate synthase activity
FOC83_27835	COG2391	methyltransferase activity
FOC83_27840	COG0679	Auxin Efflux Carrier
FOC83_27870	COG0557	exoribonuclease II activity
FOC83_27875	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC83_27885	COG3128	pkhd-type hydroxylase
FOC83_27890	COG0776	regulation of translation
FOC83_27915	COG0745	RESPONSE REGULATOR receiver
FOC83_27920	COG0642	Histidine kinase
FOC83_27925	COG3158	transport of potassium into the cell
FOC83_27930	COG0137	argininosuccinate synthase activity
FOC83_27935	COG0583	DNA-binding transcription factor activity
FOC83_27940	COG3618	amidohydrolase
FOC83_27960	COG0596	Alpha beta hydrolase
FOC83_27960	COG2945	thiolester hydrolase activity
FOC83_27965	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
FOC83_27970	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
FOC83_27990	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC83_27995	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
FOC83_28005	COG3642	lipopolysaccharide core region biosynthetic process
FOC83_28015	COG3842	ATPase activity
FOC83_28020	COG1176	ABC-type spermidine putrescine transport system, permease component I
FOC83_28025	COG1177	transmembrane transport
FOC83_28045	COG1322	Protein conserved in bacteria
FOC83_28055	COG1960	acyl-CoA dehydrogenase activity
FOC83_28065	COG0704	Plays a role in the regulation of phosphate uptake
FOC83_28075	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
FOC83_28080	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
FOC83_28080	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
FOC83_28085	COG1643	Atp-dependent helicase
FOC83_28090	COG0395	ABC-type sugar transport system, permease component
FOC83_28095	COG1116	anion transmembrane transporter activity
FOC83_28110	COG0438	transferase activity, transferring glycosyl groups
FOC83_28115	COG0726	polysaccharide deacetylase
FOC83_28130	COG0726	polysaccharide deacetylase
FOC83_28155	COG1132	(ABC) transporter
FOC83_28160	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
FOC83_28160	COG0475	glutathione-regulated potassium exporter activity
FOC83_28170	COG3706	GGDEF domain
FOC83_28170	COG4251	negative regulation of phosphorylation
FOC83_28170	COG2203	Gaf domain
FOC83_28170	COG5001	Diguanylate cyclase
FOC83_28180	COG1530	ribonuclease E activity
FOC83_28210	COG2204	response regulator
FOC83_28215	COG4191	Histidine kinase
FOC83_28220	COG1301	dicarboxylic acid transport
FOC83_28230	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
FOC83_28235	COG0799	negative regulation of ribosome biogenesis
FOC83_28240	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
FOC83_28250	COG0151	Belongs to the GarS family
FOC83_28255	COG0217	transcriptional regulatory protein
FOC83_28260	COG0433	COG0433 Predicted ATPase
FOC83_28265	COG0473	3-isopropylmalate dehydrogenase activity
FOC83_28275	COG2814	Major facilitator Superfamily
FOC83_28280	COG1566	PFAM secretion protein HlyD family protein
FOC83_28290	COG1846	Transcriptional regulator
FOC83_28320	COG3391	amine dehydrogenase activity
FOC83_28330	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
FOC83_28350	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
FOC83_28355	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
FOC83_28365	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
FOC83_28390	COG1309	transcriptional regulator
FOC83_28395	COG2311	Membrane
FOC83_28400	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
FOC83_28425	COG0662	Cupin 2, conserved barrel domain protein
FOC83_28430	COG5285	phytanoyl-CoA dioxygenase
FOC83_28435	COG3217	Mosc domain protein beta barrel domain protein
FOC83_28435	COG0633	Ferredoxin
FOC83_28440	COG2076	Multidrug Resistance protein
FOC83_28455	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_28470	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
FOC83_28475	COG0425	Belongs to the sulfur carrier protein TusA family
FOC83_28485	COG0228	four-way junction DNA binding
FOC83_28495	COG0336	Belongs to the RNA methyltransferase TrmD family
FOC83_28500	COG1396	sequence-specific DNA binding
FOC83_28505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_28510	COG0765	amino acid transport
FOC83_28520	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_28525	COG0525	valine-tRNA ligase activity
FOC83_28530	COG0105	UTP biosynthetic process
FOC83_28555	COG2976	Protein conserved in bacteria
FOC83_28560	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC83_28565	COG1160	GTP binding
FOC83_28570	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
FOC83_28575	COG1923	regulation of RNA biosynthetic process
FOC83_28580	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
FOC83_28585	COG0330	HflC and HflK could
FOC83_28590	COG0330	HflC and HflK could
FOC83_28595	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
FOC83_28600	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
FOC83_28605	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
FOC83_28610	COG0828	Belongs to the bacterial ribosomal protein bS21 family
FOC83_28630	COG0438	transferase activity, transferring glycosyl groups
FOC83_28640	COG2755	lipolytic protein G-D-S-L family
FOC83_28640	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
FOC83_28670	COG4964	Belongs to the GSP D family
FOC83_28700	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
FOC83_28710	COG1295	ribonuclease BN
FOC83_28720	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
FOC83_28745	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
FOC83_28840	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
FOC83_28855	COG1538	Outer membrane efflux protein
FOC83_28875	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
FOC83_28885	COG0101	tRNA pseudouridine synthase activity
FOC83_28890	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
FOC83_28910	COG0596	Alpha beta hydrolase
FOC83_28945	COG0129	dihydroxy-acid dehydratase activity
FOC83_28950	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC83_28955	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
FOC83_28960	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
FOC83_28965	COG1609	Transcriptional regulator
FOC83_28985	COG4172	Belongs to the ABC transporter superfamily
FOC83_28990	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
FOC83_28995	COG0601	transmembrane transport
FOC83_29005	COG1012	belongs to the aldehyde dehydrogenase family
FOC83_29035	COG0635	Involved in the biosynthesis of porphyrin-containing compound
FOC83_29040	COG2197	response regulator
FOC83_29050	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
FOC83_29055	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
FOC83_29070	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
FOC83_29075	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
FOC83_29080	COG0004	ammonium transporteR
FOC83_29085	COG0347	Belongs to the P(II) protein family
FOC83_29095	COG2960	long-chain fatty acid transporting porin activity
FOC83_29105	COG0291	Belongs to the bacterial ribosomal protein bL35 family
FOC83_29110	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
FOC83_29115	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
FOC83_29120	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
FOC83_29120	COG0072	phenylalanine-tRNA ligase activity
FOC83_29150	COG2814	Major facilitator Superfamily
FOC83_29175	COG0384	phenazine biosynthesis protein PhzF
FOC83_29180	COG0456	acetyltransferase
FOC83_29215	COG1522	sequence-specific DNA binding
FOC83_29245	COG0583	DNA-binding transcription factor activity
FOC83_29250	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_29275	COG1116	anion transmembrane transporter activity
FOC83_29305	COG5265	(ABC) transporter
FOC83_29310	COG0656	L-ascorbic acid biosynthetic process
FOC83_29325	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC83_29335	COG1917	Cupin 2, conserved barrel domain protein
FOC83_29335	COG4977	sequence-specific DNA binding
FOC83_29340	COG2223	nitrite transmembrane transporter activity
FOC83_29350	COG1215	transferase activity, transferring glycosyl groups
FOC83_29355	COG0726	polysaccharide deacetylase
FOC83_29355	COG1649	PFAM Uncharacterised BCR, COG1649
FOC83_29360	COG0457	Tetratricopeptide repeat
FOC83_29365	COG3706	GGDEF domain
FOC83_29390	COG1610	YqeY-like protein
FOC83_29395	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
FOC83_29400	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_29440	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC83_29450	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC83_29455	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
FOC83_29485	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
FOC83_29490	COG0697	spore germination
FOC83_29495	COG0506	proline dehydrogenase activity
FOC83_29515	COG0583	DNA-binding transcription factor activity
FOC83_29520	COG0583	DNA-binding transcription factor activity
FOC83_29525	COG0625	glutathione transferase activity
FOC83_29540	COG2814	Major facilitator Superfamily
FOC83_29545	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
FOC83_29560	COG1960	acyl-CoA dehydrogenase activity
FOC83_29565	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_29605	COG3245	cytochrome
FOC83_29610	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FOC83_29625	COG1280	lysine exporter protein (LysE YggA)
FOC83_29640	COG0697	spore germination
FOC83_29645	COG0697	spore germination
FOC83_29660	COG0534	Mate efflux family protein
FOC83_29665	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
FOC83_29670	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_29680	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
FOC83_29685	COG1274	phosphoenolpyruvate carboxykinase (GTP) activity
FOC83_29695	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_29730	COG2207	Transcriptional regulator
FOC83_29745	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_29750	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_29755	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
FOC83_29760	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
FOC83_29770	COG1304	FMN binding
FOC83_29790	COG3712	iron ion homeostasis
FOC83_29795	COG1595	DNA-templated transcription, initiation
FOC83_29825	COG3121	Chaperone
FOC83_29835	COG0784	Response regulator, receiver
FOC83_29835	COG2198	Histidine kinase
FOC83_29835	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_29835	COG2205	protein histidine kinase activity
FOC83_29840	COG2205	protein histidine kinase activity
FOC83_29840	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_29855	COG5001	Diguanylate cyclase
FOC83_29855	COG1716	ATPase activity
FOC83_29875	COG3088	subunit of a heme lyase
FOC83_29880	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC83_29890	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FOC83_29910	COG4133	protoheme IX ABC transporter activity
FOC83_29930	COG3381	protein complex oligomerization
FOC83_29950	COG4235	cytochrome complex assembly
FOC83_29960	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
FOC83_29970	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
FOC83_29990	COG4133	protoheme IX ABC transporter activity
FOC83_29995	COG3005	denitrification pathway
FOC83_30000	COG3043	anaerobic respiration
FOC83_30020	COG3246	L-lysine catabolic process to acetate
FOC83_30025	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_30030	COG0583	DNA-binding transcription factor activity
FOC83_30040	COG0129	dihydroxy-acid dehydratase activity
FOC83_30045	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_30050	COG5001	Diguanylate cyclase
FOC83_30055	COG1024	Enoyl-CoA hydratase
FOC83_30095	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
FOC83_30100	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_30105	COG0583	DNA-binding transcription factor activity
FOC83_30110	COG2610	gluconate transmembrane transporter activity
FOC83_30150	COG0235	Class ii aldolase
FOC83_30155	COG0477	Major facilitator Superfamily
FOC83_30170	COG2188	Transcriptional regulator
FOC83_30175	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_30215	COG1280	lysine exporter protein (LysE YggA)
FOC83_30220	COG5265	(ABC) transporter
FOC83_30230	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
FOC83_30245	COG0318	PFAM AMP-dependent synthetase and ligase
FOC83_30250	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_30280	COG1132	(ABC) transporter
FOC83_30285	COG0583	DNA-binding transcription factor activity
FOC83_30295	COG0583	DNA-binding transcription factor activity
FOC83_30305	COG0583	DNA-binding transcription factor activity
FOC83_30330	COG2226	methyltransferase
FOC83_30340	COG2814	Major facilitator Superfamily
FOC83_30345	COG0154	amidase activity
FOC83_30380	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
FOC83_30400	COG1028	Short-chain dehydrogenase reductase Sdr
FOC83_30410	COG1012	belongs to the aldehyde dehydrogenase family
FOC83_30415	COG0307	riboflavin synthase, alpha
FOC83_30425	COG2271	Major facilitator Superfamily
FOC83_30435	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
FOC83_30445	COG0789	Transcriptional regulator
FOC83_30470	COG4774	siderophore transport
FOC83_30480	COG0022	dehydrogenase e1 component
FOC83_30500	COG0165	Argininosuccinate lyase
FOC83_30505	COG0668	transmembrane transport
FOC83_30575	COG2165	general secretion pathway protein
FOC83_30605	COG0583	DNA-binding transcription factor activity
FOC83_30615	COG0747	negative chemotaxis
FOC83_30620	COG0601	transmembrane transport
FOC83_30630	COG4172	Belongs to the ABC transporter superfamily
FOC83_30635	COG4681	YaeQ
FOC83_30650	COG0477	Major facilitator Superfamily
FOC83_30655	COG3161	chorismate lyase activity
FOC83_30660	COG1187	pseudouridine synthase activity
FOC83_30665	COG0583	DNA-binding transcription factor activity
FOC83_30690	COG1999	signal sequence binding
FOC83_30700	COG0339	signal peptide processing
FOC83_30705	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
FOC83_30710	COG4566	intracellular signal transduction
FOC83_30720	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
FOC83_30725	COG0508	dehydrogenase complex catalyzes the overall conversion of
FOC83_30730	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
FOC83_30740	COG0583	DNA-binding transcription factor activity
FOC83_30760	COG4797	methyltransferase
FOC83_30760	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
FOC83_30765	COG1191	sigma factor activity
FOC83_30785	COG1360	Flagellar Motor Protein
FOC83_30790	COG0745	RESPONSE REGULATOR receiver
FOC83_30800	COG0835	chemotaxis
FOC83_30805	COG0840	transmembrane signaling receptor activity
FOC83_30810	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
FOC83_30815	COG2201	protein-glutamate methylesterase activity
FOC83_30820	COG0745	RESPONSE REGULATOR receiver
FOC83_30825	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
FOC83_30830	COG0840	transmembrane signaling receptor activity
FOC83_30855	COG2747	anti-sigma28 factor FlgM
FOC83_30865	COG1815	bacterial-type flagellum-dependent cell motility
FOC83_30870	COG1558	bacterial-type flagellum-dependent cell motility
FOC83_30885	COG4787	bacterial-type flagellum-dependent cell motility
FOC83_30920	COG0840	transmembrane signaling receptor activity
FOC83_30925	COG0840	transmembrane signaling receptor activity
FOC83_30935	COG0840	transmembrane signaling receptor activity
FOC83_30940	COG0840	transmembrane signaling receptor activity
FOC83_30965	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC83_30975	COG1580	Controls the rotational direction of flagella during chemotaxis
FOC83_31000	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
FOC83_31005	COG1766	The M ring may be actively involved in energy transduction
FOC83_31010	COG1677	Flagellar hook-basal body complex protein FliE
FOC83_31020	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
FOC83_31040	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
FOC83_31045	COG1334	flagellar protein FlaG
FOC83_31050	COG1414	Transcriptional regulator
FOC83_31060	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_31065	COG3181	Tripartite tricarboxylate transporter family receptor
FOC83_31075	COG0285	dihydrofolate synthase activity
FOC83_31095	COG1451	nucleotide metabolic process
FOC83_31100	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
FOC83_31110	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
FOC83_31115	COG0024	Methionine aminopeptidase
FOC83_31120	COG0052	Belongs to the universal ribosomal protein uS2 family
FOC83_31125	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
FOC83_31130	COG0528	UMP kinase activity
FOC83_31135	COG0233	cytoplasmic translational termination
FOC83_31140	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
FOC83_31150	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
FOC83_31155	COG0750	zinc metalloprotease
FOC83_31160	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
FOC83_31165	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
FOC83_31170	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
FOC83_31175	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
FOC83_31190	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
FOC83_31195	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
FOC83_31215	COG2169	Transcriptional regulator
FOC83_31215	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
FOC83_31220	COG0518	GMP synthase (glutamine-hydrolyzing) activity
FOC83_31220	COG0519	Catalyzes the synthesis of GMP from XMP
FOC83_31240	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
FOC83_31245	COG2867	negative regulation of translational initiation
FOC83_31250	COG2914	Belongs to the UPF0125 (RnfH) family
FOC83_31260	COG1024	Enoyl-CoA hydratase
FOC83_31260	COG1250	3-hydroxyacyl-CoA dehydrogenase
FOC83_31285	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
FOC83_31290	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
FOC83_31295	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
FOC83_31300	COG0084	hydrolase, TatD family'
FOC83_31315	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
FOC83_31325	COG1126	abc transporter atp-binding protein
FOC83_31330	COG0010	Belongs to the arginase family
FOC83_31340	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
FOC83_31350	COG0095	Lipoate-protein ligase
FOC83_31365	COG0625	glutathione transferase activity
FOC83_31375	COG1522	sequence-specific DNA binding
FOC83_31380	COG0386	Belongs to the glutathione peroxidase family
FOC83_31385	COG2814	Major facilitator Superfamily
FOC83_31405	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
FOC83_31415	COG0840	transmembrane signaling receptor activity
FOC83_31430	COG1804	L-carnitine dehydratase bile acid-inducible protein F
FOC83_31465	COG1902	pentaerythritol trinitrate reductase activity