 IUJ48_00040    9094 ..    9108 +  -4.9  -2.77148   GTCGCCACCGGCAGG               GCGCC TTATC GGTGC               TAGTCTCTTGCTCAA  44 139
 IUJ48_00045    9714 ..    9724 +  -4.6  -4.42743   TTTTACTGTATTTCG                 TGGC TGG GCCG                 TTTATCTTGTTTATG  70 61
 IUJ48_00050   10809 ..   10822 +  -3.9  -3.26031   TGTAAATCCAAAAAA               CAAAT CATA ATTTG                TATATTTGAAATACA  47 64
 IUJ48_00055 NONE
 IUJ48_00060   12645 ..   12659 +  -2.8  -2.53894   ACTTTTTTTACTGTA               GTTCGA TTC TCAAAC               GTTAATGGTAATGAT  39 146
 IUJ48_00065   15880 ..   15902 + -10.5  -5.08824   GGATTCTTCGCATGT           GCGGCGCAC GCATA GTGCGGCGC           TTTTTTGGGTCGGGG 100 93
 IUJ48_00070   16602 ..   16638 + -17.3  -5.48514   CTCGGGCGCGTGGGT    CACGGTCGCGGCGGG CCTATCC CCCGTCGCGACCGTC    TTTTTGTTTCTTCAT 100 67
 IUJ48_00075 NONE
 IUJ48_00080 NONE
 IUJ48_00085   21805 ..   21836 +  -5.6  -4.52589   AGGATCAGGTCGTAG      CGCAGCACGTCGCG CCAA TGCAGCGGGCCGCG       TTTTCTGTCCAGGCG  72 518
 IUJ48_00095 NONE
 IUJ48_00100   25017 ..   25041 +  -2.6  -3.53811   CGGGGCGGCCGTCGC          AGCCGTCCCG CGTGA CCGGCCGGCA          TTTCCGGCCAATCAC  47 55
 IUJ48_00105   26189 ..   26212 + -13.8  -3.17051   TTATGTCTATAGACG          GTCGCCCGCG TGCC TGCGGGCGGC           TATTGATGATCCGCG  76 160
 IUJ48_00110 NONE
 IUJ48_00115   29108 ..   29118 +  -6.8  -3.73068   CTTCGGTTGTCGTCT                 CAGG CAA CCTG                 TTCTTCGGTTAAGCG  62 60
 IUJ48_00120   29706 ..   29716 +  -5.4  -3.02043   TGGCGCGGGAGATAG                 TCGT GCC ACGA                 TCTTGCGGACGAATT  46 26
 IUJ48_00125   30429 ..   30466 +  -8.3  -3.05384   GGCCGCATCATCACG   CGGCGGTACCACGCCGAC AGC GCCGGCGTG-TCCGGTCG   TTCGATCGGCAGCCC  55 154
         ffh   34563 ..   34593 +  -9.7  -2.90496   CAGGGGGTTCTGCGC      CGCGATACTGGCCC GCGA GGGCCGGT-TCGCA       TGGTTTACGACAGGG  58 161
 IUJ48_00180   38697 ..   38745 +  -6.7  -3.91897   GCAGGACCCGGGCAC GGCCTAGGGCCTGTTC-ACACT AAAAGG AGCCTCGCACAGGCCCTAGGGC TTTCTCGATCCGGGA  64 19
 IUJ48_00185 NONE
 IUJ48_00190   41063 ..   41075 + -10.5  -3.14132   TTTGCTTCACACCAC                GCGCC TGG GGCGC                TTCATACAAAAACAG  63 44
 IUJ48_00195   42162 ..   42181 +  -7.8  -3.09516   TCTTGTGCCGGGGCA            CGACACCC GAGC GGGTGTAG             TTCAATGGTAGAACG  55 95
 IUJ48_00200   42668 ..   42684 +  -6.5  -3.18912   CAGGGATGGAGCACA              CCGCG ATCTCTA CGCGG              TTGGTCCCTCCGTCC  54 447
 IUJ48_00220 NONE
 IUJ48_00225   47697 ..   47711 +  -2.7  -3.87373   AGACTCGGCGCCAAG               GCCCG TCATT CCGGC               TTTATACCCGCTGTC  55 52
 IUJ48_00240   51263 ..   51283 +  -5.3  -3.53224   CGTGCAGCGCCGTCA            ACGCCGATC CGC GGTCGGTGG            TTTGCGGCGGGCCTG  53 63
 IUJ48_00250   53679 ..   53693 +  -9.2  -2.91264   AGATGACCTGCTGCG               GGCGCG CGG CGTGCC               TGTCTAGGTCGGACG  58 4
 IUJ48_00255   54936 ..   54949 +  -5.2  -3.27525   TGTCCGCCGGATGAT               CCGC CGGCTC GCGG                TTCAGTTTCGCGCAA  49 104
 IUJ48_00265 NONE
 IUJ48_00270   57963 ..   57984 +  -4.3  -2.60211   GGGTGCGGCCGGAAT           TCGCGCTGT GAGA GCGGTGCGG            CATTTTTCCAAGGAT  41 15
 IUJ48_00275   59098 ..   59128 +  -7.4  -3.07344   GCGTCAGGGCCGCGT       TCGGCCTTGCCGAC CAT GGCGATGAGGCCGG       TGTGTTCCAGCATCA  52 339
 IUJ48_00320   68197 ..   68240 +   -10  -3.67052   CCGCGCGCCGGCCGC GGCGCCCGGGCGTCGTGCCG GCCG CGCCATGTCGCGCCGGCTCC TTCTCTTGCCGCTGT  71 143
 IUJ48_00325   69675 ..   69713 +    -3  -4.37886   GGTCAACCCGGAGAC  GGCG-GCCGCCGCGC CCGGCCTGTC GCGCGCCGGCTTGCA   TTTTGTGGCACATGG  66 67
 IUJ48_00330   71599 ..   71612 +  -2.3  -3.63991   GCGTAGGGCTGTTGC               TCCAC GGCG GCGGA                TTGTTCGCCGTAATA  50 293
        rpmJ   80568 ..   80600 + -14.8  -3.19602   GGACCCTGGCGGCCC      GCCAGGCCGCGACC TCGGT GGTGACGGCCTGGC      TGTTGATCTGAGGAA  83 99
 IUJ48_00370   81184 ..   81200 +  -9.3  -3.56594   CAGCTTTGTGGCATG              CTGCGGG CTG CCCGCCG              TTTCCCGACCTTTCC  68 356
 IUJ48_00380   81912 ..   81928 +  -5.7  -2.52464   CAGCGGCGTGCAGTC              GGTGGGC TGG GCCCGGC              TCAGTTGCACGAAGC  44 280
 IUJ48_00395   85286 ..   85311 + -14.7  -2.71712   AGCTTTGCGCCGGCG         GGCGCCTGGGG ATAT CCCTAGGTGCC          GTTTGCGCCCGGCCG  75 40
 IUJ48_00400 NONE
 IUJ48_00405   88241 ..   88251 +  -2.4  -2.71924   ACCGTATCGACACGA                 CGGC GAC GCAG                 GTTTGAAAGGCAATA  38 9
 IUJ48_00410 NONE
 IUJ48_00415   90840 ..   90879 +  -6.3  -2.73875   GATACCCACCGACGC GCGGCGCGCGCGTGCGGCC GGAT GGC-GC-TGCTGGCGTCGC  TGATGTTGGCCACGG  46 76
 IUJ48_00420   92552 ..   92593 +   -10  -4.62069   GGCGGCCAGCCGAAA TCG-GCTCGCGCCCGGCGG AAATG CCCCCGGGCGTGCGTGCGG TTTTTCCCGTGGAAC  91 43
 IUJ48_00425   93532 ..   93549 +  -5.5  -3.43071   CCCGATCCGCGCATT             CAGGAGA TCGT TCCCCTG              TTAATTAGTCTGAGG  55 92
 IUJ48_00430 NONE
 IUJ48_00435 NONE
 IUJ48_00440   97053 ..   97064 +  -7.2  -3.03441   CGATGCCGCGCGCAG                GCGG CATA CCGC                 TCTTCACGAATCATG  50 66
        tcuA NONE
        tcuB NONE
 IUJ48_00455  101178 ..  101218 +    -9  -3.53012   TCACCAGCCAGACAC CGATGGCGGCGATGGCG GCGAAGAA CGCCATC-CCGCCGATG  TTTGCGCGGGCACGC  61 352
 IUJ48_00495  108603 ..  108658 + -14.6  -2.59447   TGCAGATGAACGCCA CCAGCGCGGCGATTTCGTCGGGCTGGC CCA GCCGGCCCAGCGGAATCTGCG-GCAGG ATCTTCTCCTTGAGC  69 138
 IUJ48_00535  118623 ..  118663 + -12.4  -3.00298   CCGCGCGCCTGCCTT CGGCGGCGGCGTCGCCGTG GATG CGCGGGGCCGC-GCCGCCC  TGTATCCTTGCGACA  68 41
 IUJ48_00540  120673 ..  120689 +  -8.1  -4.25056   TTTTAGGATAAAAAA              TTATCGT TTG ACGATAA              TTTGTTGCTACACTA  75 408
 IUJ48_00545  121389 ..  121403 +  -4.2   -2.8001   CCCGGGTCGCGGAAG               AGAACC GGG GGTTCA               TCTGATGGCGATTGT  43 6
 IUJ48_00550  121687 ..  121701 + -11.4   -2.9462   TGGCGCGTGGCCATG               CGTGGG ATT CCCACG               TCCTTTCGATGGATG  65 71
 IUJ48_00555  122212 ..  122230 +  -4.4  -5.03715   ACCGAGAACACCAGG             TCGGGCTG CAC CCGCCGGA             TTTTTTCCAGGTGCT  82 143
 IUJ48_00570 NONE
 IUJ48_00580  127686 ..  127704 +  -3.7  -4.20367   AAACCGCCGGCAAGC             GTGCCGC GGCGG GCGGTCC             TTGTTTCTTGCGGGA  66 123
 IUJ48_00585  128539 ..  128575 +    -8   -2.6155   CGGTTCGGCGGGCCG   CGCTTGATCCGTGGC AAGCGGGC GCCGCGG-TCCAGCG    ATTACTATTACGCCC  50 43
 IUJ48_00590  129396 ..  129412 + -13.7  -5.53991   GCCGCCTGAAAAAAA              GCCCGCA GAT TGCGGGC              TTTTTTTCATGGCTC 100 67
        apbC NONE
 IUJ48_00610  135124 ..  135162 +  -5.3  -3.25896   TGGTGTGGTGGCTGC  CGGGGCTGGCGATGCTGGC GGT GCTGGCGT-G-CAGCTTCG  TATTCTGGCTGCTGG  49 71
 IUJ48_00615 NONE
 IUJ48_00620  139466 ..  139483 +  -3.4  -4.13767   GCACCTGATGCGCCA             GG-GCCT GTGCG AGGCTCC             TTTTAGCCTGAACAG  60 33
 IUJ48_00630  141862 ..  141896 +  -3.4  -3.63515   GGCCGTAGGTCTCGA    AGCCGAGG-CTGGCG TACAAC CGGCAGGCCGCGGCG     TTGTTGGCGGTGACG  51 135
 IUJ48_00640  142906 ..  142943 + -18.5  -3.54741   GATGGCGTCGGCAGG  GGGCCGCG-C-GGCGCC TTCGCC GGCGCCCGGCGCGGCCC   TTTGGCGCCGTCCTC  93 68
 IUJ48_00645  145385 ..  145397 +  -3.3  -3.12327   CGAAGACTGATCAGG                TCCGG AGT CCCGA                TGTTCGATGTCGCCG  43 31
 IUJ48_00650  146593 ..  146612 +  -5.6  -3.35088   GGCCTGCGGCAAGGC            GCTCTAGG CGTT CCTGGCGC             TTCATTCAACGCTTT  53 19
 IUJ48_00655 NONE
 IUJ48_00660  148382 ..  148394 + -10.5  -3.00704   GGATCAACAACGGAA                CCGCG TTT CGCGG                TATGCTTTCGGCGCT  62 64
        gcvT NONE
        gcvH NONE
        gcvP  153395 ..  153410 +  -2.4   -4.4267   TGGGAGTGGCGGCTA              CGGGGC GATA GATCCG               TTTTGCCTTTTCAAC  65 134
 IUJ48_00700  156420 ..  156452 + -15.6  -4.18197   TTAGATTAAATAAAA      GGCCTGAGTCCGGT GTTGA ACCGAGCTCAGGCC      TTTTGACTGCGGACT  95 136
 IUJ48_00755  173051 ..  173078 + -11.9  -3.18264   CGCGATGGCAGCCAT        CGCGCCCGGGC GGGGCG GCTCAGGCGCG         TTCGTACGTCACGAA  71 74
        coq7  178808 ..  178831 + -16.8  -5.75342   CCTTTGGTGGATTTA          GCCCGAGATC TCAC GATCTCGGGC           TTTTTTTTGAGCGCA 100 446
 IUJ48_00785  180304 ..  180337 +  -8.8  -3.35679   CGGGCAGACTAAGTT     TTGGGCGCCCCGGTG ATCAC CGCCGGGG-GCTCGG     TTATCCATCACCCCG  60 29
        tviB NONE
        tviC  182697 ..  182709 +  -4.8  -3.51232   CGATGCCCTGGTACA                CGCA ATTCC TGCG                TTGATTTGAAAGCAC  53 9
 IUJ48_00800 NONE
 IUJ48_00805  185186 ..  185226 +  -6.8  -3.16564   GGAAGAACTTTTTGA CGGTGT-GCGCG-GATCGGG CCG CTAGGCCGCGCGCCACACCG TTGCTGCGGTGACCA  51 1
        asnB NONE
 IUJ48_00815 NONE
 IUJ48_00820  189446 ..  189474 +  -4.4  -3.95424   GTGGCGCCGCCTTTC       CGGAGGCCCG-GC ATGA GCGCGGCCCGTCG        TTTGCTGTTCGTGGT  60 10
 IUJ48_00825  190655 ..  190684 + -13.5   -4.3467   CGCCATCGAGGCCTT       GCGGCGTCAC-GCG TAT CGCGGCGGCGCCGC       TTTTCATGTCGACCT  95 89
 IUJ48_00845 NONE
 IUJ48_00850 NONE
 IUJ48_00855 NONE
 IUJ48_00860  199952 ..  199970 +  -4.4  -3.60818   ACGCCGGGGGCGAGG             CTCCCCCC GGT GGGCGGAA             TTTGACGAATTTTCG  53 51
 IUJ48_00865  200900 ..  200947 + -11.9  -3.01712   CCGTGCCGACCGAGA CTCCGCCGAT-GGCGCAGCCCA CGAAC TGGGTGGTGCCCACCGGCGGCG TGTTCAGGCCCAGCG  62 99
 IUJ48_00895  206419 ..  206432 +  -5.2  -3.37017   CCGGCGGCGCTGCGG               CGCG TCGATC CGCG                TTAATCTTGGCCGTT  51 136
 IUJ48_00900  208446 ..  208460 +    -7  -3.73775   TGACTTCACCCCGTC               CGGGCC TGG GGCCGG               TTTGATCCCGCTCAA  62 38
 IUJ48_00905  209842 ..  209885 + -10.3  -3.69395   TAGGCATCGCGGAAA TTGCTGCG-CGACAGGCGGGC CGGC GCCTGCTTGCCGGCGC-GCGA TTGTTCGGTGGTCAG  71 340
 IUJ48_00920  213509 ..  213522 +  -4.5  -3.56937   CTTCGTAGAAGTCGT               CC-GGC GCG GCCAGG               TTGGTTTCGGTGTTC  54 176
 IUJ48_00945 NONE
        lolB  220050 ..  220075 +  -8.9  -5.00884   GCGCGGCATGCAAGG         CCGGTGGCCGCG GAT CGC-GCCGCCGC         TTTTTTACGGAGAAT 100 217
 IUJ48_00955  221855 ..  221868 +  -2.3  -4.59773   GCGGGTCGCTAAAAT               CGACG CATC CGTCC                TTTTTCCCGATCCGC  70 187
        ispE NONE
 IUJ48_00965  222922 ..  222964 +  -4.2  -5.79595   CGAATACATAACAAA GCTGTTGAACAC--GCCTGT AAGAC ACTGGCCCGGGTTCAGCAGC TTTTTTATTTTCCGG 100 43
 IUJ48_00970  224078 ..  224097 +  -4.2  -5.93252   CGCCGTGTCTTTAAC            CGGTGAAG TCCG CTTCGCCA             TTTTTTGTTTTTGGA 100 113
 IUJ48_00975  224779 ..  224806 + -15.6  -5.37593   GGCTTGCGCCCGAAA        CCCTGCGTGTGC ATTT GCATGCGCAGGG         TTTTTTGGTTTAAAC 100 70
         pth NONE
 IUJ48_00985 NONE
        ychF  227725 ..  227760 +  -7.6  -4.26903   GCGGTGGAAGTACCG    CCTGCAA-GGCAAGGAG AAC CTCTTTGCCATTGGCGG    TTTTCCTCAAGTAAG  75 356
 IUJ48_01000 NONE
 IUJ48_01005 NONE
 IUJ48_01010 NONE
 IUJ48_01015 NONE
 IUJ48_01020 NONE
 IUJ48_01025  239700 ..  239710 +  -8.2  -2.80816   TCGGTGACCCTGTGC                 CCGC CAG GCGG                 TGTGCTGCGTGGAGC  52 395
 IUJ48_01040  243975 ..  244007 + -26.4  -3.16881   GACGAGGGCGCGAAT      CCGCCTGCGCCGGT AAGGG ACCGGCGCAGGCGG      TTGGTGGAGTACGTA 100 84
 IUJ48_01070 NONE
 IUJ48_01075  254547 ..  254560 +  -9.5  -3.01924   CGCCGCATCAGCCCG               CCGGC TTGC GCCGG                TATTCGAACACGGTG  59 98
        ftsY  258711 ..  258754 + -27.5  -3.85698   GCCCGGCGCTGAAAA CACCGCGCCCCACGTCTGC TGCATC GCAGGCGTGGGGCGCGGCG TTTGTGGCGGGCGCA 100 72
 IUJ48_01110  265013 ..  265057 +    -4  -4.11394   GCTTCTGACGCTTGC CGCG-CGGGCGGGTCGCGGCT TGCC GGCCGCCTCTCATCCGTCGCC TTTTACCCGTCGCCT  62 33
 IUJ48_01145 NONE
 IUJ48_01150 NONE
        nusB  272956 ..  272971 +  -2.5  -3.56704   CGGTCTCCTTTCTTT              CGGAG CTACCT TTCCG               TTCCTTTGGTGCGGG  50 148
        thiL NONE
 IUJ48_01165 NONE
 IUJ48_01170  275543 ..  275562 +   -10  -2.71144   CCGCGTCGCCGATGC            GCTGG-CGC ACC GCGGCCAGC            TCGTTCGGGAAGGTC  56 310
 IUJ48_01190  279917 ..  279928 +  -7.2  -3.93695   GGACGTGCCGCTCCA                GGCC ACCC GGCC                 TTTCTCGATGATGGC  67 122
 IUJ48_01245  290057 ..  290081 +  -6.4  -2.75481   AGGCCCTGCCGCAGC         CGTCGG-GGCGG ATG CCGCCGTCG-CG         TCCTTGCCCTTGGCC  46 140
 IUJ48_01270  294576 ..  294593 +  -5.5  -3.25823   CGCCGCAAGCCGCGA             GCGCG TGTCCGAT CGCGC              TTCATATCCCGAGAC  51 164
 IUJ48_01275  295118 ..  295148 + -10.2  -3.26471   CGCAACCCTTGGGCC       GCGCGAAGGCGCCG CGA CGGCGTCGAAGCGC       TTGCTGTCGGCCTCA  65 48
 IUJ48_01310  304581 ..  304619 +    -6  -4.19506   GGGCCTGCCCGTCCG   TAAGCTGGCGTCCATT GAAACGA GATGGACGCCAACATG   TTTTCGACTTCGCCT  66 82
 IUJ48_01315  305359 ..  305377 +   -11  -3.55563   CCCATTTTCCATTCT             TCCTGTCC GCC GGACGGGA             TTTCACCCATAAGGT  72 72
 IUJ48_01320  306408 ..  306462 +    -5  -3.66908   GGCGATGCCGCTGCG CTGAGGACGCCGCCATGCGCGGACAGGC CGC GCCTGTCCGC-CG-GCCGGCG-CGA-AG TTGCTTTTCACGCGA  55 22
 IUJ48_01325  307323 ..  307339 +  -2.2  -3.53224   GCCCGGCCGGCGATC              GCGG CCAGATACC CCGC              TTTGGGGGAGGCATA  47 42
 IUJ48_01330  309040 ..  309089 +    -5  -4.33653   CCGCCGCCTTCGCCG C-CGCCCCG-CGCGCC-GGCGCGG GGTTGG CCGTGCCTGGC-CGATGGCGCGTG TTTCGTTTTTCCCTC  70 90
 IUJ48_01335 NONE
 IUJ48_01340  312242 ..  312296 +   -15  -3.01712   GCGCCGGCGATGAGG CCGTCGCGCAGGGCCTG-GTGGACGG CGGCC TCGTCGACACAGGCGCCGCGCG-CGG TGTTCAGGAGGAAGG  74 319
 IUJ48_01365 NONE
 IUJ48_01370  318119 ..  318138 +   -15  -5.41746   TGACGATTCCCGCGA            TGCGCGCC GGCC GGCGCGCA             TTTTTTTGAACCATT 100 38
 IUJ48_01375 NONE
 IUJ48_01380  319501 ..  319538 + -12.6  -3.61398   AGCGCTTGCGCGATG   GCGCGGGCCGATGCCA GCAGCG TGGCGGTGGCCCGAGC    TTCTTCCGCCAGCAA  77 221
 IUJ48_01390  320907 ..  320923 +  -9.4  -5.03314   GATGTGACGGCGGCT              CACGCG GTTGG CGCGTG              TTTTTTCCGGCTGCG 100 34
 IUJ48_01400  323166 ..  323182 +  -2.1  -5.28778   CCGACCGCATCGGCC              CCGGAAC CGC GTCCCGC              TTTTTTCTGGATCAT  88 98
 IUJ48_01405  324827 ..  324843 +  -9.4  -4.72272   TGTTTCGACGACCAA              GCCCCT GCAAG AGGGGC              TTTTTCATAACCGGA  91 45
 IUJ48_01410  325824 ..  325841 +  -2.6  -3.14693   CGCCAACATTTCCCT             GGAGGC GTGATG GCATCC              TCTCTTCCTGATGGC  42 16
        argE  327221 ..  327237 +  -9.3  -3.54424   ATGTAGCCCGAAGCC              GCGCCGG CGC CCAGCGC              TTTGACGCCCTCGAA  63 253
 IUJ48_01425 NONE
 IUJ48_01430  330395 ..  330405 +  -8.2  -5.75342   AGTGGGCTGAGCGGC                 GCGC GCT GCGC                 TTTTTTTTCAGCGGC 100 31
 IUJ48_01435  331652 ..  331672 +  -6.7  -4.68705   GTGACGGCATCGCGG            TCCGGCCCG GGC CTGGCGGGA            TTTTGTTGCAATTGT  82 37
 IUJ48_01440  332255 ..  332298 + -12.2  -3.61398   CGGGCTGGTTCCATA GCGACGCGCGGC-CACGCCGC CAT GCGCCAGGCGCTGCGCGCCGC TTCTTCGCGGCACGG  77 25
        dsbG  333280 ..  333306 +  -5.7  -2.75064   AAGCTGGCCGAGGTG        TTCG-GGCCGCG CTGA CGCGGCCGCGCC         TGGTTCAGTACGCGC  46 11
 IUJ48_01455 NONE
 IUJ48_01460 NONE
 IUJ48_01465  338861 ..  338918 +    -4  -5.75342   CATCCCCTGCCGTGG TG-GAC-CCG-CGTCACCCCCCGTTGACG GGG CGCCGGCAGGGCGTGGCGGCGGTGGCGCA TTTTTTTTGCAAAAG 100 2
 IUJ48_01470 NONE
 IUJ48_01475  342629 ..  342677 +    -8  -5.47218   AGACGACTAGGAGCC GTGCCCTTCCGTGCTGGCCGGCCG TGC TGGCAGGCC-GCG-GGACAGGCGC TTTTTTTGGATCGGC 100 31
 IUJ48_01480  344361 ..  344386 + -11.1  -3.53012   TGGCGGCATGGTTCG         CGGCGCGCGGCT GGA AGCC-CGCCCCG         TTTCAGCGCGAGACG  72 71
        pdeM  347486 ..  347506 +    -9  -3.01712   GTGGCCGCGCGCGGC           GGGC-GAGG TGTG CCTCAGCCC            TGTTGCGCCAGCCAC  56 95
 IUJ48_01510 NONE
        dmeF  354022 ..  354054 +  -7.6  -3.19389   TGGAACGGCGCGATC     TGCCCGGCGTCCAGG ACCA CCTGGCC-CCGCGCG      TTGCTGAGTCCCTTG  53 201
 IUJ48_01530  356414 ..  356433 + -16.4  -3.01745   ATCGTTTCCGTTTTC            CGGGCGCC GCAA GGCGCCCG             TGTCGTTGTTGCCGC  85 109
 IUJ48_01535  358333 ..  358372 +   -22  -3.25823   GAGCTGACCTGGCCG  GCGGCGCGCCGCCGTGCC GGCT GGCCCGGCGGCACGCCAC   TTGCTGTAGGACCGG 100 34
 IUJ48_01540  358726 ..  358756 +  -3.8  -2.53015   GCCTGCCTGATGTCG       GAAGCGCGCCGC CGCTGAT GCGGCGCAATCC       TCGATTCCAAGATAT  41 8
 IUJ48_01545  359555 ..  359580 + -13.3  -3.01712   CAGCACCGCGGTGCC         GCGCGTCAGCGC GAT GCGCTGGC-CGC         TGTTGGCGAACAGCA  69 381
 IUJ48_01560  361935 ..  361970 +   -11  -4.20367   TCCCGCCGGTGCGGC    GGAGCGGG-CGCGGCCA GGG TGGCCAAGACCCGCGCC    TTATTTCTTCCCGGG  88 62
 IUJ48_01575  364950 ..  364964 +  -8.5  -4.62471   CGAACACGCCGAACA               GCGCC AGCGC GGCGC               TTTTTGCCCCTTCGA  83 132
 IUJ48_01585  367052 ..  367064 +  -4.7  -3.16921   CCGGCCTGCGCGTCA                AGGCG GCG CGCCA                TTGATCCCAATTCCT  47 9
 IUJ48_01590 NONE
 IUJ48_01595  368387 ..  368397 +  -8.2  -3.02511   GGCATTCCTGCGGGC                 GGCC TAG GGCC                 TGTTCACACGATAAG  56 19
 IUJ48_01605  371979 ..  372000 + -17.3  -3.80855   GCGTGATTCCCCTGT           TCCGGCGGC GATA GCCGCCGGA            TTCATTTTTGACGAC  93 35
 IUJ48_01610  373506 ..  373531 +  -7.4  -2.74192   TCAGCTGTCTTGCCA         CCCGCGCCGC CAGCCA GCGGCCCGCG          TCCTGTTCGACCATG  49 416
 IUJ48_01620  375568 ..  375594 +  -4.4  -3.72027   CGCCATGCCCTGCAC        GGCGATCACCG AGCCGG CGGCGAT-GCC         TTGTTCGTCGGCCGT  55 227
 IUJ48_01630  377780 ..  377798 +  -2.4  -5.09225   CCGTTCACCGACTTC            GCGCTCG ACATCC CGAG-GC             TTTTTTCCATGACAT  79 135
 IUJ48_01635  379436 ..  379471 + -10.4  -3.74872   GAACGAACCCATCGA    TCGCGCCGTGCCCATGC ACA GCGTGTGCACCG-GCGA    TTTGATGAACTGCAT  71 392
 IUJ48_01660  383842 ..  383862 +   -14  -3.54424   TTCATAGTCCCGCAA            GGCCTGCC CCAGC GGCAGGCC            TTTGCACACCTGCGC  78 180
 IUJ48_01670  386065 ..  386092 +  -9.8  -3.02263   TCCGGATAGGATTCA        TTGCCGCCCAGCC CCA GGCCGG-CGGCGA        TGTTCAGCGACATCT  59 218
 IUJ48_01680 NONE
        dkgB  391306 ..  391325 +  -3.5  -3.55444   CGGCCTGGGACTGAG            GCGCG CCATGGACAA CGCGC             TTTCAAGCCTGACCG  49 27
 IUJ48_01710 NONE
 IUJ48_01715 NONE
 IUJ48_01720 NONE
 IUJ48_01725  395267 ..  395292 + -13.3  -3.01712   GCGCCAGGTAGGCCG         CGGCGGCGTCGG CGT CC-ATGCCGCCG         TGTTCCGCCACCACC  69 163
        nirB NONE
        nirD NONE
 IUJ48_01745  404517 ..  404533 +  -9.3  -3.31144   TGAAGGGCGCGCCAT              GGCGCCG CAT CTGCGCC              TTCTCCAGGTAGAAA  59 406
 IUJ48_01755  406118 ..  406134 +  -2.2  -3.05268   GCTGTCACTTCGCAT              TCCTAG ACTCG CTGGGG              TCTTGCCGATGCTTC  42 121
 IUJ48_01760 NONE
 IUJ48_01765  408889 ..  408908 +  -2.8  -3.63515   CGGCCTCGCGCAGGT            CG-GCGC CCTCGAA GCGCACG            TTCTTGAGGGTGGCA  50 284
 IUJ48_01780  411536 ..  411552 + -10.9  -2.70932   CGGTGAAGAACAGCG              CATCCAC CAG GTGGATG              TAGTTGGGCAGGGGC  59 196
 IUJ48_01790 NONE
 IUJ48_01800  414630 ..  414642 +  -9.1   -3.2614   GAATTCCGCGAACTC                CGGCA GGT TGCCG                TTGCTGTAGGCGATG  59 495
 IUJ48_01810 NONE
 IUJ48_01820  418501 ..  418516 +  -2.5  -3.54741   CGTACGAACCATAGG              CGTAC AGGTTG GTGCG               TTTGGACAGGTCGTA  50 108
 IUJ48_01865  429702 ..  429733 +  -3.1  -3.86897   TAGTTGTCAGGGTGC     TC-CAGCGTGGTGCGC GAG GCG-GCCA-GCTGCGA     TTTGTCGGAGGTGAA  56 475
 IUJ48_01880  433214 ..  433251 +  -7.6  -3.61398   CCGCCACGCGTTCGG  CGCCGGCCTCGCGCAGCG CCTG CGCCGC-CAGGGCC-GCG   TTGTTCAGGAAGCAA  60 483
 IUJ48_01895 NONE
 IUJ48_01900  436075 ..  436099 +    -3  -4.36914   ATACCAAGCTCTCGG          TGTTTGAAAT TTTTT GTTTCAAATA          TTTTATCGAGACGCA  66 63
 IUJ48_01905  438851 ..  438893 +  -8.3  -3.30124   CCCAGTCCGCCACGT GGCGGGGCGCG-GCCGCG GGCGGCGG CGCGGCGCGGTCTTCGCC TTGTGACGGATACGG  59 251
 IUJ48_01915  440642 ..  440676 + -11.2  -4.07568   CGGCGTGACTTCGGT     CGGGCTGCGGCCCGCC TCA GGCCGGCTGTCGACCG     TTTTGCCGCCGCGAG  79 176
 IUJ48_01935  443754 ..  443772 + -17.4  -5.75342   CGGCACGAGCAAGAG             GGCCCGCC CAT GGCGGGCC             TTTTTTTTCGCCGCG 100 44
         tam  445967 ..  445979 +  -3.3  -3.53012   GGCGCCAGGTCGGCC                AGGTG CGC CACCA                TTTCGCGCACCAGCG  49 504
 IUJ48_01955  447656 ..  447673 +  -4.7  -4.07568   AGACCGGCGCATGCC             GGGCGCG CAGG CGCGTCG              TTTTAGCCGCCGGCC  64 40
 IUJ48_01970  450084 ..  450112 +  -2.2  -3.63515   TCTTCTTGGCGATTC       CCGGAGGCAGCGG CTTG CCGC-GCGCCAGG        TTCTTGCGGATGCCG  50 197
 IUJ48_01980  451694 ..  451724 + -25.6  -3.05294   CCAGCCTTGCACGAT       GATCTCGGCGCTCG ATT CGAGCGCCGAGATC       TGTTCCGGCGTTTCG 100 129
 IUJ48_01990  454217 ..  454234 +  -4.7  -3.38991   TACTAGTGGCAATGG             CTCGGCG GCAG CGCCAGG              TGTTCTTGCGGGAAT  51 35
 IUJ48_01995 NONE
 IUJ48_02000 NONE
        fhuE  458851 ..  458869 + -10.2  -2.62184   AGCATGCGGTCCCAT             TGCGCCGG GTC CTGGCGCG             TGATGTCGCCCAGCA  55 499
 IUJ48_02015  460131 ..  460142 +  -2.2  -2.78596   CATTTAGATTGCTCG                CGAGC TGC GC-CG                TGTCCTCGACCGATA  38 95
 IUJ48_02020 NONE
 IUJ48_02025  461688 ..  461729 +  -6.3  -3.06183   TCCGGTGTACCGGGT GAATCGTCGCGGCCAGGCC GCGA GGCCCGCCCACGAAGGATC  TTCCATGCCCGTCCG  49 73
 IUJ48_02030  464686 ..  464737 + -12.4  -3.05596   CGTAGCCGGGGCGCC GCTC-GGCCCA-GCCTTCCT-GCGC CACGC GCGCCAGCAGGGCCTGGGCCTGGGC TTGCGTCAGGCCATA  66 524
 IUJ48_02055  470385 ..  470403 +  -6.6  -2.78384   GCGATCAGCGAGGCA             TTGGCGGC CGC GCCGCAGA             TGTAGTCGGCCCGCG  46 349
 IUJ48_02065  471976 ..  472013 +   -12  -2.65993   GTTGCCGCGCCAGTG   CGCGGGCGTCATGCCGA AGGCC TCGGCGTGGCGGC-GCG   TCATGTGGCTCTGGT  62 510
 IUJ48_02095  476060 ..  476088 +  -2.9  -3.44051   CGAGCGACACCGAGA        CGATGGGGGCGCC GTA GTCGCGCTCGTCC        TTGTCCTGGTGCAGC  47 249
 IUJ48_02115 NONE
 IUJ48_02120  480561 ..  480592 + -13.8  -4.25104   ACCGCCGCCCGTGGG      CGGGAAATAGGCGGA TTA TCCGCC-ATTCCCCG      TTTTCCTGCGCGGCG 100 449
 IUJ48_02135  482509 ..  482532 +  -6.7  -3.07816   CCAGCGGCGCCGCTT          CGC-AGGCTG AGCCA CGGCCTTGCG          TTCCCTCAATCGCCC  51 16
 IUJ48_02140  482980 ..  482998 + -11.6  -3.01712   GCGTGAATCCGTGGC             CGCCAGCG GGC CGCCGGCG             TGTTGCCGGCCGCCG  65 190
 IUJ48_02145  484095 ..  484110 +  -5.4  -2.83271   GAACGAGATGCCCAT              C-GCCTG GAT CAGGCCG              TCCTTGTCCAGGTGC  44 279
 IUJ48_02160  486467 ..  486518 + -11.4  -3.01712   AGCGCGAACGCCATG GCGCCGCCGGTCAGC-GCGATGCGC AGC GCCCGTTCCGGCTGGCCGGCGCCGA TGTTGGCGCCGACCA  62 442
 IUJ48_02170  488124 ..  488137 +  -9.5  -3.33696   GCGGTTGACGCGGCG               CCGGC GCGG GCCGG                TTCATTCCCGCCGCA  64 33
 IUJ48_02195  494069 ..  494098 + -13.5  -3.81755   GGCCGGATGGCAAAA       CGCCCGCTTCATC CTGG GATGTCGCGGGCG        TTCTCTTTGGCCGAT  86 69
 IUJ48_02215  497826 ..  497851 +  -5.4  -3.61398   GCGGCAGGCCGGCGT         GTTCACAGGCG GAATA CGCCAG-GAAC         TTCTTCCAGCGCAGG  54 131
 IUJ48_02285  510709 ..  510749 + -14.5  -5.63504   TGCTGCCCCCCGAGG  GGGCTGCCCGGCCTTCGGG CGG CCGGGCGGCCGGGCGGCTA  TTTTTTTGTGGCGTT 100 71
 IUJ48_02305  514419 ..  514444 +  -5.3  -3.72576   CTTCTTCCGGGTAAA         TGGCGCGCTTG CAAG CAGGAACGCCA          TTTGCTGCCACCCCA  58 48
 IUJ48_02310  515189 ..  515214 + -11.1  -3.77832   GCCGTCAGCGCCACG         CCGCCAGCGGCA GCA TGCCGCCG-CGG         TTCTTCACTTTCCGC  77 47
        kynU NONE
 IUJ48_02325  518510 ..  518546 +  -7.7  -3.57144   AGCGCTCCTAGCGAT    TGCGCCGGCGGACTCGC CCG GTGTTGCCGGCGGCGCG    TTTCAAACTGCGCCC  63 30
 IUJ48_02335  520913 ..  520934 +  -8.7  -3.14132   GCACATGGCGTCGAA           GCTGCGC AGCTGCAC GCGCAGC            TTGATCGGCCCGCCC  56 243
 IUJ48_02345  523440 ..  523467 +  -5.6  -3.55071   CGCTCATCTTAGAAA        GACATGCTGTCAG ATT TTGTCAGCA-GTC        TTTGGCCGGATGTCG  55 457
 IUJ48_02370 NONE
 IUJ48_02375  527806 ..  527823 +  -6.9  -2.62184   GCCTTGCCACCGCGT             TGGCCGC GCCG GCCGCCA              TGCTGTGGCCGGCCG  47 241
 IUJ48_02380  530293 ..  530329 + -11.5  -4.27316   CGTATCAATACTGAC   CCGCG-CTGCCGCCGC GCGTCA GCGGCGGCAGTCCCGA    TTTTCCATTCCGGCC  88 27
 IUJ48_02385 NONE
 IUJ48_02390 NONE
 IUJ48_02395 NONE
 IUJ48_02400  534060 ..  534075 + -11.8  -4.75472   AAATGGGGCAATCGC              GGCGGC CGCG GCCGCC               TTTTCTTCATCTACC 100 59
 IUJ48_02405  534852 ..  534876 + -18.6   -3.6682   TGCGTCGCCCGCAAA          GACCGGCCGC CCTGC GCGGCCGGTC          TTTGCATACGTGGGG  93 288
         ogt  537655 ..  537687 +  -3.3  -2.93723   AGCGCCGGTCGAAGA      TCAGCGTGAACGCCA GCG TGGCGATGATGATGG      TGTGGTTGCTGGGAA  42 339
        atzF NONE
         uca NONE
 IUJ48_02490  558169 ..  558186 + -12.7  -3.38522   GGGGCCCGCCAAAAA             CGGCTGC GCGG GCAGCCG              TGTTTGGCATACATC  77 291
 IUJ48_02520 NONE
 IUJ48_02525  564404 ..  564434 +  -8.8  -3.07043   CGGCGCGCGCCCAGC       GCCTGGCGCGCGGC GAT GATGCGCGCCACGA       TCTTAAACTGCTGCG  55 484
 IUJ48_02565 NONE
 IUJ48_02570 NONE
 IUJ48_02575  574459 ..  574493 + -11.5  -2.57344   TCGGGCGCGCCCTGG    GCCAGCTGGCGCGCGTG CAG CACG-GCG-CGGTTGGC    ATTGTCGGAACCGTC  59 421
 IUJ48_02600 NONE
 IUJ48_02605  578090 ..  578104 +  -5.7  -3.62096   GCTGGTCGGATTGCT               CGCTA TCGGT TAGCG               TTTAGGCTCCTGCCA  57 13
 IUJ48_02610  578830 ..  578843 +  -5.2  -5.44119   GCGGGCATGAAAAAA               CGGC CGTGAA GCCG                TTTTTTTACCGTGAG  93 31
 IUJ48_02650  589348 ..  589370 +  -6.1  -2.92026   GAGGCATTTTCCTAG           GCGCGCCGC CGCGT GCGCCGGGC           TATGATGTTCCCATG  48 26
        moaA NONE
        mobA  591414 ..  591426 +  -2.6  -3.30441   CGGATTGCCCGGCAG                GCTG ACCAC CGGC                TTGTCGCCGATCATG  45 346
 IUJ48_02690  598050 ..  598083 + -13.2  -2.52464   TGAAGTGAACCCCGG    CGGTTCGCCAGGACGC GCCC GCGTCC-GGCGG-CCG     TCCCTTGCCCGGAGA  67 33
 IUJ48_02695  599048 ..  599091 + -20.2  -2.74461   GGAGAGATCTTGCGT TGCCCGCCGGGACCGGCTGC GCGG GCAGCCGGTCCCGGCATACG CTTTGGCGGTGCGTC  93 84
 IUJ48_02705  600758 ..  600771 +  -2.3  -2.90075   CAGCGACGCCGCGAC               CCTGC TGTC GCAAG                TCTGATTCCCCGCGC  40 7
 IUJ48_02710  602602 ..  602628 +  -3.4  -2.90075   CCAGCAACAGGCCGC         CGGCGAACGCGG TGC CGGCGCGCGCCA         TCTGCTTGAACAGGA  42 359
 IUJ48_02760  608408 ..  608430 + -11.9  -3.27298   CCTGTGAAGTGGAAC           CGGGCCAGG CAGAA CCCGGCCCG           TTCCTGGTTCAGGGG  71 123
 IUJ48_02790  614996 ..  615016 +   -14   -4.4078   GGACTTCAATGAAAA            TGGCCGCC ATGCA GGCGGCCA            TTTTCATTGGCGGCA 100 64
 IUJ48_02830 NONE
 IUJ48_02835  621739 ..  621784 +  -7.3  -3.97042   CGGTCGGCCGCGAAC TGCGCGCGCCAGGCGTCGAAG CGGC CCTCGGCGATGGCCTCGCGCA TTTCCTTCATGATGG  69 109
 IUJ48_02855 NONE
 IUJ48_02860  626603 ..  626615 +  -6.9  -2.64107   GCTTTCCTGTCGCAC                CGGGG GGA TCCCG                TCGTATAACGCTTTC  47 5
 IUJ48_02865 NONE
        dacB  629457 ..  629467 +  -3.2  -3.28924   ATTACGATTCTCGGG                 CGTG CGC CATG                 TTGTGGCGGCGCCTG  45 78
         upp  630352 ..  630395 + -13.9  -4.18018   CCAGTTGCGGCAGGT CGCGCAGCGCGCCCGA-CAGC ACCC GCTGCTCGGGCCGGCTGC-CG TTTTCGATCAGCGCG  93 212
 IUJ48_02885 NONE
        ntrB NONE
 IUJ48_02895  635486 ..  635507 + -14.4  -2.68546   GTAGTATCAAGCCAG           CCGCGCGC GGACCG GCGCGCGG            TGCGTTTCCTGGATT  71 198
 IUJ48_02900  636282 ..  636309 +  -6.1  -2.90054   GCACACGGTAGCAAG        CCGGCCGGGCC CATCGC GGAGCGGCTGG         TATGATGGTTTCGTC  47 40
 IUJ48_02905  636675 ..  636727 + -31.4  -4.11692   GCCGCTGACAAGGCA GGACCTCCGGGCGGGCGGCGCCGGCC TTT GGCCGGC-TCGCCCGCCCGGTG-TCC TTTTGGCCATGGGTC 100 33
 IUJ48_02910 NONE
 IUJ48_02915  637534 ..  637561 +   -20  -4.07568   CTGCGTCCCCCAAAA        GAAAACCCGCCG GATA CGGCGGGTTTTC         TTTTGGGGCGGGGGA 100 50
 IUJ48_02925  640214 ..  640250 +  -3.9  -4.45664   GCTCAATGACTCGGT  CGCGCGCCATT-C-ATTG AAGG CGATCGGAATGGCGC-CG   TTTTCCTTGACTTGC  70 185
 IUJ48_02945  645140 ..  645169 +  -4.8  -3.72576   CGCGGCCATGGCGGC       CGTGCGCGCCGG CGGCCC CCAGCGGGAACG        TTTCGTCCGGCCCGC  58 65
 IUJ48_02950 NONE
 IUJ48_02955 NONE
 IUJ48_02960  649582 ..  649594 +  -6.9  -4.07568   CGCGATGCGCTGCCA                GTGGG CCA CCCGC                TTTTCCAGCCGCGGG  66 398
         tkt NONE
         gap  653915 ..  653960 + -22.7  -3.34013   CGCTGTCGGATCGAA GGGGACGAACAGGTTTTCCGC CACG GCGGAAAGCGGGTTCGTCCCC TTCGTTCGCCAACTC 100 45
 IUJ48_02985  655211 ..  655230 +   -15  -5.86061   CCGCGCGATGAAAAA            GCCGCTCC GAAA GGAGCGGC             TTTTTTTTCATGGGC 100 50
 IUJ48_02995  658449 ..  658464 +    -6  -3.03124   TCGAACTCGGCAATG              CCCGAG GCGG CGCGGG               TCTTGAGCGGTCCGG  48 227
 IUJ48_03040  667032 ..  667051 +  -2.7  -2.82516   CGACCTGCCGTTCAA            CCCGCGG CGCCAC CTGGGGG             TCTGATCATGAAGAA  40 1
 IUJ48_03045 NONE
 IUJ48_03050  668233 ..  668261 + -13.8  -3.56643   CGTCGGAAAGCCCGA       GCCGCGCAGCCGC CCGA GCAGC-GCGCGGC        TTTCGGCAATGTGGC  78 143
         mog  672691 ..  672707 +  -2.9  -2.68436   CCGTCGCCGGACGCT              GCGGT ATAGTTG GCCGC              CTCTTTCCATTCATT  40 17
 IUJ48_03075 NONE
 IUJ48_03080  674418 ..  674469 +  -8.5  -3.85817   CGGGCGGGCTTAAGG CCGCGTGGCGCGCCA-GGGCGGGGC GGAA GGCCGGCACATGCCG-GCCCCGCGG TTTCTCAGCGGCGAT  69 473
        phnC  677684 ..  677699 +  -2.5  -3.68351   GGCCTGACCTTACCC              GTTCC CTACCC GGAGC               TTTCCATGCTACGCA  50 34
        phnD  678685 ..  678741 + -23.9   -5.0916   GACCGCCAAGCAGTA AC-GATGCCACGCGGCGCCGGCGCTTG CCCGT CAAGCGCCGGCGCCGCGTC-CATCCGA TTTTTCTATTCCGGA 100 25
        phnE  679563 ..  679584 + -18.7   -3.6682   GTTGATCTGAAGGCC           GGGGCGCGC CGCG GCGCGCCCC            TTTGGCTCAGTCGGC  93 31
 IUJ48_03140  684086 ..  684111 + -12.5  -3.61398   CGATATCCAGCAATT         CGGCGGCGGCGG CTT CCGGCG-CGCCG         TTGTTGGCGACGCGC  74 105
        phnG NONE
        phnH NONE
 IUJ48_03175 NONE
 IUJ48_03180 NONE
        phnK NONE
        phnL NONE
 IUJ48_03195  693421 ..  693462 + -16.6  -4.17048   GCATCTGGTTAAATG GGCGGACGAGGACGC-CGCC AGCG GGCGAGCGGCC-CGTCTGCC TTATTTTCCGGAGCG  95 83
 IUJ48_03200  693968 ..  693994 +   -18  -2.76453   CCGACTCATGAAAAA         CGGGCCCCGC ATTCATC GCGGGGCCCG         TGCTTGCGGTTCTGG  87 77
 IUJ48_03210  696602 ..  696624 + -13.4  -3.78775   TTATGGGGGAGGCGC           CCGGCCGC GGCTCGG GCGGCCGG           TTTAGTCCTGGCGGA  84 53
 IUJ48_03215  697851 ..  697872 + -12.9  -5.95539   GGCGGGCAGCAAAAA           GGCGGCCCC TGGC GGGTCCGCC            TTTTTTTCTTTGCGC 100 64
 IUJ48_03225  699439 ..  699457 + -13.1  -5.75342   AGACCGCCCGAAAGA             CCGCCCG ATCGC CGGGCGG             TTTTTTTTACCCGGC 100 58
 IUJ48_03230  699815 ..  699838 +  -2.4   -3.6422   AGCCCGCTGGCGCTG          TCGCTGTAGGC CCC GCCGACA-TGA          TCTTTTCCCGCAATC  50 17
 IUJ48_03235  700422 ..  700438 +  -6.5  -3.53012   GGGGTGGCGCCGGCG              CCGGGTA AAA TACCGGG              TTTCGCGGCACGGCC  57 40
        purE NONE
 IUJ48_03245 NONE
 IUJ48_03250  703623 ..  703666 +  -9.3  -3.17075   TCGACGTGCAGTAGG CCGGCAGCCGGCTGCCCAG CCCCAT CGAGGTGGCCAGCAGCCGG TTCACTTCCGAGCGC  56 398
 IUJ48_03275  707882 ..  707911 + -21.5  -4.11484   GTGACGGCATGAGCC       CGGAACGGCCCGC GCAA GCGGGCCGTTCTG        TTTTCGGCGCTTGCC 100 43
 IUJ48_03280  709690 ..  709712 +  -4.7  -3.61398   CAGGCGCGGGGCGAT           CAGACGCCC AGGTA GCGCGTCAG           TTGTTCCGGCGCGGC  55 66
 IUJ48_03325  718421 ..  718440 + -12.1  -4.86731   TTCGCCGACCGCCAG            GGCCGCC CGTTGA GGCGGCC             TTTTCTTTGGCGGGG 100 52
 IUJ48_03330 NONE
        boxB  721810 ..  721821 +  -2.2  -3.59979   CCAGCCCGTGAACTT                CGAG TACG TTCG                 TTTCAACTAAGGCCC  50 4
        boxA NONE
 IUJ48_03345  723761 ..  723786 + -17.5  -4.18018   TCCACCGGCATTGAA         GGCCCGCCCGG GATA CCAGGCGGGCC          TTTTGCATGGGCCCG 100 155
 IUJ48_03350  725623 ..  725644 +  -7.2  -3.22209   TCCCATTTTTTTCCC           GCCGCCCG AATACG TGGGTGGC            TGTTCCATTTCGTGT  54 91
 IUJ48_03355  727776 ..  727787 +  -2.2  -3.92373   CGAAATGTTCTGCGC                GCGCG CGC CG-GC                TTTCTGCATCACGTC  56 503
 IUJ48_03375  732714 ..  732759 +  -2.9  -4.25848   TCCCGCGGCCGATGC CGCGCCAGGCCTTAGCGCGGCG CTC CGCTACGCCTTGGCC-GACCCG TTTTCCTGACGCCTT  64 78
        xerD  733746 ..  733778 +    -4  -3.53811   CCTGAAGGCCTTGCA     CGCGGCGCATCATCC GCGC GGCTGACGCGG-GCG      TTTGCGCGCCATCGC  51 1
        ybaK  734341 ..  734351 +  -8.2  -2.64794   GGGGCGCAGCGGCCT                 CGCG GCC CGCG                 TGGTATCCCGTTACC  53 41
 IUJ48_03390  735158 ..  735179 + -17.3  -4.56597   CCACCGCAAAACAAA           GGCGCCTGC CATG GCAGGCGCC            TTTTTGCAGGGCGAG 100 132
 IUJ48_03400  736923 ..  736941 + -14.6  -4.72272   GCCGGACGAAAAAAA             GCCCGATC CAG GATCGGGC             TTTTTCGTGGGCGGG 100 117
 IUJ48_03415 NONE
 IUJ48_03420 NONE
 IUJ48_03425  742218 ..  742246 +  -7.4  -4.08216   GTATATCATGCGGGC       AGTGGCG--CGCGC CGG GCGCGAACGCCACG       TTTTCCCGCACCTGA  71 59
 IUJ48_03430  742785 ..  742831 + -15.7  -5.48303   GTGCCGGCGCGCCGC GGC-CGCGGCGTGCAGCCGCGC TAAC GCGTGGGCGCGCGCCCCGCGCC TTTTTTTACCCTTAT 100 2
 IUJ48_03435 NONE
 IUJ48_03440  744826 ..  744851 + -10.4  -2.71712   GCAGGGCGCGATCTA         GCCATCGGGGC CATGA GCCCCGG-GGC         CTTTCCCCGCACCAC  59 25
 IUJ48_03445  745935 ..  745958 + -10.2  -4.12947   ATGAGCGGGAAAATC          TCCCGGTGGC CCTG GCTGCCGGGG           TTGTTTCATTGCTTT  79 90
 IUJ48_03450  746267 ..  746278 +  -2.2  -3.22298   GCCCCGTCCCGCGGA                CGTC GACT GATG                 TTCCTGCTGGATACC  44 16
 IUJ48_03455  746789 ..  746817 + -12.4  -3.53343   CCGTCAACCCGCCAG       CGCCGCCACGCGC CTGA GCGCGTCGCG-CG        TTTCCGCCACCAGTT  75 113
 IUJ48_03465 NONE
 IUJ48_03470  749311 ..  749321 +  -4.6  -4.57073   TGGGAAAGCCTGGCT                 TCGC TGT GCGG                 TTTTTAGCCGCGCTG  74 8
 IUJ48_03475 NONE
 IUJ48_03480 NONE
         ffs  756184 ..  756233 + -11.6  -4.37711   ACCGGTTTCTCAAAG GGGACGGGGTTGTTTTCCAAGGGG ATAT CCCC--GGAAGATGATTCCGTCCC TTTTGCATTTCCTGC  90 39
        dnaX  758568 ..  758614 +  -2.6   -2.5602   CGCCACGTCGATCCC CCTTCCGCCGCCGCGTGACGTG TAG CGCGTAACGCGGCGGCAATCCC TACATTCCCTCGTTC  38 8
 IUJ48_03495  758982 ..  759009 + -20.6  -3.59979   CTGATCGAACGTTCC        GGCCGCCGCCGCC CCG GGCGGCG-CGGCC        TTTGCCGTCCGCAAG 100 37
        recR NONE
 IUJ48_03505 NONE
 IUJ48_03510 NONE
 IUJ48_03515 NONE
 IUJ48_03520  763840 ..  763863 + -13.1  -3.73224   GACTGTCGAATGCAT          CCCGGGCGC CTTGCA GCGCCTGGG           TTTCCTGGCCCCTCG  78 160
 IUJ48_03545  768323 ..  768377 + -19.8  -3.05596   ACGATCACCGCTGAC GCGCGGCCCGGCGGTGGCCGCCGG GCCAGCG CCGGCGGTCTCAGGCGCGCTGCGC TTCGATCAGCGCGTC 100 27
        carA NONE
        carB  773950 ..  773977 +  -9.9  -2.52464   ATTGGACAAATAACG        CTTGGG-CGCGC AGGGG GCGCGTCTCAAG        TGAATTGAGGACAAA  55 28
        lpxO  774924 ..  774951 + -19.2  -5.08824   CCTGTAGCATAGCGG        GCGGAGCCTCTC ATCC GGGAGGCTCCGC         TTTTTTACATCCGAC 100 57
 IUJ48_03570  776192 ..  776217 +  -8.9  -3.01712   GTTCGCGGATGCCGG         GCTCGACCCGC ACGC GCAGGTCCAGC          TGTTCCGACACCGGC  55 464
 IUJ48_03605  783670 ..  783693 + -12.4  -3.01924   GCAAGAAATAGGACG          GGGCATGGGC GGCG GCCCATGCGC           TGTTCCGGGGCCATG  68 30
        greA  786661 ..  786679 + -13.1  -4.82901   AACGCTATGGTGGAC             CGGGCGC GTAAA GCGCCCG             TTTTTGTGCCCGGCG 100 113
 IUJ48_03625  787961 ..  787972 +  -7.2  -2.62184   AAATGACCCGCGCCG                GGGC ACGT GCCC                 TGGTGTCACAAGAAC  47 35
        ftsH  790084 ..  790104 +  -2.5   -2.6342   CGCGGTCTGAGGTCT            TTCGTCCTG ATT TATGGCGAA            TAACTTCCTTTGCGG  38 31
        folP NONE
        glmM  792310 ..  792340 + -15.6  -4.10791   GCTCCAGACCCGACA       TGGCCATTCATTGT TTC GCGATGAATGGCCA       TTATTTGTGAATATT  95 53
 IUJ48_03645  793445 ..  793466 + -17.3  -3.68359   CGTTGCACGGCAAAA           GGCCCCGGA TATT TCCGGGGCC            TTGTCGTTTTCAGAA  93 165
        ppk1  797434 ..  797471 +  -6.7   -2.9356   GGTCCGCCACCGGCG   CCCCCCTGGGGGGGAAG CGCG CAGCGCTCCGGGGGGGG    TATATGACTGTCACT  50 201
        pstS  798707 ..  798721 +  -7.8   -2.5934   GCCGGACGTCGGGGC               GGGTCT CCC GGACCC               ATTCGTCGTTTCCCC  50 107
        pstC NONE
        pstA NONE
        pstB  801488 ..  801539 + -22.3  -3.15861   CCGCTTCGGCTGATC G-GCGGCGGGAGCG-CGCCTGGCGG GCAA CCGGCGGGCGGCGCTCCCGCGGCGC TTCATCACGGTGGTA 100 28
 IUJ48_03685  803241 ..  803269 + -16.9  -5.33405   ACCAATAAAATCAAA        GGGTTAGCTCAAT GTC GTTGAGCTAACCC        TTTTTCTTTGCTGGG 100 37
 IUJ48_03690  809016 ..  809034 +  -3.8  -3.18735   CGACCAGGAGGTGCC             CTTTCAGT ATT ACTGTGAG             TTCGTCCGCTGTTGG  47 472
 IUJ48_03700  812081 ..  812129 + -11.5  -2.62396   GATCCCCGGACCTCA GCGCATGAGCGACTGCCTCGCCT AGT AGGCATTGCCGCAGCTCATGCGC TGATGTCCGGCGGTC  62 429
        pcaF  814990 ..  815001 +  -7.2  -3.53012   ACCGCGTCATCGGGC                GCGG TGGG CCGC                 TTTCCCGAACGAGGA  57 60
 IUJ48_03715  817027 ..  817040 +  -2.3  -3.40403   CCTCGGGATAAACCG               GCTAC GCCA GCAGC                TTGTAGTGCGACACG  45 318
 IUJ48_03730  819001 ..  819035 +  -3.5  -3.65522   GACGCGCCTTCATGG    GTCGCG-GTACGGTGG CCAT CCATCGTTCCCGTGAG     TTGTTCAGCTACCTG  51 389
 IUJ48_03735  820096 ..  820110 +  -5.6  -3.34517   GCCCGCGACTGGAGT               TCCGTC AAC GACGGC               TCTTTGCGCGGCCAT  53 525
 IUJ48_03750  823413 ..  823436 +  -8.3  -3.14132   GTATTTTTAAAATAA          TTTACGTCA TGATCT TGACGTAAA           TTGGTGGAACGAGGA  57 274
 IUJ48_03755  825501 ..  825521 +  -3.1  -3.53811   TCGACCAGGCAACGC            GTCTGGCCG TTT CGTTCTGAC            TTTGCCAGCCCTAAC  49 6
 IUJ48_03760 NONE
 IUJ48_03765 NONE
        badI NONE
 IUJ48_03775 NONE
 IUJ48_03780 NONE
 IUJ48_03785  831425 ..  831446 +  -3.7  -2.85361   ACGACCCAGGCGTCC           CATTCGGCT GGAG AGTCGAATA            TAAATTTTTCCATCC  43 79
 IUJ48_03790  833396 ..  833412 + -10.9  -3.21276   GAGTAAATCTCTTAT              TCACAGC ACT GCTGTGA              TCTTGTCAGAAGGGG  68 124
 IUJ48_03800  834655 ..  834681 + -13.7  -5.29716   GCTGTTACCTCATCA        CGCCGCG-GCGC GCTC GCGCATGCGGCG         TTTTTATTGTCTTCG 100 77
 IUJ48_03805  835120 ..  835134 +    -7  -3.53012   AAGGATGGCTCCTTC               CGGCGC ACG GCGCGG               TTTCGGGGGCCAGAC  57 145
 IUJ48_03815  837718 ..  837733 +  -3.2  -4.16284   TTGCACCCGAAATCT              TGACCG TCGC CGGTTG               TTTCTTGACGGCTCT  60 269
 IUJ48_03820 NONE
 IUJ48_03825 NONE
 IUJ48_03830 NONE
 IUJ48_03835 NONE
 IUJ48_03840  844401 ..  844411 +  -4.6  -2.62263   ATTGGCCGAACTGCG                 TGCC GCC GGCG                 TGCTCTGACCGCAGT  43 7
 IUJ48_03845  845011 ..  845027 +  -3.7  -4.25676   CACTTTAGGAGACAC              CAATGAA ATT TTCCTTG              TTTTCGGGTTTGCTT  66 88
 IUJ48_03850  845988 ..  846008 + -10.3  -3.01791   GAATAAAGGTCGGAC            CGCGCGTCC GCC GGGCGCGCA            TCTTCAGGCGAAACT  62 35
 IUJ48_03855 NONE
 IUJ48_03860  847828 ..  847847 +  -4.2  -2.91276   ATGGATCGGAGCGTA            GCCATGGCT TGC AGCCC-GGC            CTTTGTCCGACGCGA  43 25
 IUJ48_03865  848911 ..  848924 +  -2.3   -3.9461   CCTTCGATCATGTCA               AGCAG TTCA CTGCG                TTGTTCTTGCGGGCG  56 305
 IUJ48_03930 NONE
 IUJ48_03935 NONE
 IUJ48_03940  861565 ..  861593 +  -3.2   -3.9444   GGGACTGCCTGCCCG        GCCAGCAA ATTCAACAGACCC TTGCTGGC        TTTGCTTCGGGTTTC  56 81
 IUJ48_03955  864242 ..  864253 +  -3.6  -3.35849   GGGAGTACCACGAGG                CTCG CATG CGGG                 TGTTGATTTGATAGG  47 3
 IUJ48_03960  865236 ..  865252 +  -5.7  -4.18018   CTACTCAGGGAGGCC              GCCCTCG TAT CGGGGTC              TTTTCAGTGCGACGC  66 110
 IUJ48_03970  868042 ..  868064 +  -2.7   -3.8823   CGGGAAATGATTGGT          GCGAGGGATC ATCG GATCCGT-GC           TTAATTTGTTTTTGT  55 58
 IUJ48_03975  868749 ..  868770 + -14.5  -4.67651   GCATGCGTCCAAGAA           CCGAAGACC GAAC GGTCTTCGG            TTTCTTTTACGCTGT 100 142
 IUJ48_03985 NONE
 IUJ48_03990 NONE
 IUJ48_03995  872986 ..  873014 + -15.9  -2.71416   AAGAACGTGAACGAA        GCCGCCATCGCGC CCA GCGCGAAGGCAGC        CTTGTGTCCGTCGTA  74 187
 IUJ48_04015  876037 ..  876047 +  -5.4  -3.29461   CCTTGACCGCCTTGA                 CGAA GTC TTCG                 TTGTCCCAGGCATTG  49 390
 IUJ48_04035  879948 ..  879977 + -16.3  -2.60496   GTAGAATCCTGGAAC       CAGGCGCGGCCGG CCAG CCGGCCGCGCCGC        CTATTTCCGGGAGCC  81 106
 IUJ48_04040  880963 ..  880978 +  -6.8  -3.53091   TGCAGCGCGGCTGCC              GTCTGC CAAT GCAGGC               TTTCGAGGCGGGCGT  55 104
 IUJ48_04065  884986 ..  885014 + -13.2  -3.78004   GCGCATCGGCGAAAT       TGTC-GCGGCTGG CGCC CCAGCCGCCGGCA        TCTTTCTTGTAATCG  82 368
 IUJ48_04090  891321 ..  891350 +  -4.8  -2.64794   AGGCCCCCGGTGATG       CCGGAGATGGCG TTCAGC CGCGCTCGCCGG        TGATGTAGCGTTCGA  43 46
 IUJ48_04100 NONE
 IUJ48_04105  893138 ..  893188 + -16.3  -2.57211   CTGGATGCGCTGGCG GGCATTGAGCTGGTCGCGCACG ATCAGGCC CATGCGCGAC-AGCTCGGTGCC GTTGTCGGGCGAGAT  73 443
 IUJ48_04135 NONE
 IUJ48_04140  899520 ..  899534 +  -3.4  -3.36452   TCCGGTTCGCAGTCG               GTCGCC GCG GGCGGA               TTCGTATTAACCCCT  47 45
 IUJ48_04145  901414 ..  901450 +   -13   -3.6422   GGACTTGTTCGAACC   CGTCGGCCCTGGCAGGAG CCT TTCC-GCCCGGGCCG-CG   TCTTTTGCGGCAATG  81 90
 IUJ48_04150 NONE
 IUJ48_04155  902495 ..  902505 +  -6.8  -4.12942   CGGATTCCCGGAAGT                 CCAC CAT GTGG                 TTTTCGACGGTTTCC  69 205
 IUJ48_04165 NONE
 IUJ48_04170  904813 ..  904826 +  -3.7  -3.25942   GCGCATCGGTTGACA               GCGGC AGCG GCAGC                TTGATCTGCACCAGT  47 396
 IUJ48_04185  910087 ..  910119 +  -8.3  -3.53012   GCTGGCGCGCCAGCG      TTTCGGCGGTGTTGT CGG GCAGCGCCGCCGCGG      TTTCCGGCGAGGCCA  61 450
 IUJ48_04195  911172 ..  911201 + -12.1  -3.44229   GGTCCATGGCGGCGA       GCAGG-CGGGGCGG CGT CCGCCTGGGCCTGC       TTGTAATGCTGCCAT  75 51
 IUJ48_04200  914041 ..  914076 +  -4.6  -3.38272   CTGGGATCGGTTGTG    GGCTTGGGTAGAGGGA CTCC TCCCTGTGTCCATGAC     TTCTGACTACTGATC  51 93
 IUJ48_04205 NONE
 IUJ48_04210  914313 ..  914363 +  -7.6  -4.25283   TGGTGGGATGTAGAG GCTAACTCATAGTGTCGTGCGGAT AAT ATCTGCCCGGTCTTATGAGTTGGG TTTTACTCAACAGCT  75 52
 IUJ48_04215  917630 ..  917646 +  -2.3  -2.87881   CCAAGATTGGAGCGG              TTGTC CCTCAAA GACAA              TCTCTCAACCCGTTA  40 192
         rrf  917787 ..  917820 + -20.5  -4.82901   CAGGCTTTTATTGCT     CAAAACCCCATAGGC TCGC GCCTGTGGGGTTTTG      TTTTTATGAAAAGCC 100 36
         rrf  918084 ..  918107 + -19.6  -5.26875   TATTCAAGAAGAAAA          CCCCGCAGGC TGAC GCCTGCGGGG           TTTTTTCATTGGCGG 100 44
 IUJ48_04240  921086 ..  921099 +  -2.3   -3.5393   CGAGGCCGGGCGGGT               CGTGG GATG CCAGG                TTTCGAGCAGGTAGT  50 227
 IUJ48_04260  923633 ..  923647 +    -7  -3.07222   GCCGGTTGGCGTTGA               GCGCGG CCG CGGCGC               TATTGGCGTGATGCT  52 287
 IUJ48_04270  925939 ..  925959 + -15.4  -3.75153   GCTAAGGTTGGCCGT            CCGGCGGC GCCTG GCCGCCGG            TTTCCGTTGACCAGA  90 90
 IUJ48_04275  927423 ..  927444 +  -8.7  -3.05384   AGGTTGCGCGCTGAA           TGGCGGC GTCAGCCG GCCGCCA            TTCAGTACGCAGCAG  57 56
 IUJ48_04335 NONE
 IUJ48_04340  939541 ..  939572 +  -2.8  -3.10796   CGGCGGCGGAGCGGG      CTGAACGCCGTCGC ACCC GCGGCCGCTTTTCG       TGTTAAATGATCCCC  43 22
 IUJ48_04345 NONE
 IUJ48_04350  942764 ..  942789 +  -5.3  -4.07885   GCAGCAGCAGGCGGT         CGCGC-GACAGC AGC GCGGTCTGCACG         TTTTCCAGCACGGTC  63 467
 IUJ48_04385  949905 ..  949921 +  -2.1  -4.66833   GAGGACGTCGGCGGC              GCGCGCT GAA AGGGCGG              TTTTTGCCCTTCAAA  70 17
 IUJ48_04390  951344 ..  951393 + -10.8  -4.66833   TAACCCCCGCCGCCT TTCCGGC--GGTGGTCCGTTCCGG CTGG CCGGGACGGACCATCGGGTTGGAC TTTTTCCCCTTGGGA  91 38
 IUJ48_04395 NONE
 IUJ48_04400  953847 ..  953879 +  -6.1  -3.05343   GCCAGTCCGGATATG      ATGGCTGGCCGGCAA CGA TCGCCGGTTCGCCAC      TATTCGGAATATCGG  49 105
 IUJ48_04405 NONE
 IUJ48_04410  955525 ..  955543 + -11.6  -3.14344   TGTCGTGGAACCACG             CCAGCGCG CGG CGCGCCGG             TTCGTCGCGCGCGTC  64 244
 IUJ48_04460  966950 ..  966976 +  -4.9  -3.14132   CATGGCGCCGGCGAT         CAGGCCGGCGC AGGCG GCGGCGGCCAA         TTCGTCCAGGCCGGG  47 484
 IUJ48_04475  970104 ..  970130 +  -2.9  -3.60627   AACGGTCCGCCCGCG        CCGGACTCGCCA CGCT TGTCG-GTCCGC         TTTCCGGTCGCATGG  51 98
 IUJ48_04480  970993 ..  971004 +  -5.8  -3.53012   AAGTCCTTACAACAT                CGGA CTGG TCCG                 TTTCCACAGACCGGA  55 55
 IUJ48_04485 NONE
 IUJ48_04490 NONE
 IUJ48_04495 NONE
 IUJ48_04500  975489 ..  975512 + -15.2  -5.40072   TAGCGCCGTCATCCC          GGGCCGGCCC AGCG GGGCCGGCCA           TTTTTTTCCCAAGGA 100 38
 IUJ48_04505  977014 ..  977039 +  -2.5  -3.66784   GCGCCTGCAGGTGTC         CCTCGAACGGCT CGC GGCTGTA-GAGG         TTGTATTCGGGCTGG  50 427
 IUJ48_04515  978826 ..  978856 + -16.1  -5.26907   GCGCAAGTCGTTCGG       CCCCGCCCGTGCC TGCCC GGCATGAGCGGGG       TTTTGTTTTATCTTG 100 42
 IUJ48_04520 NONE
 IUJ48_04525  980916 ..  980963 + -35.8  -3.89346   CCTTGAGCGGCGCAA GCAAAACGCCCGGCGCGGCCTC TCCG GAGGCGGCGCCGGGCGTTTTGC TTTCTGCCATGGCGC 100 54
 IUJ48_04545  986015 ..  986058 +   -11  -3.25823   GCTGGCCGCCGGCGT GGTCAACGCCGCCTGCCTG ACCTGAG CGGCCAGGCG-CGTCGACC TTGATCTGAAACAGG  68 1
 IUJ48_04550 NONE
 IUJ48_04555 NONE
 IUJ48_04560 NONE
        speD  989186 ..  989201 +  -3.4  -3.90291   CAAATTGACGGGCGT              TATATA CCTA TATATA               TTTCGTTACCGAGAT  56 98
        modA NONE
        modB NONE
 IUJ48_04580  991798 ..  991836 +  -2.3  -3.76125   CCTGGCCGCCGGCGA  TGCGCAGCAGGACTTCGTC GTT GACGGCGCCC-GC-GCGGA  TTTCCATTACCGTGC  53 429
 IUJ48_04590  993027 ..  993050 +  -2.2  -3.34398   CCGCGCCGCAAGTGC          CGGACAAGAG CAAG CCCTAGCCCG           TGTTTCGAAGGAACC  45 6
 IUJ48_04595  994421 ..  994432 +  -4.4  -4.66833   GGTGGAGACACCGAC                GATG ACCG CATC                 TTTTTCCCATTCCCC  75 180
 IUJ48_04600  994978 ..  994989 +  -2.2  -3.72576   TGTCACAGGCGGGGC                GCAG GGTT TTGC                 TTTGATCGCAAACAA  53 138
 IUJ48_04605  996390 ..  996408 +   -16  -3.48269   AAATCGTAAGCGGCT             CGCAGCGC AAT GCGCTGCG             TTCCTCTTTGGTGAG  90 32
 IUJ48_04610 NONE
 IUJ48_04615 NONE
        pdxJ NONE
 IUJ48_04625 NONE
        nagZ NONE
        uvrC 1005252 .. 1005263 +  -7.2  -3.14132   TGCGCGGATAGGGCT                CCGG ACGG CCGG                 TTCGTGGCCGCCCGG  51 30
        pgsA 1006012 .. 1006029 +  -9.1  -3.14132   TCGCCACAGGGACAA             CG-CCGGC CCG GCCGGTCG             TTGCTGGAGACAACC  60 137
 IUJ48_04645 1007389 .. 1007447 + -23.9  -2.72511   GCGTTCCTGACGCGT CCGCCGTCGCAGCAGGCAGAACGCCGCC CTCG GGCGGCGTTCTGCTT-TGGGGCCGGCGG ATTTGCCGCCGTCCC 100 31
 IUJ48_04655 1009761 .. 1009777 +  -3.7  -3.90744   GCTCCGATGTAATGA              CCTTG AGAGCGA CAAGG              TTATTTCAACAGGAG  58 172
 IUJ48_04660 1010854 .. 1010872 +  -2.4  -5.52384   ATAAAAAAAACGTCC            GCCTTCG GGCGGA CGA-GGC             TTTTTTTACTGGCGC 100 76
        aceA 1013400 .. 1013421 + -10.1  -5.40072   GTTGTAGGGTGGATT           CAGGGTGCC TTCG GGCACCCTC            TTTTTTTACGGCGGG 100 80
 IUJ48_04680 1015509 .. 1015554 +  -7.3  -3.01712   TTCGACGATCAGCGG CGCCGTGGTGGCCGGCGGCAC GATG GCGGTGGCGTCGATCACGGCG TCTTCCAGCGGCGCG  54 410
 IUJ48_04700 1019813 .. 1019842 +  -9.2  -3.15544   CTGAGCCGGCGGCCG       GCCGCGCGCGGGC AAACC GTCCGAGC-CGGC       TTGATCCAGGTCAAG  60 37
 IUJ48_04705 NONE
        ccoS 1021065 .. 1021083 +  -3.8  -3.91911   GGCCGCTGCGGGTTC             CCCTGC ACGACCA GTAGGG             TTTGATTCACATCAA  58 67
        ccoN NONE
        ccoO NONE
 IUJ48_04725 NONE
        ccoP NONE
        ccoG NONE
 IUJ48_04740 NONE
 IUJ48_04745 1026885 .. 1026900 + -11.8  -4.14392   GGCCCGCCCCAGGTC              GGCCGC GCGG GCGGCC               TTTTGGGGCTTACGC  85 322
 IUJ48_04755 NONE
 IUJ48_04760 1030068 .. 1030086 + -11.6  -3.97019   ATCGCGCCGCGCGCG             CGGCGGCC TGA GGCGGCCG             TTCTTTACCGTTCAT  81 15
 IUJ48_04765 NONE
 IUJ48_04770 1032439 .. 1032483 +    -7  -3.40403   AGCTGCGTGGTGCGG CGGCGCTGGTCGCCCTGGC GGTACATG GCCGAGACCACC-GCGCCG TTGTCCTGCGCCCAG  58 216
 IUJ48_04785 1036182 .. 1036226 +  -3.9  -3.61652   TTCCTGGAAAAGATT CTGTAGCGGGCGCGCCGCGCC GTT GGCGCCGGGCCCGCATTGCCG TTGGTTATTTGCGCA  53 20
 IUJ48_04790 NONE
 IUJ48_04795 NONE
 IUJ48_04800 NONE
 IUJ48_04805 NONE
 IUJ48_04810 1040453 .. 1040478 +  -6.2  -3.02144   ACCCATGCCGATCTC        GGCGAGGACTGA TGCG TC-GTCC-CGCC         TGTTAAAGCGGGTCG  48 14
 IUJ48_04815 NONE
 IUJ48_04820 1041272 .. 1041301 +  -6.9  -3.14564   GTTCATCCAGTAGTC       GCGGCGCGCCGGC GCAG GCCGGCATGGCGA        TTGCTCACCGCATGG  51 28
 IUJ48_04825 1041707 .. 1041756 + -10.7  -3.21218   GTCGGCTGTAGCCAT GCCGCGCAGCCGGCCGCTGCCGGG AACCG CCCGGCA-TG-CGGGCA-CGCGGC TTGCTGATGGGGCCT  65 101
 IUJ48_04830 1042670 .. 1042691 +  -7.9  -4.37711   CAGGGTCAGTCCGTC           GC-GGGCGGC TTG GGCGCCCAGC           TTTTGGATTTCGTCG  76 277
 IUJ48_04840 1043493 .. 1043520 + -12.6  -3.01712   GAAATGTTACTGTCG        CGCCGGCTCCCG CGGG CCGGATCCGGCG         TGTTGCCAGCCGGCG  68 335
 IUJ48_04850 1044141 .. 1044161 + -18.3  -4.41047   ATGCCGACGCCATCG            CAGCCGCCC CTC GGGCGGCTG            TTTTCATTCCGGCGT 100 67
 IUJ48_04855 1044754 .. 1044766 +  -4.7  -3.53031   TCTGGCCGCCAGCAA                TCGGC CGG GCCGC                TTCATTTCGCGTGCG  53 114
 IUJ48_04860 NONE
 IUJ48_04865 1046421 .. 1046438 +  -2.7  -3.28416   GGACTTGAACCGGGT             TTGTGCCA TAC TGGC-CGA             TTCATGTCAGTCATA  44 79
 IUJ48_04870 1047883 .. 1047919 +  -3.7   -3.6279   ACGCGCAAGCCGTAA   CATG-GGCGTCATGCC TGTCTT GCCGTAACGCCTCATG    TTGTTCGAGACCTTT  53 40
 IUJ48_04875 1048424 .. 1048439 +  -4.6  -3.53012   CTGCCCGGCTGGTGG              GGCACG CGCG CGTTCC               TTTGAGCCGGCGCGC  53 5
 IUJ48_04915 1058286 .. 1058303 +  -2.5  -3.01712   GACGCGGGATACAGT             ACGACGC AAAA GCGGCGG              TCTTGCGACACAGGC  41 63
 IUJ48_04920 1058821 .. 1058848 + -22.8   -4.8048   TAGTTTCAGAAGCAA        CGCCCCGCGATG GCGA CATCGCGGGGCG         TTTTTCATCTGGAAA 100 46
 IUJ48_04940 NONE
 IUJ48_04945 1062963 .. 1062995 +  -2.4  -3.73534   AGGTCGGCGATCTGG      CCGACCGACCCGGC GATCA GTCCGGCCGGCAGG      TTATTGATGACGTTG  53 350
 IUJ48_04970 1069092 .. 1069111 +  -7.8  -3.28497   TTCAGGTCCTGCCCG            GCGCCG GCTTGCCG CGGCGC             TTGAATTTCACCTCG  57 65
 IUJ48_04980 1070607 .. 1070626 +  -2.7  -3.63367   GCCACCCGGGGACGT            CGGTTCG CCGCAA CGGCCCG             GTTTTTCTTGCGCCA  50 65
 IUJ48_04985 NONE
 IUJ48_04990 1072149 .. 1072162 +  -5.2  -4.06295   ACCCGTTATTGGGTG               CGCG TCGTCC CGCG                TTGATTTTTTTCGTC  62 8
 IUJ48_04995 1074732 .. 1074754 +  -4.7  -3.60792   CGCCAGCCGCGCGGC           GCCTGGCCG CTCAC CGGACAGGA           TTTCACCGTTGCCCC  55 54
 IUJ48_05000 1076277 .. 1076325 + -10.2  -3.40403   GTCATAGGTGTGCAG CACCGCGGC-GCCGATCTCG-CGC ACC GCGCCGGTCTCGGCCGCCATGGTG TTGTAGTACGAAAGG  65 140
 IUJ48_05020 1079676 .. 1079696 + -13.9  -4.09685   AGCCGCCAAACGCAA            CCGGCGGCC AGC GGCCGCCGA            TTTTCCCGCATGCCG  93 56
 IUJ48_05030 1081501 .. 1081518 + -11.3  -5.42198   AATTCCTTTACATTA             CAGGCAC TTAG GTGCCTG              TTTTGTTTTTTCGGG 100 44
 IUJ48_05045 1084089 .. 1084100 +  -7.2  -2.57344   GATGTCGCGATACAT                GCGG TCAA CCGC                 CTTCTGCCGGGCGTC  48 384
 IUJ48_05065 1085883 .. 1085921 + -12.2  -3.14132   TGCGGCCTGCGGTGC   CGGACGCTGCTGCGGCGC TGG GCGCTGCGCCGGCGCGCG   TTGCTGGCGCGCCGG  69 98
 IUJ48_05080 1088817 .. 1088829 +  -4.7  -2.87132   GTTGTAACGATGCAG                AGCGG GGC CCGCC                TGTGTGCCGCAACCA  45 487
 IUJ48_05090 1089937 .. 1089965 +  -6.7  -4.18018   AAATCTGTAGCAACC        CTGACCCAATC AAATTAG GGCTGGGTCAG        TTTTCGATGCAAACG  68 384
 IUJ48_05100 1090264 .. 1090280 +  -7.2  -5.44721   CCGCCCGAAAAAAAA              GCGCCG ATGCA TGGCGC              TTTTTTTCGGGTGCT 100 45
 IUJ48_05115 1093918 .. 1093932 +  -3.5  -4.25104   AGTTCCGAAAGGGCG              CGG-GC CTTG GCGCCG               TTTTGATGCGCGGAC  64 46
 IUJ48_05140 NONE
 IUJ48_05145 NONE
 IUJ48_05150 NONE
 IUJ48_05155 1104023 .. 1104055 + -13.3  -2.62184   GCTGGGCGATGGAGT      TGGCCTTGGCCGGCA TCG TGCCGGCCGTGGCGG      TGCTGTCGGGGGACG  67 287
 IUJ48_05225 NONE
 IUJ48_05230 1123177 .. 1123201 +  -4.1  -4.59773   GCGTCCCAGCCAGAT          CACCGTGACGT AGT ACGGCGTGGGG          TTTTTCAGCGTCAGG  72 404
 IUJ48_05255 NONE
 IUJ48_05260 1130615 .. 1130645 +  -6.6  -3.47227   CGACAACTCCAGCAG       CCGCATCTCCGGCG GCG CGACGGTGTTGGGG       TTGTAGTCGTTGGCC  57 372
 IUJ48_05295 1135797 .. 1135828 +  -4.2  -3.16564   GCATGAACCAGGCCT      ACGAGCGCGTCCGAC GAT GACGGGCG-GCGCGG      TTGCTACACTGCCGC  45 6
 IUJ48_05300 1136407 .. 1136423 +  -4.3  -3.57901   GCTCTGGCAATGGGG              CCAGGGC GGC GCTATGG              TGTGTTTTTCCTCCA  53 101
 IUJ48_05305 NONE
 IUJ48_05315 1139177 .. 1139220 +  -2.3  -5.52384   TTCGAGGCGGATTTT CAT-CGCGCCCCCGCG-GACC GGCA GGTCGCGGGCGGGCGCACATC TTTTTTTCATCGGGC 100 47
 IUJ48_05320 NONE
 IUJ48_05325 1140487 .. 1140514 +   -12  -3.03441   CCGCCAGTCGCGGGT        CTTGGCCAGCGT CAGC ACGCTGGCCGAC         TGTTCCAGGATGGTC  66 104
 IUJ48_05345 1143512 .. 1143542 +  -8.1  -2.63596   GCCTGAAGTCACCGC       CGCGCATGGCCCC CCGGC GCGGCCACGCGGG       TCCTCTACAATCCGG  50 35
 IUJ48_05350 1144274 .. 1144295 +  -5.7  -3.89524   CCTGGGGCATCCCGC           CGTGGGGCT TTGG AGCCCCTCA            TTTATGGCATCCCCT  62 88
 IUJ48_05355 NONE
        bamC 1146393 .. 1146407 +  -8.5  -5.38054   TATGGACCCGGAAAA               GGCCC CTTGC GGGCC               TTTTTCTTTGTGCGC 100 72
 IUJ48_05410 NONE
 IUJ48_05415 1155832 .. 1155889 +  -2.6  -4.57569   CGGGCCAGGGACCGA GAAG--GGAGGCTGCGCGATTGCGGACG GCAT TGTCCGTAGTCTCGCGCCCGCCGGCCTC TTTTTCGCGGCGTCG  67 43
 IUJ48_05420 1156620 .. 1156666 + -12.9  -4.34811   AAATCAGAGCCAACT CC-CGAAAGCGCGGCCACGGGCT GAA GGCCCGCGGC-GCGCAGTCGAGG TTTTACCTCTTTCTT  95 344
 IUJ48_05440 1159635 .. 1159654 + -10.6  -4.15044   GCGGCGGCGCGGTTG            GCGGCGCG GGTG CGCGCGGC             TTTCTTGGCGGCGGC  78 63
 IUJ48_05450 1160565 .. 1160592 +  -5.5  -5.02074   CGGCATTCACGCGGC       GG-GC-GCGACGC GTCT GCGGCGCTGCTCC        TTTTTTGAGCGGTCC  87 68
 IUJ48_05465 1163476 .. 1163495 +  -7.8  -3.04461   CGTCGCGGGCCAGGA            TGGCGTCG AGGA TGGCGCCA             TGTTCGGCGTAGGTA  52 177
 IUJ48_05500 1169706 .. 1169726 +  -2.5  -4.33621   TCGGCCGAAGATGAG            TCCCTTC CGTTATC GCAGGGA            TTTCTTCGTTCCATG  65 115
 IUJ48_05505 1170383 .. 1170398 +  -2.4  -3.17075   GGAGCTGGGCTGGAA              GCTGGC CGCG GCCGAC               TTGCGTTGACGCGCG  42 1
 IUJ48_05510 1171809 .. 1171828 +   -15  -5.52384   CCTGGCTGGCAGGAA            GCCCGGGA CCGC TCCCGGGC             TTTTTTTCGTCCCCG 100 53
 IUJ48_05515 NONE
 IUJ48_05520 NONE
 IUJ48_05525 NONE
 IUJ48_05530 1177171 .. 1177188 +  -2.5  -3.57144   AAAGCCTGACATACC             GGACACC CGCC GGCGCCC              TTTCCGCATGACGCA  50 90
 IUJ48_05535 1178122 .. 1178149 + -19.2  -4.72272   GGCCTGCAATGAAAA        GGGCGTCCCGGCC GAT GGC-GGGACGCCC        TTTTTCATGGCGCGG 100 47
 IUJ48_05545 1180143 .. 1180168 + -12.5  -5.40072   CCGGCGGCCGATGAC         GGGGGACGGGC AGAT GCCCGTCCCTA          TTTTTTTGGGCCGCC 100 72
 IUJ48_05555 1181888 .. 1181904 + -10.8  -5.64421   GTTGCCTCCCCAAAA              CCCGCC ACCAC GGCGGG              TTTTTTGTTTGGGGT 100 50
 IUJ48_05560 1183438 .. 1183479 +  -4.9  -2.78384   AGAACGCGGTCGACA GGGCATCGGCCATGGCGGC GTTG GGCGCCATGATCGACACGC  TCTGGTAGCGCGGCC  43 196
         azu 1192953 .. 1192971 + -13.8  -5.86332   CGCGAACGCAAAAAA             GCCGGCGG CCA TCGCCGGC             TTTTTTTTGCGTTCG 100 53
 IUJ48_05605 NONE
 IUJ48_05610 1195625 .. 1195657 + -26.5  -3.75461   TTGGCGGCCAGGCAA      GAGAAAGGGCCGCGT GAT ACGCGGCCCTTTCTC      TTTGGTCGGCATTTC 100 54
 IUJ48_05630 NONE
 IUJ48_05635 NONE
 IUJ48_05640 1201269 .. 1201309 + -11.9  -2.53911   CGCGCGCGCCGGCCT TGGCCGGC-GCCGCG-GCCG CTTC CGGCCCGCGCCCGCCG-CCA TGACTTCCCCGTTCC  64 47
        tilS 1202424 .. 1202443 +  -5.6  -2.57132   CCGCGCGCAGGGAAA            TCCGCGGC TGGC GCCGTCGA             ATTCTGGCCAAAACG  45 58
 IUJ48_05650 NONE
 IUJ48_05655 1204072 .. 1204095 + -16.8  -5.46657   CAGGCTGGTAAGAAA          CCCGCAGAAC GCAA GTTCTGCGGG           TTTTTTCTTGGGCTC 100 60
 IUJ48_05735 NONE
 IUJ48_05740 1221604 .. 1221635 +  -2.9  -3.65827   ATCACCGGGCAGTCC     GACCG-C-GGCCGCC AGAA GCCGGCCTGACGCTC      TTTCGCTCCCCGTTC  51 42
 IUJ48_05745 1225129 .. 1225147 +    -3  -3.25823   GCGCACGGTCGGATC             GTCGCTGC GGT GCAGCCAG             TTGGTCTCCAGGAAC  45 237
 IUJ48_05770 1232994 .. 1233010 +    -5  -3.14132   CCGAGTAGCCGTCGG              CGCCGC GTGAA GCGGGG              TTCATGCGGACGACA  47 33
 IUJ48_05780 1234096 .. 1234121 +    -2  -2.60496   ACCTGCAGTGCGAGC         GTGAAATTAT TCTGAT ATAATTTTGC          CTCTTTGCCGGAGCG  38 93
 IUJ48_05785 1234225 .. 1234250 + -12.7  -5.61881   AAAGTAAAAACGAAA         GGCCTTTGATT TTTT AATCGAAGGCC          TTTTTGTTTTTCCGG 100 40
 IUJ48_05795 1235124 .. 1235147 +   -16   -4.1021   AAAAGCACTGGAAAA          GGCCTGGCGG TCAC TCGCCAGGCC           TTTGTCATTGTGGGC  95 183
 IUJ48_05805 1237368 .. 1237383 +    -6  -3.67417   AGGATGATCTGGCGG              GGCCGC GGGC GGGGCC               TTTCCAATTCGATGT  57 492
 IUJ48_05820 1239106 .. 1239142 +    -8  -3.53012   TCGCATTGGCTGGCG   GCCTCGCGCGCCG-CG AGCCAGG CGTCGGCGGGC-AGGC   TTTCGCCGAACCAGA  58 348
 IUJ48_05830 1240519 .. 1240531 +  -6.9  -3.09289   AGACCTGTTCGCGGC                GCGCG GCC CGTGC                TATGTTCGCGTCCTA  51 40
 IUJ48_05835 1241406 .. 1241422 + -13.7  -2.66316   TCAATTAATGGTTTA              CCGGGCA TTC TGCCCGG              TGCTATGCTGGGCGC  71 100
 IUJ48_05840 NONE
 IUJ48_05845 1243351 .. 1243361 +  -8.2  -3.16202   AGGCGCGCTGAGCAC                 GCCG GCC CGGC                 TCCTTTTAGTGTGAA  57 30
 IUJ48_05850 NONE
 IUJ48_05855 1245105 .. 1245163 +  -4.8  -3.72576   CGCCAGCGGATCGTG GCTGT-CGGCCGCCGCCT-CGACG-C-CGGC CACG GCCGCGTCG-CGCAGGCG-CGGCTGCAC-GC TTTCGTGGCCGACGC  58 114
 IUJ48_05890 NONE
 IUJ48_05895 1254506 .. 1254551 + -20.4  -2.96274   GTGAGCGGGCAGGGG CGGC-GGCGCCCGCCGCCGCGC CCGG GC-CGGCGTCAGGCGCCGGCCG TATCCTTGTGCGGCG 100 37
 IUJ48_05950 1270992 .. 1271042 + -16.9  -3.53012   GTGGTCCGCGGCGAT GGCGCCTGCC-GG-CGCCGCGCGC CGGCCT GAGCGCGGCGTCCCGGCGGG-GCC TTTGCCCACGCGGCA  91 172
 IUJ48_05955 1272200 .. 1272232 +  -8.4  -3.21747   CGCCTAGGGCGTAGA     TCCTGCAGCATCGGC GGTC GCCG-TGCCGCAGCA      TTCCTCCTCCAATCA  59 68
 IUJ48_05960 1273267 .. 1273295 +  -7.2  -3.53811   GTGCAGGTGATCGAG        CGCATGGCGGCG GGCCG CGGCGCCCAGCG        TTTCGCGGACCTGGG  60 164
 IUJ48_06030 1288201 .. 1288223 +  -9.8  -3.38991   GCCCACGCCTTTGGG           GGCGTCGC GACCGCG GCGGCGCC           TATTCTTGGAGAGCT  64 91
 IUJ48_06035 NONE
 IUJ48_06040 NONE
         pgi NONE
        galE 1294828 .. 1294852 + -12.7  -3.05844   TCCCTTCCGTCCGCC          GGCCCGGCCGG CAT CCTGCCGGGGC          TGTTCCAATGAGCGG  72 177
 IUJ48_06055 1295856 .. 1295880 + -12.7  -3.05384   CGCCGCCCGCTTCTC          GCCCGGGCGGC GCT GACGCCCGGGA          TTCGCTACGGGAGCC  72 74
 IUJ48_06060 1296738 .. 1296748 +  -2.4  -4.60924   CTAGAAGGGGACGGG                 GCGG CGG CCGG                 TTTTTGACCGGTTTA  70 37
 IUJ48_06080 1302630 .. 1302641 +  -7.2  -2.52795   TGTTGAACACCGCAT                GCGC CTGC GCGC                 TCCGTTGCGCCAGTT  48 223
 IUJ48_06090 1305673 .. 1305708 +    -8  -2.78596   CCGGGGCGCGGACCC    GGACGCGGACGCCGCC GCGC GGCGGCGCCGGTGGGC     TATCATCGGCCGATA  51 51
 IUJ48_06095 1306846 .. 1306856 +  -6.8   -2.7361   CGCCGGCCCGGCTGT                 GGCA AAC TGCC                 TGCGTTTCTGATTCC  48 90
 IUJ48_06100 1307565 .. 1307580 +  -2.4  -2.72799   TTGGCGCTGGCCGGC              GGGGGG TAAT CCGTCC               TGGTGTGTGTGGAGA  38 41
 IUJ48_06105 NONE
 IUJ48_06110 NONE
 IUJ48_06115 NONE
 IUJ48_06120 1314407 .. 1314420 +  -9.5  -3.14344   GTTGCACATAGCCGG               CCGCC TCCA GGCGG                TTGATCAAGGCGGTG  60 323
 IUJ48_06140 1319791 .. 1319803 +  -9.1  -2.71712   GAACATGCCAGCGCG                CCGGT TGC ACCGG                GTTTAGGGGGCCAGC  56 93
 IUJ48_06145 1320150 .. 1320170 +    -6  -3.41878   TGTTGGCAACACTTC            CCGCGCGG CGATT TCGGGCGG            TTGTGGATTGACGGC  53 130
 IUJ48_06150 NONE
 IUJ48_06155 NONE
 IUJ48_06160 NONE
        cpaB NONE
 IUJ48_06170 NONE
 IUJ48_06175 NONE
 IUJ48_06180 NONE
 IUJ48_06185 NONE
 IUJ48_06190 1328754 .. 1328781 +  -5.4  -3.10715   GCGGCATGGGAAGGG        CGCGTGGCAGCGC GCG GCGC-GCGGGGCG        TTGGATGCTGGTGGC  47 47
 IUJ48_06195 NONE
 IUJ48_06200 NONE
 IUJ48_06205 NONE
 IUJ48_06210 NONE
 IUJ48_06215 1334525 .. 1334542 + -14.1  -5.34381   CTCGCGCGCCAGGAA             GCGGGCC CCAG GGCCCGC              TTTTTCTTTGGCTTT 100 45
 IUJ48_06220 1335094 .. 1335118 + -13.6  -4.75372   ACGGCCAAAAAAAAA         GCGCCAGACCC CGAA GGG-CTGGCGC          TTTTTCGTGCCTGCT 100 68
 IUJ48_06240 1339693 .. 1339730 +    -7  -3.09635   TGATACTCCGCCATG  CCGATGC--GCC-GCCGCA CCA TGCGGCTGGCCTGCGGCGG  TTCGGTGGTGGCGAT  52 466
 IUJ48_06270 1346195 .. 1346211 + -15.1  -4.11664   ATGCATAATGGCTGC              CGCCCGC ATC GCGGGCG              TTTCCTTGTTCTGGA  95 109
 IUJ48_06275 1347298 .. 1347314 + -13.7  -4.87626   GCGCCTTCGGCTTGC              TGCCCCC CGA GGGGGCA              TTTTTCATCTTGAGG 100 97
 IUJ48_06290 NONE
 IUJ48_06295 NONE
 IUJ48_06300 1355175 .. 1355209 + -11.2  -2.80935   GATCGATTCGGCCTC     GCCCGCCGGGCCGACG AAG TGCCAGCTCTGCGGGC     TGTCCTGGGTCGCAT  59 309
 IUJ48_06310 1357127 .. 1357137 +  -2.4  -4.66833   GTTACCCGCGTGACC                 CCCC ATC GGGA                 TTTTTGCGATTCCCA  70 249
 IUJ48_06315 1359794 .. 1359836 +  -9.6  -2.62184   GACATGTTGATCACG CGCCCCTGGCGCTGGCGCAC CAT GTGCGGCGTGGCCAGGTGGG TCATGTAGAACACGC  55 430
 IUJ48_06350 1367039 .. 1367053 +  -5.7  -2.82516   CCATCGTGGTGGACG               GCTTC ACGCA GAAGC               TCTACTGATGGCGGC  47 3
 IUJ48_06355 NONE
 IUJ48_06360 1369237 .. 1369252 + -10.4  -3.14051   CAGCGCTTGCAGCGT              GGTGGG CAAC CCCACC               TGTTCATACCACTGC  60 311
 IUJ48_06375 NONE
 IUJ48_06380 NONE
 IUJ48_06385 NONE
 IUJ48_06390 1375322 .. 1375363 + -18.8  -3.55444   GAGGATGTTGCCGCC GCGTGAGGGCGGGTCGGCCC GCAT GGGCCGGCC-GC-CTCGCGC TTTCAACCGTGCCGG  93 20
 IUJ48_06430 1382013 .. 1382046 +  -5.4  -3.16873   TACCATCCAGGTTAT    C--GACGGCGGCT-GGT CCA ACTGAGCCGCCGTCCCG    CTTTGTTCCCTTTCA  47 4
 IUJ48_06435 1382919 .. 1382932 +  -3.8  -2.78679   AGGCCTGGGTCCGCG               CCGA ATAAAA TCGG                GTTTCACTCCAACGC  43 18
 IUJ48_06440 1384132 .. 1384160 +  -7.3  -3.65046   AGGCCTTGGCCCGGT        CGATCGCCAGGTG CGC CACCTTGCCTTCG        TTCTTGCCGTGCGCC  60 354
 IUJ48_06460 1388848 .. 1388903 +  -3.8  -3.14132   TGCGGAACACGCTTT CGAGGTGGGTGCGCACGGTGCTGGG GCTGATG TCCAGGGC-GCGCGCGGCCTCCTTG TTGCTGGCGCCCAGG  45 142
 IUJ48_06470 1391189 .. 1391216 + -24.2  -3.57144   GCTGTCACGCATGAA        CGCCGCGCGTCC GTCG GGACGCGCGGCG         TTTCAGCATCCGGAG 100 74
 IUJ48_06480 1393094 .. 1393140 +  -5.7  -3.14051   CTGCGCTGAATCCGT GCCGC-TCGAGGCGGGCGTGGCG CGT CGCCGC-CTGGCCTGGCCGTGGC TGTTGATGGCGCTGG  49 32
 IUJ48_06485 NONE
 IUJ48_06490 NONE
 IUJ48_06495 NONE
 IUJ48_06500 1396135 .. 1396146 +  -5.8  -4.54047   GAGGCGGCGCCGTCC                GACC CCTT GGTC                 TTTTCTATCGCGTCC  76 39
 IUJ48_06505 1398339 .. 1398369 + -11.7  -4.60924   TCTGACAGCCATCGC       GCCGGCCGGCCGC ACGTC GTGGCCGGCCATC       TTTTTGGAGACTTTC  93 36
 IUJ48_06510 1398923 .. 1398950 +  -3.4  -4.67607   AGCCCGACCAGGCCG        TGG-CGGCTCC TTGACGC GGATCCGGCCA        TTTATTTATTCAGGG  72 12
 IUJ48_06515 1399175 .. 1399185 +  -2.4  -3.18849   CATCGTCGCGGGAAG                 CGGC GGC GCGG                 TGTTGCTGATATAGC  44 1
 IUJ48_06525 1402610 .. 1402621 +  -7.2  -3.73647   GGTGCGCGCGGCGTT                GGCC TGCA GGCC                 TTCTTCCTCGATGAC  64 442
 IUJ48_06565 1410361 .. 1410377 +  -2.9  -2.66249   CGCGAAGGGCAAACG              CTGTGAA CGA TACGCAG              GTGTTGTTGATCGAG  40 20
 IUJ48_06570 1411664 .. 1411700 +   -15  -3.53012   GGCGCGTTGACCGCC    GGCCGTGGCGCCGGGC CAGCC GTCATGCGCCGCGGCC    TTTCGGCCGGGCCGC  86 31
 IUJ48_06580 NONE
        ligD 1416393 .. 1416411 +  -8.8  -3.04144   CCCGTGGCCTGCATC             AGGACGTC ATA GACGTCCA             TCTTCGAGGTGGCCA  55 423
 IUJ48_06655 NONE
 IUJ48_06660 1442720 .. 1442749 +  -5.6  -3.55444   CCCGAAATGAATGGA       CTGCGGCGGC-CC GCCGA GGAGGCGTCGCGG       TTTCACGCGTGGGAG  55 31
 IUJ48_06665 1443293 .. 1443336 +  -5.7  -2.50816   CGGGCCGGCTGTCGG CGCCGGACCGCGC-CAGGCG GAATG CGCGGGGGGGCGGCACGGCG GTTGCTGAGTAGCGC  45 55
 IUJ48_06675 NONE
 IUJ48_06680 NONE
 IUJ48_06685 1446528 .. 1446567 + -18.1  -3.01712   GCGTTTGTAGTTCTG  GATCGTCTGCTTGAGCA GTTCGG TGTTCGAGCAGACGATC   TGTTCGCCGCCCAGG  82 416
 IUJ48_06695 NONE
 IUJ48_06700 1448949 .. 1448961 +  -3.3  -2.96695   CTGGCGCGACGACGT                CCGTC ATT GAAGG                TCCTTTCATCGACAA  42 16
 IUJ48_06705 1449541 .. 1449557 +    -5  -3.14132   GCAGGCCGGGCGCCG              CCGGCG CGGAA CGCGGG              TTGCTGGCCACGCCC  47 100
 IUJ48_06710 1452479 .. 1452498 +  -2.8  -5.10461   ATATCGATGCATCCA            C-GCGGG GCCCATA CCCGCAG            TTTTTCTTGAATCGC  86 193
 IUJ48_06715 NONE
 IUJ48_06720 NONE
 IUJ48_06725 NONE
 IUJ48_06730 NONE
 IUJ48_06735 NONE
 IUJ48_06740 NONE
 IUJ48_06745 NONE
 IUJ48_06750 NONE
 IUJ48_06755 NONE
 IUJ48_06760 1462698 .. 1462723 +  -6.2  -3.73775   GGCGCCGGCCAGCCG        CGCCATGACGCC CGCC GG-G-CATGGCG         TTTGCTGCCGATGGG  60 45
 IUJ48_06765 1462992 .. 1463007 +  -3.2  -3.10641   AATCGCGGCGGAATC              GGCG CGCGGCAT CGCC               TTGCGTGCTGCCTTC  43 40
 IUJ48_06770 1463822 .. 1463840 +  -3.1  -3.49475   GACGCCTGCCGGTAC            TGCTCGGC CCGC GCC-AGCG             TTCTGTAGAAGTCGG  47 411
 IUJ48_06830 1470687 .. 1470714 +  -7.6  -3.24329   GCTTTCGTACCCCAC        CTTGAACGCGGC GCTG GCCACGTCCAGG         TATTCGTTCAGCATC  53 219
 IUJ48_06840 NONE
 IUJ48_06845 NONE
 IUJ48_06850 NONE
 IUJ48_06855 1476210 .. 1476228 +  -2.2   -3.9712   ATGACCACTCTGCCA             CCGCGCCG TTA CGTCCTGG             TTTGTCCTGACGTGG  58 129
 IUJ48_06865 1478648 .. 1478665 +  -3.3  -3.53012   GGACTGCGTCGCGTA             GC-CGGCC GGG GGGCGCGC             TTTCGCCGGCAAGGC  49 25
        ptsJ 1480096 .. 1480118 + -16.2  -2.56914   TTGTCATTCAATGCT           CGCGCGTCCG TGG CGGCCGCGCG           TCGCTTGGTCGCGTC  77 67
 IUJ48_06875 NONE
 IUJ48_06880 1481525 .. 1481539 +    -7  -3.20382   GGTGCGCTGCGGCGA               CAGGGC CTG GCCCGG               TTCATCGGTGTGCAC  53 373
 IUJ48_06910 NONE
 IUJ48_06915 1488829 .. 1488841 +  -4.8  -3.18681   CGCCCGGCGCGCCGC                CGGT GGACA ACCG                TTCCTGACCTTCGGC  49 6
 IUJ48_06920 1489579 .. 1489591 +  -7.7  -3.17075   AAATCCCAGCAAACA                GCTGA TTG TCAGC                TTACGTTCAGGAAGG  55 68
 IUJ48_06925 1490944 .. 1490991 + -16.3  -3.01791   TCACGCCGCCTGCGC CATGC-CCGCCCACGGCGC-CGCG CCG CGCGTGCGACG-GGGCGGCGCACG TCTTCACCAGGACGT  85 110
 IUJ48_06930 NONE
 IUJ48_06935 1493763 .. 1493795 +  -4.7  -3.67597   AGCCATGCTTTCCTT      TCCCAAGGAAGTGGC ATG GCAAATACCATGGGA      TTGTTCGCTGGCGAG  55 122
 IUJ48_06940 1494722 .. 1494735 +  -2.3  -3.51329   CAACGGTAGTTCAGC               CGCCG TCCA TGGTG                TTCTCGTTCCACATG  47 32
 IUJ48_06945 1495696 .. 1495714 +  -8.8  -2.66435   CCTTCGTGCCGCTGC             GCGATGCC TTC GGCATCGA             TCCTGTACTGACCCT  53 110
 IUJ48_06950 1498365 .. 1498393 + -14.6  -3.54424   GTGTGACGGCAGGCA       TGGCGGCACGGCG CCCC CGCCGTGC-GCCG        TTTCAGAAGCTGGCG  86 35
 IUJ48_06970 1503300 .. 1503315 +  -3.2  -2.72344   CGACACGGGACTGGC              CGCC TCCACGTC GGCG               TCATTGGGGATGAAG  40 324
 IUJ48_07020 1514741 .. 1514757 +  -2.2  -3.73072   CGCGAGGCAGGCCCT              CGCC CCCCGGCAT GGCG              TTTGCTGGACAGGTT  53 59
 IUJ48_07025 1515288 .. 1515330 + -16.9  -2.52464   GCGGCAAGCGGCTCG TCGGTGGCCAGGCTCAGGT TCAAT GCCAGGGCCGGGCCGCCGA TACCTTCCAACGGCG  73 183
 IUJ48_07035 NONE
 IUJ48_07040 1519050 .. 1519085 +    -6  -4.56597   TTTCGATGGATGGAA    TTGGCGGGATGGCAGG CGGC CCTGGCATCCCTACAC     TTTTTCAAGGCGCCG  76 41
 IUJ48_07045 1520147 .. 1520169 + -11.3  -3.27525   TAGCGGCATGGCGAT          TGCGCG-CCC GGGC GGGACGCGCA           TTCCCTTTCAACCCG  68 38
 IUJ48_07060 1522696 .. 1522706 +  -2.4  -4.82901   TCCGAGGTGCCGCCC                 CGGC GCA GCCC                 TTTTTATACCGAGCG  74 253
 IUJ48_07075 NONE
 IUJ48_07080 NONE
 IUJ48_07085 NONE
 IUJ48_07090 NONE
 IUJ48_07095 1527599 .. 1527616 +  -9.8  -2.59447   GTGGGCGGCGGCCTG             GGCGCC GCGTCG GGCGCC              ATCTTCTGGTTCAGG  55 189
 IUJ48_07105 NONE
 IUJ48_07110 NONE
 IUJ48_07115 1530290 .. 1530340 +  -4.1  -4.67755   CTGAGCTGCCACCAA TGTCGGGCCGGGAAGCTG-CATGAA TTA TTTATGACAGGGTTCCGGT-CGGCA TTTTTCCATCCGTCT  75 37
 IUJ48_07120 NONE
 IUJ48_07125 NONE
 IUJ48_07130 NONE
 IUJ48_07135 1545500 .. 1545510 +  -2.4  -5.00616   GCAGAATCGCCCGGT                 CCGC GCC GCCG                 TTTTTTCCCGGCGAA  79 141
 IUJ48_07140 1558346 .. 1558379 + -14.5  -4.37658   CACGGCGCAAAACGC     GTGGCAGGGCCCGGT GAAA ACCGGGCCCTGATTC      TTTTCTGCGCACCTT 100 101
 IUJ48_07145 NONE
 IUJ48_07150 NONE
 IUJ48_07155 NONE
 IUJ48_07160 NONE
 IUJ48_07165 NONE
 IUJ48_07170 NONE
 IUJ48_07175 NONE
 IUJ48_07180 NONE
 IUJ48_07185 NONE
 IUJ48_07190 1568499 .. 1568511 +  -2.6  -2.87132   CTGGGCATAGAATAG                GGCG CATCC CGTC                TCTGTCCGCAGGAGC  40 98
        pdxK 1569399 .. 1569428 +   -12  -3.10255   CGGTGGAAGGCTGAC       GCGGGCGGGCCG TTGTGC CCGCCCGGCCGC        TTCAATACGTCTTGT  69 27
 IUJ48_07230 NONE
 IUJ48_07235 1576951 .. 1576989 +  -7.3  -3.71848   CTGGCGCGCCAGCAT  CTGGCGCAGCGGCAGCAGC GAG GC-GC-GCAGCGCCGCCAG  TTGTTCCTCGCGCAG  64 266
 IUJ48_07260 1580916 .. 1580958 + -15.5  -2.87344   CTCCATGATGACGAA CCACCAGGCGCCGTGGAAG ATCCG CGTCAACGGCGTCTGGCGG TCTATGCCCGCGATG  72 136
 IUJ48_07295 1599309 .. 1599329 +  -3.9   -3.6682   GGCATCCTCAGACCG            ATTTCCACG ACC CGTGGAGGA            TTTGAATGACTACCC  53 93
 IUJ48_07300 NONE
 IUJ48_07305 1601480 .. 1601510 + -13.8  -4.65895   CCGCGGCATGAGCGG       CCCGCCCCGGCGCC GGC GGGGCCGGGGCGTC       TTTTTCCATAAAACG 100 30
 IUJ48_07310 NONE
 IUJ48_07315 NONE
 IUJ48_07320 NONE
 IUJ48_07330 1605998 .. 1606011 +  -3.1  -3.14564   GTGAATGACGCGGAC               GCTAGC GCC GC-AGC               TTCATCGACACGTCG  43 37
 IUJ48_07340 1607051 .. 1607067 +    -5  -2.89564   CGCGCAATGTGAGCG              CAGGCC CCCAC GGCCCG              TATCTCGGATGGGAG  45 29
 IUJ48_07345 1607677 .. 1607689 +  -2.6  -3.53012   TCGCCGGCCGGTTGA                GCCG CTTGC TGGC                TTTCAGGCCCACGCC  47 336
 IUJ48_07355 1608508 .. 1608532 +  -5.6  -3.53012   CCGGCAGCGCGGCGA          TCCCGCCGGG CCGGT TCTGACGGGA          TTTCCAGCCCGAACC  55 6
 IUJ48_07360 1609593 .. 1609608 +  -4.6  -3.15427   TCTTCCAGGGCCAGC              GGCGCG TGCT CGTGTC               TTCCTAGGACCTGTT  47 3
 IUJ48_07365 1610684 .. 1610713 +  -5.7  -3.15544   GGCCGCGTGCATCAC       CTTGC-CGCCTG GACCGGG CAGGCGCGCCAG       TTCCTGCGCGTCGAA  50 427
 IUJ48_07380 NONE
 IUJ48_07390 NONE
 IUJ48_07395 1616005 .. 1616035 +  -2.4  -2.98491   TTGCGCTCGCAGGCG       CGGGGCATGGCATG AAA CATCGCAAGCTTCG       TCTGTCGTGTGAATT  41 11
 IUJ48_07400 1617303 .. 1617326 + -10.3   -3.1855   CATGACGTAGATCCG          TTCGGCGGG CGCTTT CTCGCCGAA           TTGGGTGTTGCGAAA  60 524
 IUJ48_07410 1618984 .. 1619008 +  -3.4  -4.37502   TTCAAGTCGCTCCGT         CGACGGCGAAG AAAG CGGCGCCG-CG          TTTTAATGTGCTGGT  66 131
 IUJ48_07415 NONE
 IUJ48_07420 NONE
 IUJ48_07425 NONE
 IUJ48_07430 NONE
 IUJ48_07435 NONE
 IUJ48_07440 1627193 .. 1627207 +  -5.6  -3.04792   GGTTCGGCCGGTGCT               CCGGCA TCC TTCCGG               TGTTGACGGTGCTCG  49 219
 IUJ48_07445 1628076 .. 1628126 +    -5  -3.06696   CGCGGCGCCGCATGA GCCGCGGCGCCCGCCGCCACGC CCGTGCC GCGGGTCCGCGACCGCATCGGC TATATTGCCAGCGCC  47 26
 IUJ48_07450 1629207 .. 1629234 +  -9.9  -3.40403   CCAGCCCAGGTAGCA        CATCTCCGTCGG GATCA CCG-CGGGGATG        TTCTCCTGCACCACG  65 101
 IUJ48_07465 1632989 .. 1633020 +  -2.8  -5.03145   TTTCGTAGCAAAATG      CGG-CATGGCGGCGC CGC GTCCCGCCTTCACCG      TTTTTTCCAGGATTC  81 33
 IUJ48_07470 NONE
 IUJ48_07475 1634755 .. 1634765 +  -4.6  -3.54424   CCCGGCCTGTGCTCT                 GCCG CAA TGGC                 TTTACGACAGTCCCA  53 65
 IUJ48_07485 1638113 .. 1638136 +  -5.9  -3.01712   GCACGATGTAGCCGG          CGGCGG-GCG CGCAC CGCACCGGCG          TCTTGCCGGCCAGGC  48 487
 IUJ48_07505 1642598 .. 1642639 +  -8.6  -3.96148   CCGCGCCCGCGCCGG GGCGCGGCGGTCAGGCCGGG CCAT CCCGGACCGGC-GTC-CGCC TTTGTCCTGGCGCAA  72 82
 IUJ48_07510 1643178 .. 1643211 + -11.5  -3.28712   GCGCCGGCATGCCGG     GCCGGCGCGCGCCGT CGGC GCGGGGCGCGGCCGC      TTATGCGCCGGCGCC  68 67
 IUJ48_07515 1644182 .. 1644218 + -15.8  -2.70932   CGGTCTTCTGAGCCG   GAAGGCGCGGCGGCGCC AGCC GGCGCCGCCGC-CATCC    TCGTTCGCGGGGCGG  78 30
 IUJ48_07520 NONE
 IUJ48_07525 1646017 .. 1646039 + -11.2  -3.73072   GCGCCGATCACAAGC           GTTGACGGCG CCG CGCCGTCCGC           TTTCCTGAACCGATT  77 21
 IUJ48_07530 1647420 .. 1647439 +  -5.6  -3.65812   GGTTCAACAGGCTGT            CGCGGTCG AACA CGATCTCG             TTGTGTTCCACGCGC  54 181
        ppk2 1650321 .. 1650345 +  -9.9  -2.71144   TGGGGCGGGCGCTGT          AGCCGCGCC GCATGCG GGCGCGGCC          TACTTGCCGCGCATC  56 24
 IUJ48_07570 NONE
 IUJ48_07575 1657909 .. 1657955 + -10.9  -3.07113   GCGTCCAGTCCCAGG ATGGCGCCGGACGGCACCAGG ATCTGGC CCTGGTGGCG-CCG-CGCCAG TTCGATCAGGTCGTC  62 496
 IUJ48_07585 1659086 .. 1659125 +  -6.3  -3.14564   CGACCTCGATCTCGC CGCGCGCCAGCCGCGCCGA CCAC TCGTC-CAGCAGGCGC-CG  TTCCTCCGCCGATAC  50 139
 IUJ48_07610 1665442 .. 1665456 +    -7  -3.06696   ACAAGGCCTTGATGC               CGGCGC GCC GCGCGG               TCTGTTCCCACACCA  52 458
 IUJ48_07635 1670199 .. 1670242 +  -2.3  -4.59773   TGGCAATGCGCCGGT TCGATTTCGGCGCCCGCTCG CGGTA CGATCCGG-GCTGACTTCGA TTTTTCAGGATAACC  70 69
 IUJ48_07640 NONE
 IUJ48_07645 1672436 .. 1672457 +  -2.9  -2.87931   ACTGGAGCTTCCTGG           GCCTGC-GGC GCG GCTAGCAGGG           TGTGTCCACGGTGCG  41 9
 IUJ48_07650 NONE
 IUJ48_07655 1673578 .. 1673596 +  -6.6  -2.91383   TCTGCGTATTGGCGT             TGTCGGCA TAT TGCCGGCC             TGTGTGGATGGCCGT  47 281
 IUJ48_07675 NONE
 IUJ48_07680 1678601 .. 1678618 +  -4.7   -4.1822   ATTCAGCAGGCGCCG             CCCGGCG CCCT TGCCGCG              TTTGTTGGCGTCGAC  66 208
 IUJ48_07725 1688871 .. 1688923 + -15.5  -3.28487   ACGGCCGCCTGACGC GCCTGGCCGTTGCGAAGCGCGCGG AGCCCG CC-CGCGCGTTGCGGCGGCCGCGC TATTGCTTCATGTAG  86 29
 IUJ48_07735 1690062 .. 1690074 +  -3.3  -3.12351   GCCGGGTGTCGAAGG                GGCGT GTG ACGGC                TTCACTGTGAAAAAA  43 54
 IUJ48_07740 NONE
 IUJ48_07745 1691951 .. 1691965 +  -9.2  -4.63218   GCAATCGAGCGGGGT               GGCGGC TAC GCTGCC               TTTTATTGCGGCGCC  88 160
 IUJ48_07805 NONE
 IUJ48_07810 NONE
 IUJ48_07815 1704151 .. 1704175 +   -15  -3.24708   GTTAAGCTGTCCCAT         G-GCCGGCGCG AAGG CGCGCCGGCAC          TATCTTTGCGACGTG  83 55
 IUJ48_07820 1704792 .. 1704822 + -11.1  -4.56597   CGCCTTTCCGTTCCC      GTGGG-CCCGGCCT TGCC GGGCCGCGACCCAC       TTTTTCCGAGAGAAC  91 43
 IUJ48_07825 NONE
 IUJ48_07830 1705674 .. 1705724 + -10.3  -2.87132   TAGCGTCTTGGCACG CCCCG-CGGGCG-CGCGTGGGGCTA CGA TAGACCGGCGCGTCACCGGGCGGGG TATCTGGCCCGGGCG  60 84
 IUJ48_07835 NONE
 IUJ48_07845 NONE
 IUJ48_07850 1709404 .. 1709415 +  -5.8  -3.22298   GCTACGGGGTGCTGC                CCAG CGCG CTGG                 TTCCTGGTCGCTGAA  51 0
 IUJ48_07855 1711781 .. 1711797 +  -5.7  -2.90956   CTTCCGCAATCGCCA              GTGGCGC GCC GGGCCGC              TCTCTAGAATGGTTT  47 136
 IUJ48_07860 1714067 .. 1714085 +  -3.1  -3.73775   TCATCCCCCCGCCAG             TGTTCGA CTGGC TCGATCA             TTTCATGGCGCTCGG  54 110
 IUJ48_07865 1714479 .. 1714506 +  -9.8  -3.53855   AAGCCTATCGCCAAT        GCGCGCCTGTTCG TCA TGATC-GGCGCGC        TGTATTTTTCCCAGG  65 55
 IUJ48_07870 1715687 .. 1715705 +  -3.1  -4.54727   CGGTTCGGGCGGTTG            CGGC-TAC ACTT GTGCGCCG             TTTTGCTTTCAGCCC  69 46
 IUJ48_07875 1717011 .. 1717034 + -10.9  -3.72893   CGCTTGCCGCCCACA          CCGCGCGGC CGCCGC GCCGCGCGC           TTTCGTCACCACGTC  77 52
 IUJ48_07885 1718962 .. 1718972 +  -2.4  -2.93089   GAGCGCCGGGGACAA                 CGCC CAT GCCG                 TCCTTTGCCGTGCTG  41 39
 IUJ48_07890 1719606 .. 1719621 + -10.4  -3.53012   ATGTGGTAGGCGCCG              CCGACC CGCA GGTCGG               TTTCGGCCAGCAGCA  69 329
        clpB 1726967 .. 1726992 + -18.3  -4.64861   CGGCGTGTACAGAAA         GCCCCGCAGGC GATC GCTTGCGGGGC          TTTGTTTTGCCGGGC 100 65
 IUJ48_07950 1732668 .. 1732682 +  -3.4  -2.74144   CCACACACTGAGGAT               TGCCGC CAT GCCGCG               CTTTGACCGTAACCA  40 30
 IUJ48_07955 NONE
 IUJ48_07960 1733995 .. 1734011 + -10.8  -2.78384   CTGGACGAAAAGCTG              CGCGCC TGAGC GGCGCG              TATCGTCGCGGCGGG  59 17
 IUJ48_07970 NONE
 IUJ48_07975 1737663 .. 1737684 +  -9.3  -3.53012   ATAAGGCCGGGAGCC           GGCCGTCTC CGGG GCGGCGGCC            TTTCCGGCCAACCGG  65 37
 IUJ48_07980 NONE
 IUJ48_07985 1738953 .. 1738980 +    -4  -4.18197   CAACGGCCGGGTCAG        GCCCGGCACC GCCGCAAA GGTGGCGCGC         TTTTCGATGAACAAT  63 249
         alr 1743355 .. 1743372 + -14.1  -4.08216   TGTCTACTTGAAGAC             CGGGCGC CCAA GCGCCCG              TTTTCGCCCCAGTAA  93 236
 IUJ48_08010 1744195 .. 1744214 + -16.4   -5.1848   CCTCCGATGGAAAAA            CCGGCGCC CGTG GGCGCCGG             TTTTTTCCGTTGCTT 100 92
        hpaE NONE
        hpaD 1750702 .. 1750723 +  -2.3  -4.67478   AGCTGGGACTCATGG           CGGCTATGTT AGC AAGA-AGCCG           TTCTTTTTCTGTTTG  70 476
        radA 1753250 .. 1753270 +  -3.9  -3.14693   GCTCGACAAGCTGCG            CTGACGGGA GCC TCACGTGAG            TCTGTTGCTGATCGC  45 22
 IUJ48_08060 1754047 .. 1754060 +  -2.3  -3.31263   AAAGCTGAGCGCCGC               TCGCC GGGA GTCGA                TTGTCACGATCCCAT  45 33
 IUJ48_08065 1754559 .. 1754584 + -10.4  -5.08367   ACCTGGAAGTCGAAA         GCCTCTCGGT ATGGGC GCCGGGAGGC          TTTTTCGTTTGTATT 100 105
 IUJ48_08085 1758999 .. 1759009 +  -2.4  -2.83403   TGAGCGCTGCCGATA                 CGCC CCA GGAG                 ATTTCGTGGCCCGAC  40 70
 IUJ48_08090 NONE
 IUJ48_08095 1760956 .. 1760972 +  -2.1  -4.07568   CTGGACTGAATGCGC              CGTCCGG TCG CATGACG              TTTTCCCCGCCGCGC  58 32
 IUJ48_08100 1762079 .. 1762101 + -16.2  -3.37344   ATCGGTATCAACACA           CCCCGCGCGC CGG GCGCCCGGGG           TTCATTCGATGGGAA  88 44
        garL 1762906 .. 1762937 + -17.2  -3.21695   CTGATCCTGCCTGAG      CGCGCGGCCGTCGC GTTC GCCACGGCCGCGCC       TTGCCTTACTGGTCC  91 37
 IUJ48_08115 1765346 .. 1765363 + -11.3  -3.89756   CCAGGCAACAAAAAA             GGATGCC CGTG GGCATCC              TTCTTCATTTGCCGT  79 164
 IUJ48_08155 1774305 .. 1774362 + -16.2  -3.17051   GGTTCCAGCCACATG TCGGCCTG-GCG-CGGCCCCGCGCCGGT CGGC GCCGCCGCGCGGCCGTCGGGCACGCCGA TATTGGTGATCACCG  80 398
 IUJ48_08175 1777844 .. 1777860 +  -9.3  -2.78596   CCCGTTGCCCGGCGA              GCGGCCC TGT GGGCGGC              TCTGCTCGCCACCTC  56 147
 IUJ48_08180 1781094 .. 1781128 + -17.3  -2.83012   GGTCATAAACACATA    CC-TGTTAACCCCGCG TCGC CGCGGGGTTAACGCGG     TATCCTCGTAGAGTT  87 54
        sodB 1781810 .. 1781832 + -20.6  -5.48213   CATCGCCAAGGCCGA           GGCCCCTCGC ATC GCGAGGGGCC           TTTTTGTTTTCCGTG 100 62
 IUJ48_08190 1783789 .. 1783803 +    -7  -3.89346   GGTCGTCGTTCTGAA               GCGCGG ATG CCGCGG               TTTGTGGGCTGGCCG  64 27
 IUJ48_08195 NONE
        pcaF 1786685 .. 1786720 + -23.6  -2.87132   CGCGCCGGGCGGACA    TGCAAAAAAGGGAGCC CGCG GGCTCCCTTTTTTGCA     TGTCTCGCGGCGGCC 100 91
        clpS 1788151 .. 1788170 +   -15  -3.46602   AACTCGCAGGAACAG            CGCCGCCA CGAC TGGCGGCG             TTCTGCTGTACAGGG  86 40
 IUJ48_08220 1793489 .. 1793505 +    -5  -2.70932   GTCGAGATCCGCGAT              CGCAGC GCCAA GCAGCG              TCCTTGAACACCGCC  44 2
        pbpC 1795762 .. 1795787 +  -2.5  -2.90496   AATCGTGTATTTGCC         CGCTTCGATGCG TTA CGGAG-GAAGCG         TGATTTCCCAAGAGC  40 56
        clpA 1798328 .. 1798340 +  -4.8  -4.17048   GGCAGCCGATTACAG                GCCT GTGCG AGGC                TTCTTTTAGGGGGAG  64 257
 IUJ48_08235 1799703 .. 1799714 +  -3.6  -3.61398   CGGCGCGGCGCTGTC                TGCC GCCT GGCG                 TTGTTCAAGAAGAAA  51 44
 IUJ48_08240 NONE
 IUJ48_08245 1802145 .. 1802165 + -14.1  -3.14132   GCCGTGATCTCAAAC            GGTTAACCC CTA GGGTTAACC            TTAATACAAACCAGG  76 68
        putA 1806110 .. 1806127 + -11.3  -3.51633   GTGACCGAGGGGTAA             CCCTTGG GAAA CCAAGGG              TTATCTCCAATATCT  72 43
 IUJ48_08255 1807438 .. 1807467 + -21.5  -2.54098   TAAGCTGCCTGACCC       GGCCAGGACGCGGC GCC GCCGCG-CCTGGCC       ATCTTGATTGACCCC 100 38
 IUJ48_08260 NONE
 IUJ48_08265 NONE
 IUJ48_08270 NONE
 IUJ48_08275 1811160 .. 1811179 + -16.4  -5.93809   TGCCGCATGAGAAAA            GCCCGGCC GCCA GGCCGGGC             TTTTTTTTGTGCCGC 100 53
 IUJ48_08285 1813293 .. 1813308 +  -2.5  -3.91072   ATACGGTGCCGGATG              CACCG ATGTGG TGGTG               TTTGTACCCATTTCG  55 69
 IUJ48_08290 1813674 .. 1813691 + -12.7  -5.60993   GCGCCAGGAGAAAAA             CGCCAGC TTTC GCTGGCG              TTTTTTTATGCCCGA 100 52
 IUJ48_08300 NONE
 IUJ48_08305 1816748 .. 1816771 +   -11  -3.25942   CGGGTGGCCAGCGCG          CGGCGGC-GGT CGG ACCAGCCGCTG          TTGATCTGGAAGCCT  66 300
 IUJ48_08320 NONE
 IUJ48_08325 1820787 .. 1820802 + -10.4  -5.53991   TGGAGATAGGGAAAA              GCAGGC TTCG GCCTGC               TTTTTTTCGTCCATA 100 92
        ehuB 1821815 .. 1821825 +  -2.4  -2.62396   CGCGAACTAGGGGGC                 GCCG ATG CAGC                 TCATATCCGAACATA  38 31
        ehuC NONE
        ehuD NONE
        ehuA 1823972 .. 1823991 + -10.6   -2.8655   GCGTCGGGATTGGCG            GCGCGGGC GGAT GCCGGCGC             TATGCTGTGCATCCG  60 90
 IUJ48_08350 1825171 .. 1825187 + -15.1  -5.40072   TCGCGCAATGAAAAA              CGCCGCG TGA CGCGGCG              TTTTTTTCGGGCGGG 100 53
 IUJ48_08370 1828317 .. 1828336 + -12.1  -5.52986   GGCGCCATCGGGAAG            GCCCGCC CGACAT GGCGGGC             TTTTTTTCGTCCCGT 100 53
 IUJ48_08375 NONE
        pepE NONE
 IUJ48_08385 NONE
 IUJ48_08390 NONE
 IUJ48_08395 1832727 .. 1832746 + -13.6  -5.27938   CGCCGCAAACAAAAA            CGCCAGAC TCGC GTCTGGCG             TTTTTGTTTGGCGGT 100 81
 IUJ48_08420 1839216 .. 1839249 +  -3.5  -3.85817   TGAGCCGACGCCCGC     CGCGCAGCCGGGCCG CCGA CGGCCCTGAATCGCA      TTTATCGGGCGGCAT  56 38
 IUJ48_08425 1841480 .. 1841514 +  -9.9  -2.52464   GGGTCCATCGATGGG    CCCGCC-GG-CGGCGGC ACG GCCGCCTTCCCGGCGGA    TGACTTGCGGAAGCG  55 66
 IUJ48_08435 NONE
 IUJ48_08440 NONE
 IUJ48_08445 1846214 .. 1846243 + -17.9  -5.00616   GCGCAGCGAAAGGTC       CAATGGCCGCGGC TTTC GCCGCGGCCATTC        TTTTTTCCAGCGCCG 100 82
 IUJ48_08515 1865847 .. 1865875 +  -4.8  -4.80396   AATTCCCAGCAAAAA       CAATGACTTAGGAT TTT ATCCT--GTCATTG       TTTTTGGCTGTTTTG  80 43
 IUJ48_08545 NONE
 IUJ48_08550 1873597 .. 1873610 +  -8.1  -3.86995   CCCGGTTGTTGCCGC               CGTCC ACAT GGACG                TTCTTGTCCGTTTCG  67 115
 IUJ48_08590 1877651 .. 1877685 +    -4  -2.80966   GGCGGCGATGCGCAG     GGGGCGGATGCGTGCC GGG GGCGCGCTTGCGCTGA     TCGTATTCATTGGGT  40 446
 IUJ48_08600 1879198 .. 1879216 +  -6.7  -3.56092   GGTGGCCCTTCTACT             CATCGGG CTACT CCTGATG             TTTCCGCCCTGGTAG  59 179
 IUJ48_08610 NONE
 IUJ48_08615 1881826 .. 1881870 + -10.6  -4.08216   CAGTCCTAAGCGCTG GGTGGCTTCGGTAAGCGCTG ACCCG CAGCGCTGGCCGAAACCCGC TTTTCAGCGGAATCG  79 51
 IUJ48_08635 1885401 .. 1885420 +  -7.8  -4.45544   CGAGTTCGAACAAAC            GCTGCTGG GCAT CGAGCAGC             TTTTCGTTCATGGCC  79 372
 IUJ48_08650 NONE
 IUJ48_08655 NONE
 IUJ48_08660 NONE
 IUJ48_08665 1887777 .. 1887803 +  -2.3  -2.84504   TTTTTGTATGGAGAG         TCGCCATGA GCGTGAAAG TCATGGGGA         TGGTGTTTGACCGGT  40 17
 IUJ48_08670 NONE
 IUJ48_08675 1889344 .. 1889363 +  -4.9  -2.87132   TGGGTGCGGGCCTGG            GGGCGCT GGCATG AGCGCGC             TGTCTCGCAACAAGG  45 12
 IUJ48_08680 NONE
 IUJ48_08685 1890437 .. 1890459 +  -9.9  -4.35044   CCGTAGCAAACTAAA          GCCCACATGC TAAC GC-TGTGGGC           TTTCTATTTAAGTCA  83 324
 IUJ48_08705 NONE
 IUJ48_08710 1893677 .. 1893699 + -11.9  -3.14564   GCTCGTAGAAGACAA           CCGCGCGGG AGTTG CCCGCGCGC           TTCGTCGCGGGCTCG  69 42
 IUJ48_08715 NONE
 IUJ48_08720 NONE
 IUJ48_08725 NONE
 IUJ48_08730 NONE
 IUJ48_08735 1899024 .. 1899055 +  -2.8  -4.08216   CCCCGTTCAAGGACC      AAAGTATGGCCCGC TTAG GCGGGCCATCGTCA       TTTTCAGGAGCCTCC  60 56
 IUJ48_08740 NONE
 IUJ48_08745 NONE
 IUJ48_08750 NONE
 IUJ48_08755 NONE
 IUJ48_08760 1902035 .. 1902055 + -15.4   -4.1891   GCCCTCCAACTATCT            GCGCCCGG CCCGA CCGGGCGC            TTTCTATTCCGGAGC  95 57
 IUJ48_08765 NONE
 IUJ48_08770 NONE
 IUJ48_08775 NONE
 IUJ48_08780 NONE
 IUJ48_08790 NONE
 IUJ48_08795 NONE
 IUJ48_08800 NONE
 IUJ48_08805 NONE
 IUJ48_08810 1913571 .. 1913585 +  -8.5  -2.90763   GCGTGCCGGAGTTCG               CCGGC CGCGC GCCGG               TCTATCAACTGTCGG  55 158
 IUJ48_08815 1914479 .. 1914492 +  -9.5  -5.86061   TTAGGTTTTCTCTTA               CCCGC TTCG GCGGG                TTTTTTTTCGTCCAC 100 42
 IUJ48_08820 NONE
 IUJ48_08825 NONE
 IUJ48_08830 1915769 .. 1915805 +  -5.1  -3.14132   GTTGAGTATTGCGAC   CATGCGCGGCCGA-TC TATTTC GACTCGGCTGTGCGGG    TTGATGAGACCCCCC  47 36
 IUJ48_08850 1919432 .. 1919449 + -10.5  -3.60296   CCATGGTTATCGTGC             GCGCCGG CCAT CTGGCGC              TTTGCGCTGGCACTC  71 57
 IUJ48_08860 1920785 .. 1920796 +  -4.4  -3.45832   CGTTTTGCCAGCTCC                CCAA GATC TTGG                 TTGCTTATGACATTC  51 178
 IUJ48_08865 1921581 .. 1921603 + -12.7  -5.14563   CAGTGCGTCTTAAGA          CCCCGC-CGG GAAA CCGAGCGGGG           TTTTTTCATGCCGGG 100 90
 IUJ48_08875 1922635 .. 1922645 +  -8.2  -3.65224   CTGCGGCCATCAGCG                 GCGC GTC GCGC                 TTGTTGAACTAGGCT  65 3
 IUJ48_08880 1923252 .. 1923273 +  -9.4  -5.24129   GAGTTCCACGCACAA           GGCGC-CGC ATACG GCGAGCGCC           TTTTTTCTGCCGGCA 100 92
 IUJ48_08890 1924300 .. 1924311 +  -2.2  -3.33833   ACGGTGGAATTTGAG                CGTC GTGA GATG                 TTACATTTGGTGTTT  45 67
 IUJ48_08895 1925116 .. 1925138 + -16.3  -5.20606   CGTCTGCCAATTCAA           GGCCCGGCA AATCA TGCCGGGCC           TTTTTGTTGGTGTTT 100 63
 IUJ48_08905 1926740 .. 1926759 + -16.4  -3.14564   GCCGGGAGGTGAAAA            CGCCCGCC GGCT GGCGGGCG             TTGATGCCGCCATCG  85 41
 IUJ48_08925 NONE
 IUJ48_08930 NONE
 IUJ48_08935 NONE
 IUJ48_08940 NONE
 IUJ48_08945 1935352 .. 1935366 +  -4.2  -4.18018   TCGTAACGCCCGCGC               CGCG CTACCTT CGCG               TTTTCAATCGCGGAG  62 130
        aqpZ 1936453 .. 1936470 +  -4.7  -3.44622   GATGCCCCGTTCCTC             GTGCAGG CGGT CCAGCGC              TTCCTTCTGCGCGTC  52 378
        kdsA 1939475 .. 1939505 + -11.1  -3.09823   CAAGTTGTTATACGA       TCCGGGCCACC AAACCTGAG GGAGGCCCGGA       TGTCGTTTTACGCGA  66 62
 IUJ48_08970 1940223 .. 1940245 +  -7.6  -2.53876   TTGGCCTAGCGGTGA           CCCGCGCC GCCCGCG GGCGCGGA           TGGATTCGGCTCCGC  50 435
 IUJ48_08990 NONE
 IUJ48_08995 1943323 .. 1943343 +  -4.6  -3.55444   GCGAACGTTCATCCG           GCTCGCGCC GGCA GGCACG-GC            TTTGCAGAGTCCACC  53 113
 IUJ48_09005 NONE
 IUJ48_09010 1946098 .. 1946112 +  -8.5  -2.79796   TCTCGGGGACAGATG               GGCGG CGCGC CCGCC               TATAATGCGCTCGCC  55 71
 IUJ48_09015 1946612 .. 1946626 + -12.8   -3.6608   GCCAGCGGGTATCGC               CGGCGG TCG CCGCCG               TTTCGCTGACCTGCT  74 211
 IUJ48_09025 1947322 .. 1947336 +  -8.6  -3.27475   ACCGGCTGTCAGGAA               GCCTTA GCA TAAGGC               TGTTATAGTCGCGCC  59 19
 IUJ48_09030 1947759 .. 1947802 +  -6.9   -4.0492   GACGGCAAACCAAAG TGCCATCCAAACGGCGTATGT GTGA GCG-ACGCCCTTTG-ATGGCA TTTATATAAGCCTTG  67 45
 IUJ48_09035 1948333 .. 1948346 +  -9.5   -5.1287   TGACTTTTCGGAAAA               GCCCC TTCG GGGGC                TTTTTTGCATCTGGG 100 46
 IUJ48_09040 1949358 .. 1949369 +  -5.8   -4.0098   ATCATCTGGCGCCCC                GCGA GCAA TCGC                 TTCTTTAGGTTCGAG  64 283
 IUJ48_09045 1949641 .. 1949673 + -11.4  -4.72272   GGCGCGCCACAATGA     AAAAAGCCCCG-CAC GCGA GTGTCGGGGCTTTTC      TTTTTGCTGCGGCGC 100 67
 IUJ48_09055 1951307 .. 1951346 + -29.4   -3.6502   TTCCGGGTGGAAAAC  GGGGCGCGAGCATCCGGG CTTA TCCGGGTGCTCGCGCCCC   TTTGCGTCAGGGGTC 100 69
 IUJ48_09060 NONE
        clpP 1953449 .. 1953476 + -13.4  -3.96483   TTTGAGTAAGCGCAG        GCGCCGGGCC CTTTACCC GGTCCGGCGC         TTCTTTACCTGAGAT  89 74
        clpX 1954818 .. 1954834 +    -8  -5.71712   GATATTTCAAAAAAA              CCCGTT TCCGT AACGGG              TTTTTTTGTCTCCGG 100 43
         lon 1957541 .. 1957564 + -15.4  -4.56597   GGGGCGCGTCAAAAA          TAAACCCCGC TTGC GCGGGGTTTA           TTTTTGACGCGGCCG 100 65
        uvrB 1961950 .. 1961968 +  -2.5  -3.66401   CGGCCCTGGGATGAA             GTTAAAT ATAGC GTTTAAC             TATTTGATTTATAGG  50 150
 IUJ48_09095 1962625 .. 1962640 + -11.8  -5.24129   TGGCAGTGAAAAGAA              CCGCGC GACA GCGCGG               TTTTTTCTAGCCGGG 100 84
        iscR NONE
 IUJ48_09105 NONE
        iscU NONE
        iscA NONE
        hscB NONE
        hscA NONE
         fdx NONE
        iscX 1968298 .. 1968313 + -10.4  -4.74103   GAACCTTCAGCGAAA              CGCTCC TTCG GGAGCG               TTTTTGCATTGGGGG  95 39
 IUJ48_09140 1969338 .. 1969350 +  -3.3  -5.55855   ACGAGGGCCGGCGGG                GCCTC GAT GAGGG                TTTTCTTTTTTTGGG 100 85
 IUJ48_09145 1971632 .. 1971671 + -16.4  -4.56597   CTACAAGTTCTGACG  CGGGCGCCGCGCTTTACCG GCC CTG-GAAGCGCGGCGCGCG  TTTTTCGCGGAAGGC 100 28
 IUJ48_09155 1973497 .. 1973512 +  -3.2  -3.44284   GCGGCTGCGCGAGGC              GGCC TGATGGAC GGCC               TGTTCTTCCTGGAGG  49 19
 IUJ48_09160 NONE
 IUJ48_09165 NONE
 IUJ48_09170 NONE
 IUJ48_09175 1977457 .. 1977471 +  -3.5  -2.78384   TCAAGCACTACAAGC              GCC-GC AAGC GCTGGC               TGTCATGAACGGGCC  40 3
 IUJ48_09180 NONE
 IUJ48_09185 NONE
 IUJ48_09190 1981558 .. 1981587 +  -9.1  -3.05596   GCGATCCAGCGCTTC       GGCCAGGCGCAGG CTGT CCAGCGCCTGGAA        TTCGCTGGCGAACTG  55 453
 IUJ48_09205 1985179 .. 1985228 +  -9.1  -3.06501   ATGAACAGCGGCGCG CGGCGCACGGGCGCCGCGGCGCC GTGGTA GCCGCCGCGG-GCGCGA-CGCGG TTGCATCACCATGTA  55 293
 IUJ48_09230 1990355 .. 1990380 + -19.1  -5.12068   GTGGGCAAAAGAAAA         TGGGCGCATCC TCGC GGATGCGCCCA          TTTTTATTCGGTATC 100 62
 IUJ48_09245 NONE
 IUJ48_09250 1995182 .. 1995231 +  -8.4  -2.70932   AGCTGCTGATGGAAA ACG-GCCGGCTGGTCT-CGGGCTG AGGC CTGCCCGCGGGCCGGGCGGCGCGA TGATTGAGCAGGAAA  53 3
 IUJ48_09255 1996433 .. 1996446 +  -3.1  -4.18494   GGGCGAAGCGCAGGG               CGTTGC GCA GCA-CG               TTTTCGATGGCGCTG  61 374
 IUJ48_09270 NONE
 IUJ48_09275 NONE
 IUJ48_09280 NONE
 IUJ48_09285 NONE
 IUJ48_09290 2004262 .. 2004305 + -14.5  -2.57013   TATTACCGCTGAAAG CCGCCAT-GACGCGGGCGCG ATTCG CGCGCCCGCGTCGACTGCGA TGCGTTGCCTTCAAC  74 29
 IUJ48_09300 2009251 .. 2009275 + -13.5  -2.63715   TCCACGCCCTTGCTG          GCGCTCTGGCC GCC GGCCAGGGCGA          TGATCTCCGATGCGT  66 461
 IUJ48_09310 2011184 .. 2011201 + -14.1  -2.64803   TTCCAGATCGCCTAT             CGCCGCG TGGC CGCGGCG              TCAATTTCGAGATCA  70 204
 IUJ48_09325 NONE
 IUJ48_09330 NONE
 IUJ48_09335 2014328 .. 2014345 +  -3.3  -3.72141   CCACCCGTCCCGGTT             CGC-CGCC GCT GGCGTGCA             TTTCGGTGTAGATGT  55 190
 IUJ48_09345 2016014 .. 2016029 +  -2.4  -3.74872   ACGATGCAGTGGCAG              GTCGTG CATG CCCGGC               TTTGCTCGCATGCGT  53 221
 IUJ48_09355 NONE
 IUJ48_09360 2018268 .. 2018295 +    -2  -3.57144   ATTTATTTTTCCCCG        CGGGTTCC CACTCCCGTCCC GGAATCCG         TTTACCCCTGCAAGG  50 61
 IUJ48_09365 NONE
 IUJ48_09370 2022731 .. 2022750 +    -5  -3.28712   GGGGGCCTTGCTGTG            GTTGCGCCT TTG AGGC-CAGC            TTATCGAACGCCGGC  49 13
 IUJ48_09380 2025056 .. 2025078 + -11.9  -2.52464   GGCGGCATGCAGGGC           CGGCGCGGC AAAGC GCCGCGCCA           TGCGTTCGGGCACCA  58 467
 IUJ48_09435 2038899 .. 2038916 + -14.1  -2.87463   CATGGTGGACCCATA             GCGCGCG CCGA CGCGCGC              TGTCTCCCACGCATT  73 25
 IUJ48_09440 2039910 .. 2039920 +  -3.2  -4.66833   GGCTTTTCCGTGGGG                 CTGG CGG TCAG                 TTTTTGAAGTTGGCC  72 8
 IUJ48_09450 2045599 .. 2045633 + -18.4  -2.90496   AGCCCGGATTGTGAA     AACGCCGCGCCACGGC AGT GCCGCGGCGCGGCGCA     TCGTTTACGCCACCG  89 66
 IUJ48_09480 NONE
 IUJ48_09485 NONE
 IUJ48_09490 2051464 .. 2051475 +  -7.2  -3.24924   TTGCTGGCTCGGCGG                CGCG CGGT CGCG                 TGTTGTCCGTCGGAC  54 62
 IUJ48_09495 2052910 .. 2052931 + -10.2  -3.17392   CGATTGGGATGCCGT           GGGGTGAA CACAAT TTCACCCC            TTCAATTCCCGCATC  65 108
 IUJ48_09500 NONE
 IUJ48_09505 NONE
 IUJ48_09520 2055818 .. 2055829 +  -2.2  -2.68003   GGCGGCGCGCAGCGG                CTGT CCTG ACGG                 ATCTTCTTCCCTTTT  38 17
 IUJ48_09525 NONE
 IUJ48_09530 NONE
 IUJ48_09535 NONE
 IUJ48_09540 NONE
 IUJ48_09545 NONE
 IUJ48_09550 2063690 .. 2063733 +  -5.3  -3.92542   CGGCACGGCGGCCGC GCCTCGCGCGGGCACC ACGGCGGGCATCA GG-GCTTGTGCGAGGC TTCTTTCAGCCTGAA  60 43
 IUJ48_09555 2064547 .. 2064560 +  -5.2  -2.52676   CCTTCCTGTGACGCA               GGCC CGTGAC GGCC                TGACTTGGAGACATC  43 30
 IUJ48_09560 2065547 .. 2065585 + -10.2  -2.79492   CAGTGAATGACCGCG   CGTGCCCCTTGCGTCGTC ACC GATGGCGCGATGGCCATG   ATTTCCCGTTCCCAC  60 31
         dld 2067666 .. 2067676 +  -4.6   -3.6715   TTGAGGTTGACGGTG                 GGCG GCG CGTC                 TTTCGGCTTGAATGA  54 378
        trpB NONE
 IUJ48_09590 2072351 .. 2072377 +    -5  -4.15044   CTGGCCCATCCCCGG         CGGGGCGGCG CGTCCTA CGCTGATCCG         TTTCTTGGGAGACGG  64 139
 IUJ48_09595 2075347 .. 2075375 +  -9.6  -3.18728   TCGAATTCACACCAG       GGCGGC-AC-GGTC GAC GGCCAGTCGCCGCC       TTCGATCTTGCCGAT  60 515
 IUJ48_09610 2078891 .. 2078914 +  -8.8  -2.83715   GCGCCGCCACGTAGT          CGAT-GCCGGC GCT GCCGGCCAGCG          TGTAGTGGTCGTACA  53 227
 IUJ48_09625 2082503 .. 2082536 + -18.9   -3.5764   CCTGGCGCCCGGGCG     GCGCCTTCCAGAGGGG TGC CCCC-CGGGAAGGCGC     TTTCCGAGTCCGCTT 100 116
 IUJ48_09635 2084738 .. 2084775 + -14.2  -4.07568   TTCCGATAAGATACC  GGCCATGCGCGGCGCCGC CGTC GCGGCGC-GCGT-TGGTC   TTTTGGAGCACAACG  93 32
 IUJ48_09640 2085853 .. 2085877 +  -9.1  -3.50572   GGGACGCCGCCGCCC          GCGCCGCTACC CAG GGGGGCGGGGC          TTCTCTACAATAGGT  65 152
 IUJ48_09645 2086770 .. 2086790 +    -9  -3.40134   CCGCCGCCCGGCTCC            TGGCATGG CGCGT CCATGCCG            TCTTTGAACTGATTT  60 54
        greB 2087439 .. 2087469 + -26.2  -4.25104   GACCCTCCAAAAGGT       GACGGGCGCCGGCT TGT GGCCGGCGCCCGTC       TTTTGGTGGGCGGGA 100 80
        purL 2095042 .. 2095062 + -16.9   -5.4505   CTGACGCAAAAAGAA            GCTCCACCG AAT CGGTGGAGC            TTTTTTATTCGCGCC 100 122
 IUJ48_09690 2101116 .. 2101162 + -11.4  -2.78463   CTCGCGCGCCAGGAC CACGACGCGCTCGGGGCCGC ACCACAG GCGCCAGCGGGCGGGTCGTG TGTCATGGGCACGAT  59 302
 IUJ48_09705 NONE
 IUJ48_09710 2104618 .. 2104639 + -11.5  -3.78953   TGGCCGGCCCGCGAA           CCAGGCGCG GTGG CGCGCGTGG            TTTACTGATCCAGCT  77 57
 IUJ48_09725 2107640 .. 2107657 +  -8.3  -4.56597   CGCTAGGGTGGAGGG             CGGCGCC AGCC GGCACCG              TTTTTCCGGCGCCGC  84 35
 IUJ48_09730 2109257 .. 2109273 + -15.1  -5.14563   GGCGGAGGAAAGAAA              GCCCGGC CTG GCCGGGC              TTTTTTCATGGCGCC 100 49
 IUJ48_09740 2110660 .. 2110688 + -10.2  -2.61239   CCGCCTGAAGCCGGG       CGCGGCCGGCGGC GAAG GCCGTCTGC-GCG        GTTGTCGCATCTGTC  58 33
 IUJ48_09760 2114550 .. 2114575 + -11.7  -2.96899   AGATACCGTCATTGA         GACCCCCCGCC GTTC GGCGGGCGGCC          TGTGCTTCCTTCCCC  65 67
 IUJ48_09765 NONE
 IUJ48_09770 2117307 .. 2117326 +  -7.8  -3.44051   GGGCGCGCGCGAATT            CCAGCGTG TAGG CGTGCTGG             TTCTGGTAGTCGCGG  58 370
 IUJ48_09790 NONE
 IUJ48_09795 2138388 .. 2138429 +   -10  -3.14931   GGTGAACGCGGCCGT CAGCCGC-GGCGC-GGCCTC GCCC GCGGCCAGCGCCAGCGGCCA TTCCTGCAGCGTACC  60 288
 IUJ48_09805 2140824 .. 2140840 +  -7.9  -3.53012   CGCCACGATCAGCGC              GCCGGGT CGC AGCCGGC              TTTCCAGCAAGGCCA  58 170
 IUJ48_09815 NONE
 IUJ48_09820 2143254 .. 2143312 +  -9.5  -3.14132   ACGACAGCAGCAGCT TGCGCGGCGCGCCGGGCGGC-ATGTGGAC GCG GTACAGATAGCCGTCCT-CGCCCCGCACA TTGGTGCGCACGCGC  60 377
 IUJ48_09855 2150946 .. 2150977 +  -5.8  -3.40403   CCGAGCCGTTTTCGT      TGGTGTGG-CCGCCT TCC AGGCGCACCACGTCG      TTGTCGTCGACCGCG  55 310
 IUJ48_09875 2153773 .. 2153795 + -11.9  -3.61398   CTGAATCGCCACAGG           GCGCTGGCG CGCAC CGCCCGCGC           TTATTGCGGCAGCAG  77 37
 IUJ48_09890 2157223 .. 2157242 +  -4.9  -3.90762   CGAGCGCGGCGCCCG            CCTGGCG GCAACG CGCCAGC             TCTTTTTCCACGCTC  60 342
 IUJ48_09900 2160386 .. 2160396 +  -6.8  -3.72576   GAGCGGAGTTTCCAT                 GGCT GTA AGCC                 TTTCGTCCCGCCGGC  62 166
 IUJ48_09905 2162616 .. 2162626 +  -6.8   -3.5764   CCGCCCCGTCACATA                 TCCG CGG CGGA                 TTTCCCCCTAAAATT  59 92
 IUJ48_09910 2163914 .. 2163940 + -13.7  -2.80056   GAGGGGCGGGATGCC         CGGCGGCCG TTCGCGCGC CGGCCGCCG         CTTTGGATCGATGCT  73 72
 IUJ48_09915 2164831 .. 2164844 +  -9.5  -4.24342   CCGGGCGGTGGAAGG               GCGCG CCGG CGCGC                TTTATTCCTCGCCCC  81 73
 IUJ48_09925 2166621 .. 2166639 +  -4.4  -2.71144   GGGGCAGTTGCAGCG             GCGGCACC TGC GGTTCCGG             TGATTGAGGGAGCTA  42 4
 IUJ48_09930 2167420 .. 2167430 +  -3.2   -4.4648   ACGCAGTGTCCTAAA                 TGGC TCT GCTA                 TTTTGTGATGGCACT  69 97
 IUJ48_09935 2168220 .. 2168231 +  -2.2  -3.01712   TGTCAGTGATCCTGG                CGTG GGCG CATG                 TATTGCGGAACCGGA  41 53
 IUJ48_09940 2168952 .. 2168962 +  -4.6  -3.26722   AGGCCTGGCCCAATC                 GGGG CAA TCCC                 TATTGTGCATATCGG  49 125
        fhuE 2171582 .. 2171592 +  -3.2  -3.76402   GTCCTTGTTGGCCGG                 TGTC CAC GGCA                 TTTCGTAGCTGACCT  55 359
 IUJ48_09970 2175285 .. 2175325 +  -6.6  -4.19817   GCCCAGGACGTGCTG CTGGCCGC-CGGCCGCGCC GCCT GACGCGGCCGCGCTACCGA  TTTTGAGTGAATCCG  68 2
 IUJ48_09975 NONE
 IUJ48_09980 2177673 .. 2177689 +  -3.6  -3.21912   CGTCTGACCTCGGAC              GGACCG CGCCA CGATCC              TTGATCGATTCAACA  45 34
 IUJ48_09985 NONE
 IUJ48_09990 2179292 .. 2179318 + -11.7  -2.71263   CCGGATGCCCTCTCG        TATGCGGCG-CA AATC TGTCGCCGCATA         TCGTTCAAGGGGGTT  62 78
 IUJ48_10005 2182578 .. 2182603 + -12.5  -2.71011   CAAGGCGTTGAGCCA         GCGGGGGTAGG GGCT TCTTCCCCCGC          TGCTTGCGGAGCGGT  65 16
 IUJ48_10020 2185058 .. 2185071 +  -4.5  -4.46854   TCCGCCAGCGGATCG               GCCAG CGCC TTGGC                TTTGTTCTTGCGTAG  72 337
 IUJ48_10055 NONE
 IUJ48_10215 2217338 .. 2217354 +  -9.4  -3.85817   GGCGGCGACCGACGC              GGCGGA GGCTG TCCGCC              TTTGTGAGCCGAAAT  73 172
 IUJ48_10225 NONE
 IUJ48_10230 NONE
 IUJ48_10235 NONE
 IUJ48_10240 NONE
 IUJ48_10245 NONE
 IUJ48_10250 NONE
 IUJ48_10255 NONE
 IUJ48_10260 NONE
 IUJ48_10265 2224244 .. 2224262 +  -2.3  -3.12351   GTTTGGGCCGCTTCG             GCGTCTG GACAA CGGGTGC             TTCGCTATGACGGGA  42 53
 IUJ48_10270 2225108 .. 2225119 +  -4.4  -3.45832   CGTTTTGCCAGCTCC                CCAA GATC TTGG                 TTGCTTATGACATTC  51 53
 IUJ48_10275 2225904 .. 2225926 + -12.7  -5.52384   CAGTGCGCGTAGAAA          CCCCGC-CGG GAGT CCGAGCGGGG           TTTTTTTCATGAGAG 100 90
 IUJ48_10285 NONE
 IUJ48_10290 NONE
 IUJ48_10295 2231100 .. 2231125 + -16.1   -5.0925   TACGGGCAACCACTG         GCCCCCGCCGA GAAA TCGTCGGGGGC          TTTTTCGTTTTCAAC 100 70
 IUJ48_10300 NONE
 IUJ48_10305 NONE
 IUJ48_10310 2234064 .. 2234097 +  -7.9  -4.67234   CCGCATTGCGCGGCA     TTCGGGGCTGGGCGG GAAA CCGCCTGGCCCCACC      TTTTTGGAGTTCCCT  85 61
 IUJ48_10315 NONE
 IUJ48_10320 NONE
 IUJ48_10325 NONE
 IUJ48_10330 NONE
 IUJ48_10335 2236731 .. 2236744 +  -3.1  -3.44146   TATGCCGACGACTAC               GTCGGC GAC GCC-AC               TTCCTTCTGAAAGGA  49 2
 IUJ48_10340 NONE
 IUJ48_10345 NONE
 IUJ48_10350 NONE
 IUJ48_10355 NONE
 IUJ48_10360 NONE
 IUJ48_10365 NONE
 IUJ48_10370 NONE
 IUJ48_10375 NONE
 IUJ48_10380 NONE
 IUJ48_10385 2243671 .. 2243690 + -12.1  -5.40072   CACCAAGACCACGAA            GGCGCGC CGATGA GCGCGCC             TTTTTTTGACCAGGC 100 13
 IUJ48_10390 NONE
 IUJ48_10395 NONE
 IUJ48_10400 NONE
 IUJ48_10405 2256646 .. 2256663 + -14.1  -5.26119   CCTGATCCAACCACG             GCGCGCC CTCA GGCGCGC              TTTTCTTTTTCGAGG 100 50
 IUJ48_10410 NONE
 IUJ48_10415 2258128 .. 2258141 +  -3.7  -3.74872   ACACAAAATTGATTT               CAGGG CCAT CCCCG                TTTGGTAGGGTGGGT  56 503
 IUJ48_10435 2260667 .. 2260709 +  -9.8  -3.15544   GGGAGGCAGTGCCAC CGGC-CGGCGGTCGTGGAGG TCGAT CATCC-CGCCCGCCGCGTCG TTGGTGACGATAGCA  60 201
 IUJ48_10445 2263375 .. 2263409 +  -5.1  -2.81966   TGAGTATGCTGGATG     GCGCATTTTGCTGAT GTTTG ATCAATGAAATGTGC     TGTGCTGAGATTTGC  45 519
 IUJ48_10450 2264641 .. 2264658 +  -9.1  -4.15222   CCATTCGCCGCAGCG             GTCGGCG AAGG CGCTGAC              TTTCTTCACCCGGAT  75 155
 IUJ48_10470 2268632 .. 2268681 +   -10  -3.01712   CCACCGGGGCGGCGG CGTCGCCGGC-A-GGCC-GGCGGGC CAG GTCCACCAGGCCGTTGCTGGTGGCG TCTTCCCAGGCAGAC  59 108
 IUJ48_10490 NONE
 IUJ48_10495 2270480 .. 2270492 + -10.5  -3.36273   TCGCGTTCAACGCCG                CCGGC GTG GCCGG                TTCGTGTTCGAACAC  63 285
 IUJ48_10510 2273551 .. 2273585 + -10.7  -2.71144   CCGGCACCCTGAAGG    GGGCGACA-GCCGGGC GCGC GCCTGGCATGTCGTCG     TCGTTCAACGCGATG  59 29
        guaB 2278719 .. 2278765 + -16.6  -4.86731   ACAATGTCATGCATC ACGCACCGGCAGAACCGC AAAATCAGTCA GCGGGTCTGCCGGTGCGG TTTTATTTACAGCGA 100 58
        guaA 2280448 .. 2280465 + -10.5  -6.28967   ATGAAATGCCGCTAA             GCCCGCG TAAT TGCGGGC              TTTTTTTTGTTTGTG 100 74
 IUJ48_10545 2282019 .. 2282035 +  -8.1  -3.57615   CGCGCAGCTACTCGA              TGAATAG CAA CTATTCA              TTTGAGAGGTATTGA  63 138
 IUJ48_10550 2282256 .. 2282275 +   -10   -3.5518   ATCAAGCTGCGCGAC            CTGGCCCT ATAG AGGGCTAG             TTATATGGCTCTTGA  69 6
 IUJ48_10555 NONE
 IUJ48_10560 2284158 .. 2284178 + -11.1  -3.53012   CCTGGCGGGCTTTAT            CAATCGGCC ATA GGCCGATGG            TTTAACGCCAAGAAG  72 208
 IUJ48_10565 2285300 .. 2285314 +  -4.2  -4.25104   AGCACAACGCTTGGT               CAAGGC AAT GCCTTC               TTTTCATCGACGGAG  66 129
        trbJ NONE
        trbK NONE
        trbL NONE
 IUJ48_10585 2288059 .. 2288088 + -10.6  -3.64822   GCTGTACCTGTAGGC       GCACCGGGCTGG CCACAA CCAGCCCGGCAC        TTTCAATCAACACCT  71 28
 IUJ48_10590 2288354 .. 2288376 + -13.4  -4.74706   AGCTAATGACGAAAG           GGCGGCCACT CGA ACTGGCCGCC           TTTTTCAATCTTCAC 100 35
 IUJ48_10620 NONE
 IUJ48_10625 2292463 .. 2292479 +  -3.7  -3.98256   AAGCCGTGTTCAACC              TCATGAT CTG GTCATGG              TATTTTTCATGGCAC  60 20
 IUJ48_10630 NONE
 IUJ48_10635 2294557 .. 2294580 +  -9.5  -3.56092   GAAAGACACGGCCAG          CCGCCATGC CGACGC GCAAGGCGG           TTTCCGCCGTCATCG  68 128
 IUJ48_10650 2297422 .. 2297453 + -14.6  -2.74012   CAACGGTCTGACAGT      GTGGATTGGTTGTC ACTT GACAACCAATCCAA       TCATTCCCATACTGG  75 30
 IUJ48_10655 NONE
 IUJ48_10660 2298312 .. 2298330 + -13.1   -4.7497   CATCCTTCGCTCGAA             CCCGCCC GAACG GGGCGGG             TTTTTCGTAGGTGGA 100 57
 IUJ48_10670 NONE
 IUJ48_10675 2300502 .. 2300520 +  -8.1  -3.64703   GAACCCGGTGAGCTA            CGCCCGCG ACGC CGCG-GCG             TTTGCATGGCGGCGC  63 296
 IUJ48_10685 NONE
 IUJ48_10690 2303432 .. 2303453 + -10.9  -3.56092   CTATAGTTATCCACA           GCTGGTTTC TAAT GGAACCAGC            TTTAGCCCCTGGTCA  74 35
 IUJ48_10730 2310842 .. 2310871 + -17.1  -3.08464   AGCCTGAATCCCCAC       GCGGCAGGGGCAG GCAG CAGCCCTTGCCGC        TTCCCTCGCTGCTGC  85 34
 IUJ48_10735 2312983 .. 2313006 + -16.7  -3.05384   TCGCGCCCAAGGCAA          GCGCCCCGG CCTCGA CCGGGGCGC           TTCGCTGAAAGGAAA  85 42
 IUJ48_10740 2313289 .. 2313314 + -23.3  -3.01712   CGGTGAAATGCACAA         CCGGGCGCGGC GGTG GCCGCGCCCGG          TGTTCAAGGCCAACA 100 76
 IUJ48_10745 2314582 .. 2314607 +   -19  -2.83715   GGACTGACCGCCGCA         GCGCCCCGCC CATCGC GGCGGGGCGC          TGTGCTGCTGATCGC  93 34
 IUJ48_10755 2315667 .. 2315707 +  -5.4  -3.53811   TGCGGCAGGCTGGCT GGCTGG-TA-CGGTGCCC CACGAGT GGGCGCCGCTGCCCCGCC TTTGAGACGACTACC  53 156
 IUJ48_10760 2316655 .. 2316681 +  -6.4  -3.53811   TCTTGAGACTGCCTC         CATCCGGTCGCG CTG TGTGGCCGGGCG         TTTCCAAACGATGGA  57 57
 IUJ48_10765 NONE
 IUJ48_10770 NONE
 IUJ48_10775 NONE
 IUJ48_10780 NONE
 IUJ48_10785 NONE
 IUJ48_10790 2320534 .. 2320586 + -14.9  -2.70932   GGCACGGAGCGGCTT CGCCGCCGTGCC-GCGTATGGCGCG AGGCC CGCGCCA-ATGCAGGCATGTCCGCG TGCTTCGCACGACAG  75 376
 IUJ48_10795 2322924 .. 2322940 +  -4.4  -3.21416   GCCTTCACTTTCCCC             GAGC-GG CAAG CCAGCTC              TTCATCATGGCGATC  47 320
 IUJ48_10845 NONE
 IUJ48_10850 2335404 .. 2335420 +  -6.5  -3.33492   TGGCCATGTCCAGCA              GCACCTG GCT CACGTGC              TTGTCCGCTACCTCA  52 111
 IUJ48_10860 NONE
        cueR NONE
         fdx 2339307 .. 2339338 + -12.9  -3.25823   CACTAGGACCCAGCG      TGCCGCCGCGGGC GCGCCG GCCTGCGGCGGGG       TTGCTCTGGCAGACG  74 35
 IUJ48_10905 2346982 .. 2346994 +  -3.3  -2.81725   GGCCTAACAAAACCC                TGGAG AAC CACCA                TGCTTAATCTGAGCT  41 6
 IUJ48_10910 NONE
 IUJ48_10915 NONE
 IUJ48_10920 2350497 .. 2350514 +  -8.4  -3.61517   GTTGAAAATGAAGAA             GCCGCT CATGAC AGCGGC              TTCTTCAAGGAGCCT  65 279
 IUJ48_10945 2358253 .. 2358303 +  -5.9  -3.80573   GTCGTAATAGGGGGC GGTC-GCGCGTGGTCTCCTGCGCG TCGG CGCGCCGGGAGCAGTCCGCAGACC TTTGATGATCCTCAG  60 144
 IUJ48_10980 2364429 .. 2364452 +  -7.3  -2.57423   TTTTTGCCGTACACA          GGCCGCGCG CCGAGC CGTTCGGCC           TGCCTTCATCGATGT  50 45
 IUJ48_10985 2365340 .. 2365361 + -10.1  -2.73159   GGGCAACCGGGTTGC           GCCACGGCA TCCC TGCCGTGAC            ATTTGGCGGCCTTGC  59 5
 IUJ48_11000 NONE
 IUJ48_11005 NONE
 IUJ48_11010 NONE
 IUJ48_11015 NONE
 IUJ48_11020 NONE
 IUJ48_11025 2372011 .. 2372031 + -10.3  -3.61398   GCCCTGGCTGGCCAG            CGCGGCGCG GAT TGCGCCGCC            TTGTTCGCCCACCAG  67 420
 IUJ48_11035 2373606 .. 2373629 +  -9.4  -2.71712   ACCCCGCGTCAAGGG          CGCGGCGGCG TCAT CGCCGGCTCG           ATTTGGGGCCCGCGC  56 40
 IUJ48_11045 2375350 .. 2375390 +    -6  -3.05384   CGCCAGCGGCCGAAG CTCATGCCGGT-CTGCTGC ATCA GCAGCCGTGCCAGCGTGCG  TTCGCTCAGGCCGAC  48 258
 IUJ48_11055 NONE
 IUJ48_11060 NONE
 IUJ48_11065 2378280 .. 2378298 + -11.6  -4.85195   GCAGGGCGGGCGGGG             GCGCCGTG GGC CCCGGCGC             TTTTTCACTTGTTTT 100 49
 IUJ48_11070 2380110 .. 2380131 + -10.1  -3.53012   TGCCTACATCTTCGA           TCGTCCCGA CGCC TCGGGCCGA            TTTGCGGGCAAGCCG  69 402
 IUJ48_11075 2381012 .. 2381041 + -13.5  -2.56164   AGGCGCGGCCCGGAC       CGTATCGCGGCGG TCGC CCGCCGCGATCCC        ATTGATCGTTACCGA  67 66
 IUJ48_11080 2381784 .. 2381823 + -10.6  -3.53091   CGCGCAATGCCATGG  CCGGCGATGGCCCATTGG CGCG CCAGCGCGCCGTCGTTGG   TTTCCCACGCGCGCT  65 329
 IUJ48_11090 2383937 .. 2383971 +  -3.4  -4.07568   TGTTGACGGGGAAAT     GGTCGGAGGTGACGGC GTA GCTGTGGAATTCGACC     TTTTCCGAAAAGCGG  60 129
        argH NONE
 IUJ48_11105 2387843 .. 2387857 +  -9.2   -3.1505   GATCTTGGCGTGGGT               GGCGGC CTC GTCGCC               TTCGTAGGCGGTGCT  56 464
 IUJ48_11115 2389414 .. 2389446 +  -5.5  -2.75382   AGCCAGCGTTTTTTT      GGGGTTCCTGAGCGT GTC ATGCTGACGAACACC      TGGTTGCGTGCCCTC  46 88
        ftrA 2391216 .. 2391228 +  -4.8  -2.52464   CGGCACCTCGACCGG                CAGC GCGAA GCTG                TGCATTCCGGCCCGC  42 273
 IUJ48_11135 2393874 .. 2393884 +  -6.8  -3.68827   CGCGCTGCGCACATC                 CGGA ATA TCCG                 TTTCCATGATGAATG  61 305
 IUJ48_11145 NONE
 IUJ48_11150 NONE
 IUJ48_11155 2398487 .. 2398508 +   -13  -5.06414   CTGCGCGGTCCCGGA           TCCGCCCG CTTTGC CGGGCGGA            TTTTTCTTGGGGGGC 100 64
 IUJ48_11175 2401343 .. 2401356 +  -3.7  -3.55444   TACCCTGAACCTTAC               TCCCG ATCG CGGGC                TTTCCGCGCTAGAGC  51 390
 IUJ48_11190 2402678 .. 2402693 +  -3.2  -3.58726   GGCCTGCTATGATTA              CTGGAT AAAT AGCCAG               TTGTCTCTCCGGCCG  51 61
 IUJ48_11195 NONE
 IUJ48_11200 2406802 .. 2406846 + -11.2  -3.53012   TGCGCTTGGCCATTT CACCGGCGGCGTCGGCCAGC GCGCG GTTGGGCAGCGCCGCCAGGG TTTCACCCCACAGCG  69 187
 IUJ48_11215 2409869 .. 2409881 +  -6.2  -3.05384   GGCAATTCCCGCGCC                CGGC GCGGG GCCG                TTCAATGGCGCGGGC  49 55
 IUJ48_11220 2411713 .. 2411743 +  -4.5  -4.11216   CTCCGATTCGACCCG      CGCGGACGCCGCCG CCCG CGACG-CGACCGCC       TTTTCCCCGTCCACC  62 153
 IUJ48_11225 2412320 .. 2412335 +  -6.1  -2.66435   GCCCCCGCGCGCGGC              CGCCA CGGCAT TGGCG               TAGTATCGTCGGCCT  46 101
 IUJ48_11230 2413956 .. 2413969 +  -5.9  -4.67353   AGCGCGGCGGGAATA               CGGGG TTTC CCCTG                TTTTTCCGTAGCTGA  79 131
 IUJ48_11235 NONE
 IUJ48_11240 2416513 .. 2416526 +  -9.5  -3.01712   GGCGATGGCGGCGCT               GGCGC GCGA GCGCC                TCTTCGCGCCGGGCG  59 273
 IUJ48_11250 NONE
 IUJ48_11255 NONE
 IUJ48_11260 2421520 .. 2421532 +  -5.5  -4.18018   ACAGGATCGCACCCC                GCTTG ATC CAGGC                TTTTGCCTGAGGCGG  66 3
 IUJ48_11265 2423061 .. 2423088 +  -4.8  -2.70932   CAGGATGCCCCAGCC        GCCGTAC-GGC GAAGCCG GCCAGAACGGC        TGGTTCCAGGCCAGG  43 464
 IUJ48_11295 2429439 .. 2429452 +  -9.5  -3.21099   GACGCGGACTCGCCG               GCGCC CATG GGCGC                TTCGTCCTGGCGCGG  60 219
 IUJ48_11320 2435682 .. 2435708 +  -7.2  -3.33815   CGAACCGAAGGCCAA        G-GCGGCGGCC TGACGC GCCCGCCGCGC         TTCATTCACCGGACT  55 13
 IUJ48_11325 NONE
 IUJ48_11330 2439244 .. 2439255 +  -7.2  -3.25823   TCGGCACCCGCCTGG                CGCC GAGG GGCG                 TTGCTGTACCCCCGC  54 121
 IUJ48_11335 2440935 .. 2440977 + -14.1  -2.71364   GTTGATGACCACCTT GCG-GCGGTCGTGCGGGTCG TGGT CGACCCGCACCAGCTCGCGC TGCTTGAGCCGGTCG  67 287
 IUJ48_11350 2444354 .. 2444387 +  -4.6  -3.53343   ACCGTGAGGATGGTG    GCCTTGG-C-GCCCAG CGAC CTGGCCAGATCAAGGC     TTTCGACCAGGGCTT  52 452
 IUJ48_11365 2446724 .. 2446739 + -10.4   -3.4072   TTCCTTGACGTAGGT              GGCCTG GGCC CAGGCC               TTGTAGTCGGCGCTG  65 138
 IUJ48_11400 2456790 .. 2456816 +    -8   -3.6579   GGCGGCGTTGACCGC        CGCCTGATCCC CACGCC GGGG-CAGGCG         TTGTTCCGATCCATT  63 238
 IUJ48_11405 2458174 .. 2458190 +    -5  -3.18912   TGCGACACACGGAGG              GCGCCG GCATG CTGCGC              TTGCTGCCTCGCTGG  49 44
 IUJ48_11410 2458748 .. 2458764 +    -5  -2.85999   GTTCGCCGATTGACA              GGCGCC ACGCC GGGGCC              TCTGGTATAAGGTCG  45 28
 IUJ48_11415 2459821 .. 2459833 +  -6.2  -3.14931   GCCGCTCGCGCAGTT                GCGC CATGC GCGC                TTCGTCGGCCGTCAG  50 263
 IUJ48_11430 NONE
 IUJ48_11435 2464046 .. 2464069 +  -9.4  -2.79183   CGGGTTCCGGGGACG          CCCGCCGCCC TTTC GGGCGGCCCG           TATCATGCGCATCAC  58 161
 IUJ48_11440 2465041 .. 2465094 + -10.7  -2.71364   CATTGGTCGACTCCG GCGCGGCGGCGCGCCTCGGCCGGAT ACAG GTCCGGATTGCGCGCGCCACCGTAC TGGTTGGCAAGGTAG  59 437
        tssA 2470844 .. 2470883 +  -7.8  -3.86015   CCACCGGCTGGTCCG GGCCCG-CGCCCAG-CGT CTCGAA ACGTCCGGGCGGCAGGCC  TTTGTCCACCAGATA  67 195
 IUJ48_11505 2479775 .. 2479785 +  -3.2  -4.08767   CGAGCCGTGAGCGCG                 CCTG ACC TAGG                 TTTTCCCGCAATGGA  60 31
 IUJ48_11510 NONE
 IUJ48_11515 NONE
 IUJ48_11520 NONE
 IUJ48_11525 2486970 .. 2486986 +    -5  -3.44051   CGACCTCGACGCCCG              GCGGCG GGCTG CGGCGC              TTGTACTCGTAGGCC  52 273
 IUJ48_11555 2496344 .. 2496378 +  -9.1  -3.18383   CCTCAAACCCTGATC    GGCCCGCCGGACCCGG CTGG CCGGGACCG-CTCGCC     TTCGTCAATACGCAT  62 28
        tssB NONE
        tssC NONE
 IUJ48_11570 2498986 .. 2499009 + -17.4  -4.25104   GCGGCAAGGCGAAGG          CCGCGGCTCG TCCC CGGGCCGCGG           TTTTCCTGAAAGAGG 100 51
        tssE NONE
        tssF NONE
        tssG NONE
        tssH 2505172 .. 2505202 +  -3.8  -2.77522   TTCGCTACCGCCTGA       CCTGAGCCAGGAGC CGC GATCATGCCCCAGG       ATTCTTCCGGACTGT  42 21
 IUJ48_11595 2507862 .. 2507877 +  -2.4  -4.41348   GGTCAACAGCGCCGC              GGCGGG AGGG TCGGCC               TTTGTTTGACGGCGA  65 1
 IUJ48_11600 NONE
 IUJ48_11605 2512047 .. 2512081 +  -3.5  -3.21395   AAAAAGAGATCTGGA    GGCATTGCCGGAGCGC AGCG GCGCTTGGG-GATGGC     TGTTGTCGGAACGGT  45 53
 IUJ48_11610 2513075 .. 2513093 +    -3  -3.05384   TTGACGGACGTCGGT             TCCACGCC GGC GGCATGCA             TTCGATGAGCGGAGC  43 48
 IUJ48_11615 2513326 .. 2513366 +    -4  -3.61398   CCAGAGGCAGGGCGG GCATCACCATGGTCCCG GAGAAGAG CGGGGC-ATGGGGATGG  TTGTTGCCCGCGGGC  53 47
 IUJ48_11620 NONE
 IUJ48_11625 2515931 .. 2515978 + -13.2  -3.19522   CGCGCGCGCCTTTCC TGGCGGGCGCGCGCGACGTCTCC TTG GCCGGCGGCGCG-GCGGCCGCCG TTACCTGTTCCATCC  72 171
 IUJ48_11660 2526560 .. 2526575 +  -4.6  -3.72576   CGGTCACCACGTCGT              GCGGCA AGGA TCCCGC               TTTCCTGAACGACGA  58 99
 IUJ48_11665 NONE
 IUJ48_11670 2532080 .. 2532098 +  -3.1  -2.90496   ATTATGGTTTTGTCT            TCCCGATG ATTG CG-CGGGA             TAGTTTAGAAGGAAG  41 4
 IUJ48_11675 2532917 .. 2532930 +  -3.7  -3.82191   AGCATGCCCGGTCTG               CGGGC AGGG GCGCG                TTCTTGTCGCCTTAG  58 308
 IUJ48_11680 2534080 .. 2534092 +  -7.7  -3.16881   CAAGGGCTCGTGAGC                GGATC ACG GATCC                TTGGTGGCCTGGGTC  55 28
 IUJ48_11685 2535392 .. 2535408 + -13.7  -3.02511   TTCGATCTGAGGCTG              TGCGCGG ACG CCGCGCA              TCTTGCGCCCATCCC  75 31
 IUJ48_11695 2538549 .. 2538561 +  -6.2  -3.03159   CTTGCCGAAGGCCAG                CGCC AGCTG GGCG                TGTTCGGCCAGTTCG  48 290
 IUJ48_11715 NONE
 IUJ48_11720 2541902 .. 2541957 +  -5.9  -4.07568   CGGCCACGCCGTAGC GGTCCTGCACCAGGGC-CTGCCGCGC GTGCA GCGCGGCGGCGACGTAGTCCAGGCGC TTTTCCAGGCGACCC  66 247
 IUJ48_11730 NONE
 IUJ48_11735 2543837 .. 2543869 +  -9.8  -2.86475   CGCCGCTGAGCGGCG     GCGGGGGCGGACAGG TTGG CCTG-CCGGCCTTGC      TCTCGTGTAGCCTTG  58 32
 IUJ48_11740 NONE
 IUJ48_11750 2547070 .. 2547097 +  -3.4  -2.88544   GCGGGCGGCCTATCA        TGGAGGCTCGCAT CCC GTG-GAGTCCCCA        TGTCTACGCCTGCCC  41 72
 IUJ48_11755 2548218 .. 2548243 +  -9.6  -2.57931   CGTCGTGTCGTATCG         ATCGGGCCCC AGGACG GGGGCCCGGC          ATTCTAGACCGTGGC  55 478
 IUJ48_11820 2558194 .. 2558220 + -12.3  -3.15544   AATCGCCGCGATCGG        GCGCCGC-GTTC ATTC GGACTGCGGCGC         TTGCTCCGCATAACG  69 161
 IUJ48_11830 2559398 .. 2559449 +  -8.1  -3.34902   ACGGCCCGGGAGTGA GCCC-GCGC-G-GGCCGGCATCCGGC GATCA GCCG--TGCCGGGCACGGCGCCGGGC TGTTCTATGATGACG  58 26
 IUJ48_11835 NONE
 IUJ48_11840 2560408 .. 2560429 + -17.3  -2.62184   CGGCGCCAATTGCCA           CGAGCGCCC CGCG GGGCGCTCG            TCGTGTCCGGGCAAG  83 93
 IUJ48_11855 2562359 .. 2562388 +  -9.2  -3.01712   CCGGCCGCGTCGCTT       GACGCCGTGGCCG GCCCG TGGCC-CGGCGCC       TATTCCACCCGCGCG  59 81
 IUJ48_11865 2564614 .. 2564632 + -10.3  -4.08216   GCATGGCGGTCGGTG             TCCCTGC CCGGC GCAGGGA             TTTTCAGCGGCCTGC  79 52
 IUJ48_11870 2565753 .. 2565786 +   -13  -2.52543   TCTGACGGCAGGCAG     GGGGCGGCGCGCGG CGCCGC CCGCGCGCCGGCTA      TGCCTTGCGCAGGGT  67 36
 IUJ48_11885 2570352 .. 2570389 +  -4.7  -3.59979   CCGACCAGCCACGCC   ACGC-GTTGCGGCGCCAG GCC CTGGTCCAGCAGCAGCGG   TTTCAGGTAGAACCA  54 494
 IUJ48_11905 2575893 .. 2575910 +  -4.8  -2.54192   ATCGGCGTGGTGCGC             GATGGC TTCGCT GCCGTC              CTTGCTGCTGGTGTC  42 437
 IUJ48_11925 NONE
 IUJ48_11930 NONE
 IUJ48_11935 NONE
 IUJ48_11940 NONE
 IUJ48_11945 2584577 .. 2584589 +  -3.4  -3.59252   CATATCATGGACCAC                CTCA AGGTA TGAG                TCTTGTTTCGTAGAA  51 14
 IUJ48_11950 NONE
 IUJ48_11955 NONE
 IUJ48_11960 2588076 .. 2588103 + -16.3   -3.1855   AGTTCAATGGGACAT        GGCGCGGGCGGC ACGCC GCCGCCCG-GCC        TTACCTGTTGGAGCG  89 180
 IUJ48_11965 2588522 .. 2588555 +  -2.3  -3.05343   GACGACGCCTTCGCC     GTGAAGTAGGGCGCCG CCA TGGCGACC-ATTCCGC     TGTTCCCGCTGTCCA  42 17
 IUJ48_11970 2589148 .. 2589165 +  -3.3  -2.90496   AGGGCCGCAGGCCTA             GC-CAGCC ACA GGCGGCGC             TGCTTTGGCGGAGCA  41 25
 IUJ48_11975 2590102 .. 2590117 +  -3.2  -3.29144   CGACCATTCTATGCC              CTAGGA CTTT TCCCAG               TTCTAGGGCCAGTGC  47 82
 IUJ48_11985 2592048 .. 2592070 +  -4.8  -3.55444   TCAATTTTGAGGATA           TTGGCCGTTG ACT TGAAGGCCAA           TTTGCCACATGAGCA  53 408
 IUJ48_11990 2594176 .. 2594186 +  -2.4  -3.32844   CATACACCTTCAAGC                 CGCG TTC CTCG                 TTCTCGAATGAAGGA  45 465
 IUJ48_12000 2596261 .. 2596298 + -12.7   -3.2327   CGTCTCATTACGGGC   CGGGCCATGAGCGGGGCG CAA TGCCCCGCTCATC-CACG   TTGATCATCCGTTCA  74 47
 IUJ48_12015 2598025 .. 2598056 + -10.8  -4.66987   CTGATCTGCACTTGC      CCCGTGAGCGG-GCG CAA CGCTCCTCTCACGGA      TTTTCTTCCGCTCTC  91 70
 IUJ48_12020 NONE
 IUJ48_12025 2599787 .. 2599828 +  -2.1  -3.59979   TGTTGCCGGGGCGGC GTTGAGGTTGCTTCGG-GCC AAG GGCACCAGTGCCCCTTCAAC TTTCCCCTCCGGCAG  50 21
 IUJ48_12030 2601799 .. 2601812 +  -6.7  -3.16071   TCCGATACTTGAAGC               CTGCT CCGA AGCAG                TGTGTTCCTATGCAA  51 127
 IUJ48_12035 2602365 .. 2602381 +  -2.2  -3.31726   GGATAGCTGGGCGCT              TTGTCG TTTAT CGACGG              TCTTATCTGCGGCCG  45 240
 IUJ48_12040 NONE
 IUJ48_12045 2605600 .. 2605617 + -11.3  -3.07622   AGCTATAGGCGGACA             GCCGCAA CGAT TTGCGGC              TTAACTCCCCTATAT  66 314
 IUJ48_12050 2606127 .. 2606160 +  -9.6  -4.09739   GCATTCTTCCCCGGC    CCGCGCCGGC-CGTCG CCGC TGACGTGCTGGC-CGG     TTTTGCCGCCATTGG  76 179
 IUJ48_12065 2609522 .. 2609560 + -10.4  -3.14132   GTAGGCGCCGCGGAT GTCGGCGGCGGTGCAGACC AGGT GGTC-G-ACCG-CGCCGGC  TTCCTCGAAAAGCCG  63 428
 IUJ48_12095 2615566 .. 2615597 +  -3.6  -4.72272   TCGTGATAATGCGCC      CGCATGA-ACCGGGC CTC GTCCGGCGTCAGGTG      TTTTTCGTAGAGCCG  77 384
 IUJ48_12125 2624129 .. 2624142 +  -8.1  -2.82623   AGTCGATGCGCTCGT               CCAGG AAGG CCTGG                TAGTTCTGGCCCAGC  50 294
        ypfH 2626326 .. 2626340 +  -2.1  -2.52464   TGAACCAGTCGCCGC              CCGATG GCAC CA-CGG               TGCATTGAAGGCGCG  37 3
 IUJ48_12140 2627336 .. 2627350 +  -5.6  -3.73953   TCGGACTGGCGGCGT               TGCGGC GCC GGCGCA               TTTCCTCCACGTCCT  58 196
         xsc 2642781 .. 2642812 +    -3  -2.76815   CGCTGCCGATCGACC     CGGTGCGC-GGCTG ACGCCA TGGCCAGCG-ACCG      CTTGTTCGAGCCGCT  40 12
 IUJ48_12215 2643739 .. 2643768 + -10.6  -3.78775   GTTGAAGCGGGTCGC       CCGCCGGCCTGG CACCAT CAAGTCCGGCGG        TTTGGTACTAAGCCG  74 36
 IUJ48_12220 NONE
 IUJ48_12225 NONE
 IUJ48_12230 NONE
 IUJ48_12235 NONE
 IUJ48_12240 NONE
 IUJ48_12245 2651646 .. 2651656 +  -8.2  -3.40403   AAGCAGGCGCCGCGC                 CGGC GGG GCCG                 TTCTGGTGCAAGCGA  60 51
 IUJ48_12250 NONE
 IUJ48_12255 2653718 .. 2653729 +  -3.6  -3.62046   GGCGATCACGCCTGC                GCGG ATAC CTGC                 TTCTTCCACAGCTCC  51 100
 IUJ48_12280 NONE
 IUJ48_12285 2664475 .. 2664489 + -12.8  -3.09518   GTAGACGGGCCGACG               GCGCCG TGG CGGCGC               TGTTACAACTTTTCC  72 37
 IUJ48_12290 2667101 .. 2667127 + -14.5  -4.70659   TGAACGGCGGGCGAG        GGCCGGCATTGC GCAA GCA-TGCCGGCC         TTTTTGCATGTGCGC 100 108
 IUJ48_12295 2668118 .. 2668154 +  -4.9  -2.80816   ACGTGCCAGACGATC    TGCATGCGGCTGCCGCC CAT GGCGTAGGCGGCGTGGA    TCTGCTCGATCGACA  43 304
 IUJ48_12320 2673025 .. 2673047 + -11.2  -4.29738   TGACGGACTGCACCG           CCTCGGCCAC CTG GCGGCTGAGG           TTTTCCTGGATCTGC  85 275
 IUJ48_12340 2677982 .. 2677992 +  -2.4  -4.09685   TGAGCCCGGGAGGCG                 CCGC CAT GCTG                 TTTTCCAACATGACC  58 38
 IUJ48_12345 2678234 .. 2678255 + -14.4  -5.27335   GGCCGCCATGCAAAA           GGCGCCGG CTTTGT CCGGCGCC            TTTTTCTTTGGCCAA 100 60
 IUJ48_12355 2680778 .. 2680828 + -15.3  -4.07568   CGGTCCGGGCGGTTC GCGCCGCGC-GGCTGCCCGACGCGG GCC CGGCCTCAGGCCGCCCGCGCG-CGC TTTTCCGCCGCCAGC  95 42
 IUJ48_12370 2683765 .. 2683787 +    -9  -3.14211   GCTTCCCCCCGGATG           ACGGCGACGC GCC GCGTCACCGC           TTCGTGCAGGGGCAT  56 215
 IUJ48_12385 2686361 .. 2686392 + -10.1  -3.25823   GAGCGGCGCTTGCGA     GAGC-CCGGG-GGCG CTCA CGCCGCCCGGCGCCC      TTCATGTGGCGGGGC  65 39
 IUJ48_12425 NONE
 IUJ48_12430 2696294 .. 2696325 + -13.6  -3.03124   TGCCACCGACCGGCG      CGGCG-GGCGCGACC ACC GGGGGCGCCTCGCCG      TATTCGACGATCACG  69 445
 IUJ48_12465 2705620 .. 2705646 + -17.2  -2.67515   TCAGGCAGGCCTGCG         CCGGGCGGTGCG AAT CGCGCCGGCCGG         TGATGTCGTCATAGC  84 261
 IUJ48_12505 2714127 .. 2714185 +  -5.8  -3.01712   CGGGGCGCGGGCTGA -GGC-GTCGGGCGCGGCGCGGACGGGCGGG GAT CAGGCGCG-CCGCGCC-CGCCAGCCCGCCA TCTTCAGCCGCAGCC  48 26
 IUJ48_12530 2723820 .. 2723864 +  -3.4  -3.76224   GGGATAATGCGGTTT TCCGA-CCAG-GTACCGGCGCG CTT CGCGCCGGGCCGCTCGATAGGG TTTCATCCATGCAAG  54 34
 IUJ48_12535 2724731 .. 2724742 +  -7.2  -3.34398   GCGCGCGGCTGAGGC                CGGG GCCG CCCG                 TATTTCAGGGCGCCC  55 29
 IUJ48_12545 NONE
 IUJ48_12550 2729019 .. 2729037 + -17.4  -3.01712   CACAGATTGCAGTAC             GCGCCGGC CGG GCCGGCGC             TCTTGGAGAAACGCA  88 141
 IUJ48_12555 NONE
        narH NONE
        narJ NONE
        narI NONE
 IUJ48_12575 NONE
        moaA NONE
 IUJ48_12585 NONE
        mobB NONE
 IUJ48_12595 2740724 .. 2740740 +  -2.1  -2.72144   TTGCCCGACGCCGAA              CGCCAGG CCG CCTGACC              CTTTCAAGACCATGC  38 11
 IUJ48_12600 2741443 .. 2741456 +  -4.5  -3.83026   GCGCGGCGTGGCGCG               CCG-CC GCG GGACGG               TTTGATCTGCGACAA  58 45
 IUJ48_12605 NONE
 IUJ48_12610 NONE
 IUJ48_12615 2744146 .. 2744184 + -12.2  -3.53012   TCACCGTCCAGTAGG   CGACGGCGGGGCGCATGC CGA GCGCGCGCGCCGCCATCA   TTTGGCCAGGCGGAA  73 330
 IUJ48_12630 NONE
 IUJ48_12635 NONE
 IUJ48_12640 2750786 .. 2750836 +  -6.1  -3.55444   GCGCCAGCAGGCGCC GCGCCAC-ACGCATGCGCAG CAATTGCAGCAA CTGCGCCGGCGTGGTGCCGC TTTGCAGCGTGAAGC  57 190
 IUJ48_12650 NONE
 IUJ48_12655 NONE
 IUJ48_12660 NONE
 IUJ48_12665 2755497 .. 2755524 + -14.8  -2.73364   GCGCGCACCCGCGCG        CGGCGCG-ACGGC CCG GCCGCGCGCGCCG        TGCTTGGGCTGGCCG  75 91
 IUJ48_12670 2756300 .. 2756333 +  -2.1  -2.70932   CATCCGGACGCGTGA     CCAGGACGCGCGGCG CGGT CGCGGCAGGCCCTAG      TCCTTGCCCGCCGCC  38 73
 IUJ48_12680 2758833 .. 2758853 +    -4   -3.6715   GCAGGGGATCGGGTT           TC-TGCGCC AAAA GGTGCACGA            TTTCCAGTTCGATCG  51 399
 IUJ48_12690 2761048 .. 2761061 +  -2.3  -2.52623   GCTTCGGCGCGCCCG               TGCCG GAAC CGGAA                ATCTTCTGAACCCGC  37 3
 IUJ48_12695 NONE
 IUJ48_12700 2763269 .. 2763287 + -13.1  -5.08255   AAGACCTGATTCCCA             CCCCGGC CTGGA GCCGGGG             TTTTGTTTTCCACGT 100 412
 IUJ48_12715 2766585 .. 2766621 +   -13  -3.54543   CGTTGGGCAGCGCCG   CCGAGCGC-TTGGCGGT GGTC ACCGCCAATGCGCGCAG    TTTGCCGGCCTCGAT  74 403
 IUJ48_12730 NONE
 IUJ48_12735 2770576 .. 2770599 + -11.6  -3.75153   GCCGTCCAGGCGCCA          GCGCGGGCCG CTTT CGGCCAGTGC           TTTCAGTTCCAGGCC  74 519
 IUJ48_12750 2773315 .. 2773329 +  -2.7  -3.21276   TCGAGAAATAGCAAA               GGGGC CTGTA GCCGC               TGTTCTGCCGGGAAC  43 399
 IUJ48_12765 2775366 .. 2775400 + -25.1  -3.61178   GCGGGGCAAAAGCGA    CGGGGCAGG-CCGGCG CAAT CGCCGGGCCTGCCCCG     TTTCGGGTGCGTCGC 100 53
 IUJ48_12780 2778956 .. 2778980 +   -15  -5.14563   CGCCCGGCACGCCAA         GCCGGCGCCCG TGGA CGGG-GCCGGC          TTTTTTCATGGCCGC 100 65
         pcp NONE
 IUJ48_12795 2781667 .. 2781679 + -10.5  -2.66634   ATCGGTATTTGTCCG                GCGCG CGG CGCGC                TCCTATCCTGGCCTG  59 124
 IUJ48_12800 2782750 .. 2782761 +  -7.2  -3.96093   GCTCCAGTAGGCGCG                CCGC AACA GCGG                 TTTCATATTCATATC  67 31
 IUJ48_12805 NONE
 IUJ48_12810 NONE
 IUJ48_12815 NONE
 IUJ48_12820 NONE
 IUJ48_12825 NONE
 IUJ48_12830 2788249 .. 2788267 +  -3.1  -4.08767   GACCTTTGACCCGCT             GCGTC TTGCAGTGT GACGC             TTTTCCGAACCTCCG  60 10
 IUJ48_12835 NONE
        metC 2790141 .. 2790151 +  -3.2  -3.59023   TGCAAATGACCACAT                 TTCC TTA GGGA                 TTCTGATTATGTAGA  51 47
 IUJ48_12845 NONE
 IUJ48_12850 NONE
 IUJ48_12855 2793898 .. 2793936 +  -5.8  -4.13014   GGCAGCGAGGATATC   CGGCTGATTGCGGCGGCT TGA AGCCGACTCGACCACCTG   TTTTCACGCTATCAC  66 5
 IUJ48_12865 2796891 .. 2796905 +  -2.8  -3.06501   AATTCAAGATCCGAG               CTCGAA CCC TTCCAG               TTGGCTACCGGTATA  43 91
 IUJ48_12870 2798690 .. 2798719 + -11.3  -2.58544   GTTGTAGCCCTTGGC       CTGGCAGGCGGCG ACGG CGGCGCTGGCCAG        CTTCTGGGCGTCGGC  59 396
 IUJ48_12900 2804941 .. 2804969 +  -3.8  -3.51825   GGGTCGCGCCGTATC       CGGCCGCCACCAG GCTC TTGATGGCG-TCG        TTGTAGTTCAGCTGG  49 290
        argC 2806735 .. 2806754 + -11.4  -3.01712   CCTGAACGCAATTGG            GGCGCG-CC ATC GGACGCGCC            TCTTGGCCGGCCAGC  65 36
 IUJ48_12925 NONE
 IUJ48_12930 NONE
 IUJ48_12935 NONE
 IUJ48_12940 2813412 .. 2813428 +  -7.2  -3.24747   CGTCGAGGAACAGCG              TCGCGG GCAAG CCGCGG              TTGCTCATCTGGCGC  53 190
 IUJ48_12950 2815534 .. 2815574 +  -9.7  -3.54307   CGGACGCCGGCCCCG GGCGG-G-GGCCGCGCCGGC GTCG GCGGGC-CGGTCGCGCCGCC TTTCGCCCGGCTCTT  65 220
 IUJ48_12955 2816526 .. 2816552 + -25.2  -4.65895   TAATCTCCCGGGAAA         CGCCCGGACCGC GCC GCGGTCCGGGCG         TTTTTCAGTCCGGCG 100 38
 IUJ48_12960 NONE
 IUJ48_12965 2818064 .. 2818074 +  -2.4  -3.33696   GCACATGCTGTAAGG                 GCGG TAC CGGC                 TTCGTTCCCCCGGCC  45 28
 IUJ48_13030 NONE
        fetB 2834658 .. 2834698 +  -4.4  -3.75665   GGTTGATGGCCGAGC  GCTGAGCGGCGCCCGCGG CTGTC TCGTCGGCGGCGCCCGGA  TTTGATGAAATATCG  56 21
 IUJ48_13040 2835521 .. 2835548 + -12.6  -5.40072   CGGAACAAAGAAAAA        GCCGACGGCTCC TTGC GGAACCGCCGGC         TTTTTTTGCGCCACC 100 109
 IUJ48_13050 2839927 .. 2839944 +  -9.8   -5.4505   AGTCAGTCAAACAAA             CCCGCC CCACGA GGCGGG              TTTTTTGTTGCCGCC 100 147
        ilvA 2841717 .. 2841774 +    -9  -3.07043   TCGCGCGGCGGGCCT TCGGCCAGCAGCGCGCCG-CCGTGC AGCAGCAGG GCATGGTCGGCGTGGCGCAGGGCGA TGTTCAGGTCGTGCA  55 164
 IUJ48_13080 NONE
 IUJ48_13085 2847634 .. 2847652 +  -3.8  -3.17075   GGTGGGATAGCCGTT            GGCCAGG ATTCGG CC-GGCC             TTGCGTTCCAGCACC  45 315
        garD 2851791 .. 2851801 +  -2.4  -3.53012   TCCCGTGACCTGATT                 GCCG TCG CCGC                 TTTCAACGCAAGGCC  47 28
 IUJ48_13105 NONE
 IUJ48_13110 2853932 .. 2853964 + -30.7  -5.86061   GCCCCCAAAAGACCG      CGGACCGTGCGGCGC CAG GCGCCGCACGGTCCG      TTTTTTTTCCTGGCG 100 62
 IUJ48_13120 2855363 .. 2855376 +  -3.7  -4.17048   CGTCCGATCCGCTTT               CGGCG CCCG CGCCA                TTCTTTTCGCGCGGC  62 133
        copC NONE
        copD 2856684 .. 2856696 +  -5.5  -3.02461   GGGTGTCGTGAAAGG                CGTCT TGA AGGCG                TCTTGAAGGCCGTTC  48 42
 IUJ48_13190 2871385 .. 2871419 +  -7.2  -3.48395   GACTGGTCGAGGCGC    TGCCG-TCC-TGACGG CGCGC CCGGCACGGACCGGCA    TTGTGTACAAGGGGT  57 15
 IUJ48_13195 2873000 .. 2873012 +  -3.3  -3.96148   CTCAAGTGAGCGCGC                CGGCA TGC TGCCC                TTTCTGCTGAGGCGC  58 32
 IUJ48_13200 NONE
 IUJ48_13205 NONE
 IUJ48_13210 NONE
 IUJ48_13215 2876504 .. 2876526 +   -12  -3.67296   CACGTCAAGGCAAGG           GGCTGATCGC CGC GCGATTGGCC           TTTCCGTGCGTCCTA  77 43
 IUJ48_13220 2877028 .. 2877073 +  -3.2  -3.05844   GTCCTTTCCATTTTT TGCTGG-CGCGCAC--CGATGCG GCC CGCGTGGTCGCGCGCGTCCAGCC TGTTCAGATCCAGAG  43 46
 IUJ48_13225 2879418 .. 2879452 +  -4.4  -3.53012   GGGCGTCTCCAGCAC   CGGC-C-GCAGCG-CCAG GCC CTGGTCG-TGCAGCGCCG   TTTCCAGGCGCCGGC  49 279
        metC 2881352 .. 2881378 +  -4.3  -3.01712   GCGCCGTCGCTCGCC        CGCGCGGCCGGA GCCT TCCGGC-GCACC         TGTTCAACACCGGCC  44 52
 IUJ48_13240 2882580 .. 2882592 +  -3.3  -2.86432   GTACGTCTTCAACTG                ATCGG CGG CCGAG                TCTCATCATGTTCAA  41 25
 IUJ48_13245 NONE
 IUJ48_13250 NONE
 IUJ48_13255 NONE
 IUJ48_13260 NONE
 IUJ48_13265 NONE
 IUJ48_13270 2889747 .. 2889764 +  -7.7  -4.08692   GGGCCAGGGGCCGCG             CGCGTGT TCTA ATACGCG              TTTTACGAGCCCTTG  71 57
 IUJ48_13275 2891528 .. 2891544 +  -6.5  -2.87132   TGCCAGCCGGCTCAG              GCCGC TTCCATC GCGGC              TGTCTGCCGCGCCGC  49 75
 IUJ48_13280 2892381 .. 2892405 + -10.7  -3.78934   CATAGCGGTGACGAA          CGGCTCGTC TAAGCCT GGCGAGCCG          TTGTTGTCGGCGCAC  74 42
 IUJ48_13285 NONE
 IUJ48_13290 NONE
        arsB NONE
 IUJ48_13300 2895790 .. 2895805 +  -3.2  -3.09933   TTGAAATTCCCGTCT              TGCGTC AAGA GAGGCA               TTGCATGAGTTCCAC  43 37
        arsH 2896804 .. 2896846 + -15.4  -2.70932   CCGAGCGGATCGGGA CCGTAGCCGTCGCCGTGGCG CGG CGCTTCGTAGACGGCGACGG TGATTGCCCAGACCG  70 255
 IUJ48_13330 2901214 .. 2901229 +  -3.2   -4.1899   GTATTTTTTCCGCCC              GGAGGT GCCT ACGTCC               TTTTCCCTGAAGTGC  60 397
         mqo 2903004 .. 2903024 +   -14  -5.93809   GTAGTGGCCTGCCCC            GCCCTCCC TTTCC GGGAGGGC            TTTTTTTTGTACGGC 100 37
 IUJ48_13340 2904181 .. 2904220 +  -6.3   -3.2963   CACGATCCCGCTGAA  CCGC-TGCGCCAATCTCG GAGCG CGAGACGGACGCGGGCGG  TTCTGCGCGCATCGT  51 88
 IUJ48_13345 2905680 .. 2905697 +  -3.3  -2.60496   AATTCCAACCCGAGG             GCCATCG AGCA TGAAGGC              GTATTTCCACGACGA  39 12
 IUJ48_13350 2906713 .. 2906745 +  -5.4  -2.90615   GCCGGAACCTGATCA     CGGGGCCGGCG-CGG CGGA CGGATACCGGCCCTG      TCCTTTCGCCGGAAT  45 29
 IUJ48_13355 2907808 .. 2907850 + -11.2  -2.58861   GGGCAATCCGTCCGA CCTTGCCGCCCGCGCACGG CACGAA CCGTAGGCG-GCGGCGGGG GTTCTGGCGATAATG  62 88
 IUJ48_13360 2908840 .. 2908857 +  -5.5  -3.57144   GCGCGAACATCGGCA             CCGGC GGCGTCAG GCCGG              TTTCGCCGTGCACCA  54 318
 IUJ48_13370 2909725 .. 2909747 + -14.9  -5.46629   CAAGGCGTGAGGGCG           TGGCGGGAC CGCGT GTCCCGCCA           TTTTTTTGGCCTGTT 100 31
 IUJ48_13375 NONE
 IUJ48_13380 2911619 .. 2911651 +  -9.9  -4.09739   GCCGGCGCGGATTCC     CGGC-GGCG-CGTCA GTCGA TGGCGGCGCCGGCCG     TTTTCACGACCTTGC  76 87
 IUJ48_13435 2921312 .. 2921345 + -12.3  -3.53012   GGCCGGCGCTGCCGG     CCGACAGCGCGGC GGCCTAGG GCCGCGCCGCCGG      TTTGAGCGCGAGGCC  75 6
 IUJ48_13445 NONE
 IUJ48_13450 NONE
 IUJ48_13455 2924905 .. 2924917 +  -9.1  -2.62263   CAAGCTGCCGAAATG                GCCCT TCA AGGGC                TGATATCCAACCCAT  55 10
 IUJ48_13460 2926552 .. 2926567 +    -6  -2.62184   GAAAAACCATGATGC              GGCGCG GGGC CGCGCG               TGATATGCAAGCGCG  45 29
 IUJ48_13465 NONE
 IUJ48_13470 NONE
 IUJ48_13475 NONE
 IUJ48_13480 2930507 .. 2930517 +  -2.4  -2.82327   ATCGCCACTTGATCG                 CCCC GCC GGAG                 ATTTCCATGTCCCAA  40 40
 IUJ48_13485 NONE
 IUJ48_13490 2932737 .. 2932751 +  -8.5  -2.58544   TTCCTGCCGCGGGCA               GCGCC CGCCT GGCGC               CTTGTGCGCGTGCCG  53 55
 IUJ48_13495 2934459 .. 2934469 +  -2.4  -3.17051   GCCCTTTTTTCCGTC                 CGCC CAA GGAG                 TCTTCATCATGCAAG  42 63
 IUJ48_13500 2935458 .. 2935470 +  -4.8  -2.70932   ATCACGCTGCCCCAT                GCTG CGCGA CAGC                TCGTTGAGCGCCCCG  43 151
 IUJ48_13530 2941828 .. 2941850 +  -6.8  -3.14051   TCTCTTTGCCTTTCT           GGCCGGGCCG TTC TGGACCGCCC           TGTTCCTGGGCCTGC  51 48
 IUJ48_13535 2942272 .. 2942286 +    -7  -3.19463   GTCATCCCCGTCGTC               GCCAGG AGA CCGGGC               TTGATCCGTCCTCGC  54 7
 IUJ48_13540 NONE
 IUJ48_13545 2944467 .. 2944484 +  -7.7  -3.54424   GGATGCGGCGGAAAG             CGTGGAA CCCC TTCCGCG              TTTGCGGCGATCCGC  60 65
 IUJ48_13550 2946238 .. 2946248 +  -8.2  -2.71364   CGGCAGCACGGGCGA                 GCGC TTG GCGC                 TGGTTGCCAGGGTGC  52 270
 IUJ48_13565 NONE
 IUJ48_13570 NONE
 IUJ48_13575 NONE
 IUJ48_13580 NONE
 IUJ48_13600 NONE
 IUJ48_13605 2956634 .. 2956644 +  -2.4  -3.53012   CGCCGGCTCCAGACC                 GGCG GCG CGCA                 TTTCGGCCACGCCGC  47 283
        soxR NONE
 IUJ48_13620 2959715 .. 2959737 +  -9.8  -4.63184   TCGGCGCGGATGTGA           TAACCCGCCG GGG CGGCGGATTG           TTTTTCGCATCGATT  88 418
 IUJ48_13630 2960423 .. 2960443 + -10.3  -2.85351   GGCCGGTGGATCGAA            CCCGCCATG CCG CGCGGCGGG            TGTCCTGTCGGCCAG  60 316
 IUJ48_13640 2961152 .. 2961162 +  -2.4  -3.65351   TTTCCGTCCCGGTTC                 GCCG CGA CGCC                 TTTCCGTGCCCCTGC  50 61
 IUJ48_13645 2961968 .. 2961978 +  -8.2  -3.08679   TCCAGGCCGCGACCT                 CGGC GGC GCCG                 TCTTCCGTCACCGCG  55 321
 IUJ48_13750 NONE
 IUJ48_13755 2992209 .. 2992238 + -16.5  -3.53012   GCCACGCCGCGCCGA       TGG-ACGGCCGCCC CCG GGGCGGCTGTCCCA       TTTGCAGAGGCGCGA  91 41
 IUJ48_13765 2994181 .. 2994200 +  -3.4  -2.62184   CGCGCCCAGACGCGG            CGCCAGCA TCAG TGCGGCCG             TGATGTAGAACACGC  40 252
 IUJ48_13775 2995507 .. 2995517 +  -5.4  -2.79796   ATCGGCATATCCCTC                 TCTC CAG GAGA                 TGTCATGCCATCCGA  45 81
 IUJ48_13780 2996365 .. 2996409 + -14.8  -2.78384   GCTGCCAGCCGCCGC GGGCGCGCCACGGCGGGCGCG GCGT CGCGCC-GCCGGCGCGCGCAG TATCCTCGCGGCCGC  75 41
 IUJ48_13790 2999402 .. 2999417 +  -4.6   -3.8709   GCACCCAGCGCAGCC              CGAGCG ACAG CGATCG               TTTGTCGGCCAGTTT  60 165
 IUJ48_13805 NONE
 IUJ48_13810 3005457 .. 3005469 +  -4.8  -2.83715   GACTATCTGCGTTCG                CCAG GGCGG CTGG                TGTCATCATGATCGA  45 2
 IUJ48_13815 3006560 .. 3006572 +  -4.8  -2.71681   ACAACGACGGATGTA                GTCG ATACA CGAC                TGCTTGCGCCGCTTG  44 206
 IUJ48_13820 3007220 .. 3007232 +  -2.6  -2.79684   CCGTACAAATGCCTC                CTCG TTGCC CGGG                TGGTTGCATTGCTGC  40 70
 IUJ48_13825 NONE
 IUJ48_13830 3008515 .. 3008531 + -15.1   -3.4052   CCCGCTGATCGCTCC              GCCGCGC CAC GCGCGGC              TTCATTGGCTTACCG  84 33
 IUJ48_13835 3011208 .. 3011227 +  -7.8  -3.28712   TGCCGTTGGCCTGCA            CCGTGGACG CGC CG-CCGCGG            TTGTCGCGCACCGCG  55 500
 IUJ48_13855 NONE
 IUJ48_13860 3016920 .. 3016942 +  -7.6  -4.07568   GCGTCAGCACGGCCT           GGCCGGCG AAATGCG CGCCGGCA           TTTTCCAGGAACAGG  69 89
 IUJ48_13870 3019421 .. 3019433 +  -9.1  -3.28712   CCCGCGCGCTCAGTG                GACCG TGG CGGTC                TTGTCCCGGGCGGGC  62 328
 IUJ48_13890 3021870 .. 3021902 + -10.6  -4.07568   TGCCAGCCTTTTCTC     CATGCGCCGCG-CCCG CGA CGGAACGCGGC-CATG     TTTTCGCCAACGCAG  79 522
 IUJ48_13900 3022279 .. 3022320 + -15.7  -3.15544   CGCCAGTAAGGCAGG CGGGT-CGCCCGCGCGCGCC GCC GGCGCGCGCGGGCATGGCAG TTGCTCGGGATGGCC  82 32
 IUJ48_13905 3023268 .. 3023293 + -12.5  -3.61232   GGCGACTGAGGCCGC         GGCCAGCCTGC GCCT GCGGACTGGCC          TATTTCTGTGGCGCC  77 32
 IUJ48_13920 3025453 .. 3025484 +   -13  -3.14132   GCAGTTGCGCTGCAA      GTGGCGTGCCTG GGCGGCGG CGGGCACGCCGC       TTGCTCACCCGCGCA  72 424
 IUJ48_13930 3026080 .. 3026096 +  -4.4  -3.62522   TCGGGCTGATGCCCA             GCACGGC CGCC GCC-TGC              TTCTTGACGCCCTTG  51 158
 IUJ48_13940 3028620 .. 3028666 +  -2.2  -4.15044   GCATGATTATTGCAT CGTTCCAGGAATGC--GCCGCC CTTCC GGCGGCCCGCGTTGCAGGAGAG TTTCTTGGGACACCC  58 177
 IUJ48_13945 3030442 .. 3030458 +  -9.3  -3.17075   CCGGGGCGGCCTGGC              CCGGCGG CAC CGGCCGG              TTCGGTTGCACGGCG  56 345
 IUJ48_13965 NONE
 IUJ48_13975 3037389 .. 3037427 +  -7.3  -3.90586   CCACCCGGAACACGC   GGCGCCAGCGTGAAACC CGCCC GGTATCGCCTTGTCGCC   TTTGTCACCTCCTGT  67 13
 IUJ48_13980 3039607 .. 3039650 +  -4.5  -3.53811   GTCCTCGGTAAGCTC CAC-CTTGAC-CAGGCGGGTC GGCA GGCCGGCCTGCGTCACGCGCG TTTCCAGCGCGTCCG  54 446
 IUJ48_13990 NONE
 IUJ48_14000 3043737 .. 3043765 + -12.3  -3.66819   GCTGGCGCGCCTGCG        GCGCGCGCCCTGA ACG TCGCGGCGCTCGC        TCTTTGTGGTTTCAT  77 13
 IUJ48_14005 3044463 .. 3044495 +    -4  -5.14563   CCCGCGCACGGCTGC     TG-GCCGTTCCCGCC ACAC GGCAGGGGCTGCGCA      TTTTTTGATCAGCCC  87 110
 IUJ48_14010 NONE
 IUJ48_14015 3046449 .. 3046489 +    -9  -3.15579   TGCCCCATCCGCCTG TCGCGCC--TGGCGCGGC CCACCCT GCCACGCCGCCGGCGCGA TTCCTCCACGGTTCC  57 105
 IUJ48_14020 3048318 .. 3048342 + -12.8   -5.0133   CGCGTCAACCCCAAC          CACGTCCCGC TGTCC GCGGGACGCG          TTTTTTAGCGCCCTA 100 135
         psd 3049267 .. 3049308 + -12.9  -2.52543   GACTGCGCAAACCGA TGAGCGCGTCGGTTCGCGC GACT GCGCAAACCGATGAGCGCG  TCGGTTCGCGCGACT  67 67
 IUJ48_14030 NONE
 IUJ48_14035 3052250 .. 3052265 +  -2.5   -3.7732   CAGGCCCAGCACCTG              CTGGG TGATGC TCCAG               TTGTTGGTGTCGACG  53 296
 IUJ48_14045 3054195 .. 3054237 +  -3.9  -3.74693   CCAGGTCCAGCATCA GCGCCGTATGGCGGGCGCCG CGCT TGGCGGCCTCCA-GCATCGC TTTCATGCGCTGCAG  55 424
 IUJ48_14060 NONE
        rocF 3056854 .. 3056875 +  -6.5  -3.57263   CCGTCGCGGCGCACC           GCCTCGGCCG CCG CCGCC-AGGC           TTTGCACGTGGGCCT  59 55
 IUJ48_14075 NONE
 IUJ48_14080 3060104 .. 3060149 +  -3.1   -2.8844   AGTTGGATTGAAGGC GGCGCCCCTCGCCAGGGCCCG CCCGGA CGGTCGC-GGCGAATGG-GCC TATCATGTCATCTGC  41 52
 IUJ48_14085 3060619 .. 3060634 + -11.8  -4.13767   CGCATTACCCCTTCT              GGCGGC CTCG GCCGCC               TTTTCCGCTGAACCC  85 70
 IUJ48_14090 3061833 .. 3061846 +  -5.2  -2.94912   GTTCCAGCCACACTT               CGGC GCGGCG GCCG                TGTATGCGTTCACGC  44 298
 IUJ48_14105 3064199 .. 3064226 + -15.5  -4.66537   ACCGGCCGGCGCGAA        CGCCCCGCCGC CCTTGC GCGCCGGGGCG         TTTTCTCTTGCGCGC 100 59
 IUJ48_14115 NONE
 IUJ48_14120 NONE
 IUJ48_14125 NONE
 IUJ48_14130 3069318 .. 3069341 + -18.2  -3.53012   CAGCGCGTATGCAAA          GATCGGCCGC CCGC GCGGCCGATC           TTTGCGGGCCCCGCA  93 248
 IUJ48_14160 3074904 .. 3074922 +    -3   -4.2717   ATGAATAATCATTAA             TACGCCGT TTG ACCGCGCA             TTTTCATACAGTACT  64 33
        ugpB 3078077 .. 3078099 + -14.9  -4.30978   CGGCTGTTTCACCAG           GCGGCGGTT AATCC AACCGCCGC           TTTTCGTACCTTGGG 100 213
        ugpA 3078986 .. 3078998 +  -3.3  -3.29325   GTTCCGCTACGTCGA                CCGCA AAG TGCAG                TATTGATTCTCGAGG  45 7
        ugpE 3079900 .. 3079919 + -11.4   -2.9155   CCGCGCCTTCGGCTT            GCTGCCCCC CGA GGGGGC-GC            TCTCATCTTGAGGCG  65 51
 IUJ48_14190 3081528 .. 3081541 +  -2.3  -4.63486   GCCACTGCCCACGTC               GCTGT GTTC ACTGC                TTTTCTTGAAGGCGT  71 462
 IUJ48_14220 3087763 .. 3087787 +    -7  -3.41051   CGCGTGCTTGCGGAT          GCGCTCCGCC AGCTC GGCCGAGGGC          TTCTCATACCCATAG  58 172
 IUJ48_14295 NONE
 IUJ48_14300 NONE
 IUJ48_14305 3110141 .. 3110164 + -13.8  -5.00616   CGCCGGAAACAAAAA          GCCCCGTCGC ATGT GCAACGGGGC           TTTTTTGCCACGAAG 100 83
 IUJ48_14315 3112422 .. 3112437 + -11.8  -3.02144   TGACGCTACTATAGG              CGCCGC CCGC GCGGCG               TCTTCCCCGCAGTAA  68 135
 IUJ48_14320 NONE
 IUJ48_14325 3115113 .. 3115144 + -13.6  -3.17219   AGGCGCTCCACTTCC      GCCGGCGTCGAGCC ATAG GGCATGAAGCCGGC       TTGCTCCAGCTTGTC  72 221
 IUJ48_14335 NONE
 IUJ48_14340 3118521 .. 3118542 +  -3.6  -3.82084   CCACCTCGACGGAAC           CG-ACCGCC AGGTA GGCGGCGCG           TTCTTCATGTTCGGC  58 359
 IUJ48_14355 3121133 .. 3121157 + -18.5  -3.01924   CGCGAGAGGAGGCCA          CGCGGGCGACG CAG CGCCGCCCGCG          TGTTCCAGGCAAATG  89 53
 IUJ48_14385 3129473 .. 3129490 + -14.1  -3.07344   CCTGCAGCTCCAGCG             CGGCCGC GGCG GCGGCCG              TCTGTTCGACCATGG  76 106
 IUJ48_14395 NONE
 IUJ48_14400 3133783 .. 3133793 +  -8.2  -3.28712   GCGCCCGCACCAGGC                 CGGC GAT GCCG                 TTCTCGGCCAGGCCC  59 77
 IUJ48_14410 3135646 .. 3135665 + -16.4  -4.24342   GGCCGGATGCAATAG            GGCCGCGG AGTT CCGCGGCC             TTTCTTCATCGCCCG 100 80
 IUJ48_14425 NONE
 IUJ48_14430 3141624 .. 3141640 +  -9.3  -3.36823   CGGCAGCTTCTGACC              CTGGCGC CCG GCGCCCG              TTACCTTTTCCCGAC  64 28
 IUJ48_14435 3142452 .. 3142488 +  -6.5  -3.28712   TAAGGGCCGCCGCGC   GGC-GCGCGCTTGCAG CCTCCC CTCCGAGGGCGCTGCC    TTGTCGCGAGGCCGC  54 50
 IUJ48_14450 3153373 .. 3153391 + -11.7  -5.12068   CGAATCACGCAAAAA             GGAGCGC AAAAC GCGCTCC             TTTTTGTTCAATGTG 100 56
 IUJ48_14460 NONE
 IUJ48_14465 3156186 .. 3156229 + -15.3  -4.15044   GCGGCGCGCTGATCC GC-GC-CCGCGCGGCGGTCCCG CCA CGGG-CCGCCGTTCGGGGCCGC TTTCTTGCGGGGCCG  95 29
         gmk NONE
 IUJ48_14475 NONE
 IUJ48_14480 3159590 .. 3159607 + -10.5   -5.4505   CGAATTGCGATCAAA             GGGGTGC TCCG GCGCCCC              TTTTTTCTTGCCCCA 100 53
 IUJ48_14490 3161481 .. 3161511 +  -7.5  -3.02144   CCACGCGCCCGATGG      CGCGG-C-GGGCGGC GAC GCCGCTCAGGCCACG      TGTTGCAGGAAGTCC  54 106
 IUJ48_14510 3165015 .. 3165038 + -13.9  -3.04263   TCCGGAGTAGGAATA          CTTGCGCGC AGAACC GCGCGCAAG           TATTAGCAATGCACT  75 31
 IUJ48_14515 3166171 .. 3166193 +  -8.5  -2.90161   ACACCGTCAATAGGT           GCCTTGAGA GTCTA TTTCAAGGC           TGGTTGTAGTTCCTA  55 102
 IUJ48_14520 NONE
 IUJ48_14525 3168463 .. 3168474 +  -7.2  -3.53012   GAGCGCCGTAGCCCC                CGCC TCCC GGCG                 TTTCCACCACGAACA  57 277
        dctP NONE
 IUJ48_14555 NONE
 IUJ48_14560 3176664 .. 3176682 + -10.3  -5.75342   ACCACCCGCCCAAAA             CCCCGTT CCTGC AACGGGG             TTTTTTTTGGAACAA 100 48
 IUJ48_14565 3178095 .. 3178117 + -16.3  -5.86061   GCCGCATGTCAAAAA           GCCCGTCGC CTCGC GCGACGGGC           TTTTTTTTCGTCCAG 100 69
 IUJ48_14635 NONE
 IUJ48_14640 3194074 .. 3194098 +  -7.7  -2.71364   ATACGCCACCGAGAG          CCCGGCGGTGC GCA GCATCGGCAGG          TCGTTGGCGCCGTCG  49 200
 IUJ48_14655 NONE
 IUJ48_14660 NONE
 IUJ48_14665 3199619 .. 3199636 + -12.7  -4.55128   AAGGCCAAGCAAAAA             CGCCACC TTCG GGTGGCG              TTTTCGTTTCAGGCT 100 52
 IUJ48_14675 3201429 .. 3201462 +  -9.3  -3.63569   CGCGGCGGCCGGGTT     GGCCTGGTCGGCCGC CAGC GCGGCCTCGCCGGCC      TTCTTGGCGGCTTCG  63 432
 IUJ48_14685 NONE
        ugpQ 3205859 .. 3205887 +  -5.7  -3.07962   CGAACTGGCCGCCAT        CCGGCCGGCCGCC TGA GGCCCCCGCCCCG        TGTTCAGCTATCGCC  49 10
 IUJ48_14695 3206799 .. 3206819 + -18.3  -4.18018   GCCGGAACGAAAAAA            GGGCTGCCC ACG GGGCAGCCC            TTTTGCATGGAGACG 100 47
 IUJ48_14715 NONE
        cueR 3212441 .. 3212462 + -11.5  -3.67597   CCCACTAAGAAAAAA           GGGCAAGCC AACC GGCCTGCCC            TTCTTGCATGCGGCC  74 33
        plsY 3222369 .. 3222384 + -11.8   -4.4078   CGGCACAAATGAAAA              GGGGGC CGCG GCCCCC               TTTTCATTGCCCGGC  95 64
 IUJ48_14780 3224860 .. 3224889 + -20.1  -5.14563   GCGCCCCATGCAAAA       CCGCCGCGCTTCCG GTC CGGAAG-GCGGCGG       TTTTTTCATGCCGGC 100 53
 IUJ48_14790 3226747 .. 3226761 +  -5.6  -2.62184   CAACCATTGCGACGC               GACCGG TCC CCGCTC               TACTATGGACCGGCA  45 98
 IUJ48_14795 3227253 .. 3227268 + -11.8  -3.34962   ACGCGTGATGCACAA              GGGCCC CTCG GGGCCC               TTGTCGCATGTCACG  73 33
 IUJ48_14885 3245796 .. 3245819 + -11.6  -4.09511   GGCCGGCCGCCGCAA          CCGCCTCGCC GAAT GGCCGGGCGG           TTTTCGCCACATGTT  81 433
 IUJ48_14890 3247133 .. 3247149 +  -7.9  -4.09685   GCATCACGTCCATCG              GCGCCTG GCG CACGCGC              TTTTGCAGGATGGCG  69 384
 IUJ48_14920 3253957 .. 3253973 +  -7.9  -2.66316   CGCGTCTTGTTACCG              GCAGGCG CGC CACCTGC              TGCTATGCTGCGGCC  51 48
 IUJ48_14925 NONE
 IUJ48_14930 NONE
 IUJ48_14935 NONE
 IUJ48_14940 3256152 .. 3256167 +  -7.6   -3.5394   GCGGCCGATGCGGCG              TCGGTT CCCG AACCGA               TTTCCGAACCCATTT  60 123
 IUJ48_14945 3258043 .. 3258081 +  -7.2  -3.20382   CGCGCGCTTCTACAG   GGCGCGCGCGATCACCAG CCG CTGGATGTCGCTGGTGCC   TTCGTAGATCTGGCA  54 42
 IUJ48_14960 3261206 .. 3261240 +  -2.8  -4.49389   GCACCGCTTCGGCCC     GCAGGTCGGGCA CCGCCCTCACC TGCTCGATCAGC     TTTTCCTTGTCGAAT  68 440
 IUJ48_14970 3262415 .. 3262430 +  -4.6  -3.14564   GGCGTTGAGCGGATC              GGCGAT GACC AGCGCC               TTGATGCGGGCATCC  47 389
 IUJ48_14980 3264499 .. 3264530 + -20.2  -5.40072   TGGGCGGTTTATCGC      CGCGCGTTTCCGGG TCCG TCCGGGAACGCGCG       TTTTTTTCGCCGGAC 100 105
 IUJ48_15000 3267498 .. 3267533 +  -8.8  -2.60212   TGTGCGCTGCCCGCC    TGAGGGACCGCGCGGCG ATG CGC-GCGCCGGCCCGCG    ATTGTGCGATCATCG  53 23
        catB 3268297 .. 3268318 +  -5.7  -3.53012   TCACATGCAGCAACC           TAGGACGGC TGCC GCCGTCCAC            TTTCCGGCGCAGGCG  55 56
 IUJ48_15050 NONE
 IUJ48_15055 3277868 .. 3277891 + -10.2  -2.75183   TGAAATGACGCGCTG          GCGC-CGCGCG GCC CGCCCGGGCGC          TGCTTGCATCCAGGT  59 47
 IUJ48_15075 NONE
 IUJ48_15080 NONE
 IUJ48_15085 NONE
 IUJ48_15090 NONE
 IUJ48_15095 NONE
 IUJ48_15100 NONE
 IUJ48_15105 NONE
 IUJ48_15110 NONE
 IUJ48_15115 3290205 .. 3290217 +  -3.3  -3.10715   CTCGCCGACGCCAGC                GCGGT CGA ACCTC                TTGCGTGATCATCCC  43 74
 IUJ48_15120 3290977 .. 3291033 +  -7.9  -2.98545   TCGAAGGTATTGGCC TGCGCCGCATTGGCGCGGGCGCGCCAG CCTTC CTGGCGCGCCAGC-CAGGTACG-CGGA TCATTGTTGTCGAAC  52 320
 IUJ48_15130 3292431 .. 3292473 +  -4.2  -3.35371   CCACCGCATCGGCGC GGC-CCGCG-GCG-ATCG-CCG CCT CGGCCGATTCGCGCGTGAAGCC TTCGTTGGCGATGTA  47 236
 IUJ48_15150 3294897 .. 3294914 + -12.7   -5.1861   CGCGCCAATCCGGAA             GGCTGCC GCAA GGCAGCC              TTTTTTCATGGTCCG 100 54
 IUJ48_15155 NONE
 IUJ48_15160 3296642 .. 3296652 +  -2.4  -2.52464   ACGATGCGCCGCGCC                 GCCC GCC GGAC                 TGGATTCCGGCGCAC  37 46
 IUJ48_15165 3297759 .. 3297771 + -10.5  -2.70932   CTCCTGTCCGGCGGC                GGCCG CTT CGGCC                TGGTTGAAGCCGGCG  59 502
 IUJ48_15175 NONE
        phrB 3300616 .. 3300626 +  -5.4  -2.92439   CGGCTTGCGCTCATT                 TACG TTT CGTA                 TAGTTTCAGAATGTT  46 78
 IUJ48_15185 3302870 .. 3302888 +  -3.1  -3.12668   CGTCGAGTTCCAGCG            C-GGCG-CG CAC CGACGCCAG            TTCGCTCTCGCGGTC  43 482
 IUJ48_15205 3306403 .. 3306456 + -11.6  -2.57132   TTCCACCTGCTTGTC GCCGCGCGCCTGCGCGGCCT-TCAGG CCAG CCTCCCAGGCCTCGCGCGCGC-CGGC CTTGTCACCCCGCCC  59 126
 IUJ48_15215 NONE
 IUJ48_15220 3308584 .. 3308599 +  -8.2  -2.72344   CATCGTTCGCGCCCT              GGCGGT CCCC GCCGCC               TGATTCACCCTGAGG  53 7
 IUJ48_15230 3310254 .. 3310271 +  -9.1  -2.79831   CCCGGGTATTCGGCC             GC-GCGCC CGG GGCGCCGC             TATCATGGGCCTTCC  58 73
 IUJ48_15235 NONE
 IUJ48_15240 NONE
 IUJ48_15245 NONE
 IUJ48_15250 3312624 .. 3312645 +  -7.1   -4.3898   TTTGAGTCGGACGGT           CGCGCCCGC GCGC GCGGCCGGG            TTTTCTGGAGGTAGT  75 52
 IUJ48_15255 3313565 .. 3313582 + -14.1  -4.43815   GGCCCAAAATGGAAA             CCGCCCC TGTC GGGGCGG              TTTTCCTGTCTTCCT 100 114
 IUJ48_15265 3317143 .. 3317173 + -16.8  -2.78384   CATGACGGCGGGCCC       GGGTGCGCGGCGGA CGT TGCGCCGCGCACCG       TCTCATGCGGACAGC  81 72
 IUJ48_15320 3327532 .. 3327557 + -10.3  -3.02144   GGGCATCGAGCGCAT         CGTGGCGCGTC AACT GCCGCGCCACC          TGTTCCGCCAGGTCG  59 355
        smpB 3333646 .. 3333674 +  -5.8  -3.18681   AATGGCGCAGCACGG        CGTCGCCGGCGG CGTGC CCGTGGGTGTCG        TTGATGCGCTTGAAA  50 424
 IUJ48_15380 NONE
 IUJ48_15385 3337900 .. 3337923 + -19.6  -4.65895   GCGGCCCGAAAAAAA          GCCCGCGCCA TCCC TGGCGCGGGC           TTTTTGCATGGACGC 100 83
 IUJ48_15395 3341558 .. 3341596 +  -8.7  -2.71681   ACGATGGCGCCGGCC  CGCCGCCATTGCG-AGCC GGAA GGCAGCGTCACGGCGGCG   TCATTGGGCAGCTTC  52 251
         map NONE
 IUJ48_15490 3361932 .. 3361946 +  -4.2  -4.11216   CCAGACGGCCGCCGA               CCGCAT ACA ATCCGG               TTTTCGGCCTGGCGA  62 61
 IUJ48_15495 NONE
 IUJ48_15500 NONE
 IUJ48_15505 3363883 .. 3363902 +   -15  -4.18018   ACGGACAAAAAAAAA            GCCGCTCC CCAG GGAGCGGC             TTTTGCATGGGGCGC  95 62
 IUJ48_15530 3368808 .. 3368837 + -14.3  -3.55071   GGGCCACCGGCATCC       CCGGGCAGCGGC CGCAGAA GCCGC-GCCCGG       TTTCCCACCATCTGG  81 48
 IUJ48_15535 NONE
 IUJ48_15540 NONE
 IUJ48_15545 3372242 .. 3372273 +  -8.7  -3.36273   TTGAACCCGCGCCCG     TCC-GCG-CCGGCCG GCCA CGGCCGGGCTCAGGA      TTGCTGTTCCAGCCC  60 37
 IUJ48_15555 NONE
        fliD NONE
        fliS NONE
 IUJ48_15570 NONE
 IUJ48_15575 NONE
 IUJ48_15580 NONE
 IUJ48_15585 3378491 .. 3378520 + -17.8  -2.79302   TGGCGGATCCGCTTG       GCGGGGCTGCGG CATGAT CCGCCGCCCCGC        TGTCCTGCCCGTGGT  87 118
        fliF NONE
        fliG NONE
        fliH NONE
        fliI NONE
        fliJ NONE
 IUJ48_15620 3385992 .. 3386007 +  -4.6  -4.62336   CAATAGCTTGAGATA              CACGGC TTTC GCCCTG               TTTTTCGCCTCCAAT  77 84
        fliL NONE
        fliM NONE
        fliN NONE
        fliO 3388669 .. 3388713 +    -9  -3.01712   CTCGCGCCCGCCGCG GCGCGCTGCCCCTGCTGGGCG CCGC CGCCCTGCTGGGCCTG-GCCC TGTTCCCCGCCGGCG  56 82
        fliP NONE
        fliQ 3389692 .. 3389733 +  -7.3  -4.41494   TTCCCGGCCTGGTGT CGTAGCGGCGCGCGCCGCCG CACTC CGG-GACGCGC-CCGC-ATG TTTTCCTTCACCATC  78 21
        fliR 3390585 .. 3390600 + -11.8  -5.47218   GAGCGCATAAAAAAA              CGGCCC GCGC GGGCCG               TTTTTTTCGATGGCG 100 91
        flgA NONE
        flgM NONE
 IUJ48_15750 3411491 .. 3411510 +   -15  -4.05788   TGCTTCAAAAACAAA            CAGCCCGC ATCC GCGGGCTG             TTTGCTTTCGAGGCC  95 49
 IUJ48_15835 3431743 .. 3431757 +  -4.2  -4.59853   GACCTGCCGAAACCC               GGGC TCTTTCC GCCC               TTTTTCAAGCCTTCC  75 103
 IUJ48_15840 3433628 .. 3433641 +  -3.1   -4.2074   GCGGCCTAGCTGCCC               GGTTT GAAG AAGCC                TTTCTCTCTTGGGAG  64 182
 IUJ48_15845 3435715 .. 3435744 + -10.8  -5.00616   GGCTTCCAAGCGATC       GTG-GAAGGTGGC TTTTT GCCACCTTCTCGC       TTTTTTGAGACACGC 100 328
 IUJ48_15850 NONE
 IUJ48_15855 3437001 .. 3437029 + -14.5  -3.27525   AGGCATAAATCGCCC        TGGCGCGCGGCAA CGA TTGCCGCGCTCCC        TTCGCTTTGGCGCGC  83 33
 IUJ48_15885 NONE
 IUJ48_15890 NONE
        folD 3449104 .. 3449150 + -23.9  -2.69151   CCCGCCGTGGCACCC TTGTGGGTTTGCCCCG-CGCCC TTCC GGGGGACGGGGCAAACCCACAG TCGTCTCTGGGCGCG 100 56
 IUJ48_15900 3451376 .. 3451397 + -15.9  -5.47218   TTCGCGCATGATCCA           TGGCCCGCT TGCG AGCGGGCCA            TTTTTTTGGCTGGCC 100 45
 IUJ48_15910 3452992 .. 3453032 + -12.7  -2.70932   CCTCGTAGGGCGCCA TGCAACATTGCTGCACCG ACGACG CGGCGCAGC-ATGTTGCG  TGCTTGCCCCACACA  68 33
 IUJ48_15915 3453403 .. 3453428 + -20.5  -5.42862   CGCGCGCCATGCAAA         GCGGGCCGATC GAAA GATCGGCCCGC          TTTTTTTACCACTGT 100 50
 IUJ48_15935 3460750 .. 3460779 +  -2.1  -4.56702   CACCACCTTCAGGCC       CACCAG-TTCGC ACATGCG GCGGATCTGGCG       TTTCTTTCCTTCGCG  71 217
 IUJ48_15945 3462366 .. 3462392 +  -5.6  -2.71144   GTCAGCGCCACGCCA         AGCACCGCGCCG ATC TGGCGCGTGGCC         TGGTTGACCGCGCTG  43 265
 IUJ48_15995 3474038 .. 3474086 +   -11  -3.14931   GCGGAAGCGACACGA GG-C-GTTGCGCCGGGCGCGGCC ATTGCC GGCCGCACCCG-CGCGGCGGACC TTACTGGCCCATCGC  66 67
 IUJ48_16015 3479178 .. 3479204 +  -9.2  -2.79589   CCGATGGCGGCATCG         CGCGCGCCGCGC CGT GAGCCGCGCGCC         TCATATTGCTGTCAT  58 9
        gspG NONE
        gspH NONE
        gspI NONE
 IUJ48_16035 NONE
        gspK NONE
 IUJ48_16045 NONE
 IUJ48_16050 3483653 .. 3483667 +  -3.5  -3.21416   GACACTGGCCCTGCC              CG-GCC CGCA GGCGCG               TTCCTGATGCGCCTG  45 4
        gspN 3484747 .. 3484780 +  -2.9  -3.32498   ACACCCCTCTTTCGC     CCGGC-GCCGCGGCGC GCG GTCTCGCAACGGCCGG     TTCCTGTATCAACTG  47 343
 IUJ48_16065 3487415 .. 3487447 + -11.3  -3.18264   CATGCCGGCGGCGCT     GGCGGCG-CG-GCGC AGTTC GCGCTCGTCGCTGCC     TTCGTGGATCAAGCG  64 158
        gspF 3493134 .. 3493165 +   -10  -2.70932   ACGAAGATGACGAAG      GGGCAGTCCGGAGC GAAC GCTCCGGACCGCAA       TCGTTGGCGCCCGCA  59 431
        argH 3498919 .. 3498940 + -18.7  -5.18371   TTGCTCTAAAACAGG           CGGCCCCGG ATTT CCGGGGCCG            TTTTCTTTTGTGGCC 100 54
 IUJ48_16105 3501103 .. 3501161 + -12.4  -2.78596   TCGACGCGCGCCGCT AGCGAGCACGAACGCGGGCGTTCAAGGC CTGTT GCCTTGAACGCGCGTGC-CGCGC-CGCG TGTCCTGCACGCATC  65 24
 IUJ48_16145 3511026 .. 3511040 + -12.8  -5.24129   CGCAACACGAAAAAA               CCGGCC AGC GGCCGG               TTTTTTATCGAACCA 100 52
 IUJ48_16160 3514772 .. 3514800 + -26.1  -4.59773   CGCCCTGATGCGAAA        CGCCCCGGCAGGA ATC TCCTGCCGGGGCG        TTTTTCCACATCGGC 100 46
 IUJ48_16175 NONE
 IUJ48_16180 3519751 .. 3519779 +  -8.9  -4.86621   TTGAGCTTGCCCTGC        GGGCTGACG AAATCTTCCAG CGTCAGCCC        TTTTTCCTTGAGGAT 100 97
 IUJ48_16195 3523129 .. 3523162 +  -3.7  -3.66356   ACCACCCTTCTTGCG     ACGTC-GCGCCGGG ATAGCCG CCCGGCGCCGGCCC     TTTCCGCTTCACCCT  53 41
 IUJ48_16200 3524059 .. 3524069 +  -2.4  -3.64703   AGATAACGGCGCTTT                 CCCG GAT CGGA                 TTTCGATGGGACGCC  50 88
         xth 3524952 .. 3524982 +  -2.4  -2.60685   CGATTGAGCCAAAAA       TCTTGCGCACCG GCTTGCA CGGCGCGCGGAA       ATTCCTGTATAGTTG  38 34
 IUJ48_16210 3525107 .. 3525134 + -13.6  -5.72622   ATTCCAGATGAAAAA        GCCTTGGAAACAC AAT GTGTT-CCAAGGC        TTTTTTGTTTCTACA 100 43
 IUJ48_16230 3529887 .. 3529903 +  -5.8  -2.72344   CCGTGTGGTAGAAGC             GC-GGCG TGTC CGCCAGC              TCGTTGGCGGTGCGC  46 491
 IUJ48_16250 3533236 .. 3533262 +  -7.8  -3.02144   AACACGCCGCGCAAC         CGCTCGCGGGTG TTG CGCGCGCGGACG         TATTCCCAGCCCTGC  52 331
 IUJ48_16265 3536875 .. 3536915 +  -4.4  -3.72576   TCGGCCACCGGCCGC  ATGGCCAACCACCGGGCC CGATC GGCCCGGACGATCGCCGC  TTTCCTCACCCCCGC  56 56
 IUJ48_16275 3538633 .. 3538649 +  -4.3  -3.63464   GGTCTTGCTTGACGC              TGGCTCG CCC CGAACCG              TATTCTTATTTGAAC  53 185
 IUJ48_16280 3539293 .. 3539305 +  -4.7  -4.00543   GGCATACTGGACCGC                CTCGG CAC CCGCG                CTTTTTTTCGTTCTT  62 51
 IUJ48_16285 NONE
 IUJ48_16295 3542928 .. 3542942 +  -3.5  -3.66378   CGCCCTGGGGCGGGT               TCGGG TCGCC TCCGA               TTTGAATCAGCTATC  51 6
        hutG NONE
 IUJ48_16305 3545388 .. 3545402 +    -7  -2.82623   CGGCAATAGAGCATG               CCGGGC GAG GCCAGG               TCCTTGTAGACGGGC  50 495
        cydC NONE
 IUJ48_16330 3554916 .. 3554933 +  -2.6  -3.53811   AGATGGCGCCGGTCA             GCGCGA GCCAGA TCACGC              TTTCCAACGAATAGC  50 230
 IUJ48_16370 NONE
 IUJ48_16375 3563932 .. 3563945 +  -3.7  -4.67173   ATAGAATCTTCAATT               CGGGC CTGT GCCCA                TTCTTTTTTCCCTTC  75 164
 IUJ48_16380 3566107 .. 3566126 + -13.6  -5.95539   GGCAAGTAGGCAAAA            GGCCTGAC GCAA GTCAGGCC             TTTTTTTCTTTGCCG 100 32
 IUJ48_16390 3567548 .. 3567560 +  -3.3  -3.12327   GCCGCCGGGAAACGG                CGGCT CGG GGTCG                TATTCGATCTGCAGC  45 138
 IUJ48_16400 3569093 .. 3569120 +  -5.4  -2.79796   GACAAACCTTGCGCC        GGCGTTG-CCGCG GCG CGCGGACTGCCCC        TATCATCCCGTCCAG  45 56
 IUJ48_16405 3569783 .. 3569809 +   -10  -3.18023   ACTGGTCGAACAACT         CGGTGGCGATCG GCC CGGGCGCCACGG         TGTTGATCGTGATGC  60 268
 IUJ48_16420 NONE
 IUJ48_16425 NONE
 IUJ48_16430 3574918 .. 3574948 + -10.4  -3.01924   GCCGACGCGCGGCCG      GC-GGCGCACGCG CCAACC CGCGTTCGCCCGC       TGTTCCCGACCCATC  62 71
 IUJ48_16435 3576465 .. 3576477 + -10.5  -3.03771   CTGCGTTCAGCGCGA                GGCGG CGA CCGCC                TCTTCCAGCATCTCC  62 165
        tetR NONE
 IUJ48_16470 NONE
 IUJ48_16475 3583983 .. 3584034 + -10.6  -2.52896   AGCAACAGCTCGGCG CTCAGGCGCTGCACGGGCCCGTGG CGCG CCGCCGGCTGGTTCAGCGCCAGGA TCAGTTCGCGCATCA  55 430
 IUJ48_16485 3586721 .. 3586750 +  -4.3  -2.63901   CCGCCGGGAACGATC       GGTTAAGGTGT AGCCCCAC ACCCCTTGACC        CTTCATTCCTGGAGT  41 95
 IUJ48_16490 3588230 .. 3588243 +  -3.7  -3.31144   ACACCCGTACCCGCG               CCGAC ACCT GGCGG                TTCTGCGGATACAGC  47 90
 IUJ48_16500 3589929 .. 3589956 +  -7.6  -2.73994   GCCAACGGCGGCATC        GCCTGACGCGCCG ATC CGGCGCGG-ATGC        TACTGTTGCGCCCAT  51 20
 IUJ48_16505 3590709 .. 3590720 +  -7.2   -3.1506   GTCGTGGCGCTCGCG                CGGG CCGT CCCG                 TTCATGGGCAGATTT  51 60
 IUJ48_16510 NONE
 IUJ48_16515 3592802 .. 3592843 +  -5.5  -3.05463   GGGACGCGGCGGGCG CGTGCTTGCGCGTCCCGGG CCCT CCCGGGGCGCCCGCCCCCA  TTCCGTCGCGACCAT  49 47
 IUJ48_16520 3593840 .. 3593868 +  -8.7  -3.31144   GCCGGGCGTGAGGCG        GCGCCGGGCCG ATGCGCA CGGCGCGGCAC        TTATCCGGATACGGA  60 64
 IUJ48_16525 3595355 .. 3595384 +  -7.2  -3.18264   TGCCAATATTCCACC      GCGC-GGT-GGATG TCGG CATCCTGCCTGCGC       TTGCTGCCTCCGGCC  53 402
 IUJ48_16545 3599505 .. 3599517 +  -9.1  -3.16564   GACGCCGCGCACGAA                GCTGG CGT CCAGC                TTGATCGCGTCCAGC  56 287
 IUJ48_16560 NONE
 IUJ48_16565 3605408 .. 3605455 +  -5.5  -3.62096   CGGCCACCGGGCCGA TCAGCGGCCGCTGCACGATGCCGT TCT GCGCCACCGCGC--CGGCCGC-GA TTTCCGGTAATGCCG  54 164
 IUJ48_16575 NONE
 IUJ48_16580 3608283 .. 3608308 +  -7.5  -3.11619   CGATCCGTTCGCGGT         CGCGGGTCCCGG GGG CTGGG-TTCGCG         TTCAGTCGCTTATTG  55 124
        napE NONE
 IUJ48_16590 NONE
        napA NONE
 IUJ48_16600 NONE
 IUJ48_16605 NONE
        ccmA NONE
        ccmB NONE
        ccsA NONE
        ccmD NONE
        ccmE NONE
 IUJ48_16635 NONE
 IUJ48_16640 3617919 .. 3617969 + -11.8  -2.70932   CCGCCTCGATCTCCC G-GCAA-GACCGGCGGCCGGGCCG CGGGA CGCCCTGGCCGCCGCCCGTTGCGC TGGTTGGCCGCGCCC  65 76
 IUJ48_16645 NONE
        ccmI 3619990 .. 3620007 +  -6.9  -3.12668   CTTGCCATCGACCAG             GTGGGCG CGCG CGCCCAG              TTCGGTGTGGCCATA  50 256
        ccmA NONE
        ccmB NONE
        ccsA NONE
        ccmD NONE
        ccmE NONE
 IUJ48_16715 NONE
 IUJ48_16720 NONE
 IUJ48_16725 3635853 .. 3635876 +    -3  -3.37796   TCCGTCCGCTGCCGG          CGGGGAGCGCG CTC CGTGA-CCCTG          TTCTGGCTCCTCGCG  47 7
        ccmI 3636958 .. 3636968 +  -2.4  -4.30719   GTCAACGCCTCGCGC                 CAGG CGG CCAG                 TTTCTTCTCGAACGA  65 174
 IUJ48_16740 3638624 .. 3638651 + -17.8  -5.01811   CCGGTCCTGAATGGA        GCCGCGTTTCCT GTTG GGGAAACGCGGC         TTTTTGCTTTGATCG 100 64
 IUJ48_16750 3641458 .. 3641468 +  -3.2  -3.14132   GTTGCTCTTCACCCG                 GTGT GGC ACGC                 TTGATCACACGGGCC  43 60
 IUJ48_16755 NONE
 IUJ48_16760 3644659 .. 3644673 +  -2.1  -3.17075   CTTGAGCGTCTTATC              GCCGCT GACA AG-GGC               TTCCATTGAGACAGG  42 2
 IUJ48_16765 3647162 .. 3647176 +  -3.5   -3.1706   AGTGCGCCCTATGTC              CCG-CG CGAA CGTCGG               TTGATAGCATGGATT  43 301
 IUJ48_16770 3647829 .. 3647853 +  -7.1   -3.1886   CCCCAGGGCGGCTTT          CGGGTCGCA CGAGTTC TGTGGCCCG          TTGCTCGCCTTCAAT  54 44
 IUJ48_16775 3648635 .. 3648649 +  -3.4  -4.84761   AAAACGAGCAGGTGC               GAGCGC TTG GTGCAC               TTTTTCTGCGCCTGT  78 50
 IUJ48_16780 3651358 .. 3651381 +  -9.5  -4.56597   CTTCATTAGCTTGTT          GCTGGCGTG CGTTAC CACGCCTGC           TTTTTCGCAACAGAC  86 115
 IUJ48_16785 3652436 .. 3652447 +  -7.2  -3.29704   GAATAGAGTATGGAG                GGCG CTCG CGCC                 TATATTTGATCGCAG  54 35
 IUJ48_16790 3653725 .. 3653739 +  -7.8  -3.53091   GACTGGGCAACACGC               CGGTGT TGC GCACCG               TTTCGAGGAACCCGT  60 405
 IUJ48_16805 3655529 .. 3655541 +  -4.7  -2.64218   AGGCCATGGCGCACT                GCTGC CTG GCCGC                CTTCTGATGCGCGAT  43 6
 IUJ48_16810 3656720 .. 3656743 +  -4.4  -3.04322   AACGCGAACCGAACC          GGTGCCGCGT CTGG ACGCGCCGCA           TGTTCAACCCTTCCA  44 186
 IUJ48_16815 3659634 .. 3659655 +  -8.7  -2.62616   CAATCTTTGCACTTT           CGAGGGC-CG TCG CGTGTCCTCG           TAGTGTGGACACTGA  53 101
 IUJ48_16820 3660795 .. 3660821 + -17.4  -4.23758   GGCCTCGCCCATCAC         GGACTGCAAGGG TTC TCCTTGCAGTCC         TTTTGCCTATCCACT 100 132
 IUJ48_16825 3662874 .. 3662893 +  -6.4  -3.10579   CATTCCCGGACAGGA            TG-GGCGCG CCG CGCGTCGCA            TAGTTGTTTTCGAAG  48 524
 IUJ48_16835 3664633 .. 3664654 + -11.7  -4.11394   CGCGTACGCCCCTGC           CAACGCTTT CCAA AAAGCGTTG            TTTTCGACATCAAAT  81 49
 IUJ48_16840 NONE
 IUJ48_16845 NONE
 IUJ48_16850 3667637 .. 3667651 +    -7  -2.52623   GAACCTGCGTCCGGG               GCGCCG CAC CGCCGC               ATGTTCTCCGCCGGC  48 147
 IUJ48_16860 NONE
 IUJ48_16865 3669479 .. 3669501 +  -4.9  -4.59773   CTCTGAGCGCAGGCG          TCGCCCATTG GCGC CGAT-GGCGA           TTTTTCGCAGTCCCC  77 35
 IUJ48_16870 3671127 .. 3671153 +  -5.1  -3.76224   GCTTGCCCGCCAGCT        CTCC-CCTGAAC TGGA GTTCGGGTGGCG         TTTCCTGGGTGGCCA  58 385
 IUJ48_16925 3683327 .. 3683358 +  -5.1  -3.78934   TGTGCTGGGTGTAGA      CCTCGCGCGCCATC AGGAA GGTGCCGTGC-AGG      TTGTTCTGCACCACC  58 459
 IUJ48_16935 NONE
 IUJ48_16940 NONE
 IUJ48_16945 NONE
 IUJ48_16950 NONE
 IUJ48_16955 3688828 .. 3688863 + -18.2  -3.40403   CCTGAATTGCGCGGA    TCGGCGCGCGGGCTGG CACG CCGGCCGGTGCGCCGG     TTGTGGTCCGGGGCA  93 36
 IUJ48_16970 NONE
 IUJ48_16980 3694209 .. 3694235 + -11.4  -2.52464   CCGGCCGTCAAAGGA         TGCCGGCCCCGG GGA CCGGCGACGGCG         TCAATTCGCGACCGG  61 78
 IUJ48_17020 NONE
 IUJ48_17025 3705849 .. 3705878 +  -9.2  -2.59981   GAGCTGGTCCAGCCC       GTACTGGCGCAG ACGATC CAGCGCCAGCAC        CTTGATCTGGTTGTA  55 53
 IUJ48_17035 NONE
 IUJ48_17040 3710225 .. 3710240 + -10.4  -5.14563   GCTTCCTTTCTGAAA              GACCGC CACG GCGGTC               TTTTTTCATGGAACA 100 72
 IUJ48_17045 NONE
 IUJ48_17050 NONE
 IUJ48_17055 NONE
 IUJ48_17065 3714800 .. 3714838 + -13.7  -3.40775   CGTCGGCGGCGACCG  CGCCTAGCCC-GGCGCCC TATT GCGCGCCTGGGCGCGGCG   TCTTTGAATGCCGCT  80 19
 IUJ48_17090 3719537 .. 3719552 + -10.4  -3.01712   GCTCCAGTCGCGCAC              CACGCC GCGC GGCGTG               TCTTCCAGCCACCCC  62 312
 IUJ48_17135 NONE
 IUJ48_17140 NONE
 IUJ48_17145 NONE
 IUJ48_17150 NONE
 IUJ48_17155 NONE
 IUJ48_17160 NONE
 IUJ48_17165 NONE
 IUJ48_17170 NONE
 IUJ48_17175 NONE
 IUJ48_17180 3736306 .. 3736326 +  -3.8  -3.53012   CGCGGCGGGTACACT            GGGCACGC CGACC GCGCCCCC            TTTGCCGGCGCCCGC  51 92
 IUJ48_17185 NONE
 IUJ48_17190 NONE
 IUJ48_17195 NONE
        fabG NONE
 IUJ48_17205 NONE
 IUJ48_17210 3741232 .. 3741288 +  -7.9   -3.2794   GGCAGGTCGACCCGC TCGCACAGCAGCCGGGCCATGGTCGCC AGCTC GGCGGCCGAGGCC-GGCGGAT-TGGGA TTGGTCTGGCTGCGC  55 143
 IUJ48_17220 3743233 .. 3743245 +  -6.2  -3.30124   CTTGAATTCGCTGTG                CGGC GACGA GCCG                TTCTGCGAAATACCC  52 463
 IUJ48_17230 3745404 .. 3745422 + -13.1  -3.13403   AAGCTTGGCGGGTTC             GGCGGCC TCGGC GGCCGCC             TCTTCCTCCCGGGCC  72 39
        pgaA NONE
        pgaB NONE
        pgaC NONE
        pgaD 3753988 .. 3754008 +  -3.9  -2.61582   CAGGTACAACTGCGC            CTCGCGC ACCGACA GCGCGAA            CTTGTCGATCAGGTA  40 518
 IUJ48_17265 3755789 .. 3755799 +  -8.2  -3.85698   CATGACACCTGCAAC                 CGGC CTT GCCG                 TTTGTCACGGCGCGC  69 36
 IUJ48_17270 3758751 .. 3758772 + -18.7  -4.20136   GCACCGCAATGCAGA           CGGGGCGCC CATG GGCGCCCCG            TTTCATTTTCCCGCT 100 98
 IUJ48_17280 NONE
 IUJ48_17285 3761134 .. 3761158 + -14.2   -2.7186   CCCTGGGCACGCCGG          CGGCGCCCGC CGCTC GCGGGCGCCC          TACTTGCCGAACTTT  71 75
 IUJ48_17295 NONE
 IUJ48_17300 3764712 .. 3764734 +  -2.7  -3.50853   GCGACTTCTTCGACC          CGCAGAACAC CAGC GTGATCT-CG           TTCTCCTTGGACAGC  47 218
 IUJ48_17310 3766524 .. 3766552 + -10.3  -2.71681   CCCGTGACCGCGTGT       GCCGCACGCTGC CTTCCA GCGGC-TGCGGC        TGCTTGAGCAGGTTC  59 88
 IUJ48_17355 3775070 .. 3775090 +  -6.7  -3.53224   CGGCGCCACCCTATA            TCGACGCCC TCA GGGCGCCAA            TTTGAAGCCCAGGTC  57 106
 IUJ48_17385 3779088 .. 3779119 +  -7.8  -2.52933   CAGCCCCACAATGAA      AAGCGTCCGGCCCCG GAG CGAGGCCGG-CGCCC      CTTCATCGCTTAGCA  50 80
 IUJ48_17390 3779402 .. 3779423 + -18.7  -4.10744   CTTCTCAACGCAAAA           CGCCGCGGC CTGC GCCGCGGCG            TTCTTGTTTGCGTCG 100 48
 IUJ48_17410 NONE
 IUJ48_17415 3784040 .. 3784056 +  -5.8  -2.70932   CACGGCGCTGATGGG             CC-GGCG ACAC CGCCAGG              TAGTTGACCCAGCCG  46 306
 IUJ48_17435 NONE
 IUJ48_17440 NONE
 IUJ48_17445 NONE
 IUJ48_17450 3789269 .. 3789279 +  -3.2  -3.33483   CCTCGCCGACGAATC                 CCAT GAA GTGG                 TTGCTGATTTCCCTG  47 303
 IUJ48_17455 3789548 .. 3789564 +    -3  -5.55698   TGGAACGAAACTTTA             CC-GATG CGCT CATCTGG              TTTTTTTGCCTTCTC 100 144
 IUJ48_17460 3790125 .. 3790162 +  -9.9  -2.50016   TGCGCCCGGAAATGA   GAAAGGGGGTTAGTGAT TTTC ATCACTAACCCCCTAGG    GTATTGCTGGTCGGG  55 74
 IUJ48_17515 NONE
         amt 3800745 .. 3800764 + -10.7  -5.52384   GCGGAGCCACGGGAA            GCCCCCT CTTTGC AGGGGGC             TTTTTTTCGTCCGGG 100 64
 IUJ48_17560 3809889 .. 3809905 +  -6.5  -3.39803   TGGCGGCGTAGTATT              CGTCGAG GTC CTTGGCG              TTCTGGCTGTAGGTA  55 421
 IUJ48_17570 3811595 .. 3811610 + -11.8  -3.21912   TGGCGCGAAGCCATC              GGGCCG CGTC CGGCCC               TTGCTCAATTCCAGG  64 219
 IUJ48_17580 3814037 .. 3814056 + -10.6  -2.53876   TTCGCTCGCCATCCC            GCCGGCGC CGCC GCGCCGCC             TGCCTTGCCATGAAA  58 43
 IUJ48_17585 NONE
 IUJ48_17590 NONE
 IUJ48_17595 3818641 .. 3818655 +  -5.6  -2.87564   CGTCTGTCGCCGCAT               TGGTGC GCG GCGCCG               TCTCTGCACCCATAC  47 59
 IUJ48_17600 NONE
 IUJ48_17605 NONE
 IUJ48_17610 NONE
 IUJ48_17615 NONE
 IUJ48_17620 NONE
 IUJ48_17625 NONE
 IUJ48_17630 3826533 .. 3826549 +  -7.9  -2.70932   CGCACTGGAACACCG              CGCCCTG CGC CAGGTCG              TCATTGCAGAAGAAC  49 274
 IUJ48_17640 NONE
 IUJ48_17645 NONE
 IUJ48_17650 NONE
 IUJ48_17655 3832331 .. 3832358 +  -6.8  -4.55798   CCGGCCTCAGCGACC        GGCCGCCGGGCC GCTC GGCTCGTCGGTG         TTTTCCTTTGAGATA  79 130
 IUJ48_17665 3833117 .. 3833139 +  -2.5  -3.14132   GATGCGGGCCCATCG           AACGCGCGG CGCCC CTGCGCGCA           TTCGTGCCGGGACGC  42 89
 IUJ48_17670 3833909 .. 3833937 +  -8.8  -4.07618   AATCATTCGCCAACT       TG-C-GGCCGGCGG ATA CCGCCGGCCAGACC       TTTGGTTCTTCCCGG  72 168
 IUJ48_17675 3834670 .. 3834709 +  -4.3  -3.25719   GACCTTCATCCGGTT GCCGCAT-AGCGCCATGCTG CAC CAGC--GGCGCCGATGCGAC TTGGTCCTGTCATGG  47 421
 IUJ48_17690 3836672 .. 3836684 +  -4.1  -2.72461   CTGTGCCTTGATGGA                TGTGA ACC TCACG                ATTTCGAGGCCATTG  40 460
 IUJ48_17745 NONE
 IUJ48_17750 NONE
 IUJ48_17755 NONE
 IUJ48_17760 NONE
 IUJ48_17765 3854094 .. 3854104 +  -2.4   -2.6927   CAATACCGCCGCGCG                 GCGG CCC CCTC                 TAGTATCTAGGCCAT  38 56
 IUJ48_17770 3864096 .. 3864121 +  -5.9  -5.42862   GATGACAAGGTATGG         CGACGCGGCGC GCAG GCGGCGCGGGG          TTTTTTTCCGGATAT  93 82
 IUJ48_17775 NONE
 IUJ48_17780 3867215 .. 3867239 +  -2.7  -3.76224   GCGCGCGCCGCCAGC          TCGACGCCCAT GCG GTCGGCCTCGG          TTTCATGCGTGCGGC  53 383
 IUJ48_17800 3873015 .. 3873071 + -15.7  -4.36914   GGTCGCGCCAGCGCC GCGCGCCGCGC-GCCCGTCCGGCCGG ATCCGC CTGGCCGGAATGGCTGGGCGCCGTGC TTTTCTGGCCAGGCA 100 71
 IUJ48_17805 3874776 .. 3874790 +  -3.5  -3.57144   ACGACCAGGAGGTGT              CG-GCG GCCG CGCGCG               TTTCAGCATCGACCG  51 297
 IUJ48_17825 NONE
 IUJ48_17830 3879159 .. 3879188 + -24.3  -4.74103   GGATATGCGCAAAAA       CGCCCGGGCGGCC TCGC GGCCGTCCGGGCG        TTTTTGCGTTCAAGC 100 87
 IUJ48_17840 3881878 .. 3881898 +  -5.3  -4.12456   AACCCATCCTGATGG            CGATGCGCG CGC CGCTCATCA            TTTTCACGATCGTCT  66 511
 IUJ48_17895 3892768 .. 3892779 +  -5.8  -3.06815   CCCCACGATGAAGCG                GCAG ACGG CTGC                 TCTGTTCCACGCGGT  49 30
 IUJ48_17900 NONE
 IUJ48_18010 3921303 .. 3921323 +   -14  -5.40072   GCGTTCATGCAAAGG            GCCCCGGA TCCTC TCCGGGGC            TTTTTTTCGCGCGGC 100 53
 IUJ48_18055 3928748 .. 3928771 +   -11   -4.7497   GATCGCCAACAAAAA          GGCCAGCC CGGGGAGA GGCTGGCC           TTTTTCATGAGTCGC 100 49
        sugE 3937519 .. 3937554 +  -8.2  -2.93348   TGCACGGCTTGACGA    ACGCCATGCTGACCGC GCCC GTGGTGATCATGGCGG     TATGGTCTTCCTCGA  53 274
 IUJ48_18130 3943459 .. 3943477 +  -5.9  -2.70932   CGCCGCGGGGCGGCC             GCGACCG CGCTC CGGTCCC             TGATTGAACGCGCCC  46 0
 IUJ48_18135 NONE
        trxA 3952546 .. 3952572 +   -15  -3.05384   TGCGTGCTGTGAACG         AACGCGCCGCCC TGG GGGCGGCGCGCA         TTCAATACCGCGCGA  80 43
         rho 3953939 .. 3953979 + -17.8  -4.61633   CCGGGCGCACGCATC G-ATTTGGCGAGGATTGCC CCAC GGCGGTCCTCGCCAAATGC  TTTTTGGGGGTCTGT 100 59
        glnE 3960571 .. 3960595 +    -5  -2.72855   CCGTCACGGCAACTC          GGCGTAAAAT AAGGG GTTTTCCGCC          TCATTGCCCGCTTTG  44 81
 IUJ48_18185 3961343 .. 3961361 + -13.8  -3.01712   GTCCGGCTCGTCCGT             CCGGCGTC CCT GGCGCCGG             TATTCCGACGGCGAC  75 80
 IUJ48_18240 NONE
 IUJ48_18245 3972144 .. 3972158 +  -7.1  -4.88918   GCCGGCACCGCCCCA               CCCCT GTAAA AGGGG               TTTTATTTGACGTAA  86 49
 IUJ48_18250 NONE
 IUJ48_18255 3975019 .. 3975073 +  -7.1  -3.14051   CCGCCGGGCACCTAC CCGCCGCTGG-AGGGCG--CCACCCG CATCAT CGGGTCGATCGCCCTATCCACGGCGG TGTTCATGAACGTGC  51 110
 IUJ48_18260 3976600 .. 3976617 + -14.1  -5.57054   AACACGCGAAAAAAA             GCCCGGC GAGC GCCGGGC              TTTTTTTCAATTCTT 100 59
 IUJ48_18280 3981321 .. 3981353 + -16.4  -2.70946   TCCCCGCGCCCCGCT     GTCACCGGATCCGGG CCCG CCCGGATCC-GTGGC      CTATTTCTCGGGCAG  81 113
        purD NONE
        hemF 3983621 .. 3983669 +  -3.8  -3.53811   GAACTGGCCGCCTAC CTGACGCCGCGGGA-CTGGGTGTG AAG CGTATCGGGCTCCTG-GGCGGCAG TTTCGACCCCGTCCA  51 2
        nadD 3984276 .. 3984287 +  -7.2  -3.82202   AACCGGCTCCCACCG                CCCG TCAG CGGG                 TTATATTTGCAGCTA  64 73
        rsfS NONE
        rlmH NONE
         maf 3985869 .. 3985897 + -17.4    -5.252   GGCAACATGAAAAAA        GCCCCCGGGACC TTGGC GATCCCGGGGGC        TTTTTTGTAGCGATC 100 48
 IUJ48_18320 3989476 .. 3989494 +  -4.4  -3.28041   GCGCAAGTCGCCGCC             CGCCGATC CAT GACCCGCG             TTCCTGATTCCCCTT  47 13
 IUJ48_18325 3991013 .. 3991040 + -24.2  -4.17048   GGGATCAAGTAAAAA        CCCCCGTGCGGC GCCA GCCGCACGGGGG         TTCTTTTGGGGCAAA 100 63
         rng 3999199 .. 3999220 + -14.5  -4.00042   TGATCTGTGATGCCG           GAAAGCCGC GACA GCGGCTTTC            TTCTTTCATGGCGAC  95 77
 IUJ48_18360 4000204 .. 4000231 + -13.4  -5.08601   TCGCTGGCATCTCGA        CGGGACGGTCCT TGCA ACGGCCGTCCCG         TTTTTCTTGGCGTCC 100 46
 IUJ48_18385 NONE
 IUJ48_18390 NONE
 IUJ48_18395 4008174 .. 4008191 + -12.7  -6.15828   CATTGAAAGCGAAAA             CGGGACC TTGC GGTCCCG              TTTTTTTTTGCTGGC 100 35
        lpxO 4018706 .. 4018724 +  -4.5  -3.45023   GTGGGCCAGCAGCTG            GC-GGCCG AAGA TGGCCTGC             TTCTGGTCCTGGTCG  52 329
        argA NONE
 IUJ48_18460 4027542 .. 4027569 + -21.4   -2.8294   GCGCGGCCCCTCCTG        CGAAGCCCCTCG TCCG CGAGGGGCTTCG         TGCTTCTGGCCGGTC 100 57
 IUJ48_18465 4029620 .. 4029644 + -13.6  -5.00616   GGACACGTAAAAAAA         CCCCAGCGCGC CGTG GCGC-CTGGGG          TTTTTTGCCGCCGGG 100 47
 IUJ48_18495 4037156 .. 4037196 + -16.7  -2.70932   CCAGGGCTGAAGGCC  GCGGCCCTGAGGCAAGCGC GCC GCGCCCGCCTCAGGGCGCC  TGCTTGAGCGGCGCC  81 31
 IUJ48_18545 NONE
 IUJ48_18550 NONE
 IUJ48_18555 4049160 .. 4049184 + -20.1  -2.90496   AGCAAGCCTGAAAGA          CAAAGCGCCCG ATT CGGGCGCTTTG          TGGTTTCGGCAAGCC 100 108
 IUJ48_18565 NONE
        argF 4051835 .. 4051852 + -12.7  -6.22802   GCGCCCGTGAAAAAA             GCAGCCC CGTG GGGCTGC              TTTTTTTTTATCCGC 100 46
 IUJ48_18600 NONE
        argG 4058324 .. 4058346 + -16.3   -5.7946   CCCGCCCAACAAAAA           GCCCCTCGG CAACA CCGAGGGGC           TTTTTTTGTTCAACA 100 46
 IUJ48_18670 4071907 .. 4071932 + -14.1  -4.99134   CAAAAAAGTTGAAAA         CCCCGGAAATC GTGA GATTTTCGGGG          TTTTTGCTTTGAGCT 100 112
 IUJ48_18680 4073030 .. 4073053 +  -9.4  -5.79595   ATGCGCCAAGAAAAA          CCCCGTTCGC GAAA GCGTCCGGGG           TTTTTTCTTTTGCGG 100 69
 IUJ48_18690 4074594 .. 4074613 +  -4.9  -3.85698   GCGCGGCAAGTAGAA            TGAGCGC CCTTTC GCGCCCA             TTTCTCCCGCCGCCA  60 23
 IUJ48_18695 4075672 .. 4075691 + -12.8  -4.27062   TGGACACCACGATGA            CGGGTGCG GCGA CGCGCCCG             TTTGCTTTTCCTTCG  95 125
 IUJ48_18700 4076987 .. 4077004 + -12.7  -5.08824   ACTGTTCCAGCAACG             GCCCCCT GACC AGGGGGC              TTTTTTACGTCCGCG 100 46
 IUJ48_18705 4079084 .. 4079099 +  -2.5  -3.05844   ACCGTGGACCAGACA              CCGTCG ACCAC CG-CGG              TCTTGGCGTGCAGCA  41 283
        egtD NONE
 IUJ48_18725 NONE
 IUJ48_18730 4083610 .. 4083631 + -15.9  -5.71295   AAGAATTCAAAGCAA           GGCCCGCAA GCAA TTGCGGGCC            TTTTTGTTTTTGTGT 100 41
 IUJ48_18750 4086146 .. 4086172 +  -5.1  -2.66695   GGCGCCGCCGCCGAA        GGC--CAGCGCGG GTT CCGCGCTCATGCC        GTATTTAATCCACAG  42 311
 IUJ48_18760 4087411 .. 4087423 +  -3.3  -3.53343   TGGATATTGGGATAC                GGCTG CGA CAGGC                TTTCGACCAGGGCTT  49 217
 IUJ48_18785 4091795 .. 4091825 + -10.3  -4.07568   GATAGTCATCGACCA       TGGCCCAGGCATC GCCCA GGCGCCGGGGCCA       TTTTCCGGCCGGAGG  75 204
 IUJ48_18865 NONE
 IUJ48_18870 4107152 .. 4107177 + -10.3  -4.64676   CGCGTTGCGCGGGCC         GCAGGCGGCGG CCTG CCGCAGCCTAC          TTTTCTTCCAGGTCC  91 77
 IUJ48_18895 4110946 .. 4110961 +  -3.2  -3.53761   CTATTGGAATTTGCC              GTTTGG CACT CCAGGC               TTTGCCGCCGCCTTG  49 205
 IUJ48_18900 4111909 .. 4111932 +   -16  -2.76711   TAATCTGGCGCAAAA          CCGCCATGGC CCAC GCCGTGGCGG           CTTCATTTGTGCGTG  78 59
 IUJ48_18905 4112747 .. 4112764 + -12.7  -4.65895   CGCACCAATGGAAAA             GCCCCTC GGTC GAGGGGC              TTTTTACATGCGGCG 100 95
 IUJ48_18920 4115497 .. 4115517 + -15.4  -3.75629   TCGTCCCGCACCGTT            CCGGCCGC CTTGC GCGGCCGG            TTTCACTTGCGGCTC  90 53
 IUJ48_18940 NONE
 IUJ48_18945 4120731 .. 4120754 + -13.9  -5.07652   GGCGCGAGCCCCAAA          GCCCCATGG TTAACC CCATGGGGC           TTTTCTTTTGCGCCC 100 105
 IUJ48_18950 NONE
 IUJ48_18955 NONE
 IUJ48_18960 4123850 .. 4123873 + -10.2  -3.57144   CCACTTCGATCCAGT          GCCGCACCGG CGTG CTGGTGCCGC           TTTGCAAGTGCCCGA  67 162
 IUJ48_18995 4133435 .. 4133455 + -16.9  -5.79595   AGTAAGAAAAATAAA            GGCGCACCA AAA TGGTGCGCC            TTTTTTATTTTCGAA 100 53
        pepN NONE
 IUJ48_19010 4138045 .. 4138064 + -16.4  -5.14965   GCGGCCAAACGAAAA            GCCCCGGC CTGA GCCGGGGC             TTTTTTCATCCAGAT 100 50
 IUJ48_19035 NONE
 IUJ48_19040 NONE
 IUJ48_19045 4145771 .. 4145792 + -14.5  -5.24129   GTCTCCAAAGAAAAA           GCCCCTTGA GCGA TCAAGGGGC            TTTTTTATCACCGGG 100 107
 IUJ48_19085 NONE
 IUJ48_19090 NONE
 IUJ48_19095 NONE
 IUJ48_19100 4154726 .. 4154745 + -12.2  -3.31144   ACCGGCGCGGCGTGG            CAAGGCCT GATC AGGCCTTG             TTGTAGCGCTCGGCG  73 16
 IUJ48_19165 4172297 .. 4172316 +  -4.8  -3.59979   TGCGCGAAGCCGCGG            CTGGCCAG GAAG CGGGCCTG             TTTGGCATAGGCGGC  54 130
 IUJ48_19180 4175264 .. 4175282 + -11.6  -3.53012   TGGATGTGATGCAGG             CCGGGGCC CGC GGCCCCAG             TTTCGCGCCACCGCA  72 76
 IUJ48_19185 NONE
 IUJ48_19190 4178742 .. 4178755 +  -8.1  -6.06723   CCCGGCCTTTCAAAA               GCTCC CCTG GGAGC                TTTTTTTTTGCGCCG 100 76
 IUJ48_19200 4180403 .. 4180425 + -12.7  -4.72272   AGCCTCGCCGACACA           GGCCGCCTT CGCAA GAGGCGGCC           TTTTTCATCGCCGAG 100 49
 IUJ48_19230 NONE
 IUJ48_19235 4186055 .. 4186071 +    -5  -3.06796   AGATCGAGCAGCGCC              ACGGCC TGCCC GGCCGC              TTCGATCCGGTCGCG  46 465
 IUJ48_19260 NONE
 IUJ48_19265 4190706 .. 4190736 +  -5.9  -3.75461   TGCCGGCCTGCGTCA       GGCGCCGCTCGTG GGCGA CTCTGGCGCCGCC       TTTGATCGCACTTTG  60 381
 IUJ48_19280 4191862 .. 4191874 +  -4.7  -2.94099   CATGCATTGACTTGC                GCCGC GCC GCGCC                TGTATGGTCGGGCGC  46 43
 IUJ48_19285 4192366 .. 4192393 +  -7.6  -4.22949   GCGCGCTGACCGGGC        CGCCGGCAGCCGC CAC GCGA-TGCCGGCC        TTTCTCTGTATTGTG  75 43
 IUJ48_19290 NONE
        pdxA 4193831 .. 4193843 +  -4.7  -4.26903   TCCGGCGCCCGTCGC                GCGCC GCC GCCGC                TTTTCCTCCCCTCCC  68 76
 IUJ48_19300 4194867 .. 4194882 + -11.8  -5.75342   GCCCGCATGAAAAAA              CCGCGC CCGG GCGCGG               TTTTTTTTGGGGCCG 100 49
 IUJ48_19365 4206193 .. 4206219 + -13.7  -4.72272   CAGGGCGCCCCTAGA         CCGACAGCGCC CGCGC GGCCCTGTCGG         TTTTTCATGCGCAAC 100 101
 IUJ48_19370 4207477 .. 4207491 +  -2.8  -5.06414   TGACGGCTTACTTGA               TCGG CCAGACA CCGA               TTTTTCTTCGCGCCA  81 157
 IUJ48_19375 4208949 .. 4208968 +   -15  -4.85782   TCCGCCAACGCAAAA            GGGCTCGC GATC GCGAGCCC             TTTCTTTTTGCCGGG 100 49
 IUJ48_19405 4216109 .. 4216142 +  -8.1  -3.09492   TCTGGAGATGGCGCC     GGCAGCCGGCTGATCC CAG GGATCA-CTGCCCGCC     TCTTCCCCTTGCGGC  55 13
 IUJ48_19410 4216753 .. 4216779 + -15.9   -3.5394   TGGTAAGACCGCCAC        CCGCGCCGTCGG AATA CC-ACGGCGCGG         TTTCAGGCCCGGTTT  90 35
        htpX 4219700 .. 4219721 + -14.5  -5.27335   CGGCAATGAAAAAAA           GCCCCTTGA GCGA TCAAGGGGC            TTTTTGTTTGGGGCG 100 130
 IUJ48_19435 4223067 .. 4223083 + -15.1  -3.14132   GCCGGCCCCCACGCC              GCGCGCG CTT CGCGCGC              TTGCTGCCCCCCGAG  80 119
 IUJ48_19455 4229073 .. 4229115 +   -16  -2.72344   CCGGGAAAGACGCCC GGCAATACCGGGCGGCCGCG GAT CGCGGCCGCCCGCCTGCGCC TACTTGCGCATGAAC  78 51
 IUJ48_19470 4233130 .. 4233163 +  -7.3  -4.32034   ATGCCGACATCGACT     TCGCCGCGTTCGTAGG CGG CCT-CGATCGCGCCGC     TTTTCATGATGGTGA  76 484
 IUJ48_19480 4234162 .. 4234187 + -18.3  -3.66178   CCACGAATGAAAAAA         GCCGCGCACCC CGAA GGGTGTGCGGC          TTTCCGATTGCCAGG  93 137
 IUJ48_19525 NONE
 IUJ48_19530 4246371 .. 4246392 + -10.1  -3.53224   TAACAACCCCATGAG           CCGCGTACC CATC GCTACGCGG            TTTCGCGGGCGGGTC  69 38
 IUJ48_19555 4250998 .. 4251015 + -12.7  -5.37593   ACCAGAATTCAAAAA             GCAGCCC GACC GGGCTGC              TTTTTTCATTTCCGG 100 37
 IUJ48_19560 NONE
 IUJ48_19565 NONE
 IUJ48_19570 4254661 .. 4254692 + -14.5  -3.15544   GTGCAGCTCGGCTAA     GGCTGGCGGGGCCCC TCGC GGGG-C-CGCCAGCC      TTACTCCGCGTCGGG  80 26
        radC 4257583 .. 4257599 +  -2.1  -3.35813   CCGCATCTGAGGGGC              TGCGCGC GCC GCGGGAA              TTCGTTAGACTACGG  45 31
        kynB NONE
        kynA 4259398 .. 4259417 + -10.7  -3.05384   GTCCCTGAATGGGCA            TCCGGGC AGGTCC GCCCGGA             TTGCCTGGCCCGCCC  63 55
 IUJ48_19605 4259854 .. 4259869 + -10.4  -5.78622   AGTCACAGCAAAAAG              GCAGCC TCCG GGCTGC               TTTTTTTTCCCCTGG 100 59
 IUJ48_19610 NONE
 IUJ48_19615 4263116 .. 4263131 + -10.4  -5.14965   CGGCGCAAAAAAAAA              GCAGCC CGAG GGCTGC               TTTTTTCATGGCGGT 100 63
        paaX 4272457 .. 4272475 +  -7.3  -3.30441   AGCGCCCTGGGCCGA             GGGGCCG CGGAA CAGCCCC             TTCTCAGGCGTCGTC  58 39
 IUJ48_19680 NONE
        rsgA 4276324 .. 4276335 +  -7.2  -3.78953   CCTCGACGTGGTTGG                CCGG CAGT CCGG                 TTTCCTCCTGCGCCT  64 374
 IUJ48_19700 4278614 .. 4278632 +    -3  -3.53012   ACGCGCCAGCTTCGG             CGGCCG GGGGGAA CGGCCA             TTTGCCAGGCAGGGC  47 285
        mltB 4300354 .. 4300391 +  -8.4  -3.12351   TGCAGGGTGTGGTGA   TCCGGCTG-GCGCTGCT TCTCC AGCAGCGCATCGCCGAA   TTCCGTGTGGAACAG  56 466
 IUJ48_19795 NONE
 IUJ48_19800 4302939 .. 4302975 + -25.2  -4.72272   ACCTCGCAACGCAAA    CGCCCCACGTCCCGGA CGGTT TCCGGGTCGTGGGGCG    TTTTTCCTCGGCGGA 100 73
 IUJ48_19880 4320770 .. 4320790 + -18.3  -5.44119   ACTAGCTACAATAAA            GGGCCTCGC ATA GCGAGGCCC            TTTTTTTCGCCTGGC 100 48
        ubiG NONE
 IUJ48_19890 4322508 .. 4322533 +  -8.2  -4.05714   CCGGCCAATGCCGGA         TGCCGCGTGG CAACGC CCGCACGGCA          TTTCTCGTTACGCAT  72 240
 IUJ48_19895 4323948 .. 4323959 +  -3.6  -2.74263   GGGCGCGGAAAGGCA                GCGG ACTA TCGC                 GTTTACCAGTACAAT  40 124
        ssrA 4324395 .. 4324418 + -14.6  -5.78622   CGCCATAGCGCCAAA          TGGCCGACCT TTAC GGGTCGGCCA           TTTTTTTTCGCATCA 100 47
        wecB NONE
 IUJ48_19915 NONE
 IUJ48_19920 NONE
 IUJ48_19925 NONE
 IUJ48_19930 NONE
 IUJ48_19935 NONE
 IUJ48_19940 NONE
 IUJ48_19945 4337658 .. 4337691 +  -2.3  -3.66178   CGCGGAGCACGCGCG     CGCCTGACGTCTTCCT GGG GGGCAG-CATCATGCG     TTTCGACTTCAACGC  50 19
 IUJ48_19950 NONE
 IUJ48_19955 NONE
 IUJ48_19960 4341457 .. 4341484 +  -6.1  -3.44229   CAGCCATGGCACCAG        CAGCGCCTGGC GCTCCG GCCGGGCCCAG         TTGTACTGCTCCAGT  55 503
 IUJ48_19990 4346539 .. 4346571 +  -3.3  -3.60006   TCAAGCGCGCGGCGG      CGGATTGACCGCT CAGAGGA AGCGGTCCAGCAG      TTTGCGGCTGTGCTT  51 18
        cphA NONE
        cphA 4354856 .. 4354876 + -15.4   -4.4078   GGGACCGAATGAAAA            CGGGGCGC CTTGT GCGCCCCG            TTTTCATTGCCCGGC 100 51
 IUJ48_20015 NONE
 IUJ48_20020 NONE
 IUJ48_20025 4356296 .. 4356325 + -20.8   -4.8622   CCATCCAATGAAAAA       CCGGCGCCTGTG CTCACA CACAGGCGCCGG        TTTTTCATTGGGCGC 100 59
 IUJ48_20100 4380082 .. 4380103 + -14.5  -5.81412   GCCGCATGGGAAAAA           GCCCTTCGA TTCG TCGAAGGGC            TTTTTTTTGGGTCCG 100 51
         tex 4384888 .. 4384905 + -14.1  -3.51329   CGCAGCACCTTCCGA             CCGGCGC CCAG GCGCCGG              TTGTCGTTCAACCTA  81 86
 IUJ48_20115 4385672 .. 4385699 + -22.8  -2.73364   TCGGATTACAAACGA        CAAGGGCGGCGC AATC GCGCCGCCCTTG         TCGTTGCGCTCGCGG 100 53
 IUJ48_20185 4403500 .. 4403540 + -25.6  -3.14132   CGTTTTTCGATGTCC  CCGAACAACCCGCCGGCA GCGCA TGCCGGCGGGTTGTTCGC  TTCATGGCGGCCGGC 100 92
        puuE NONE
 IUJ48_20195 NONE
 IUJ48_20200 4407552 .. 4407575 + -16.8  -4.13872   GCCGGCATGAAAAAA          GGGCATGACG CGCG CGTCATGCCC           TTTCTGTCCTTGCCT  95 31
        mdeB 4412663 .. 4412693 + -24.2  -4.57073   CACCCTGAAAGCAAA       GGAGAAAAGCCCCG AAC CGGGGCTTTTCTCC       TTTTTCACCGGCGTC 100 41
 IUJ48_20215 4415215 .. 4415234 +   -15  -5.74122   TGATCGGCACGCAAG            GGACGCCC CGCG GGGCGTCC             TTTTTTTCTGTCCTG 100 52
 IUJ48_20220 4416053 .. 4416073 +  -8.1  -3.06492   AGGGTTCACGCTCAT            CGCCGCGGC CGC GCCGCACCG            TCTTGACCTGCGTAC  52 287
 IUJ48_20265 4424316 .. 4424335 +  -4.3  -2.57132   GCACGTACACCTGTC            TCTTTGC CGCCGC GCAAGGA             ATTGTCGCGAAGGGG  41 119
        prpB NONE
        prpC NONE
 IUJ48_20280 4428402 .. 4428421 + -16.4  -4.07568   CCGCGTAAGTCAAAA            CCGGCCGC CCGC GCGGCCGG             TTTTGACGGGCCCCG  95 219
 IUJ48_20285 NONE
 IUJ48_20290 4431035 .. 4431074 +  -2.8  -3.59981   CTGCCCCCATGCCAC  TGCGCGCGCGTTGT AAAAGCGCCGCA ACATCGCGCCCGTA   TCTTTGCTTATGCTG  51 90
 IUJ48_20295 4431485 .. 4431502 +  -9.8  -5.93809   AGCCCCTTTTATAGA             CCCGCC CTTACC GGCGGG              TTTTTTTTATGGCCG 100 92
 IUJ48_20300 NONE
 IUJ48_20305 NONE
 IUJ48_20310 4433871 .. 4433881 +  -4.6  -3.25823   TGAGCCATCTACGCG                 CCTG AAG CGGG                 TTCATCTGACAGCGC  49 21
 IUJ48_20315 4434867 .. 4434886 + -12.2  -3.09492   GATAACCCTTATACG            TCCCCGTT ACGC AACGGGGA             TATTGCAGTTCACGG  69 39
 IUJ48_20320 NONE
 IUJ48_20325 NONE
        hslO 4438269 .. 4438308 +   -23  -5.06414   TTGCACGAATCGACA  GGCGGTCATGCCCGCGCCA CAC TGGC-CGGCCATGACCGCC  TTTTTCTTGCCCCGC 100 63
 IUJ48_20335 4438934 .. 4438953 + -11.4   -4.1899   TATGCCGCAGCCTGC            GCTGCCCG TGAA TGGGCAGC             TTTTGGATGCGATCA  81 15
 IUJ48_20360 4444155 .. 4444168 +  -9.5  -4.68593   CATGCCATGGAAAAA               GGCCC CGAG GGGCC                TTTTTCCATGGTCGG  88 65
 IUJ48_20410 4456106 .. 4456121 +  -8.2  -3.75292   GTCCCAAATGAAAAA              CGCCCT TTGC GGGGCG               TTATTCATGATGCCT  67 62
 IUJ48_20430 4460015 .. 4460048 +  -3.7  -3.21912   GTCTACAGCGGCATG     TAGCAGGCG-CCCGGC CAT GGCGGAACGCGTGCTG     TTCATCGGTTGCGGC  47 23
 IUJ48_20435 4460877 .. 4460892 +    -9  -3.28712   AGCATGCAGGCATAG              TTCGGC CGCG GCCGAA               TTGTCGAGGGCGCGA  59 26
 IUJ48_20440 NONE
 IUJ48_20445 NONE
 IUJ48_20450 4463349 .. 4463363 +  -3.5  -3.98859   TCCTGATCCCCCTCG              CGG-GC CATC GCTCCG               TCTTTTTCCGTTCCA  58 35
 IUJ48_20455 4465251 .. 4465273 +  -6.1  -2.52896   GCCGCCCAGCACCTT           GCGCCAGCG GCGGG CGCGGGCGA           TCAGTTCGGCGCTGC  44 409
 IUJ48_20490 4473909 .. 4473949 + -21.3   -2.6155   GCAATCCTCCATACG  GCAAAACGCCGCCGGAC CATTCCA GTCCGGCGGCGTTTTAC  ATTCCTCTTCGCGAC 100 84
 IUJ48_20515 4479621 .. 4479637 + -11.5  -3.54543   CCGGCCGCCATGATT              GCGTGGC GGG GCCGCGC              TTTCCGCCCCTAGCT  72 100
 IUJ48_20525 NONE
 IUJ48_20530 4482783 .. 4482798 + -11.8  -3.54424   GAGCCAGCGCCAGTC              GGGCGC CTGA GCGCCC               TTTACGCCCCTCGCG  75 16
 IUJ48_20535 4483345 .. 4483358 +  -3.7   -2.6193   ATACCGCAGGATCAT               GCGGG TCCG CCCGA                TGCGTTAATTCCTTC  41 71
 IUJ48_20540 4484196 .. 4484220 + -20.1   -4.8622   GCGCTACAGTCGCAA          GGGCCTGCATG CAA CATGCAGGCCC          TTTTTCATTGGAGCG 100 48
 IUJ48_20545 NONE
 IUJ48_20550 NONE
 IUJ48_20555 NONE
 IUJ48_20560 NONE
 IUJ48_20565 NONE
         maf NONE
 IUJ48_20670 NONE
 IUJ48_20675 4509037 .. 4509053 +  -2.9  -3.29144   GGATCGGCTGCGACA              GGTCG TTCTTGC CGGCC              TTGTGCCACCAGTAA  45 166
 IUJ48_20700 4515968 .. 4515989 + -15.9   -5.8187   AAGCCGCAAGCAAAA           GCCCCCATC GAAT GATGGGGGC            TTTTTTTATTGCCTG 100 44
 IUJ48_20730 4522669 .. 4522702 + -13.2  -3.01712   CGATGGTCCATTACG     GGGCGCCCCTGGCAA CGGCC TTGC-ATGGGCGCCC     TCTTCCGAGCCGCCC  71 66
 IUJ48_20740 NONE
 IUJ48_20745 4526610 .. 4526631 + -17.3  -4.25104   CGCAAAACAAAAAAA           GCCCTCCGG CCTG CCGGAGGGC            TTTTCATCGCGCGGA 100 147
 IUJ48_20760 NONE
 IUJ48_20765 4529628 .. 4529641 +  -5.2  -3.08224   GCCCGTCCGGCCTAG               GGCG AAAATC CGCC                GTTTTACCCTCCAAT  47 72
 IUJ48_20770 4531067 .. 4531084 + -14.1  -4.21408   CACCGTCCGTCCACG             GGGGCCC TCGC GGGCCCC              TTTGCTTTTCCCGTT 100 48
        rsxB NONE
         nth 4532656 .. 4532672 +  -4.3   -4.4078   AACTCTTATAGAAAA              CCGTGGC ATC GCCATGA              TTTTCCTTACCCCGC  69 301
 IUJ48_20785 NONE
 IUJ48_20790 NONE
 IUJ48_20795 4535526 .. 4535560 + -17.9  -2.64651   GTCGATGCGACCCAT     TGATGCGACCTGGCC CGCGC GGCCGGGTCGCATCC     TGAATTTGCCCGCTT  83 46
 IUJ48_20800 NONE
 IUJ48_20805 4537508 .. 4537532 + -18.6  -3.06312   TCGCCTGCCTGACCT          TCGGGGCCGC TGCAC GCGGCCCCGA          TTGCATGGCGCCTTT  89 62
 IUJ48_20810 4538592 .. 4538610 + -10.3  -2.95491   GCGCTCGACAAGGAG             TGAGGCG GTCCG CGCCTCA             TGTATCCTGACGTTT  62 23
 IUJ48_20815 NONE
 IUJ48_20820 NONE
 IUJ48_20825 4542308 .. 4542325 +  -7.7  -3.65812   CCGTAGTCGGCCACC             TGCAGCGC CGC GCGC-GCA             TTCTGTTCCACCAGC  60 184
        msrB NONE
 IUJ48_20870 4550306 .. 4550334 +  -4.3  -4.13767   CTGGCGCCCGCTTCC        CTCCCAGGGCGCG CCC CGCGCGCCGGAAC        TTTTACGATCGACGC  62 57
 IUJ48_20875 NONE
 IUJ48_20880 4551437 .. 4551457 +   -14  -5.93809   GTCTTTCCGCAGAAA            CTGCCCGC CTTGC GCGGGCAG            TTTTTTTTGTCCGCG 100 48
        lplT 4560055 .. 4560069 +  -5.6  -3.66803   GGGCCCGGTCTAGAG               CTGCCG GGC CGCCAG               TTTCAGGTCTTGCCA  57 96
        ompR 4563081 .. 4563095 +  -3.5  -2.50816   TCGGATACGTGTTTG               TGCCG GACGG TGGCA               GTTGATCGATACGCC  39 6
 IUJ48_20920 NONE
 IUJ48_20925 4565144 .. 4565180 +   -18  -3.65902   ACGCTGTAATTTCCA   GCCCGGC-CGGGACCTG CTCG CGGGTCCCTCGCCGGGC    TTTAACTGCGCTAGA  93 32
 IUJ48_20930 4565780 .. 4565803 + -18.2  -4.78326   GCGGGCAATGAAAAA          GCCCGCCTGT TCGC ACAGGCGGGC           TTTCTTTATTTGCCG 100 76
         mfd NONE
        serB 4574222 .. 4574247 + -11.1  -3.25223   CAGCCATGGCGTAGT         CGCCCGACGGCA GCG TGACG-CGGGCG         TTGGTGGTCTCGGTG  66 485
 IUJ48_21050 NONE
 IUJ48_21055 NONE
 IUJ48_21060 4597546 .. 4597559 +  -2.3  -2.73875   TCCAGCCCAATGCCG               TCGCG AAAC CGTGG                TCATGTTCGGGGCGG  39 286
 IUJ48_21100 NONE
        axyY NONE
        oprZ 4611564 .. 4611587 + -10.2  -3.57144   ACCAGATCTGCGTTG          GCCGGCCGCGC CCG GCGCTGC-GGC          TTTCCGAATCCACCA  67 484
 IUJ48_21145 NONE
 IUJ48_21150 NONE
 IUJ48_21155 4626542 .. 4626573 + -23.8  -3.39895   ATCCGCGCGGCCCCA      CAGGCCCCCGACGCC TAC GGCG-CGGGGGCCTG      TTCCTTGATGCGGGA 100 53
 IUJ48_21160 NONE
 IUJ48_21165 4629557 .. 4629577 +   -14  -3.75629   GCAACGCCAAGCAAA            GAGGCCGC GAAAA GCGGCCTC            TTTGCATTGCAAATA  86 46
 IUJ48_21205 4640293 .. 4640312 +  -7.1  -3.14564   CATGTGCCGGCGGCA            CG-GCGGG CTGAA CCCGCGCG            TTCATGGCGGGATCA  51 74
 IUJ48_21215 4642080 .. 4642096 + -10.9  -2.85712   CGCGCGCCAGCATCG              GGAACAG CAC CTGTTCC              TCCTTCTGCATGTGG  61 386
        norR 4644444 .. 4644458 +  -7.8   -3.9461   GTGCGTTGCACCTCG               GGCGGA TAC TCCGTC               TTCTTGTTGCAGCCA  67 301
 IUJ48_21250 NONE
 IUJ48_21260 4650916 .. 4650932 +  -5.8  -3.68529   CTGGGCGGTGCCCAG             GCG-GCC CACC GGCACGC              TTTCGATGATGCGGT  61 147
 IUJ48_21275 NONE
 IUJ48_21280 NONE
 IUJ48_21285 4656846 .. 4656862 +  -2.1  -3.65351   CGCCCCAGGCAAAAC              GCATGTC GTT GACCAGC              TTTCCCTGCGCATAG  50 228
 IUJ48_21335 4667840 .. 4667853 +  -9.5  -3.28791   AAAAACTGGCGACGA               CGGCC AAAC GGCCG                TTCTGACGGCCGGCT  62 6
 IUJ48_21340 4668717 .. 4668744 +  -8.2  -2.91645   GCCCCGGGGCCCTGG        GAGGCCGCGCCC GATC GGGCGCGGCAGG         TGCTTACTTCTTCTT  56 43
 IUJ48_21355 4676974 .. 4677009 +  -5.2  -2.62616   GACCGCCCGGCCGCC    GCCGGGTCACGCCGAT GCGT ATCCGCGCCGCCCTGC     TGCTCTGCCCGCTGG  43 91
 IUJ48_21360 4678239 .. 4678266 +  -9.8  -3.21099   CCTGAGCACCCACTT        GGGCGTGGGC TGGCCGTT GCCCAGGCCC         TTGATGATGCGCCGC  60 344
 IUJ48_21380 4682168 .. 4682178 +  -6.8  -3.65046   TGGCCGGATTGGCGA                 CCAG CAT CTGG                 TTGTTGCCCTGCCCG  57 416
 IUJ48_21410 4689205 .. 4689222 + -14.1  -4.00782   GCCGCCATGAAAAAA             GGCCGGC TATC GCCGGCC              TTTCTCATGCTGTCC  93 74
 IUJ48_21430 4691916 .. 4691952 +    -5  -3.28712   CCTTCGCTTGTGCTG   GGCGCG--GAGGCCGGTC AGC GGCGGGTCGCGTCGCGCC   TTGTGGCACGGCGCC  49 112
 IUJ48_21445 NONE
 IUJ48_21455 4698020 .. 4698033 +  -9.5  -2.52464   ACCACCCCTATGCCA               GGCGC CGCC GCGCC                TGCCTTGCCCGCGCG  55 484
 IUJ48_21460 4699159 .. 4699202 +    -8  -3.53811   ACCAGTTCGATGTCG TCGACCAGCCGGCTGACG ATGGGCTG CGTCAGCCCGCCCGGCGA TTTCACCGCGATGCC  60 505
 IUJ48_21485 4704221 .. 4704240 + -10.7  -5.45802   TCCCCCATGAAAAAA            CCCGCCT TCATCC AGGCGGG             TTTTTCTTTTGCCGG 100 42
 IUJ48_21510 4711330 .. 4711348 + -13.8  -4.09685   CGAGAACAAAAAAAA             CCGGCCCT TTC GGGGCCGG             TTTTCCGCGCTACCC  93 60
 IUJ48_21530 4714759 .. 4714783 + -20.1   -5.4505   CAAAAACACAGACGA          CCCGCACAAGC CCC GCTTGTGCGGG          TTTTTTGTTGCCCGG 100 79
 IUJ48_21540 NONE
 IUJ48_21545 4719145 .. 4719178 +  -4.4  -2.81464   GCGCATCGCGCCGGC     GGCGCCCGGTCG GGAACGCTGA TGCCCGCGCGCC      TGTGCTGCCTGCTGG  43 4
 IUJ48_21550 4720092 .. 4720121 +  -2.6  -3.42503   CCTGGTCCTGATCCT       GCGGGGGTTGCG GTGAAG CGCGCGCCCCGG        TTCTGGATGTTCGGC  45 10
 IUJ48_21555 NONE
 IUJ48_21560 NONE
 IUJ48_21565 4722805 .. 4722825 +  -7.5  -5.52384   TACCAGGACTGAAAC            CCGGCCG TTTTTCC TGGCCGG            TTTTTTTGATAAACG 100 29
 IUJ48_21570 4725162 .. 4725195 +  -8.1  -3.60792   CGCACGGTCATGCTG     TCGGCAACCGTGGATT TCT GATCC-CGGCCGCCGA     TTTCAACCTTCCGCC  63 5
 IUJ48_21590 4729608 .. 4729627 +  -2.8  -2.70932   CGAAGACCCAGCCGA            TCT-CGTCG TCG CGGCGCAGG            TCGTTGCGCAGGCCG  39 255
 IUJ48_21605 4731668 .. 4731694 +  -5.6  -3.97331   GACTACCTGTAACTC         GGCCGCCTCGCC GAA GTCGGCGCCGCC         TTATTTCAGTCGATT  64 148
 IUJ48_21610 4732260 .. 4732279 + -13.6  -5.14563   GGCACGAAAAACAAA            GGCCACTC CCAG GAGTGGCC             TTTTTTCCTGCGGGG 100 50
 IUJ48_21635 4738124 .. 4738144 + -19.7  -2.53876   TTTTTCTGAGCCTTT            GCGCGCGGC GCG GCCGCGCGC            TCCGTTGCGCTACCG  89 32
 IUJ48_21640 4739884 .. 4739895 +  -5.8  -2.73364   ACCACAGCGCCGGCA                TCGG CGCG CCGA                 TCCTTAGGATGCCAC  46 83
 IUJ48_21645 NONE
 IUJ48_21650 4741729 .. 4741745 +  -3.6  -2.82516   CGACGTGCTCGACCC              GCGCCT GCGCA AGGAGC              TGTAATCATGACCGC  41 4
 IUJ48_21655 NONE
 IUJ48_21660 NONE
 IUJ48_21665 NONE
 IUJ48_21670 NONE
 IUJ48_21675 4746775 .. 4746792 + -14.1  -5.00616   CACGTATGCAAAAAA             CGGCCGC CCGC GCGGCCG              TTTTTTGCGGGCAAC 100 205
        trxB NONE
 IUJ48_21695 NONE
 IUJ48_21700 4752171 .. 4752191 + -13.3  -4.36914   GACCTACCCGCCATC            CGGCACGAT CAG GTCGTGCCG            TTTTCTGCGGGCGGC  95 79
        kdpF NONE
        kdpA NONE
        kdpB NONE
        kdpC 4759977 .. 4760000 + -13.1   -2.9155   CGCTGGACCAACTGG          CGCCGGTGC AATGAC GCGCCGGCG           TATAGTATTGCCAGC  71 12
 IUJ48_21735 NONE
        kdpE 4763637 .. 4763650 +  -3.7  -2.71003   ACGTAAGTCTTGTCT               CGCCG TTTA CGCCG                CTTCTCCTATCTTGG  42 132
 IUJ48_21745 4764456 .. 4764469 +  -3.7  -4.66833   CGTTCTGACGCGCCC               GGGCG TTGA CGCGC                TTTTTACGCTTCGCG  75 33
 IUJ48_21750 NONE
 IUJ48_21755 4765917 .. 4765936 +  -7.1  -3.38207   GCTGCGTCACGCTGT            CCAGGTG CGTCAC CGCCTGG             TTGATCTGTTCGATG  55 128
 IUJ48_21780 4772093 .. 4772110 + -12.7  -5.22039   CCGCCCAACGAAAAA             CCCTCGG CATG CCGAGGG              TTTTTTCACTTTCGC 100 46
 IUJ48_21795 4773910 .. 4773934 +  -6.9  -2.78679   CGGCTCGCCGCCATG          ACCCGCGGCGC CCA GCGCCGCTGAC          GTTTCACTCACGGCG  49 2
 IUJ48_21800 4775119 .. 4775163 +  -8.4  -2.52896   GGCGATGCGAGTGCT GTCGAAGTGAC-GCGCCGCCG CGCC TGGCGGCGCCGTCCCCGTGGC TCGCTTCAGCCGTCC  53 16
 IUJ48_21820 4780000 .. 4780017 + -12.7  -5.83822   TTCCGGCATCCGACG             CCCCTGC TCCG GCAGGGG              TTTTTTTTGCCTGTC 100 50
 IUJ48_21825 4780877 .. 4780894 + -14.1  -5.75342   GTACCCGTAGTGAAA             CCGCGGC GCAA GCCGCGG              TTTTTTTTCGCCCCG 100 253
 IUJ48_21865 NONE
        recN 4790593 .. 4790613 + -15.5  -4.56914   CCGGGAATAAAAAAA            GCCCCTTCT TGG AGAAGGGGC            TTTTGCTTTCACTGA 100 87
 IUJ48_21880 NONE
        dapB 4792616 .. 4792631 + -10.4  -5.07011   CCACCATGAAAAAAA              GGACCC GCGC GGGTCC               TTTTTCATTTGTGTG 100 50
 IUJ48_21900 4794139 .. 4794152 +  -9.5  -5.26875   AAGTCGTTGAAAGAA               GGGGC GAAA GCCCC                TTTTTTCATTCCAGC 100 74
 IUJ48_21905 4796742 .. 4796758 +  -4.4  -3.30124   GGATCGTGCCAAATC             GGC-TCG GCGA CGATGCC              TTCTCCCACATCAGC  47 509
 IUJ48_21955 NONE
 IUJ48_21960 4822747 .. 4822766 + -13.6  -2.74563   ATCTGCTTTAGCCGC            GGGCGCAT GTTC ATGCGCCC             TCCTTGCGCTGTGCG  71 42
 IUJ48_21990 NONE
 IUJ48_21995 NONE
 IUJ48_22000 4836232 .. 4836246 +  -5.7   -3.6682   TTCAACTCCGCGCCC               TCAGC ATTGC GCTGA               TTTCCGTGCATGCCA  57 228
 IUJ48_22005 NONE
 IUJ48_22010 NONE
 IUJ48_22015 4839960 .. 4839972 +  -4.1  -3.53012   CTCTCCAGCCCGAGA                TCGTG CAC TACGA                TTTGAGCGCCCACAA  51 154
 IUJ48_22035 4842063 .. 4842087 +  -4.2  -3.73068   AAACTGATCGGCACA          CTCAAGGACA TCTTC TGCCCCTGAG          TTCTTGACTTCGACG  56 2
 IUJ48_22040 4842743 .. 4842754 +  -3.6  -3.12668   CTGGGTCGGAGGGCT                GCTG GTGC CGGC                 TTCGCTGTGGACGTC  43 129
 IUJ48_22045 4843443 .. 4843460 +  -7.7  -3.68988   AAACGCTTCTGCACC             CATTGCC AGTC GGCGATG              TTCTCTTGCCTGGCC  64 188
 IUJ48_22055 NONE
 IUJ48_22060 NONE
 IUJ48_22065 4846757 .. 4846779 +    -2  -2.55351   TCGCCGAACGCATTG           TTCAATCC CACCAGC GGATCGAA           ATTGCTGTGCGGCCG  38 236
 IUJ48_22140 NONE
 IUJ48_22145 NONE
 IUJ48_22150 4867879 .. 4867890 +  -2.2   -4.2123   CCCACCCATCATTTC                CTCT TTTT GGAG                 TTTCTTGACTCAGTA  63 81
 IUJ48_22170 4872949 .. 4872960 +  -4.4  -3.16647   CCTGGCGGATGTGAG                GCAT GACC ATGC                 ATTTTCATACCTCGC  45 27
 IUJ48_22175 4873972 .. 4873988 +  -6.6  -2.52516   CCTGGCTTCACCTGG              GGTTCA AGACA TGAACC              GTTCCTGGTGGCCGC  47 12
 IUJ48_22180 NONE
 IUJ48_22185 4876716 .. 4876743 +  -9.8  -3.73068   GTGGCCGGAACAGTC        GCGATGCGCTCGG ATG CCG-GCGCGTAGC        TTCTTCACTTCAGCG  71 289
 IUJ48_22200 NONE
         map NONE
 IUJ48_22210 4879231 .. 4879249 +  -7.4  -4.52873   TGAAGTTCGATCAAG             CCATCGGT CGA ACAGATGG             TTCTTTTTATGCGAA  81 509
 IUJ48_22220 4880037 .. 4880052 +    -6  -3.06796   GCACCCTCGGCCTAT              GCTGCG GGGA CGCTGC               TTCCGTCAGGTAGGC  49 135
 IUJ48_22225 4881170 .. 4881180 +  -4.6  -3.50853   CGCGTTGGTACTCTT                 GGGC AAT GTCC                 TTGTCGTTGCCGAAC  52 420
 IUJ48_22245 4883578 .. 4883598 +  -3.9  -3.48766   ACAACGCAAACTGAA            CCATGCTGA TCG TCATCACGG            TATTTAAGTTGTAGG  49 460
 IUJ48_22275 NONE
 IUJ48_22280 4889070 .. 4889095 +  -8.3  -3.05384   AGGTCTTCGAGTCCT         TGGTCACTGGGG TGA TCCC-GTGACCG         TTGCGTCAGACGGGG  57 45
 IUJ48_22335 NONE
 IUJ48_22340 NONE
 IUJ48_22345 NONE
 IUJ48_22350 NONE
 IUJ48_22355 NONE
 IUJ48_22360 NONE
 IUJ48_22365 4902740 .. 4902750 +  -4.6  -3.65046   TGGTCGAGAAGTAGT                 CGTC AAT GGCG                 TTGTTGGCCTCGACC  54 351
 IUJ48_22375 NONE
 IUJ48_22380 NONE
 IUJ48_22385 4905427 .. 4905438 +  -7.2  -3.55071   CGGCAGCACCGATGA                GCCG CACG CGGC                 TTTGCAGCGCTGTGC  57 121
        merR 4931559 .. 4931574 +  -7.5  -3.65351   CTTCGGTCAGCACGG              GGCGC AGGTCA GCGCC               TTTGAATCGCAGTGA  63 109
        cadR 4940899 .. 4940913 +  -3.4  -4.07568   GAGTGTCACTCTTTG               GCGCCC AGC GTGTGC               TTTTGCGACCGGAAA  60 490
 IUJ48_22600 4942340 .. 4942372 +  -8.4  -3.14132   GTCGTCTCTCCTGTT     CGT-GTGGCCCAGGCC AAT GGCC-GGGCCGGGACG     TTGATGGGCAGGAGA  57 220
 IUJ48_22660 4954546 .. 4954572 +  -4.4  -5.46657   CTCCAAATACAAAAA        GGAAGCACCGG CCTATA CCGA-GCTTCC         TTTTTTCTTGCAGTA  93 441
 IUJ48_22665 4954715 .. 4954726 +    -3  -3.29471   CATCCCTACGCCCGG                TCAA TCGA TTGA                 TTGCTATGGTGACGC  45 76
 IUJ48_22670 NONE
 IUJ48_22675 4956091 .. 4956107 + -10.8  -3.21099   TAGAAGGCCAGCACG              GCCGCC TTGTT GGCGGC              TTCCTGCTCGGGCGA  64 420
 IUJ48_22690 NONE
 IUJ48_22695 NONE
 IUJ48_22700 4959089 .. 4959122 + -14.5  -2.51133   GGCCTCGGCAGGCTA     GCCGCGG-CACGACGG GCG CCGCCATGGCCGCGGC     GTTCATGCGTCCCTG  73 25
 IUJ48_22705 NONE
 IUJ48_22710 4961108 .. 4961129 + -11.5  -2.72991   GACAGGCAAAAAAAG           AGGCCACCC CGAG GGGTGGCCC            TAATTCCAGCTCTGC  62 76
 IUJ48_22720 4963217 .. 4963243 + -13.7   -4.8622   CCCGGCAGTGAAAAA         GCCCCTCGGTT GCTGA AACCGCGGGGC         TTTTTCGTTGGGGGA 100 100
 IUJ48_22740 4966422 .. 4966438 + -13.7  -4.27316   GCACATATGAAAAAA              GCGCCCT GCC AGGGCGC              TTTTCCGTTGGGCGC 100 45
 IUJ48_22755 NONE
 IUJ48_22760 NONE
 IUJ48_22765 4973999 .. 4974026 +  -2.4  -2.78384   GGCGCGTAGCGCAGG        GCCCGGCGCACG CCAT CGGGCAGCGGGA         TGTAGTCGCCGAACA  39 237
 IUJ48_22780 4976026 .. 4976041 +  -4.7   -5.4505   ATTACTGCCCCAACC              TACCG TCCTAC CGGTA               TTTTTTATTCAGGAA  93 69
 IUJ48_22785 NONE
 IUJ48_22790 4976714 .. 4976736 +  -3.5  -2.76671   GACTTGCACGACGTG          CCCGA-CA-TG CTG CACTGATCGGG          TCGATTTTGGCTGCT  40 8
 IUJ48_22795 4978077 .. 4978096 + -11.4  -3.20382   AGGTCGCGCCGTGCC            TGCACCGG CTTG CCGGTGCG             TTCCTCGCTCTGCGC  64 259
        galU 4980313 .. 4980345 +  -3.2  -2.54896   CCTGCTGCCGGAATG      ACGACGAGGCGGCC GCACG GGCCGCCTGATCAC      TCGCTTGCGTGGGCG  39 25
 IUJ48_22835 4989394 .. 4989408 +  -8.5  -3.03124   GGATGGCGACCAGCA               CCGGC CCCCA GCCGG               TCTTGCGGGATGGCG  55 224
 IUJ48_22845 4990985 .. 4991000 +  -3.2  -5.40474   TGCTGCAGGGTTTCC              GGGC CTGATCTC GCCC               TTTTTTTGCCCGCCT  93 18
        dusB NONE
 IUJ48_22855 4992381 .. 4992423 +  -3.9  -3.59979   ATCCAGGTATAGCGC ATTGCCGCGC-GGGCGGGCC GGCT GGCGCGCCCCGCATGACAGA TTTCCCATCCCGACC  53 29
        purH NONE
        ruvC 4994673 .. 4994691 +  -7.3   -3.4811   TAGAATCCCCGCATT             CGCCGCG ACTGA CGCGGCC             TCTTCTTCTGCCAGG  60 80
        ruvA 4995472 .. 4995490 +  -8.8  -3.35679   ATTCAGTTCGGGGGC             CATCGGCG CCC CGCAGATG             TTGTCGCTGCGCAGG  59 207
 IUJ48_22900 5002444 .. 5002495 +    -4  -3.60971   ACCTGGCTGAGCTGG TGAGCCGGCCCGCCCACGGACGGA AATG TCCGCCCGCGCCCGGGCGGTCCGA TTTGCGGCTTAAAAT  53 23
        recQ 5004741 .. 5004776 +  -5.9  -3.53012   ACGGCAGCCAGCTGA    AGCGGTCGGCGCGGC CCGGCA GTCGCGCCAGCAGCA     TTTCGGCGGCCACGA  55 397
 IUJ48_22920 5008828 .. 5008877 +  -3.3  -5.43866   CGCATGAAAGACCCG CCGGATGGCGCCGCGTCCGGCG GCGCCTG CGCCATCCGCCGCGAT-TCCGG TTTTTTTCCCCCTTG  93 74
        minC 5010040 .. 5010052 +  -2.6  -4.99134   CACATTCTGTAAGAA                GCCT TACAC GGGC                TTTTTGCTTTACGAT  79 151
        minD NONE
        minE 5011227 .. 5011261 +   -23  -3.54424   CGTTCTGCGCCACAA     AGCAAAAACGCCCGGC AAT GCCGGGCGTTTTTGCG     TTTGGCACGGTACGC 100 73
 IUJ48_22965 5015936 .. 5015946 +  -2.4  -3.33261   GGCCCGCATACAGCA                 CCAG CGG CAGG                 TTCTCGGCATTGAGC  45 295
 IUJ48_22975 NONE
 IUJ48_22980 5018176 .. 5018195 +  -9.3  -3.53091   GCCACCAAGCAAAAA            GGGCTTC CCAAAA GAAGCCC             TTTGCCAAAACCACT  65 77
 IUJ48_23015 NONE
 IUJ48_23020 NONE
 IUJ48_23025 NONE
 IUJ48_23030 NONE
 IUJ48_23035 NONE
 IUJ48_23040 NONE
 IUJ48_23045 NONE
 IUJ48_23050 NONE
 IUJ48_23055 NONE
 IUJ48_23060 5037485 .. 5037495 +  -4.6  -4.09864   CCGGCGTCCCACGCA                 TCCG CTT CGGG                 TTTTGACGGATAGGT  64 41
 IUJ48_23065 NONE
 IUJ48_23070 NONE
 IUJ48_23075 NONE
 IUJ48_23080 5042520 .. 5042548 +  -7.2  -3.56092   AGCCGCGGCCAAGCG        GACGGGCGCGGG CCCGC CCCGCGCCGGCA        TTTCCCGGGTGCTCA  59 39
 IUJ48_23090 5045102 .. 5045150 + -17.3  -2.81888   TTTCCGGTTGTGCGG CCGGGTCGAAGACGCCCGCAAGC CAA GCTTGAAGGCGGCTTCGCCCCGC TAATTCGATTTCCGC  87 443
        uvrA NONE
 IUJ48_23115 5054998 .. 5055008 +  -2.4  -2.71011   GGGTAGGATAGACCC                 CGGC CCC GCCC                 TCCTTCGCCCGCCGT  38 61
 IUJ48_23120 5055774 .. 5055787 +  -3.8  -3.14564   CGCGGTGGTTGCGGG               CGTG CCAGAA CACG                TTGATGACGGACTCG  45 128
 IUJ48_23130 5056882 .. 5056897 +    -4  -3.14564   CGCCAGCGCCGCCCG              CGAACAG CCG CTGT-CG              TTCATGCCCCCCTGG  45 133
 IUJ48_23135 NONE
 IUJ48_23140 NONE
 IUJ48_23145 5059083 .. 5059113 + -14.7  -2.82635   GCGCAGGACAACCCC      TGCGGCGCCACGGC CTGC GCCGAGGCGCC-CA       TATCGTCCTCGGCCT  72 169
 IUJ48_23205 5070794 .. 5070816 +    -2  -3.59979   ACTCGGTGGCGGGAT           GCAGATTT AGACCTA AAACCTGC           TTTCCCATGAAGCAG  50 54
 IUJ48_23235 NONE
 IUJ48_23240 5080001 .. 5080014 +  -4.5   -3.7941   GGGAGCGTTTCTTCG               GCGGT ATAA ACTGC                TTGTTATCAACGCTG  56 90
        pdxH 5080674 .. 5080707 +  -9.3  -2.95388   GCCTGTCGCCCTGAC     GCCGCCGGGCGCCGC TCCC GCGGCGCCCGCCCCA      TCTATCAATTGCATG  59 27
 IUJ48_23250 NONE
 IUJ48_23255 NONE
        purU 5083314 .. 5083330 + -10.1  -2.71144   GGTGTTCCACGACCA              GCCTGAC CTT GTCGGGC              TGGTTGCGGCGGGTC  56 107
 IUJ48_23270 NONE
 IUJ48_23275 NONE
 IUJ48_23280 5087394 .. 5087420 +  -2.3  -3.08679   CCATCGGAGCAGCAT        GCAAT-GACC-GC CCG GCTGGACGATTGC        TATTCCATCGAGCGC  42 45
 IUJ48_23285 NONE
 IUJ48_23290 NONE
 IUJ48_23295 5089802 .. 5089830 + -10.2  -4.25104   CCGTTCAGCCCGCGG        GGAACTGGCGCT CGACC AGCGCCAGCGCC        TTTTCCTGCAGCGGC  86 78
 IUJ48_23305 NONE
 IUJ48_23310 NONE
 IUJ48_23315 5094740 .. 5094756 + -10.8   -4.7497   TCCATGCGCCGCACT              GCCCGC CTTGC GCGGGC              TTTTTCATGCCTGCC  95 63
 IUJ48_23320 5096638 .. 5096665 +  -6.9  -4.19953   CATGCGCTCCAGGGC        CGGCGCCAGCGC CTCCA GCGC-GGTGCCC        TTTTCCAGTTCGGTC  69 238
 IUJ48_23330 5099320 .. 5099335 + -11.8  -2.68823   CGCAAAGAAAAAAAA              GCGCCC CGCG GGGCGC               CTTCTCTGCCAGGCC  65 65
 IUJ48_23340 5101552 .. 5101569 + -14.1  -3.45571   GGACCTGAAAAAAAA             GCCGCCC TACT GGGCGGC              TTCGTGTTTGGCGAC  81 67
        tsaE NONE
 IUJ48_23355 5105015 .. 5105046 + -17.4  -4.07568   GACTACGCCGGATAC      GAATAGGGCCATGC CTGC GCATGGCCCTTTTC       TTTTGCGCCCGCGCC 100 41
 IUJ48_23360 5108181 .. 5108193 +  -4.8  -3.04792   ATGTAGCGGCCGATG                GCGT AGTTC ACGC                TGTTGCCGGTGATGG  46 456
        mutL NONE
        miaA NONE
 IUJ48_23380 5112040 .. 5112056 + -10.8  -3.81146   ACTGCGAAAGAAAAA              CCCGCC ACCAG GGCGGG              TTGTTGATTGCGAGG  74 45
         hda NONE
 IUJ48_23395 NONE
        pcnB NONE
 IUJ48_23405 5116722 .. 5116746 +  -7.8  -3.28984   GCTGGACTGAACAGC         GCCTGGCGGCA CGGT TGCCGCC-GCC          TTCCTGATTACCTTG  57 31
 IUJ48_23430 5121704 .. 5121738 +  -7.6  -3.28712   AAGGAGCCTCGCGCC     GCGGGCCCTAGCGTCC GGT GAACGCCGGCGCGCGC     TTCTGCGCAAAGGCG  57 114
 IUJ48_23450 NONE
 IUJ48_23455 NONE
 IUJ48_23460 5128138 .. 5128155 +  -3.3  -3.05844   CTGAAAGAAAGGCTG             GCGTAGGC GCG GCCC-CGC             TGTTCCGCTCCGCGA  43 20
 IUJ48_23465 NONE
 IUJ48_23470 5130599 .. 5130614 +  -2.4  -3.17075   GAACGCCCCAAACGC              CTCCGG GCTG CCGGGC               TTGGGTTCCGCCCCC  43 475
 IUJ48_23485 NONE
 IUJ48_23490 NONE
 IUJ48_23495 5135867 .. 5135887 +  -3.2  -4.36914   CGCGTTTTTCAAAAA            TCAGGCCG GCTAG CTGTCTGA            TTTTCTCCAGACCGA  66 13
 IUJ48_23500 5138767 .. 5138805 +  -8.7  -3.87994   GGCGCTGGGCGTTCT   GATCGTGTTCGCCCCGA TTCAT TCGGGGCGTCCAAGACC   TTTATCAGACTGCCT  69 24
 IUJ48_23505 5140453 .. 5140472 + -16.4  -3.37732   CCGGGGATAAAAAAA            GGGCGCCG TCAC CGGCGCCC             TTCTCGCGTTCATGT  90 97
        glyQ NONE
 IUJ48_23525 NONE
        gmhB NONE
 IUJ48_23535 NONE
 IUJ48_23540 NONE
 IUJ48_23545 NONE
        gloA NONE
 IUJ48_23555 5150568 .. 5150613 + -13.1  -3.14132   ATCAGGACGACTGAT CGTCCTTCGGGACGGGAGCCG GGCT CGGCTCCTGCCCCGGAGCCAG TTCCTCCGGCGCGAA  72 27
 IUJ48_23565 5154551 .. 5154565 +  -8.5  -3.64703   TGCGCGACATGATCA               GCGGC GTGTG GCCGC               TTTCGGTCAGCGCGA  63 371
 IUJ48_23575 5157000 .. 5157016 + -10.8  -4.44548   TCATGACGAAAAAAA              GCCCGC TGATC GCGGGC              TTTTGCTTGCCTGTG  88 52
 IUJ48_23595 NONE
 IUJ48_23600 5163777 .. 5163790 +  -9.5   -3.3247   CGCGTACCCATCGCG               CCCGG TTAA CCGGG                TATTCTCTGACGCTT  64 96
 IUJ48_23605 5164599 .. 5164616 +  -9.8  -5.86061   TCGCGCCACACGGAA             CCCGCC CTCGCC GGCGGG              TTTTTTTTGGTCCAG 100 60
 IUJ48_23610 NONE
 IUJ48_23615 NONE
 IUJ48_23620 5167018 .. 5167043 + -21.9  -2.52464   GAGCGCCGCCGGCTC         GTCCGCCCGCC GGTG GGCGGGCGGAC          TGCCTTCCCGCCGCC 100 39
 IUJ48_23645 5169937 .. 5169947 +  -5.4  -3.35679   ACCAGCTTTTCATTG                 GACA GCG TGTC                 TTCTCCGTCCCAACG  49 182
 IUJ48_23665 NONE
 IUJ48_23670 5174894 .. 5174909 +  -6.8  -3.71848   GAACACGAATACGCG              CGGTGT CATC ACGCCG               TTCTTCATCGACAGA  61 383
 IUJ48_23680 5179162 .. 5179174 + -10.5  -3.71848   CTCGATCATTTCGAG                CGCGC GTT GCGCG                TTGTTGATGACGGCC  71 348
 IUJ48_23690 5180658 .. 5180672 +  -5.6  -3.71848   CACCAGTTCGCTCTT               GACGCC GTA GGGGTC               TTCTTCCTCGACCCG  58 494
 IUJ48_23710 NONE
 IUJ48_23715 5183228 .. 5183245 + -14.1  -5.63374   CGGTCCACTTTGCAG             GCGCGCC CTCC GGCGCGC              TTTTTTTCGTCTTCC 100 55
 IUJ48_23720 NONE
 IUJ48_23725 5186358 .. 5186371 +  -4.5  -3.47573   GGCGATTTAAGACTT               CG-CCG AAT CGGCCG               TTGTCCTGTAGGTCA  51 58
 IUJ48_23730 5186743 .. 5186779 +  -3.6  -3.77219   GATCCTTGGGGCCCG   CCGACGATTGCGGGCGA TCGC TTGACCTCAACCG-CGG    TTTAGGTTCGATACT  54 39
 IUJ48_23735 5187239 .. 5187257 +    -8  -2.79183   CTGGTCGAGATCGAG             GCGACGGC GCT GCTGCCGC             TCTGATCCCCCTGCC  52 2
 IUJ48_23785 5200316 .. 5200334 +  -7.4  -3.09135   CGGAAATAGCCGTCC             GCCGTCAT GAC ATGACGGG             TCTCTTCGGGCTTCT  52 448
 IUJ48_23795 5203366 .. 5203401 +  -6.1  -3.05384   CCGCCAGGCATGCAC   GGCGGTGTCGGCCG-GG AGGC CCGCGGGC-ACGTCGCC    TTCGATGAAGGCCAG  48 505
 IUJ48_23805 5205097 .. 5205124 + -25.6  -4.75372   GATAAAGCGCCTCGG        CGGGGCGCCGGC CCGC GCCGGCGCCCCG         TTTTTCCTGCATAAT 100 55
 IUJ48_23810 NONE
        mgtE 5207195 .. 5207222 +  -2.6   -5.1101   ATCTTTCGTGTTTCC        GCAATGACCG CCAGACTC CGGGCAGTGC         TTTTTTGCCTGCTGC  83 156
        pagP 5207854 .. 5207864 +  -8.2  -2.63382   TCGTCGATGCCGTGT                 GCGC GCA GCGC                 CTTCTCGGTCTCCAC  51 127
 IUJ48_23840 5210964 .. 5210983 +    -7  -3.14564   AATAGCGCTTGTCGT            AGCCGGCC TTCT GGCTGGCC             TTGATCCAGCCATAG  53 327
 IUJ48_23875 5219949 .. 5219977 +  -8.7  -3.51032   GGGGCTTGCCCAGCA        GATACAGGTCGCC GAT GGCGTCCAGGATC        TTGTGCTTGACGAAT  61 394
 IUJ48_23960 5240974 .. 5240992 +  -5.9  -3.33261   ATCCGGACCATGGAA             GCTGGCG AAACC CTCCAGC             TTGTCGAGCTTGCCG  52 229
 IUJ48_23975 5243702 .. 5243715 +  -6.7  -2.70932   CTTTTCCGCCCACCA               CGCAT CATC ATGCG                TAATTGCAGCGCGCG  48 214
 IUJ48_23985 5245551 .. 5245570 +   -15  -3.86015   CGCTGTAAATGAAAA            GGCCGACG GTGA CGTCGGCC             TTTCTAACGGAAATC  91 107
        hppD 5254732 .. 5254748 +  -9.4  -5.86061   GCGCTGGCCTTGAAA              CCTCGC CTTGC GCGAGG              TTTTTTTTCGTCCCG 100 77
 IUJ48_24045 5258689 .. 5258711 +  -5.5  -3.31415   GGATGATCTCGCCCT          GGCC-GCGCC AGGT GGTGCTGGTC           TTGCCTTTGCTGCTG  49 383
 IUJ48_24070 NONE
 IUJ48_24075 5262647 .. 5262664 + -14.1  -5.27335   CGCGTCCCCTACCGA             CCCCCGG CTTG CCGGGGG              TTTTTCTTTGCGCGC 100 68
 IUJ48_24080 NONE
 IUJ48_24085 5265398 .. 5265416 + -11.7  -4.74801   GCCGACATGAAAAAA             GCGGACC AGCCG GGTCCGC             TTTTTCGTGGCGTTA 100 47
 IUJ48_24095 5267168 .. 5267206 +  -2.4  -3.72576   TGATGGGTTCGCCGC  GCATC-AGCCGGGCGACC TTGCC GG-CGATCTGCTCGATGC  TTTCGTCGCGCAGCG  53 66
 IUJ48_24130 NONE
        ybgC NONE
        tolQ NONE
 IUJ48_24145 NONE
        tolA 5277694 .. 5277704 +    -4  -2.71011   ATCATTGACGTTGTG                 TACA GAA TGTA                 TGATTGACAGGAGAT  42 8
        tolB NONE
         pal 5279613 .. 5279642 + -21.5  -4.96501   AAGTGCCCCACCACG       CGTCGGGACGGTC AGCC GGCCGTCCCGACG        TTTGTTTTTATCCCC 100 56
        ybgF NONE
 IUJ48_24170 NONE
 IUJ48_24175 5282619 .. 5282639 +  -8.1  -4.13014   CTTCGCAGCCCAGCC            CCGCGGCCG CTT CCGCCGAGG            TTTTGCCGGTCTGCG  73 444
 IUJ48_24185 5283710 .. 5283738 + -10.3  -2.71681   GCGCGGCTGACCCCG       CGCGCCGTCAGG GTTCGA CC-GACGGCGTG        TGCTTGAGGCGCTTG  59 31
 IUJ48_24195 5285406 .. 5285427 + -17.3  -2.71011   GCGAGAAAGAAAAAA           GGGCCACCC GCGC GGGTGGCCC            TCGTTACGGGCAGCT  84 44
 IUJ48_24220 5291277 .. 5291293 +  -2.2  -3.14878   GCCGCGCGATCGTTG              GAGTCA AGAAA TGACGC              TGTTCCCTTCCAGCC  42 12
 IUJ48_24225 5292054 .. 5292071 +  -2.5  -3.01712   GCCATCACCATCACC             AGGCCCG CCAC CGCGCCC              TCTTCGGCCGCCAGC  41 148
 IUJ48_24240 5294095 .. 5294114 + -10.6  -3.97042   TATGCTGGCGGCGCG            ACCGCGCC CGTC GGCGCGGG             TTTCATTGATCATGC  78 66
 IUJ48_24245 5295079 .. 5295092 +  -9.5  -3.17075   ATCGGGCATGCGTGC               CCGGC GTTC GCCGG                TTCCCTTCCCGGCCC  60 91
 IUJ48_24250 NONE
 IUJ48_24255 NONE
 IUJ48_24260 NONE
 IUJ48_24265 NONE
 IUJ48_24270 NONE
 IUJ48_24275 NONE
 IUJ48_24280 5302122 .. 5302136 +  -4.2  -4.46112   GGCTTGCGTCATGAC               CCACCT CTG AGGTCG               TTTGTTTCAGTGACC  71 495
 IUJ48_24290 5303085 .. 5303099 +  -9.2  -3.59979   CTGCAAAGCCTGACG               CGGGCC TAG GGCCTG               TTTACGCTGAAAGGC  68 17
 IUJ48_24300 5304864 .. 5304886 +  -9.1  -3.30124   CGCAGACGCGCACCA          GGCGCGGCGC CAGG GCGTCG-GCC           TTGTCGCGGCTCGCG  59 497
 IUJ48_24315 5307765 .. 5307782 +  -8.3  -3.45366   CTTTCCGCTCTGACC             GGCGCGG CACG CCCCGCC              TTCGTTCGTTGCCGC  62 28
        gltS NONE
 IUJ48_24325 NONE
 IUJ48_24330 NONE
 IUJ48_24335 5311835 .. 5311854 +  -9.3  -3.45945   GCGCAAAACAAAAAA            GCCAACC GGCTAA GGTTGGC             TTCATTGTCGCTCGG  65 469
        gloB NONE
 IUJ48_24380 5320876 .. 5320905 + -13.5  -4.36914   GATCGATACGCTTCA       TGCAGCGGCGCCC GCAA GGGCGCCGCTCTG        TTTTGTCCGCGAAAC  95 48
        fabI 5322252 .. 5322286 +  -8.5  -3.89346   GGGCGGGGTTCCTCG    CGTTGC-GG-GCGGCAC GAC GTGCCGCTCCTGCCCCG    TTTGTAGCATCCGCG  69 513
 IUJ48_24395 5323121 .. 5323155 + -25.7  -4.38171   CGCGCCAGCCCGCAG     CGGCGGGGCCAGCGG CACAA CCGCCGGCCCCGCCG     TTTTCATGTCCTGTC 100 53
 IUJ48_24415 5326767 .. 5326792 +  -4.6  -4.11216   AGTTCAGGTTCGACA         TGTCGAGCAC GAAGCG GTGCTCGCCC          TTTTCCACGTGCGAC  66 239
 IUJ48_24425 NONE
         alr 5329177 .. 5329192 + -11.8  -3.05844   AGCACCGCGGCGGCG              GCGGCC AGCA GGCCGC               TGTTGAAGTACAGGC  62 393
 IUJ48_24440 NONE
 IUJ48_24445 5334818 .. 5334831 +  -9.5  -3.10715   GCCGACGAGCCTGAC               CGGGG TCCG CCCCG                TTGCCTGCTGCTCCC  60 184
 IUJ48_24460 NONE
 IUJ48_24465 5339868 .. 5339878 +  -8.2  -3.02144   CCTCGCGCGCCACCT                 GGCG CAG CGCC                 TGTTCGAACACGTCG  56 94
 IUJ48_24485 5343341 .. 5343360 + -11.4  -4.07885   CGGGGTAAAGAAAAA            GGGGACGT TATT GCGTCCCC             TTTTGCCGCAGGCTC  81 305
 IUJ48_24510 NONE
 IUJ48_24515 5353165 .. 5353193 +   -11  -2.53382   CACCGCCCGGCGCGG       CTG-GCGCGGCGT CTGC ACGCTGCGCACGG        TCAGTTGCGGATCGT  58 511
 IUJ48_24525 NONE
 IUJ48_24530 5355609 .. 5355626 +  -8.3  -2.84098   CAATCCGCGCCCCTC             AGGCGCC GCGC GGCGCCC              TCATTCCTTGCGCAG  55 55
 IUJ48_24545 5358447 .. 5358466 +   -15  -4.77036   CCGGGAAATAAAAAA            GGGCCGCA TTGA TGCGGCCC             TTTTTGCTGATCGCG 100 65
 IUJ48_24560 5362140 .. 5362168 + -16.8  -5.40072   TCACGCATCCGCAAG       GCGGCCCGCGCAT CTCG ATGC-CGGGCCGC        TTTTTTTACAGGCGG 100 53
 IUJ48_24565 5363326 .. 5363347 + -15.9  -5.60993   CCCGCACGACAAAAA           GCCCTTCGG AAAA CCGAAGGGC            TTTTTTTGTGGCCGA 100 50
 IUJ48_24630 NONE
 IUJ48_24635 5376055 .. 5376069 +    -7   -4.0371   CTCCGGGCCGTTCGC               ACGGGG ATT CCCCGC               TTTGTATACCAAGTG  67 87
 IUJ48_24640 NONE
 IUJ48_24645 NONE
 IUJ48_24650 NONE
 IUJ48_24655 5379949 .. 5379993 +  -6.2  -3.15544   CGCGTATTCCGCGCC GCGCCCGTCGGGGTTGCGCA GGTAG TGCGCGAAGCCGACCAGCAC TTCGTGCGGATGGCC  50 304
 IUJ48_24665 5383709 .. 5383735 +   -15  -5.14563   TCCGCCCACGAAAAA         GCCCCGTCCGGC CTG GCCGTTCGGGGC         TTTTTTCATCGCGCA 100 48
 IUJ48_24685 NONE
 IUJ48_24690 5388945 .. 5388964 + -10.6  -4.56597   CCCAAATGCCAAAAG            GCGGCCGC CCGC GCGGCCAC             TTTTTGGCGACCCCG  89 243
 IUJ48_24700 5393404 .. 5393431 + -22.8  -2.67803   CTGAGCGGCATTCTC        CTGGGCGCGCCT TGCT AGGCGCGCCCAG         TGCATTTAGTAACAA 100 50
 IUJ48_24705 NONE
 IUJ48_24710 5398101 .. 5398140 +  -9.9  -3.80625   TGCGCCGATGAATAG  CCCG-GGCACGGTTCGCC TTGTT GGCGGATCGGGGCACGGG  TTTAAGTTCTGGGAC  71 293
 IUJ48_24715 5398845 .. 5398866 + -17.3  -5.27335   CAGCAGTGCCTCAAA           CCGCCTGGC CTTG GCCAGGCGG            TTTTTATTTCGGGCC 100 59
 IUJ48_24720 5399725 .. 5399747 + -16.2  -2.70932   ACGGAACCATGTAGG           GCGGCAGGCG CTG CGCCAGCCGC           TCCTTCCAACCCGAC  74 200
         mpl NONE
 IUJ48_24795 NONE
 IUJ48_24800 5415588 .. 5415603 + -11.8  -2.55074   TGCCTCATCCTCGTT              GCCGCC TGCC GGCGGC               TGCCTTCGGATTCCG  64 186
 IUJ48_24805 NONE
 IUJ48_24810 NONE
 IUJ48_24815 5420825 .. 5420875 + -12.3  -2.88544   CGTAGCACCGCCGCC CGCCAGGC-CGCCCGCGGGCCGGG TGTT CATGGCCCACGGGCGCGGCCCGCG TCTATCGAGATAACA  66 98
 IUJ48_24820 NONE
 IUJ48_24825 NONE
 IUJ48_24830 NONE
        aroE NONE
        mtgA 5426325 .. 5426347 +  -4.6  -4.23104   CCATCCGGACCGGTT           CCCGCCCACC TTG GGCGGCCGGA           TTTGTTAAGCTTTCA  68 53
        lptG NONE
 IUJ48_24850 5428696 .. 5428747 + -19.4  -3.76775   GCAGGGAATGGAATC TGCGGGGCTGCCAGTTGCGGCCGC GCGG GCGGCCACAACTGGCGTCTGTGCA TTTGACTGTGTTGCG 100 324
 IUJ48_24880 5435625 .. 5435640 + -11.8  -4.14392   GGCCCGCCGCAAGCC              GGCCGC GCGG GCGGCC               TTTTGCGGCTTACGC  85 329
 IUJ48_24915 NONE
 IUJ48_24920 NONE
        hemL 5443520 .. 5443552 + -13.3  -4.96848   GAACGCGCTGCAACA      CGCCCTGGCGGCCCT GGA AGGGCTTGCGGGGCG      TTTTTGTATCCAGCC 100 78
 IUJ48_24935 5446667 .. 5446699 +    -9  -3.61398   GAAGTGCGCGCCGAC      CGCGTCGGCGGCTT CGCGC GAGCCGCCGGCCAG      TTGTTCGACCGACGG  63 348
 IUJ48_24970 5453981 .. 5453994 +  -5.2  -2.56095   GGCCCATACTCAAGC               CGGC ACAACA GCCG                TAACTTCAATCTCCA  43 503
 IUJ48_25060 5475114 .. 5475132 +  -5.3  -2.75039   AAAACGGCAACGCTT            TGGC-GCA TAAT TGCCGCCA             TGATTCCGGTATCTC  44 118
 IUJ48_25065 5476241 .. 5476263 +  -7.6  -3.10894   GAAGCTTTCCCCCGC           GCGCCGCC TTGCCCT GGCGGCGA           TTCCGTCCTGCTCAT  55 94
        argJ 5477770 .. 5477798 + -13.8   -3.1855   CGATGCCCGCGAATG       CGACGCGGGCCCG GTGC CGGGCCCGCC-CG        TTCGCTCTTCCAGGA  78 275
 IUJ48_25075 NONE
 IUJ48_25080 5479666 .. 5479705 + -15.6  -5.82316   GCGCAGGCGGGATCG  CCGGCCCGCCGC-CCTGTC CAT GACCGGCGCGCCGCGCCGG  TTTTTTTTGCGTCCT 100 49
 IUJ48_25085 NONE
 IUJ48_25090 NONE
 IUJ48_25095 NONE
 IUJ48_25100 NONE
 IUJ48_25105 NONE
 IUJ48_25110 NONE
 IUJ48_25115 5487452 .. 5487466 +  -2.7  -4.08216   CCATCCGGCGTCGTC               GGCGC ACGCC GCCCC               TTTTCCGGAGCATCA  58 47
 IUJ48_25120 5488951 .. 5488961 +  -6.8  -3.14344   TCAGGGCCGGCGATT                 GCAG CGC CTGC                 TTCATCGCCGCGATC  50 242
 IUJ48_25165 5502600 .. 5502640 + -22.6  -4.27316   ACCGAAGACCTGCCA  CCACAGGGCCCGCCGGAC ACTCC GTCCGCCGGGCCCTGTGC  TTTTCGGTTGGCAGG 100 70
 IUJ48_25190 NONE
        glpK NONE
        gtdA 5511030 .. 5511059 +  -6.2  -3.75897   AACGCACCGCCTGAA       GCGGGCGGGCCG CGGCGC CCGCCCTCCCCC        TTTCCGTTCCGCCTT  60 27
 IUJ48_25215 NONE
        maiA NONE
 IUJ48_25225 NONE
 IUJ48_25230 5513839 .. 5513864 + -11.1  -3.53012   CAATAAGAAGGCCTG         TGAACGGGCGGC CTC GCCGCCCGG-CA         TTTCGCAACACAGCA  72 35
 IUJ48_25235 NONE
 IUJ48_25240 NONE
 IUJ48_25245 NONE
 IUJ48_25250 NONE
 IUJ48_25255 NONE
 IUJ48_25260 NONE
 IUJ48_25265 5521038 .. 5521094 +  -6.4  -2.52464   CCGAACTGGCCCAGC GCTACCTGGGCGTGTGAGGCGCGCGGC CCTG GCCGCGGGGTTGACGGGCTCAG-TCGC TCGATTCGCAGAAGG  47 9
 IUJ48_25275 5521977 .. 5522028 + -19.5  -2.53263   CGCCCGACGGACAGG GGCGGCGTCAGGCCTGGCGCGTGCCC GAC GGG-ACGCGCCAGGCACG-C-CCGCC TCAGTTCAGGCTGGC  89 108
 IUJ48_25305 NONE
 IUJ48_25310 5529498 .. 5529510 +  -4.7  -3.14848   TTCTGAAAAGGGCAC                CGGTC TTC GTCCG                ATTTTCCTGAAGGCC  47 35
        cheD 5530687 .. 5530728 + -10.8  -3.08679   GGCAGCTGACGCGCG CCGCCTCAGC-CCGCGCCGC CCGG GCGGC-CGAAGCTGGCGCGG TATTGGCTGGGCGAC  63 32
 IUJ48_25325 5533078 .. 5533088 +  -8.2  -3.62046   CCCGCAGCATGCCGG                 GGCC GTA GGCC                 TTCTTGACCAGATGG  63 457
        mutY 5537680 .. 5537698 +  -7.3  -3.53012   CCAAACGCCAAAGAA             GGCCGCC CGCGC GGCCGCC             TTTGGCGACCCCGCA  60 92
        iaaH 5540421 .. 5540454 + -19.5  -2.62184   ACGAAACGCTCGTCG     CGGCCCAGGTCGCCG AACA CGGCGGCCAGGGCTG      TCATCTCGCGCGCCC  82 169
 IUJ48_25400 NONE
 IUJ48_25405 5556619 .. 5556642 + -10.2  -3.34398   GATCAGCCAGCCCCC          GCGGGTCCCGC TGC GCGCG-CCCGC          TCTTTGAAGCACCGC  67 233
 IUJ48_25410 NONE
        thiD 5558295 .. 5558316 +  -4.3  -2.75064   GGTGCACCACTTCCA           CGCCTGGTG GTGA TACCGGCCG            TCATTGCGTCCGAAA  42 13
 IUJ48_25420 5559155 .. 5559193 +  -2.9  -3.05384   GGGCCTTGCGGCCCC  GCCGCGCCGGTCCGGCCCG CCA CGGGCCC--CCGCCCCGGA  TTCCCTGGAGCAGCA  43 51
 IUJ48_25425 5560791 .. 5560815 +  -9.9  -3.09803   CACCGTGACGAAGCC          CAGCGCCGC CAGCAGC GCGGCGCGG          TCTTCCATGCGGTTC  59 257
        phoB NONE
        phoR 5568757 .. 5568786 + -15.7  -2.52543   GGCGCGCCACGCGCA       TGATCCGCGCCGC AACC GCGGCGCGGATGG        TAAATTCCCGGCCAT  77 47
 IUJ48_25470 NONE
 IUJ48_25475 5570898 .. 5570911 +  -9.5  -4.26903   ATCTTCGCGACAGAA               CCGGG TCAC CCCGG                TTTTCCTAAAGTGCC  81 40
 IUJ48_25480 NONE
 IUJ48_25485 NONE
 IUJ48_25490 NONE
 IUJ48_25495 5574744 .. 5574764 + -19.7  -3.30159   CCCCGGGGATGCTCC            CGGCCGGGC GGC GCCCGGCCG            TTCTGAAACAATTCA 100 47
        serA 5576090 .. 5576107 + -14.1  -4.18494   GGCGCTCAAGAGAAA             GGCCCGC TCGC GCGGGCC              TTTTCCATGCGCGTG  93 47
 IUJ48_25515 NONE
        pxpB NONE
 IUJ48_25525 NONE
 IUJ48_25530 5580933 .. 5580958 + -18.3  -2.89742   TGACGCAGCAAGGAC         GCG-CCGGCGCC TCG GGCGCCGGACGC         TGTCTCGCCGTTACG  89 78
 IUJ48_25545 5583996 .. 5584042 +  -4.9  -3.61398   AGCGCGACATGACGA GGCCGCCGGCAAGGGCGCCGAC GACG GTCG-CGGCCATGCCCATGACC TTGTTGACCGCGCCC  54 473
 IUJ48_25570 NONE
 IUJ48_25575 NONE
 IUJ48_25580 NONE
 IUJ48_25585 5591712 .. 5591726 +  -2.8  -2.87344   CTCCCTGACAGGAAG               GATATG GCT CACATC               TATCTGGACGAACTC  41 53
 IUJ48_25590 NONE
 IUJ48_25595 5593893 .. 5593903 +  -2.4  -2.64616   GACGCCCGGCAGCAG                 CCGC ACC GCGA                 TGGTGTGCATGACAA  38 512
 IUJ48_25605 5594724 .. 5594742 +    -8  -2.54896   CTCAGGAATTCGCGC             GCCCGCTC CTC GGGCAGGC             TGGCTTCGGTGCCCG  48 52
 IUJ48_25615 NONE
 IUJ48_25620 5597772 .. 5597789 +  -4.1  -2.93361   ACGCCGCGCTGAAAG             CGCCT CGCAAATA AGGCG              TATCGTTAAGGTTTT  44 12
 IUJ48_25625 5598397 .. 5598438 + -15.7  -2.71011   CCGCCATGGCCCTGG GGCGGAGGGCGGACTCGGC GCGC GCCACGTCCGCCCTCCTCG  TCATTCGACCGCCGT  78 77
 IUJ48_25695 5611762 .. 5611772 +  -2.4  -5.08169   GAGAGTGGAGCTAGG                 GAGG TGG CCGC                 TTTTTTCGCGTCTGT  79 154
 IUJ48_25710 5615341 .. 5615391 +  -7.4  -3.14132   CAAGCTGGCGCGCAT CGCGG-CGGCGCTGGCCCGGGGCTG ACCA CTGCCCGCCGCC--CGCCGCCCGCG TTGGTGCGCGGCGGG  55 1
 IUJ48_25715 5615957 .. 5615986 +  -4.1  -5.00884   GCGGACCCACGCGCA       CGCGGGCCTTGCC TCTA GGGAAAGCCCGTA        TTTTTTGCGGACGAT  82 58
 IUJ48_25720 5617182 .. 5617216 + -10.7  -3.25823   TGCGCACCAGCTCCT    CGGCCACC-GCCCTGGC CAC GCC-GGGCAGGTGGATG    TTGATGTCCGCGGAC  66 119
 IUJ48_25740 5620630 .. 5620647 +  -6.3  -3.54475   CGTCCGGACGTTGGA             CGCGTGTC CGT GACAC-CG             TTATATAATCCAGCG  55 232
 IUJ48_25750 5621735 .. 5621756 + -15.9  -5.63517   CGGGCCCGAAAAAAA           GCCCCTCGA TGCA TCGAGGGGC            TTTTTTGTTTCCGGC 100 76
 IUJ48_25775 NONE
 IUJ48_25780 5629246 .. 5629262 +  -9.4  -3.03124   CGCACAGCGACACCA              GGCCGA TACGC TCGGCC              TCTTCGCCGCTCACG  55 398
 IUJ48_25790 5630849 .. 5630867 +  -2.5  -2.90496   ACGCGTTGCTTTTGA            TT-TAGGG TTAT CCCTATAA             TGGTTTACCCCAAGA  40 92
 IUJ48_25795 5631339 .. 5631397 + -29.6  -2.60032   CCACGACGCAATTCC CCCGTCGCCCCAGTGCGAAGCCGTCCCG AAG CGGGACCGCCTCGAACTGGGGCGATTGG CATTTTTCGCGCGGC 100 227
 IUJ48_25800 5633257 .. 5633289 + -19.3  -3.86346   ATCCGGCGCGGGACA      TGAAAACGGCTGCCC TCG GGGCAGCCGTTTTTG      TTTGTGCCAGCGTCC 100 40
 IUJ48_25810 NONE
 IUJ48_25815 5636866 .. 5636893 +  -9.7  -2.62184   TCGTCTGATTCTTCG        CGCGGCGCGCC CTCGAT GGCGCGGCGCC         TCATATAAAAAAACA  55 33
 IUJ48_25820 NONE
 IUJ48_25825 NONE
 IUJ48_25830 NONE
 IUJ48_25835 NONE
 IUJ48_25840 NONE
 IUJ48_25845 NONE
 IUJ48_25850 5645017 .. 5645047 +  -3.1  -3.57792   AGCATGACTTCCTTG      GCCTGCG-TGTAGG CCTC CCAGCGGCGCCGGC       TTTCAAGGTCCATCG  50 336
        dapD 5647270 .. 5647291 +  -7.2  -3.57263   TGCGTCAGCACCAGC           TTGCGCGC CACGGC GCGCGCCA            TTTCCGCCTCCAGGT  60 446
 IUJ48_25870 5649033 .. 5649062 + -17.9  -3.72576   AGACCGTCATGTTGA       TCGGCC-GCGCCAC GCC GTGGCGCCGGCCGG       TTTCCTCGACCGCCC  95 282
 IUJ48_25880 5651042 .. 5651062 +  -4.6  -2.52623   CTCAGCCCGCACAGC           CGGGCCAGG TCTT CCA-GCCCG            ATCTTGTCGCCCAGA  42 288
 IUJ48_25965 5671199 .. 5671232 + -20.3  -3.28979   GATCTTGCGGGGCCC     GCCGCAAGCGGCCGC GCGG GCGGCCTTTTGCGGC      TTACGTTGTGTCTTG 100 346
 IUJ48_25995 5676573 .. 5676600 +  -6.2  -3.77196   CCGAGCGAGAGGATC        TCGTTGGCGTTG ACGA TGGCGCCGGCGA         TTTCCTCGGTGGTGA  60 51
        folB NONE
        ttcA 5691627 .. 5691660 +  -3.6  -4.72272   AAAACGCCCCCTTGG     GGGGCAGCAAGCCG AAGGCG CGGCGTGGGGGCCC      TTTTTCATCGCCGAG  75 101
         rpe NONE
 IUJ48_26105 5698306 .. 5698332 + -10.1  -5.24796   AGAACACAGAGCCAA        GCCCGGAACCAG TAAC CTGGA-CCGGGC         TTTTTGTTGTGTGCC 100 221
 IUJ48_26110 NONE
 IUJ48_26115 NONE
        trpD NONE
        trpC 5702364 .. 5702382 +    -8  -3.12351   CCTGGTCGGCTGAGC             CGCACCGC CGC GCGGCGTG             TTCAGTGTGGACGCG  55 28
 IUJ48_26135 5706011 .. 5706024 +  -3.8  -4.30987   CTGGTGAGCTACTCG               CCCA AGAAAC TGGG                TTTCTTCTGACCCAT  66 2
 IUJ48_26140 5706679 .. 5706694 +  -3.2   -4.8622   CATGGGTGCGCCGCG              TAGCGG ACTG CTGCTG               TTTTTCATTGCGGGA  81 203
 IUJ48_26160 5708794 .. 5708815 + -17.3  -3.06261   ATCCCCGCCATGCCG           GCGCCTGGC GATC GCCAGGCGC            TCTTGCGGCTTGGGC  88 61
 IUJ48_26165 5711501 .. 5711521 +  -3.2  -2.87132   TGGCGGTCAGCCCCG           CGCCGCGAG CCAT CTC-CAGCG            TATGTCCCAGCAGGC  42 401
 IUJ48_26175 NONE
 IUJ48_26180 5714230 .. 5714243 +  -3.7  -4.12902   ACCGCGCCAGCTGGG               CGCGC GCTT GCGGG                TTTTCGACGTCCTTG  63 207
 IUJ48_26225 5726278 .. 5726314 + -14.4  -3.55563   GGCCCCGCGAAGAAA   CCCTGACAAAGGCGCCG GCGA CGGCGCCA-TGACAGGG    TTTCGCCACTACCAT  81 20
 IUJ48_26230 5727079 .. 5727102 + -12.4  -4.56597   TGACCGGACATGAAA          AAACCGGGCC TCAA GGCCCGGTTC           TTTTTGGCGACGGCG 100 246
 IUJ48_26330 NONE
 IUJ48_26335 NONE
 IUJ48_26340 NONE
 IUJ48_26345 NONE
 IUJ48_26350 5752909 .. 5752960 +    -5  -4.36914   TCCGAACGCGGTACT GGATTG-CGGGCAGGGGCGGGCCTA TAC TGGATTCGCCCTTGCTGGACGTTCC TTTTCTCAAAGGAGA  70 72
 IUJ48_26355 5753768 .. 5753780 +  -2.6  -2.82623   CCAGTAGAGCGTCAC                CGGC GGGCA GTCG                TCATTGTCCAGCAGC  40 374
 IUJ48_26380 5759036 .. 5759050 +  -5.6  -3.05384   GGCAAGGCGCTGTGG               GCCGGT TGA ACCCGC               TTGCGTCCGCCACCG  49 17
 IUJ48_26385 5760132 .. 5760144 +  -7.7  -3.28924   CTTCAGCGACACCCG                CAGCA GAT TGCTG                TTCTCGGGCGCGCTG  55 322
 IUJ48_26410 5762251 .. 5762286 +    -9  -4.23434   GGGCGCGCGACAGAG    C-CGCGGCGCTCG CAATGATGGGC CGGGCGCCGCGCG    TTTTCAGGTGTTTTG  77 74
 IUJ48_26420 NONE
 IUJ48_26425 5764435 .. 5764463 + -11.5  -3.01712   GCGCAGGCCGCGCGC        CGCGGCTGCCTCG TCC CGCGGCTGCCTCG        TCTTAACCCGGACCC  65 54
 IUJ48_26430 5766224 .. 5766238 +  -2.8  -2.78463   GATTTTCGCTGCGCC               GCGA ACCCGAA TCGC               TCTGATCCGCGAGGT  40 6
 IUJ48_26435 5768561 .. 5768586 +  -3.9  -3.99374   TGTTGGCCACCGAAC         CGCCGTTGAGCG CCA CGG-CAAAGGCG         TTGTTGTTGGTACAG  60 266
 IUJ48_26460 5774816 .. 5774834 +  -4.5  -4.75309   CCGCCGATGCGCCGG             CGGCG CGTTGAAAT CGCCG             TTTTATTGCGTTTAA  78 15
 IUJ48_26465 5776591 .. 5776603 + -10.5  -3.25823   CCCTGCCGGCCTGAC                CGGCC GCG GGCCG                TTGATCTCCGGCGAC  65 27
 IUJ48_26500 NONE
 IUJ48_26505 5785700 .. 5785729 + -24.3  -4.21812   CCGACCGACGTCCCC       GCGGGCCCGGCGT TTGC GCGCCGGGCCCGC        TTCTTTTGCATGACA 100 45
 IUJ48_26510 5787818 .. 5787838 +  -8.1  -3.92075   GGGCCAGGTCCTGGC            GCGGCAGCG CGG CGCGCCCGC            TTTCTGCGTAGACCT  67 69
 IUJ48_26545 NONE
 IUJ48_26550 NONE
 IUJ48_26555 NONE
 IUJ48_26560 NONE
 IUJ48_26565 NONE
 IUJ48_26580 NONE
        panB 5806078 .. 5806090 +  -3.3  -3.53012   TTTTATCGCTAGAAT                CAAGC CAT GCCTG                TTTCCCGCGCCCGCC  49 56
 IUJ48_26590 5807533 .. 5807552 +  -7.2  -3.06501   ACGGTGAAGTCCGCC            GGC-ATCTG CTG CAGATCGCC            TTCGATGCGGGTCTG  52 336
 IUJ48_26600 5809877 .. 5809914 +  -9.7  -3.14564   AGGGGCGCGGCGCGC   CAGGCCGGC-GCCAGCTG CAC CAGCCGCCCGCTGGCCAG   TTCATCCCGCAATGC  60 177
 IUJ48_26610 5812191 .. 5812205 +  -8.6  -3.91144   TTTTTAACCCATAAA               TGCTCA TAT TGAGCA               TTTATACGCTATGGA  69 173
        nadA NONE
        nadB 5815393 .. 5815409 +  -6.5  -3.14881   GCGCGGCCGGCAACT              CGTGGAT TTC GTCCGCG              TTGGTCAGGCCATTC  50 459
 IUJ48_26650 5820218 .. 5820263 +   -11  -3.40899   CGGCGGCGCGGGCAT GCCGAGCGGC-ATCGCCCGCGC CCCT GCGCGGCCGGGCGCAGC-CGGC TTATGATGGCCCCTT  70 47
 IUJ48_26655 5821072 .. 5821104 +  -5.3  -3.15544   CGCCGATGCCGCGGC      CTCCGGCCGCGCCAG CAG CTCGCGCAGACAGGG      TTGCTCGCGCTCGAC  47 286
 IUJ48_26710 5832440 .. 5832454 +  -9.2  -2.87132   TCTTACGGGCACTGG               GCCGCG CCG TGCGGC               TCTCTGGAACCAAGA  58 162
 IUJ48_26715 5833583 .. 5833604 +  -4.3   -4.2092   GCGGAAAGTCGCGTC           GGGCGTTGT CGAG ACACCGACC            TTATTTCTCGTTTTC  66 105
 IUJ48_26725 5836328 .. 5836347 +  -4.8  -3.90112   CACCGCGCACAGCAC            GCCGCGCC CGTC GGCCAGGC             TTTCCTTCAGGCCGC  60 236
 IUJ48_26760 5843696 .. 5843730 +  -9.1   -4.7373   GATCCACCGTGATCA     GCAGCACCTGGACGC GCTCG GCGTCCGGGCCCAGC     TTTTTCATGACCTCC  87 391
 IUJ48_26790 5847762 .. 5847774 + -10.5  -3.53012   AAGCGAAGGGCGAGG                CCGGC GGC GCCGG                TTTCCCGGCGGCCCG  69 102
 IUJ48_26815 5853131 .. 5853182 + -15.1  -2.68546   TGAGCCGGCGACGCG GGC-TGGGGGTCAGGCGCTGGCGCC GCCC GGCGCC-GCGCCCGATTCACGCGCC TGGATTTCATCCGTT  75 38
 IUJ48_26825 5857278 .. 5857296 + -17.4   -3.6682   CGACGCAAAGCAAAA             GGGCCGCG AAT CGCGGCCC             TTTGCATGGGTACGG  93 361
 IUJ48_26845 5861115 .. 5861128 +  -9.5  -4.73388   CCACTTCCTGACACA               GCGCC TTCG GGCGC                TTTTTCATGGCCGTT  91 30
 IUJ48_26850 NONE
 IUJ48_26855 5867700 .. 5867727 +   -17  -4.59414   CCCGCCAGACGGCAA        TGGCCGGCTTCC TTGC GGGAGCCGGCCG         TTTTGCTTCTTGTCG 100 47
 IUJ48_26890 5874793 .. 5874826 +  -3.7  -4.10657   GCGCTGCAACCACGC     GCCGTGTCGCGGCTTG ATA CACGTCAAGAC-CGGC     TTTTCCCGCCTCTGC  62 63
 IUJ48_26895 5875576 .. 5875592 + -13.7  -3.78775   CAGTAGCTGCTGCAA              CGCCTGC AAT GCAGGCG              TTTCGTCGTCCGCGC  82 76
 IUJ48_26905 NONE
 IUJ48_26910 NONE
 IUJ48_26915 5879803 .. 5879830 + -12.7  -3.65046   GAACGCCGGGCGCAA        TCCGAGGACGC GCCAAA GCGTCCCCGGA         TTGTTCCCGTGGGCG  81 49
 IUJ48_26920 NONE
        mlaE NONE
        mlaD NONE
 IUJ48_26935 5883082 .. 5883108 +  -3.1  -3.35679   GCCAGCGCCGGTTCC        CGCAA-CCAA GTAAGCTG TTGGATTGCG         TTATCAGTACAGCAA  47 13
 IUJ48_26940 5883781 .. 5883815 + -24.3  -4.17048   TCCGTCCGATCCGCC     TCGGCCCGGCGCGCC CTTGC GGCCCGCCGGGCCGA     TTGTTTTGGGGACAA 100 44
 IUJ48_26945 NONE
 IUJ48_26950 NONE
 IUJ48_26955 NONE
        murA NONE
 IUJ48_26965 NONE
        hisD NONE
 IUJ48_26975 NONE
        hisB 5890763 .. 5890780 +  -4.8  -2.63715   GCATGGGCGACGTCG             TGCCCT CGACCA AGGGCG              TGCTGTAACCTCCGT  43 0
        hisH NONE
        hisA NONE
        hisF NONE
        hisI NONE
 IUJ48_27005 NONE
 IUJ48_27010 NONE
        tatA 5894547 .. 5894570 + -10.9  -2.76189   CCTGCGCGCCCCCCG          GGCCCGGCC TGATCC GGCCGGCCC           TCATTGCCTCAATTC  62 44
        tatC 5896007 .. 5896026 + -12.1  -4.06904   GTGCCCGGACATGAA            GGGGCCC CGATGC GGGCCCC             TTTGTCATTCCATAA  84 45
 IUJ48_27030 5896747 .. 5896759 +  -6.9  -3.12351   CGGCGATGATCACGC                CGCGG GCG TCGCG                TTCCATCTGGAACGC  50 291
 IUJ48_27040 5898627 .. 5898646 +   -15  -4.07568   GCACGTATGCCAAAA            CCGGCTGC CCGC GCAGCCGG             TTTTGGCGGGCAACA  95 179
        petA 5900194 .. 5900213 +  -5.6  -5.03145   GATGAAGACAACAAG            GCCTGACG CTCG CGTCGCGC             TTTTTTCCCGAATTA  87 20
 IUJ48_27055 NONE
 IUJ48_27060 5902636 .. 5902666 + -13.3  -4.35327   CCGCCTGGCAATCGG       GGCCAGCGCCT GCTAGATTA GGGCGCTGGCC       TTTCGTTTTTCATAA  95 120
 IUJ48_27065 NONE
 IUJ48_27070 5904004 .. 5904018 +  -3.4   -4.2679   GAATCGCGTCTCATA               CGCCTG AAC CGGGCC               TTTTCCTGCGCGTTG  64 267
 IUJ48_27075 5904806 .. 5904825 +  -6.4  -2.56596   CTGCGCGTGCCCCAG            GC-ACGCCG CGC CGGTGTAGC            TCAGTTGGTAGAGCA  47 113
 IUJ48_27080 5904909 .. 5904928 + -12.1  -4.73682   GCACCCAATGAAAAA            GCCCGGC CGAACA GCCGGGC             TTTTGTCTTCTGGCG 100 44
 IUJ48_27090 5906649 .. 5906671 + -19.2  -4.18197   AATGCAGTACTGAAA           GGCCCGCAAC CTG GTTGCGGGCC           TTTTGCATGGGCGCT 100 44
 IUJ48_27095 NONE
        gcvA 5908171 .. 5908191 +  -3.1  -2.82923   GCGTGGCTGGCGCAG            GCGGCGGCC GAC GGTTGATGC            ATTACTTTTACTCAT  41 8
 IUJ48_27105 5908777 .. 5908800 +  -9.4  -4.72272   CCCGCCTGATGCCCC          GGCGCCGGAC GCAA GCCCGGCGCG           TTTTTCCTGGAACCC  91 32
 IUJ48_27110 5910422 .. 5910451 +  -8.5  -3.04144   CGGTGAGCGGACGGA       TGCCGGCG-CGCTG CTG CAGCGACGACAGCA       TGTTGCCGGTGGAAA  55 421
 IUJ48_27120 NONE
 IUJ48_27125 NONE
 IUJ48_27130 5915016 .. 5915031 +  -6.8  -2.63079   TGCCCCGGCTCCCCG              TGGGGC CAGG GCCCTA               TCACTTCTGTCGCGC  47 177
 IUJ48_27135 5916686 .. 5916726 + -20.4  -3.14132   GTCCTGCCGTAGTCC CCGGGCGCCGCGCCACGCC GCAG GGCGTG-CGCGGCGCCGTG  TTGATGCGACCCCCG 100 29
 IUJ48_27140 NONE
 IUJ48_27145 NONE
 IUJ48_27150 NONE
 IUJ48_27155 5921740 .. 5921753 +  -9.5  -3.33696   GCAAGGCGGGAAGGC               GGCGC TGGC GCGCC                TTACTTCACGCCGCG  64 44
 IUJ48_27170 NONE
 IUJ48_27175 5927310 .. 5927343 + -31.1  -3.96216   CCTGAATTTCCACGC     GCGGGGCACGCGCCG GCAA CGGCGCGTGCCCCGC      TTGTTTCGATGCACG 100 36
 IUJ48_27180 NONE
 IUJ48_27185 5929786 .. 5929805 +   -15  -4.25283   GATCACGCAAAAAAA            TGGCGCCC CGAG GGGCGCCA             TTTTCATGCCGGGCT 100 69
 IUJ48_27200 5932859 .. 5932894 +  -9.6  -3.10012   CAGGTCGGAAAGCGA    CGTCGCGCCCGCGTCCA CGC TGG-CGCGGACTTGGCG    TTCGGTGATGGCATT  59 208
 IUJ48_27225 5935894 .. 5935917 + -13.8  -3.96483   CCACCGTTCGACGAC          CCAGGCCGCC GCAA GGCGGCCTGC           TTGTTTCAGTCCCCT  93 53
 IUJ48_27230 5937051 .. 5937073 +   -17  -5.27923   ACGCGTGTGACGCCA           GCCGGGGACG ATC TGTCCCCGGC           TTTTTTATCGCCTTC 100 40
        leuA 5939224 .. 5939244 + -11.1  -4.46854   CCGCACAAAAAAATA            GCCCGCC TTTATCC GGCGGGC            TTTCTTCTTGCGTGA  91 113
 IUJ48_27245 NONE
 IUJ48_27250 NONE
 IUJ48_27255 NONE
 IUJ48_27260 5945279 .. 5945289 +  -6.8  -3.15663   CAGCGCGAAGCCGAC                 CGCA TAC TGCG                 TTCCTACAAGTAAAT  51 2
 IUJ48_27265 NONE
 IUJ48_27270 5947009 .. 5947029 + -18.3   -4.4078   CCCTGGAAAGCAAAA            GACCCCGCG TGG CGCGGGGTC            TTTTCGTTGGGCGGC 100 46
 IUJ48_27285 NONE
 IUJ48_27290 5950576 .. 5950589 +  -3.8  -2.92449   TTGATTGAACTAATC               CAGG CCCGGC CCTG                TCTGTAACCTCTTTG  44 63
 IUJ48_27295 5951285 .. 5951309 +   -15   -4.7373   CCGCGTTCATGACGA         CGCCCCGCGCC GACC GGC-CGGGGCG          TTTTTCATGGGGTCA 100 53
 IUJ48_27300 NONE
 IUJ48_27305 5953583 .. 5953595 +  -4.7  -3.29144   GAGGCGTCAGCCCTT                GACCG CCG CGGCC                TTCTCCAGCGCCTGC  49 39
 IUJ48_27320 5956395 .. 5956407 +  -4.8  -3.17723   GCCGTCCGCGCCTGT                GCTG CGCGT CAGC                TTGCCTTCGAAATAC  47 167
 IUJ48_27330 NONE
 IUJ48_27335 5958325 .. 5958346 + -17.3  -3.76952   TCCGAAAATGAAAAA           GCGCGCTCC CCAT GGAGCGCGC            TTTGCGTTGCCTGCG  93 127
 IUJ48_27350 5961998 .. 5962010 +  -4.7  -2.71011   CGGCCGCGAGCTGTT                CGCCG AGA CGGCC                TGATTCGGCCCGAGT  44 10
        aceK NONE
 IUJ48_27360 5965197 .. 5965227 +  -3.8  -4.07568   CAAGCCCGCGTAGCG       GGCACACCGAGGGG CAT CATTTCGCTGCGCC       TTTTCCGCAAGGCGA  62 111
 IUJ48_27365 NONE
 IUJ48_27370 5969211 .. 5969243 + -18.5  -3.34398   CGGCGCCTGAACGCG      CGCGCCATCGCCG GCCTCCG CGGCGATGGCGTG      TCTTTCCACAAGGGG  93 31
 IUJ48_27375 NONE
 IUJ48_27380 5970563 .. 5970602 + -12.8  -3.09327   GCGCCCGAGCACCGG  CCGCCTGGCGGGAATCGA CTCT TAGTTTCCCGTCAGCCGG   TATTCCCTAGAATGC  72 46
 IUJ48_27385 5971906 .. 5971940 +  -9.2  -4.63218   GCCTGACCCTGGCCG     CATCGCCCGGCAACCA CGA TTGTTGCTGGGCGAAA     TTTTGTTGCGACGCA  88 35
 IUJ48_27390 NONE
 IUJ48_27395 NONE
 IUJ48_27400 5974355 .. 5974372 +  -8.3  -3.68351   CAATCGCAGCATGCC             GCACGGC CCTG GCCGCGC              TTTCCCTGGTGGCAG  65 109
 IUJ48_27410 NONE
 IUJ48_27415 NONE
 IUJ48_27420 5979524 .. 5979534 +  -8.2  -2.62184   CGACGCGGACGCCCC                 GCGC AAG GCGC                 TGGTATGAGCGCGCC  53 7
 IUJ48_27425 NONE
 IUJ48_27430 NONE
 IUJ48_27435 NONE
 IUJ48_27440 5983989 .. 5984019 +  -3.1  -4.32402   CGATGGCACGGCGGT      GATCGCCAG-CCGC TGAA GCGGCCAGGCGAAA       TTATTTTCATTCAGC  64 10
 IUJ48_27445 5986666 .. 5986721 +  -6.8  -2.77899   GCATCAGCACGTAGC TGGCGC-CTGGCTGCGTAGGC-ATGCG CAAGT CGCGTTGCC-GCGCCGTCCGCGCGCCG TCATTCCTGCGCAAG  48 160
 IUJ48_27455 5989154 .. 5989167 +  -5.2  -3.28712   ATGGCGCCGCACAAT               GCGC CTCGGT GCGC                TTATCGAAGACCGAC  49 112
 IUJ48_27460 NONE
 IUJ48_27465 NONE
 IUJ48_27470 NONE
 IUJ48_27475 NONE
 IUJ48_27480 5993098 .. 5993108 +  -2.4  -4.58395   GTCGCGCTTGATGCG                 CCGG GCC CAGG                 TTTTTAGGCGGTCGC  71 390
 IUJ48_27490 5994082 .. 5994105 +  -9.6  -2.81133   CGTCTGGGGATCGAC          TGAAGCCCAT TTTG ACGGGCTTCA           TGTCGTCCATGCGTG  58 515
 IUJ48_27510 5996091 .. 5996117 + -15.8  -3.60925   TTGGTGGCCTGGAAC         TGGCCTGACGCG TTG CGCGGCAGGCCG         TTGGTCTTTTTCGGG  90 78
 IUJ48_27520 5998558 .. 5998575 +  -3.5  -3.61715   AATGCCTCACAAAGA             CCAATGAC TCC GT-ATTGG             TTCTTAAAGAAAATA  51 43
 IUJ48_27525 5999075 .. 5999085 +  -2.4  -5.52384   AACAAGTTGCCGCGA                 CCAC CAC GGGG                 TTTTTTTCGTAAAAG 100 148
 IUJ48_27535 6001736 .. 6001763 + -19.2  -3.09671   CCCATCTACAAAACA        GGGGTGGTGGCA GTGA TGCCACCGCCCC         TGTTCACGTTCAGGT  93 153
 IUJ48_27545 6003283 .. 6003294 +  -7.2  -3.18033   GTAAGGCAGGCGCGC                GCGC CGGA GCGC                 TGTTCATGGCTTATC  54 37
 IUJ48_27550 NONE
 IUJ48_27555 NONE
 IUJ48_27560 6005609 .. 6005654 +  -3.7  -2.78463   CAGTGGCCCAGCAGC AGCCAGCCTTGCGGCAGGGACT GCA GGATCATGCCGCC-GGCGGGCA TCTGCTGCGGCGCAT  40 295
 IUJ48_27575 6009129 .. 6009147 + -17.4  -3.02511   CGCCGCGCCAGCGCA             GGGCCGCC TCG GGCGGCCC             TGTTCGCGCAATCAC  88 80
 IUJ48_27580 6011208 .. 6011261 +  -9.4  -3.79113   GACCGCATGAACCTT GGGGGTATTAAAGAGGGGCGGACCC CAAAA GGG-CCGCCCCGCCTGGAAAGCCCC TTATTCTGGCAGCAT  71 31
 IUJ48_27585 6011930 .. 6011959 + -12.8  -3.57144   ACGCCCGTTTCCCCG       CGAC-CCGCGCGC ATCGA GCGCGCGGCGCCG       TTTCGCCGTAACCCC  81 59
      gluQRS 6013325 .. 6013337 +  -4.8  -4.11216   GATCACCGGCTTGCC                GCTG GCCAG CAGC                TTTTCGCGCTGCCAG  66 473
 IUJ48_27600 6018283 .. 6018300 + -14.1  -4.36127   GTGGCACGACGAGAA             CGCCCGG GCAA CCGGGCG              TTTTCCATTGTTGGA 100 62
 IUJ48_27605 NONE
 IUJ48_27610 NONE
 IUJ48_27615 NONE
 IUJ48_27620 6021897 .. 6021915 + -13.1  -3.27298   TGCGGCAAAAACGAA             GGGGCCC GCAAA GGGCCCC             TTCATCATTCCGGCG  74 55
 IUJ48_27630 6024586 .. 6024596 +  -2.4  -3.03124   TGATGGTGACCGCCA                 CCGG CAT CAGG                 TATTCCAGCGTGCCC  41 254
 IUJ48_27640 6026061 .. 6026082 +  -5.7  -3.53012   CACCCAAACGCCAAA           GAAGGCCAC CCGC GTGGCCGCC            TTTGGCGACCCCGCA  55 141
 IUJ48_27645 6027434 .. 6027487 +   -11  -3.03159   TGGAAATGGCCGCCA C-GGTCTGAACGAAAAAGGCGCCCGC AATA GCGGGCGCCTCGATCGT-CAAACCAG TCTTCGGACGCTTAG  65 18
 IUJ48_27655 6029928 .. 6029958 +  -5.9  -3.29144   GATCCATTGCGCCAG       CGCGGCGCCGGAC AGGCC GGGCGGCGGCGTG       TTGTCCAGCGGGTAG  52 417
 IUJ48_27690 NONE
 IUJ48_27695 6037012 .. 6037039 +  -4.7  -2.80307   CGGGCTGGCCATGAC        GGGCACGC-GCG CCTGA CGCCGCGCCCCC        TCTACTGAGCATTTC  45 10
 IUJ48_27700 NONE
 IUJ48_27705 NONE
 IUJ48_27710 6040604 .. 6040618 +  -2.1  -3.39327   AGCCAGATCTGCACC              GACAGC AGGC GC-GTC               TTGTCGGTGTCGGCC  45 239
 IUJ48_27760 6050181 .. 6050205 +  -6.9  -3.57144   CCGTCGGCATCGAAG          CGCGCGCCGGC GCC GCCGCCCAGCG          TTTCCAGGTACACGA  57 517
 IUJ48_27780 6055559 .. 6055616 + -15.4  -3.33815   CGGCGGCGCGAAGCC GCGCC-CGTGCCGCGCGCGACGGCCGCG TCAA CGCGGGCCAT-CGCGCGGCTTGCGGCGC TTACTTCAACGGCAT  88 41
 IUJ48_27830 NONE
 IUJ48_27845 6069294 .. 6069317 +  -6.6  -2.73875   GATCGTAGCCGGGCG          CCTTGCGGCT GGCC AGCCGCACGA           TGATATTGGACACCG  46 505
 IUJ48_27880 6075306 .. 6075323 + -14.1  -5.47218   GCCCGGAAACGACAA             GGCCCCG GAAT CGGGGCC              TTTTTTTGCCTGCGG 100 57
 IUJ48_27915 6082812 .. 6082823 +  -7.2  -3.23853   CAATTCGGCGACCAC                GCGC CCCT GCGC                 TCTTGATTCCCCCGC  53 338
 IUJ48_27925 6084791 .. 6084821 + -21.2  -3.27298   TCGCACGGCCCGATG       CGGAAACGCCCGGC AAT GCCGGGCGTTTCCA       TTCATGCTTGCGAGC 100 50
        rpmH NONE
 IUJ48_27950 6090981 .. 6090997 +  -9.3  -3.05384   CCCCGGCAGGCAGGC              CGCGCGC AGC GCGGGCG              TTCCGTGGGGGCCGC  60 52
        yidD 6091286 .. 6091302 +  -7.2   -3.1585   TTGACGCTAAACTGG              CGGGCT TTGCT GGCCCG              TATTCACTTCAGTAG  51 37
        yidC 6093031 .. 6093048 + -14.1  -5.86061   TCGCGCCATGAAAAG             CCGGCCC CCAG GGGCCGG              TTTTTTTTCGTCCAG 100 48
 IUJ48_27965 6094767 .. 6094788 + -18.7  -4.67982   CCGCGCAACACGCAT           CGGGCGGCC CGCG GGCCGCCCG            TTTTCTTGCCTGCCG 100 68
        mnmE 6106125 .. 6106138 +  -2.3  -4.35926   GGGCAACCATTCAAC               GAGGA ATTT TCCCC                TTTTCACTTTCACGT  65 416
 IUJ48_28025 6107732 .. 6107752 +    -4   -4.3129   ATTAAATGAGCAATT            GCTCATTT ATAGA ATATGAGC            TTTTGCTCATACCTA  66 47
 IUJ48_28035 6110383 .. 6110398 +  -3.2  -3.53012   TTGACAACTAGTTTT              CCGG AAAAAACC CCGG               TTTCCAGGAAAAAAA  49 30
 IUJ48_28040 NONE
 IUJ48_28045 6113003 .. 6113060 +  -8.1  -3.28712   CGTGCGGGTTAACGC GCACCTTGCGCCGCCGGCTCCCAGCCGG AGG CCGGG-GCGGGCTTGCGCCGCGCGGTCC TTCTACCAACGGAAA  57 65
 IUJ48_28050 NONE
 IUJ48_28055 6115110 .. 6115127 + -12.7  -5.52384   ACCGGTCATTGCAAG             GGAGCGC CGCG GCGCTCC              TTTTTTTCATGGGCG 100 92
 IUJ48_28065 6117623 .. 6117643 +  -5.4  -4.07568   CAGTTGATTCAAGCA           GCGCGCGGA CTTG TCTGC-CGC            TTTTGCGGCAAGCGA  64 127
 IUJ48_28070 6118004 .. 6118036 + -18.6  -4.41348   GGCCAGGCCTGGCTA     CAACGCCCCAGAACC TCGC GGT-CTGGGGCGTTG      TTTCTTTGGGGCCGC 100 70
        mnmG NONE
        rsmG NONE
 IUJ48_28085 NONE
 IUJ48_28090 NONE
 IUJ48_28095 NONE
 IUJ48_28100 6126721 .. 6126753 +  -6.1  -2.79183   TGGGTGGCGCATCCG      CGCCGCGCGCCAATC CCA GGTTGCTGCGCAGCA      TGTCGTAGACCTGCC  47 96
 IUJ48_28110 NONE
        metC NONE
 IUJ48_28120 6131148 .. 6131190 +  -6.1  -3.14132   CGCCACACGCTTCAT CCGATCAGCACGCC-CCGGCG CTT CGCCGACGGGGCGCGGA-CGG TTCATGGCGAACCGA  49 69
 IUJ48_28125 6132314 .. 6132330 +  -3.5  -3.40163   TCAGGGCCGCGAAGG              CGGGCTG CTT CTGCGCG              TTGGTGTTGGTGATG  49 81
        hisN NONE
 IUJ48_28155 NONE
 IUJ48_28160 NONE
 IUJ48_28165 6141985 .. 6141995 +  -4.6   -3.5394   GTTTTGAATATTTTT                 CGTC CCA GGCG                 TTTGACAGCGGATTT  53 83
 IUJ48_28170 6142144 .. 6142164 + -11.9  -4.16943   AGACCCAAACCTGAA            TCCAGGCGA TGT TTGCCTGGA            TTTTAAAATGTAGGC  85 42
 IUJ48_28175 NONE
 IUJ48_28180 NONE
         tuf 6143708 .. 6143744 + -16.8  -3.83502   AGTAAGCAATACCCG   GATGGGTAGAGTGGGCT CTCA AGCCC-CTCTATCCATC    TTTGCTGTAAAAGTA  93 36
 IUJ48_28190 NONE
        secE NONE
        nusG 6144894 .. 6144912 +  -4.5  -3.53012   CGAACTGGATTTCAG             CCAGGTC GAAAA GACCTGA             TTTCAACCCCCGGGG  51 7
        rplK NONE
        rplA 6146138 .. 6146159 + -14.5  -2.62184   AACGTACTTTGGGCC           GCATCCGGA TTCC TCCGGATGC            TGCTGTCAAAGACCG  74 54
        rplJ 6146859 .. 6146879 +  -4.6  -3.14463   TGGCCTCGCCGCCGT           G-CGCGACC AGAA GGCCGCGGC            TTAATCCCCGCCCTT  47 1
        rplL 6147361 .. 6147393 + -18.4  -4.35524   GACCTGCGTCAACTT      GCCCGGGGACAGCG CAATT TGCCGTCCCCGGGC      TTTTGCGTTTCCAGG 100 41
        rpoB NONE
        rpoC 6155923 .. 6155946 + -16.8  -5.75342   GGCCAGAAGCAAAAA          GGCCGCTGAT TCGC ATCAGCGGCC           TTTTTTTTGCCCGCG 100 83
 IUJ48_28240 6158142 .. 6158181 +  -9.2  -2.93901   CGCCAGAATCCCGCC  GCCTGGTCGATG-GCGCAT TCG ATGCGCGTCCCGGCCGGGC  TGTACTTGATGGCGT  53 310
 IUJ48_28260 6163263 .. 6163302 +  -3.4  -4.59773   CGCCTATCTGGCCGT  CTTTTGCCGGCAACACGC CCAC GCGCCATGCGCGCAAAAG   TTTTTGACAGTGCGC  72 255
        rpsL 6164176 .. 6164187 +  -7.2  -2.78384   GGTCGTCTTATTGGA                CGGC CATG GCCG                 TGTAATGAAACACGG  48 145
        rpsG NONE
        fusA NONE
         tuf 6168118 .. 6168143 +  -7.5  -3.06509   AAGCAGCACACAACC         AGCGAGGGC CCATCAAA GCCCTCGCC          TCTCGTTCTTTAGGA  55 53
        rpsJ 6168521 .. 6168548 + -15.6  -5.26119   TGGACTCGTGAAGAA        TGGCCGCAATCC CTCG GGACTGCGGCCA         TTTTGTTTTTGCGCC 100 70
        rplC NONE
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ 6173609 .. 6173632 + -14.6  -5.94597   CGTTCTGAGGTAAAA          CGGCAAGGGT TCAG GCCCTTGCCG           TTTTTTTTCGTCTTG 100 64
 IUJ48_28345 6174260 .. 6174277 +  -4.1  -2.78384   CTGAGCGCGGCATGA             CGTCG TGGGCAAT CGACG              TGTCCTGGCCGGAAC  42 37
 IUJ48_28380 6181424 .. 6181441 +  -5.5  -3.53091   TCTGCGTTTGTGCCA             G-CGCCCG CTG CGGGTGGC             TTTCCAGGCCGGGGT  52 327
 IUJ48_28390 6183257 .. 6183276 +   -15  -2.52635   GCGAGGCAAGAAAAA            GGGCTCCC CTTG GGGAGCCC             GTTCATCATCGCCGT  73 47
 IUJ48_28400 6185804 .. 6185832 +  -8.9  -3.02511   GCTTTCCCAGATTGT       CGATTGGCCTGG AACTAG CCGGGCCAA-CG        TGTTGGGGGAATACC  56 153
        rplN NONE
        rplX NONE
        rplE NONE
        rpsN NONE
        rpsH NONE
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO 6190094 .. 6190110 +  -7.9  -3.14564   GCCGCCATCGAAGCC              GCGGGCG GCT CGCTTGC              TTGATCACGAGGTGA  55 5
        secY NONE
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK 6192631 .. 6192646 +  -4.6  -2.87344   ACAACGGCTGCCGTC              CGCCGA AGCG TCGTCG               TATCTAAAGGGAATC  45 3
        rpsD 6193362 .. 6193391 +   -10  -3.61654   GCAAGTCTCGCAGCA      GCCCGCTTTCCGCC ATTT GGCGG-G-GCGGGC       TTTGCGGTAAGTATC  71 99
        rpoA 6194530 .. 6194553 + -10.9  -3.53444   GGGGCGCTTCCCGCG          GCGCCCGGC CTTGCC GCCGGGCGG           TTTGCGAAACCGTCG  72 68
        rplQ 6195090 .. 6195117 + -21.4  -5.75342   TGTCTAGATAAGCGA        CAAGGGCGGGTC TTCG GACCCGCCCTTG         TTTTTTTTGCGCGGC 100 48
 IUJ48_28500 NONE
        dsbD 6198050 .. 6198062 +  -9.1  -2.72799   GTCGATGCAAGCCAG                GACCG CAC CGGTC                TGATCTATCTGCAAC  56 127
 IUJ48_28510 6199000 .. 6199022 +  -7.6  -3.72576   TGCATGGGCGCGTTT           CGTGTGCGCG TTT CGTGTGCGCG           TTTCATGCCGGGGCG  65 82
 IUJ48_28525 6201766 .. 6201792 +  -8.6  -5.18357   ACGCGCTGTCTACGA         GGGGGGTAGC CGATTGC GCGGCCCCCC         TTTTTTCATGAATTC 100 112
 IUJ48_28530 NONE
        ccsB 6205254 .. 6205269 + -11.8  -4.13767   CCATCCATGTGAAAA              GGCCCC GTTC GGGGCC               TTTTCACATGGCGCA  85 46
        cyaY 6207149 .. 6207167 + -17.4  -5.33026   AGTCTCCAACGAAAA             GGCCGGCG AAT CGCCGGCC             TTTTTCTTTCCGTTC 100 39
 IUJ48_28560 NONE
        aroB NONE
 IUJ48_28570 6212749 .. 6212763 +    -7  -2.57244   CGAAGGTGGCTTCGG               CGCGCG CGT CGCGCA               TCCATTCCTGCATCG  48 162
 IUJ48_28585 6217720 .. 6217750 + -13.3  -3.72695   TAGGGCTTCACCGGC       GTCGCCGGTCATC ATGGC GGTGACCGGCGAG       TTTCATGAAGCCGGT  84 180
         ssb 6218398 .. 6218424 + -19.5  -3.91144   GCAGTCAACAACAAA         GCCCGGCAAGC CTTGC GCTTGCCGGGC         TTTGTGCCGTCTGGG 100 54
 IUJ48_28595 6219785 .. 6219806 +  -3.8  -3.53012   TTTTTATTTGCCTTG           TTATCTAC CTATAA GTAGATAG            TTTAACCGAAACAAC  51 226
 IUJ48_28600 NONE
 IUJ48_28605 6220648 .. 6220659 +  -4.4  -2.74192   CCGATGACGTATCGA                CCTA TTAG TAGG                 TAATATTCAGCCATG  42 133
 IUJ48_28610 6221279 .. 6221315 + -15.2   -4.1822   CGTCCCCAGGTTCAC   CGCCACGGCCGCAAAGC GCAA GCTT-GCGGCCGTTGTG    TTTGTTACCGTGGAA  95 42
 IUJ48_28615 6224813 .. 6224826 +  -8.1  -3.28924   CGTAGGCGGCACGCA               CGTCC GCGT GGACG                TTGTGGCCCCAGGTG  55 495
        glcC 6229871 .. 6229881 +  -3.2  -3.61398   CCGAATACGCGGATG                 GGGT ATG ACTC                 TTCTTCCAGCCGGCC  51 337
 IUJ48_28665 6235201 .. 6235228 +   -12  -3.53444   ATCTCGTCCGTTTTT        CCGTT-CCGCGCC CTC GGCGTGGCGACGG        TTTGCGCCGGCCTGA  75 126
        dapA 6236361 .. 6236381 +  -3.1  -3.47322   ATTTGGTAATAAATG            TCTCCCCGC GAG GCTGGCGGA            TTGCTTATGATGCGG  49 85
 IUJ48_28675 NONE
 IUJ48_28680 6238125 .. 6238140 +  -3.2  -3.12606   CTGCCACTAGAGACC              CGCCAT GCCT ATCGCG               TTCAATCGTGTCTAC  43 57
 IUJ48_28685 NONE
 IUJ48_28690 6241030 .. 6241059 +  -9.1  -3.14132   GACCCTTGTCCGCCG       ATTCCGGGTCGCG TGCG CGCGGCCCGGGCC        TTCATACCGGAAGCG  60 102
 IUJ48_28695 6242472 .. 6242487 + -11.8  -3.32844   TTTCCCGTATTTTTC              CGGCCG TGCC CGGCCG               TTGTCCGGTCCAGCG  73 133
 IUJ48_28700 NONE
 IUJ48_28705 NONE
        aspS 6245687 .. 6245738 +  -7.1    -5.252   AGGGTTCATGGAATT GGAGTAATCTGGCAAACGCCGCC TGGGTT GGCGGTGCTTGCCGGGGCTCTTC TTTTTTGTGGGCCTC 100 276
 IUJ48_28715 NONE
        clsB NONE
        rfbB NONE
        rfbA NONE
        rfbC 6250855 .. 6250884 +  -4.8  -2.75963   CCGGCGCCGACACCG       CCGCGAGCACGG CCGGGC CCGTGCCCCCCG        ATTTGAAGTCCAGCT  43 450
 IUJ48_28755 NONE
        asnB NONE
 IUJ48_28765 NONE
 IUJ48_28770 NONE
 IUJ48_28775 NONE
 IUJ48_28780 NONE
 IUJ48_28785 NONE
 IUJ48_28790 NONE
 IUJ48_28795 6264972 .. 6264982 +  -8.2  -3.14132   TGGCATCGATCAGGG                 CGCC CGA GGCG                 TTCGTGGCAAGGCCA  57 239
        cysD NONE
        cysN 6269814 .. 6269825 +  -5.8  -3.55622   CGGCCTGCAATCGGC                GCAC ATCC GTGC                 TTTCGAACGCTTCCG  57 119
 IUJ48_28830 NONE
 IUJ48_28835 NONE
 IUJ48_28840 6276823 .. 6276837 +  -3.4  -3.14881   AACAACGAGAGGAAA               CGCGGG ATG TCCGCC               TTGCTCAAACCGTTG  43 48
 IUJ48_28845 6278076 .. 6278094 +  -3.1  -3.05844   GCTCGAACGGGCCAA             GGACG GTGAGCAGG CGTCC             TCTTGAAATGACGCC  43 1
 IUJ48_28850 6279404 .. 6279414 +  -2.4  -3.05596   ATCTGCCAGCTGAAC                 GGAC GCC GCCC                 TTCGATGACCGCGTC  41 176
        waaC NONE
 IUJ48_28920 6296385 .. 6296409 +  -9.2  -3.31415   GCGCGGCGCCGAATG         CGCC-GCCGGC ATCC GCCAGCAGGCG          TTCGATTTCCTGGTG  59 312
 IUJ48_28940 NONE
 IUJ48_28945 NONE
 IUJ48_28950 NONE
 IUJ48_28955 NONE
 IUJ48_28960 6302256 .. 6302276 + -16.1  -3.07994   AGCTTGACTGAATGG            CGCGCCGCG CAA TGCGGCGCG            TTGCATCAGGTTGCA  82 30
 IUJ48_28965 6303709 .. 6303734 + -19.1  -4.36127   GGTGTAAGCTAGCAA         CGGGCGTTTCG TGCG CGAAACGCCCG          TTTTGCATTCTTCCG 100 67
 IUJ48_28970 6304691 .. 6304720 + -11.3  -3.10164   GGCGGCCCTGGCGGC       CGCCCG-CGCCGCG CGC CCCGGCGGCGGGCC       TTGCCTGCTCGATGC  66 50
 IUJ48_28975 6305027 .. 6305041 +  -4.2  -2.62184   CCCTGCACGGCCACC               CGATGG TGT CGATCG               TCCTGTAAGGCCAGC  41 3
        lipB 6305700 .. 6305713 +  -2.3  -3.53012   GCAAGGACAACACCC               GCATG AAGA CAAGC                TTTACGCCGGCCGAA  47 20
 IUJ48_28985 6306785 .. 6306816 +  -6.6   -2.7419   CGAAGATCGTATTGG     TGGCCAGCA-GGCG CAGGAA CGCCATGC-GGCCG      TCGTTCAGCTGCTGT  46 380
        lipA 6308497 .. 6308512 + -10.4  -4.88407   CGCCAGAATGAAAAA              TGCCCC GCGA GGGGCA               TTTTTCATTCCGTGG 100 58
 IUJ48_29005 6309618 .. 6309645 + -22.8  -4.44797   CCTTCGCAGGAAAAA        GGCCCGCCGCAA TTGC TTGCGGCGGGCC         TTTTCGTATTCGTGC 100 114
 IUJ48_29035 NONE
 IUJ48_29040 NONE
 IUJ48_29045 NONE
 IUJ48_29050 NONE
 IUJ48_29055 6319488 .. 6319501 +  -9.5  -2.71712   GCCCACGGGTACGGA               GCGGC GCTT GCCGC                CTTTGCCCAGCACGA  56 423
 IUJ48_29085 6325024 .. 6325041 + -12.7  -6.06723   CGCCTTCGCAAAAAA             GCCCCTG CATG CAGGGGC              TTTTTTTTTACGGCC 100 47
 IUJ48_29100 6329262 .. 6329272 +  -2.4  -3.64236   TCATTCGAACTGACC                 GGGC CGC GCAC                 TTTCACGGTTTCCGT  50 309
 IUJ48_29110 6331049 .. 6331067 + -13.1  -5.00616   CGACACAGGTTTCAT             CGCGCCC CGCGC GGGCGCG             TTTTTTGCAAGGAAG 100 45
        leuC NONE
        leuD NONE
 IUJ48_29125 NONE
 IUJ48_29130 6334418 .. 6334432 + -12.8  -3.05343   CAACAACTAGGCCGG               CCGCGC CGG GCGCGG               TCTTGAGGGTGTCAC  72 31
 IUJ48_29135 6335542 .. 6335562 +  -6.1  -3.59979   GGCTGACCGCCGCCG            ATCCGACAT TGC ATGTCGGGC            TTTCCACTGCCCGGG  57 35
 IUJ48_29140 6337278 .. 6337299 +  -9.4  -3.59979   GCAAAATAGGGAAGT           G-CCGCGCC ATGTC GGCGCGGGC           TTTCCGGTCCGCGGG  68 49
 IUJ48_29145 6337767 .. 6337805 +  -2.9  -3.74693   GTGCCAGCGGGCCGG  CA-AAGCCGGCTCCGCGG CACC CCGAGGGGGCGGCACCTG   TTTCATGCGATGCGC  54 82
        metF 6338722 .. 6338742 + -16.9  -5.42862   AGGCGGCAACGGAAA            GGCCGGCAA TCA TTGCCGGCC            TTTTTTTCGACGTGT 100 58
 IUJ48_29185 NONE
 IUJ48_29190 6348852 .. 6348895 + -10.2  -3.14132   GCGCGTAGGTCCGCG CGTCGGTCGGATCCAGTTGC GCGA GCAACTCCATCAGTCCGGCG TTCATCAGGAAGCGC  60 187
 IUJ48_29210 6354805 .. 6354848 +    -5  -3.35867   GCTGATGTTCGAGTT CTAGACCGGGCGGGGTCCGTG CGC CCCGGCCGCCGTCCGA-CAAG TTGCTTCACGCTTAC  51 22
 IUJ48_29220 6363517 .. 6363529 +  -3.3  -2.75844   TCGTGTTCTTCGATC                AGCAC GGT GTGCC                CTTTGCCGTGCCGGC  40 195
 IUJ48_29225 NONE
 IUJ48_29230 NONE
 IUJ48_29235 NONE
 IUJ48_29240 6365991 .. 6366005 +  -7.8  -3.21258   TTTAAATATATATCT               TCCCGT TGA GCGGGA               TTGAGTTGCATTCGT  57 134
 IUJ48_29245 6367066 .. 6367079 +  -3.1  -3.90112   AGGTTAAGTTTGATA               TTTGC AGGG GCAGA                TTTCCTTGCGCCCGC  56 208
 IUJ48_29250 6367959 .. 6367983 +  -4.9  -3.70902   TTCGGCGATAGTGCT          TCGGCGGGT GGCGAAA GCCCGCTGG          TTTGGGTATCACCAA  58 266
 IUJ48_29255 NONE
 IUJ48_29260 6370420 .. 6370451 + -10.2    -3.767   AAATCCCAGATCGTC     CAGCCCCCCTCGGC GCTTAA GCCG-GGGGG-CTG      TTTCCTCACTCGGTG  74 6
 IUJ48_29265 6371037 .. 6371047 +  -8.2  -2.76291   ACTGGAGGCAGGTGC                 CGCG CAG CGCG                 TAGATTTTGGAGTTA  53 300
 IUJ48_29270 6371446 .. 6371458 +  -3.3  -2.56914   CTGCAGATTGCATGA                GGCGA TTG TGGCC                TCGATTAATGCAATG  39 140
 IUJ48_29275 NONE
 IUJ48_29280 6372566 .. 6372587 +  -2.2  -3.14344   CCACCGACGCAATCA           CTTCACGC ACCAGC GCGTGGAA            TTCCTCCCCGGCGTA  43 205
 IUJ48_29295 6375171 .. 6375181 +  -2.4  -2.52464   CCCCGGAGGCGATCC                 GGCC CGT GGCA                 TGCGTTGCGAGGACA  37 162
 IUJ48_29300 6376428 .. 6376446 +  -4.4  -2.73124   ACCAGCGGCCAGGCG             CCAGGGAG AAG CACCATGG             GTTTCACGAATCGCG  42 41
 IUJ48_29305 6377359 .. 6377402 +  -2.2  -3.61715   GCATGTCGATGGGCC TA-GCCCGGGGCCCGCGCCAG GCG CTTGCGGTGATGCCGGGCGTA TTCTTGCAGCGCGTC  50 93
 IUJ48_29340 6382997 .. 6383026 +  -3.4  -3.72576   CGGTCGGACCATGGC       GGCGCTCACGTC ATGATC GACCTGTCCGCC        TTTACTCCCGCAAGC  54 10
 IUJ48_29345 6383433 .. 6383455 +    -4   -3.0247   GGCACCTGATGGGAG           GCTGACATGG TGG CCTTGTTCGC           GTTTCTCTCGGGATT  44 21
 IUJ48_29350 NONE
 IUJ48_29355 6385153 .. 6385191 + -14.6  -4.60292   GGCATCGAAAGAGGC  GGTGCCGCGCCCGGG-CT TTGCC GGTCCCGGGCGCG-CGCC  TTTCTTCTTCTTATC 100 50
 IUJ48_29395 6394865 .. 6394884 +  -2.2  -3.03124   AAAAAGTGCTTGACG            ATAAATAG CGCG CTATTTAA             TATTGCGCAATGAAA  41 76
 IUJ48_29400 6395408 .. 6395432 +  -2.1  -3.95584   ATCCCCGATTAAAAA          TAGTGCGCTAT GAA ATTGTGTGCTA          TTTAATTAGTAAAGG  57 78
 IUJ48_29405 6395969 .. 6395997 + -17.5  -5.14563   CGCGCCAAAAGCAAA        GGCAGGATTGCAC CAA GCGCAATCCTGCC        TTTTTTCATCCACCC 100 58
 IUJ48_29440 NONE
 IUJ48_29445 6404903 .. 6404929 + -19.5  -5.28176   CCCAGAACAAAAAAA         GGCGGCAGGCT CGAAC AGCCTGCCGCC         TTTTTTGTCGCTGGC 100 56
        pyrE 6408506 .. 6408516 +  -8.2  -3.30124   AGGCACATGCCGCTT                 GCGC CAG GCGC                 TTGTCGAAGGTGGCC  60 140
 IUJ48_29490 6413859 .. 6413869 +  -2.4  -3.05046   ATACCGCCCGCCAGC                 CCGG AGC CCCG                 CTTTTCCACGGCTCC  42 40
        mreC NONE
        mreD NONE
        mrdA NONE
        rodA 6418720 .. 6418731 +  -7.2  -2.52516   AATCCGCGTTCAGCT                CCCG ATTG CGGG                 CTTCATACTCGCCCG  48 297
 IUJ48_29540 6424890 .. 6424918 + -23.3  -5.75342   GACGCTTCCCCTGCC        GAAACCGCCCGCA TCA TGCGGGCGGTTTC        TTTTTTTTGGGCCAG 100 45
        rsmI NONE
 IUJ48_29570 6429287 .. 6429312 + -12.5  -2.62184   CCATCGGGCGCACCG         GCGCGCTGCCCG GCG CGGGC-GCGGGC         TGCTGTGCCAGCGGC  62 286
 IUJ48_29585 NONE
 IUJ48_29590 6433447 .. 6433462 +  -8.2  -3.16668   GCAGCCGGCGCAGGT              GGCGGT CGTA GCCGCC               TTGCTCCAGGTATTC  56 367
        purT 6441999 .. 6442023 + -12.8  -5.58074   TTCCCGTTGTTTCCC          GCCACCGCCC CCACC GGCCGGTGGC          TTTTTTTCGTCGTTC 100 74
 IUJ48_29645 6442840 .. 6442860 +  -8.9  -3.28416   ATCATGGCGCCAGAG            TCGGCCTGG GAA CCATGCCGG            TTGCTGTGGCTACTC  59 99
 IUJ48_29650 NONE
        cydB NONE
        cydX NONE
        cydD NONE
        cydC 6449213 .. 6449226 +  -3.7  -3.52539   GCAATCCTGGCTTAA               GCGCG GTTG CGCGG                TTATAGTTCGCGTTG  51 26
 IUJ48_29675 6449881 .. 6449895 +  -3.5  -3.01712   GCGGCTGGATGAAGT               CCAGG AAAGC CTTGG               TCTTGGCGGGCAGCA  43 88
 IUJ48_29685 6451532 .. 6451544 +  -9.1  -4.37711   GCATGGAGGCATAAG                CCCCT GCA AGGGG                TTTTGCCTTTGATGC  83 58
 IUJ48_29690 6453170 .. 6453200 +  -9.7  -3.53012   GTCTTGAGCAAAGAA      G-GGCAGGGCCTCC GTTT GGAGGCCCTCTCGC       TTTCCGGACCGGGAA  65 140
 IUJ48_29700 NONE
 IUJ48_29705 6459534 .. 6459567 + -20.3  -4.56597   CGGCTGGTATGGCGC     GAGGAACGCCCGGCG GTAA CGCCGGGCGTTTCGC      TTTTTGGCGGACCGG 100 50
 IUJ48_29710 6461569 .. 6461627 + -26.3  -2.73721   TGTCCTTCGCCGGTG GCGCG-GTCACCAATGAAAAACGCGGCC CCGG GGCCGCGTTTTTCATTGGCAATGCGCGC TCATTCGAGCTTGAT 100 50
 IUJ48_29725 6464843 .. 6464853 +  -4.6  -2.62396   AGCCGGTGTCGATCT                 CGCT GGC GGCG                 TGATATACCCAAATA  43 12
 IUJ48_29730 6466022 .. 6466039 + -11.3  -5.75945   CCCGCCAATGAAAAA             CCGATGC CGCG GCATCGG              TTTTTTTTGGGCCGT 100 73
 IUJ48_29750 NONE
 IUJ48_29755 6470719 .. 6470745 + -12.9  -3.57144   TGGCCAGCAGTTCCC         GCGCTTCGGCC ATGCC GGCCGCGGCGC         TTTCCCCGTCGCGCA  74 156
 IUJ48_29780 6473805 .. 6473847 + -10.4  -2.78384   AGCATTAAGGCCGAC GCCGGCCGAGGGCGGGCCG TCCGCC CGGGACGCGC-CGGCTGGC TGTGATCAGCCGGCG  59 33
 IUJ48_29790 6474653 .. 6474670 +  -6.9  -3.14132   CTACTGGAGGCCTGA             GCCGCAG GGGG CTGGGGC              TTCCTGCCGGCGGCG  51 26
        rsmB NONE
 IUJ48_29810 NONE
 IUJ48_29815 NONE
 IUJ48_29820 NONE
        trkA NONE
 IUJ48_29830 6485014 .. 6485029 +  -5.4   -4.0162   CGCCATCCCTACGTT              GTGAGT GCTC GCTCAC               TTTGTCGTATAGGGC  62 211
 IUJ48_29835 6486478 .. 6486525 + -16.4  -3.35046   GGGTAGTTCTGGCTT TACCGGCCCCGGCAGGCG-CCCC TTCCC GGGGTTGCC-GCCGGGGC-GGTG TCTTTCAAGGCGTGC  90 43
 IUJ48_29845 6488354 .. 6488367 +  -3.7  -3.07029   GCTCCAACGCGGCTC               CGGCC GCCA GCCCG                TCTTCAACGTCTTTC  45 116
 IUJ48_29850 6488986 .. 6488999 +  -5.9   -4.2558   GTTTCTGGATGACCT               GGTCC CAGC GGGCC                TTTTCGTCGCGGATG  72 146
        gpmA NONE
 IUJ48_29885 NONE
 IUJ48_29890 NONE
        moeB 6497286 .. 6497312 +  -4.2  -3.57263   CTGCTATAACGCCAG         CCAGCCTGCCGC TCC GTGGCAGCCAGC         TTTGGACGTAACGGT  53 122
 IUJ48_29900 6498574 .. 6498594 +  -4.7  -2.72049   CCAAAAGTTATCAGA            TAACCTGAA AAG TACGGGTTA            TACTTCGCCCCTATG  44 81
 IUJ48_29905 NONE
 IUJ48_29910 6500833 .. 6500856 + -13.2   -4.8048   GCGGATAACAAAAAA          GGCCTGG-AGC AGC GCTTCCAGGCC          TTTTTCATCTCCCCC 100 123
 IUJ48_29920 6503805 .. 6503821 + -15.1   -5.1861   ACGGCCATGAAAAAA              GCCCGGC AGC GCCGGGC              TTTTTTCATCCTGCC 100 51
 IUJ48_29930 6505195 .. 6505210 + -11.8  -3.61398   TCGATTGCGCCAACG              GGCGGC GGAT GCCGCC               TTGTTCGGGAAGAGG  77 144
        ispB 6509778 .. 6509796 +    -3  -3.54459   GATCGCTAGTTGAAA             ACAGCACT GCA AGCGCTGC             TTTGAGCAAGGTTGG  49 32
 IUJ48_29960 6510059 .. 6510084 + -11.7  -5.22943   ACACCAGCAGCAATA         GCCGGAACCGC GAAA GCGGCGCCGGC          TTTTTTGCGTTTGCT 100 75
 IUJ48_29965 6511394 .. 6511404 +  -2.4  -4.18494   CTGGAGGAGAGCAGC                 CGCC CCT GACG                 TTTTACGTGGCCGTG  58 111
 IUJ48_29970 NONE
 IUJ48_29975 NONE
 IUJ48_29980 6514295 .. 6514320 + -10.4   -2.7419   AAGGCGATGTCAGGC         CGTGCCGGCCT GTGGA GGGCCGGC-CG         TGATTAGGATCCTGT  59 216
 IUJ48_29985 NONE
 IUJ48_29990 NONE
 IUJ48_29995 6517630 .. 6517640 +  -5.4  -2.62263   CTCATGTCGCCAAAG                 TCTG TCG CAGA                 TGGTCTCACCAGCAT  43 50
 IUJ48_30000 NONE
 IUJ48_30005 6518679 .. 6518692 +  -5.2  -2.90486   CCCCGAGCTACCGAG               GCGG CGCCGA CCGC                TCTCTAACCATTATT  45 5
 IUJ48_30010 6518993 .. 6519027 +  -5.5  -2.77283   GGCATGGCGGCAAGT     CCAATGGCCCGGGCC GCATA GGGGCGGGCCATGCG     TAACTTTATTGGTCA  46 5
 IUJ48_30015 NONE
 IUJ48_30020 6522175 .. 6522195 +  -3.8  -3.53811   GATGGACGTGACTCT            CGCGGTCG AGCGA CGCCAGCG            TTTGGACGGCCTGCA  51 224
 IUJ48_30025 6523317 .. 6523328 +  -2.2  -3.60587   GCGTTGGTGCATTCC                CGACG TGA CG-CG                TTATCTCGATTTTCT  50 261
 IUJ48_30030 6524584 .. 6524595 +  -7.2  -3.31461   CCGAAATCTCGAAGC                GCGC AGGT GCGC                 TTCTGAGACTAAATC  55 326
 IUJ48_30045 NONE
 IUJ48_30050 NONE
 IUJ48_30055 NONE
 IUJ48_30060 NONE
 IUJ48_30065 6531092 .. 6531105 +  -3.8  -4.87665   GATGCGGCAGCAGTT               CAGC GATCTG GCTG                TTTTTCTGCGTCGGC  81 501
 IUJ48_30125 NONE
 IUJ48_30130 6544386 .. 6544415 + -21.5  -3.61398   GTCGCTAGCTTTTGT       GGCCCACCGATGC GGCG GCGTCGGTGGGCC        TTCTTGAAAGCCGCC 100 66
 IUJ48_30145 NONE
 IUJ48_30150 6550155 .. 6550185 +   -11  -2.53263   GGTTCGCCGATGTTG       AATGGGTGCCGGCC GGA GGCCGGACCCCATC       TGAGTTCGACATGAA  62 42
 IUJ48_30155 6550584 .. 6550596 +  -9.1  -3.53811   GGTCCCTTCAAACTG                GCGTC ATG GACGC                TTTCAGGAGCATAGA  65 157
 IUJ48_30160 6551218 .. 6551233 + -11.8  -3.33696   TCTCGAAGAAGCGCC              GCGCGC ATGA GCGCGC               TTACTTCCAGGCCCC  73 72
 IUJ48_30165 6552499 .. 6552550 +  -2.9  -3.99678   GAGAGCTTGTATATG TCGGAGCGGGGTCAAACGTCGCTGC GGGT GTAGTG-CG-TGGAACTCGCACCGG TTTCGTTGTAAGAAT  58 197
 IUJ48_30175 NONE
 IUJ48_30180 NONE
 IUJ48_30185 NONE
 IUJ48_30190 6557165 .. 6557179 +  -8.5   -3.9392   TTGCGCGCCGCTGCG               CGCGC CTCCA GCGCG               TTCTTTAAACTGGCG  70 163
 IUJ48_30260 NONE
 IUJ48_30265 6570018 .. 6570052 +  -4.9  -5.40072   TTCGTCGACGACTTT    GCGGGGCGA-TGCTGG GGGG CTGGCACTCGCCCCAA     TTTTTTTGCGGCGGC  93 75
 IUJ48_30270 6570621 .. 6570653 +   -12  -2.67055   CCAAGAAAAATGCTG     GC-GCCTCGGCGGCT ACCT AGCCGCCGATGTAGC      TCATCTCGATCTTGT  65 6
 IUJ48_30295 6576154 .. 6576164 +  -2.4  -2.61582   GTCAGCGGGCGAAAA                 CCCG GCA CGAG                 ATTCTGCATGAAGTC  38 4
 IUJ48_30300 NONE
 IUJ48_30305 NONE
 IUJ48_30310 6579568 .. 6579584 +  -6.5  -5.75342   AGCCGTAGAGTCCAA              GCCGTAG AAA TTGCGGC              TTTTTTTTAAGCAAA 100 33
 IUJ48_30315 6581011 .. 6581027 +  -6.5  -4.07885   GCCGATGAAGACGGT              CCACGTC GAC GAGGTGG              TTTTAAGGAAGGATC  68 93
 IUJ48_30350 6586066 .. 6586084 +  -7.6   -3.6682   ACTGTCATAAACCGT             TAATGAAT TTG ATTCATTA             TTTCCATAAATCACG  63 23
        pstS 6587249 .. 6587267 +  -6.7  -3.65314   GCCGCCGGGCGAGAC            CGACAGCC AATT GGCTG-CG             TTCTTACAGGTTGAC  59 83
        pstC NONE
        pstA NONE
        pstB 6589991 .. 6590003 +  -4.8  -3.66803   AGCCATCACCCGCGA                CCCT AAATC AGGG                TTTACAGTCTTCCAC  55 39
 IUJ48_30375 NONE
 IUJ48_30380 6590933 .. 6590955 +  -4.9  -3.01966   TAATGCCGTGCTAAT          GCTCAT-GAC GCCT GTCGATGGGC           CATTTTTTTTGACGA  46 38
        arsD NONE
        arsA 6593137 .. 6593150 +  -2.3  -2.71364   ACCACCATGACGCCG               CGCCA AGCC TTGCG                TAGTTACCCACGTAA  38 9
 IUJ48_30395 6594525 .. 6594558 +  -5.3  -5.18726   GTGCTCATATCTCAG     ACAAAGACCGCTT CTGGCCGA AAGCGGTCTTCGG      TTTTTCTTGTCGCGA  89 52
 IUJ48_30400 NONE
 IUJ48_30405 6598108 .. 6598121 +  -2.3  -4.07246   CGTGAGTGGCAGGCG               GGTCA AGGT TGTCC                TTTAATTTCCCATGA  57 84
 IUJ48_30410 6598906 .. 6598930 +  -5.6  -4.63527   ACAGAACGCCAGACT         ACG-GGGCCCC TTCG GGGGCCTTCGC          TTTTTCCGGTCATAC  79 222
 IUJ48_30425 6602232 .. 6602247 + -11.8  -5.06414   CGCTCGCTGCAAACA              GCCCCC GAAA GGGGGC               TTTTTGTTGGCAGCG 100 57
 IUJ48_30430 6603338 .. 6603361 + -10.2  -2.78384   TCTTGCAAAAAAAAA          GGCCACCCCG GGTG TGGGGTAGCC           TGTCCTGAGAGAAAG  59 48
 IUJ48_30465 6611812 .. 6611848 + -10.8  -4.87133   TCTTTTCAGCCCATC   GGGGAACTTTCCTCCCC GAAT GGGGCGGCG-GTTCCCC    TTTTCTTTAGGAGAT 100 494
 IUJ48_30470 6612633 .. 6612669 + -21.7  -2.79831   CACTTGGCCCGAGTA    GGCTTGCCAGAGGCGAC TTC GTCGTCTGTGGCAAGCC    TATAGTCAAGCTTAC 100 328
 IUJ48_30540 NONE
 IUJ48_30545 6627349 .. 6627363 +  -4.2  -3.90112   ATCCTAAAAGGGCGA               TCGCGA TCA TCGCAA               TTTCATTGGACGCGA  58 192
 IUJ48_30585 NONE
 IUJ48_30590 NONE
        traD NONE
 IUJ48_30600 NONE
 IUJ48_30605 6641750 .. 6641787 +  -3.9  -4.63486   AGAGGGGAAGACCCA   AGGCGACGTGGGGCAGTG CTC CGC-GCGCCACGCGGCCA   TTTTATTGAGAGCCT  72 315
 IUJ48_30615 6642801 .. 6642826 + -12.5  -5.08824   CGCCTTTAGCTGAAA         GCCGGTACCGC GCAA GCGTTGCCGGC          TTTTTTGCGTGGGCA 100 77
 IUJ48_30620 NONE
 IUJ48_30625 6644766 .. 6644800 + -17.9  -3.53012   TCGGGCTGGCGCGTT    GCGCGCAAGGCCGGCA ACGA TGCCGGCCCTG-GCGC     TTTCCGCCGCGCGGG  93 51
 IUJ48_30650 NONE
 IUJ48_30655 6651727 .. 6651738 +  -3.6  -3.28712   GCGGCGGGGGCAAAG                TGGC GATA GCCG                 TTGTCGGCGCGCGAG  47 291
 IUJ48_30665 6653224 .. 6653235 +  -3.6  -3.85698   GGTTTGCGGGTCGAC                GCCG GCGG TGGC                 TTTGTCGGCCCGCAG  58 387
 IUJ48_30675 6654018 .. 6654044 +  -2.9  -4.57341   GACGAGGCAAGGCTC        G-CGCTACCGGG TAAT CCCGCTACCGGC         TTTTTCGGCAAAATT  69 83
 IUJ48_30680 NONE
 IUJ48_30685 NONE
 IUJ48_30690 NONE
 IUJ48_30695 NONE
 IUJ48_30700 6659157 .. 6659187 +  -5.2  -3.84451   GCCGCCATGTCGCGC       TTGCCGCGCCGGGC GGC GGCTTGCGCCGCGA       TTTCGGTTTCCAGCG  60 418
 IUJ48_30715 NONE
 IUJ48_30720 6663059 .. 6663078 + -12.2  -3.82061   AGTGTTGCCGGCAGG            GCCGATTC CCGG GAATCGGC             TTGTCTTGTCTCTGA  81 40
 IUJ48_30725 6665300 .. 6665311 +  -5.8  -2.82933   CCGGCGAAGCCGGAT                TCCG CGGG CGGA                 TATGCTAAGTTCCAG  47 47
 IUJ48_30730 NONE
 IUJ48_30735 6667255 .. 6667292 +   -22  -3.28712   TGACGCGGCGCGGCG   GCGCGCCCGCCGCGGCC TACCC GGCCGCGGC-GGCGCGG   TTCTGGCGGCGCGCG 100 38
 IUJ48_30750 NONE
 IUJ48_30755 6670234 .. 6670255 + -17.3  -4.94972   CGCCACAATGCAAAA           GCCCGGCTC CAAG GAGCCGGGC            TTTTTAATTCTGGTG 100 67
 IUJ48_30765 6671924 .. 6671952 + -19.5  -3.94333   TTCCGCCCCGCCTTG        CGGCGGGCGCTCG TTG CGGGCGCCCGCCA        TTTCCGTTTTCCCTT 100 50
        prfA 6673041 .. 6673057 +  -3.5  -2.87564   CAGGCCGAGCAGTTG              GCGGCGC TGG GCGACGA              TATCTGAGCGGCTGG  41 2
        prmC 6673930 .. 6673942 + -10.5  -2.91276   CCGGGGCGCGGCTGA                CGCCG GGC CGGCG                ATTTGTAACCGGCAG  60 26
        grxD 6674378 .. 6674395 +  -2.6  -3.05463   ACCCTGCTGGAGCAA             TCCGGC GCCACG GCCTGA              TTCCATGCGGCGACT  42 8
 IUJ48_30785 6674998 .. 6675027 + -17.9  -4.67641   GCCGTGATGGTCAAA       CGCCCCGGGGATC TACC GATTCCTGGGGCG        TTTTCGTTTTACCGT 100 60
 IUJ48_30795 NONE
 IUJ48_30800 6677656 .. 6677694 +  -9.5  -3.09635   ATCGCCACGCGTTTT  CCGGTGCTGCCCTGACGAC GAG GGCG-CGGGGCGGC-CTGG  TTGCGTCCTCCGCGT  60 11
 IUJ48_30825 6682812 .. 6682860 +  -2.9  -3.44051   CCTCGATGGCATCGA GGCCGGCTGCGCGTGTCAGGCC TGCGCC GGCGCGG-GCGCGCGGTAGGTC TTCTGGTAGTGCACC  49 61
 IUJ48_30845 6688205 .. 6688240 +   -11  -2.72344   GCCGCCGGCGAGATG    TGGCGGCCGGCGCG-GC TGA GCACGTGCAGGCTGCCC    TGGTTGAGAATGGGG  59 452
 IUJ48_30860 6690709 .. 6690726 + -14.1   -5.4833   TCCGGCAAGTGACAA             GCCGCCC GTGT GGGCGGC              TTTTTTCTTGCCTGG 100 54
 IUJ48_30920 6702226 .. 6702261 + -21.2  -3.76775   AAGGTCTTGCGGGGT    CGCCAAAGGCGGCCGC GCGG GCGGCCTTCTTTGGCG     TTTGGGTGTGTTGCG 100 323
 IUJ48_30935 6704815 .. 6704840 + -16.9  -5.28778   CCGCGCAGGTGAAAA         GCGCCGG-CCGT TGA ACGGACCGGCGC         TTTTTTCTGCGTGCT 100 55
 IUJ48_30970 6709969 .. 6709993 +  -5.5  -3.39449   GCTGTTGATGATGCG          CTCGGTCTGCG GCG CGCCGGCGGGG          TTGCTCTTGGTGAAC  52 229
        queC 6717400 .. 6717435 + -15.8   -4.2354   TTTTATTTCGATATA    TTGAATTCCATTCATT TAAA AGTGAATGGAATTCAA     TTATTTTCGACTTTG 100 190
 IUJ48_31000 NONE
 IUJ48_31015 6722128 .. 6722148 + -10.3  -2.58544   CGCCAGTTCCGCCGA            GGCCACGGC GGT GCCGCGGTC            GTTGTGCGGATGCAC  58 243
 IUJ48_31025 6724176 .. 6724232 +    -7  -3.57619   GCCTGATGGCCGCGG CGC-GGTCTCGGGGCGGCCTCGGAGGCG GTC CGCGGCCGCTG-CGCGCCGGAACCAGCG TATTATTTACCGTTT  59 35
        ilvD 6726168 .. 6726198 + -19.9  -5.14563   GCGGTCGATCCCATG       GAAAAAGCGGCGC CGCGT GCGCCGCTTTTTC       TTTTTTGGTCGCAGA 100 48
 IUJ48_31035 6727232 .. 6727245 +  -5.2  -3.57144   GCGCCAAACCCCTGA               GCGC TGCAAC GCGC                TTTAGCCGTGCAGCG  55 73
 IUJ48_31095 6740357 .. 6740367 +  -2.4  -3.33696   GCGTAAAGTCTGAAG                 CGGC CGC GCCC                 TTGATTCCGGCAAAA  45 35
 IUJ48_31100 6741313 .. 6741326 +  -4.5  -3.27525   GCGAGGCGCCGCGTT               CAGGC GAAG GTCTG                TTCCATTTCGCGGCG  47 86
 IUJ48_31135 6752274 .. 6752312 +  -7.3  -3.53224   TGTAAGGCAGGCCGT  GTCCGAG-GTGGCGGGCC CGCG GGTCCGCCACGCCCGCAA   TTTGCCGGCAAAATC  60 36
 IUJ48_31140 6753609 .. 6753631 +    -9  -3.60792   CGCCTCGCCCGGCAC           GCGCCTGCCC TGT GCGCAGACGC           TTTGCAGCTTACGCC  65 71
 IUJ48_31145 6754503 .. 6754515 + -10.5  -2.98015   GAGGGCAGCGCGATC                GCGCG TGC CGCGC                TATGTGGTAATTGGG  62 85
 IUJ48_31150 6755852 .. 6755877 +  -5.5  -3.14132   ACCGGCAGCAGCGTG         TC-TTCGCCG CTGAACA CGGCGAACGA         TTCGTCCACGCCGGC  47 402
 IUJ48_31180 NONE
 IUJ48_31185 6764154 .. 6764172 + -11.7  -3.19192   CAGCAGCAATACCGA             CGTGGCG ATTGC CGCCACG             TTGAATTGCATGGCG  64 79
 IUJ48_31195 6766616 .. 6766628 +  -4.7  -3.54475   GTGGCTCTAGGGCGG                GGGCG AGG CGCAC                TTCTATAGTCGGGGC  53 48
 IUJ48_31200 6767906 .. 6767946 + -15.2  -2.70932   GGCACGAGGGCGGCC  GCGGCCGCCACGGACGCC ATGCC GGCGGCGGGGGCGGCGGC  TGGTTCGGCGGCCCA  75 362
 IUJ48_31205 NONE
 IUJ48_31210 6769698 .. 6769716 +   -16  -2.62616   AGCGGGTTCACCCCG             TGGCGGCG GCA CGCCGCCA             TGATGTCGGCGCTCA  73 345
 IUJ48_31220 6771309 .. 6771344 + -21.8  -2.83403   CGACACGCAATAGCG    GGGCGTGCGCGCGGCG CCCG CGCCGCGCTCACGCGC     ATTTCCTCACCGACG 100 28
 IUJ48_31235 6779165 .. 6779183 +  -5.8  -2.79796   AAATTAATCAGTTGA             TCGGCGGC CGC GCCGCCCC             TGTAATAGCGTCAAC  47 34
 IUJ48_31240 6780620 .. 6780634 +  -3.4  -3.12999   TCCGTCACCTTGAGC               GTGTGC CAG GCGCCC               TTGGGTATCACGTAG  45 154
 IUJ48_31250 NONE
 IUJ48_31255 6781909 .. 6781938 +  -5.5  -3.66874   GGACCGTGGCGCGGC       CCTGGGGGCGACG CTGT CATCGTCCCGCGG        TTTCACTACGGTTGC  57 76
 IUJ48_31260 6783852 .. 6783871 +  -4.2  -3.79113   CGCACAGGTTGGCGG            CC-GCGGTG TAG TGCCGCAGG            TTCTTGTGCAGCCAT  55 374
 IUJ48_31270 6785156 .. 6785184 +  -6.6  -5.60993   CCCGAACCACGCAGA       CCCGCTGAACGCC CAAA GGCAC-CAGCGGG        TTTTTTTATGAGAGC 100 64
 IUJ48_31275 NONE
 IUJ48_31280 NONE
 IUJ48_31285 6786606 .. 6786641 +  -8.8  -2.87931   GGAAGGGGTCTTGAC    GACGTGTCCGGTCCGC GCAA GCGGGCCGGAGGCGGA     TCTATGAGAGGTAAA  55 27
 IUJ48_31290 NONE
 IUJ48_31295 NONE
 IUJ48_31300 NONE
 IUJ48_31305 NONE
 IUJ48_31310 NONE
 IUJ48_31315 6792388 .. 6792403 + -11.8  -4.05788   TCGCAACAGGAACAA              GGCGCC CGCG GGCGCC               TTTGCTTTGGGGGGC  84 51
 IUJ48_31325 NONE
 IUJ48_31330 NONE
 IUJ48_31335 6797173 .. 6797200 +  -2.6  -2.64155   GGCGGGCGTCCCCAT        GTCGGACGCGGTT CCC ATCCGC-TCTGCC        TGCATTTGGCGCCGA  38 50
 IUJ48_31340 6798375 .. 6798404 +  -3.4  -3.72576   CCCGCACGAACTGCC       CCAGGCTGACAC CGGCCA GTTCCAGCCGGG        TTTCCTCGGCCACCG  55 181
 IUJ48_31370 6803978 .. 6804001 + -14.6   -4.7173   TGACCCAAACAAAAA          GCCGCG-CTGC ATG GCAGTCGCGGC          TTTTTCAATCTGGTG 100 270
 IUJ48_31385 6807209 .. 6807237 + -10.1   -3.6106   CCCCTTTTTTCGTGT        TCGCCGGCAGGGC TGG GGCGGGCCGGCGA        TTTCCCGGTCTTGAA  71 74
        htpG 6809275 .. 6809294 + -16.4   -4.8622   ACGAAGGCAGGAAAA            GGGCGCCC GCGA GGGCGCCC             TTTTTCATTGGCGAG 100 49
 IUJ48_31395 6811306 .. 6811343 +  -4.7  -3.63515   GCGTGATGCGCCAGT   CGGCCGACAATTCCACCC CGC GCGAGGA-TTGGCGGCCA   TTGTTGACCGTCACG  54 445
 IUJ48_31400 6810853 .. 6810872 -  -9.2  -2.71011   ACGCGCCGCCAACCA            GCGCCAGC GCAA GCTGGCGG             TGCAAGGCTGCTGAA  56 43
 IUJ48_31380 6804183 .. 6804209 - -20.8  -3.07575   AAAATTGTCAGGCAA         GGGGCCGGCGCG GGG CGCGCCGGCCCG         CGTGCTTACTTCTTT 100 31
 IUJ48_31375 6803978 .. 6804001 - -14.6  -5.30616   TGACCCAAACAAAAA          GCCGCG-CTGC ATG GCAGTCGCGGC          TTTTTCAATCTGGTG 100 36
 IUJ48_31365 6802061 .. 6802079 - -13.8  -4.77567   AGGCGCACAAGAAAA             CGGGCGCA TCG CGCGCCCG             TTGGTCCTGCCGGAT 100 48
 IUJ48_31360 6801571 .. 6801598 -   -22   -5.4505   GCGGGCAATAAAAAA        GCCGCCGCCGGA CATG CCCGGCGGCGGC         CTCGCAACTTGACGT 100 48
 IUJ48_31355 6800345 .. 6800358 -  -3.1  -3.28712   CGCCGCCGCTCAGAA               GGCGAC GTC GT-GCC               CGCCCTTCAGTTGCA  45 6
 IUJ48_31350 NONE
 IUJ48_31345 6798115 .. 6798137 - -10.6  -3.35073   ATCACGCGCAAGGAA           TCCGCCAG CCAGGAT CTGGCGGA           GCGCCTGCTGGACGC  63 126
 IUJ48_31265 6783475 .. 6783490 -  -8.2  -3.55563   ACGGCAGCTGGCAAA              CGCCGC AGGT GCAGCG               CGCCGGTTCATAGGG  62 91
 IUJ48_31245 6780536 .. 6780557 -  -2.1  -2.73124   CGCGATCCCGCAAAG           GGCGGGCGT GGCT ACAACGGCC            GATGTTGCGTGCCCG  38 15
 IUJ48_31230 NONE
 IUJ48_31225 6771306 .. 6771334 - -17.3  -3.12327   CCTCGACACGCAATA        GCGGGGCGTGCGC GCG GCGCCCGCGCCGC        GCTCACGCGCATTTC  88 42
 IUJ48_31215 6769017 .. 6769046 -  -4.7  -3.73224   TGATCGGCGACGAAA       CCGCGCTGCCGGC CATC GCCCGCCGCCTGG        AGGAGCTGCCCGCCA  58 442
 IUJ48_31190 6763855 .. 6763883 -  -4.3  -3.61398   GCGGCGCTGGAACAA        GCGGCGCGGGAGC TCG GCTTCGGCGCGGT        CGATGCGCGCCGCCT  51 257
 IUJ48_31175 NONE
 IUJ48_31170 NONE
 IUJ48_31165 NONE
 IUJ48_31160 NONE
        dapA 6755229 .. 6755248 -  -9.2   -3.3344   AGTCAATCCCGACAA            GCTGCTCG AACG CGCGCAGC             GCGTGGCCGAAAAGG  59 304
 IUJ48_31130 NONE
 IUJ48_31125 NONE
 IUJ48_31120 6744472 .. 6744523 - -19.4  -3.58343   CGCAGCACGCTCAAA TGCACAGATGCCCATCGTGGCCGC CCGC GCGGCCGCGATGGGCAGCCCTGTA GATTCCCTTCCCCGC 100 306
        thpR NONE
 IUJ48_31110 6742717 .. 6742734 -  -8.3  -3.01712   CCCGGCCGCTGAACA             GGGCCGG CCAC CCGGCCG              TCAGGATGTCATCCA  56 45
 IUJ48_31105 6740805 .. 6740827 -  -8.4  -3.28924   CACGCCGGGCGACAA           CCAGGACCTG GAA CACATCCTGG           AGCTGATGCTGTCGA  59 510
 IUJ48_31090 NONE
 IUJ48_31085 6737150 .. 6737178 -  -2.1  -4.07687   ATGTCCGCTCCAAAA        TCCTTGCGCGCAG GCG CCGGGCGCCTGGC        GATCCATCACGCTCT  58 121
 IUJ48_31080 NONE
 IUJ48_31075 NONE
 IUJ48_31070 NONE
 IUJ48_31065 6733450 .. 6733472 -  -5.4  -2.98823   TTGCCTCTACAGATA           GGGCCGCGGT CAG ACCGCCAGCC           ATTCCTGGACCACGT  46 12
 IUJ48_31060 NONE
 IUJ48_31055 NONE
 IUJ48_31050 NONE
 IUJ48_31045 NONE
        lpdA 6726818 .. 6726852 - -13.5  -3.03124   GGCGAGTCCGGAATA    CCTCG-CGCGGCGCGG CGTG CCGCGCACCGTCGAGG     ACCTTGCCAGCCACG  69 420
 IUJ48_31020 6721853 .. 6721875 -  -6.3  -3.28712   GGTGCGCCGCGACAA          GCCGCTCAGCC GCG GGCTG--CGGC          ACCTGCAGGAGGCAT  52 8
 IUJ48_31010 NONE
 IUJ48_31005 6718822 .. 6718837 -  -2.5  -3.33261   CGGCAAGGGCTACAA              CAACC TCGAAT GGCTG               TCGACGCTACCGCTG  45 360
         ppc 6713461 .. 6713487 - -12.9   -3.9122   GATGGGGGCAAAGAA         GGCGCCGGAGC GCGAG GCCCCGGCGCG         GCGTTGGTCTTTCGC  86 42
 IUJ48_30985 NONE
 IUJ48_30980 NONE
 IUJ48_30975 6709744 .. 6709782 - -10.9  -3.29471   CGCCGACCAGATCAA  CCACGCGCTGCTGCGCCGC TAG GCGGCGCGG--GCGGGCGG  AGTCGGGCAGGCGGG  68 59
 IUJ48_30965 NONE
 IUJ48_30960 6707449 .. 6707474 - -12.5  -3.72576   GGTGTCTCCAGGAAA         TCG-GCCCCGGC GTT GCCGGGGCGCGG         GGATTGATCAGTTGG  80 33
        catC NONE
 IUJ48_30950 6706814 .. 6706839 - -13.9  -3.90112   CCTCGGGGAATGAAA         GCGCGGCCACC CGGA GGCGGCCGCGT          GGCGATTACAGGTGG  88 31
        pcaD NONE
 IUJ48_30940 6704815 .. 6704840 - -16.9  -4.13767   CCGCGCAGGTGAAAA         GCGCCGG-CCGT TGA ACGGACCGGCGC         TTTTTTCTGCGTGCT  95 151
 IUJ48_30930 6703617 .. 6703653 - -17.9  -4.63218   CGTCGCGCAAGAAAA    GCCGTCCGGCCGCCCGG CCG CCCGAAGGCCGGACAGC    CCCCTCGGGGGGCAG 100 75
 IUJ48_30925 6702233 .. 6702251 -  -7.3  -3.53012   TGCGGGGTCGCCAAA             GGCGGCC GCGCG GGCGGCC             TTCTTTGGCGTTTGG  60 208
 IUJ48_30915 NONE
 IUJ48_30910 NONE
 IUJ48_30905 NONE
 IUJ48_30900 NONE
 IUJ48_30895 NONE
 IUJ48_30890 NONE
 IUJ48_30885 NONE
 IUJ48_30880 NONE
 IUJ48_30875 NONE
 IUJ48_30870 6691536 .. 6691557 - -17.3  -6.09888   CTGTAAGAAAAAAAA           GCCCCTGGC AAAA GCCAGGGGC            GAGCGGCGGGCCCAA 100 123
 IUJ48_30865 6690709 .. 6690726 - -14.1  -3.41878   TCCGGCAAGTGACAA             GCCGCCC GTGT GGGCGGC              TTTTTTCTTGCCTGG  80 142
 IUJ48_30855 NONE
 IUJ48_30850 6687371 .. 6687402 -  -7.8  -3.05384   GCGCTGCCCAGCGAA      CCCGAGCGCGGC-GC GAT GCTGCGGCGCACGCG      CTTCGTGTGGGCGGC  52 477
 IUJ48_30840 6685226 .. 6685246 -  -8.9  -3.62046   TCATTCTGGTAATAA            GCGTATGCC TGC GGCGCACGC            CTGCGTGGCGGCGTT  65 40
 IUJ48_30835 NONE
 IUJ48_30830 6682470 .. 6682486 -  -7.9  -3.50393   GGTGATCGCACAGAA              CGAGCAG GCC CTGCGCG              CCTACGGCGGCATGA  58 366
 IUJ48_30820 NONE
 IUJ48_30815 NONE
 IUJ48_30810 NONE
 IUJ48_30805 6677420 .. 6677441 -  -7.9  -2.78384   TCCTGGCCGAGCACA           CGCACGCCG ATGA CGAGGTGCG            CTTCTTCGTCGCCGG  49 351
 IUJ48_30790 6674998 .. 6675027 - -13.5  -3.57144   GCCGTGATGGTCAAA       CGCCCCGGGGATC TACC GATTCCTGGGGCG        TTTTCGTTTTACCGT  81 73
 IUJ48_30760 6670234 .. 6670255 - -17.3   -4.3208   CGCCACAATGCAAAA           GCCCGGCTC CAAG GAGCCGGGC            TTTTTAATTCTGGTG 100 36
 IUJ48_30745 NONE
 IUJ48_30740 6666825 .. 6666855 -  -4.7  -3.30124   CGCGATTCCCTACAA      GGGCACGCCGCCTGC CTT GCAGG-A-CGTGGCC      GCGGGCGTGGTGCCG  49 441
 IUJ48_30710 6659540 .. 6659553 -  -9.5  -3.33696   GGGCCGCGTAAGCAA               GGCGG GTCA CCGCC                CTGGGAGTGGGGGCT  64 58
 IUJ48_30705 NONE
 IUJ48_30670 6652434 .. 6652444 -  -6.8  -3.05384   GGCGGCGTGATCGAA                 CTGG ACG CCAG                 CCAGATCGCGCCGCA  48 472
 IUJ48_30660 6651250 .. 6651263 -  -2.3  -3.72576   TGGCGGCGCAGCAAA               TGGCC GCGC GGTCA                GGGCTGGGCGCCGTG  53 239
 IUJ48_30645 NONE
 IUJ48_30640 6646507 .. 6646526 -  -2.9  -3.09671   ATCCCAAGGGGAACA            TGGTC-GA TCTCC TCAGACCA            GGAAGAAGAACAGGG  43 18
 IUJ48_30635 NONE
 IUJ48_30630 6644648 .. 6644664 -  -5.7  -4.65895   GCGCTGACGGAAAAA              CCGGCGC AAC GCGCCTA              TACCTCGATACTGGT  78 177
 IUJ48_30610 6641207 .. 6641229 -  -7.1  -2.63102   AGCAGTTGGATAGGA          TTCTATCGGC CGAT GCCGAT-GAA           GCACGGCGGACCATC  48 246
 IUJ48_30580 6634298 .. 6634308 -  -2.4  -2.51133   GACGCATCCATCAAT                 GCTG CTC CTGC                 GAACGCTGCGAGGAG  37 10
 IUJ48_30575 NONE
 IUJ48_30570 NONE
 IUJ48_30565 NONE
 IUJ48_30560 6629878 .. 6629888 -  -2.4  -3.78934   GCGCTTCGACAATAA                 GGAG CAG CGCC                 AGAAGCGCGCGGGCT  53 47
 IUJ48_30555 6628293 .. 6628325 -  -7.7  -3.88559   AATCACTGCGACAAA     GCCGGCTAGCGCGT TGGGGG ACGCGCT-GTCGAC      CTGCACGATGGCGAT  67 214
 IUJ48_30550 6626889 .. 6626909 -  -4.5  -3.29144   GTATGCGTTGCAGAA            GTCGCGGGG ATC CACCGCAGC            AACGTCGATTGAACA  49 304
 IUJ48_30535 NONE
 IUJ48_30530 NONE
 IUJ48_30525 NONE
 IUJ48_30520 NONE
 IUJ48_30515 NONE
       pilO2 NONE
        pilP NONE
        tadA NONE
 IUJ48_30495 6616155 .. 6616171 -  -2.2  -4.42386   CGCGCAGTTAGAAAA              CTCGAT CGCCC ATCGCG              GCGGTCTGAAGTCCG  65 1
 IUJ48_30490 NONE
        tadA 6614382 .. 6614396 -    -7  -3.72576   CTGTTTTTGATGAAA               TGCCGC TTG GCGGCT               TGTGAGCGTGGCCAT  62 166
        pilM 6612351 .. 6612366 -    -9   -3.5774   AGCCAACCCCGGAAA              CTCCAC ACAC GTGGAG               TTTTCTTCAATGTGC  65 468
 IUJ48_30460 6609744 .. 6609773 -  -8.6  -3.63569   GCAAGCTCCGAAGAA      GAGCCCACTCGCCC GTTC GGGC--GTGGGCCC       GGTAGGGGAAGGAGC  65 71
 IUJ48_30455 6608909 .. 6608927 -    -8  -5.93809   GCTCCAGAAAAAAAA             GCGGCCCC TTA GGGGCCAA             GATGAATGAGAGGGG 100 469
 IUJ48_30450 NONE
 IUJ48_30445 6606903 .. 6606919 -    -3  -4.65747   CAAGGGTTAAGAAAA             CACTCCA GGTC TGGAG-G              ACCTTGGCCTGGGCA  72 191
 IUJ48_30440 6606284 .. 6606309 -  -8.3  -4.63007   TAGAACGACAGAAAA         GCAAGGTCTCC GTTA GGAAACCTCAC          GCAGGCGTCTACAAA  88 115
 IUJ48_30435 6603338 .. 6603361 - -11.7  -6.06723   TCTTGCAAAAAAAAA          GGCCACCCC GGGTGT GGGGTAGCC           TGTCCTGAGAGAAAG 100 49
 IUJ48_30420 NONE
 IUJ48_30415 6598545 .. 6598562 -  -8.3  -4.10161   GAGCATTGGCCAAAA             GGGCGGG GCCT CGCGCCC              GCCGGGTCTTTTGCG  72 408
 IUJ48_30345 NONE
 IUJ48_30340 NONE
        arsC NONE
 IUJ48_30330 NONE
        arsH 6581558 .. 6581571 -  -6.7  -4.17316   ATTTCTTGAAAAGAA               CGGAA GCTA TTCCG                TATGTCCAGGTATAT  68 96
 IUJ48_30320 6581005 .. 6581017 -  -4.8  -3.14132   CCCGCTGCCGATGAA                GACG GTCCA CGTC                GACGAGGTGGTTTTA  47 38
 IUJ48_30290 NONE
 IUJ48_30285 NONE
 IUJ48_30280 NONE
        moaA 6570616 .. 6570656 -  -2.4  -5.06414   TGGCGCCAAGAAAAA TGCTGGCGCCTCGGCGGCT ACCT AGCCGCCGATGTAGCT-CA  TCTCGATCTTGTGTT  79 6
        merT NONE
        merP NONE
 IUJ48_30245 NONE
        merD NONE
        merE NONE
 IUJ48_30230 6563378 .. 6563405 -  -3.5  -2.52896   TGACCGTGCAAGGTA        TCCTCCTGA GGGAAATGTG TCAGGAAGA         AATCTATGACCCTTG  39 124
 IUJ48_30225 NONE
 IUJ48_30220 NONE
 IUJ48_30215 NONE
 IUJ48_30210 6558268 .. 6558311 -    -3  -2.78813   CCGGACTTGAAGAAG GGCAAGGCTAGCGCCACCCG AAGGAA CAGG-GGCGCG-GTCATGCC GGCGATTTTTGACAA  41 102
 IUJ48_30205 6557831 .. 6557857 -  -3.6  -3.90112   GGCCCCCGAAGCAAA         GCAACATGCCAT CAC AAGGGATGTGGC         GCGTAGTGCAAGCAT  56 42
 IUJ48_30200 6557369 .. 6557379 -  -6.8  -4.37092   AGCCGGCGGAGAAAA                 GCAG GTT CTGC                 ATTGCCCCAAAGGCG  75 63
 IUJ48_30195 6557030 .. 6557045 -  -2.5  -3.25664   ACAGACAGAATAAAG              GCAGC TCCCAT GCTAC               GGCGAGAGCCGTCGA  44 51
 IUJ48_30170 6552598 .. 6552629 -  -3.1  -3.55563   ATGTCATCTGCCAAA      GAACGCCGCAAC GGACTCGAA GTTG-AGCGTTC      CACCCCTGGTGCTTC  49 488
 IUJ48_30140 6545633 .. 6545649 -  -2.9  -3.54543   ATGTAGTTTTTCAAA              GAAGCAC CAT GTGTTCC              GCTTCATGGGGAGGC  49 50
 IUJ48_30135 6543997 .. 6544009 -  -4.1  -3.98312   TATAGAAAACCCAAA                TGTCA GTC CGACA                CTGATTTCCCAACTA  60 391
 IUJ48_30120 6540874 .. 6540884 -  -2.4   -4.3739   TACCTGGCGAGAAAA                 CCGC GTT GCGT                 TCCACATCGAGTCAG  65 148
       groEL NONE
 IUJ48_30110 NONE
 IUJ48_30105 NONE
         cfa 6536259 .. 6536292 -  -2.5  -4.29153   CGAGGAGAAAAAAGA     CATTGTTTGGCTAACC TGA AGTTAGC-AAGCGATG     CATCACACCGAGGGG  63 485
 IUJ48_30095 NONE
 IUJ48_30090 6533924 .. 6533934 -  -2.4  -3.32963   ACCGCTAGCGCACAA                 GCAG AAT CGGC                 GCCTCAACAGCTCGT  45 4
 IUJ48_30080 NONE
        tnpB NONE
 IUJ48_30070 6530807 .. 6530835 -  -2.9   -3.8579   ATGGAACAAGGGAAA        GCTCACCGGGCAG AAT CCGCCCCTAAAGC        TCCGAGAAATTTGGG  56 247
 IUJ48_30040 NONE
 IUJ48_30035 6524690 .. 6524700 -  -5.4  -4.68994   ACCAGGATCGAAAAA                 TGGA CCC TCCA                 GATCGGCGCCAGATC  77 215
        rplU NONE
        rpmA 6507663 .. 6507684 - -13.7  -5.63103   CCCGAAGGAAAAAAA           GCCCTGCCG CGTG CGACAGGGC            TTTGCCGTTCTGGCT 100 96
        obgE 6506415 .. 6506434 -  -2.1  -2.75708   CGGCGCGAAAAAAGG            CGTAATC GAACGA GATTGCG             ATTATGGCTTATTCG  38 34
 IUJ48_29935 6505224 .. 6505239 -    -6  -3.01712   CCTTGTTCGGGAAGA              GGGAGG GGCG CCGCCC               GCGCGCTGTCAGAGC  48 34
 IUJ48_29925 6503805 .. 6503821 - -15.1  -5.14965   ACGGCCATGAAAAAA              GCCCGGC AGC GCCGGGC              TTTTTTCATCCTGCC 100 63
        thiC 6500833 .. 6500856 - -13.2  -5.55769   GCGGATAACAAAAAA          GGCCTGG-AGC AGC GCTTCCAGGCC          TTTTTCATCTCCCCC 100 103
 IUJ48_29875 NONE
        grxC NONE
        secB NONE
 IUJ48_29860 6489998 .. 6490039 -  -4.1  -3.06315   GGAAGACTGGGAATA GGGCCCGGCGGC-TCGGGCG ATT CAGCCGCCGTCGCCGTGCTC GTCGCGGGCATTGCG  45 5
 IUJ48_29855 6488468 .. 6488487 -  -4.9  -3.01712   GCCTGTGCGCCAATA            CCGGTGC GCAGTT GCACCTG             GTGCGGCCGCTGGGA  46 489
 IUJ48_29840 6486334 .. 6486391 - -11.1  -2.54896   CGGCGAGTCAACCCA GGCGGCGGCGCCGGCCGAGCCGACCGC GGTGTT GCGG-CGGCGCATCCG-CGCCAACTCC GAGCCCATGCAACCC  59 164
 IUJ48_29800 6476065 .. 6476087 -    -4  -3.76224   GCGCCAGTGATCAAA           TACTGCGCAA TTC TAGCGCGGCA           GGGCGGGGGGCCGTT  56 114
        rimO 6474328 .. 6474340 -  -6.2  -2.57067   CCAATATCGAAGGGA                GGCC GCGAT GGCC                TGGTGGATCCTGTTG  45 393
 IUJ48_29785 6473798 .. 6473829 - -12.2  -3.27298   CTGGCCAAGCATTAA      GGCCGACG-CCGGCC GAG GGCGGGCCGTCCGCC      CGGGACGCGCCGGCT  71 49
 IUJ48_29775 NONE
 IUJ48_29770 NONE
 IUJ48_29765 6471171 .. 6471191 -  -5.4  -3.53012   GCCTCCGGGGCGAAA           GCCGCG-TC AAGC GAGCACGGC            GGGCAGATCGGCGAC  53 11
 IUJ48_29760 6470531 .. 6470551 -  -9.6  -3.36492   GCTGGAACTGCAGAA            GGCGGGCG GCAAG CGCCAGCC            GGTGGACGTGTTCGT  63 110
        dprA NONE
 IUJ48_29740 6466603 .. 6466628 - -13.9  -3.21395   AGCGTTGCGAGAAGA         CGTGCGCCGGG TGGC CCCGGCGCTCA          CGCGAAACGCGCGCA  78 63
 IUJ48_29735 6466022 .. 6466039 - -11.3   -4.8622   CCCGCCAATGAAAAA             CCGATGC CGCG GCATCGG              TTTTTTTTGGGCCGT 100 81
 IUJ48_29720 6462651 .. 6462670 -  -3.4  -3.04322   GGCAACGCGGCAATA            TGCGCCTG TTTC CAGGCCCG             GATTCAGCGGCTTAT  42 37
 IUJ48_29715 6461582 .. 6461613 - -21.8  -3.14132   TGGCGCGGTCACCAA      TGAAAAACGCGGCC CCGG GGCCGCGTTTTTCA       TTGGCAATGCGCGCT 100 40
        ilvA 6453170 .. 6453198 -   -11  -4.00042   GTCTTGAGCAAAGAA       GGGCAGGGCCTCC GTTT GGAGGCCCT-CTC        GCTTTCCGGACCGGG  81 43
 IUJ48_29680 6449592 .. 6449612 - -13.3  -3.53091   ATGCCGCCGTCGAAA            TGCACACGG ACT CCGTGCGCA            CGGGGCAGCGCGTCC  76 262
 IUJ48_29635 NONE
 IUJ48_29630 NONE
        lptC NONE
        lptA 6437720 .. 6437744 -  -3.4  -2.57132   CTGCGTGTGGATAAC         GTGGGAGGCGC TTCA GCGCC-CCTTC          TTCGATTCTTGCTGC  39 13
        lptB NONE
        raiA 6436001 .. 6436011 -  -2.4  -5.44119   CGCACTGCAAAAAAA                 CTCC GGT GGGG                 GCACTTTCCTGGCGG  89 363
 IUJ48_29605 NONE
 IUJ48_29600 NONE
 IUJ48_29595 6432710 .. 6432740 -  -6.6  -3.59979   GGCGTGTATCTCAAA       TCGTTGCCGTCGAC TCC GGCGCCGGCAGCGG       TCGCGAGCGCCGCGG  57 391
        rapZ NONE
 IUJ48_29575 6428922 .. 6428943 -  -2.9  -3.27298   CTGCTCAAGCACGAA           GGCAGC-CAG TAC CTGAGCCGCA           ATCCGCGCGCGCGGC  45 112
 IUJ48_29560 6426938 .. 6426952 -  -3.4  -2.56596   CGCCCGATCAAGGCA               GCTCGA ACG CCGCGC               GTAGCCACCGGACCT  39 3
 IUJ48_29555 NONE
 IUJ48_29550 NONE
 IUJ48_29545 6425024 .. 6425042 - -13.1  -4.54727   GCGGCCAAATGAAAA             CCGCCCG GCAGG CGGGCGG             TTCATGGCGGCGGCC 100 55
        argB NONE
 IUJ48_29530 6422102 .. 6422113 -  -7.2  -3.14132   CGCGTCGGCGATCAA                CCCC GCAA GGGG                 CGCCGGCGCAGCAGC  51 10
        slmA 6421373 .. 6421386 -  -6.7  -4.56597   GTCGGCCGGCAAAAA               TCGCA ACCC TGCGA                ATGTTGCATAAAAAC  79 106
 IUJ48_29520 NONE
 IUJ48_29515 6418571 .. 6418600 - -23.7  -3.17075   CGCCCGCCAACGCAA       CGGGCGGCTCAAG AACC CTTGAGCCGCCCG        CAAAACACAACCATC 100 50
        gatC 6412275 .. 6412288 -  -3.1  -3.32844   TGGCTTAGTCGAGAA               CCTTGG GGA CCA-GG               AAAAGGCCGTCCTGG  47 1
        gatA NONE
        gatB 6409184 .. 6409204 - -18.3  -5.27335   TTGGCCAAACAAAAA            GCCGCGGCA AGA TGCCGCGGC            CTTAGGTTCGGTCTG 100 80
 IUJ48_29470 NONE
 IUJ48_29465 6407983 .. 6407997 -    -7  -2.70932   CGCGCTGGCCAACCA               CCCGGC GAT GCAGGG               CCGCGGCGACGTGCC  49 334
         xth 6406737 .. 6406777 -   -14  -2.62184   CTTTGCGCCAGATCA TGC-GCCAGGCGGTGGAAC GGAC GTCCCACCGCCTGGTTGCT  ACAGCGTGGCGTCGT  70 24
        gdhA 6404903 .. 6404929 - -19.5  -5.88565   CCCAGAACAAAAAAA         GGCGGCAGGCT CGAAC AGCCTGCCGCC         TTTTTTGTCGCTGGC 100 74
 IUJ48_29435 6402590 .. 6402613 -  -2.2  -4.46212   GCGGCGATTATAAAA          GTGCCTGGCT GGCT AGCCCGTCCC           CGTATTTCCGCCGCC  67 92
 IUJ48_29430 6401475 .. 6401489 -  -2.7  -3.36515   TGGGACGGCCAAAGA               TCGGG GCAGG CCCGG               CGCGCGGAGCCGGTT  45 124
 IUJ48_29425 6400001 .. 6400015 -  -2.1  -3.28712   CCCCCTTGGGCAGAA              CG-CTG TTGT CAGGCG               ACTGCATGCCGGCGC  44 104
 IUJ48_29420 NONE
 IUJ48_29415 NONE
 IUJ48_29410 6396100 .. 6396115 - -11.8  -4.66833   GCGTAAGCCCAAAAA              GGCCGC CCGC GCGGCC               GCCTTTGGGCGGGCC 100 324
 IUJ48_29390 NONE
 IUJ48_29385 NONE
 IUJ48_29380 NONE
 IUJ48_29375 6388834 .. 6388849 -  -6.8  -3.85698   TGTTTGGGTCATAAA              CCCTCGG ACA CCG-GGG              TTGGCCCGGTCTGGA  64 206
 IUJ48_29370 NONE
 IUJ48_29365 NONE
 IUJ48_29360 6385148 .. 6385160 -  -4.7  -3.64703   GCCGCGGCATCGAAA                GAGGC GGT GCCGC                GCCCGGGCTTTGCCG  55 76
 IUJ48_29335 NONE
         pap NONE
 IUJ48_29325 NONE
 IUJ48_29320 NONE
        nhaA NONE
 IUJ48_29310 6377057 .. 6377111 -  -2.7  -3.78934   GGTGGTCGACAACAA GCCAATGCCGATCGCGTC-CTGCTCGT ACA ACG-GCAACGACGCGAGTTGCCCGGGC AGCATTGACGACGAC  53 272
 IUJ48_29290 6373132 .. 6373150 -  -4.5   -3.5013   GCGTAAAGGAAGCAA             GCGCG GGAAGCAAG CGCGC             CGTGACCGCGACCCA  51 54
        tenA 6372392 .. 6372415 - -18.2  -3.17901   ACACCTGTAAGGGAA          GGCGCCTGTC ACGC GACAGGCGCC           GCCTCGTCCCTCACA  93 36
 IUJ48_29205 6351854 .. 6351868 -  -2.7  -2.62192   GCCGACCGAATCAAC               CGTGC GCGTG GCGCG               TTCCCGTGATGCTGC  38 181
 IUJ48_29200 6349928 .. 6349954 - -18.1   -5.0133   CATTTTCCCAAAAAA         CAAACCCCGCG ACAGG CGCGGGGTTTG         TTGGGTGCCGAGGGC 100 41
 IUJ48_29195 6348645 .. 6348702 -  -8.9  -3.14132   TCCGGCGCGCATCAA GCAGAGCCTGCGCGAGGCGCGCTTGCAG CGG CTGCGCGC-CGCCTGACGCCGCCCCTTC CTACAGCTTGCCGAG  57 26
 IUJ48_29180 6344525 .. 6344551 - -18.1  -2.85668   CAGGGTCAGATCATA         GGGCTTGCACC GTTCT GGTGCAAGCCC         CGGGGCAAAACTGGT  89 44
 IUJ48_29175 NONE
 IUJ48_29170 NONE
 IUJ48_29165 6340891 .. 6340918 - -14.9  -4.31329   CGAAAAATGGGAAAA        GCCACACCGCA TTGTAT TGCGGCGTGGC         CGGACGGGGTTATTG 100 35
 IUJ48_29160 6340001 .. 6340024 -  -5.1  -2.88544   TTGTACGGTGAGACA          GGTCCTGCC TAGTTC GGCTGGTCC           TTCCCCGGGTCTTGC  45 10
 IUJ48_29155 6338722 .. 6338742 - -16.9  -3.75332   AGGCGGCAACGGAAA            GGCCGGCAA TCA TTGCCGGCC            TTTTTTTCGACGTGT  91 140
 IUJ48_29105 6328528 .. 6328563 -  -8.2  -3.04461   GACCGAGTCCGAACA    GCGCATC-GTCGGGCAC CTG ATGCGCGACGGCCGCGC    CAGCCTGGCCGAGCT  55 453
 IUJ48_29095 6326516 .. 6326544 - -16.8  -4.36595   CACGGAAATGGAAAA        GCTTTCCGGCCC TGGCG GAGCCGGAAAGC        GCTGTGGGGAGGCGT 100 69
 IUJ48_29090 6325024 .. 6325041 - -12.7  -5.00616   CGCCTTCGCAAAAAA             GCCCCTG CATG CAGGGGC              TTTTTTTTTACGGCC 100 51
 IUJ48_29080 6322682 .. 6322697 -  -4.6  -3.05384   GGCGGCGGGACGGAA              TGGGGC GACG GCCTCA               GCCGGAGGCGGCGGC  47 23
 IUJ48_29075 6321721 .. 6321736 -  -8.2  -4.07568   TTCTGGCCCTGAAAA              CCGCGC CGCC GCACGG               CGCATGTCCGAACGC  72 44
        dapF NONE
 IUJ48_29065 NONE
        xerC 6318965 .. 6318975 -  -2.4  -2.78384   GGCGCCGCCACGACA                 CTGG GAT CCCG                 CCTGTCGGGCGTGGC  39 154
 IUJ48_29030 6313751 .. 6313768 - -14.1  -3.53012   GGGGCGGGGGGCAAA             CCCCGGG CCAA CCCGGGG              GCGTAGCCGCCCAGA  81 182
 IUJ48_29025 6312430 .. 6312441 -  -7.2  -4.67353   TCACGTATCCAAAAA                GGGG ATCA CCCC                 GCCAGGCACTGCTCC  82 19
        dksA 6311787 .. 6311811 - -16.5  -5.26875   GCGGCAATGAAAAAA          GGCCATGCTGG AAA CCAGCATAGCC          TTTTGGTGTGGCGCT 100 57
        hslV NONE
        hslU 6309618 .. 6309645 - -22.8  -4.72272   CCTTCGCAGGAAAAA        GGCCCGCCGCAA TTGC TTGCGGCGGGCC         TTTTCGTATTCGTGC 100 66
 IUJ48_29000 6308497 .. 6308512 - -10.4  -4.93365   CGCCAGAATGAAAAA              TGCCCC GCGA GGGGCA               TTTTTCATTCCGTGG 100 30
 IUJ48_28990 6306103 .. 6306142 - -12.1  -3.35679   CGGCGTGACGCAGAA  CCGCGCGGCGGCGCTGGC GCTGT ACCAGCAG-GCCGCGCAG  GGCGGTCACGTCAAA  70 378
 IUJ48_28935 NONE
 IUJ48_28930 6296265 .. 6296276 -  -2.2  -3.18023   GGATCAGGATGAAGA                GCAC GCGC ATGC                 CGTGGCCTTTGGATC  44 39
 IUJ48_28925 6295768 .. 6295783 -  -2.5  -2.71712   CTCCCTTGGGGAAAT              GGCAT TCCATT ACGCC               GCGGCCGACGTGGCC  39 352
 IUJ48_28910 NONE
 IUJ48_28905 NONE
 IUJ48_28900 6290831 .. 6290845 -  -4.2  -3.31322   CGTAATGGTTGATAA               GCAGGA TAT TCATGC               CGACATCGTAGCGTG  49 106
 IUJ48_28895 NONE
 IUJ48_28890 NONE
 IUJ48_28885 6287757 .. 6287795 -  -7.4  -3.22448   ATCAATATGTATCAA   TGAGTCCGATTTCGTG ATTGGCA CACGTATTCGGACACA   TATTTACCGCCTGAA  57 29
 IUJ48_28880 NONE
 IUJ48_28875 NONE
 IUJ48_28870 6284367 .. 6284385 -  -6.6  -3.54543   ATTTATTGTGTCAAA             CCGAGGGC CAA GCCGTCAG             TGCTGGTCGACAGCG  57 22
 IUJ48_28865 NONE
 IUJ48_28860 NONE
        asnB 6279229 .. 6279242 -  -9.5  -3.17051   GTCGGACTATGAAGA               GGCGC TTGC GCGCC                GGCGATCCTAGGACG  60 117
 IUJ48_28825 NONE
 IUJ48_28820 NONE
 IUJ48_28815 6269697 .. 6269711 -  -2.7  -3.44146   TGGCTGGACAAGGAA               GCCAG CGAAT CAGGC               GTGCCGTAGCGAATC  47 39
 IUJ48_28800 6264566 .. 6264591 -  -5.5  -4.07885   GACCTTTTCCGAAAA         GGTGGATTACCT GAA AGGTA-TCTACC         CAGCGGAGTTGGTAC  63 239
 IUJ48_28750 6252766 .. 6252778 -  -6.9  -2.69964   CCGCCAAGGATATCA                CCGGC CCC ACCGG                GTTTTTACTTATAGA  48 30
 IUJ48_28745 NONE
 IUJ48_28740 6250164 .. 6250195 -    -5  -3.29511   CCTACGTTCGGACAA      TGGGTGGC-GCAGCG CCT CTCGGCCGCCAACCA      CCGGCAGATGTGGAT  49 257
 IUJ48_28660 6233186 .. 6233214 - -15.9  -4.50976   GCCGACAGCATAAAA        CAACGGCCGGGCA ATG CGCCCGGCCGCGG        AACCGTCAAGGGTGT 100 55
        ubiA NONE
 IUJ48_28650 6231525 .. 6231541 -  -2.1  -3.80858   CGATAACTTACCAAA              TGGCACC ATA GGTGGCG              ATATTTCCATTTGAT  53 220
 IUJ48_28645 6230897 .. 6230920 - -15.3  -5.08255   ATCGTCAAAAGAAAA          GCCCTCCGG GTGAGG CCGGAGGGC           TTTGCGGGTGGATTG 100 67
 IUJ48_28640 6229587 .. 6229609 -  -7.7  -2.75481   CGCCAACGGTAACGA          CG-GCCG-CGC GTT GCGACGGCTCG          CGGCCTACCGTCAGC  51 55
 IUJ48_28630 6226336 .. 6226357 - -15.9  -5.86061   GCCGACCAAAAAAAA           CCGGACAGC CGAG GCTGTCCGG            TGGGAGATATGCGTC 100 58
 IUJ48_28625 6225623 .. 6225640 -  -8.3  -4.41616   ATTTGTCGAAAGAAA             TGCCGGC TCAT GCCGGCG              ATCTGTGTGACGACT  80 39
 IUJ48_28620 6224355 .. 6224377 -  -4.6  -3.65902   CTGACCCGATCGAAA           GCCTGCCCGC GTC GCGGGCGTTC           CGGCCATTGCCAGAC  55 60
        uvrA 6213380 .. 6213416 -  -8.6  -2.64472   GATCCCCTAAAGTGA   TGCCGCGCCGCCTATCC GCCT GG-CGTGCGGCGCAGCA    GTTTGCCGAGATAGT  53 0
 IUJ48_28575 6212631 .. 6212649 -  -5.2  -4.13767   CTGTTGACGTTAAAA             GGAGCC GCGCACA GGCCCC             GGCCCGCGAGCCGGC  64 75
 IUJ48_28555 6207149 .. 6207167 - -17.4  -4.41047   AGTCTCCAACGAAAA             GGCCGGCG AAT CGCCGGCC             TTTTTCTTTCCGTTC 100 39
 IUJ48_28545 NONE
        lysA 6205254 .. 6205269 - -11.8  -4.14739   CCATCCATGTGAAAA              GGCCCC GTTC GGGGCC               TTTTCACATGGCGCA  85 50
 IUJ48_28520 NONE
        hemB 6198946 .. 6198972 -    -8  -3.53012   GGCGTCGCGTTGAAA        CCGTGGCGGGCC GCAAG GGCCCGCC--GG        TAGTTGGCGCGTTGC  60 139
 IUJ48_28495 6195090 .. 6195117 - -21.4  -2.63079   TGTCTAGATAAGCGA        CAAGGGCGGGTC TTCG GACCCGCCCTTG         TTTTTTTTGCGCGGC 100 79
 IUJ48_28395 6183257 .. 6183276 -   -15  -5.10461   GCGAGGCAAGAAAAA            GGGCTCCC CTTG GGGAGCCC             GTTCATCATCGCCGT 100 48
 IUJ48_28385 6181081 .. 6181130 - -11.9  -2.52464   CGCTTGTTCAAGCGA CGCTTCGGC-GTATCCGCGCGCGC GTT GCGCGCGCGGACGTAGCGGGGGCG TCAGTCGGCTGCCGC  64 26
 IUJ48_28375 NONE
 IUJ48_28370 6177905 .. 6177915 -  -2.4  -3.21099   GGTTTCCAGCATGAA                 GGGC AGG GCTC                 AGCGTTTGTTCTGGA  44 24
 IUJ48_28365 NONE
 IUJ48_28360 NONE
 IUJ48_28355 NONE
 IUJ48_28350 6174238 .. 6174256 - -13.8  -2.68942   AGGCCTTGAGACAAG             CGCCGCGC TGA GCGCGGCA             TGACGTCGTGGGCAA  71 66
 IUJ48_28340 6173153 .. 6173165 -  -4.8  -3.62518   GCAAAGAGCTCGAAA                GCCT GCTGA AGGC                GCAATTCGGTCTGCG  54 427
 IUJ48_28255 NONE
 IUJ48_28250 NONE
 IUJ48_28245 6157857 .. 6157874 -  -9.8  -3.02144   CCACGTCTTTGAATA             GCGCCC GGGGCG GGGCGC              CCTTGGCCTCAAGTC  59 34
 IUJ48_28235 6155923 .. 6155946 - -16.8  -4.93365   GGCCAGAAGCAAAAA          GGCCGCTGAT TCGC ATCAGCGGCC           TTTTTTTTGCCCGCG 100 56
 IUJ48_28145 NONE
 IUJ48_28140 NONE
 IUJ48_28135 NONE
 IUJ48_28130 6131821 .. 6131854 -  -2.2  -3.66921   AAGGCCAACGTGAAA     CTGGTGCACGTGCCG TATCG CGGCGC-CGCGCCCG     CCATCACCGACCTGA  50 438
        lrhA 6126268 .. 6126283 -    -9  -3.65902   CGCACGGCATGCAAA              GCGAGT TTTC ACTCGC               ATTGCTGGAGAAGGC  63 440
 IUJ48_28060 6115164 .. 6115178 - -12.8  -5.50723   GGATGAAAAGAAAAA               CGCCCC GGC GGGGCG               TTTCCAGTCGGCGTG 100 53
 IUJ48_28030 6107723 .. 6107761 -  -7.5  -3.83998   TGACTCCACATTAAA   TGAGCAATTGCTCATTT ATAGA ATATGAGCTTTTGCTCA   TACCTATCTTCAAGG  67 79
 IUJ48_28020 6105324 .. 6105350 -  -7.9  -3.14344   CAGCCCGGCGACGAA        CTGGACGCGCAG ATCA CCGCGCG-CCTG         CCGCCGCGCACGCCA  53 461
 IUJ48_28010 6102664 .. 6102680 -  -3.5  -2.87468   CGCTAGCACAGGATA              CCGCCCG CGA CGTGCGT              CACTTCTTCAGCGTA  41 25
 IUJ48_28005 NONE
 IUJ48_28000 NONE
 IUJ48_27995 NONE
 IUJ48_27990 6098677 .. 6098688 -  -4.4  -2.65166   AAACGAGAGAACGGA                TGTC GTAT GACA                 GCGTATCGGAAAATT  41 86
 IUJ48_27985 6097336 .. 6097356 - -11.1  -5.03994   CGTCATATAGAAAAA            CCGCCCG GGGCAAG CGGGCGG            TTTGTGGCGGCATGG 100 83
 IUJ48_27980 6096281 .. 6096291 -  -4.6  -2.57564   GCATCGGCCTAGAAC                 GGCA CGT CGCC                 CTCGATCGTGGTGCG  43 8
 IUJ48_27975 NONE
 IUJ48_27970 6094639 .. 6094657 -    -6  -3.72576   GCGTGCCCGAGGAAA             TCCAGC GCCGTCA GCTGGA             ACACTTCCGCAAGGC  61 386
        dnaA NONE
 IUJ48_27935 6087349 .. 6087362 -  -9.5   -3.9243   TAACGCTTTAAAGAA               CGGCC TGGC GGCCG                GACCGCCGGCGGGCC  73 81
        gyrB 6084797 .. 6084815 - -17.4  -3.57144   GGCCCGATGCGGAAA             CGCCCGGC AAT GCCGGGCG             TTTCCATTCATGCTT  93 85
 IUJ48_27920 6082504 .. 6082523 -  -7.8   -3.1355   TGCAGGGATAGGCAA            CGCGCC GCGGCATT GGCGCG             AGCAGGCCCGCAGGG  55 53
 IUJ48_27910 6080525 .. 6080571 - -22.3  -4.13767   GCCGTGATCGGAAAA TGACG-GCCGGGCCGGCCGTGGC AGC GCCACCGCCGGCCCGGCACG-CG GCTTACTTGGCCGGG 100 28
 IUJ48_27905 NONE
 IUJ48_27900 NONE
 IUJ48_27895 NONE
 IUJ48_27890 NONE
 IUJ48_27885 6075306 .. 6075323 - -14.1  -3.60151   GCCCGGAAACGACAA             GGCCCCG GAAT CGGGGCC              TTTTTTTGCCTGCGG  84 51
 IUJ48_27875 6073189 .. 6073207 - -13.1  -5.39681   ACAACGAAAGAAAAA             GGCGCCG GCGGG CGGCGCC             CTGGATCGCGCGGCC 100 80
 IUJ48_27870 NONE
 IUJ48_27865 6071699 .. 6071715 -  -3.6  -2.57564   GGACCTGTGGATAAC              CTGGGC GCCTA GCGCAG              CACCCGCACGCGCTT  39 17
 IUJ48_27860 NONE
 IUJ48_27855 6069849 .. 6069863 -  -9.2  -4.07568   GCCCGCCCCCGAAAA               CCGCCG ATT CAGCGG               CTTGCCAGCACCTTT  76 19
 IUJ48_27850 6068787 .. 6068797 -  -8.2  -3.42583   CGAATACACCGACAA                 GCGC TAC GCGC                 ATTTCGAACAGCTGT  60 139
 IUJ48_27840 6067388 .. 6067428 - -12.4  -2.78384   GCGCCGCCCAGTATA  CGCGCCGGGGCCGGCAAG CGCCC CTTGCCGGCCCCGTGTCC  CCCATTCGTCGCGAC  65 69
 IUJ48_27835 6066047 .. 6066076 - -13.5  -5.56263   AGCAGAAAACAAAAA       GCCGGCAAGCCGC AACA GCGACCCACCGGC        TTCCAGCCGATCAGA 100 48
 IUJ48_27825 NONE
 IUJ48_27820 NONE
 IUJ48_27815 NONE
 IUJ48_27810 NONE
 IUJ48_27805 NONE
 IUJ48_27800 NONE
 IUJ48_27795 NONE
 IUJ48_27790 6056757 .. 6056769 -  -2.6  -3.72576   CGCTGGGGGAGGAAA                GCGG GTTTT CCAC                AGGCCTTGGTTTTCT  53 82
 IUJ48_27785 6055294 .. 6055321 -  -5.4  -3.50393   CCTGATGGGACAGAA        CCGCAGCCGCCGC ATC GTGGCGAC-GCTG        TCGAGCTACATGGTG  52 321
 IUJ48_27775 6053483 .. 6053498 -    -6  -4.54026   CCTGAAAGAAAAGAA              GGGCGC GGCC GCGCTC               AGTCCAGCTTGATGC  76 24
 IUJ48_27770 NONE
 IUJ48_27765 6049297 .. 6049335 - -15.3  -2.50994   GTCAAGCTCACCAAG  CGGCTGGCCGAGAGCCTGG GCG CCGAGC-C-CGGCCAGCCG  TGGCTGCACATCAAC  69 366
 IUJ48_27755 NONE
 IUJ48_27750 NONE
 IUJ48_27745 NONE
 IUJ48_27740 NONE
 IUJ48_27735 NONE
 IUJ48_27730 NONE
 IUJ48_27725 NONE
 IUJ48_27720 NONE
 IUJ48_27715 6040176 .. 6040188 -  -3.3  -3.02144   CCACGCCGGCGAAGA                TCCTG GGC CTGGA                CGAGACCGGGCTGGA  43 242
 IUJ48_27685 6033086 .. 6033098 -  -6.9  -2.87344   CATGGCTCGGACAGA                CGCCG CCG CGGCA                CGTCGTCAGGCCGGA  49 31
        panE 6031993 .. 6032006 -  -4.5  -3.18582   GATCGGATCCAGGAA               CCCAC GGGC GTGGA                AGAGTTTTTTGCAAT  47 71
 IUJ48_27675 6031219 .. 6031252 - -18.9  -4.56597   CTTTCGCCTGAAAAA     TGACGCGGCCCCTTG TGTC CAAGGAGCCGCGTCG      GGCGATCCGGAGCGG 100 47
 IUJ48_27670 NONE
 IUJ48_27665 NONE
 IUJ48_27660 6029253 .. 6029263 -  -4.6  -2.78463   AGCCGCGCGATCACA                 GCCG CGC CGAC                 CAGGACATCCACCGC  43 342
 IUJ48_27650 6027450 .. 6027471 - -18.7   -4.8622   GGTCTGAACGAAAAA           GGCGCCCGC AATA GCGGGCGCC            TCGATCGTCAAACCA 100 53
 IUJ48_27635 6023937 .. 6023970 -  -7.3  -3.65812   CGTGCTGCAAGAGAA     CGCCCGCGCCAGCCTC AAC GACATCGGCGCG-GCG     GTCGGCCTGTCGTCC  60 444
        ilvB 6021893 .. 6021919 - -15.9  -4.56597   GCCGTGCGGCAAAAA         CGAAGGGGCCC GCAAA GGGCCCCTTCA         TCATTCCGGCGGTCC 100 79
 IUJ48_27595 6012728 .. 6012756 - -10.9  -2.70298   CTGTCCAAGCAGAAT        GGCGCCCCCGC CATCGAC ACGGGCGCGCC        GCTGGCGTCGCTGCA  59 168
 IUJ48_27570 6006786 .. 6006798 -  -2.6  -3.31792   CCATCAGCGCGAGAA                CCCG CGCGC CGAG                ATCTCCCAGATGTCC  45 1
 IUJ48_27565 6005194 .. 6005206 -  -4.7  -2.80816   TGGTGACGCACGAGA                TGCGC TTT GCGCG                CGAGGTGTGCGACCG  43 202
 IUJ48_27540 6001734 .. 6001765 - -20.2  -4.42386   GCCCCATCTACAAAA      CAGGGGTGGTGGCA GTGA TGCCACCGCCCCTG       TTCACGTTCAGGTGT 100 33
 IUJ48_27530 5999189 .. 5999209 -   -14   -5.2894   AAATACAAAAGAAAA            GGGCCGCT TATAG AGCGGCCC            TTGAAGATATTCCTA 100 52
 IUJ48_27515 5995766 .. 5995803 -  -7.6  -2.57132   CGGCTGGCCGAGAAC   CTGACCGTCGCC-GCGC TGGCC GCCCAGGCCGCGGTCAG   CGTACGCACCTTGAA  48 355
 IUJ48_27505 5994621 .. 5994654 -  -3.7  -2.82834   GACTTGATCAGCAGA     TACGCCATCGCTCACG CCT CCCGCGCG-CGGCGCA     GCGAACGCGCGATCA  43 3
 IUJ48_27500 5994058 .. 5994068 -  -8.2  -2.53995   ATTCATGGCAACGCA                 CGCG TAT CGCG                 TCTGGGGATCGACTG  53 157
 IUJ48_27495 5993170 .. 5993188 -    -6  -2.50307   GAAACGGCGATGAAT             TCCAGGTT GAT AACCCGAA             GGATAAAACGTGATC  45 460
 IUJ48_27485 5992510 .. 5992524 -  -2.1  -3.57144   GGCGCGATCCGCAAA              CGCAGG TGAT CCTG-G               ACAAGCGCGGGCGCT  50 248
 IUJ48_27450 5986625 .. 5986636 -  -7.2  -3.12351   GCGCGCCAGATCGAA                GCGG CGCG CCGC                 GATATCCTGCTCGCG  51 111
 IUJ48_27345 NONE
 IUJ48_27340 5958325 .. 5958346 - -17.3   -5.0925   TCCGAAAATGAAAAA           GCGCGCTCC CCAT GGAGCGCGC            TTTGCGTTGCCTGCG 100 72
 IUJ48_27325 5956301 .. 5956322 -  -7.9  -2.52464   CGCCCGGCGAAGCCA           CGCGCGC-CG GTT CGCGCCCGCG           GGACGCCGCCGCGCA  50 59
 IUJ48_27315 5954819 .. 5954837 -  -7.3  -2.53012   AACCGTAGCAGGAAC             GCGCGCG GATGT CGCGCCC             CCGGGGTCCGGTGTC  50 39
        metC 5953529 .. 5953574 - -10.2  -2.83255   ACAACAGCGACGACA TCGCCGCGCGCATCGGCGCG TGGATC CGCGCCAACGCCTGAGGCGT CAGCCCTTGACCGCC  60 25
 IUJ48_27280 5947417 .. 5947443 - -14.4  -4.67011   AAGGGTAGGGAAAAA         TCGCCGGGCAGA TTG TCCGTCCGGCGA         CATTGCCTACCAGCC 100 32
 IUJ48_27275 5947009 .. 5947029 - -18.3  -4.54727   CCCTGGAAAGCAAAA            GACCCCGCG TGG CGCGGGGTC            TTTTCGTTGGGCGGC 100 48
        rpoN 5933718 .. 5933758 -  -5.9  -2.53876   GTGTACGGTAACGGA  CGCTCGTCGAGGCACCGCG CGC CGCGATGCTTCGCCGCAAA  AAAGTCCCTTATTTC  45 39
 IUJ48_27215 5933409 .. 5933432 -  -9.4  -3.62096   GTCGAGCATGGGAAA          GCCGGGCCGC GTCC GGGGCCGGGC           GCGATTGACGTCCCC  68 65
 IUJ48_27210 NONE
 IUJ48_27205 5932599 .. 5932626 - -17.1  -3.87979   GAAACGGAAACACAA        CGGCTTGCAGG GCTGGG CCTGCAAGCCG         TGGCAGGTGGCGGCG 100 45
 IUJ48_27195 5930647 .. 5930700 - -13.7  -2.72144   CCACGTTGTGCAAAC CCAACCCTGGCGCGCTGCGCGAGGTG CCG CGCCACGCGCA-CGCCCCAGCCTCGG CCAGCTTGACGCGCG  71 53
         bfr 5929786 .. 5929805 -   -15  -5.48825   GATCACGCAAAAAAA            TGGCGCCC CGAG GGGCGCCA             TTTTCATGCCGGGCT 100 47
 IUJ48_27165 5923268 .. 5923299 -   -23  -4.72272   GCCGCGCATGAAAAA      CGGGCTGCCGCGCC CGAT GGCGCCGCAGCCCG       CATGGGGCGCCGGCA 100 71
 IUJ48_27160 5921729 .. 5921765 -  -8.6  -3.12351   CGGCCTGACAGGCAA   GGCGGGAAG-GCGGCGC TGGC GCGCCTTACTTCACGCC    GCGCGCCATCAGCCA  57 14
 IUJ48_27115 5909915 .. 5909943 - -12.3  -3.25823   GCCGCTGGACATGAA        CGCGCGCGGCCTG GCG CACATCGCGCGCG        CCTCGGTCAGCTACC  70 136
 IUJ48_27085 5904909 .. 5904928 - -12.8  -4.88407   GCACCCAATGAAAAA            GCCCGGCC GAAC AGCCGGGC             TTTTGTCTTCTGGCG 100 110
        mscL 5898936 .. 5898951 - -11.8   -5.5604   TGAACCAATAAAAAA              GCGCCC CACA GGGCGC               TCTTCCATTCACTTC 100 39
 IUJ48_27035 5896007 .. 5896026 - -12.1  -3.25823   GTGCCCGGACATGAA            GGGGCCC CGATGC GGGCCCC             TTTGTCATTCCATAA  71 516
 IUJ48_26900 5875306 .. 5875316 -  -2.4  -3.25823   GTTCTTCGACACCAA                 GGCC GAA GGCG                 CGCTCAAGGGTTCCG  45 252
 IUJ48_26885 NONE
 IUJ48_26880 5872514 .. 5872525 -  -2.2  -2.66274   GCCGGTAGAAGGAAT                GCAC GCCC ATGC                 CTCAGCCCTCGATCC  38 27
 IUJ48_26875 NONE
 IUJ48_26870 NONE
 IUJ48_26865 5869206 .. 5869223 - -10.5  -2.56046   TGAAACTCGAATGCA             CAGGCGC GAAC GCGCCCG              TCCGGCCCGTCGGAA  58 86
 IUJ48_26860 5867300 .. 5867315 -  -6.1  -3.21099   GTCGGTGACCACCAA              GCTGC TCAAGG GCAGC               AACGGCAAGGTCGAA  50 503
        fghA 5859200 .. 5859216 -  -2.2  -3.54475   CCGCCCAGTATAGAA              GCGG GGCGTCAGG CCGC              CGGTTTTCCAAGCCG  47 17
 IUJ48_26835 NONE
        rpoH 5857278 .. 5857296 - -17.4  -4.56914   CGACGCAAAGCAAAA             GGGCCGCG AAT CGCGGCCC             TTTGCATGGGTACGG 100 58
 IUJ48_26820 5853090 .. 5853137 - -14.1  -2.76322   TCATCGAAGACATCA TGCAGCGCCGCGCCGCCGGC GAGATCTGA GCCGGCGACGCGG-GCTGGG GGTCAGGCGCTGGCG  71 28
        coxB 5850851 .. 5850876 -  -8.2  -3.59979   CTCTGCGATGGGAAA         GCGG-GGCGCG ATCAA CGCGCGGCCGC         GACATCCTTCGGCAT  65 11
        ctaD 5849070 .. 5849085 -  -5.4  -2.78495   CGATGACGAATACCA              GCAGAA CCAG TCCTGC               GATCTTGTTGCGTCG  44 94
 IUJ48_26800 NONE
 IUJ48_26795 5847754 .. 5847801 - -29.3  -3.20723   CCGCCATCAAGCGAA GGGCGAGGCCGGC-GG-CGCCGG TTTC CCGGCGGCCCGCCAGCCTCGCCC CGTCCAGCCGATCGG 100 64
 IUJ48_26785 5846642 .. 5846658 -    -5  -3.53012   TTCTGTTGTCGGAAA              GGGCGG TCAGG CCGCCG              GGTCGTTGGCCGCGG  53 15
 IUJ48_26780 5845976 .. 5845991 -  -2.6  -3.54408   TTCCATGGAAACCAA              CTGAAT ACCG ATTCAA               CCGATGCGCGAGTTA  47 22
 IUJ48_26775 NONE
 IUJ48_26770 NONE
 IUJ48_26765 5843285 .. 5843303 -  -5.8  -3.30771   GGATATCGGCGACAA             GGCGCGCG ATG CGCTGGCC             CGCTGGCGGGCCGCG  52 128
 IUJ48_26755 5842288 .. 5842319 -    -5  -4.18401   CCATAGATCGCAAAA      CGCTGCCG-GCCGGC GTG GTCATCCCGGCAGCA      GCTGATTATTCTCCA  64 12
 IUJ48_26750 5841474 .. 5841494 - -12.5  -3.39842   GGATTGAAAAAATCA            GGGCTTGCC GTC GGCAGGCCC            GCTGTTCTTGGTGGC  73 2
        glmU NONE
 IUJ48_26740 5838598 .. 5838610 -  -6.9  -3.54475   GTCGCCATTATAGAA                GGGCC GCC AGCCC                GCCCGGAACGCGGCG  57 61
 IUJ48_26735 NONE
 IUJ48_26730 5835791 .. 5835806 -    -6  -3.61398   CGCCTGGTGGAAGAA              GGCGTG ATTG CGCGCC               AGGTGGCCATCCTGG  57 364
        glmS 5833520 .. 5833538 - -13.1  -5.38054   CGGCACAAAGAAAAA             GGCCGCC TTGAT GGCGGCC             CAGGTGTCGAGAGAC 100 132
 IUJ48_26705 5830758 .. 5830770 -  -9.1  -5.66868   AACGAACCAAAAAAA                GAGGG AAA CCCTC                TTTTCCGACGGCTAG 100 37
 IUJ48_26700 NONE
 IUJ48_26695 5829120 .. 5829148 -  -2.4  -3.06302   ACGATCCGCAGGGAA        TCGTCCACAG TCGCCAACC CCGTCGACGA        CTCGCCACCGGCCTC  42 58
 IUJ48_26690 5828348 .. 5828359 -  -7.2  -3.53343   AATCGTTCGCGCAAA                CGGC AATC GCCG                 CAGCCGCGCGGGGAT  57 41
 IUJ48_26685 NONE
        fepB NONE
 IUJ48_26675 NONE
 IUJ48_26670 5823017 .. 5823035 -  -6.6  -3.83026   GTCCGCGAGAGGAAA             TCATCGGG CGC CCCGACGC             AGCAGCAGCCAGATC  64 7
 IUJ48_26665 NONE
 IUJ48_26660 5820738 .. 5820754 -  -5.8   -4.3255   GCTGCAAGGAAGAAA              GCGACG GTGAA CATCGC              TGGTGGTCAGGCGGC  72 79
 IUJ48_26645 5818152 .. 5818189 -  -6.1  -4.64676   CCATGTGCAACAAAA   CCCCGCCGCGCGCTACC GGAC GTTAGCGGACGCCGGAA    AACCGCGCCGCGTCA  79 38
 IUJ48_26640 5817146 .. 5817164 -  -2.3  -3.02043   AACCGTTGCCCAAGA            GCCGG-CC GGTA GGTCCGTC             AGTCGTCCTGGGCGT  41 24
 IUJ48_26635 NONE
 IUJ48_26630 NONE
 IUJ48_26625 5814594 .. 5814628 - -14.9  -2.90075   CGCCCCGCAAGGATA     CGGGTCGACACCCCG GCCTG CGCGGTGCCGGCCCG     CGACACATCGGCGGC  72 422
 IUJ48_26605 5809544 .. 5809574 -  -3.8  -3.53012   CGCCGTCCGGTGAAA       TCGTGGCCCGCGCC AGC AGCGAGGAAGACGA       AGTCATTACCGCCCG  49 195
 IUJ48_26595 5807217 .. 5807251 -    -4  -3.75437   AAGCAGCGCATGAAA     CCGTGACAGCCCGCGC GCG GCGCGACACGTCCCGC     GTCAGTCCCTGAGCA  56 27
 IUJ48_26575 NONE
        speB 5801122 .. 5801157 - -12.4  -2.70932   GGCGCTCGGCAACCA    GGCCAGCCAGTGGCGCG CGG CGCGCC-CGGGCAGGCT    GCTGCTGGCGGGCAT  63 411
 IUJ48_26540 5792484 .. 5792512 -  -2.9  -3.75153   GGCCCCGAATGGAAA        GAGGGACGAACCG CGA CGCGTCGCCACCC        TATTCTACGTGCGCG  54 156
 IUJ48_26535 NONE
 IUJ48_26530 5790307 .. 5790324 -  -8.3  -3.13403   GGCCGGCCACCAATA             TGGCGGC CCAC GCCGCCC              GATTCGATCGCTGCA  57 138
 IUJ48_26525 NONE
 IUJ48_26520 5788947 .. 5788957 -  -2.4  -3.15861   GAGGATCTTCATCAA                 TCGG ATT CCGC                 AAACGTTCCCGTGGC  42 11
 IUJ48_26515 5787520 .. 5787545 - -11.1  -2.57344   GAGGTGCGCGACAAC         GCCAGCGGCAA CTGG CTGCCGCTGGA          CCTGAACCGCACCTA  59 242
        hutC NONE
 IUJ48_26490 5782748 .. 5782776 -  -9.4  -3.53224   CATTCCCGGCCGAAA        CCGGGCCGCAGC GTTCA GCCCCGGCGCGG        CTGCAGTTCGATCAG  65 11
        hutU NONE
 IUJ48_26480 NONE
        hutH 5777880 .. 5777898 -  -7.3  -2.75343   TCGACATGGTCAAAG             GCTGGGC AACAG GCCCGGC             GGCATCAGCGCGTTC  51 1
 IUJ48_26470 5776224 .. 5776274 -  -7.3  -4.14598   GCCAAGGAAATCAAA CAGCTGCTCGGCGC-GTCCGGCGC AACC GTGCAGGCCGGCGCGGCGCAGGTG GAAACCGCCGGCCGG  73 382
 IUJ48_26455 5772438 .. 5772450 -  -9.1  -2.86271   GGGCCACTAGAAGTA                CACCG TCG CGGTG                ACAGTGGACGAATAC  58 4
 IUJ48_26450 5771591 .. 5771636 -  -8.1  -3.28712   CGCCGCGCCGGACAA CGCGAGCACGAGGCGGCAGGCA CAG CGCCCGCCAGCACG-GATCGCA CGTACTGCCATGGGC  57 93
 IUJ48_26445 NONE
 IUJ48_26440 5768270 .. 5768291 -  -4.3  -2.71731   CGCATCTGGCAACGA           CCGGCCACA TTGT TCTGGCCTG            TCAAGCCGCGAGAAC  40 44
 IUJ48_26415 5761888 .. 5761898 -  -6.8  -4.28774   CCATCGAAGCCAAAA                 GGGA CCG TCCC                 CCTGATATCAATGAC  72 417
 IUJ48_26405 5760979 .. 5761026 - -19.9  -3.07816   CGGTCATCCAGTGAA GCGC-CGCGGCAGCCGGCCCGCGC CAT GCGCGGGT-GGC-GCCGCAAGCGC GGGCTCGGGCGTTCA 100 38
 IUJ48_26400 NONE
 IUJ48_26395 NONE
 IUJ48_26390 5759784 .. 5759840 -  -2.8  -3.31792   CCAGCACGTGCACAA CGCCGCCAAGGCCTACACCGAGACGCGC CAG GCGCAT-TCGTCGGCCGCCTGAGCG-CG GCCCCGGCCGCAACC  47 44
 IUJ48_26375 5756537 .. 5756547 -  -4.6  -2.72511   GTGATGCGCGTAAAC                 CCCA AGC CGGG                 CTCACCGCCAGATCA  44 27
 IUJ48_26370 NONE
 IUJ48_26365 NONE
 IUJ48_26360 5753044 .. 5753074 -  -6.1  -4.56775   ATCGGCCTTCAAAAA       GGCGCTCGTTTTC GCCAA GGAAATGAACGCC       GCCATCACCCTGCTG  78 392
 IUJ48_26325 NONE
 IUJ48_26320 NONE
 IUJ48_26315 5742358 .. 5742398 - -15.4  -3.18839   ACTTTCAAATACACA GAC-GCTCATCGTGGCCGC CCGC GCGGCCGCGATGGGCTGCC  CCGTAGATTCCATTC  86 284
 IUJ48_26310 NONE
        ssuE NONE
 IUJ48_26300 NONE
        ssuD NONE
        ssuC NONE
 IUJ48_26285 NONE
 IUJ48_26280 NONE
 IUJ48_26275 NONE
 IUJ48_26270 5733612 .. 5733622 -  -2.4  -3.13403   TGGGGTTGATGAACA                 TGGC GTG GCCT                 CCGCGCGCCGCGTCC  42 41
 IUJ48_26265 5732688 .. 5732730 - -16.2  -4.07568   CGCTTGCCGGGAAAA CCGCCCCCGCGGC-CGCGG ACTAAA CCGCGAGCCGCAGGTGCCG TATCTGTATGACCGG  95 2
 IUJ48_26260 5732356 .. 5732388 - -21.4  -3.17443   CGCAGACAATATATA      CCGAAACCGGCGCC GGACA AGCGCCGGTTTCGG      GCGACGGACGCCTAG 100 37
 IUJ48_26255 NONE
 IUJ48_26250 5729932 .. 5729952 - -11.1  -4.37886   CCAGGTCCGACAAAA            GGGGATCGG GCA CCGATCCCA            GCGCTCGCCATTTTG  90 152
 IUJ48_26245 NONE
 IUJ48_26240 NONE
 IUJ48_26235 5727082 .. 5727099 - -14.1  -5.21709   CCGGACATGAAAAAA             CCGGGCC TCAA GGCCCGG              TTCTTTTTGGCGACG 100 56
        fdnG NONE
        fdxH NONE
 IUJ48_26210 5719741 .. 5719775 - -22.9  -4.62441   CTCCAGATAAACAAA     CACGGCTGCCGCCCC GACAG GGGGAGGCAGCCGTG     CGGTGGGATCGGGCG 100 96
        fdhE NONE
 IUJ48_26200 NONE
        selB NONE
 IUJ48_26190 5715213 .. 5715226 -  -5.9  -2.53263   CGGATCGGTAAGCTA               CGCCG GATT CAGCG                GGCCGGGGAACAAGA  45 91
 IUJ48_26185 5713683 .. 5713702 -  -5.7  -3.96148   GGCCGCGAGCAGAAA            CTTGCCGC CTGGC GCGGC-AG            CGTGGTCATTGTCAG  66 389
        selD 5711081 .. 5711101 - -11.1  -2.56475   CAATGGCAGATCAAT            CACCAGGTG CAG CACCAGGTG            CCATTGCGGCCGGAT  62 108
 IUJ48_26155 NONE
 IUJ48_26150 5706729 .. 5706765 -    -8  -5.00616   CGTTGGCGGAAAAAA   CTC-TGCGGTGCCGGCGC GCG GCGCCGGCAAC-CATGAT   CGAAAGGTGGGCGCC  95 45
 IUJ48_26145 5706470 .. 5706522 - -18.4  -2.52635   ATTCGGACGAGGAAT GGGCCGC-CGTAGCGCCGGTCAC GCGCGGTT GAGACCGGCGCTTCGCGCGGCCT GCCGCGGGCGGGGCG  86 41
 IUJ48_26130 5702237 .. 5702254 -  -9.1  -3.64703   GCGTCGTCACCGAAA             GCGGCAT CCTC ACGCCGC              AGGACGTCCGGCGCA  63 155
        apaG 5696224 .. 5696238 -  -4.2  -4.24948   TGAGCAGATGGAAAA               CCGTAC AAC GTATGG               CCGCGCCCCGCGTCA  66 38
 IUJ48_26090 NONE
 IUJ48_26085 5693640 .. 5693683 -  -2.2  -3.74872   ACCGATCCGACGAAA GGGGCTGGCCGGGGGCTTG CCGGAAT CAGACCCCCCGGC-GCCCT GCGGGTTCCGTGCCG  53 84
 IUJ48_26080 5692711 .. 5692755 -  -9.9  -2.53263   GCGATTTTCAAGTTA GTC-TCCGGGTGGCGTGGCGC TCGCT GCGCCA-GCCGCCCGGCCGGC GCGACCCGCGCCGGT  55 40
 IUJ48_26075 5691693 .. 5691709 - -11.5   -4.4261   GCCTCAAGATGAAAA              CGCCCCC TTG GGGGGCA              GCAAGCCGAAGGCGC  90 66
 IUJ48_26060 5689129 .. 5689161 - -10.6  -3.14211   AGGGCTGGCCAGCAA     GGGCCGGGGGAAC-GC GAA GCTACTCCCCC-GCCC     GCTCCCAGCGCCGCT  63 12
 IUJ48_26050 5686990 .. 5687030 - -26.3  -4.35524   TGTGCAAACGGAAAA  CGAAAAGGCCCGAGCCGGA AAT TCCGGCTCGGGCCCTTTTG  CCCTACGCCTGACTG 100 184
        urtA 5685519 .. 5685531 -  -4.7  -3.02144   TGATGCCGTTGAATA                GCTGC ATT GCGGC                GATGTCGATGTTCAT  46 104
        urtB NONE
        urtC NONE
        urtD NONE
        urtE NONE
 IUJ48_26020 5681036 .. 5681053 -  -2.5  -2.83004   AACGAAAGGGAACTA             GCGGTGC TGCG GCGCCTC              GTTGGGAATGCCGTC  40 5
 IUJ48_26015 NONE
 IUJ48_26010 5678391 .. 5678405 -  -2.7  -2.79302   ATCAGTTTCAGCATA               GGCGC GCGCG GCGTC               AACACGTGGATTCCT  40 46
 IUJ48_26005 NONE
 IUJ48_26000 5676112 .. 5676151 - -11.3  -3.30124   GGCCACCGTGGACAA  CGGCGCGCCCGCGCC CATCGTTTCC AGCGCCGGCGCGCTG   GTCGAAGGCCTGCAT  66 425
 IUJ48_25990 5674760 .. 5674774 -  -9.2  -4.07568   TTCGCCTGCGCAAAA               GAGCGC GCC GCGCCC               GCCGTGTCAGCGGGC  76 32
 IUJ48_25985 NONE
 IUJ48_25980 NONE
 IUJ48_25975 NONE
 IUJ48_25970 NONE
 IUJ48_25960 5668185 .. 5668203 - -13.1   -4.7497   CGCAGCCATGAAAAA             CGCGCCC GGGGT GGGCGCG             TGTCGGAAACAGGGC 100 109
 IUJ48_25955 5666365 .. 5666384 -   -15  -5.18726   TCGGGACAAGAAAAA            GCGGCTCC CGCA GGAGCCGC             GCGGAGCTGCCCGGC 100 79
 IUJ48_25950 NONE
        atpB NONE
        atpE 5663997 .. 5664043 -  -5.7  -3.01712   GTCGTTCCTTTAACA CCTTGCGGCTCCGACGGCGCCCG GGA CGGGCAACG-CGGAGC-ACTCGA TACTTTGCCGGCCGG  48 105
 IUJ48_25935 5663515 .. 5663528 -  -2.3  -3.72576   CGGTCCCGGATTAAA               GCTGC GCGC GAAGC                TGGTTCAGCAGCTCG  53 7
 IUJ48_25930 NONE
 IUJ48_25925 5661346 .. 5661378 - -14.2  -2.60688   CAACCATCCGATAAG      GATGGGTGAGGCGC AGCTG ACGCCTAACCCATC      ACTTTCTTAAAAAGC  70 32
        atpG NONE
        atpD NONE
 IUJ48_25910 5658443 .. 5658457 - -12.8  -5.37593   GCGCAAATGAAAAAA               GCGGCC CAT GGCCGC               TTTTCCCGGATCCGG 100 69
 IUJ48_25905 5657454 .. 5657493 -  -8.5  -3.05384   CTTGCCGTGACGCAA  GCCGCCGCGCTTTCGTCA CGGGT TGGCGACA-CGCGGCGCC  GCGACCGCCGCACAA  57 66
 IUJ48_25900 5655991 .. 5656006 -  -5.4  -4.07687   ACGGTGTCGGGAAAA              TGGGCCG GGC CGGCC-A              GAGGGGATTGTCGCC  64 310
 IUJ48_25895 5653801 .. 5653827 -  -6.4  -3.36313   AACGACATAGAGTAA         TCGGACGGGCGC GGC GCGCGGGTCAGA         TTTCCAGCGGGTCGA  55 21
 IUJ48_25890 NONE
 IUJ48_25885 5650362 .. 5650378 -  -6.5  -3.71848   CGGCGCCACCAAGAA              CGGCG TGCTGGG CGCCG              AGGCCATCGTGCTGT  61 451
 IUJ48_25875 5648222 .. 5648252 -  -8.9  -2.76696   CTGCTGGTGAACAAC      GCCGGCATCGGCGC GGTG GCGCCGCTGCTG-C       AATCCGAGCCCGGCC  52 516
 IUJ48_25865 5646580 .. 5646626 -  -2.6  -3.53012   TCCGGCGGCGGCAAA CAGGTCGTGGCGATCGGCAAGC GCT GCCTGCTGGGCGCCAACTCCGG CATCGGCATTTCGCT  47 278
        ppk2 5644722 .. 5644750 - -18.2  -3.14132   CGCCGGTCCGATGAA       GCG-GCGGGCCGT GGCC ACGGCCCGCCCGC        ATCACGCGCCCGCGC  89 66
 IUJ48_25805 5633263 .. 5633283 - -18.3  -4.34402   CGCGGGACATGAAAA            CGGCTGCCC TCG GGGCAGCCG            TTTTTGTTTGTGCCA 100 59
 IUJ48_25785 5628875 .. 5628914 - -15.7  -3.28745   TCTTCAAGAAGTGAA  TCCGGCACGGCCGGACGC CTTGC GCGCCC-GCCGCGCCGCA  TGCGATGCCTGGGCC  86 100
 IUJ48_25770 NONE
 IUJ48_25765 5624962 .. 5624980 -    -3  -3.53012   GCGGGGCCCGCCAAA             GGCGGC TGCGCGG GCAGCC             TTTTTTGGCTTACAT  49 203
 IUJ48_25760 NONE
 IUJ48_25755 5621735 .. 5621756 - -15.9  -5.40072   CGGGCCCGAAAAAAA           GCCCCTCGA TGCA TCGAGGGGC            TTTTTTGTTTCCGGC 100 52
 IUJ48_25745 5620229 .. 5620239 -  -5.4  -3.55444   GCCGTATTGGCGAAA                 CGAT CGG ATCG                 GGACAAGGGCGCGGT  54 243
 IUJ48_25735 NONE
 IUJ48_25730 5617592 .. 5617627 -  -3.8  -3.05384   GGTCTGCTCATGGAA    GTCCCCGCGCGCGC-CG CTA CGTGCCCGAACCGGAAC    GGCTGAACCAGGTTT  45 6
 IUJ48_25725 5616795 .. 5616805 -  -2.4  -3.54424   GGCCAGCTGCGCAAA                 GTCG CTC CGCC                 CGCCATGCTCACCTT  50 313
 IUJ48_25705 5613173 .. 5613202 - -13.5  -3.12668   GAGCCCGACACCCAA       GCCACATCGGGGC TCGC GCCCCGGTGTGTC        ACAACGGTGTGCTAT  72 77
 IUJ48_25700 5611663 .. 5611695 - -27.7  -3.75153   CCGCGCCAATGCAAA      CGCCGCCGGCGCCGC ATC GCGGTGCCGGCGGCG      CATGGACCGCTGAGC 100 206
 IUJ48_25690 NONE
 IUJ48_25685 NONE
 IUJ48_25680 NONE
 IUJ48_25675 NONE
 IUJ48_25670 NONE
 IUJ48_25665 NONE
 IUJ48_25660 NONE
 IUJ48_25655 NONE
 IUJ48_25650 NONE
 IUJ48_25645 NONE
 IUJ48_25640 5600592 .. 5600611 -  -7.9  -3.53444   CCACTTCGTGCCAAA            TCAGCAC ATTTAA GTGCTGA             TTTGGTTGCAAGCGG  60 82
 IUJ48_25635 NONE
 IUJ48_25630 5598002 .. 5598029 - -10.6  -2.62184   GCGTTGGCGACACCA        CCG-CGGAGTACA CGC TGCACCCCGACGG        CACCGTCGGCGTCAA  55 467
 IUJ48_25610 5594684 .. 5594706 -  -9.8  -3.03124   GCGGACTGCTGAACA           CGGTCACGGC TTG ACCACGACCG           ACCTCAGGAATTCGC  59 6
 IUJ48_25600 5593386 .. 5593411 -  -4.5  -3.62597   CGGATCCGCGAACAA         CTGCGCGACGG ACTG CTGTAGCGCCG          GACGCCGGCCCGCCC  53 42
 IUJ48_25565 NONE
 IUJ48_25560 NONE
        metW 5584849 .. 5584886 -  -4.5  -3.53224   GACGGTCTCCTGAAA   CGGGCCGGCCGGGCGCA CGGA CGGGCGCGGCGGGCTTG    CGGCATTTTAGGCGC  51 75
 IUJ48_25550 5583104 .. 5583157 -  -4.5  -3.61398   GCTGGTGGTCAAGAA CCGTCCGCGCAAGCCGTACCGCGAC GTGCTG GTCGCCAC-CGACTT-CTCGGCCGG TTCGCGCCAGGCGCT  54 454
 IUJ48_25540 5581763 .. 5581783 -  -8.3   -3.1506   AAATTGTTGCAGGAA            TGAGGTCCA GCG CGAACCTCA            ATGCCAGTCGTCGCG  57 23
 IUJ48_25535 5580930 .. 5580962 - -17.8  -2.51464   CGATGACGCAGCAAG     GAC-GCG-CCGGCGCC TCG GGCGCCGGACGCTGTC     TCGCCGTTACGCGCG  83 32
 IUJ48_25510 NONE
 IUJ48_25505 5576090 .. 5576107 - -14.1   -4.1891   GGCGCTCAAGAGAAA             GGCCCGC TCGC GCGGGCC              TTTTCCATGCGCGTG  93 110
        ubiE 5565722 .. 5565755 -  -9.5  -3.49425   AAGAATAACGGACAA     GCCGCCGCCCCACAAG TTC CCC-CGGGGCAACGGC     AAGCCGAATCGGACC  65 49
 IUJ48_25450 5564530 .. 5564547 - -14.1  -4.67353   CGACGCATGGAAAAA             CCGGCCC TGAA GGGCCGG              TTGTGGCGGACGGCC 100 81
 IUJ48_25445 NONE
        ubiB NONE
 IUJ48_25435 5561112 .. 5561136 -   -15  -3.05816   TCATCGGTCATCGAA         CGCGC-CCGGC CGGG GCCGGCGCGCG          CCGCCGTGGCGCCCG  80 42
       rfaE2 5560335 .. 5560375 -  -4.1  -3.86015   GAGGCGGGCGAGAAA TC-CAGCCGCGCCGCGGTCG AGGC CAACCGC-ACG-GGCTACGA AGTGGGCGTGCGCAT  58 225
        metH 5549107 .. 5549135 - -18.8  -4.87892   TCCGAATAAAACAAA        GCGCCGCGCCGG ACGAG CCGGGGCGGCGC        TGGGGTGGCGCTGAG 100 79
 IUJ48_25390 NONE
 IUJ48_25385 5547307 .. 5547319 - -10.5  -3.53091   AGTGGGGTGGGGAAA                GGCCG GAG CGGCC                TACGGGGTCTGTTCG  69 25
 IUJ48_25380 NONE
 IUJ48_25375 NONE
 IUJ48_25370 NONE
 IUJ48_25365 5543800 .. 5543841 -  -2.7  -3.58037   CACGAAGTCGCCAAA GACCTTGCGCACGTGCTCG TACA CCAGCACCGGCGGCTGGTC  GGCGCCCTTGCGGGT  50 136
 IUJ48_25360 5543087 .. 5543109 -  -2.6  -3.54543   ATGGATTCCGTGAAA           CGGGAGGG TGTTCAG CCTTCCCA           GCCCAGGTGGCTGAG  47 14
 IUJ48_25355 NONE
 IUJ48_25350 5539912 .. 5539926 -  -5.6  -3.55563   ACGCCATCGGGCAAA               CTGCTG CCG CTGCAG               CCACTGTACGACAGC  54 408
 IUJ48_25340 5537670 .. 5537705 - -21.2  -3.74077   CGCCAGACACCCAAA    CGCCAAAGAAGGCCGC CCGC GCGGCCGCCTTTGGCG     ACCCCGCAAACCCTT 100 132
 IUJ48_25330 NONE
 IUJ48_25320 5530667 .. 5530713 - -12.9  -3.60792   GCCGCAAGCCGGAAA CCGCCGGCAGCTGACGCGCGCCG CCT CAGCCCGCGCC-GCC-CGGGCGG CCGAAGCTGGCGCGG  81 4
 IUJ48_25300 5526427 .. 5526477 -  -3.7  -3.56216   AATGAATCTACAGAA GTCGGACACCGGGCAGCGGGGGCC TTGC GGCCCGCGCCGTCCACT-CCTGCC GCCCGCTCGAAGGCG  53 86
 IUJ48_25295 5525224 .. 5525236 -  -4.8  -3.25823   TGCTGCTCATATCAA                CGCT CCACC AGCG                CAATGCGCTTGTTGT  49 9
 IUJ48_25290 5524075 .. 5524111 - -15.7  -2.60813   TACTCCCGTAAATAT    CGCGTTGCGGGTCCGCC GGT GGCGGACCCGCGGCAAG    GTTCTAGCGTGCGTG  77 29
 IUJ48_25285 5523254 .. 5523275 - -15.9  -4.86731   GGCGCCCAAAGAAAA           GCCGCCTTC CAGG GAAGGCGGC            TTCGGATGCGGGCGC 100 64
 IUJ48_25280 5521585 .. 5521595 -  -8.2  -3.61398   GCCTGCGCCGAAGAA                 GCGC GCC GCGC                 TGCCCTTTGAGGCCA  63 459
 IUJ48_25270 5520977 .. 5521006 -  -8.5  -4.57073   CACGTGCTGGAAAAA       GGCCGG-GTGGCCT GGC AGGGCACGCCCGCC       GAACTGGCCGCGCAA  83 106
 IUJ48_25205 NONE
 IUJ48_25200 5508080 .. 5508094 - -12.8  -2.52464   GGGTGCCGGAATCGA               CCGCGC TGG GCGCGG               CCGGGCTGGCCGGCC  62 245
 IUJ48_25185 NONE
 IUJ48_25180 NONE
 IUJ48_25175 NONE
 IUJ48_25170 5502605 .. 5502635 - -20.4  -2.78935   AGACCTGCCACCACA       GGGCCCGCCGGACA CTC CGTCCGCCGGGCCC       TGTGCTTTTCGGTTG 100 81
 IUJ48_25160 NONE
 IUJ48_25155 5499987 .. 5500013 -  -5.8  -3.35046   TCACGCTGGTAAACA        GGCCCATCGGA GGTCGG CCCG-CGGGCC         GAGATTATTCAGGGG  53 30
        zapD 5499115 .. 5499136 -  -4.3  -3.92869   GCACTGACGGAGAAA           GCCGTATTG TGAC CTAGACGGC            CGACATTTCCGTCAT  58 112
 IUJ48_25145 5497778 .. 5497809 -  -2.8  -2.50016   CCGCAGGATGAACAG      GCGCGACGGGCTCAC GGG GCG-GCCCCTCGATC      AGCGCGTGGCGGGCG  39 24
 IUJ48_25140 NONE
 IUJ48_25135 5491252 .. 5491276 -  -7.7  -3.61715   CACCGTGGGGAAGAA          CCCGGCGCGCG CGC CACGCACCAGC          CCCAACGCCTGCCGG  63 336
 IUJ48_25125 5488576 .. 5488611 - -10.4  -3.59979   CGTCCCGATGGCAAA    CCGCTGATCGGCGCCAC GCC GTGGCGC-AATCTGTGG    CTGAACGCCGGGCAT  67 222
 IUJ48_25055 NONE
 IUJ48_25050 NONE
 IUJ48_25045 NONE
 IUJ48_25040 5470253 .. 5470268 -  -2.6  -3.05384   TCTGGGCCGATTCAA              TGC-TGA GCA TCAGGCA              GTCTCCTGGCGCGCG  42 19
 IUJ48_25035 5469524 .. 5469540 -  -5.7  -4.48299   TTATATCGAAAGAAA              CACCGCG GCC CGCGCCG              CATTTGCGGCTTTCG  76 43
 IUJ48_25030 NONE
 IUJ48_25025 NONE
 IUJ48_25020 5466300 .. 5466314 -  -3.5  -2.52464   GCCTCGCGCAACGGA               TGCCC GGCGT AGGCA               GGATCCGCCAGCAAG  39 78
 IUJ48_25015 NONE
 IUJ48_25010 5462642 .. 5462657 - -11.8  -4.14392   GCGTAAGCCGCAAAA              GGCCGC CCGC GCGGCC               GGCTTGCGGCGGGCC  85 325
 IUJ48_25005 NONE
 IUJ48_25000 NONE
 IUJ48_24995 NONE
 IUJ48_24990 NONE
 IUJ48_24985 NONE
 IUJ48_24980 5454409 .. 5454428 -  -3.4  -5.04249   TTTTCAAAAAACAAA            CACCAGGG CGGC CCCCGCCG             AACTCACTCGGCGGC  81 29
 IUJ48_24975 5453645 .. 5453660 - -11.8   -4.1466   ACGTAAGCTTCAAAA              GGCCGC CCGC GCGGCC               GCCTTGAAGCGGGCC  85 340
 IUJ48_24965 NONE
 IUJ48_24960 NONE
 IUJ48_24955 NONE
 IUJ48_24950 NONE
 IUJ48_24945 NONE
 IUJ48_24940 5446047 .. 5446083 -  -3.6  -4.36411   GATGAACGAGGAAAA   GGCCAAGCTCGAACAGC TGCT GCTGTTCCTGCAC-GCC    AACCCCGGGCGCGCC  67 417
 IUJ48_24930 5443158 .. 5443180 -  -7.7  -3.40403   CGGCTTCTACGACAA          GCT-GGCGGC GCAG ACCGCCAAGC           TGGCCCAGGGACTGC  58 413
 IUJ48_24910 5440296 .. 5440328 -  -9.1  -3.49475   GGTAGTCTGATAGAA     CCG-GGGGCC-CGCC GCACT GGCGTGGCCCGTCGG     GAGCGCGGGGTGGAC  65 90
 IUJ48_24905 NONE
        ruvX NONE
 IUJ48_24895 NONE
 IUJ48_24890 5436981 .. 5436991 -  -2.4  -2.72661   CAGCAGCTTCAAGCA                 GGGG TCT CCCA                 GGCCGGGTTGCCACC  38 8
 IUJ48_24885 5435883 .. 5435922 -   -20  -3.33419   ACGTTCAAATGAACA  GACGCCAGTTGTGGCCGC CCGC GCGGCCGCAACTGGCAGC   CCCGCAGATTCCATT 100 340
 IUJ48_24875 NONE
 IUJ48_24870 5432342 .. 5432366 -  -8.4  -3.63515   GGGTACTGCCAACAA          TGGCGGCCCC TGCGC GGGGCCGTCG          GATTCAGGTCAGCCG  65 29
 IUJ48_24865 5431024 .. 5431051 -  -3.2  -4.37092   ATGGTGCGCAGAAAA        CCGAGGCCCAGC GCGC GCGCCGCCTCGA         CCTGGCCCGGCGGGA  66 448
 IUJ48_24855 5428985 .. 5429000 - -11.8  -4.14392   GTGTAAGCCGCAAAA              GGCCGC CCGC GCGGCC               GGCTTGCGGCGGGCC  85 330
 IUJ48_24785 5410755 .. 5410768 -  -2.3  -3.63922   ATTGTTGGCAAAACA               GCCGA TAAA CCAGC                TTTTTACGCCAATTC  50 61
        aroQ NONE
 IUJ48_24775 NONE
        accC 5408343 .. 5408360 - -14.1  -4.30978   GTTAAGGCAGTAAAA             GGGGGGC CTGA GCCCCCC              TGCTATCGGCTGGTC 100 39
        prmA NONE
 IUJ48_24760 NONE
 IUJ48_24755 5404817 .. 5404832 -  -6.8  -3.76775   TGCAACACACTGAAA              CGCACCG CCA CGG-GCG              GAAAACCAGCTTGCG  62 146
 IUJ48_24750 5404186 .. 5404201 - -11.8  -5.63103   CCGGAACGAAAAAAA              GCCCGC ATGC GCGGGC               TTCGGGGGGTGGCAG 100 53
 IUJ48_24745 NONE
 IUJ48_24740 NONE
 IUJ48_24735 NONE
 IUJ48_24730 5401063 .. 5401079 -  -2.1  -2.64803   TCAGGTCGAAACGCA              TGCCGAA ACT CCCGGCG              TCAGATGGGGCTGCG  38 26
 IUJ48_24725 5399556 .. 5399593 - -11.4  -5.00616   GGGCGTCTGAAAAAA  CGGAAA-CGGCCC-GGCA ATAC CGCCCGGGCCATTTTCCG   CCATGCGCCGCAACC 100 47
 IUJ48_24695 5388937 .. 5388972 - -19.8  -2.85583   GCAAGACACCCAAAT    GCCAAAAGGCGGCCGC CCGC GCGGCCACTTTTTGGC     GACCCCGCAAGATCC 100 338
 IUJ48_24680 5385603 .. 5385614 -  -5.8   -3.0263   ATGACTTCCTCAACA                CGTC TGTC GACG                 CGCCGCGCCGCTCAA  48 189
 IUJ48_24675 5384981 .. 5385006 -  -2.4  -3.22298   GGGATGGAGGACGAA         GTCCGCACCT TACCGC AGGCGCGCCC          GCTTGGCGACGCCGG  44 102
 IUJ48_24670 5383709 .. 5383735 -   -15  -4.72272   TCCGCCCACGAAAAA         GCCCCGTCCGGC CTG GCCGTTCGGGGC         TTTTTTCATCGCGCA 100 50
 IUJ48_24660 5379370 .. 5379384 -  -7.1  -3.14132   CCTGCGCGTCACCAA               GCGCT TCTAC AGCGC               CATGGCCACGGGATC  53 359
        pmbA 5373307 .. 5373318 -  -5.8  -3.39732   CAAGGATTGCAAAGA                GCGT TGTG ACGC                 GGTTCCCGGGTCAGG  53 36
 IUJ48_24620 5371919 .. 5371945 -  -3.6  -5.00616   TTTTTTTGTAAAAAA         CACGGGGTTATC AGC GAAAACCCCACC         TCCAACCGAATGCCA  81 61
 IUJ48_24615 5370502 .. 5370541 -   -28  -4.91109   GTCCTACGATAAAAA  GCGCCTTGCGGACGACAG CTGG CCGCCGTCCGCAAGGCGC   ATCCCCCCGCGCGGG 100 53
 IUJ48_24605 5368559 .. 5368589 -  -3.8  -2.72461   GAAGCTCTTGGAAAC       GGAGGTCAGCTCAA GCA TGGCGCTTGCCTCC       TTGACGCATCCAGCG  42 5
 IUJ48_24600 NONE
 IUJ48_24595 5367007 .. 5367056 -    -7  -3.57144   TGTCGCATTTTTAAA GGGGACGCAAGTGCACGCCGCCGGG AAC CCCGCCAGCGCTC-CA-GCG-CCCC TTCCCCGTTCCACCG  59 47
        rplM NONE
        rpsI 5365854 .. 5365870 - -10.8  -5.81412   GGCATGTAAAAAAAA              GCCCGC ACGAG GCGGGC              TTTTTTCGCAGCGAT 100 40
 IUJ48_24580 5364600 .. 5364657 -  -3.2  -3.14132   GGCGTCGCGGAGGAA TCGTTGGACATGGGGAGCGGGCCGGCGG CACA CCGCCGGCCCGG-CCGGACGT-CAGGGC AGGATCGCGACCTGG  43 19
 IUJ48_24575 5363846 .. 5363888 -  -7.7  -2.81133   CATGTAGTCACTATA GCGCAGCGCC--GCCCGGACT CAA AGTTCGAGCTTGACGCTGCGG GAGGCGCGGACCACA  52 1
        erpA 5363326 .. 5363347 - -15.9  -4.91109   CCCGCACGACAAAAA           GCCCTTCGG AAAA CCGAAGGGC            TTTTTTTGTGGCCGA 100 85
 IUJ48_24555 NONE
 IUJ48_24550 5358447 .. 5358466 -   -15  -5.63517   CCGGGAAATAAAAAA            GGGCCGCA TTGA TGCGGCCC             TTTTTGCTGATCGCG 100 46
 IUJ48_24540 5356254 .. 5356277 -   -16  -5.07652   GGCCCGAAAACAAAA          GGACGGCCCC TTGC GGAGCCGTCC           TCGTCATGTGCCGGC 100 61
        nrdR 5355178 .. 5355218 -  -6.9  -3.05384   CGCGTGGCCAGTGAA GTGGC-GCGCGACA-TGGT GGTCT ACCAGCGCCGCGCCGGCAC CGACTCGGCCCTGTC  48 434
        ribD 5352248 .. 5352269 -    -5  -3.80018   GTGACACAGGAAGAA           CGCAAGCG CTATGC CGCCAGCG            AGGCGCGCCCCAACG  58 432
 IUJ48_24505 NONE
 IUJ48_24500 NONE
 IUJ48_24495 5343341 .. 5343360 - -10.7  -5.27335   CGGGGTAAAGAAAAA            GGGGACG TTATTG CGTCCCC             TTTTGCCGCAGGCTC 100 95
 IUJ48_24490 5343092 .. 5343116 - -10.8   -5.4505   GCGGGCAACAAAAAA         CCCGCA-GAAC CAAT GTTCATGCGGG          TTTGTGACATTGCCG 100 70
 IUJ48_24480 5341676 .. 5341688 - -10.5  -3.53224   GACTTCCCTGGGAAA                CCCGG CCA CCGGG                TCAACACAACTTTCA  69 77
 IUJ48_24475 5340557 .. 5340575 -  -5.9  -4.18018   CGCCGCCATGCAAAA             GCCCTGG GCCTG CCAGGGA             TTCAGGGCAAATCCG  66 118
 IUJ48_24470 5339682 .. 5339735 -    -6   -4.4078   GCTGTCCAAGGAAAA CCGCTGC-GACCTGCAT-CCG-CGCTG GAG CCGCGACGGCACCCAGGTCTGCATCGA TTCCGTGCACGAAGG  75 138
 IUJ48_24455 5336434 .. 5336455 -  -5.7   -3.2794   GTTGAGTGACAGCAA           CCACCCCGG CGTT CCTCGGTGG            TCGGGCCGAGCGCTT  51 43
 IUJ48_24450 5334694 .. 5334712 -  -4.4  -3.86346   CGAGTCGGCCATAAA             GGCAAGCG TTT CGCGTGGC             TGCAGTGGTCGATGG  58 162
 IUJ48_24435 5328850 .. 5328870 - -10.3  -3.64703   CCTTCCCGACGCAAA            CCGCGGCGC GGC GCCCCACGG            CGGTACCGTCGCTGG  71 43
 IUJ48_24420 5326541 .. 5326565 -  -2.8   -4.2558   TACCTCGTACGAAAA         CCGCA-AGC-CC TGA GGCGCCGCGCGG         GTCGTCAGCCGACCT  64 30
 IUJ48_24410 5325089 .. 5325105 -  -2.2  -3.90707   GTTGATTAAAAAAAG              GCGC GCTCCAATT GCGC              ATGCACTTATGCTAA  55 67
 IUJ48_24405 5324176 .. 5324197 -  -3.6  -4.08216   GTATCCCTGGCAAAA           GGCCGGAC TCAGGC GTCCAGTC            CGATATCGAGCACCT  60 12
 IUJ48_24400 5323072 .. 5323114 - -12.5  -3.06315   GGAACAGCTGGAACA GCACGCGCG-CGCGGCGGCC TGAC GGCGGGCGCGTCGCGCCAGC CCGCAGCGGCGGGGC  69 80
 IUJ48_24390 5321562 .. 5321576 - -11.4  -3.13403   CCGGCCCGATCAAGA               CGCTGG CTG CCAGCG               GCATCAAGGACTTCT  64 287
 IUJ48_24370 NONE
        rnhA 5317253 .. 5317277 -  -5.6  -4.09685   CCGCATCGGTGAAAA         CACGGAG-CCG TTGA CGGACGCCGCG          GCGCCCCGGCGGGTC  66 43
 IUJ48_24360 NONE
 IUJ48_24355 NONE
        dnaQ 5312052 .. 5312073 -  -7.3  -2.85565   AGAGGCGAAATATTA           GCACGCTTT TTTG AAAGTGTGC            AAGTCGCCTCGAAAA  52 45
 IUJ48_24345 5311835 .. 5311854 -  -9.3  -5.79595   GCGCAAAACAAAAAA            GCCAACC GGCTAA GGTTGGC             TTCATTGTCGCTCGG 100 129
 IUJ48_24340 5311179 .. 5311192 -  -3.7  -4.57073   CAGGTGCTGGAAAAA               GGCGC CATG GCGCT                GAACCCGCGCGGCGA  72 252
 IUJ48_24310 5305904 .. 5305948 -  -2.5  -3.05384   GCCGGCGGGATCCAA TCGGAACGCGCCGGCCGTTGC ATC GCGGCGGCCATCAGGATGCGA CCTTGTCAGAATGGG  42 15
 IUJ48_24305 NONE
 IUJ48_24295 5303112 .. 5303128 -  -7.9  -3.57144   CTGTTTACGCTGAAA              GGCGCCT CGC AGGCGCA              GCCAACTACCAGGGC  63 42
 IUJ48_24285 5301282 .. 5301319 - -14.1  -2.56596   CGCTGGAGCAACTGA   TCGCCGCCAGCGCCGCGC GTC GCGCCACGCCGGCG-CAA   CGCGCCCAGATCGTC  66 333
 IUJ48_24235 NONE
 IUJ48_24230 5291845 .. 5291860 -  -2.5  -3.85698   CGGGTGCTGCACAAA              CCCTGG GCGAT CC-GGG              CCTTCAACATCACCA  56 149
 IUJ48_24215 NONE
 IUJ48_24210 5288348 .. 5288379 -  -5.1  -3.60627   CCATGCTACCGGAAA      CCCGCCAGGTTCAC ATCAA GCGAACCCGG-GGT      CCTTGATGCGCGTCA  55 38
 IUJ48_24205 5287760 .. 5287778 - -11.7   -4.8048   CGCGGACATGAAAAA             GCCCCTC GGCGG GAGGGGC             CTGGCATGCGTCGGC 100 87
        fusA 5285406 .. 5285427 - -17.3  -5.72622   GCGAGAAAGAAAAAA           GGGCCACCC GCGC GGGTGGCCC            TCGTTACGGGCAGCT 100 47
 IUJ48_24190 5283365 .. 5283400 -  -2.4  -3.01712   CGGCGCGCTCGAAGA    GGGCCTGGCGCTGT-TC GTC GACACCGTGACAGGGCC    GGACACCTGGCAGCG  41 342
 IUJ48_24180 5282094 .. 5282110 - -13.7  -2.75064   CTGCCGAGGTAATCA              CGCCAGC GTC GCTGGCG              GCTGTATATGGAGTG  67 169
 IUJ48_24125 NONE
 IUJ48_24120 NONE
 IUJ48_24115 5270336 .. 5270346 -  -2.4   -3.5511   CCTGATGGAGAAAGA                 TGCG TCG CGCC                 ACGCGGCTCGGGGCG  47 63
 IUJ48_24110 5269685 .. 5269700 -  -3.2   -3.0169   AAGCTTGAGAAATCA              TGGCGT ATCA ACCCCA               GCGAAACAGCGGCAG  42 17
 IUJ48_24105 5268109 .. 5268140 - -21.7  -2.92102   AGACGGCGCACAAAT      CAAACGGCCCGGC GTGAAG GCCGGGCCGTTTG       CGCTGCGGACAATGC 100 47
 IUJ48_24100 5267101 .. 5267114 -  -9.5  -3.44146   CGGCTGGAGAAGCAA               GGCGC CACG GCGCC                CGCCGCTCAGTAGCC  65 32
 IUJ48_24090 5265398 .. 5265416 - -11.7  -5.21709   GCCGACATGAAAAAA             GCGGACC AGCCG GGTCCGC             TTTTTCGTGGCGTTA 100 38
 IUJ48_24065 NONE
 IUJ48_24060 NONE
        ssrS NONE
 IUJ48_24050 5258130 .. 5258159 -  -6.3  -3.14132   GTGGTTCTCTAGCAA       GCCGCGCCC-GCTG GGG CAGGTGAGCGCGGT       CTTCCTGATGGGCTA  50 172
        ilvD NONE
 IUJ48_24035 NONE
        msrA 5254284 .. 5254315 - -10.8  -3.42699   AGGCACCGAGGAGAA      GGGCCAGATCCAGG AATA CCTGGACCTGTACC       GTGGCGAAGGCATCC  69 475
 IUJ48_24020 5252835 .. 5252875 -  -7.3  -3.05498   CACCCTATATATACA  GAGCATCACGGACGGGAAG CTT CCAGCCGACCGCGGCGCTC  TCCGATCTCTATATA  55 85
 IUJ48_24015 5250000 .. 5250035 -  -4.6  -3.38272   GATCAGTAGTCAGAA    GTCATGGACACAGGGA GGAG TCCCTCTACCCAAGCC     CACAACCGATCCCAG  51 93
 IUJ48_24010 NONE
 IUJ48_24005 5249713 .. 5249763 -  -7.6  -4.25283   AGCTGTTGAGTAAAA CCCAACTCATAAGACCGGGCAGAT ATT ATCCGCACGACACTATGAGTTAGC CTCTACATCCCACCA  75 52
 IUJ48_24000 5246431 .. 5246446 -  -3.3  -2.87881   TAACGGGTTGAGAGA              TTGTC TTTGGG GACAA               CCGCTCCAATCTTGG  41 192
         rrf 5246257 .. 5246290 - -24.1   -4.8667   CACACGCCACAAAAA     CAAAACCCCACAGGC GCGA GCCTGTGGGGTTTTG      AGCAATAAAAGCCTG 100 36
 IUJ48_23990 5245551 .. 5245570 -   -15  -4.54727   CGCTGTAAATGAAAA            GGCCGACG GTGA CGTCGGCC             TTTCTAACGGAAATC 100 49
        gcvA 5243523 .. 5243541 -  -8.8  -3.72642   AAGTAAGCAGGCAAA             GGGCGTAC CCC GTACGTCC             CTGCCTCGATACTGT  67 311
 IUJ48_23970 5241884 .. 5241904 -  -2.5  -2.98823   TTTTGCGTAGACATA            TGGAAGCTT CTT AATCTGCCA            GCGGCATGCCCCGTT  41 15
        pyrC 5240492 .. 5240511 -    -7  -3.14132   CGCGCGGCGGACGAA            GCCGCGGC CCGC GCCAAGGC             CGCCAAGCCGAAACC  53 332
        rnpB 5238389 .. 5238400 -  -2.2  -5.75342   CGGGGCGAAAAAAAA                GC-CC CGT GGCGC                CGCGCGCCGGTTGAA 100 46
        mraZ NONE
        rsmH NONE
        ftsL NONE
 IUJ48_23935 NONE
        murF NONE
 IUJ48_23925 NONE
 IUJ48_23920 NONE
        ftsW NONE
        murG NONE
 IUJ48_23905 NONE
 IUJ48_23900 NONE
 IUJ48_23895 NONE
        ftsA 5222203 .. 5222214 -  -3.6  -3.55622   GTGAATCGCCTCAAA                GCCG AAGC CGAC                 TGCTTTGGTCCGCAA  49 128
        ftsZ 5220856 .. 5220914 -  -8.7  -5.07011   CATACAAACGAAAAA CGGACCGCTCCGCCTCCGGCCTGCCCGC GGGG ACAGGCAGGCCGGAGATGAGGGAGTGC- ATAGGAGCCTGAAAC 100 53
 IUJ48_23880 5219721 .. 5219761 - -12.7  -4.56914   CCATCCAAATGAAAA TGGCCGGTAGTCAGCCGGGG ACGA CCCCGGC-G-C-ACCGACCA TCAGCGGCAAGCCGG 100 43
 IUJ48_23870 5218018 .. 5218037 - -10.7  -3.01791   ACCTGGCGCGTAATA            GCCTGGC ACTATG GCCAGGC             AGGCACTGTAGCCCG  62 50
        secA NONE
 IUJ48_23860 5214380 .. 5214396 -  -2.1  -3.18735   GGAAGATTTCAGGAA              GGGGAAG GCG CCCGCCC              GGCGATCGCGGGCGG  44 48
 IUJ48_23855 NONE
 IUJ48_23850 NONE
 IUJ48_23845 5210709 .. 5210730 - -17.3  -5.15634   GAGCCCATGAAAAAA           GCGGGGCCA ACCC TGGCCCCGC            TTCGCATTCCCTGCC 100 47
 IUJ48_23835 5209155 .. 5209165 -  -4.6  -3.16564   CGTCCACCCGAGGAA                 CACC CTA GGCG                 GCCCTTGGCGCGGCG  47 41
 IUJ48_23830 5208550 .. 5208608 -  -4.4  -5.60993   CGCCGGAGAAAAAAA TTGCGTCCGGGCGCCAGGCCGCCGCCACG GGCC CGC-GCGGCGCCGCGGCGCGGGGACAC-- GCCGCCCGCGGGCCG 100 49
 IUJ48_23825 5207458 .. 5207483 -  -7.5  -3.17527   CATCTACGACGAAGA         CGGCG-ACTGGC AGG GCCTGTACGCCA         TGGCGTTCCTGGATT  53 332
 IUJ48_23800 5202652 .. 5202662 -  -6.8  -3.40403   CGTCGGCGACGACAA                 GGTC AAC GACC                 ACGTGCAGCCCACCA  55 303
 IUJ48_23790 5199626 .. 5199657 - -11.5  -3.17212   GCACGACGCCATCAA      CCGCGCCCGCGGCG TGCGG CGC-ATGGGCGCGG      CGGCGCTCGACCTGG  64 281
        mnmD 5196837 .. 5196852 -  -3.2  -5.11613   ATATCATCCAAAAAA              GGGG TCACAAAG CCCC               GGCGGGCCGGCATCC  86 171
 IUJ48_23775 5194429 .. 5194462 - -21.1  -3.81137   GCGCAAAGACGTAAA     GGGCAGTCGGGAAGG AAAG CCTTCCTGACTGCCC      TTTTTTTATCGGCGG 100 65
 IUJ48_23770 NONE
 IUJ48_23765 NONE
 IUJ48_23760 5191738 .. 5191755 - -14.1   -4.8622   CGCGCCAACGAAAAA             CGGCCGC TTGC GCGGCCG              TTCTGCATCGGAGAG 100 52
 IUJ48_23755 5191378 .. 5191396 - -11.7  -6.34424   GTCGCAAAAAAAAAA             CGCCGCT ATGAA AGCGGCG             TCTTTTCGATGCGGC 100 118
 IUJ48_23750 NONE
 IUJ48_23745 5189661 .. 5189676 -  -3.2  -3.51825   GGACCTGAAGCAGAA              CATGGA ACAC TCCGTG               ATTGCGTGAAGACGC  49 116
 IUJ48_23740 5187037 .. 5187056 -   -10  -3.29144   CCAGGCGCTGGACAA            CGTGCAGA CCGC CCTGCACG             CGGCCGGCGCCACCC  63 242
 IUJ48_23705 5181288 .. 5181319 -  -7.2  -3.27475   GGCGGGACGAGAAGA      CCTGTCCTACCCTG GCGC CATGGTAGGCAAGG       GGCGCGCGGGAAGAT  54 158
 IUJ48_23700 NONE
 IUJ48_23695 5180135 .. 5180149 -  -3.4  -4.11216   CCCCGATGCCGAAAA               CGACCC GCA GGGCCC               TTCGCATCCCAATCA  63 108
 IUJ48_23685 5178456 .. 5178504 -  -7.5  -3.05384   GGCGCGGGTATCGAA GCG-CGGCGCGACGATCG-CCTGA TCAG CCAGATCGACC-TGGCGCCGACGC TGCTGTCGCTGATCG  52 377
 IUJ48_23675 5174497 .. 5174522 - -11.2  -3.28712   CTGCGTGGCGGACAA         CCATGC-CGCG GACGG CGCGCGCATGG         CGCTGCCGCGCTGAC  68 46
 IUJ48_23660 5171389 .. 5171407 -  -2.4  -4.57073   GATCCGCCGCAAAAA             GTTGCC AGCCGGG GACAAC             TGAAGCGCCGCGATC  67 39
 IUJ48_23655 5171118 .. 5171151 -  -8.7   -5.1971   AGCAAAAAGCAAAAA     GCAAAAAGCCCACCG TTTC CGGTGGGCTAAGCGC      TTGGTACTACTAGAG 100 46
 IUJ48_23650 5169480 .. 5169502 -  -6.2  -2.76453   CTACAAGCTCAAGCA           GCTGATCGAC CTG GTCAGCCAGC           GCGGAATGTTGTTCG  46 429
 IUJ48_23640 5168854 .. 5168870 -  -7.9  -3.03443   GCACCACTATAGAGA              CATGGCC GCT GGCCGTG              ATTTAGCCTGGATGC  54 61
 IUJ48_23635 NONE
 IUJ48_23630 NONE
 IUJ48_23625 5166743 .. 5166771 -  -8.1  -3.68222   CGCCAACCTGAACAA       GGGCC-AGGCCA GCCGTT CGGCCCAGGCCC        TGGCCGGGCGCGGGC  64 315
 IUJ48_23590 NONE
 IUJ48_23585 NONE
        rsmA 5157000 .. 5157016 - -10.8  -5.55664   TCATGACGAAAAAAA              GCCCGC TGATC GCGGGC              TTTTGCTTGCCTGTG 100 52
         pyk 5154000 .. 5154024 -  -2.9  -3.56092   CCATGATGCTCGAAA         CCAT-GACGC ACTTCG GCGTCGATAG          CTTCCCCGCGCTGCT  50 283
 IUJ48_23560 5150513 .. 5150527 -  -6.4  -3.54741   CAGGATTTCTCGAAA               TTCGGC TTC ACCGAA               ATCCTGTTCCCCGGC  57 52
 IUJ48_23515 5142053 .. 5142074 - -18.7  -4.24404   AGGGAAACGTGAAAA           CGCGGCCGG CGAA CCGGCCGCG            CGCGATGGGGTGCAG 100 47
 IUJ48_23510 5140453 .. 5140472 - -16.4  -5.60993   CCGGGGATAAAAAAA            GGGCGCCG TCAC CGGCGCCC             TTCTCGCGTTCATGT 100 48
 IUJ48_23480 5131808 .. 5131846 - -10.1  -2.78384   CGCCGCGGCATGACA   CCGCGCCCGCCGCGG CTACTGTCC CCGCGCCGCGCGCTG   CACGTGCTCGATGAA  59 2
 IUJ48_23475 5130222 .. 5130237 - -11.8  -4.09864   ACGTAGGCCTCAAAA              GGCCGC CCGC GCGGCC               GCCTTGACGCGGGCC  85 309
 IUJ48_23445 NONE
 IUJ48_23440 NONE
 IUJ48_23435 5121593 .. 5121631 -  -8.7  -3.11088   AACTGATCGAACAGA  TCCGGCAGCCGGCG-GCC GCGT GACGCGCTGGCGGCGGGA   GGCGCCCCAGCCGTC  57 105
 IUJ48_23425 NONE
 IUJ48_23420 NONE
 IUJ48_23415 5117723 .. 5117744 -  -9.3  -3.30124   TTGTAGGCCGGACAA           CGCCGGACG GGAT CAACCGGCG            CTGGCTTCGCCGGCC  64 16
 IUJ48_23410 5116688 .. 5116715 -  -8.3  -2.62184   GGCTCGGCGACATCA        CCGACCAGCCG ATCGAA CGGCTGGACTG         AACAGCGCCTGGCGG  53 93
 IUJ48_23385 5112040 .. 5112056 - -10.8  -5.27938   ACTGCGAAAGAAAAA              CCCGCC ACCAG GGCGGG              TTGTTGATTGCGAGG 100 50
 IUJ48_23365 5107586 .. 5107597 -  -2.2  -4.21989   TACAACGTGAAGAAA                CACC TGAC AGTG                 GCGATGGGAGTCTAC  61 227
        fumC 5101552 .. 5101569 - -14.1  -5.78622   GGACCTGAAAAAAAA             GCCGCCC TACT GGGCGGC              TTCGTGTTTGGCGAC 100 48
 IUJ48_23335 5099320 .. 5099335 - -11.8  -6.23545   CGCAAAGAAAAAAAA              GCGCCC CGCG GGGCGC               CTTCTCTGCCAGGCC 100 73
         ggt 5096429 .. 5096455 -   -10  -3.36273   GCGCTGGAATAGGAA         GGCGCGCCAAGC CCT GCCTGGCGCGGG         GCCTGCCCCGGCCCA  67 76
 IUJ48_23300 5089344 .. 5089357 -  -3.1  -2.79023   CAAGCGCATGAAGCA               CGTGCG GCC CG-ACG               AGGTGCGCGCCGGCA  39 459
 IUJ48_23265 5082834 .. 5082848 - -11.4  -3.37017   AAGGCCGAACAGGAA               CGCCAG GTG CTGGCG               CTGGTGGACCGCTAC  66 438
 IUJ48_23230 NONE
        macB NONE
 IUJ48_23220 5072884 .. 5072900 -  -7.9  -3.62096   TTGCATCAGGTGAAA              CCGTCCG AAT CTGACGG              CATGGGCGACGATTC  63 204
 IUJ48_23215 5071736 .. 5071772 - -25.4  -3.62591   TCTAGAACGGCGAAA    GGCCTATCACGTTGCC TTATG GGCAACGTGATAGGCC    CAAAAGGTAACGTGG 100 81
 IUJ48_23210 5070691 .. 5070713 - -12.8  -5.68438   TTACGAAATAAAAAA           TGCCCGATGA AAA TCATCGAGCA           CCACTTCTGCCAGGA 100 87
 IUJ48_23200 5069966 .. 5070000 -  -7.9  -3.15544   CGGGAGTGTCAGTAA     TTCGCATCGATCACA TAGTC CGAAATCGACGCGAA     TAGCTTCGACAACAA  55 80
 IUJ48_23195 5069622 .. 5069639 -  -5.5  -3.07816   TCCTGATTGATTCAA             GCCATTG ATGC CATTGGC              TGTTCTCCAAATGGG  49 65
 IUJ48_23190 5068611 .. 5068669 -  -9.5  -4.87665   CCCTAGCCATAAAAA GCTATGGTCAGCCCGTTCCCCGCGAAGCG CTA CGCCTAGCGGGGTTCTGTCTGACCAT--C TTTATTAGGCCCGGC 100 104
 IUJ48_23185 5066353 .. 5066371 -  -4.4  -3.38683   AGACCGAAAAGGTAA             CGTACGGG CAA CCCACCCG             AAGGCGGTACTCACT  49 522
 IUJ48_23180 5065301 .. 5065319 -  -8.1  -5.67967   ACGATCATAAAAAAA             CCCGACG GAACG CATCGGG             TTTTTTTCGGAAAGG 100 74
 IUJ48_23175 5064568 .. 5064612 - -12.9  -2.66451   ATCGATTCAAATGTA TTCGATAGCGGGTTATAGCCA AAC CGGCAATGACCCACTATCGAT CGGAACTTGCTTAGT  68 36
 IUJ48_23170 5063819 .. 5063833 -  -3.5   -2.7976   CGGAACACCGGAAAT               CAACG CCTTT CGTCG               CAATGGCAGGGTTCA  41 10
 IUJ48_23165 NONE
 IUJ48_23160 NONE
 IUJ48_23155 NONE
 IUJ48_23150 5058498 .. 5058538 - -11.2  -3.30441   GACCACGGTCTACAA CGTCGGCCG-CTACCTGGAC GTG ATCC-GGCAGACGCCCGACG GGCTGAAGTTCGAGT  66 470
 IUJ48_23125 5055576 .. 5055605 -  -9.2  -3.07994   GGCAACGTCAGCGAA       CGCGTGCTGACC CTGGCC GACCTGCACGCG        GCCGACGAGATCCGG  55 126
 IUJ48_23105 NONE
 IUJ48_23100 5046360 .. 5046372 -  -4.7  -2.74792   CGACGATGTCGAAAT                CAGCC ATG GGCGG                CCTCGCGGGTGCGGG  44 12
 IUJ48_23095 5045369 .. 5045394 - -14.7  -5.81412   CTGATCGAAAAAAAA         TCCCCGCTGGT GCGA ACCGGCGGGGA          TTTTTGTTTGGGCCG 100 74
 IUJ48_23085 5042356 .. 5042370 -    -7  -3.68988   GCTGATCGAACAGAA               CGCGCG CGC CGCGCT               GCAGGTGGCCGATTA  64 216
 IUJ48_23010 5024333 .. 5024343 -  -8.2  -3.14463   AACGCGCCTCATCAA                 GGGC TCG GCCC                 CTGGCGGCCGGTGCC  57 44
 IUJ48_23005 5022519 .. 5022544 - -14.7  -4.35524   GCGGGAAAGGCAAAA         CGGCGAAGCCC CGCG GGGCTTCGCTG          TCTGGTTAGCCGGGG 100 46
 IUJ48_23000 5021504 .. 5021536 -  -3.1  -2.57564   CCAGCGTTTCAGAAC      GGCGCGCATCAGTGG CCA CCTCCGCCGCGGGTC      AGCCCGGAGCGCAGG  39 1
 IUJ48_22995 NONE
 IUJ48_22990 NONE
 IUJ48_22985 5018176 .. 5018195 -   -10  -4.90266   GCCACCAAGCAAAAA            GGGCTTCC CAAA AGAAGCCC             TTTGCCAAAACCACT 100 445
 IUJ48_22970 5015415 .. 5015431 - -10.8  -3.61715   CACCTGGCCGAACAA              CGCGCC TGGCC GGCGCG              GCCGCGCCAGCCCGA  71 273
        ettA 5012976 .. 5012997 -  -8.7  -5.78622   TCATCCGAAAAAAAA           TCCCGGC GCGCAATG GCCGGGA            TTTTCGCACCGCCTG 100 51
 IUJ48_22955 NONE
 IUJ48_22950 5012295 .. 5012305 -  -3.2  -2.80816   GCGGTATCGACGATA                 CGGT ACG ACCA                 TCACGCCAAACCGCT  41 45
 IUJ48_22945 5011632 .. 5011642 -  -2.4  -2.80098   AGGATCGCAAAATAT                 CCCG TCC CGCG                 GTGTTAGGTTTGCCC  40 107
 IUJ48_22940 5011235 .. 5011253 - -17.4  -5.04601   GCCACAAAGCAAAAA             CGCCCGGC AAT GCCGGGCG             TTTTTGCGTTTGGCA 100 81
 IUJ48_22915 NONE
 IUJ48_22910 5004084 .. 5004108 -  -4.2  -4.21933   CGAATCCGAAAAGAA         GGC-CCGCTCC GGCA AGAGCGGCGGC          AGCCGCGCCAAGGCC  63 398
 IUJ48_22895 5000230 .. 5000240 -  -4.6  -3.31792   GCATCAGGGCGAGAA                 CCGG TAG CCGA                 TGCCCCAGACGGTCT  51 3
 IUJ48_22890 4998620 .. 4998668 -  -7.4  -2.73483   ATCGTACCGTAACCA CCGCCCCC-CCGGGAC-CGG ATTCCGCCCCG CCACGCCCTGGCGGGGGCGG GGTCAGGCGCCTTCC  51 28
        ruvB 4997455 .. 4997485 -  -9.6  -3.96148   CCTCCGGATCATAAA       CCCGTGGCGGCG TTCCCGC CGCCGCCACGCC       CGGACGGTTTACTTG  75 34
 IUJ48_22880 4996396 .. 4996427 -  -9.4  -3.53343   AAGCGCGCGGCCAAA      GCGCCGGACG ATATCCCGCCGA CGCCCGGCGC       CGACCCTCAGCTTGC  65 32
 IUJ48_22875 4995276 .. 4995307 -  -9.4  -3.67564   AAGCAGGCATTGAAA      GCCCTGGTG-CGC TGAAGGG GCGCCACCTGGGC      CGCGCCGCCCGCAGA  68 118
 IUJ48_22840 4989196 .. 4989218 -   -12  -2.71731   CTGATGCGCGAATGA           TGGCGCGG GCGGGCG CCGCGCCA           GGCCCGCCCGCGGGG  65 85
 IUJ48_22830 4986437 .. 4986462 - -17.6  -5.40072   TTGCGCGCAAAAAAA         GGCGCGAGGC CGCGGT GCCTCGCGCC          CTTGCCCGGTCACGC 100 35
 IUJ48_22825 4985326 .. 4985338 - -10.5  -2.82759   AAGACACGGACGACA                GGCGC CAG GCGCC                GCGCGCGGGCAGCAC  60 382
        mgtA NONE
 IUJ48_22815 4981273 .. 4981306 - -10.2  -3.01712   GTTCGGGCCGGAACA     CGCAGCCGGGTCGA TTGTAG TAGACCCGGCCGCC      CCCGTACGGCTCAGA  62 36
 IUJ48_22810 4980250 .. 4980268 - -10.2  -3.62046   CGACTGCGGCAACAA             GGCCGGGA TGT TCCAGGCC             ACCGTGGCGCTGGGC  67 99
 IUJ48_22800 4977458 .. 4977482 -  -7.1   -3.0263   ACCACTTCCTCAAGA          CCCTCAAGCAC AAG GTGCTGGAGAA          AGCCCATCGCTACCC  52 430
 IUJ48_22775 NONE
 IUJ48_22770 4973619 .. 4973646 -  -9.1  -2.52543   ACGGCCGGTAATCGA        CAGCCTGCAGC AGCGCA GCCGCAGGCTT         GCGCCCGTCTACGTG  51 173
 IUJ48_22750 4968027 .. 4968043 -  -9.3  -3.57783   TCAGGACAACCAGAA              CGCGCGC CAC GCTCGCG              CGGCCACGTGCGAAC  68 163
 IUJ48_22745 4966422 .. 4966438 - -13.7  -5.24989   GCACATATGAAAAAA              GCGCCCT GCC AGGGCGC              TTTTCCGTTGGGCGC 100 78
 IUJ48_22735 NONE
 IUJ48_22730 4964177 .. 4964195 -  -5.2  -3.93038   CACCGGAAGACCAAA             CTTGCGGC AAC GCAGCAAA             CAGTTCTTTCCCGTA  60 123
 IUJ48_22725 4963217 .. 4963243 - -13.7  -4.65895   CCCGGCAGTGAAAAA         GCCCCTCGGTT GCTGA AACCGCGGGGC         TTTTTCGTTGGGGGA 100 54
        phaP 4961107 .. 4961129 - -11.3  -5.50499   CGACAGGCAAAAAAA          GAGGCCACCC CGAG GGGTGGCC-C           TAATTCCAGCTCTGC 100 99
 IUJ48_22685 4956212 .. 4956241 - -17.8  -3.19192   CTCCAGGTAAGCCAA       GGCGGCCGGCCC ATTCTA GGGCCGGCCGCG        CCGGGGACGATGCCC  91 72
 IUJ48_22680 4955321 .. 4955349 -  -2.3  -3.31144   CTGGTATTTCCAGAA       CGGGCCGCAACG CGTGTT CGT-GCGGCTGG        ACGCGGCGCCATACG  45 415
 IUJ48_22655 4952396 .. 4952414 -  -7.5  -3.67954   GAAAGACATTGCAAA             TGCAATC TCCGC GATTGCA             CATACAAGCTGGATA  63 44
 IUJ48_22650 NONE
 IUJ48_22645 NONE
 IUJ48_22640 NONE
 IUJ48_22635 NONE
 IUJ48_22630 NONE
 IUJ48_22625 4947089 .. 4947105 -  -4.3  -2.95234   TCAACAAACCGAAAT              GAGCCGA CCC CCGGTTC              TGTGCGCGCTGGCGG  44 362
 IUJ48_22620 NONE
 IUJ48_22615 4945651 .. 4945672 -  -8.6  -3.34398   GTGGTGGTTGAAATA           CCCGTGCC TCGTTG GGCTCGGG            CGCGTGCTCGGATGG  60 50
 IUJ48_22610 4944981 .. 4944992 -  -7.2   -4.0274   GGCAGCAGCAAACAA                GCCG CATG CGGC                 AGCGACCGCTTTCAC  67 216
 IUJ48_22605 4942607 .. 4942652 - -24.9  -3.21218   ACCGCTGACCACGAA GGGTCTCCCGGTGGCTCGTGCA GCC TGG-CAAGCCACCGGGAGACCC TTCGCAGAGGGCGGA 100 242
 IUJ48_22585 NONE
 IUJ48_22580 4936286 .. 4936298 -  -3.3  -4.87291   CATTGGAACGAAAAA                GGCCA GCA TCGCC                GTGATGGACTTTCAT  78 255
 IUJ48_22575 4935829 .. 4935857 - -14.6    -5.055   CGAACGCGGAAAAAA        GAAAGCCCCGCA ATAAG TGCGGGGCTGTC        AGGAGGATGAGGCGA 100 48
 IUJ48_22570 NONE
 IUJ48_22565 4934833 .. 4934873 -   -17  -4.36914   TGGGCGGGGAGAAAA CGCGAGGGACATG-GCCTC GAAC GAGGCGCATGTCCCTCATG  GGGTCCCGTGAACGC 100 68
 IUJ48_22560 4934042 .. 4934059 - -11.3  -4.27211   TGGAAAGAAAGGAAA             CAGCGTC AGGT GACGCTG              ATCGTTGGCGTTTGG  88 13
 IUJ48_22555 4933147 .. 4933189 - -13.4  -3.53091   ATCGCTCCTGTGAAA GTGCGCCGGCCCGGCTCTC TGGCGG GAGA-CCGGGCCGGCATGC GGTGAGGACAAGGAA  78 62
 IUJ48_22550 4932826 .. 4932841 - -10.4  -5.06414   TGCGGGCAAGAAAAA              GCCCCT CGAA AGGGGC               TGGAGGAATCAGGCT 100 34
 IUJ48_22545 4931625 .. 4931650 -  -9.7  -4.14257   TGGAAGAATGAGAAA         GGCCTCCATCC GATG GGATGAAGGGC          CTGTAGTGCACGCGG  76 112
 IUJ48_22540 4931415 .. 4931427 -  -5.5  -2.91582   GACGCTAGTGAGAGA                GTGCA ACG CGCAC                CATGGCAATGTTTCC  48 2
        merT NONE
        merP NONE
        merA 4928588 .. 4928603 -  -7.5  -2.59683   AGGGGATCGGACAAG              GCCGC GTAGAT GCGGC               GGTTGGCGCGGCTGT  50 69
 IUJ48_22510 4927265 .. 4927283 - -11.6  -4.43307   GTGCGAACAAAAGAA             GGCCCCCG ATG CGGGGGCT             GCGAGGCGGTTGCCG  90 43
 IUJ48_22505 4926488 .. 4926519 -  -9.4  -3.69354   GTTGATAAGGCGAAA      GC-ATCCGCCACCAG AGG CTGGTGGCCGCTCGC      GGAAGGATGCGGTGC  71 215
 IUJ48_22500 4925376 .. 4925399 -   -16  -3.41126   TGAGAAATTCGACAA          CCGCGTGGCC GTGA GACCACGCGG           AACTCGGGGGATGAA  88 119
 IUJ48_22495 4924485 .. 4924511 -  -9.3  -3.86202   GTGGATGAGAGGAAA         TGGCCTCGCCC GAGGT GGGCGAGGTCC         GCGTGGCATCACGCC  73 34
 IUJ48_22490 4923713 .. 4923728 -  -8.2  -3.71848   CGGGTGGATGAAGAA              CACCGC GCAT GCGGCG               TCTGCGATCACGCAG  67 33
 IUJ48_22485 4923245 .. 4923257 -  -4.7  -3.61398   CCCCGTGGGGAAGAA                CCCCC AGC GGGTG                ATGGAATGCCGCATC  55 68
 IUJ48_22480 NONE
 IUJ48_22475 4922465 .. 4922499 - -17.8  -2.76046   TGAACGGGAACAGCA     CCGCCCGCTGGGGCAA GTA CTGCCCCAGGGGGTGG     AAGAAAACCGCTCAG  84 37
 IUJ48_22470 4921753 .. 4921778 - -11.1  -3.44848   GGCGGGGATGAAACA         CGGAAGTACGC CAAG GCGTGCCTCCG          AGGGTGGGTCAAGCC  72 34
        ltrA 4919349 .. 4919364 -  -6.8  -3.55622   CTCAAGCCTTTCAAA              GCTCGC TTTC GCGAAC               CGGCTTCACTACCTT  57 5
 IUJ48_22460 NONE
 IUJ48_22455 4917772 .. 4917804 - -23.5  -5.40072   GCTCCTTCAAAAAAA      GGGGCACTTCTCCCC ATC GGGGCGAAGTGCCCC      GGTGGGTGGATAAAC 100 48
 IUJ48_22450 4917356 .. 4917396 - -11.2  -3.90762   GATGCTCCAAAAAGA CGGGGCATG-CATCACTCCC CAT GGG-GCGGTGACATGCCCCA GGGTGGGAAGGAAGA  79 79
        ltrA 4913921 .. 4913948 -  -6.2  -3.61517   ATCCCCCCCTAAGAA        CCGTACGTGAGA GTTT CCCCTCATACGG         CTCAAGCCTTTCAAA  57 36
 IUJ48_22430 NONE
 IUJ48_22425 4911647 .. 4911662 - -11.8  -4.41047   ATTGCCCAAGGAAAA              GGCCCC GAGC GGGGCC               TGTGAAGTGGATGCG  95 55
 IUJ48_22420 NONE
 IUJ48_22415 4910276 .. 4910289 -  -3.7  -3.33696   CCTCGGTTCAAGGAA               TCGCC ACGC GGCGC                GTCTGGCCGTCGGCC  49 4
 IUJ48_22410 NONE
 IUJ48_22405 NONE
 IUJ48_22400 NONE
        traD NONE
 IUJ48_22390 4905351 .. 4905373 -  -5.5  -3.19081   CATGGAAGCAAGACA           CATCCACGT TTGAG ACGCGGGTG           TCGAAGCGGTTGCGG  51 119
 IUJ48_22370 4901958 .. 4901973 -  -3.2   -3.4252   CTTCACCTACGAGAA              CGAGAC GATC ATCCCG               GCCGAAAGCGTGTAT  49 508
 IUJ48_22330 NONE
 IUJ48_22325 NONE
 IUJ48_22320 4896629 .. 4896639 -  -2.4  -2.62396   CACCTGCTTACAGGA                 TGCC GGT GGCT                 TCGGTGAGCAGCCAG  38 7
 IUJ48_22315 NONE
 IUJ48_22310 NONE
 IUJ48_22305 NONE
 IUJ48_22300 NONE
 IUJ48_22295 NONE
 IUJ48_22290 NONE
 IUJ48_22285 4888956 .. 4888979 -  -6.7  -3.62591   TCTACAAGTGGGAAA          CCG-GCAAGG TCACG CCTCGCGCGG          CCCAGCTCCTGCGCG  57 119
 IUJ48_22270 4887480 .. 4887502 -  -4.6  -3.16267   GCGAAGCAGATTGAA           TGGGCGGCTC ACG GCGCTGCCCT           CCGGTGCCGTTCGAT  47 11
 IUJ48_22265 4886554 .. 4886566 -  -5.5  -3.83026   CGCCCTCATAGGAAA                TCGAC ACT GCCGA                GGAACACCTGGCCCC  62 3
 IUJ48_22260 4885103 .. 4885145 -  -4.7  -3.01712   CGCGCCGGCTGAACA GCCA-GCGCAAGGGGCGC CAGGTCAT GCGCACCGCGCTCATGGC CGGCCTCCCGGATTG  46 19
 IUJ48_22255 NONE
 IUJ48_22250 4882684 .. 4882720 -  -7.2  -3.53811   GCTACCGCCCTCAAA    TCGCGCAGCGGGCAAT GCCGT ATTGATGGCCGCGCGA    CGGTGGCCATCGGCA  57 518
 IUJ48_22240 NONE
 IUJ48_22235 4880563 .. 4880577 -  -7.1  -3.85698   CCCCGCGGCCAGAAA               CTGCC CGACT GGCAG               CTCGACCCCGTGAAG  67 427
 IUJ48_22215 4878749 .. 4878762 -  -8.1  -3.05463   ATGGCGCGCACTGAA               CCACC GGCC GGTGG                GCGGTTCCCTGGGGC  55 41
 IUJ48_22190 4876524 .. 4876540 -  -3.7  -2.78384   CGGCTGGTGACGAGA              TCAGC TTTCACT GCTGA              ACTCGTTCTGGCTGC  42 9
 IUJ48_22165 4869720 .. 4869748 -  -6.5  -3.35046   CCATCTCCGGAAACA        GCTTGCCCCCCAG CGC CCGTGCGGCCAGC        GGAATGCGAAGTGTG  55 68
 IUJ48_22155 4867841 .. 4867857 -  -3.7  -2.57136   CCATGAAGCAGTAAT              GATGCAT CGA ATGGATC              CCTGCTCCCACCCAT  41 68
 IUJ48_22135 4861725 .. 4861768 - -11.8  -5.47159   TCCGAACACAAAAAA GCAGTGCTCCG-TCTTGGC ACGGATG GCCAGGAACGGAGCACTGA GGCGATCAGCATTCG 100 140
 IUJ48_22130 NONE
 IUJ48_22125 NONE
 IUJ48_22120 NONE
        hisC NONE
 IUJ48_22110 NONE
 IUJ48_22105 4854810 .. 4854847 - -14.1  -3.90112   CGTTCCTGAACGAAA   GCACGGCGGCCATGCACC ATG GGCGCA-GGCAGACGTGC   GTGACGTGGCCGCCC  88 155
 IUJ48_22100 4852648 .. 4852661 -  -3.8   -2.7083   CATTTCAGAAACGCA               CCTG GGCCGA CAGG                AACACCTCACGCCCG  42 1
 IUJ48_22095 4851274 .. 4851296 -  -2.7  -3.62695   CCGCGACAAAGAATA          GGAAACGCGG CATA CC-CGTTTTC           AAGTCGCCGCTTGTG  50 129
 IUJ48_22090 NONE
 IUJ48_22085 NONE
 IUJ48_22080 NONE
 IUJ48_22075 NONE
 IUJ48_22070 4846434 .. 4846445 -  -5.8  -3.02144   CTACTGCTGCCAATA                CCTC GGAT GAGG                 AAGAGTGGCCTTTCA  48 138
 IUJ48_22050 4842875 .. 4842889 -  -5.7  -3.56445   AACAGAAGATCAGAA               GCCAT TGACG ATGGC               CAGCCGGCCACAGAA  57 398
 IUJ48_22030 NONE
 IUJ48_22025 NONE
 IUJ48_22020 4839844 .. 4839854 -  -3.2  -3.02144   TGATGCCGTTGAATA                 CCAA CGA TCGG                 TCTATCCATGCTTGG  42 164
 IUJ48_21985 NONE
 IUJ48_21980 4828911 .. 4828931 -  -9.6  -3.64685   AAAACCGGTGAAGAA            GCGGCCGC AGTGA GCGGCCCC            AGCGGGATATCGGTC  68 168
 IUJ48_21975 4825715 .. 4825726 -    -3  -2.65354   CGCAGCGGAAACTTA                GAAT CGGT ATTC                 CAGATTGGCCGTTAT  39 11
 IUJ48_21970 4824599 .. 4824621 -  -5.4   -5.0666   TACGGAAAAAAGAAA           CCCCCTCCCC ACA AAGGCGGGGA           AGCCGAAAATCTGCC  85 216
 IUJ48_21965 4822542 .. 4822556 -  -3.5  -3.18264   CTGTTGATGGACGAA              CGC-CG GGGC CGTGCG               GTGGCACGCAGTTTT  45 226
 IUJ48_21950 NONE
 IUJ48_21945 NONE
 IUJ48_21940 NONE
 IUJ48_21935 NONE
 IUJ48_21930 NONE
 IUJ48_21925 4800983 .. 4801004 -  -2.9  -3.40403   CGGCTTTCATCACAA           TGCTCCTTC ATTT GAACGCGCA            CGTCGCTGAGTGCGC  47 11
 IUJ48_21920 4798023 .. 4798050 -  -3.4  -3.23274   GTCGGGACAAGGGAA        TGCGGGAGCAATG TCT CAATGCTCCT-CA        GAGGAAATCAGGTAG  45 13
 IUJ48_21915 NONE
 IUJ48_21910 4796060 .. 4796072 -  -2.6  -3.15544   CCGCATGCTGACCAA                GCCC CACCC GGAC                CTGGGGGATCGCGCG  43 280
 IUJ48_21895 NONE
        murB 4792616 .. 4792631 - -10.4  -5.55664   CCACCATGAAAAAAA              GGACCC GCGC GGGTCC               TTTTTCATTTGTGTG 100 50
         fur 4790593 .. 4790613 - -15.5   -5.7946   CCGGGAATAAAAAAA            GCCCCTTCT TGG AGAAGGGGC            TTTTGCTTTCACTGA 100 84
        hrcA 4786785 .. 4786810 -  -3.1  -2.82325   AGAAACACAAAAACT         CCCCTTCCTCC GCCA GGAGGATGTCG          GTTCGGGTGGGACTA  41 38
 IUJ48_21855 NONE
 IUJ48_21850 4785253 .. 4785309 -  -6.6  -4.40963   ATCCTCCAAAAAGAA TGGCTTTCGCAGACATG-AATGGGGGC CAAT ACCCCTATTTCAAGCCCGGGAAAGCAA ATATTCCCCGTCGCG  75 156
        grpE NONE
 IUJ48_21840 4784234 .. 4784249 -  -5.4  -3.48276   CCTGTCCCCACATAA              CTG-GGG CTG CCCGCAG              GGTTTTTCAAGACGC  53 32
        dnaK 4782187 .. 4782225 - -15.3     -2.89   AGTGCTACAGAATGA  GTTCGCCCGGTAGGCGGA TTTC TCCGGCTACCGGGCGG-C   AGAGGCAGGTCAGCG  77 49
        dnaJ 4780936 .. 4780973 - -23.5   -3.9941   CCTGCCACAATGAAA   GCGGCCCAGGGTCCGGA TACC TCCAGACCCTGGGCCGT    GGTCCGCCGCAATGG 100 61
 IUJ48_21815 4776220 .. 4776240 - -12.5  -2.60496   GTTCCTCCGAAAGAT            GCGCCGGCA GGA TGCCGGCGG            CGAAGGCGCGAACAG  64 296
 IUJ48_21810 4775771 .. 4775786 - -11.8  -5.94713   ATGGGACAAAAAAAA              CCGGCG ATGG CGCCGG               TTCAGTGACGGTACT 100 58
 IUJ48_21805 4775129 .. 4775152 - -10.9  -2.52464   GTGCTGTCGAAGTGA          CGCGCCGCC GCGCCT GGCGGCGCC           GTCCCCGTGGCTCGC  61 42
 IUJ48_21790 NONE
 IUJ48_21785 4772093 .. 4772110 - -12.7   -4.8622   CCGCCCAACGAAAAA             CCCTCGG CATG CCGAGGG              TTTTTTCACTTTCGC 100 57
         icd 4770130 .. 4770153 - -13.8  -5.75342   CGCGCCCAAAAAAAA          CCCGCAGGCC TCGC GGCATGCGGG           TTTTTGGGGCGAAGC 100 57
 IUJ48_21770 NONE
 IUJ48_21765 4767519 .. 4767539 -    -9  -6.34424   CGCGCAAAAAAAAAA            GCAAGGCC ATACA AGCCTTGC            TTTTCATGCGGACAA 100 68
 IUJ48_21760 4765750 .. 4765792 -  -7.5  -2.52896   CCAGCCGCGAACTGA CGCCACGCCTGCAACGCGC GATGA GCGTGGTGCAGGGGTCGCC TAGTAGGCTGCAGAC  50 25
 IUJ48_21710 NONE
 IUJ48_21705 4751672 .. 4751684 -  -4.7  -2.70298   GTGCTCAAGGACAAG                GCCCG CAC CTGGC                TGGTGCAGAAGAACG  43 520
 IUJ48_21685 NONE
        lolA 4746775 .. 4746792 - -14.1  -5.09895   CACGTATGCAAAAAA             CGGCCGC CCGC GCGGCCG              TTTTTTGCGGGCAAC 100 336
 IUJ48_21630 4735801 .. 4735846 -  -9.5  -2.57243   CCAGTATTACAACAT GTCCGGCCGCCCTCCGCCCTGG CGG CCAGGCCGGGAACCGGCCTG-C GGCGCCAGGCCCGGC  55 63
 IUJ48_21625 4734396 .. 4734408 - -10.5  -3.34013   GATTGCGGGAAGCAA                CGGGC GGC GCCCG                TTACCGTTTCTTGGC  67 26
        serS 4732972 .. 4732989 - -12.7  -5.64873   GCGAACAATAAAAAA             CGGAGCC CGCG GGCTCCG              TTTTTTATTTGCGGA 100 56
 IUJ48_21615 4732260 .. 4732279 - -13.6  -4.91852   GGCACGAAAAACAAA            GGCCACTC CCAG GAGTGGCC             TTTTTTCCTGCGGGG 100 217
 IUJ48_21600 4730581 .. 4730593 -  -3.4  -3.61894   AACGTCGTTTAACAA                CATG TCGGT CATG                GGGACGTCCTTGGCC  51 85
 IUJ48_21595 NONE
 IUJ48_21585 NONE
 IUJ48_21580 4726257 .. 4726282 -  -3.1  -3.05816   CCATCGGCCACTCAA         GGTGGCCG-GCC GAT GACGCGGCGTCC         TGCGATGCGGCTCAG  43 37
 IUJ48_21575 4725124 .. 4725162 -  -9.4  -2.52896   CGATGCCGCAATGGA   CCAGCCTGGCCATGGGCG CGC CGCGCACGGTCATGCTGT   CGGCAACCGTGGATT  55 61
 IUJ48_21535 4714750 .. 4714792 -   -12  -4.88407   GCAGGCAAGCAAAAA CACAGACGACCCGCACAAGC CCC GCTTGTGCGGGTTTTTTGTT GCCCGGGTGTGTCGG 100 83
 IUJ48_21525 4712991 .. 4713002 -  -7.2  -3.01791   ACGGCGGCCGGAACA                CGCC GGCC GGCG                 CCGTGGGCGAAACAC  50 114
 IUJ48_21520 NONE
        yaaA 4711330 .. 4711348 - -13.1  -6.17268   CGAGAACAAAAAAAA             CCGGCCC TTTCG GGGCCGG             TTTTCCGCGCTACCC 100 50
 IUJ48_21505 NONE
        ilvN NONE
        ilvC 4705202 .. 4705226 - -13.6  -5.27335   CCGCGCAAAGAAAAA          CGGCATGCCC TCGCG AGGCATGCCG          CTTGCCGTCGGCGCG 100 73
        pssA 4704221 .. 4704240 - -10.7  -5.14563   TCCCCCATGAAAAAA            CCCGCCT TCATCC AGGCGGG             TTTTTCTTTTGCCGG 100 50
        rpsO 4703034 .. 4703069 -   -19  -5.04601   CTTACAAATGAAAAA    CCGTGGCCGTCGCGAC ATGC GTCGCACCGACCACGG     TTGCGTCATGGGGAG 100 54
         pnp 4700808 .. 4700825 - -14.1  -5.41941   CAAAGCAAAGAAAAA             CGGCGCC TCGC GGCGCCG              TTCTTGAGCAGGGGA 100 51
 IUJ48_21470 4699885 .. 4699898 -  -3.1  -3.05384   GCGGTCTGGATGGAA               GCGAT ATCG ATCAC                GGTGGAAAAATCCTG  43 41
 IUJ48_21465 4698643 .. 4698662 -  -5.6  -4.57569   GTACCGGCTGAAAAA            CCAGGTGG GCCG CGACCCGG             AACTGGGCCGCCCCT  76 44
 IUJ48_21450 4695607 .. 4695626 - -11.4  -2.71731   GTCACCGGTCAATCA            CCG-GGCGC CAG GCGCCGCGG            CCCAACCGTAGCCCT  62 3
 IUJ48_21440 4693274 .. 4693322 -  -3.7  -2.85999   GGATGGCACATGATA CCGTCGCCGCAT-TCG-CGCGCC CGGCC GGCGCGGCCTCATACCGCGCCGG CCTCAGGCGGCGCAG  43 44
 IUJ48_21435 4691782 .. 4691792 -  -2.4  -4.07885   CACCGGTCTTGAAAA                 CCGG CAA CGGG                 CAACCGTTCGTGAGT  58 203
 IUJ48_21425 4690550 .. 4690606 -  -3.6  -4.08692   GAACCCGGGGGAAAA GCACCCGCCCACGGGCT-GGCCTGGAA ATAA TTCCAGGCGAAACCCGTGATTGTATCC TGTTGCGCGGCGCCG  60 61
 IUJ48_21420 4689752 .. 4689764 -  -5.5  -2.95223   CAAGGGCATTACAGA                CTCCG GAA CGGAA                ACTTAGATGGCGGCG  48 28
        secG 4689205 .. 4689222 - -14.1  -5.14563   GCCGCCATGAAAAAA             GGCCGGC TATC GCCGGCC              TTTCTCATGCTGTCC 100 45
 IUJ48_21405 4688493 .. 4688521 - -16.2  -4.81359   AACGCAAAGACAAAA        GGCCTGTAAGAA TCCAG TTCTTACAGGCC        TTTGCTGTCCGGATG 100 63
 IUJ48_21400 NONE
 IUJ48_21395 NONE
 IUJ48_21390 NONE
 IUJ48_21385 4681827 .. 4681849 - -16.3  -6.07627   AGCCGCAAAAAAAAA           GGCCGGCAC GCGAG GTGCCGGCC           AGTCACGATCGCTTT 100 87
 IUJ48_21375 4679500 .. 4679525 -  -6.1  -3.05596   CAGTTTTGTAGCGAA         TGCCGCCCG-GT CTC ACGCCGGCAGCA         ATCGCGCATTGCCCG  49 12
 IUJ48_21370 4678697 .. 4678726 - -13.5  -5.30616   TCAGCCAAAGAAAAA       CCCGCAGGTCCCG GAAT CGGGATGTGCGGG        TTTCGAGAGGGGCGG 100 71
 IUJ48_21365 4677418 .. 4677458 -  -8.9  -2.52464   GCGTGTTCGAATCGA CGCC-CGGCGCCGCGCCGC GCCTG GTGGCGCG-CACCGAGGCC CCGGTGACGGAACCG  51 503
 IUJ48_21350 4669683 .. 4669700 -  -5.5  -3.05384   TGCCGCCTGACTGAA             CGCAGGC TGAC ACCTGCA              AGCATCTCCGCCCGC  49 208
 IUJ48_21345 4668647 .. 4668682 -  -7.6  -2.62933   GAAGCTTCCAGATCA   CGTTCTGCC-GCGCGG ATGGGG CCTCGCCGGCAG-ACG    CCGAACGTTCGGCGT  50 91
 IUJ48_21330 4666073 .. 4666094 -    -5  -4.56597   CCCTGGCGCGAAAAA           CGCGGGCC GCTCAT GGCCCGTA            GAAGCCGACCGGCGG  74 14
 IUJ48_21325 NONE
 IUJ48_21320 4664554 .. 4664577 -  -3.8  -3.05194   AAGGAAACAAAAGAG          CGTTCA-TGGC GGA GCCGGCGAACG          GGGAAATCGGAAAGA  45 64
 IUJ48_21315 NONE
 IUJ48_21310 4661884 .. 4661897 -  -6.7  -3.19642   ATCATTATTGATGAA               GGCAT TCAA ATGCC                CTTCCCATTACGGCC  54 57
 IUJ48_21305 NONE
 IUJ48_21300 NONE
 IUJ48_21295 4657766 .. 4657782 -  -5.7  -4.18018   GGGCCCCACCCAAAA              CCGCCAG TTG CCGGCCG              CGCCGACCGGCGCGG  66 42
 IUJ48_21290 4656250 .. 4656272 - -11.3  -3.09327   CGAGTCGACCGAACA           CGCGCTCGA CAAGC TCGAACGCG           GCGAAATCACGCTGG  62 402
 IUJ48_21270 4651567 .. 4651606 -  -7.7  -4.15044   TCTCCTTTCAAGAAA  CGTGGGAAGGCGCCGCCG TCAGG CGACGGCGCCGACC-AGG  GGGAACAGACCGAAC  71 4
 IUJ48_21265 4650299 .. 4650315 - -11.5  -3.61715   CATCGCCTTCAACAA              CGCCGGC ATG ACCGGCG              ACGCCCTGCCCCTGC  71 515
 IUJ48_21255 4648552 .. 4648563 -  -2.2  -3.43785   GACCACAGCAACTAA                GCTG CCAG CAAC                 AGGTTGAGGAGGACT  47 508
        galU 4647363 .. 4647377 -  -5.7  -4.24342   CGCGCCAGCAAGAAA               CATGC CCCTT GCATG               GCTGACGCCGCCGCA  70 69
 IUJ48_21240 4645767 .. 4645783 -  -7.9  -3.18264   GTCTCCATGGATGAA              GCGTGCG CGC CGGACGC              ACTAATGCGCGGCCA  57 27
 IUJ48_21235 4644564 .. 4644582 -  -4.5   -3.6715   GGAGGGAATGGGAAA             CGCCG ATTTTGGCA CGGCG             CGGCATGGCCGCATG  53 60
 IUJ48_21230 4644138 .. 4644182 -  -7.6  -3.33737   CAGCAACCTGCACAA GCTGGCGCGCCGTCTCGGCC TGAAG GACTGAGCCTGCTAGCCAGC TAGGAGCGCGGCATG  58 25
        ytfE 4641722 .. 4641772 -  -3.8   -3.5627   ACAGGACCGCTGAAA CCGCCGGGCCCAC-GCGCCGCGCA TCCGT CGC-CGCCACGGCGGGCCAGGGAG CCGGCGCGCATGTGT  53 70
 IUJ48_21210 4640030 .. 4640042 - -10.5   -3.7829   ACCAGACCGAGGAAA                GCGCC AAC GGCGC                CTACGGCGACATCCC  71 319
 IUJ48_21200 4637313 .. 4637331 -  -3.1  -3.59202   GAGGGGCACAGACAA             GAGCG GCGATTTTG CGCTC             TGGTAGGGACGGTCG  51 60
 IUJ48_21195 4635845 .. 4635878 -  -5.1  -2.51888   CGCGAAACGCAACAT     GGCCCTCTCCTATCG CGGC CGACAGGCGCAGGCG      CGCCGGCCGCCGGTC  43 53
 IUJ48_21190 NONE
 IUJ48_21185 NONE
 IUJ48_21180 4632368 .. 4632382 -  -4.2  -2.86564   GAATCTAATCCAAAC               CGCGTA TTT TATGCG               TAAGTCCGCGCCGCA  43 73
 IUJ48_21175 4631663 .. 4631703 -   -19   -3.5394   AAAGCGGCCCGGAAA CGAGCGCGGCGGCC-TCCT TTGC AGGAAGGCCGCCGCGCGTG  CCGGGCGCTGTCGGG 100 41
 IUJ48_21170 4629747 .. 4629790 -  -7.5  -5.52384   CCCCGAGCAAAAAAA CCGCCCCGG---CAACCGTCAA GCT TCAACGGTGGAGTCCGGGGCGG CGTTGGCCTGGCGTG 100 212
 IUJ48_21140 4619782 .. 4619810 -  -6.5  -3.31792   CGAGCACCGTGACAA        TGCCCGCGATGCC GCG GTCGCCGCGGCCA        TGGCCCGATTGCCCG  55 68
        betT 4617634 .. 4617653 - -16.4  -5.51165   AAAAGCGTAAAAAAA            CCGCCGGC AACG GCCGGCGG             TCTGCGGGAAAAGGA 100 76
 IUJ48_21130 NONE
        mexI NONE
 IUJ48_21120 4611791 .. 4611812 -  -5.1   -3.6707   ATGGAAGATCGGAAA           GGCGCCA-AG CCC CTATGGTGCC           ACGGATTGCGCCTCC  55 16
 IUJ48_21115 4611015 .. 4611039 -  -7.8  -3.25341   ATCGGAACAGGAATA         CATCCGGCTGC AGCA GC-GCCGGCTG          GTCAATGCGGTGGAC  55 101
        axyZ NONE
 IUJ48_21090 4603466 .. 4603490 - -12.7  -2.89564   CGGCGATTGTATAGA          GCGGCGGCCGC CAG GCGCCCGCCCC          TGGTCCCGGACGACC  69 69
 IUJ48_21085 4601763 .. 4601784 - -13.7   -4.9755   AGAGACAAGTAAAAA           CGGGACCCG CAAC CGGATCCCG            TGTCTGGCTCGATGC 100 40
 IUJ48_21080 4599856 .. 4599909 -   -21  -2.72511   CCCATGGCGGCAAAT CGCCGCAAC-CGTGCCGGCGCGCGCC GGGC GG-GCGCGCCGGCACGAGGCTCAGCG GCCGACCGCGTAGGC 100 20
 IUJ48_21075 NONE
 IUJ48_21070 NONE
 IUJ48_21065 4597038 .. 4597065 -  -7.6  -2.62983   CCGAGTCGGACACCA        TCGTGCTGGCGC TGCC GCGCGAACGCGA         GATCGACCGCACCCT  48 216
 IUJ48_21045 4594139 .. 4594156 - -12.7  -5.71712   TCGGACATAAAAAAA             GCCACCC CGGA GGGTGGC              TTCATATGAACGGGC 100 94
 IUJ48_21040 4593433 .. 4593447 -  -6.4  -3.72576   CGTGCGGTGATGAAA               TAACCC GGA GGGTCA               TTCCCAGTCCAGCGC  62 23
 IUJ48_21035 NONE
 IUJ48_21030 NONE
 IUJ48_21025 NONE
        nuoE NONE
        nuoF NONE
 IUJ48_21010 NONE
        nuoH NONE
        nuoI 4585104 .. 4585118 -  -4.2  -4.13282   AGGACAGTGGTAAAA               GTCATG GAT CAGGAC               CCTGGGCTCAACGGT  62 33
 IUJ48_20995 NONE
        nuoK NONE
        nuoL NONE
 IUJ48_20980 NONE
        nuoN NONE
 IUJ48_20970 4578709 .. 4578736 - -21.4  -3.35679   CGCTGGCACGCATAA        GCCAAACGCCCC TTGC GGGGCGTTTGGC         AGGTACTGCGAAGGC 100 53
 IUJ48_20965 4576279 .. 4576293 -  -7.1  -5.40072   CTGCCTTCAAAAAAA               CCACC GCGAA GGTGG               TTTTTTGAAGGGTCC 100 44
 IUJ48_20960 4573345 .. 4573368 -  -2.2   -4.2349   GGTCTACACCGAAAA          GCTGCGCCTG AACC CGGGTGCAGA           ACGCCTGATCACCAC  61 427
 IUJ48_20945 NONE
 IUJ48_20940 4568154 .. 4568175 - -15.9  -5.08824   CGCGCACCGAAAAAA           TGGCGCGGT AAAC ACCGCGCCA            TCGATGCAAGCGGGG 100 54
 IUJ48_20935 4565780 .. 4565803 - -18.2   -4.8622   GCGGGCAATGAAAAA          GCCCGCCTGT TCGC ACAGGCGGGC           TTTCTTTATTTGCCG 100 68
        tsaB NONE
 IUJ48_20905 NONE
         smc 4554783 .. 4554795 -  -5.5  -3.57792   TCACTCATGTGTAAA                TCCCG CGC CAGGA                AGCCGGCGCCATTCT  57 52
 IUJ48_20890 4553720 .. 4553732 -  -6.9  -3.68351   TGCTCATTATGCAAA                CACCC GCT GGGCG                CGCTCGCTGCCGGCC  59 4
        ligA 4551533 .. 4551572 - -17.2  -4.08216   CGAGCGTGGCGAAAA  TGGAAACAGGCCGCGCGCC AAG GGCGGGCGGCCTGTT-CGA  CAGGGCCAGGCGCCG 100 65
 IUJ48_20860 NONE
 IUJ48_20855 NONE
 IUJ48_20850 NONE
 IUJ48_20845 4545869 .. 4545893 -   -15  -2.66787   GGAACACTGATACGA          CACACCGGCC GGAGA GGCCGGTGCG          AAGCATTGCTCGGGC  75 80
 IUJ48_20840 NONE
 IUJ48_20835 NONE
 IUJ48_20830 4541885 .. 4541907 -  -7.7  -2.89447   TTTCAACGAGAAGGA          GCCGGTGCCCG AGC CGGGC-C-GGC          GCGACGTGGTGCTGG  50 290
        pncB NONE
 IUJ48_20750 4526610 .. 4526631 - -17.3  -6.09196   CGCAAAACAAAAAAA           GCCCTCCGG CCTG CCGGAGGGC            TTTTCATCGCGCGGA 100 49
 IUJ48_20735 4522519 .. 4522536 -  -9.1  -3.13403   CCTGGCTGATCAAGA             CCACGGG TTCT CCCATGG              CGCCGGCCTACTACG  56 238
        argE NONE
        trpB NONE
 IUJ48_20715 4517794 .. 4517825 -  -2.1  -2.71731   TTCATCCCGTAAGGA      GGTCGCGCCGGGCC GTTCA GGCC-GACACGCTC      GGTCGTTTCACTTGA  38 10
 IUJ48_20710 4516846 .. 4516873 - -18.4  -4.72986   CATGTGGATGAAAAA        CGCCGCCGGCAC GGTC GTGGCGGCGGCG         TCTGGGTGCGGGCAG 100 46
 IUJ48_20705 4516054 .. 4516069 - -10.4  -5.76949   GAGGCCGAAAAAAAA              CCCTCG TCAC CGAGGG               CTTTTCATCAGGCCG 100 54
 IUJ48_20695 NONE
 IUJ48_20690 4510651 .. 4510673 - -10.4  -2.79796   CGCGACCCCATGATA           TTCCGCCGGC GTA GCCGGCGGCG           ATCGGTAATAGACCG  60 86
        msrP NONE
        msrQ 4508925 .. 4508970 -  -7.4  -3.57144   GCGGTGACCGCGAAA GACACGGCACGCCCGACGAGA TGGGT TCACCCCGGGCG-GCGGCGCC ACCAGGCGACCAGCC  63 6
 IUJ48_20660 4505965 .. 4505992 - -11.2  -3.88291   GATGACTCCTAGAAA        CGGGGCGCATTG TACG CGATGCGGCCCG         ATGTTGATCTCAATC  79 35
        rpmF 4505738 .. 4505759 -  -2.9  -2.75844   GCGCTCAGCCGAAAT           GGTCCGA GTACGAGT TCGGCCC            GGGGGCCTTATTCGT  40 33
        plsX 4504644 .. 4504660 -  -4.4  -3.18264   TGCGGTATCCATCAA             GCGG-TG TCCC CAGCCGC              GCCCGGTTCGAGCGC  47 5
 IUJ48_20645 NONE
        fabD NONE
        fabG 4501826 .. 4501852 -  -7.2  -3.53012   GCCCCGCGCCGGAAA        GCCC-GGCTGC GGCGCG GCGGCCTGGGC         CGCCCACGCGCTTCG  57 45
        acpP 4501296 .. 4501323 -  -9.7  -3.12327   GCGGCACACGCAACA        GCGGGTCGGGC GTCAAT GCCCTTCCCGC         GCGTGGACCACACGG  60 118
        fabF NONE
 IUJ48_20620 NONE
        rpoE NONE
 IUJ48_20610 4498377 .. 4498391 -  -4.2  -3.50853   GGGTCGGAAGCACAA               GGGC CATCAGC GCCC               CGCTCCGACATCGAA  51 17
 IUJ48_20605 NONE
 IUJ48_20600 4495717 .. 4495741 - -17.1  -4.59773   CGGCACGGGCAAAAA          CGAGGGGGCGC CAG GCGCCCCCTCT          TGCGGCAACCAGCCA 100 60
        lepA NONE
        lepB 4492852 .. 4492862 -  -3.2   -2.7094   GGCTAGCGACATAAT                 CAGT TGA ACCG                 GCCGATGCGGCTGAG  40 14
         rnc NONE
         era NONE
        recO NONE
 IUJ48_20570 4489153 .. 4489187 -  -4.1   -2.8372   CATTGCCCAGGAAAT     CCTCGATGCCTGCGG CCTGC CCACCGATATCGTGG     TGCCGACCGCGCGCG  42 521
        lptF 4479537 .. 4479551 -  -7.8  -3.48024   CGGCACCATGAAATA               CCTGCC CTG AGCAGG               CCTGGCAATCCGGGA  60 121
 IUJ48_20510 4477157 .. 4477173 -  -2.2  -3.29144   TGATGCTCCTCACAA              CTGCAT AGTCG ATGCGG              ATGGAATCCGCGTTC  44 89
 IUJ48_20505 4475593 .. 4475641 - -11.2  -3.87584   AATTATAAGTAATAA GGACGCCTTGTTATATGACTTAT TTAT ATAAG-CTTAGGACAAGGCGTCC CTGTTTCAGCGCATC  79 31
 IUJ48_20500 4474550 .. 4474571 - -12.9  -5.75342   CGCGGGCAAAAAAAA           CGGCTCCCC GGAA GGGGCGCCG            CCTTTCGTCCGACTG 100 63
 IUJ48_20495 4473915 .. 4473943 - -20.3  -4.16943   CTCCATACGGCAAAA        CGCCGCCGGACCA TTC CAGTCCGGCGGCG        TTTTACATTCCTCTT 100 123
 IUJ48_20485 NONE
 IUJ48_20480 NONE
 IUJ48_20475 4469161 .. 4469208 - -25.6  -3.20236   CAACGCAATACGCAA CCCGCCGGATGCCGCCGCGCCGC GAG GCGCCGCGGCGGCATCCGG-GAC TTCATAAGAATATCA 100 63
         acs 4466896 .. 4466934 - -18.3  -5.15969   CTTGAATGGAAAAAA  CGACGATGCCCATGCCGG CAAA CCGGCATGGGCACC-TCA   CATTATGCTCCCGTC 100 90
 IUJ48_20465 4465951 .. 4465966 -  -8.2   -3.5774   ACGGAATCCGGTAAA              CGGGCC GGTC AGCCCG               CGCGCGCGGCGGGCG  65 18
        ltaE 4464474 .. 4464522 -  -6.7  -3.50447   GCAAGGCCCAGACAA CGCCATCGAACTGGCCCATG GCTACACCTA CTCGGGCCA-TCCGGTGGCG TGCGCGGCCGCCCTG  55 409
 IUJ48_20425 4457754 .. 4457778 -  -2.1  -3.53811   GGCATGGCCGGCAAA         TGCGGGCGCC GTTTCA AACG-CCGCA          TTGAAGTCGGACTGC  47 56
 IUJ48_20420 NONE
 IUJ48_20415 4456106 .. 4456121 -  -7.5  -4.98531   GTCCCAAATGAAAAA              CGCCC TTTGCG GGGCG               TTATTCATGATGCCT  95 51
 IUJ48_20405 NONE
 IUJ48_20400 NONE
 IUJ48_20395 NONE
        gsiB 4449942 .. 4449968 - -15.8  -3.03635   GAAATTCCTGCAACA         TCGGCGGGGACA CCG CGTCCCCGCCGT         ATGTGGCCTTGCAAG  81 75
        gsiC NONE
        gsiD 4447966 .. 4448024 - -16.1  -2.50778   CCAGAATGCAAAATG CCGCCGTCCCGCGCGACCGTGGCGCGCGCC GCGA GGCGGGCGCC-CGG--ACGCGGG-CGGCG- GCAAGGGGATCAATG  77 96
 IUJ48_20375 NONE
 IUJ48_20370 NONE
 IUJ48_20365 4444155 .. 4444168 -  -9.5  -4.66609   CATGCCATGGAAAAA               GGCCC CGAG GGGCC                TTTTTCCATGGTCGG  88 50
 IUJ48_20355 4441214 .. 4441260 - -28.7  -3.62046   CGACGGCGGGAACAA GGCCGGCGGC-CCGGGCGGCGC AGAT GCGCGGCTCGGTGCCGCCGGCC TGCATTACGCCCCCT 100 30
 IUJ48_20350 NONE
         eno 4439431 .. 4439454 -   -21  -3.01712   GTCGTGGCGCTAACA          GGGCCGCGGC GCGT GCCGCGGCCC           GCTTACGTTAACGCA 100 33
        ftsB 4438785 .. 4438807 - -14.8  -4.07568   GGGCCTGGCGGAAAA           CGACGGCAGC TAC GCCGCCGCCG           CGCGCGCGCGAGGCC  95 184
 IUJ48_20260 NONE
        sdhC NONE
        sdhD NONE
 IUJ48_20245 4419402 .. 4419416 -    -7   -2.6063   CGGACTTAGAAGGTA               CGCGCC TTG GGCGGG               AAGGACTCGACCGTC  47 1
 IUJ48_20240 4418654 .. 4418680 -  -3.6  -3.97308   CTTAAATACACCAAA         CTACTAGACCGT GCG ACGGACCATCAG         TTCCTTGATCTTGCC  58 2
 IUJ48_20235 4418371 .. 4418387 -    -3  -2.60075   TTCCTCTCAATTAAT             CAGA-GC GACC GCATCTG              GCCGATGATGCCGCG  39 8
 IUJ48_20230 4417001 .. 4417014 -  -9.5   -5.4833   CCAGGCAACAAAAAA               CCGCC CGAA GGCGG                TTTTTTGTTCACGCG 100 51
 IUJ48_20225 4415654 .. 4415709 -  -5.9  -3.53012   CTGCGCTGGGCCAAA CAGGCGCGCCAG--CAGCCCGCCTTCG TGCC CGACGCCGCGCAGATCAAGCGCGCCCG CCGCTGGGTGATGAT  55 145
 IUJ48_20205 4407552 .. 4407575 - -16.8  -5.14563   GCCGGCATGAAAAAA          GGGCATGACG CGCG CGTCATGCCC           TTTCTGTCCTTGCCT 100 56
 IUJ48_20180 4401698 .. 4401712 - -11.4   -4.8622   TCCGCCAACGAAAAA               TGCCGC ATT GCGGCA               TTTTTTTCGGCATCC 100 67
 IUJ48_20175 4398503 .. 4398524 -  -2.3  -3.95073   CGCGACACGGACAAA           GTTC-GAAAC CAG GTTTCTGCAC           CTTGCCGCGCGCCGC  57 58
        odhB 4397131 .. 4397187 - -20.8  -3.67296   GAGGAGGGAGTGAAA CTCGCCCCGGC-CCGCGCTGGCCGGCCC CTG GGGCCGGCC-GGGCGCCGCCGACACGAG GGTCGCGCGGACGCC 100 59
        lpdA 4395624 .. 4395645 - -13.7  -6.09196   GGCAAAAGAAAAAAA           GGGCGGGTC CGAA AACCCGCCC            CCTTTGGCAGAGCCG 100 53
 IUJ48_20160 NONE
 IUJ48_20155 NONE
 IUJ48_20150 4392899 .. 4392921 -  -3.2  -2.52464   CCTCTCGGCAATGTA           GGACTCAGGC GCC GCGCGGGCCC           ACATGCAGCCAGAAC  39 7
 IUJ48_20145 4390299 .. 4390315 -  -5.8  -3.06312   AAACCTCTGATGGAA             CGAGCGG GGCT CCGC-CG              CAGGCAGACCGACAC  49 44
 IUJ48_20140 NONE
 IUJ48_20135 NONE
 IUJ48_20130 NONE
 IUJ48_20125 4387135 .. 4387191 - -10.1  -2.70932   GGGGCGCCTGAATGA CCGGCGCCGCCCGGGCGCGACGCCGCCCC TGC GCGGCGG-GT-GCGCGCGCG-GACGC-GG ACACCAGGCCGACGG  59 46
 IUJ48_20120 4385669 .. 4385702 - -28.3  -3.96148   GTTTCGGATTACAAA     CGACAAGGGCGGCGC AATC GCGCCGCCCTTGTCG      TTGCGCTCGCGGCGT 100 40
 IUJ48_20105 4380082 .. 4380103 - -14.5  -4.62069   GCCGCATGGGAAAAA           GCCCTTCGA TTCG TCGAAGGGC            TTTTTTTTGGGTCCG 100 59
 IUJ48_20095 4378153 .. 4378165 -  -3.3  -2.72379   GCAAGCCTTCAATCA                CGCGT TCC ATGCG                ATCGCTTCCTGGACC  40 10
        pgeF 4377352 .. 4377367 -  -8.2  -2.75064   GCGGGTATTCAATGA              GGCAGC CAGG GCCGCC               CGCCCGCGCGTGCGG  53 56
        phaC NONE
 IUJ48_20080 4374795 .. 4374815 - -16.1  -3.53224   CACCGCGGCGCGAAA            GGGCCGCCC GCC GGGCGACCC            GCGATGCGTCAGCCC  90 34
        phaR 4374065 .. 4374086 - -13.7  -5.18643   TCAAGCAAAACAAAA           CCGGCG-GGC AAC GCCACGCCGG           CCGGTCGACAGTCGG 100 73
 IUJ48_20070 4373358 .. 4373378 -  -4.5  -2.79501   CAGATGCGGAGCAGA            GGGCGCGCG ATT CGCACGATC            AGTAGCCGCCCTTCT  43 24
 IUJ48_20065 NONE
 IUJ48_20060 NONE
 IUJ48_20055 4370489 .. 4370502 -  -4.5   -4.1021   GGCGAGAACCAGAAA               CCCTG GCCC CAGGA                AAAACAACAGCTCAC  62 230
 IUJ48_20050 NONE
 IUJ48_20045 NONE
 IUJ48_20040 4357817 .. 4357837 -  -4.1  -4.05747   CACAGCCTAGATAAA            GATTTTCAC TTA ATAAAAATC            ATCATCCAACATCCC  60 251
 IUJ48_20035 4357380 .. 4357406 -  -3.5  -3.01791   ACGGGCCGGCCAAGA         GACGCTCCCAG TGCTG CCGGGTCCGCC         CTCACCCCGAATCAA  42 47
 IUJ48_20030 4356296 .. 4356325 - -21.5  -4.88407   CCATCCAATGAAAAA       CCGGCGCCTGTGC TCAC ACACAGGCGCCGG        TTTTTCATTGGGCGC 100 144
 IUJ48_20000 NONE
 IUJ48_19995 4346299 .. 4346313 -  -7.1  -3.57144   GGCTGCACTTCGAAA               CCTGC TATAT GCAGG               CCATCGCCTACTGCA  60 263
 IUJ48_19985 NONE
 IUJ48_19980 NONE
 IUJ48_19975 NONE
 IUJ48_19970 4341966 .. 4341979 -  -3.7  -3.07816   GCGCCAGCGATTGAA               GCCGC GGGC GCGTC                AGGGAAAGGCCCCTT  45 47
 IUJ48_19965 4340557 .. 4340590 - -14.5  -3.18582   TACCTGACCCAGGAA     CTCGC-GCGCGAACGC CTG GCGATCGCGCTGCGCG     CCGGCGCCTCGCTCG  77 427
 IUJ48_19905 4324395 .. 4324418 - -13.9  -3.59262   CGCCATAGCGCCAAA          TGGCCGACC TTTACG GGTCGGCCA           TTTTTTTTCGCATCA  84 42
        gyrA NONE
        serC NONE
        pheA NONE
 IUJ48_19860 NONE
 IUJ48_19855 NONE
        aroA 4311483 .. 4311498 -    -6  -4.43477   GTCATGTAAGGAAAA              TGGGCC GCGC GGCCCG               TGGTCGCTATGCCGA  73 32
 IUJ48_19845 4310647 .. 4310676 -  -7.1  -4.57341   AATGGCCGTTAAAAA       CACACCGCAGCGGA TTG CCCGCCACAGTG-G       AGTCAAAATACCTGC  79 132
        rpsA NONE
 IUJ48_19835 4308463 .. 4308484 - -10.9  -4.86385   ACGCCCAAAAACAAA           GCCCCTTGA TTTC TCAAGAGGC            GTTGCTCGCGGTCCG 100 74
 IUJ48_19830 4307963 .. 4307973 -  -4.6  -3.08581   ACCAAGGTTCAAAAT                 CCAC TGT GCGG                 GCTCTTGCGTAGATT  47 79
        lapB NONE
       rfaE1 NONE
        rfaD 4304759 .. 4304778 -   -10  -5.60689   GTAGACAAGAAAAAA            GCCGCC-TG TGG CACGGCGGC            TTTGTCATGCTCGAG 100 72
 IUJ48_19810 4303968 .. 4304024 -    -7  -4.07568   CGGGCGCCGCCAAAA GCCGCGCTCGTGCCAGGGGTTCACGCC ACGG GGCGCCC-CCCCTGCCCCAAGGCCGGC CAACGCGGGAAGGCC  68 86
        cysM 4302939 .. 4302975 - -25.2  -3.75332   ACCTCGCAACGCAAA    CGCCCCACGTCCCGGA CGGTT TCCGGGTCGTGGGGCG    TTTTTCCTCGGCGGA 100 64
 IUJ48_19790 4299892 .. 4299938 - -12.8  -2.78679   CCTGGCCAGCGAAAT CGAGGCGCGCGTCGGCCGCTG AAGGCG CGGCGCCCGCCGCGC-CCACG CCCGGCAGCCCCCGG  69 107
 IUJ48_19780 4297783 .. 4297798 -    -9  -3.05384   CCGGGGGGGAGTTAA              CGATCC GCCG GGATCG               CATTGCACAATTTTT  57 49
 IUJ48_19775 NONE
 IUJ48_19770 4296009 .. 4296033 - -21.5  -5.18726   GGCGGACAAGAAAAA          GCCCGCGGACA TAA TGTCCGCGGGC          CCGGGTATGAATATC 100 51
        aspT 4294151 .. 4294166 -  -3.3  -2.81133   GATTGACGGACGAGA              TTTCC TGCGGC GGAAA               CGGCCCCTAGGTCAT  41 32
 IUJ48_19760 NONE
        aspT NONE
 IUJ48_19750 4288488 .. 4288522 - -12.9  -4.56597   GGCCGGTTGGAAAAA    CGTTTCGG-CGGCGGC CGGT GCCGCCCTCCAAAACG     ATTCTTCCATCAAAC 100 74
 IUJ48_19745 4287682 .. 4287708 - -18.8  -4.66953   GCAAGACGTGAAAAA         GCCGCGCATTCC CAG GGAATACGCGGC         TTTGCGGGCGCTTTT 100 93
 IUJ48_19740 NONE
        cysT NONE
        cysW NONE
 IUJ48_19725 4283299 .. 4283313 -  -6.4  -2.57211   ACGCTTTCGTAGAAG               GCATAG GCG CCATGC               TCGGCCACGTGGCGT  47 333
 IUJ48_19715 4280421 .. 4280435 -  -2.1  -4.37527   TGACAAGCACCAAAA               GCCTT TCCGT AAGAC               AGCCCCACTTTACCG  65 178
 IUJ48_19710 4278915 .. 4278933 - -10.2  -3.73534   TAACGCGATCAAGAA             CCGCGGCA CGA CGCCACGG             CGGCAACCCGGGCAA  74 49
 IUJ48_19705 4277926 .. 4277943 -  -2.6  -2.52543   ATCTTCCGCAACCCA             CAGGCC TGGGTC GGCGTG              CGCTGGGGCATGGTG  37 517
        rplS 4276760 .. 4276777 -  -9.1  -5.61881   TTTCAAAAAGAAAAA             GGCACCC TCGC AGGTGCC              TTTTTAACCCGGAAA 100 110
 IUJ48_19690 4275846 .. 4275898 - -11.1  -3.28712   GTGCCGTTTCTACAA CTGCACCCATCGCCACGAGCCCG GTTGCGG CGTGGTCGCGGCGCTGGACGCGG GCGCGATCGACCCGG  66 134
         orn 4273105 .. 4273117 -  -3.3  -2.92293   AATGGGAAGACGACA                TGGCG GCT CGCGA                GCGGTTGCCGACGGT  42 52
 IUJ48_19670 4272387 .. 4272445 - -15.3  -3.44146   GGGCGCGACAACGAA CGCTACACGCCGCTGGCCGCCGACATCGC GGC GCGCT-TCGGCGGCCGGCCG-ACATAGCG CCCTGGGCCGAGGGG  86 59
        paaA 4270321 .. 4270349 -  -2.9  -2.72344   TTGGATGGGTAAGGA        GTTGGAAGGCCGG GCG CCGCCCGGCCAAG        GCTCAGGCCGCCTTG  40 28
        paaB NONE
        paaC NONE
        paaJ 4268689 .. 4268701 -  -4.1  -3.55444   GGCTCATTCTCGAAA                CCACT CTC AGTGA                GTCTTGAAGTAATCG  51 19
        paaK NONE
        paaN NONE
        paaB NONE
        paaI NONE
        paaF 4263116 .. 4263131 - -10.4  -6.06723   CGGCGCAAAAAAAAA              GCAGCC CGAG GGCTGC               TTTTTTCATGGCGGT 100 86
 IUJ48_19585 NONE
        ispH NONE
        maiA 4254166 .. 4254194 -  -5.8  -4.58395   TCCAGCGTCGAAAAA        GGCAGCGCGGCC GAAAA GGCCGGCCTGCA        GCCCGGTGACGTGGT  78 524
 IUJ48_19550 4250589 .. 4250614 - -19.1  -4.68645   CACGGAAAACCAAAA         GGGCCACTCAC TTGC GTGAGTGGCCC          TGAATTCTTTGGCTC 100 35
 IUJ48_19545 NONE
 IUJ48_19540 4247862 .. 4247873 -  -2.2  -3.62096   TTTCAGCACTTGAAA                TGGC AACC ACCA                 GACCATTTCAAGCCC  50 241
 IUJ48_19535 4246508 .. 4246525 -  -5.5  -4.66264   CAAAATCTGGAAAAA             GCTGGCC AACG AGCCAAC              AAGCCTGCGGGATGC  79 394
        scpB NONE
 IUJ48_19515 4242403 .. 4242422 -  -9.3  -5.83822   TATACTCAAAAAAAA            TGGGCTG CACGCC CAGCCCA             CCGTATTGCACAGTG 100 395
        rimP NONE
        nusA NONE
        infB 4237251 .. 4237281 -  -3.9  -2.61274   CTCATTGGAAGCAAT      GCCTCGCG-ACGCT TTAC AGCGTACGCGCGAT       TTCCTTGATTTCAAA  41 8
        rbfA 4236821 .. 4236834 -  -2.3  -4.06903   AATCCGGAAATTAAA               GCAGT GACG ACAGC                CCGATCAGGACTGGT  57 30
        truB NONE
        typA 4234162 .. 4234187 - -16.1  -5.30155   CCACGAATGAAAAAA         GCCGCGCACCC CGAA GGGTGTGCGGC          TTTCCGATTGCCAGG 100 68
 IUJ48_19475 4232263 .. 4232282 -  -9.2  -2.73875   CCCGCTGCAACAGGA            TGGCGCCG TCAT CGTCGCCA             CGCCCGGCCATCCGT  52 434
 IUJ48_19465 4230566 .. 4230606 - -11.7  -2.62184   TGGCGGTCTACAGGA  TCTGCGGGCGCCGGCCACG GTA CGTCGCCGGCGGTGGCAAA  ACGTCATTCGTCGAG  62 29
 IUJ48_19460 4229080 .. 4229108 - -23.1  -3.02263   AGACGCCCGGCAATA        CCGGGCGGCCGCG GAT CGCGGCCGCCCGC        CTGCGCCTACTTGCG 100 32
        polA 4225533 .. 4225570 - -12.1  -3.46709   AGAAAAGCGGAAATA   GGCCGC-CCAAGGAAG CCGTGCC CTTCCTTTGCGCGGCC   CGCGCTCCTCGCCCA  75 70
 IUJ48_19445 4224533 .. 4224559 -  -7.3  -3.39895   CCTGGTAGGAATCAA        GGCGGAGCCG ATGCCCCG CGG-TCCGCC         TTGCGGCATCCGCGA  58 91
 IUJ48_19440 4223669 .. 4223690 - -11.5  -5.75945   ACCCCCTAAAAAAAA           CCGCCACGC AAAC GCGCAGCGG            CTTCTCATGACGCCA 100 56
 IUJ48_19430 4219700 .. 4219721 - -14.5  -5.63103   CGGCAATGAAAAAAA           GCCCCTTGA GCGA TCAAGGGGC            TTTTTGTTTGGGGCG 100 49
 IUJ48_19420 NONE
 IUJ48_19415 4216746 .. 4216786 -  -7.4  -3.01712   GGCGGTCTGGTAAGA CCGCCACCCGCGCCGTCGG AATA CC-ACGGCGCGGTTTCAGG  CCCGGTTTGCGGCGG  54 56
 IUJ48_19400 NONE
 IUJ48_19395 4212201 .. 4212217 -    -5  -4.10159   AATATTCAAATCAAA              GGGCCG CGGGC CGGCGC              CAGGCCTGGCTGCGC  64 4
 IUJ48_19390 NONE
 IUJ48_19385 4210143 .. 4210182 -  -5.4   -2.9661   GAATGAGGCAGAAAG  GTTGCGCGGGAAGCGCCC GCCC GGGCGCCTGCCCTGCCGC   GGCGGCGTGGCCGCC  46 53
 IUJ48_19380 4208949 .. 4208968 -   -15  -4.27316   TCCGCCAACGCAAAA            GGGCTCGC GATC GCGAGCCC             TTTCTTTTTGCCGGG 100 49
 IUJ48_19360 4204175 .. 4204194 -  -6.4   -3.3382   TGTACGAGATACCAA            GGACACAT CCCG ATGCGCCC             GCGGTCTCAGGCGCA  55 32
 IUJ48_19355 NONE
 IUJ48_19350 NONE
         dxs 4200988 .. 4201006 -  -2.4  -3.78022   GCCACACGGACCAAA            CCACCGG GCCGGT CCG-TGG             GTGCGCGCAATCAGG  53 36
 IUJ48_19340 NONE
 IUJ48_19335 NONE
        rpsF NONE
        priB 4198095 .. 4198108 -  -9.5  -3.35996   TATCCGTATTCAGAA               GGCGC TCTC GCGCC                CGTTGCCCTTCCCGT  64 40
 IUJ48_19320 NONE
 IUJ48_19315 4197218 .. 4197266 - -19.9  -2.81072   GCGACGGAACACAAG CCGCAA-AGAAAAAAAGCCGGC GCGCGG GCCGGCTTTTTTTCTACCGCGG GGCGAGGCTTACGAC 100 34
 IUJ48_19310 NONE
 IUJ48_19305 4194867 .. 4194882 - -11.8  -5.14563   GCCCGCATGAAAAAA              CCGCGC CCGG GCGCGG               TTTTTTTTGGGGCCG 100 53
 IUJ48_19275 4190777 .. 4190789 -  -7.7  -5.13137   TAAACAAAGGAAAAA                GGCAT CCT ATGCC                AGCGCTATCCCAAGG 100 91
 IUJ48_19270 4190394 .. 4190408 -  -7.1  -4.36914   TGCCGTGTCAGAAAA               CCAGC TTGCC GCTGG               CGCGCATCACGTGGC  75 3
 IUJ48_19255 NONE
 IUJ48_19250 4187615 .. 4187632 -  -9.1  -6.17184   AGGACGAAAAAAAAA             CCGCGAC GCGT GTCACGG              TTTTTTCGCAGCGCT 100 91
 IUJ48_19245 4187013 .. 4187026 -  -9.5  -5.26875   GCCGGAATGAAAAAA               GCCCC GTAT GGGGC                ATTTTTTCATCGCCG 100 129
 IUJ48_19240 4185564 .. 4185580 -  -9.3  -2.71364   CCACGTGGTCAACGA              CCTGGCG CCG CGCCCGG              CGCAGAGCGCCGCGC  52 67
 IUJ48_19225 4184387 .. 4184423 - -10.2  -4.66609   CAGCGCACGCAAAAA   GGCCACGCCCGAAATGC CGCA ACATTCCTG-CGTGGCC    CTGGCCGCGCCGCGA  91 93
 IUJ48_19220 NONE
 IUJ48_19215 4183446 .. 4183470 -  -2.9  -2.53382   ATTATTCTCAACGCA          TGCGCAA GTCCAACATTT TTGCGCA          CACGGGTTTACCCTG  39 46
 IUJ48_19210 4182075 .. 4182085 -  -8.2  -2.82516   GCCGTCATGACCACA                 CCGC CGC GCGG                 CCCGCGGACGCCTTA  55 38
 IUJ48_19205 4180534 .. 4180553 - -12.8   -4.4261   GCCTCAAGATGAAAA            CGCCCCCC CTCG GGGGGGCA             ACTAGCCGGCGACGC  95 27
 IUJ48_19195 4179077 .. 4179095 - -13.1  -5.00616   CGCCGGCGCAAAAAA             GGCGGCC GCGAT GGCCGCC             TCCGGTTTTCCGGGG 100 49
        recA NONE
        recX 4172198 .. 4172230 -  -5.5  -4.49756   GGCGAAATAGGAAAA     GGCAACGACGGGCC GGCAAT GGCCC-TCGCCGCG      CGGCCTGCTCAGTCG  76 34
        metE 4168698 .. 4168732 -  -9.9  -5.53991   CAGGGACGAAAAAAA     CCCCTGTGGCGTGCA TCAGG CGCGCAACACAGGGG     TTCCGGGTTGCCGGC 100 75
 IUJ48_19155 4164594 .. 4164629 - -12.4  -2.53271   CGACCGTCAGAATAC    GCGTCGCGCTCGCCCCG GCG CCGGGCGTGC-CGGCGC    TTGCCGGCTCATTGG  64 34
 IUJ48_19150 NONE
        sucC NONE
        sucD 4161776 .. 4161793 - -14.1  -5.06816   AGCGGGCAAGAAAAA             GGCCCGC CGAA GCGGGCC              TTTTGGGTCAGGCTG 100 47
 IUJ48_19135 4160772 .. 4160790 - -13.1   -4.7261   ATTTATCAAAATAAA             GGCCGGC CCCGT GCCGGCC             AGCCCGCCGCGCGCC 100 89
 IUJ48_19130 4159920 .. 4159943 -  -3.8  -3.56704   GCGCCATCAAACGAA          GTTGGAGACGA TGA CCGTCGCCA-C          GACCCCGAGGATGGC  53 102
        hemC NONE
 IUJ48_19120 NONE
 IUJ48_19115 4156898 .. 4156911 -  -2.3  -3.30441   CAGCAGGGTCCAGAA               CCAGG TACG CATGG                GCCTAGTCCTGGTCG  45 28
 IUJ48_19110 4155296 .. 4155318 -  -3.5  -2.93891   AGTCTGAAAAGAGGA          TCAAAG-CGA ACCG TCGTCCTTGA           ACGGCGGCTTGGTGG  42 3
         ppa 4154645 .. 4154686 - -28.1  -3.65812   GGGCCTGCAAGACAA CGGCGCGGCGGCGATCGGCA TCA TGCCG-TCGCGGCCGCGCCG CCTGAAGACGCCCGC 100 75
 IUJ48_19080 NONE
 IUJ48_19075 NONE
 IUJ48_19070 NONE
 IUJ48_19065 NONE
 IUJ48_19060 NONE
 IUJ48_19055 NONE
 IUJ48_19050 4145771 .. 4145792 - -14.5  -5.27335   GTCTCCAAAGAAAAA           GCCCCTTGA GCGA TCAAGGGGC            TTTTTTATCACCGGG 100 50
        alaC 4141394 .. 4141421 -  -5.4  -5.10497   AAGCCACGCAAAAAA        CGGCTGC-CCCCG TAT CGGGATGCCGCGG        ATCCGGCTCCGCCGG  89 84
 IUJ48_19025 4139916 .. 4139943 - -12.6  -2.52464   CGTCCCGCCAAGCCA        GGCCGCGCGGAG CCGG CTCCGCCGGGCC         GCCGCCGGTGCCCCC  64 83
 IUJ48_19020 4138412 .. 4138438 - -14.5  -5.17576   TATGAACGTAAAAAA        CCCCTCG-CGGT TCAC ACCGGCGAGGGG         TTGCAACCCCATACA 100 55
 IUJ48_19015 4138045 .. 4138064 - -16.4  -4.54727   GCGGCCAAACGAAAA            GCCCCGGC CTGA GCCGGGGC             TTTTTTCATCCAGAT 100 53
 IUJ48_19000 4133431 .. 4133459 - -16.1   -5.1356   TTTCAGTAAGAAAAA        TAAAGGCGCACCA AAA TGGTGCGCCTTTT        TTATTTTCGAACAAC 100 60
        tldD 4130580 .. 4130599 -   -15    -5.626   GACGGCACAAAAAAA            GCCGCCAG TTCG CTGGCGGC             TTTTTTGGGGGGATT 100 204
        aroG 4129402 .. 4129417 - -11.8  -3.53012   TTGCTGCGCCGCAAA              CCGCCG CCCG CGGCGG               CTTGCGGCAATCCTG  75 43
 IUJ48_18980 4127880 .. 4127900 - -15.4  -5.86061   CTGGACGAAAAAAAA            CCGGCGGG TCGCC CCCGCCGG            CCTTCATCTGCGCCC 100 52
 IUJ48_18975 NONE
        glcE NONE
        glcF 4123318 .. 4123335 -  -4.7  -4.58283   GAACTGGCCGAAAAA             CTCACCG AACG CGGCGTG              ACGGTCAAGTACGCC  75 499
        gcvA NONE
        mnmA NONE
 IUJ48_18925 4115190 .. 4115209 - -10.6  -4.41494   CATCGTCAAGGAAAA            GCAGCGCC CCGA GGCGCAGC             GCAGCCCGGAATGGA  84 347
        purB 4113291 .. 4113313 - -20.6  -3.01074   TAAGTACAACAAGGA           TGCCGCGCGC CCG GCGCGCGGCA           AGGCGACTATACCGC 100 32
 IUJ48_18910 4112747 .. 4112764 - -12.7  -4.30014   CGCACCAATGGAAAA             GCCCCTC GGTC GAGGGGC              TTTTTACATGCGGCG  95 66
 IUJ48_18890 4109686 .. 4109725 -  -7.7  -2.98491   AATCGATATGACACA  GC-CCACCGGCGCGCGCC TTAGC GGCTCACGCCGCCAGCGC  GTAGCGCATCGCGCA  54 11
 IUJ48_18885 4108825 .. 4108863 - -14.4  -3.53811   GCCATTGCGCGGAAA   GCGGCGCGCGGCGGGC ATTCAGG GCTCGCCGGCCGCCGC   CCGCGACACCACCGC  81 5
 IUJ48_18880 4107422 .. 4107459 - -18.4  -3.95584   TCCTCATGAAGGAAA   TCCGCAGCACTGCCGG GTCAGG CCGGCGGCGCCGCGGA    GACAGGACGCCGGCC 100 130
 IUJ48_18875 4106773 .. 4106789 -  -3.6  -4.11484   CGTAAGCGCGGAAAA              GGCCGC TGCCG ACGACC              CGTCCAACCCCGTCT  63 410
 IUJ48_18860 4103874 .. 4103892 - -13.1  -5.24129   CCCTCTCATAAAAAA             GGCCCGC TGGTG GCGGGCC             TTTTTCGGTTCGTCG 100 83
 IUJ48_18855 NONE
 IUJ48_18850 NONE
 IUJ48_18845 NONE
 IUJ48_18840 NONE
 IUJ48_18835 NONE
 IUJ48_18830 NONE
 IUJ48_18825 NONE
 IUJ48_18820 NONE
 IUJ48_18815 NONE
 IUJ48_18810 NONE
 IUJ48_18805 NONE
 IUJ48_18800 NONE
 IUJ48_18795 4092550 .. 4092566 - -10.1   -2.6348   TGCAAATGCGAGAAC              GCTAGCG ACG CGCCAGC              CGCAGCAAGTCCAAA  58 201
 IUJ48_18790 4091526 .. 4091557 - -15.9  -3.30159   CGAACTGGCCCAGAA      GCTGGCGCGCAGCC AGCTA GGCCG-GCGCCAGC      TCGAGGAAATGCGGC  82 87
 IUJ48_18780 NONE
 IUJ48_18775 NONE
 IUJ48_18770 4088917 .. 4088944 - -17.8  -4.07568   GCCTCTCCTGGAAAA        GCCAA-CCGCGCC TCG GGCGCGGGTTGGC        GAAAAACCAGAAATC 100 255
 IUJ48_18765 4086873 .. 4086924 -  -7.1  -4.50358   AGCGAAACAGGAAAA CAGCCGCGGCGACATCGGCATGCC GGCAA GGAATGCCGGCG-CGCGGCGGATC AGTGCAACCACCGAC  79 355
        yddG 4085745 .. 4085759 -  -3.4  -3.70149   TTCAGACGATTCAAA               GCGCGG GGT CCGAAC               CCTGGCTGAAGATAT  55 145
 IUJ48_18745 4085117 .. 4085130 -  -8.1  -5.47218   GCGGACGCAAAAAAA               CCCTC GAAC GAGGG                TTTTGCGTGGGAGAG 100 62
 IUJ48_18740 4084837 .. 4084856 -  -2.7  -3.26596   TTGAAATGAATGGAA            TCCCGGC GCTCAG GCCAGGT             CGATCGTGCCGGGCG  44 15
 IUJ48_18735 4083610 .. 4083631 - -15.9  -3.58779   AAGAATTCAAAGCAA           GGCCCGCAA GCAA TTGCGGGCC            TTTTTGTTTTTGTGT  90 169
 IUJ48_18715 NONE
 IUJ48_18710 4078535 .. 4078547 -  -3.3   -3.8062   CAACTTCCACAAGAA                CACGC TGC ACGCG                TTGGCCGAACTGCTG  55 336
 IUJ48_18685 4073030 .. 4073053 -  -9.4  -5.06816   ATGCGCCAAGAAAAA          CCCCGTTCGC GAAA GCGTCCGGGG           TTTTTTCTTTTGCGG 100 98
 IUJ48_18675 4071907 .. 4071932 - -11.9  -4.33739   CAAAAAAGTTGAAAA         CCCCGGAAATC GTGA GATTTTCGGGG          TTTTTGCTTTGAGCT  95 191
         rnr 4068964 .. 4068996 - -14.7  -4.04474   ATACCTTTAGAGAAA      CGAATGCCCGCCCCG GAA CGGAGCGGGCCGCCG      GACAGGCCGGCCATA  95 103
        rlmB 4068192 .. 4068213 -  -2.8  -2.82521   TCTACGAAAAGGAAG           GCATGGCC GGCTCA GGCCTGGC            GCTGGCGCACGGTTT  41 15
 IUJ48_18655 4066849 .. 4066862 -  -3.1  -3.31144   CGGCGATCTGTATAA               GCATGG GTT CC-TGC               CCGGGTTGCGGCGCG  47 70
 IUJ48_18650 4066134 .. 4066169 - -10.4   -2.7264   AAATGCGTTCCAAAT    GCGCGTCGAGCGCGCCT CGA AGGCGC-CTCGAATCAC    GCTCAGACATCCACC  59 28
 IUJ48_18645 4065406 .. 4065435 -   -15  -3.69605   GGTACTCAAAAGCAA       TACGCGGGCCGG AGTATA CCGGACCGCGTA        CCTGTCGGCAAATCA  89 78
 IUJ48_18640 4065222 .. 4065244 - -11.3  -5.93252   CGCAAAAACAAAAAA          CCCGC-CACG GTAC CGTGTGCGGG           TTTCTGTTTCGGCTT 100 46
 IUJ48_18635 NONE
 IUJ48_18630 NONE
 IUJ48_18625 4062547 .. 4062567 - -15.4  -5.02074   CGATCCCGGAAAAAA            CGGGGCGC GAAAT GCGCCCCG            CTGCCGGGAATCGTT 100 40
 IUJ48_18620 NONE
 IUJ48_18615 NONE
 IUJ48_18610 4058400 .. 4058437 - -19.9  -3.55444   GCCCCACCGCCCAAA   TGCCAAAAGGTGGCCGC CCGC GCGGCCTCCTTTTGGCG    ACCCCGAAAGATCCT 100 306
 IUJ48_18595 NONE
 IUJ48_18590 NONE
 IUJ48_18585 NONE
 IUJ48_18580 NONE
 IUJ48_18575 4051835 .. 4051852 - -12.7  -5.00616   GCGCCCGTGAAAAAA             GCAGCCC CGTG GGGCTGC              TTTTTTTTTATCCGC 100 55
 IUJ48_18560 4049160 .. 4049184 - -20.1  -3.38581   AGCAAGCCTGAAAGA          CAAAGCGCCCG ATT CGGGCGCTTTG          TGGTTTCGGCAAGCC 100 40
 IUJ48_18540 NONE
 IUJ48_18535 NONE
 IUJ48_18530 NONE
 IUJ48_18525 NONE
        potA 4039988 .. 4040001 -  -3.7  -3.28712   GTCGCGGGGCGAGAA               GCGGC TCAT GACGC                CAGCACCGTCGCGCT  47 17
 IUJ48_18515 NONE
 IUJ48_18510 NONE
 IUJ48_18505 NONE
 IUJ48_18500 4037064 .. 4037113 -  -6.9  -3.76952   CGCATCCAACGCAAA TACGCCGAGATGCGGGCCGGC ATGGCCGA GCGCGCCCGCAAGGCGGCGCA ACAGGCGGGCACGGG  61 99
        rmuC 4034757 .. 4034780 -  -6.6  -3.28712   GCGCCCGGGTCACAA          GCTCGGC-CCC GGA GGGCGCCACGC          CGGGCCGCGGGGGGA  54 116
 IUJ48_18485 4033091 .. 4033137 -  -4.2  -3.14931   GGTATGGGTCACGAA CGACGGCATGC-TGGCTCCTC TTCGTT GATGCGCCGTGCTTGCCGGCG CGCCCCGCCCGGCGG  45 42
 IUJ48_18480 4031438 .. 4031456 -  -5.8  -2.64651   AAGCCGGGAAATTTA             GCATGCGG CCG CCGCCGGC             CAGGCCCGCGCCAGG  45 4
        rpiA 4030678 .. 4030712 - -17.1  -2.54192   GACAGGATTATGAAT    CGCGGCCGGACCGCCC GCAA GGGCGG-CCGGCCATG     CCCACTCAGGCGCGG  81 31
        phoU 4029677 .. 4029693 - -11.5  -4.74103   GCCCCAAGGCAAAAA              CGCCCCC TCG GGGGGCA              GCGACCCGCGCAGCG 100 173
        hrpA 4021613 .. 4021634 - -15.1  -3.02043   AATCTGGCGGTAATA           CGGGACGGC TCGC GCCGCCCCG            TATTCCTCGGTTGAC  79 74
 IUJ48_18445 NONE
 IUJ48_18440 4018276 .. 4018300 -  -5.7  -3.71848   CGGCGCCATCAACAA          GCTGACCCA TGCGCAC TGGGTCATC          GACCAGAAGCGCAAG  61 200
        dnaE NONE
 IUJ48_18425 NONE
 IUJ48_18420 NONE
 IUJ48_18415 NONE
 IUJ48_18410 NONE
 IUJ48_18405 NONE
 IUJ48_18400 4008174 .. 4008191 - -12.7  -4.36595   CATTGAAAGCGAAAA             CGGGACC TTGC GGTCCCG              TTTTTTTTTGCTGGC  95 50
        msbA NONE
 IUJ48_18375 4002260 .. 4002277 -  -8.4  -3.85698   GCCCCCTGGCAGAAA             CGCTCC GGAAGT GGAGCG              CGCTTGAAGCTAAAT  69 134
 IUJ48_18370 4001896 .. 4001954 - -16.7  -3.71873   CGATCGATATCGAAA GC-CGTATCGGCATGGCGCCGACCGGGCA TCT TGCCTGGT-GGCGCCAGGCCGGCAAGCGC CGCGTGGCGATGGCA  91 84
 IUJ48_18365 3999978 .. 3999992 -  -5.6  -3.53343   AAGTGTTGCCGCAAA               TCAGCG GCA CGCTGG               ACAGCAGCCTCAAGG  52 307
 IUJ48_18350 3994803 .. 3994838 -  -4.6  -3.38272   GATCAGTAGTCAGAA    GTCATGGACACAGGGA GGAG TCCCTCTACCCAAGCC     CACAACCGATCCCAG  51 93
 IUJ48_18345 NONE
 IUJ48_18340 3994516 .. 3994566 -  -7.6  -4.25283   AGCTGTTGAGTAAAA CCCAACTCATAAGACCGGGCAGAT ATT ATCCGCACGACACTATGAGTTAGC CTCTACATCCCACCA  75 52
 IUJ48_18335 3991271 .. 3991318 -    -4   -2.7782   CAATCTTGGAAGAAG CGCAACGTGTGGGGATCAGAGAG TGT CTCGATGATCCCC-CACAGGGGG TGTAATTGGTGTTGG  42 123
         rrf 3991059 .. 3991092 - -20.5  -5.00616   TTTTGGGGCAAAAAA     CAAAACCCCACAGGC GCGA GCCTATGGGGTTTTG      AGCAATAAAAGCCTG 100 36
 IUJ48_18315 3985869 .. 3985897 - -19.6  -5.27779   GGCAACATGAAAAAA        GCCCCCGGGACC TTGGC GATCCCGGGGGC        TTTTTTGTAGCGATC 100 52
 IUJ48_18275 3978724 .. 3978739 -  -3.2  -3.96188   AATCATAGGCATAAA              TGGTGC CAAC GCAACA               CCCCCAGTTACAAAC  58 105
 IUJ48_18270 NONE
 IUJ48_18265 3976600 .. 3976617 - -14.1  -5.46629   AACACGCGAAAAAAA             GCCCGGC GAGC GCCGGGC              TTTTTTTCAATTCTT 100 32
 IUJ48_18235 3969612 .. 3969622 -  -8.2  -3.99678   AGCTTGAGAATCAAA                 CGGG AAG CCCG                 GACTTCAACGCGGAG  72 30
 IUJ48_18230 3968518 .. 3968540 - -14.1  -5.75945   ACGGCCCAAAAAAAA           GCGGGACGC TCGCT GCGCCCCGC           CTTGCCAGTCGCGCG 100 59
 IUJ48_18225 NONE
 IUJ48_18220 NONE
 IUJ48_18215 NONE
 IUJ48_18210 NONE
        mauD NONE
 IUJ48_18200 NONE
 IUJ48_18195 3962377 .. 3962387 -  -2.4  -3.30441   GAGTATCGGTGACAA                 CCCC TAG GGCG                 CAACCGCAATCCAGC  45 84
 IUJ48_18190 3960826 .. 3960848 - -11.3  -2.73875   CTTCGCCGAACAGCA           CGGCATCGA ATTCA TCGACGCCG           ACTACGATATGGACA  59 502
 IUJ48_18175 3953906 .. 3953935 -  -2.9  -4.34486   ATGAAGAAGAAATAA      GCCGTCGCCGCCCG CATGC CGGGCG-C-ACG-C      ATCGATTTGGCGAGG  66 118
        parE NONE
 IUJ48_18155 NONE
        parC 3946893 .. 3946914 - -17.3  -5.18357   CAAGGGATGAAAAAA           CGGCGGACC CGAG GGTCCGCCG            TTGATGGCCGCGTCG 100 53
 IUJ48_18145 NONE
 IUJ48_18140 3944535 .. 3944556 -    -8   -3.1739   ACAGGAGGTGATCAA           GCGCGACCA TCTGC TGG-CGCGC           GTGCGCACCCAGGGC  53 381
 IUJ48_18125 3941751 .. 3941763 -  -3.3  -3.49618   CTCTCATACAACCAA                TCCTG ATT CGGGA                GGCGCGCCACCCGTG  49 1
        ectA 3941170 .. 3941180 -  -2.4  -3.48276   CGGTTTTCGACAGAA                 CCGC GTT GCCG                 CCTAGGGGGCGGGCA  47 27
        ectB NONE
 IUJ48_18110 NONE
        thpD 3938246 .. 3938267 - -17.3  -5.58074   GAACGACGAAAAAAA           GCCCAGGCC GAAA GGCCTGGGC            TGCGGCGCATGCAAG 100 169
 IUJ48_18100 3937105 .. 3937126 -  -7.9  -3.14132   GGCGCTGGCCATGAA           GACGCTGCC GCTG GGCACCGCC            TACGCGGTGTGGGTC  53 218
 IUJ48_18090 NONE
 IUJ48_18085 3935135 .. 3935167 - -19.9  -5.52384   CCGCCATCAAAAAAA      GGGGAGGAATCCGCC GAT GCCGGATCCCTCCCC      TTCGCGTTGCGCGCG 100 53
 IUJ48_18080 NONE
 IUJ48_18075 3932329 .. 3932348 - -13.6   -5.7946   CGGGCAAGAAAAAAA            GCCCGGTT CGAA AACCGGGC             TTGCGGGCGCTGCCG 100 76
        alaS NONE
 IUJ48_18060 3928748 .. 3928771 - -11.7  -5.07486   GATCGCCAACAAAAA          GGCCAGCCC GGGGAG AGGCTGGCC           TTTTTCATGAGTCGC 100 56
        rpsP 3927388 .. 3927398 -  -2.4  -3.14564   CGACGCGGGCATCAA                 GCCG CGG CGGA                 AACCTTGGCCGAGTA  42 11
        rimM NONE
        trmD 3925803 .. 3925825 -    -9   -3.6279   AAACCTGCCGAAGAA           CGGCAGAGAG ATG CGCCCCGCCG           GAACCGGCGGAGGGT  65 78
 IUJ48_18035 3924928 .. 3924952 -  -7.8   -3.6682   CCTCATCTAGGCAAA          GCGTTCCGGA GCGTG CCCGGAAGGC          GGATGATCCCCAGTG  63 69
 IUJ48_18030 3924069 .. 3924097 - -11.6  -3.53012   GGCCGCCTCCGGAAA        CCCGGGACGCGG CCGGT CCGCGCGCCAGG        GCGCGCAGTCCGGGC  72 81
 IUJ48_18025 NONE
 IUJ48_18020 NONE
 IUJ48_18015 3921109 .. 3921127 -  -6.6   -3.9941   GCCTGGACAAGGAAA             TCGCCCGC CTG GAAGGCGA             GATCGCCAAGGCCAA  66 251
         ndk 3917512 .. 3917522 -    -4  -3.53298   ATGACGCTAAAGGAA                 TTTC CGG GAAA                 TCAACGGCTGTGGAT  51 26
 IUJ48_17995 NONE
        ispG 3914537 .. 3914548 -  -7.2  -2.90075   TTTCTTTTAATGAGA                GGCG AGCG CGCC                 GTAGCGACGCGCAAC  49 5
        hisS NONE
 IUJ48_17980 NONE
        bamB NONE
         der NONE
 IUJ48_17965 3908831 .. 3908845 -  -2.8  -3.57144   TGGGGCACGCCGAAA               CATGTA CTC TACAGG               GTTTTCCCGGCCCGT  51 107
         hfq 3908475 .. 3908504 - -15.8  -4.36595   GAGCCAAAGCGAAAA       TGCCCGCC-GACG TCGAC CGTCCGGCGGGCA       ATAAAAGGTACTGCG 100 50
        hflX NONE
        hflK NONE
        hflC 3905098 .. 3905119 - -15.9  -5.08824   CGCCGACGGAAAAAA           GCCCCTTGG AAAA CCAAGGGGC            CTGGGGCTGGCGCGA 100 53
 IUJ48_17940 3903671 .. 3903681 -  -6.8  -2.55896   GTTACGAATCAATAT                 CGAG TTT CTCG                 GGAAATCCGGAAATC  47 76
 IUJ48_17935 3902309 .. 3902339 - -25.5  -4.55826   GTGAAAATACGAAAA       GGCCGCCGCCGGT AGGAG ACCGGCGGCGGCC       TTGCGAATGATAACC 100 46
 IUJ48_17930 3901294 .. 3901320 -  -5.9  -3.98236   AAAGTTGATGACAAA        CCTGGC-TTGCT TACC AGCAACGCCACG         TGGTTCCGGACGGCG  64 439
 IUJ48_17925 3901003 .. 3901032 -  -6.5  -3.14881   TAATTCCTGGATGAA       TGATTCTGGAATC AATA GATTCTGGAATCA        GAAATCAATACAGGC  51 30
 IUJ48_17920 3898510 .. 3898523 -  -2.3  -3.67611   GCGACGCGAAGATAA               CCGTC GCCG GACTG                CGTGATTCACCACTC  50 456
        rpoD 3895903 .. 3895922 -  -2.1  -3.74251   TAGAGGCCCAGGAAA            CTTACTG CCCTTC CAGGAAG             CTCTTCAGCTTGTCG  53 7
 IUJ48_17910 3895777 .. 3895812 - -19.8  -4.21194   CTGCATCACGGAAAA    CAAAGCGGGCCTCGGA TTGC TCCGAGACCCGCATTG     TTCTTTGGTAGGCCC 100 31
 IUJ48_17905 3893829 .. 3893854 -  -9.7   -4.8743   GGGAAAACAAACAAA         CCGGTTGTCGA CATG TCGGCAACCAG          CCTGGCTCGGCAAGG 100 84
 IUJ48_17890 NONE
 IUJ48_17885 NONE
 IUJ48_17880 3888852 .. 3888864 -  -3.3  -3.21912   GGGCCAATGCAGCAA                GGGCC GCC AACCC                CGCCACGACGACCGT  45 94
 IUJ48_17875 NONE
        cpaB NONE
 IUJ48_17865 NONE
        tadA 3884327 .. 3884340 -  -8.1  -2.64616   CCGCCAGCCACATCA               TGGCG AGGC CGCCA                GGCCATCCGAGGCCG  50 9
 IUJ48_17855 NONE
 IUJ48_17850 NONE
 IUJ48_17845 3881018 .. 3881034 -  -3.6  -2.57132   CTGTTCCGCGACAAC              GTGCTG TTCGC CGGCAC              CTTCGAAGACCCGCT  40 463
        dusA 3879159 .. 3879188 - -22.1  -4.61231   GGATATGCGCAAAAA       CGCCCGGGCGGCC TCGC GGCCGTCCGGGCG        TTTTTGCGTTCAAGC 100 56
 IUJ48_17820 NONE
 IUJ48_17815 3875384 .. 3875398 -  -5.7  -4.07568   CTTCCGCGCTCAAAA               GACGA TTTTG TCGTC               ACCAAACGCGCAAAA  66 47
 IUJ48_17810 3873994 .. 3874021 -  -4.6  -3.01712   CCGGCTCGGGGAACA        GGCCTGGACGCC GCGC GGCGAACTGACC         GACATGTCCGAGCTG  46 490
 IUJ48_17795 NONE
        aroC NONE
 IUJ48_17785 3866831 .. 3866849 - -12.4  -3.53012   GGCCCCGGCGTCAAA             CTGCCGGC CTC GCCGGCAA             TGCACTAATGTGCTG  75 192
        leuC NONE
        leuD 3845425 .. 3845438 -  -2.3  -5.09895   GAGTCATGGAAAAAA               CGGTC CTGT GATCG                GTATGAAGGGAGCTG  79 41
        leuB 3844275 .. 3844296 - -15.1  -4.81551   CATCGACATGAAAAA           GGGCCGCCC CTGC GGGCAGCCC            CTGGAATCGGGACAG 100 69
         asd 3842905 .. 3842933 -   -14   -3.5393   ATGACCCGGCGCAAA       CGACAAAGGCACC CGAA GGTGCCTTTG-CG        ATACGGCCTCGTCGC  81 70
 IUJ48_17720 3840816 .. 3840826 -  -2.4  -2.73243   AGGCATCGTTCAAAT                 CCGG GGA CCGC                 CAACCGGGCGCGGTT  38 9
        truA 3839955 .. 3839971 -  -3.5  -2.94099   GCGTTGCATGAGACA              GGCCTCC ATT GGGCGCC              GGCCGGCGTCCGGCT  42 39
 IUJ48_17710 3838810 .. 3838828 -  -3.7  -3.44051   GTCCGATCAGTATAA             GGGAACG CTCTC CGGCCCC             GGCGCGCCGGCCCGG  51 51
 IUJ48_17705 3837946 .. 3837963 -  -2.7  -4.58663   ATCAGGCTTCAAAAA             TTATCTG GCTT CAGAAAA              TGCCGCGAATCGTCT  67 170
 IUJ48_17700 3837682 .. 3837707 - -14.1  -5.01042   AACCCAAAGCAAAAA         GCCGCGA-AGTC CAG GACTGTCGCGGC         TTTTCAGGGTGATGC 100 78
 IUJ48_17695 3836578 .. 3836601 -  -6.6  -5.44119   GGTACGCCAAAAAAA          TAAAGCCCGC TTTC GCGGGCCGCA           AATGGTCCGGTCGCT 100 51
 IUJ48_17685 3834546 .. 3834565 -    -5  -4.42788   GGGAATCCTACAAAA            TGAAACGG GGCA CAGTTTCA             TGAATTCTCACGAAC  70 73
 IUJ48_17680 3834277 .. 3834287 -  -4.6  -3.53012   CCCCCTGCCCTGAAA                 GCCG GAT CAGC                 TCCGCAGCCAGCCCG  53 21
 IUJ48_17660 3832050 .. 3832108 - -10.8  -3.14132   GCGCTGGTGGACGAA GCCGAACTGGCGCGGCGGCGGCAGG ATCCGCCCTA CCAGCCGCCGCCGGCCCAGA-CGCC GTGGCAGGAGCTGTA  64 239
 IUJ48_17635 3825966 .. 3825978 -  -6.2  -3.01712   CGGGCCGGTCCAATA                CGCC TATAC GGCG                TTCATCTGCCTGATC  48 344
 IUJ48_17575 3811104 .. 3811120 -  -7.9  -4.07568   CCCCGCCCCGTAAAA              TGCGGGG ATT CCCCCCA              TCACAAGGACCTTCC  71 407
        hemN 3809397 .. 3809452 -  -5.5  -3.73534   GAAGCGCAGCAAGAA GACCGTCAG-CACCCACAAGCGCCGCGC CAT GCGCAA-GCT-GCAGCTGTCCGACGATC TGGCGCTGGCCCTGT  58 121
        rfbD 3807258 .. 3807288 - -14.8  -4.03806   AACGAAATTCAGAAA       CGACAAACGCGGCT GGT AGCCGCGTTTATCT       GGTTGTCTTGCTGAG  95 289
        thrS NONE
        infC 3804647 .. 3804679 - -15.6  -2.52623   GGTCGCGGAGAAGAG     CGGCCAGGCCTTCCC GGAC GGGAAGGCC-GGCAG      GAGCTTTATGCCGCC  77 31
        gshB NONE
 IUJ48_17535 3803108 .. 3803123 -  -3.2  -3.55946   TTAGCCGAAATAATA              GGACAA GTTC CTGCCC               GTCAGTCTACCCGCA  51 27
 IUJ48_17530 3802641 .. 3802669 - -15.3  -4.55295   TGCCGTACAAACAAA        TAACGGGGCTGGC TGA GCCATCCCCGTCA        TGTGCAAGAACCGCG 100 101
        ptsP 3800867 .. 3800886 - -16.4  -5.40072   GCCGGCGCAAAAAAA            GCCCGGCG CATG CGCCGGGC             TTTCCGTTCGTTGGG 100 65
 IUJ48_17510 3798037 .. 3798067 -  -3.1  -5.42259   CCAGCGGCAAAAAAA      GA-GGGCGGGCCGC ATGC GGTGACCGCCCATC       AAAGCACAGGAGAAA  93 78
 IUJ48_17505 3797540 .. 3797557 - -14.1  -4.67038   TGCCGAAAACGAAAA             CGGCCGC GGAT GCGGCCG              TGGCAGAAATGTCCG 100 47
 IUJ48_17500 3795884 .. 3795896 -  -4.7  -3.82946   CCAGGGGAAACAGAA                CCACG CAC CGAGG                CGGACGCCCCAGCCC  60 60
        rpmI NONE
        rplT 3794841 .. 3794871 - -16.2  -4.09864   ATCCAGCCTTCAAAA       CGCAAACGGGGCCA TTA CAGCCCCGTTTGCA       GCGATGCGCGATGAG  95 54
        pheS NONE
 IUJ48_17480 NONE
 IUJ48_17475 3791014 .. 3791037 -  -2.4  -2.98813   AGCCGATAACAATTA          CCGACAAAGCG TAT CACTCC-TCGG          CGTCTGGCGCCGCGG  41 15
 IUJ48_17470 3790324 .. 3790342 -  -3.1  -5.85178   AATACTCAAAAAAAA             TTTGCGT GCCCT ACGCAAT             GCCCGCAACACTCAC 100 221
 IUJ48_17465 3790129 .. 3790158 - -19.5  -4.13654   CCCGGAAATGAGAAA       GGGGGTTAGTGAT TTTC ATCACTAACCCCC        TAGGGTATTGCTGGT 100 37
 IUJ48_17430 3785586 .. 3785617 - -11.5  -3.21772   AATCCGGGCATAACA      GGCGCGCGGTCGGA TCAGG CCCGCCC-CGCGCC      GCGCGATGCTCAGTC  68 35
 IUJ48_17425 3784372 .. 3784393 - -11.6  -5.27335   CCGCGCAAACAAAAA           GGCCACGA GGGGTA TCGTGGCC            TTCTGGATGGAACGC 100 206
 IUJ48_17420 3783654 .. 3783682 -  -9.6  -3.15544   CCTCATCGCCATCAA       CGC-CGGCGAG-GA AAT CCGCTCGCCGTGCG       ACAACTGCACGATCT  60 192
 IUJ48_17405 3780695 .. 3780710 -  -4.6  -3.90328   GACAAGCGCGATAAA              GCCCTG AATC CAGGCC               GTTTCCGCGGCACCG  60 96
 IUJ48_17400 3780299 .. 3780319 -  -2.5   -4.0896   AAACCCGGCCGAAAA            TGGCATTTT CAG AGAATGCCG            TAGCGCGGTTCACCA  58 13
 IUJ48_17395 3779402 .. 3779423 - -18.7  -4.27316   CTTCTCAACGCAAAA           CGCCGCGGC CTGC GCCGCGGCG            TTCTTGTTTGCGTCG 100 69
 IUJ48_17380 3777486 .. 3777512 -  -3.7  -2.92018   AATACTGCAACGATA        GCATGCCGGCCCT ACG ACGGCCG-CA-GC        GCCAGGGGACGGCGC  44 10
 IUJ48_17375 3777200 .. 3777219 - -16.4  -3.19602   GCCTGGAGATGAACA            GCGGCGCC GGCC GGCGCCGC             TCCATCCGCCCTAGC  89 36
 IUJ48_17370 3776559 .. 3776569 -  -5.4  -2.65476   AGCAGCGACGATAAC                 CGAA ATT TTCG                 TCGCCATCTCCGGAA  43 109
 IUJ48_17365 NONE
 IUJ48_17360 3775006 .. 3775026 - -19.7  -4.93877   GGCCAGGAAACAAAA            CGGGCCCCG AAA CGGGGCCCG            ACAGTAACAAGCAAT 100 78
 IUJ48_17350 NONE
 IUJ48_17345 3771959 .. 3772013 - -14.9  -3.27525   CGCCGGGAAACTTAA GCGCAAGCACGACGGCCCCGATTGGC TTGC GTCAACCGGGGCCG-CGGGATCGCGA CGATGCACGCGCGTC  83 40
 IUJ48_17340 3771512 .. 3771563 - -11.5   -3.4811   GTGGGGATAACAATA TGTGGGCGGCG-GCCGCGCCGCCGGG TCC CGCGGCAG-GCGGCGCGCGGCCCT-A GTCCGGCAGGTGGTC  72 23
 IUJ48_17335 NONE
 IUJ48_17330 NONE
 IUJ48_17325 NONE
 IUJ48_17320 NONE
 IUJ48_17315 3766095 .. 3766117 -  -6.2  -3.30771   CCAGACCCTGCACAA           GGAAGCGC TCCTGTG GCGCGTCC           GCGAAGGCCTGCGCC  52 412
 IUJ48_17305 3764062 .. 3764076 - -12.8   -3.7574   GGCAGCAGGAAAACA               CCGCCG CGC CGGCGG               ATTGACAAGCCCCGC  84 473
 IUJ48_17290 3761107 .. 3761137 -  -7.5  -3.96216   CTGGCACTGAAAGAA      GCC-CCGCGCAGGCC CTG GGCACGC-CGGCGGC      GCCCGCCGCTCGCGG  70 46
 IUJ48_17275 3758749 .. 3758774 - -16.1  -2.53876   TGGCACCGCAATGCA         GACGGGGCGCC CATG GGCGCCCCGTT          TCATTTTCCCGCTCC  77 58
 IUJ48_17260 3753315 .. 3753351 -  -4.9  -2.70932   CTTCGGCGGCAAGGA    CCGACGCCAGCCCATCG CGC CGCTGGACGATCACCGG    CTGGCGCTGAGCTTC  43 230
 IUJ48_17235 3745363 .. 3745376 -  -2.4  -4.18018   CGCGGCCATGGAAAA               GTTC TTCATC GAAC                ATCTCAAGCCGTAAG  58 29
 IUJ48_17225 3742797 .. 3742852 - -18.3  -3.05384   CGGGCGGCGACTGAA CGGGCGGCGGGCCTTGCGGCCGCCGTC GCCC GATG-CGGCCGCAAGGCCCGCCATT-G CCCTTACGCCCTTAC  89 37
        dinB 3740839 .. 3740859 -  -8.2  -3.36557   AAGCAGGTCAAGCAA            CGCCGCGA GTCCA TCGCCGCG            TTCGAACAGGCCGGC  59 283
 IUJ48_17130 3726407 .. 3726425 -  -6.8  -3.53811   GCCACCCTTTTTAAA             CATGCATT AAT AATACATG             TTTAAGTGCGGCGCA  57 59
        hmpA 3725136 .. 3725152 -  -7.2  -2.78463   ATGGCCGCCAGGATA              CACCGG TCAGG CCGGCG              CGCCACCGCTGCCGA  48 15
 IUJ48_17120 3724593 .. 3724638 -  -5.8  -3.37796   GCCCAGCACCCATAA CCCGCCCTCATGGTCCGGCG TCATGG CCCCGACCCTCGGGGGCTGG CGTCACGGCCGGGCT  53 72
 IUJ48_17115 3723135 .. 3723189 - -22.3  -3.54424   GGTCACTCGCGGAAA TGGGA-ATCGGCCA-CCGCCCGCGCGC GGG GCGCAGGGGCGGATGGCCGATATCCTA TTGAGCGGTGAAGCG 100 92
 IUJ48_17110 3722140 .. 3722152 -  -6.9  -3.24232   CTCCGCTCAAAGAGA                GCCAC TAT GCGGC                GCCGCCCCCGCCCCG  54 73
 IUJ48_17105 3721104 .. 3721162 -  -5.1  -4.66163   ACCGCCATGGAAAAA CCGCCCGTCCGGAACGCTCGGG-GTGCCG CCT CGGCACGCCCGGCCAATACG-ACAGGCTA CCCGAAATACTCGCC  77 23
 IUJ48_17100 3720167 .. 3720183 -  -6.5  -3.56594   TTAAATCCCGCCAAA              TCGGCCG ATT CAACCGA              TCATTCATCGCCCAT  59 60
 IUJ48_17095 3718655 .. 3718688 - -17.4  -3.05844   GCCGCGACGGCAACA     GCGCCGCGCTCGGC GCGGCG GCCCAACGCGGCGC      GCAGGCCGCCGGCAG  88 496
 IUJ48_17085 NONE
 IUJ48_17080 3716541 .. 3716557 -  -2.9  -3.41222   TCGGAAGCGGAAACA              GGCCC TCATGTT GGACC              CTCGCCGCGCGCCCG  47 87
 IUJ48_17075 NONE
 IUJ48_17070 3714484 .. 3714496 -  -4.7  -4.42788   GTGAATTCCAGAAAA                GCCTC GGC GTGGC                CAAGAACATCCTCAG  72 388
 IUJ48_17060 3712570 .. 3712602 -    -9  -2.52464   CCGCGCTGCAATTGA     CCGGCCTG-GGCGAC TACG GCCGCCGCTGGCCGC      ACCAGTTGTCCGGCG  51 395
 IUJ48_17030 3705426 .. 3705447 -  -7.9  -3.15249   CACATCGCCGAGGAA           GTCGCCGCCG TGG CGGCCGCG-C           GCGGCCTGCGCCGCA  53 409
 IUJ48_17015 3702047 .. 3702079 -  -7.6  -3.53811   TGGACCGGGCTCAAA     CAGCAGGCCGCCGCC CCGT GGATGCG-CCTGCCG      CGCGCATCCACGCCG  60 51
 IUJ48_17010 3700794 .. 3700852 -  -2.4  -3.18264   CTGCGCATCCAGGAA CTGTCCAAC-GACG-AGGTCGAGCAGCGCG TGG CCCGC-GCCCT-CCTGCGGCTGGTGGACAG TGCCGGCGAACCCAC  44 275
        nirK NONE
 IUJ48_16995 3698714 .. 3698749 - -11.8  -3.47896   GAAGGAAGGAAGGAA    GGA-AGCGGCCCGGCCA TCG CGGCCGGGCTCCTGTCC    GCGCCTAGCGCGCGG  75 30
        aceE 3695776 .. 3695833 -  -9.6  -2.62396   GACCCGGTGACAGGA TGCCGGCGTCG-CGGCCCGGCCGCCCG CGCGC CCTACGGCAAGGCCGCCGACACCGCCT CCGGATCCAGCCCGT  55 0
        gorA 3694114 .. 3694137 -   -21  -2.71681   CAATGGCGCCAAGGA          GCGCGCGCCG GCGG CGGCGCGCGC           GATGATCGAGCGGCT 100 124
 IUJ48_16975 3692207 .. 3692221 -   -10  -3.64703   GCTGCGCCACTGAAA               CGCTGA ATC TCAGCG               GCGCGAATCGAGCGC  71 20
 IUJ48_16965 3689786 .. 3689816 -  -8.2  -3.17901   ACAGCGCCAACGCAA       CCGGGATCAGGC GCACGCG GCCTTTTCCCGG       GCGATCAGCTCCGCC  59 1
 IUJ48_16960 3688793 .. 3688805 -  -4.7  -3.28712   TCTGCTGCGCGAGAA                GCTGC GGC GCGGC                AAGCGCGCCTGAATT  49 134
 IUJ48_16930 3682565 .. 3682603 -  -2.2   -3.5393   ACGATTTCGGCGAAA   TCTACGCCGGCCTGCAGC GGC GCTACACCGCGCCGTTGA   TGCGCATCCTGGCGC  50 279
 IUJ48_16920 NONE
 IUJ48_16915 3678307 .. 3678330 - -19.6  -5.75342   GTGCCGTAAAAAAAA          CCCGCGCACG TCAC CGTGCGCGGG           TTTGGGATCGGGCGC 100 93
 IUJ48_16910 3677533 .. 3677545 -  -4.7  -3.14931   TTGAGGGGGGACGAA                TGCGC TGC GCGCC                GGTGATCGATGCATA  47 133
 IUJ48_16905 3676226 .. 3676244 -    -3  -3.03124   CGGGATGCGGCAAGA             CCGGGC TTATTCG GCCAGG             CGCGGGATGGCGGGA  42 13
 IUJ48_16900 NONE
 IUJ48_16895 3674375 .. 3674424 - -12.8  -2.56715   AGGTTGATGAAGCGA TGGCGCATGCGCCCCCATGCCGGC GCGG GCCGACCTGGCGGCGC--GCGCTA CGTCAGCGCGGTGAA  67 23
 IUJ48_16890 NONE
 IUJ48_16885 NONE
 IUJ48_16880 NONE
 IUJ48_16875 3670410 .. 3670446 -   -13  -2.82623   CCTGCCCCACAACTA   CAGCGCCAC-CC-CGGCG GGC CGCCGCGGCGCGGTGCTG   CCGCGCCACGTGCGC  64 440
 IUJ48_16855 3667186 .. 3667196 -  -8.2  -4.06384   CTGCAATACCAGAAA                 GGCG GAA CGCC                 GCTGCGCATGCTGGG  72 349
 IUJ48_16830 3662204 .. 3662219 -  -6.8  -2.70932   CCTGTTCCTGAACCA              GCGG-CG CCG CGACCGC              GAATTGCGCGTGGAC  46 192
 IUJ48_16800 3654003 .. 3654025 -  -6.8   -4.4767   GGATTCAGTAGAAAA           GCGCGTCGGC CAC GCCGGAACGC           GGCGCGTAATGACGC  79 472
 IUJ48_16745 3638878 .. 3638902 -  -8.5  -3.53012   CTGCTGCTTGGCAAA          GCACCGCTGTC GCT GCCAGCAATGC          GCCGATGGAGTTCCA  62 513
 IUJ48_16735 3636570 .. 3636584 -    -7  -3.62096   CCCGACGACGTGAAA               GGCCTG GCC CTGGCC               GGCACCAGCGCATTT  60 371
 IUJ48_16685 NONE
        torC 3628065 .. 3628085 -  -7.5  -2.57132   TGCGCGCCGGAGAAC            CGCCAGC GGCCCGG GCCGGCG            TCCTCATCGCCAAGC  50 152
        torD NONE
 IUJ48_16665 NONE
        nrfD NONE
        ttrA 3619707 .. 3619722 -  -3.9  -3.53444   GCACGCCGGTGGAAA              CCGAC GTGCCT GCCGG               CGGGCTGGAACTGGT  49 122
 IUJ48_16570 3605251 .. 3605266 -  -7.5  -3.01712   CCTGGCGTCGGAACA              GGCGC GCCGCG GCGCC               TGACACCATACCCGC  54 48
 IUJ48_16555 3601527 .. 3601569 - -19.9  -3.51232   TGTGGCGCAAATGAA GCAACGCGAGGGACGCGCCG GTGC CGCCGCGTCCCCCGC-CTGC AAGGCCTTACTCGGG 100 32
        pdeR 3598915 .. 3598942 -   -12  -2.56596   TGGCCGAGGAATTGA        TCGGCAGCG-GCG AAT CGCACACCGCCGA        ATGGTTCCAGGCGCG  62 348
 IUJ48_16540 3595778 .. 3595795 - -14.1   -5.7946   CTCGCAACAAAAAAA             CGGGCGC CAAA GCGCCCG              TCCGTCCTGCCGGGA 100 54
 IUJ48_16535 NONE
 IUJ48_16530 3594524 .. 3594548 - -13.5  -3.04144   GGGCCACCTTCAACA          GCGTCGCCGGC GCC GCCGCCAACGC          CGTGCCCTACAAGAG  69 473
 IUJ48_16495 3587685 .. 3587697 -  -6.2  -3.25823   GTTCTCGCACATCAA                GGCG CATTT CGCC                GAAGGCAGCAAGAGC  52 472
 IUJ48_16480 3583581 .. 3583605 -  -2.8  -3.31263   ACTGGACCGCTAGAA          CCGGCG TCCCCGCCTCAAC CGCCGG          CGATCTGCTCCAGAT  47 15
         tet 3580341 .. 3580355 -    -7  -3.15249   GACAGTGTGCACCAA               GGGGCG GGC CGCCAC               TACCGGGATTTGCGC  51 71
 IUJ48_16455 3579287 .. 3579316 -  -6.4  -3.70149   CGGACAGTATGGAAA      GCGCC-CCGC-CGG CGAG CCATGCAGCGGCGC       TCATAGCAGCTATTC  62 92
 IUJ48_16450 NONE
 IUJ48_16445 NONE
 IUJ48_16440 3576407 .. 3576446 - -18.6  -2.70298   GGGCCGAACGACAAT  GGCGCCACGAGCCACGAAA GCG CCCCG-GGCTCGCGGCGCC  CGCCTGCGTTCAGCG  87 35
 IUJ48_16415 NONE
 IUJ48_16410 3569084 .. 3569112 -    -8   -4.1891   TCGCGCCAAGACAAA       CCTTGCGCCGGCG TTGC CGC-GGCGCGCGG        ACTGCCCCTATCATC  71 502
 IUJ48_16395 3567012 .. 3567040 -  -8.8  -3.40403   GGCCCTGCAGCAGAA       CGGCC-GCCTGAC CAAC GTCGAGCTGGCCG        AGCAGATCGGCCTGT  61 377
 IUJ48_16385 3566107 .. 3566126 - -13.6  -4.23892   GGCAAGTAGGCAAAA            GGCCTGAC GCAA GTCAGGCC             TTTTTTTCTTTGCCG 100 90
 IUJ48_16365 NONE
 IUJ48_16360 NONE
 IUJ48_16355 NONE
 IUJ48_16350 NONE
 IUJ48_16345 NONE
 IUJ48_16340 NONE
 IUJ48_16335 3554669 .. 3554688 - -11.4  -2.71011   ATTTCGCGCGAAGCA            GCCGGCGGC GCG GCCGC-GGC            CAGGGCCGGTCAAGG  62 35
 IUJ48_16325 3550627 .. 3550655 - -10.9  -3.01712   GCGGGCGTTGGAACA        GGCCGCGCTCG GCGATTT CGTGCGCAGCC        TGCCCGAGGGCCTGG  62 380
 IUJ48_16315 3546261 .. 3546277 -  -3.5  -4.43879   ACGATGGAAGGAAAA              CGGCGTC ATG GCAGCCG              GCCCGCCAGCGTCCA  66 119
 IUJ48_16310 3544861 .. 3544894 -  -7.4  -3.03124   GCTGATGCGGCAAGA     CGTGGC-GCCGGC GCTGGGCTT GCCGCCTGCCACG     CTCTGGCGCAGCCTG  54 89
 IUJ48_16290 NONE
 IUJ48_16270 3536762 .. 3536800 -  -5.7  -4.36914   TGTTGCTGCAGAAAA   TCGCCGGCGGCCGCCCG GACAG CGTGCGGCTGGCGCCCA   CGCTGGTGGTGCGCG  72 146
 IUJ48_16260 NONE
 IUJ48_16255 3532548 .. 3532576 -  -7.9  -2.80443   GGACATTGGACGAGA        CGCTGCACGCGGC ATT GACGCGCGCCGTG        GCCGCCGTGCCCGCC  49 387
 IUJ48_16245 NONE
 IUJ48_16240 NONE
 IUJ48_16235 3529216 .. 3529254 -  -9.5  -2.65264   CCACCACGCAGATCA  TGCTGGACCTGGCCGACGC CGC GCG-CGGCCAGG-CCGACG  AGGCGGCCAGGCGCC  55 180
 IUJ48_16225 3527573 .. 3527605 -  -6.1  -2.73875   CGTCCTCCAAGACGA      CTGCCCTTTACGCCC GAG GTGCGGAAATGGCCG      TTTTCCCCGTCAACA  46 137
 IUJ48_16220 3526056 .. 3526066 -  -2.4  -3.09327   TCACCTGACTCAATA                 TCGG TAC CCGT                 TCGAGGTATGCCGTG  42 283
 IUJ48_16215 3525107 .. 3525134 - -13.6  -4.80882   ATTCCAGATGAAAAA        GCCTTGGAAACAC AAT GTGTT-CCAAGGC        TTTTTTGTTTCTACA 100 271
 IUJ48_16190 NONE
 IUJ48_16185 3519522 .. 3519540 -    -3  -4.07568   TCCTGGTGGTGAAAA             GCTCGG TGCACTT CCGCGC             CGACTTCCAGCCGAT  58 217
 IUJ48_16170 3515625 .. 3515659 -   -13  -4.61527   AAAATGGCTGAAAAA     GCGCATGAATACTGGA ACT TTCAATATTCACGCGC     CGCCATCCGTAACGA 100 99
        speG 3514772 .. 3514800 - -26.1  -3.59979   CGCCCTGATGCGAAA        CGCCCCGGCAGGA ATC TCCTGCCGGGGCG        TTTTTCCACATCGGC 100 147
        cadR 3511726 .. 3511773 -   -17  -2.62263   AGGGTTCTCATATTA CGCCATG-GCCGCGCCGGGGA CGGCTAT CCCCCTGCCCGGCGCATGGCG ACTAGGACGTTCAAC  81 36
 IUJ48_16150 3511026 .. 3511040 - -12.8  -5.27779   CGCAACACGAAAAAA               CCGGCC AGC GGCCGG               TTTTTTATCGAACCA 100 50
 IUJ48_16140 NONE
 IUJ48_16135 NONE
 IUJ48_16130 3506454 .. 3506483 - -17.8  -2.84812   AGCCAGAGTAGCACA       GGGCGCGGCCCC GAGACA GGGGCCGCGCCA        GGCCTCGCTCGCCGC  87 102
 IUJ48_16125 NONE
 IUJ48_16120 NONE
 IUJ48_16115 NONE
        lpdA 3501222 .. 3501256 - -23.6  -4.84527   CCCACACAGGAAAAA     GCCGCGGCGGCGGGCA GGA TGCCCACCACCACGGC     TTCGGATACACCACG 100 48
 IUJ48_16095 3495878 .. 3495896 - -10.2  -3.76492   CGGAACTGCACGAAA             CGGGCCTG CTG CAGGCCCT             GGGAATCCTACCGGG  74 57
 IUJ48_16090 3493756 .. 3493767 -  -3.6  -4.07568   TGCCTGCCGGGAAAA                CCCG CAGG CGGA                 TCAGCCCGGCGGCGC  60 26
 IUJ48_16085 3493234 .. 3493265 - -10.2   -5.0133   CACCTGCCCAAAAAA      CT-TCGGGGAGACCA TAA CGATCCCCCCGACAG      TCAACCCGAGCAAAC 100 52
        gspD NONE
        gspE 3487271 .. 3487290 -  -5.6  -3.53224   CAGGCGCCGGCCAAA            GCGACGCCC TGA GCGCG-CGC            GATCACGCTCCGCCG  55 48
 IUJ48_16010 NONE
 IUJ48_16005 3476296 .. 3476314 -  -7.3  -2.57931   TGGATTCTGGAGAAG             GCGCGGC GTCAG GGCGCGC             AACGCAACTGGGGCT  50 15
 IUJ48_16000 3474000 .. 3474044 - -21.6  -2.70932   GTCCGCCTCTAACGA CAACGCCCCGCGTCGTCTCCC GGGC GGAAG-CGACACGAGGCGTTG CGCCGGGCGCGGCCA 100 68
         ggt 3471359 .. 3471369 -  -8.2  -2.70354   CGCGTCAGAAACCCA                 CGGC CTG GCCG                 TCACGGCGACTGTCG  53 4
 IUJ48_15985 3469653 .. 3469698 - -20.4  -4.00526   AACCGTAGAACGAAA GCGGCGGACG-GAGCCG-GCCC GTCA GGGCACGGCGCGCGGCCGCCGC GGGAAACGACCGGCC 100 87
 IUJ48_15980 NONE
 IUJ48_15975 NONE
 IUJ48_15970 3465864 .. 3465898 -  -9.2  -2.78715   AAGGCCGCCATGATA    CCGCCTGTGGCGCGG CCGGCC CCGCGCAAC-GGCCG     CCGCCCGCCGCCGAT  58 64
 IUJ48_15965 3465150 .. 3465161 -  -3.6  -4.29304   TGACCATAATATAAA                CCCG CCCC CGAG                 GCTTTGCACGCTTTT  64 142
 IUJ48_15960 3464483 .. 3464499 - -10.8  -4.25056   TATGGGATGAAGAAA              GGCCGC GCAAT GCGGCC              CGAAAAAGGGGGCTT  86 40
 IUJ48_15955 NONE
 IUJ48_15950 3461876 .. 3461891 -  -2.4  -2.82516   TGCTGTACCACGACA              GCACGG TGAT CCGCTC               GCCTTTCGCCTGTCG  39 343
 IUJ48_15940 3460539 .. 3460567 - -11.7  -2.91274   GGCAGGCGAAGGATA        CCGCGCCCTTCAT GAA ATGAAGGGCGCTC        GGAAACAGACTGAAA  64 103
 IUJ48_15930 3458121 .. 3458135 -  -4.2  -5.28176   TCTATCGATAAAAAA               CTTTGC CAT GCAAGG               CTCCCTGACTACTGC  93 34
 IUJ48_15925 NONE
        adeC 3453403 .. 3453428 - -20.5  -3.64703   CGCGCGCCATGCAAA         GCGGGCCGATC GAAA GATCGGCCCGC          TTTTTTTACCACTGT 100 57
 IUJ48_15905 3451128 .. 3451152 -  -7.1  -3.40299   CTACTACAGCTACAA          GTGGGCCGA GGTGCTG TCGGCCGAC          GCCTACGAAGCATTT  58 289
        aceE NONE
        aceF NONE
        lpdA 3439167 .. 3439197 - -17.7  -4.42238   GGACCCCAATGAAAA      CAGCCCGAAG-GCC GTTG GGCGCTTCGGGCTG       CGGTGCCGGCGTCCG 100 70
 IUJ48_15865 3438168 .. 3438185 -  -8.3  -3.55761   CAGGCACGCCCCAAA             CCGGCGC GCGG GCGGCGG              CCCGGGGCTCGATGG  62 41
 IUJ48_15860 3436995 .. 3437034 -  -2.6  -3.93136   ATACCCAGGCATAAA  TCGCCCTGGCGCGCGGCAA CGA TTGCCGCGCTCCCTT-CGC  TTTGGCGCGCCCTCT  55 112
        flhD NONE
        flhC NONE
        motA NONE
        motB NONE
 IUJ48_15810 NONE
        cheA NONE
        cheW 3424377 .. 3424402 - -14.1   -4.6635   AAATCGTTAACAAAA         GCGCCATATCG AATC CAATATGGCGC          GCCCATCTTCCTGGG 100 101
 IUJ48_15795 3422599 .. 3422618 -  -3.4  -2.53876   GTCCACCGGAATGGA            CGGCGCCA TGTT TGCCGCTG             TTGCCACCGCCGCCC  39 41
 IUJ48_15790 NONE
 IUJ48_15785 NONE
        cheY NONE
        cheZ 3419495 .. 3419512 -  -6.2  -3.06796   TTGCAGTCTACCCAA             GGGCGC CGCTTC GCACCC              TTAGGGAATACGTCC  49 99
 IUJ48_15770 3417742 .. 3417776 -  -3.3  -2.73635   GAAACGGGGGGAAAG     CGGCGCTATTCCCGG ATGCG CCAGGCCTGGCCCCG     GCCCGGGCGCCGGCG  40 82
        flhB NONE
        flhA NONE
        flhF 3411487 .. 3411514 -   -20  -4.56597   TCCCTGCTTCAAAAA        CAAACAGCCCGC ATCC GCGGGCTGTTTG         CTTTCGAGGCCCCGC 100 59
        flgB 3409249 .. 3409269 -  -5.3  -2.82521   CCTATGAAAATCAAT            CCTGGATGG CGG CCATCATGG            TGCGGATACGCCCCG  45 0
        flgC NONE
        flgD 3408006 .. 3408023 -  -8.3  -3.63968   CTCTAAATTTTGAAA             CCGCCGC CGTG GCGCCGG              CTGATAATCAAACCG  65 48
 IUJ48_15720 NONE
 IUJ48_15715 NONE
        flgG NONE
 IUJ48_15705 NONE
 IUJ48_15700 NONE
        flgJ NONE
        flgK NONE
        flgL 3398871 .. 3398901 - -17.7  -2.91264   CCCTGTACGCACACA      CGGACGCT-CCGGT ATCC ACCGGAAGCGTCCG       TAAGGGCGCGCAACA  87 78
 IUJ48_15680 3396879 .. 3396902 -    -3  -3.06969   CAATGCATTGCAATA          CGCTGGCGGA TCAC TCCGTCAGAA           GGACTCCCAATCGTC  43 20
 IUJ48_15675 NONE
 IUJ48_15670 NONE
 IUJ48_15665 3392446 .. 3392481 - -10.2  -2.62396   GACCGGCGGACAGCA    TTCGACCCGGCGTCCG CGAA CGGGCGTCGGGTCGGC     TGGGGTGACGGCCGT  58 85
 IUJ48_15660 3390585 .. 3390600 - -11.8    -5.626   GAGCGCATAAAAAAA              CGGCCC GCGC GGGCCG               TTTTTTTCGATGGCG 100 47
        fliE 3378389 .. 3378401 -  -6.9  -4.82901   GCGCCTGGAGAAAAA                CGCCC GAT AGGCG                CACTGCGAGCCAGGA  84 159
 IUJ48_15550 3372232 .. 3372272 - -14.6  -3.06831   CGAAGTCCTATTGAA CCCGCGCCCGTCCGC-GCC GGCC GGCCACGGCCGGGCTCAGG  ATTGCTGTTCCAGCC  80 21
        folC NONE
 IUJ48_15520 3365928 .. 3365970 -  -4.1  -2.64243   GCACACCCGATACCA CCAGGA-TGGCCAGC-ACGAC GAA GTCGAAGCCGGTCACTACTGG GCGGCAATGAAACCG  41 19
 IUJ48_15515 3365482 .. 3365498 -  -2.1  -3.28181   TAAAGCCAATCAATA              CGGCAGC CAC GTCGCCA              GGGATGGCGGCAGCC  44 3
        purF 3363883 .. 3363902 -   -15  -6.24157   ACGGACAAAAAAAAA            GCCGCTCC CCAG GGAGCGGC             TTTTGCATGGGGCGC 100 48
        rpsB 3356698 .. 3356717 -   -15  -3.07192   AATTTTGCTAAGACA            TGCCCCGG CGGG CCGGGGCA             TTGGTGTGATTCGAT  80 163
 IUJ48_15475 3355743 .. 3355776 -  -8.2  -4.46073   GTTTAAGACAAGAAA     TAGGCCGG-ACTAGA AAATA TCTAGCGCCGGCCTG     TAAGGACTACCCTGA  84 43
 IUJ48_15470 NONE
         frr 3354287 .. 3354344 - -16.4  -2.62946   AATACGGGAAAAATC CGCGCCGT-CGATCCACTGCTGCGCCAG CGAG CTG-CGAGGCAATGGATGGGACGGCGCG CGAAGGCAGCAATCC  81 85
        uppS NONE
 IUJ48_15455 NONE
 IUJ48_15450 NONE
        rseP NONE
        bamA 3347518 .. 3347541 -  -9.4  -4.25074   CACTAAACGGCAAAA          GGGCCGGGCC GGCG GGCCCCTCCC           TTGTTTTCAAGCGTA  81 48
 IUJ48_15435 NONE
        lpxD 3345744 .. 3345767 -  -4.5  -3.09787   CGAAATGAGATAAAT          CTTGCGGCGC CGGAC GCGCC-CAGG          GCAGCGAGGATGCGC  45 42
        fabZ NONE
        lpxA NONE
        lpxB NONE
        rnhB NONE
 IUJ48_15405 3341746 .. 3341778 - -10.6  -2.84098   GGCGGCAAGCAATGA     CTGGCAGCGCGCGCGC GTG GCGCG-GC-CTGTCAG     GGAATGAGCGACCGG  60 135
 IUJ48_15400 3341336 .. 3341367 - -12.2  -4.07885   GACCGCGGCTGAAAA      CGATCAGGGCGCGCC GTT GGCGCGCCC-ATCCG      TCACTGTCGCACCGC  85 26
        ppsA 3337900 .. 3337923 - -19.6  -5.40072   GCGGCCCGAAAAAAA          GCCCGCGCCA TCCC TGGCGCGGGC           TTTTTGCATGGACGC 100 48
 IUJ48_15375 NONE
 IUJ48_15370 NONE
 IUJ48_15365 3333203 .. 3333223 -  -8.3  -4.08948   CAACGCGAGAAAGAA            CGCATCATG AAG CACGATACG            CGCGCCTCGCGCAAG  72 89
 IUJ48_15355 NONE
 IUJ48_15350 3331852 .. 3331893 -  -3.3   -3.4252   TCCTATTGATGACAA TGTGGCGGCGTCGACCTGC CGCC GCCGGGCACGGCCGCCCCG  TCGCGCTGGCTACAG  47 35
 IUJ48_15345 NONE
 IUJ48_15340 NONE
        mmsB NONE
 IUJ48_15330 3327928 .. 3327952 - -21.5  -2.58579   TCAAGGTGCGACAAG          GCTTGCGGCGG CCC CCGCCGCAAGC          GGCTCAACGCGGCGT 100 29
 IUJ48_15325 3326853 .. 3326883 -  -3.8  -3.55444   TCTTCATCCCGCAAA       CGGTCAACCTGGAC CTG ATCCAGGGCGTCAG       CTTCACCAAGGGCTG  51 351
        mltG NONE
 IUJ48_15310 3324276 .. 3324307 -  -2.2  -3.16564   CTGCCAGGGCAGGAA      CTGGGGCGCGCTC ATGGCCG GACCGC-CACCAG      TTCGCGCAGCCCGGC  42 5
        holB NONE
 IUJ48_15300 NONE
 IUJ48_15295 3321389 .. 3321404 - -11.8  -5.45652   ACGGCCAAGAAAAAA              CCCGCC ATCG GGCGGG               TTTGCAAGGAAGCGG 100 53
 IUJ48_15290 3320416 .. 3320427 -  -2.2  -3.30474   GGGGACAACGAGGAA                TCCG GGTA CGAA                 ATAGGTCAGTGCGCC  45 31
 IUJ48_15285 NONE
 IUJ48_15280 NONE
 IUJ48_15275 NONE
 IUJ48_15270 3317100 .. 3317141 - -23.7  -4.59773   CCGCAGGCGTAAAAA GGCCCGCAGTCACGCTCGC CCCG GCGGGCATGACGGCGGGCC  CGGGTGCGCGGCGGA 100 60
 IUJ48_15260 3313565 .. 3313582 - -14.1  -3.92659   GGCCCAAAATGGAAA             CCGCCCC TGTC GGGGCGG              TTTTCCTGTCTTCCT  88 84
 IUJ48_15225 3308213 .. 3308229 -  -9.4  -3.53343   AACGTGGCCTCGAAA              TGCGGC TTCAC GCCGCA              GTATTCGGGCCTGGA  61 513
 IUJ48_15210 3306274 .. 3306328 - -14.2  -2.60075   CGGCCTTGAAGCAAT GGCTGGTCGACGCCGCGGCCGACGCC TGAGC GGCGCCGGGC-CGG-GCCGACCGGCG TGTCATGGGGCGACG  70 28
 IUJ48_15200 NONE
        pdxA NONE
 IUJ48_15190 3301986 .. 3301998 -  -4.7  -4.36914   GCCTGGCGCAGAAAA                GCGCC ACC GCCGC                GCGCGAGATCAAGGA  69 457
 IUJ48_15170 3297242 .. 3297264 - -13.4  -3.14602   CCCACGTCAGCAACA           CCATGCGCGC GCT GCGCGAATGG           AAGGCCGGCCGCAAG  72 163
        arfB NONE
 IUJ48_15140 3293338 .. 3293363 -  -2.4  -2.87146   CTGGCTCATAACAAT         CCTCGTGCCCG GCGGG CGGGCTTG-GG         TAGCGGCGGCAGGCT  40 39
 IUJ48_15135 3291882 .. 3291898 -  -3.5  -3.53444   GCATGGGCGCCCAAA              TGGCCCG ACT CGGGCTG              GCTCTGGCTCGCCAA  49 400
 IUJ48_15125 3290256 .. 3290273 -  -3.3  -3.73534   GAATTGCATGAACAA             GCGCATC GAAC GTTGCAC              CATGGCCGCCGCGAT  55 509
 IUJ48_15070 NONE
 IUJ48_15065 3278639 .. 3278651 -  -3.3  -3.49475   TCGATTCTGACACAA                GCACG TAC CGTTC                CGGCGCTGCGGGCCC  49 105
 IUJ48_15060 3277922 .. 3277943 - -14.4  -3.36492   CCGCCAACCCGACAA           CGCCGCGC CGCAAT GCGCGGCG            TTGCCGCATTGCGCT  80 39
 IUJ48_15045 NONE
 IUJ48_15040 NONE
 IUJ48_15035 NONE
 IUJ48_15030 NONE
 IUJ48_15025 3270903 .. 3270919 -  -2.2  -3.53224   GATCGTCCTTCCAAA              CCGC TGATATCGC GCGG              GGTCTGACGCCCCTT  47 40
 IUJ48_15020 3269041 .. 3269061 - -18.3   -4.8622   TTTTGCAATGAAAAA            GCGCCACGG AAA CCGTGGCGC            TTCGAGATGGCGAAG 100 55
 IUJ48_15015 NONE
 IUJ48_15010 3267937 .. 3267957 -  -8.9  -3.89822   GACGCATTCCAGAAA            GCCGGCGAC ACC GTCATCGGC            AACGACGTCTGGATC  70 309
 IUJ48_14995 NONE
 IUJ48_14990 NONE
 IUJ48_14985 3264356 .. 3264380 -  -5.7  -3.24747   CTCCTACACCACCAA          CTGGGCGTT CCTGGAC AACGCCAAG          GCGACCGAGGTCAAC  50 249
 IUJ48_14975 3261970 .. 3261986 - -13.7  -2.73364   GCGTTACTGCAATTA              CGTCGCG CTG CGCGACG              GGCCGAAGGCGGCGG  67 145
 IUJ48_14965 3260759 .. 3260780 -  -2.9  -3.55548   GAAGACCCCGTCAAA           TGCTGGC GCGCGCAG GCCAGCC            GGCCGGTGTAGGCGC  49 104
 IUJ48_14955 3259276 .. 3259288 -  -3.3  -3.22653   ACGATTGCGAGAATA                CACCG GCG CCGTG                CCCGCTAGCGCTCCG  45 30
 IUJ48_14950 3257649 .. 3257676 -  -4.1  -3.18264   CGCCTGACCGAGGAA       CTGGTGGCGCTGG TGGG CC-GAGCCACC-G        CGCAGGCGCCGCTGA  45 386
 IUJ48_14915 3251936 .. 3251974 - -21.7  -3.05384   CGCGCCCCGACGGAA   CAACGGCCCGGCCGGCA TTGTG CGCCGGGCGGGCCGTCG   AGACGCCGGCTTTTG 100 81
 IUJ48_14910 NONE
 IUJ48_14905 3248043 .. 3248071 -  -3.1  -3.59979   GTCGGGCATGTGAAA       CGCGTCGGGTTC GGTGAT GAACCCG-CGTA        GCCTACCGGCGCGGC  51 50
 IUJ48_14900 NONE
 IUJ48_14895 3246761 .. 3246779 -  -8.8  -4.24342   CCGGCCAGGAAGAAA             CCGCGC ACGCGTA GCGCGG             GGGATATTAGCTCCC  77 32
 IUJ48_14880 NONE
 IUJ48_14875 3240598 .. 3240608 -  -2.4  -2.53346   CCAGAAACTCAAGAT                 TGGG ACT CCCG                 TCCATCGACGTGGTC  38 8
 IUJ48_14870 NONE
 IUJ48_14865 NONE
 IUJ48_14860 NONE
 IUJ48_14855 3237716 .. 3237728 -  -7.7  -2.88822   TGCTTGATACAACTA                TCCCA CGA TGGGA                CGACGGGGACATGTC  52 165
 IUJ48_14850 3237104 .. 3237116 -  -6.9  -3.53012   GGGGGCGCGGGGAAA                GGGCA TGA CGCCC                TCCCCTGGCCCTTCG  57 48
 IUJ48_14845 NONE
        tadA NONE
 IUJ48_14835 3234582 .. 3234603 - -18.7  -3.60098   AGCCCGGATGGCAAA           CCGCCCGGC GCGG GCCGGGCGG            TCGGAAAAACCAGGC  93 52
 IUJ48_14830 3232759 .. 3232814 -  -5.2  -2.79183   TTTACCCGGATGATA GCCCAGCAGGATTGCGGCAGGCTGAAC GCC GTCCAGCCCGCCGCCCTGGC-CCGGGA GTCAGGCCCGCCACC  45 92
 IUJ48_14825 3231482 .. 3231500 -  -5.9  -4.42386   CCTGGAGTTATAAAA             CAGCCAC TTCAG GCGGCCG             CCCCCGACCGGCTCG  73 15
 IUJ48_14820 3230538 .. 3230550 -  -3.3  -3.61103   GAATTTCATGGGAAA                GCTCC AGG GGATC                GAGGATGGCCGGCGC  51 82
 IUJ48_14815 NONE
 IUJ48_14810 NONE
 IUJ48_14805 NONE
 IUJ48_14800 3227253 .. 3227268 - -11.8  -3.35798   ACGCGTGATGCACAA              GGGCCC CTCG GGGCCC               TTGTCGCATGTCACG  73 36
 IUJ48_14785 3224860 .. 3224889 - -20.1  -4.18018   GCGCCCCATGCAAAA       CCGCCGCGCTTCCG GTC CGGAAG-GCGGCGG       TTTTTTCATGCCGGC 100 53
        tsaD 3222369 .. 3222384 - -11.8  -4.61873   CGGCACAAATGAAAA              GGGGGC CGCG GCCCCC               TTTTCATTGCCCGGC 100 41
        surE NONE
 IUJ48_14760 NONE
 IUJ48_14755 NONE
 IUJ48_14750 3218225 .. 3218243 - -13.8  -4.13767   TGCTGGACGTGAAAA             CGGGGCCC AGC GGACCCCG             TCTGTCGAGCCTGTC  93 61
 IUJ48_14745 3217400 .. 3217427 - -17.7  -5.30616   GCACGCAAAGAAAAA        CCCCGCCCCGC GGGCTG GCGGGACGGGG         TTGGCGGGCGCGGCC 100 99
 IUJ48_14740 3216301 .. 3216349 - -27.5  -5.00616   CGCCCCCGGAAAAAA GGGGGACTTGCCGGAGACGGCCC GCC GGGCAGTCTCCATCAAGCCCCCC AAAGCCGGCGCCGGT 100 64
 IUJ48_14735 3215244 .. 3215254 -  -3.2  -3.06515   CCGGACTCGGAAAAG                 GAAG ATG CCTC                 TGAGCTTAGGGATCG  43 100
 IUJ48_14730 3213996 .. 3214011 -  -3.2  -4.23758   ATTCGATACTCAAAA              CGTCAG ACAT CTCACG               CAGTCCAGAAAATTC  64 66
        rlmD 3212441 .. 3212462 - -13.7   -5.5112   CCCACTAAGAAAAAA           GGGCAAGCC AACC GGCCTGCCC            TTCTTGCATGCGGCC 100 63
 IUJ48_14710 3209329 .. 3209374 -  -6.8  -4.51812   TTTGACAATAACAAA CTCATCGCCGCCAGACGTTAT CTATC ATA-CGCCTGGCGGCGGCCCG CCCTTACACCGGCTG  79 29
 IUJ48_14705 3208453 .. 3208465 -  -9.1  -3.75153   CCGCGGCAAGGGAAA                GGGAC TGC GTCCC                CTTCCCGGCCAGCAT  71 40
 IUJ48_14700 3206799 .. 3206819 - -18.3  -5.26875   GCCGGAACGAAAAAA            GGGCTGCCC ACG GGGCAGCCC            TTTTGCATGGAGACG 100 45
 IUJ48_14680 3201030 .. 3201050 - -15.4  -3.77722   TGCAATGATGAATAA            CGCGGGCC TGGGC GGCCCGCG            CGCGACGCGGCAGGC  90 44
 IUJ48_14670 3199619 .. 3199636 - -12.7  -4.87893   AAGGCCAAGCAAAAA             CGCCACC TTCG GGTGGCG              TTTTCGTTTCAGGCT 100 82
 IUJ48_14650 NONE
        serB 3193851 .. 3193861 -  -2.4  -3.40403   TGGGGTCGATTACAA                 CGCC CAT GTCG                 ACCCGGATGTGAAGA  47 127
 IUJ48_14630 3190541 .. 3190564 -  -5.8  -4.07568   TGGCGCTGGGGAAAA          CACCTAGGCG CGCG CGCCGCGGCG           GATCATGATGCGCGC  66 96
 IUJ48_14625 NONE
 IUJ48_14620 NONE
 IUJ48_14615 3187201 .. 3187226 - -16.1  -3.98804   GTAAACGGGAAAGAA         TGGGCACGGCC GCGC GGCCGTGCCCG          AAGGGATACAGGGGC  95 40
 IUJ48_14610 3186426 .. 3186468 -  -3.8  -3.74693   CGTCACGGCATGAAA GTGTTGGACCGGCGCGCCCC AAC GGGGCGCGTCATGACAAATC AGGACGCCAGCCGGG  56 43
 IUJ48_14605 3185012 .. 3185041 -   -12  -3.54424   TGGGACGGCGGGAAA       GCGTGGGCCGCG ACGCAA CGCGGCCCCGGC        GCCGGTTCAAGCGGC  75 32
 IUJ48_14600 3183962 .. 3183986 -  -7.1  -2.87683   ACATGTTGCGATAGA          CCCCGATCAGA ATT CCTTATCAGGG          TTTTGCCGGATGGCG  49 20
 IUJ48_14595 3182746 .. 3182799 - -17.2  -2.57757   AAGCAATGCAATCCA CGGGGC-GCGCGGCCCCGGGCCCGG CGGAT CCGGGCCTGCGGCGGCCCCGTCCCG CCGGCATGCCGGCAG  83 299
 IUJ48_14590 NONE
 IUJ48_14585 NONE
 IUJ48_14580 NONE
 IUJ48_14575 NONE
 IUJ48_14570 3178095 .. 3178117 - -16.3  -4.62069   GCCGCATGTCAAAAA           GCCCGTCGC CTCGC GCGACGGGC           TTTTTTTTCGTCCAG 100 54
        nudC 3172750 .. 3172766 - -12.3  -5.09895   CAGGGACGGAAAAAA              TCCCTCG ATT CGAGGGA              ATACCCCTAGGATGA 100 77
 IUJ48_14540 3172088 .. 3172117 - -10.7  -3.78934   CCTCGGGTACAAGAA       GC-CGCCACGGC GCTGCCG GCCGCGGCGTGC       GGGTTGCGGTACGGG  74 61
 IUJ48_14535 3168279 .. 3168321 -  -9.3  -4.62069   CCCGGACGGCAAAAA CATGCTCGCCACCG-CGATCT TCG AGATCGGCGATAGCGAGG-TG ACGTTGCGAGTCCAT  88 147
        glnH 3162930 .. 3162988 - -12.3  -3.56092   GCATCATGGCGGAAA CGC-CCGGCGCCGCAAGCGGCTCGGGGC CGCCCC GTCCCGGGCC-CG-GCGTCGCCGGAGCG AAGCGCCGGGGCCCC  77 88
        glnP 3162224 .. 3162240 -  -5.1  -2.82602   CATGAAATTCAACCA              TGCTCAT AGT ATGCGCA              TCCTTTTTTCCACCA  45 12
        glnQ 3161128 .. 3161178 -  -6.4  -3.15663   ACGGACCTGCACGAA CGGTTGCAGGCCGGCGGCGTCGGC ACG GTGGTCGTCGCCGGCCTGATGACG CACGCCTGCGTGGCC  50 349
 IUJ48_14485 3159590 .. 3159607 -  -8.3  -3.74747   CGAATTGCGATCAAA             GGGGTGC TCCG GCGCCCC              TTTTTTCTTGCCCCA  67 103
 IUJ48_14455 3153373 .. 3153391 - -12.4   -4.7078   CGAATCACGCAAAAA             GGAGCGCA AAA CGCGCTCC             TTTTTGTTCAATGTG 100 117
 IUJ48_14445 NONE
 IUJ48_14440 3142614 .. 3142626 -  -4.7  -4.11216   CCGCGACGCGTAAAA                TGCCG CGG CGGCG                GGCGATCCCCCAGCG  64 464
 IUJ48_14420 3137280 .. 3137306 -  -7.1  -5.21709   CTTCAGAGCAAAAAA         GCCCCCGCGGA TTGTG CCCCCGGGCGC         CGTGGGATTTCCACG  93 135
 IUJ48_14415 3135429 .. 3135445 - -11.5   -3.9461   CGCGGGCAAGAAGAA              CGCCGGC AGC GCCGGCA              AGCGCCTGGACTTCC  77 251
         rph 3133658 .. 3133670 -  -4.7  -3.64822   ACGCCGCCACCGAAA                CCGAG CTG CGCGG                CCTGATCGACGCGAT  54 103
        rdgB NONE
 IUJ48_14375 3125496 .. 3125517 - -14.5  -4.08692   CAATTTGGTGCAAAA           GATGGGGCA TGAT TGCCCCATC            CTGGTGCCTGATTGC  95 40
        glnA 3123778 .. 3123835 -  -7.4  -3.56821   ACTACATGGGGGAAA TCGGCACGCCGGTCCGGCGGCGC-CCGC GAGC GCGGCGCCCTGCCCG-CCGGCGCGGGGC CGGACGGGCAAGCCT  63 125
 IUJ48_14365 NONE
        ntrC 3121128 .. 3121162 - -19.2  -2.62184   GTTTCCGCGAGAGGA     GGCCACGCGGGCGACG CAG CGCCGCCCGCGTGTTC     CAGGCAAATGTGCCC  89 40
 IUJ48_14350 3119263 .. 3119294 - -23.8  -4.19817   GCCACGCATCGAAAA      CAGGCCGGGCGGACC ATT GGTCCGCCCGGCC-G      CCGGCCGTCAGGCCA 100 33
 IUJ48_14345 3118025 .. 3118038 -  -5.9  -3.66018   CCAGCATGCCAACAA               GCGCA TCGC CGCGC                TGCTGATCGCGCATC  57 233
 IUJ48_14330 3114562 .. 3114609 -  -9.6  -2.79183   GTTATCCGCACGAGA TCTCCGGCGGCCAGCAGCAGCGC GTG GCGCTGGCGCGGGCC-CTGGCGC CCTCGCCCGACCTGC  56 450
 IUJ48_14310 3110141 .. 3110164 -   -16  -5.27335   CGCCGGAAACAAAAA          GCCCCGTCGC ATGT GCAACGGGGC           TTTTTTGCCACGAAG 100 54
 IUJ48_14290 3106253 .. 3106266 -  -8.1  -3.53224   TAGGGTTTTGCGAAA               GGCTC ATGC GAGCC                GACCCGAGCCTTCCA  60 77
 IUJ48_14285 3105805 .. 3105818 -  -2.3  -2.62184   GGTGGCGTTACAGGA               CCAGG ATGG CCTCG                ACCTCGAACTGGGCG  38 4
        recG NONE
 IUJ48_14275 3102572 .. 3102587 - -11.8  -2.58544   CGCGATTGCGACAAT              CCGGCC CAAA GGCCGG               CCGGCGCGAGGCGGC  64 69
 IUJ48_14270 3101946 .. 3101975 - -22.9  -4.72272   CGGCCGCATGAAAAA       GCCCCCGGGAACC GCAA GGTCCCCGGGGGC        TTGGCATGCCGCTGG 100 63
 IUJ48_14265 NONE
 IUJ48_14260 NONE
 IUJ48_14255 3095336 .. 3095348 -  -9.1  -3.55444   CCTTTATCTTCGAAA                CCAGG GGA CCTGG                AGGGGACCTGGGTAA  65 50
 IUJ48_14250 NONE
 IUJ48_14245 NONE
 IUJ48_14240 3091971 .. 3091989 -  -3.7  -2.65442   ACAGCACGTAGACCA             GCGCCAG GGCGA CCGGGGC             GACGACGATGAAGGC  41 120
 IUJ48_14235 NONE
        vexE 3088848 .. 3088884 -  -9.4  -2.62184   CGCCGCCGTACAGCA   TGGCCAGCGC-CGCCAGC CAG GCCAGCGCGCGC-GGCAA   CCGCTTGGACCAGCG  55 97
 IUJ48_14225 3087478 .. 3087488 -  -4.6  -3.25823   CGCCGGCCACATCAA                 CGCC GAC AGCG                 GCCTGGAAGACTGGC  49 222
 IUJ48_14215 3085496 .. 3085527 - -17.3  -4.18018   GCCGCCCACGCAAAA      GCCGGGCGGGAAG ACGCTG CTTCCGGCCCGGC       CGAAGGGTCTGGCGC 100 88
 IUJ48_14210 NONE
 IUJ48_14205 3083364 .. 3083400 -    -5  -3.55622   GTGAAGTTTGTTAAA   GGCGTGCCGGA-TGCCCC GCG GGGCCGCTCAGGC-CGCC   TTCCAGCTCACGATG  53 16
 IUJ48_14200 3082113 .. 3082135 - -17.7  -3.20349   TGGGGAAATCGAACA           CGCGCCGCG GCCAT CGCGGCGCG           GACCTACTCTTGCGC  91 29
 IUJ48_14195 3080678 .. 3080700 -  -3.2  -4.58283   GAAGTGTTCGAAAAA           CCCGCCTCGA CCT TCGTCGCCGG           CTTCATCGGCTCGCC  72 496
 IUJ48_14170 3075531 .. 3075542 -  -2.2  -3.54424   GCTCATGGGGGCAAA                GCGCG CAA CG-GC                GTGACTCACTTGCCG  47 31
 IUJ48_14165 3074829 .. 3074868 - -22.2  -3.61371   AAATCGCAGGGGAAA  TC-CGCGCCGCGCCTTGGA TTG CCCATGGCGCGGCGCGCGA  ATCGATGGCAGGTGA 100 154
 IUJ48_14155 3073317 .. 3073349 - -16.4  -2.60496   TCTTGCTCCAAATAG      TTCCGGCTCCGG TAGAGAGAC CCGGAGCCGGAA      ACCTGGGCGTATTTT  81 162
        livH NONE
 IUJ48_14145 NONE
        livG NONE
 IUJ48_14135 3069609 .. 3069631 - -11.2  -5.84432   GACAAGACAAAAAAA           GGGCGCCCCT TTC AGCAGCGCCC           AAATTTCCCTTCGCG 100 62
 IUJ48_14110 3064166 .. 3064199 - -10.9  -3.62522   GAAGGCCTGGAATAA     GCCCGC-CAGGCCGGC ATG ACCGGCCGGCGCGAAC     GCCCCGCCGCCCTTG  74 82
 IUJ48_14100 NONE
 IUJ48_14095 3061542 .. 3061593 - -13.6  -3.28712   GCGCGGTTCGCACAA GCGACG-CGCCAAGGCGTAGGCGTC CGG GACGCATTGGCCGCGGCGGCATCGC CGTGGCCAGGCGTGC  78 44
 IUJ48_14070 3056459 .. 3056476 -  -6.9  -4.60487   GACGAGGGCGAAAAA             CGCCTGG TGCA CCAGGCC              GGCCTGGAGGTGTTC  78 378
 IUJ48_14055 3054836 .. 3054866 - -13.3  -3.28712   CCTGGGGCGTGAGAA      GGC-GCGGCCAGTA TACG TGCTGGCCGCCGCC       GTGACTGCCAAGAAA  74 70
 IUJ48_14050 3053696 .. 3053717 -  -3.6  -3.53091   ACGCGGGTTTCGAAA           GCCTGGGGC TGGTC GCCGC-GGC           CGCCTTGGCCCTGGC  49 114
 IUJ48_14040 3051637 .. 3051657 -  -6.8   -3.4252   GGTCACCGACTACAA           CGCGGG-CG CATT CGACCCGCA            GCAGCGCAGCAATCC  55 405
 IUJ48_13995 3041269 .. 3041315 - -14.3  -3.61398   GCTGGGGTTCAAGAA CGGCACCGACGGCGGCGTGCAG ATCG CGGC-CGACGCCATCGTCGCCG CCAGCGCCAAGCATG  78 493
 IUJ48_13985 3038683 .. 3038741 -  -9.3  -3.36452   ACGCTGCAATACCAA TCCACGCCGGCGCTGCGCGAGGCGGCC TTCCT GACCGCCCTGGCCAGCAACGGCACCGA CTACCCGTTCCTGGC  59 504
 IUJ48_13970 3034749 .. 3034765 -  -7.9  -3.49951   CATACCGGCACACAA              GCCCGCG GCA CGCAAGC              CCGCCGGCTTGATCA  60 359
 IUJ48_13960 3033810 .. 3033824 -  -3.4  -3.07994   CGCAACCCTAGGTAA               CGCGGC ATT ACGGCG               ATATAGCAGGACCCA  43 50
 IUJ48_13955 NONE
 IUJ48_13950 3030142 .. 3030181 - -33.8  -3.53012   CTTGTCGTGTTGAAA  CGCCACGCGGGGAGCGAT CAGG ATCGCTCCCCGCGTGGCG   TCCAGGGCCGACACG 100 80
 IUJ48_13935 3025968 .. 3026000 - -17.1  -2.62263   AGCGGCGGGATACGA     GGCGGAAGGCG-GC CTCAGC GCGCGCCTTCCGCC      GGCGCCTCGCCGGGC  81 7
 IUJ48_13915 NONE
 IUJ48_13910 3023142 .. 3023159 - -12.7  -3.14468   GGCCAGGACACGGAA             CTGGGCC GGCC GGCCCAG              CCCGAGGAAATCTCG  68 159
 IUJ48_13895 3021274 .. 3021316 -  -9.7  -3.15996   GATCATCGAGGAATA CCTGGCGGG-GCGACTGCCGC CGC GCGCC-GCCGCGCCCGCGCGG CCGCGCGGCCTGAAT  60 104
 IUJ48_13885 3019598 .. 3019613 -  -6.8  -3.34398   GCTCTCCTGTAAATA              CGCTGCG GGT CGC-GCG              GCCGGGCGGTTCCCG  55 69
 IUJ48_13880 NONE
 IUJ48_13875 NONE
 IUJ48_13865 3016411 .. 3016434 -  -4.4  -3.73072   AATTCGTCGAGCAAA          CGCTGCTGGCC GCC GGCCGGCCG-G          TGCTGGTGGTGCCGT  55 473
 IUJ48_13850 3012465 .. 3012516 -  -6.4  -4.37886   GCAGTGGGCAGAAAA GGCGGCACGGCGCGCAG-GCGCGG GAAAGA CCGGACGCGGCGCGAC-TGCCGCG GCCTTATTGCGTGGT  75 29
 IUJ48_13845 3012043 .. 3012080 - -25.7  -3.28712   GGTGCTCGCGGACAA   GACGATGCCCGCGCAGC ACGG GTTGCGCGGGCATCGTC    ACGACTCGAGTGCGC 100 105
 IUJ48_13840 3010670 .. 3010689 -  -3.4   -3.4072   GACGGCCTACTACAA            CCAGACGC AGTG GCTGCTGG             GCGAAGGCCGCCGGG  49 71
 IUJ48_13800 3000747 .. 3000775 - -19.7  -3.28712   CCGTCGCCGTGAGAA        TACGGGAATGCCG CCA CGGCATTCCCGCA        GCGCGCGTGTAAACC 100 62
 IUJ48_13795 2999108 .. 2999121 -  -9.5  -3.72576   TCCGCCTGGACGAAA               GCCGC GACC GCGGC                ACCGGCGGCGCCGGC  71 220
        chrA 2996325 .. 2996370 -   -19  -3.28712   CGCCTTCCTGCAGAA GCGCGCGCCGC-GCTGGC-GCC AATA GGCTGCCAGCCGCCGCGGGCGC GCCACGGCGGGCGCG 100 86
 IUJ48_13770 NONE
 IUJ48_13760 2992156 .. 2992171 -  -4.6  -2.88243   GCCACAAGAACAGGA              TGCAGG CGGC CCTGCG               GCAATCCGGTTCGGC  45 126
        gspG NONE
        gspK 2988368 .. 2988389 -  -5.1  -2.73994   ATGGCGGCAACAGCA           CGCG-GATCG AGG CCATCACGCG           CCTTCCCGCGACCAG  44 19
 IUJ48_13735 NONE
 IUJ48_13730 NONE
 IUJ48_13725 NONE
        gspE NONE
        gspF 2983537 .. 2983574 -  -3.9  -3.33969   GAATGGACCCGAGAA   CGCATCCGGCGGCGCTC TGCA AAGACCGGCCTGACGCG    TTGGAGACATGTTGA  49 166
 IUJ48_13705 2980804 .. 2980821 -  -2.6  -3.54459   CGAACGCGCGGCAAA             TGGCCG CGACAC CGGCAA              TGATGTGTCCGCCAG  47 94
 IUJ48_13700 2968379 .. 2968391 -  -3.3  -2.78596   GACTGCGGCATGACA                GCGGA TCG TCAGC                TTTCCAGCTCCTAGC  40 36
 IUJ48_13695 2967544 .. 2967560 -  -2.2  -2.71011   ATCGCGGGGCAAGGA              TTGACG GCGCG CGTCAG              TACGCCGGGCAGCCC  38 22
 IUJ48_13690 2966987 .. 2967001 -  -3.5  -2.65815   TTGACATCCATAGGA               CGACT CTCGC AGCCG               GAACCCGCCTCATGG  40 35
 IUJ48_13685 2965911 .. 2965927 -  -9.3  -3.53811   GCCAGGCCGGGCAAA              GGCGTCG TCG CGGCGCC              TCAGGCCAGCACCAC  65 26
 IUJ48_13680 2965179 .. 2965198 -  -4.2  -2.91728   ACCCCTAAGACGACA            CGGCGCGGC GGA ACC-CGCCA            GGTTTTTTAATCAGG  44 32
 IUJ48_13675 NONE
 IUJ48_13670 NONE
        gspH NONE
        gspI NONE
 IUJ48_13655 2962217 .. 2962255 -  -8.1  -3.09933   GTTGAACGCATCGAA   CGCATCGAACGCATCGA ACATA TCGACCCGATCGATGCT   ACGCGGCCTGTGCGT  55 59
 IUJ48_13650 2961276 .. 2961290 - -11.4  -3.01712   CCGCCTGGCCGAAGA               CGGCTG GAA CAGCCG               CGACCCCGACAAGGT  62 428
 IUJ48_13635 2959718 .. 2959734 - -11.5  -3.32844   GCGCGGATGTGATAA              CCCGCCG GGG CGGCGGA              TTGTTTTTCGCATCG  70 424
 IUJ48_13625 2959379 .. 2959399 -   -14  -5.75342   GCCGCGCAAAAAAAA            CCGCGTCG GCAAG CGACGCGG            CGATGGGAATGCCGG 100 45
 IUJ48_13610 2955878 .. 2955912 -  -5.8   -3.4072   CAGCCTGCAGGAGAA    GATCGGCAA-GCTGA ACCTGG CCAGCATCACCGATC     CACTGACCGGCCTGC  55 486
 IUJ48_13595 NONE
 IUJ48_13590 2952281 .. 2952295 -  -8.5  -5.80364   AGGTCAACAAAAAAA               GCCGC TGGGC GCGGC               TTTGGTTCCGGAATG 100 43
 IUJ48_13585 2951453 .. 2951471 - -11.7  -3.05384   GCCTGGCCTACGCAA             CCGCCCT GGCCG AGGGCGG             ACCGCTCGATGCGGA  62 231
 IUJ48_13560 NONE
 IUJ48_13555 2946128 .. 2946160 - -15.5  -2.58579   GCAATTCCCCACAAG      CGCGGCGGCCCCG CGATGGC CGGGGGCGCCACG      ACGCCGAACGACACT  77 40
 IUJ48_13525 2939953 .. 2939965 -  -3.3  -2.56596   CCGTGTATGAATTTA                TCCGA ACT TCGGC                GGGCGCGGCGCGGCG  39 46
        ydiK 2938712 .. 2938751 -  -9.1  -3.08088   AAAGGCGGGAACAGA  CCGGCCCCGCG-CGGCGC TCTCG GCGCAGGCATGGGGCCTG  GCGCGGATGTTACGC  60 81
 IUJ48_13515 2937856 .. 2937884 -  -2.5  -3.80877   TTATTCGAGAAAACA        CTTTAAGTTATTC CAG AAATCACTTTAAG        TTGTCAGAAGCGCTC  53 29
 IUJ48_13510 NONE
 IUJ48_13505 2934961 .. 2934978 -  -2.5  -4.90869   ACCATCAATGAAAAA             CTGCGGC CGCG GCTGCTG              GAACTGGCGCCCGGC  79 409
 IUJ48_13440 2921408 .. 2921429 - -10.8   -3.6682   GGCGACGCATCCAAA           CGGCGGCC CGATGC GGCCGCCA            CAGGCAAGACTGCGT  71 41
 IUJ48_13430 NONE
 IUJ48_13425 2918515 .. 2918525 -  -2.4   -2.9732   GGGTAATCGAAATCA                 GGGC TGC GCCA                 GCAGCAGGTTGTCGC  41 12
 IUJ48_13420 NONE
 IUJ48_13415 NONE
 IUJ48_13410 NONE
 IUJ48_13405 NONE
 IUJ48_13400 NONE
 IUJ48_13395 NONE
        hpaH 2912687 .. 2912713 -  -4.3  -3.98857   GAACGAAAAAAGGAA        TGGCGC-GACGG GCTC CCGGCGGCGTCA         CACGAAGCGGCAGCT  60 23
 IUJ48_13385 2911412 .. 2911439 -  -4.6  -3.08327   ACGAAATGGCGAAGA        TGGCCGCCCGCG CCCA CACGGCCGGCGC         CACGGCGCTGCCGGC  46 215
 IUJ48_13365 2908621 .. 2908635 - -12.8  -3.61398   GGCGCGTCCCAACAA               GGCGCG CGG CGCGCC               GGCCGGCTCAGCGCA  81 33
 IUJ48_13325 NONE
 IUJ48_13320 2898214 .. 2898229 -  -4.6  -3.47349   TCTTCAAATCGATAA              GGCCTC GTCG GATGCC               CGATGCGGGCGGCGG  53 108
 IUJ48_13315 NONE
 IUJ48_13310 2896531 .. 2896553 -  -6.8  -3.95986   GCGAACGCAAGGAAA           CCGCCGCGGC GCT GTCGCACCGG           ATGCGGCAAGCCTCC  67 77
 IUJ48_13230 2879123 .. 2879151 - -11.6  -3.33815   ACGGCCTTCAACGAA        CCCGGGCGCACC TTCTG GGCGCGCCTGAG        CTTCAAGTACTGAGC  70 28
 IUJ48_13185 2869032 .. 2869063 -  -2.8  -4.57569   TCAGCGTTCCAAAAA      CAGGACGATAGCGCG GTC CGCGCGA-CGGCGCG      CTAGGGAAAGGCCAT  69 26
 IUJ48_13180 2868194 .. 2868229 -  -5.2  -3.13899   AAGCGCGCATGAATA    TTGTGCGCG-GCACGCC GAC GGCGGGCGCGGGCACGG    CGCCCGGGCCCGCGC  47 50
 IUJ48_13175 2865979 .. 2865991 -  -3.3   -4.0274   GTCATGACTAAATAA                CCAGG CCG CCCGA                TCAGCCGCCGCGGCG  58 26
 IUJ48_13170 2864317 .. 2864348 - -12.8  -3.51924   CGGTCAGGCAGACAA      CGGCGGGCGGGGTC AGGC GGCCGCGCGCGCCG       GCGCGGCCAGCTTGC  78 6
 IUJ48_13165 2863130 .. 2863173 -  -7.4  -3.66803   GGGCAATAGGGGAAA GCG-AGGACATGGCGGCGCT CCGGTC AGCGC-GCCGCGGCCTGCGC CGGGCCGGACACCGC  63 5
 IUJ48_13160 NONE
 IUJ48_13155 NONE
 IUJ48_13150 NONE
 IUJ48_13145 2859092 .. 2859125 - -13.7  -2.90723   TGAGCGGGAATGATA     TCGGCCCGGGGCCGG CTGC CCGACGCCGGGCCAT      GGACGCGGCCGTGGC  73 68
 IUJ48_13140 2858200 .. 2858244 -  -5.6  -2.65442   ACAGCAGGTACATCA TGGCG-CGCGGCCCGCCTGG TCGGATG CGCGGCGGGC-GCGGCGCGA GCCGGTTGCGTTGCG  45 50
 IUJ48_13135 2856682 .. 2856698 -  -2.1  -3.53224   GAGGGTGTCGTGAAA              GGCGTCT TGA AGGCGTC              TTGAAGGCCGTTCGC  47 52
 IUJ48_13115 2853927 .. 2853969 - -17.6  -4.07568   GGCTGGCCCCCAAAA GACCGCGGACCGTGCGGCGC CAG GCGCCGCACGGTCCGTTTTT TTTCCTGGCGGGAAG 100 42
        kdgD 2849010 .. 2849026 - -15.1   -4.4078   GTCTCCGAATGAAAA              CGCCCCC AGC GGGGGCG              GGCAGGCGGCGCCGC 100 48
 IUJ48_13090 2847077 .. 2847090 -  -9.5  -3.02461   CAATTCGCTGCAATA               CGCCG GACC CGGCG                CGCGCGTCACGATCA  59 344
 IUJ48_13075 2843978 .. 2843991 -  -3.7  -3.05844   GTCTGCATGGGAAGA               GCCGG TCAA CGGGC                GGCGGGCGCGGTCCA  45 17
 IUJ48_13070 NONE
         azu NONE
 IUJ48_13060 2841380 .. 2841410 -  -3.8  -3.14132   GGGCGCGCTGATGAA       GTTCCTGACCGCCA TGG CGCCGAACTGGAAC       ATCAGCCTGTTCCAC  45 190
 IUJ48_13045 2835521 .. 2835548 -   -17  -5.47159   CGGAACAAAGAAAAA        GCCGACGGCTCC TTGC GGAACCGCCGGC         TTTTTTTGCGCCACC 100 67
 IUJ48_13025 NONE
 IUJ48_13020 NONE
 IUJ48_13015 NONE
 IUJ48_13010 NONE
 IUJ48_13005 NONE
 IUJ48_13000 2825897 .. 2825932 -    -9  -3.36452   ACGCCGCAAGAGCAA    TGGGCGCC-GCCGTA AGCCGTG CACGGCCGGCGCTCA    GTTCAGTTCGCTGGG  60 23
 IUJ48_12995 2824509 .. 2824536 -  -5.5  -4.24606   AATGCATATGGAAAA       CGC-CGCC-GGGC TGCT GCGCTGGCGCGCG        CATGTGCCCGCACCA  70 59
 IUJ48_12990 NONE
 IUJ48_12985 2820955 .. 2820979 -  -9.2  -3.13522   AGGCCGCCAGCAACA         GGGGCGC-CCG TAGC CGGCGCGCGCC          TTGGAGCGGCTGGTC  60 76
 IUJ48_12980 2819977 .. 2820010 -  -5.8   -3.1211   GACGAGATGACGGAA     TGCGCGCGATGCTT CATGCC AGGCTCCGCGCGCG      CTTGCGCAAGGCGGC  49 5
 IUJ48_12975 NONE
 IUJ48_12970 2817925 .. 2817976 - -10.8  -3.76224   TGGTGACCCACGAAA TGGGCTTCGCCCGCGAAG-TGGCGC ACC GCGTCATCTTCATGGACGAAGGCCG CATCGTCGAAGAGGC  74 184
 IUJ48_12945 2813017 .. 2813030 -  -3.1  -3.14132   GTGGCGGTGGAGCAA               GCCGAG CTG CT-GGC               GTGGACGCGCGTGTC  43 294
 IUJ48_12920 NONE
 IUJ48_12915 2806327 .. 2806342 -  -8.2  -2.96274   TGGCGCACAAGCACA              CGCCCG AAAT CGAGCG               CCACGCCGGTCTGTC  53 483
 IUJ48_12905 2804630 .. 2804660 -  -3.1  -3.72576   GCCTGCGCGAGGAAA      GCGAGCGCGCGGCA TTCC TGCGGCGGGCGC-C       ATCTTCCGGAGCCTG  54 115
 IUJ48_12895 2802334 .. 2802347 -  -3.7  -4.35604   GCAAGTGATAAGAAA               CGCGG GAAT CAGCG                GTCGGCGGGATCGTC  69 20
 IUJ48_12890 2801011 .. 2801023 -  -4.7  -2.71731   TTCACGCTGGAATTA                TGCCC TGC GGGCC                GCCCGCCCCGGAATC  44 71
 IUJ48_12885 NONE
 IUJ48_12880 NONE
 IUJ48_12875 2797853 .. 2797869 -  -3.6  -3.35813   CGTTACCCGAACCAA              CCGCTC CTCCT GAGGGG              CAATCGGCGCCGCCC  47 495
 IUJ48_12860 2794091 .. 2794126 -  -8.2  -3.48053   TAGATAGGAACAAGA    CTGGCCAGCTCATCCCA ATG CGGGTTGAGC-AGCCTG    ATGTCGCCGTATTCG  62 74
 IUJ48_12785 2778519 .. 2778529 -  -8.2  -3.29511   TGGAGGCGGCCAGAA                 GGGC CAC GCCC                 GCTGAGTTGGAAGCC  59 496
 IUJ48_12775 2777146 .. 2777161 -  -2.6  -4.40572   ATAATGTCGACAAAA              CAAATGC CGC GCATT-G              CGAGATAATCGATTC  65 76
 IUJ48_12770 2775362 .. 2775404 - -21.3  -4.07568   GGCGGCGGGGCAAAA GCGACGGGGCAGG-CCGGCG CAAT CGCCGGGCCTGCCCCGTTTC GGGTGCGTCGCCGTA 100 41
 IUJ48_12760 2773776 .. 2773801 -  -4.6  -3.53012   TTTGCGGCCGCGAAA         CCGCG-GCTGG CAAGC CCCGCACGCAG         GGGCCATGGCCAACA  53 86
 IUJ48_12755 2772842 .. 2772858 - -13.7  -3.03771   GGACAGCGCCGAATA              CCGCGAG CTG CTCGCGG              CCAACGGCTTCGAGG  69 135
 IUJ48_12745 2770835 .. 2770861 - -10.1  -3.73224   TGATGTTTCATGAAA        CGCC-GCGCGTC AAGC GATGCGCCGGCG         TGATGCGGGGTCAGG  74 36
 IUJ48_12740 2769880 .. 2769898 -  -5.2   -2.6155   CGTCGCAATATGAAT             TCGTGCCG TCG CTGCACAA             GGCGGTGAACGTGCC  42 229
 IUJ48_12725 2767313 .. 2767351 - -12.4  -2.70932   CGTGTGCTTGAATTA   TTTTTCCGCGCGCCGA TGCGTGG CCGGCGCGCGGGAACA   ACCGTGGGGCAGGGC  65 44
 IUJ48_12720 2766228 .. 2766257 - -21.5  -4.66609   CAGCCGACGCAAAAA       CGCCGGCCG-GGGA AAC TCCCTCGGCCGGCG       CGCAGCGGGCGCGTG 100 69
 IUJ48_12710 NONE
 IUJ48_12705 2763153 .. 2763167 -  -2.8  -4.12198   CAGAAGCGCGCAAAA               GACG GACCGAT CGTC               CTTTGACCGCGCGGA  60 175
 IUJ48_12685 2758175 .. 2758204 -  -7.8  -3.16742   GGCAACTGGCACGAA       CTGGCCGCCACAC CCGAC GTGCGG-GGCCGG       CCCACCTGGATCGGG  53 265
 IUJ48_12675 2755924 .. 2755961 -  -8.3  -3.02144   CCATCGTGCTGAATA   CGGCC-GCAGGCGTGCAG CAG CTGGACGCGCGCTGGCTG   CAGCTGGCGCAAAGC  55 394
 IUJ48_12645 2750297 .. 2750307 -  -8.2  -3.18681   GTCCAAGGCCACCAA                 CGGC CTG GCCG                 TGCCGATCCCCGAGC  56 367
 IUJ48_12625 2746082 .. 2746114 - -20.5  -4.56597   GCGGCTTCTCAAAAA      GCGCGCAGGCGGGCC GTC GGCCCGCCTGCCGGC      AGCGCGTGCGTGAAG 100 43
 IUJ48_12620 2743781 .. 2743810 -  -3.3  -3.63515   GTTGATCGTCAAGAA       CTGGCTGGATGCG GCGC CGCGTCCGGCGTG        GCTGGAACGGCTGGG  51 98
 IUJ48_12540 2724287 .. 2724328 - -13.6  -3.14881   GAAGTGGCCGAGGAA CGCGAG-GCCGAGGCGGCC GACAG GGCTGCCTCGGCGCAGGCG CCGGCAGACGAACCG  72 444
 IUJ48_12525 NONE
 IUJ48_12520 NONE
 IUJ48_12515 NONE
 IUJ48_12510 2713990 .. 2714001 -  -5.8  -3.61764   TCAGCAATCCCGAAA                TGCG CCAG CGCA                 GCATCCAGGTCGTGA  57 181
 IUJ48_12500 NONE
 IUJ48_12495 2710444 .. 2710478 -  -3.5  -4.28994   CAGCAGCCAGGAAAA    CCACAGGCCGAC-CCA GGTG TGGAGCCAGGCCATGG     ACAAACGGAAACTGG  64 209
 IUJ48_12490 NONE
 IUJ48_12485 2708483 .. 2708499 - -10.8  -3.53811   TTGATGCCGGTCAAA              CGGCCC CGGCC GGGCCG              GCGCGGACGCAATGC  69 45
 IUJ48_12480 2706334 .. 2706354 -  -9.6  -2.71712   GCTCCTTGGGGAAAG            GCCGGGCG GGGAT CGCCCGGG            GAAAAAAGCGGTCGA  56 50
 IUJ48_12475 NONE
 IUJ48_12470 2705064 .. 2705112 -  -4.4  -3.21416   GACGGCCACTACGAA CGCCATCTGGTGCGCCTGCGCCAG CGG CTGGAGGCGGC-CACCGG-CGACG CGCTGCGGGTGCTGG  45 288
 IUJ48_12460 NONE
 IUJ48_12455 2701947 .. 2701963 -  -2.2  -3.23853   TCTGTTCAAGCAACA              CGGGAT CGCTC ATGCCG              GCACCTCTTCACGCA  44 18
 IUJ48_12450 2700531 .. 2700556 - -17.6  -5.46698   CGCAAAAGCAAAAAA         GGGGCGGAGC ACGGCG GCTCCGCCCC          TTGCCGCCGGTGAAT 100 40
 IUJ48_12445 2699149 .. 2699186 -  -6.5  -3.53563   ACATGGGGCGGGAAA   TTATTGAACGAAAAATA AGAT TATACGTCGTTCAATAA    TTTTCCCGGCCCCGT  57 69
 IUJ48_12440 2698380 .. 2698414 -  -2.8  -3.21099   CGCCGCCAGCACGAA    GCCCGGCGGCACC GGAACCCCGA GGTGC-GCCATGC     GCGCCAACTGCCAGC  45 107
 IUJ48_12435 2695527 .. 2695545 -  -2.3  -3.22298   GCCATCGACCAGGAA            CTGC-CGC CGGT GCGCGCCG             ACCTGGGCATGATCG  43 382
 IUJ48_12420 NONE
 IUJ48_12415 NONE
 IUJ48_12410 NONE
        msrB 2691061 .. 2691082 -  -2.8  -5.75945   ATCCTCGAAAAAAAA           GGCGGCCC AGGTCA GGCCCGCG            GGGTGAAGCTCAAGG 100 15
        msrA 2690038 .. 2690050 -  -2.7   -4.0613   TGCAAAATAAAAAAT                TATCC CCG AGATA                CCATCCAAATCGAGG  57 326
 IUJ48_12395 2686946 .. 2686974 -    -6  -3.08133   GATGCATGGATTCAA       GGCCGCG-GCAGTC ATG GA-TGCCCGCGGCA       CCCCCGCACTGTAGC  49 129
 IUJ48_12390 2686191 .. 2686227 -  -2.7   -3.9644   GCGCGAAGACAACAA    GACCCTGGCGGCCACGC TGC GCGAGGCCCACAACGTT    ACCGACGAACATCGC  58 212
 IUJ48_12380 2684291 .. 2684309 -  -2.2  -2.78384   CCGCGCGCCAGGATA             GCAGGGCC TGG GTCCGCGC             CGGCGATCCTGGCGG  38 47
 IUJ48_12375 2683359 .. 2683406 -  -5.4  -3.28712   CGCGTGGTTCGAGAA GCTCGCCGCGCGGGGCTTCAT CCGCATC AGGCAGCCGCGCGAGACG-GC CGGCCTGCTGCTGGC  49 191
 IUJ48_12365 NONE
 IUJ48_12360 2680486 .. 2680507 -  -7.1  -3.14132   CGGCTGGCCGAGGAA           CGCGAGCGG ACCA CCGCGCGCC            TGGCAGCCCTGGGCA  53 328
 IUJ48_12350 2678234 .. 2678255 - -14.4  -4.18018   GGCCGCCATGCAAAA           GGCGCCGG CTTTGT CCGGCGCC            TTTTTCTTTGGCCAA  93 155
 IUJ48_12335 NONE
 IUJ48_12330 NONE
        folE 2672802 .. 2672822 - -19.7  -5.24129   CGCGCCGACAAAAAA            GCCGGCCCC GGA GGGGCCGGC            CATTCCCGGGCGGCG 100 52
 IUJ48_12315 2670822 .. 2670842 -  -3.9  -4.08394   AGAGCGGGCGGAAAA            GGGTGCG AGCCGGG CGGACCC            TTGCCGGCAGGTCTC  62 69
        tauA NONE
 IUJ48_12305 NONE
 IUJ48_12300 2667328 .. 2667354 -  -2.1  -4.65747   GAATTCTCAAGAAAA         TCGGCAGCAAG AACGG CGTGCGGCTGA         TGTTTCTCCTCGGGT  71 518
 IUJ48_12275 2661008 .. 2661047 - -23.8  -3.32022   GTGGGGATACAGCAA  GCGCGCAAGCAGGATTTCC AAG GGAA-TCCCGCTTGCGCGC  GCTTGCTGAAATCTG 100 113
 IUJ48_12270 NONE
 IUJ48_12265 NONE
 IUJ48_12260 2653393 .. 2653407 -  -8.6  -2.80935   ACGTCAGCCACGACA               TGATGC CGC GCATCA               CCCAGCCGGATCCGG  52 326
 IUJ48_12205 NONE
        dbpA 2638541 .. 2638556 -  -2.6  -4.81083   GGGAATGAGCAAAAA              CGGACTA TTT TAGTC-G              TTACAGCTCCTCGAG  74 26
        queE NONE
        queD 2637156 .. 2637170 -  -4.2  -4.30416   ACTATTAATTGAAAA               TGGCGA AGA TCTCCA               TTGATTTTTTCAATC  66 281
 IUJ48_12185 NONE
 IUJ48_12180 NONE
 IUJ48_12175 NONE
 IUJ48_12170 2633449 .. 2633476 -  -5.5  -3.53012   GGCGGGTTGGTGAAA        GCGCGCGCTCAA GAGGG CTG-GCGCGCGT        CGGTCCGCGTCTGCG  55 6
 IUJ48_12165 2631801 .. 2631841 - -10.1  -3.53811   CCGACGCGGGGCAAA  GGCGCGTGGCACGGCCGCG CAT CGCGGGCGCGGCGCGATCC  ATGCGAAGGAGGGAG  69 164
 IUJ48_12160 NONE
 IUJ48_12155 NONE
 IUJ48_12150 NONE
 IUJ48_12145 2627133 .. 2627160 -  -8.2  -3.05384   CGCGCCGCCACGGAA        CTGGGCGCGGAG CTGG CGCCGCGTCCGG         CCTGACGCGCGGCGC  57 61
 IUJ48_12130 2623753 .. 2623764 -  -7.2  -3.18024   GGCTACTACGAAAAC                GCCG ATCG CGGC                 CTGGTGGGGTTCGCG  53 187
        imuA 2621532 .. 2621578 -  -7.6  -3.38812   GCCCGCGGAAGAACA GCAGGCTGGCGCCGACGTTGAG CAG CACGGTGTCGTCGCCCGCCAGC GCGACCTCGGGGTGT  58 232
 IUJ48_12110 2617014 .. 2617024 -    -4  -4.58663   ATCACTCCTGAAAAA                 GAAA ACG TTTC                 CACGGCGCGGCCGGC  71 153
 IUJ48_12105 2616562 .. 2616595 -  -2.3  -5.00616   GCCGTCTGGAAAAAA    GCGGGCGC--GGGGC GGGTGT GCCCGTTGCGCCCGT     CGCGCCGTGAATGGC  79 47
 IUJ48_12100 2614862 .. 2614888 -  -6.5  -3.04792   GCAGCATCCGCAAGA        CCTGCGCCAGCA CCCG TGCCTGCGC-GG         CCGTTTTACCAGCGG  48 423
 IUJ48_12090 NONE
 IUJ48_12085 2612588 .. 2612598 -  -2.4  -3.34895   TTTATTTGCAACTAA                 GCGG GGG CGGC                 GCGAGGTCAACCGAC  45 32
 IUJ48_12080 NONE
 IUJ48_12075 2609891 .. 2609912 - -12.3  -3.30124   CGGGATTGCCGATAA           GGCGCG-TCG CAG CGAACGCGCC           GCCGGCTATCCTTTC  73 39
 IUJ48_12070 2608646 .. 2608660 -  -4.2  -3.05596   GAGCTGCGGACGGAA               GTCCTT GCG AGGGAC               ATGCCGATGGTGGTG  45 419
 IUJ48_12060 2606687 .. 2606705 -  -3.1  -4.15044   GCCTGGCGTAATAAA             GAGCC GGCGCCATT GGCTC             TCGTGCGGTGGCTTC  60 91
 IUJ48_12010 2596687 .. 2596698 -  -3.6  -4.15044   TTTCGGGCCAACAAA                GACG CTAC CGCC                 GGACCCGGCGCCGAT  60 18
 IUJ48_11995 2593729 .. 2593756 -    -4  -4.97824   AAAAGGGAAAGAAAA        GGGCATAGCGCG TTCA CGCGCTATCAGC         ATCCACGACGTCGCA  82 284
 IUJ48_11980 2589745 .. 2589757 - -10.5  -3.15544   CGCGATTTCCATCAA                CGCCG CGG CGGCG                GTCGCGACCTTGCCG  60 335
 IUJ48_11920 NONE
 IUJ48_11915 2576769 .. 2576790 -  -7.9  -4.39407   GTAAAGAACTCAAAA           GACGTGGCG CGGC CGCGACGCC            TCAATGGCCGGCCGG  78 26
 IUJ48_11910 2575277 .. 2575306 -  -7.1   -2.7566   ATTCAAGCTCAAGCA       GGGCTTTCGCGCGC TAT ACG-GCAACAGCCC       GATGCGGCTGCTGAC  49 237
 IUJ48_11900 2572264 .. 2572281 -    -4  -3.78775   GTGTTGACGATCAAA             GGCGCC AGGTCA GGCGCA              GGCCCACTTCGCGCG  56 3
 IUJ48_11895 NONE
 IUJ48_11890 2569559 .. 2569577 -  -8.1  -3.14132   CCTGGCGTCGATGAA            CCGGCTCG AACG CG-GCCGG             GTGCTGGCGCGCCTG  53 352
 IUJ48_11880 NONE
 IUJ48_11875 2565376 .. 2565420 -    -7  -2.72344   GCTCACCGGCAAGTA CCA-GCCGGGC-CAGGCGCCCG CCG CCGACACCCGCGCCGGGCGCGG CGACCGCCGCATCCT  49 389
 IUJ48_11860 2562210 .. 2562253 - -10.8  -2.87344   CATGGGCGTGATAGA GCGCTTTGCGCGCCGCGG TCCCGACG CCGAGGAGCGCGAGGCGC TGGCCGAATTCATCA  61 160
 IUJ48_11850 2561046 .. 2561065 -  -8.5  -2.54523   CGATACCGTAATGTA            CCGCCGC CGCCAC GCGGCAG             GTGTGTCAAGATTTA  53 59
 IUJ48_11845 2560206 .. 2560227 -  -5.7  -3.35813   TGGGACTTCAACGAA           CTGGGCCGC TATT ACGACCCGG            TCGACCAGGTGGTCT  52 249
 IUJ48_11825 2558059 .. 2558085 - -10.7  -3.63515   GCCGATCCCGAATAA         GCCGCCCGCGC GGCAG GCGTGGCCGGC         ATGGCGATGTGTCCT  71 143
 IUJ48_11815 2555768 .. 2555782 -  -2.7  -3.57309   GAAAACGGGGCGAAA               GGGGC GGTAA GCGCC               GGCTTGAACCGGCGT  50 85
 IUJ48_11810 NONE
 IUJ48_11805 2553768 .. 2553781 -  -3.7  -5.07652   GCGGTCAAAACAAAA               CCGGC CGCG GCTGG                TTCGGGGTAGACGCT  82 47
 IUJ48_11800 NONE
 IUJ48_11795 2552979 .. 2552991 -  -3.4  -2.66216   CTCGACGATGAGAAG                CATG TACGG CATG                GACGGTTCCTGGTGG  40 133
 IUJ48_11790 2552591 .. 2552636 -  -6.1  -3.63895   GCGAATCAGGGTAAA CACCTAGTCCGGCCGCCACGC CAGCCC GCGCGGCAGC-G-ACCCGGCG CTACATGAAACAGGG  57 26
 IUJ48_11785 NONE
 IUJ48_11780 NONE
 IUJ48_11775 2550335 .. 2550355 - -13.9  -3.14132   CGGCGGGGGCATCAA            GGCGCGCGC ATG GCCCGCGCC            CGCGCCAGCAGCATT  76 1
 IUJ48_11770 NONE
 IUJ48_11765 NONE
 IUJ48_11760 2547611 .. 2547649 -  -8.8  -2.78384   TGGTGGTCGAGGACA  GCGTGCCCGGCGTGCGCG CCGCC CGCGC-CGC-GCGCATGC  GGGCGGTGGGCTACA  52 193
 IUJ48_11745 2544686 .. 2544731 -   -11   -2.8474   TGGCATCCAGAACGA CGTGCGCGCCGGCATGGGCGT GAGCT ACGCGCA-GCCGCCGCGCGCC TGAGGCGAAGCCGCC  64 99
        gstA 2541642 .. 2541698 -   -15  -3.05384   GTCGCGGCGACGCAA CGCATCTGCCAGCGG-GCGCTGCGCACC ATC GGGGCGTAGCGCGCCGCAGGCCG-CGCA GGCCACGCGGCTATC  80 71
 IUJ48_11710 NONE
 IUJ48_11705 2538881 .. 2538891 -  -6.8  -3.57462   TAGGGTACCCGCAAA                 GGCA TGC TGCC                 GTGACGGTAGAGGCG  59 63
 IUJ48_11700 NONE
 IUJ48_11690 2535293 .. 2535313 -  -5.3  -3.17229   ACGCTACGAGGAAGA            CCTGCGC CGCGTGC GCGCCGG            CAAGCTGGGGCACTA  47 162
 IUJ48_11655 NONE
 IUJ48_11650 2521684 .. 2521708 -   -20  -4.08557   CGCGGCAAAGAAGAA          CGCCCGCCGG GGATG CCGGCGGGCG          TTGCGGAGTGGCGAA 100 43
 IUJ48_11645 2520582 .. 2520600 -    -3  -2.95774   GATATTGATCAGATA             CTTGGACA TAG TGTCCCGG             TTAGCTGGCGCGAAG  42 26
 IUJ48_11640 NONE
 IUJ48_11635 NONE
 IUJ48_11630 2515494 .. 2515508 -  -2.7  -3.74526   GCATCAACCCAACAA               TCGCG AGATG CGCGG               GGTGGTGCGCTACGA  53 419
        tssJ 2494832 .. 2494846 -    -7  -3.01791   ACGTTGCGGTGAACA               CGCGCG GCT CGCGCC               GGAATCAGTTCGGGC  50 30
        tssK NONE
 IUJ48_11540 NONE
 IUJ48_11535 NONE
 IUJ48_11530 2486350 .. 2486393 - -10.2  -2.73468   GAACATGCGCAACGA GCTCATCACCCGCGGTG-GCG GCA CGCTCACCGAGGCAGACAAGC CCAAGGATCCGTTCG  56 396
 IUJ48_11500 2477834 .. 2477844 -    -4  -3.02511   GGTAGCGGCGCAAGA                 TGAT CGG ATCA                 TTGCGCGGCCCCCGT  44 23
 IUJ48_11495 NONE
        tssM NONE
        tagF NONE
 IUJ48_11480 2470677 .. 2470716 -   -13  -3.59247   GAACAACGGCTGAAA GCGGGGCCCGGCGATGGCC GCAAG GGCCATCGC-GG-CCC-GC GGCATTGGGCGCGCG  81 73
 IUJ48_11470 2469144 .. 2469159 -    -6  -2.99471   TTATGCTTACAGATA              GGTGCC GTCC GGCGCC               ATGCGGGGCGTGCCC  48 1
 IUJ48_11460 NONE
         map 2466741 .. 2466774 -  -9.6  -3.61398   GCGGGGCCGCAAGAA    CG-GCAAGGGCCCGAT CATG ACCGGGCCCC-GCGCG     TGTCGCACTCCGTTA  68 64
 IUJ48_11450 NONE
 IUJ48_11445 2464404 .. 2464417 -  -9.5  -3.53779   TCCGCAAAACACCAA               GGCCC ACAA GGGCC                CGCTGGCCACCGATG  67 288
         eno NONE
 IUJ48_11420 2459623 .. 2459637 -  -5.6  -3.16944   AGGATCAACGCAACA               TCGGCA GGC TGCCGG               TCAGGGCATTGACCC  49 0
 IUJ48_11395 NONE
 IUJ48_11390 NONE
 IUJ48_11385 NONE
 IUJ48_11380 NONE
 IUJ48_11375 NONE
 IUJ48_11370 2446615 .. 2446646 - -24.4   -4.4078   GCGTTCCAATGAAAA      GCGGGCCGGTCGCC GCAA GGCGTCCGGCCCGC       CCGGGGCGAAGCAGG 100 46
 IUJ48_11360 2444565 .. 2444580 -  -4.6  -3.53012   TTGCGCGCGGTCAAA              CCGCCA CGCG TGGCGC               CGCGTCAGCTCAACA  53 30
 IUJ48_11355 2443907 .. 2443952 -  -2.5  -3.18582   GATCGCATGGAGCAA CTGCTGCATCCGGCGGCCT-GA GCAGG TCGAGGCGGCCGG--GCGGCCG GCGCCGGCCGCTGCC  44 78
 IUJ48_11345 2441255 .. 2441265 -  -5.4  -2.53876   GCCTATCCGAAGCCA                 TACC CTG GGTA                 CGATGATCTATCTCA  43 128
 IUJ48_11340 2440684 .. 2440717 - -15.9  -3.30243   ACTGATCCGTCAGAA     GGGCGGCGCGCATCC GGGA GGACGCGTGCCGCTC      GCACGCCGGAAGCGC  88 78
 IUJ48_11315 NONE
 IUJ48_11310 NONE
 IUJ48_11305 NONE
 IUJ48_11300 2428843 .. 2428855 -  -6.9  -3.14132   GGTGCTGCGCATGAA                GCAGG CCG CCCGC                AGCGCCACCCGCGTG  50 449
 IUJ48_11290 NONE
 IUJ48_11285 NONE
 IUJ48_11280 NONE
 IUJ48_11275 NONE
 IUJ48_11270 2422395 .. 2422407 -  -4.7  -3.85698   CTGGCCGCCGAGAAA                CTGCG GCG CGCGG                TCGAGGCCATGCAGA  60 283
 IUJ48_11210 2407155 .. 2407213 -  -4.3  -2.74523   GCAGCGCGAATAGTA GGGCGCGGCGGCGCAGGGGCGGATTG ATCTGGCG CAAACCGCTGCCGGTCCGC-GCGCGC CGGCGTCCGGATCAC  42 52
 IUJ48_11205 2406270 .. 2406282 - -10.5  -3.76224   CGGGCATGGACGAAA                GCGGC CGC GCCGC                CTTCCTGGCGCGATT  71 453
 IUJ48_11185 NONE
 IUJ48_11180 2400918 .. 2400930 -  -7.7  -4.08692   CAAGGCGCTGGAAAA                CGTCA CCC TGACG                AATCCACGCACGGGC  69 121
 IUJ48_11170 NONE
 IUJ48_11165 NONE
 IUJ48_11160 2398130 .. 2398150 -  -5.4  -3.61715   GACGTTCCTGAACAA           CTGCG-CGG CCTG CCACCGCAG            CACAGGCAAGGGCTA  54 512
 IUJ48_11140 2393344 .. 2393371 -    -7  -3.38991   AGGCGGCCAACAATA        CCGCCATC-ATGG GCG CCATCGACGCCGG        CCAACGCGGGTTGGT  55 363
 IUJ48_11130 2390783 .. 2390806 -  -2.2  -3.16683   ATGGCACCCTACGAA          TGGCTCGTGC GGGA GCGCGTGGCA           GCAGCCCGTGAAATG  43 324
 IUJ48_11120 2388967 .. 2388992 - -10.3  -2.70932   CGCCTTCGGCAAGGA         CGCGCGCCTGG CTGG CAATGCGCGCG          CGGCGGGGCGGGCGG  56 504
 IUJ48_11110 2387355 .. 2387389 -    -5  -3.72576   TGTCGGCCGAGGAAA    CCCGGCGCTG--GAAG CAGAT CATCGACAGCGCCAGG    ATCCAGCTGGATTGA  58 80
 IUJ48_11095 NONE
 IUJ48_11085 2381372 .. 2381388 -  -9.4  -3.14132   GCTGGCCCGTAGCAA              GGCCCA ACTGA TGGGCC              TGATGCGGGATGTCG  56 153
 IUJ48_11050 2374987 .. 2375013 -  -6.5  -2.62933   GAATGCGGCAGATCA        TCGACGCCATGC CCCT GC-TGGCGCCGG         ACCTGCGTGGTTCGC  45 175
 IUJ48_11040 2373127 .. 2373137 -  -2.4  -3.57561   CCGCAACTGCGCAAA                 CAGC GCG GCGG                 GCATGTCTTCAACGT  50 504
 IUJ48_11030 2371374 .. 2371387 -  -5.9  -3.57144   GGCCGCATGGCGAAA               GCGGC CAAT ACCGC                GTACGACGCCGCCCG  57 259
 IUJ48_10995 2366614 .. 2366629 -  -6.8  -3.61398   GCTGGCGCCGAATAA              GCACGG GCGG CCATGC               CCGACCTCGGTCACC  59 46
 IUJ48_10990 2365057 .. 2365081 -  -5.6  -3.01712   GCGCGGCCTCGAACA         CCCCGTGCGCG TGGG CGTGC-CGGGA          CCCGCCGGTATCGCG  46 471
        msuE 2362664 .. 2362678 -  -4.2  -4.67038   TGCGGAAAACGAAAA               GCCG GTTCGGG CGGC               CGCAAGGCGGGAGAA  75 132
 IUJ48_10970 NONE
 IUJ48_10965 NONE
 IUJ48_10960 2359520 .. 2359532 -  -3.3  -3.04715   GATGTCTTGCAAAAC                TGCCG CAT CGCCA                CCGCCCACGGCGCCA  43 168
 IUJ48_10955 NONE
 IUJ48_10950 2358187 .. 2358202 -  -3.2  -3.21924   CCATGCCGGATAACA              TCATCC GACA GGGTGA               TCGATCGCGTTTTTT  45 58
 IUJ48_10940 NONE
 IUJ48_10935 NONE
 IUJ48_10930 2351883 .. 2351908 -  -7.5  -2.91997   TCGCACACAGAATTA         CGGATAGGCCC ACGG AGGACTACCCG          GCCGTCAGTAGTCCA  54 30
 IUJ48_10925 2350490 .. 2350521 - -17.5   -4.1964   CGTAACAGTTGAAAA      TGAAGAAGCCGCT CATGAC AGCGGCTTCTTCA       AGGAGCCTGTCCGTA 100 70
 IUJ48_10900 2344538 .. 2344550 -    -2  -3.70364   CACAAAATCAGAGAA                TAGT TGCCT ACTA                CAGCAACCCGCTCTA  53 54
 IUJ48_10895 NONE
 IUJ48_10890 NONE
 IUJ48_10885 2340466 .. 2340486 -  -3.2  -4.13767   TCCTTGACGGTAAAA            CCTGACGG TAAAG CCGTCACA            AGCCGGAGGAAACCT  60 472
 IUJ48_10855 2335318 .. 2335341 -    -3  -3.00525   CTGGCCGAAAGGATA          GGCCTCACGG GACG CGGTAAGGGC           TGTTTCGCACCAAGG  42 41
 IUJ48_10840 NONE
 IUJ48_10835 2331723 .. 2331740 -  -2.5  -4.08064   AAGGTGGTGGGAAAA             CCCCGCG TCGT CGCTGTG              GCCACTCCGACATCC  58 283
 IUJ48_10830 NONE
 IUJ48_10825 NONE
 IUJ48_10820 NONE
 IUJ48_10815 NONE
 IUJ48_10810 NONE
 IUJ48_10805 NONE
 IUJ48_10800 2322559 .. 2322583 -  -6.9  -2.78384   GGCTGGGGCAGCATA          TCGCCGCCGTG GTG CGCGGTGGCGG          CGTATCTTGGGAGCT  46 78
 IUJ48_10750 2314289 .. 2314303 -  -3.4  -4.05033   TTCACCGCAGAGAAA               GACGGC TAC ACCGGC               CAGCTCCGCACCCTG  60 359
 IUJ48_10725 NONE
 IUJ48_10720 2308051 .. 2308072 -  -4.3  -3.32844   GCTTGGAGGGGAGAA           TCATGCGGC CCCC GTCGCTTGA            GCATCTTCAAAGATC  49 4
 IUJ48_10715 2307809 .. 2307822 -  -3.7   -2.7186   AAAGGTGGTGAATCA               CGCGG TCCT CCGTG                CCACCAAGCCACTTT  42 9
 IUJ48_10710 NONE
 IUJ48_10705 NONE
 IUJ48_10700 2303308 .. 2303320 -  -6.9  -3.78778   TGAGCAGACCAAGAA                GGCAG TGG CCGCC                CAGGTTAGCGAGACC  61 412
 IUJ48_10665 2298048 .. 2298069 - -10.1  -3.21276   TTTCCCGGCAGAACA           TGCGCAAGC TCAT GCTGGCGCA            TCCGGGCAGCTTTCC  60 252
        sul2 2294546 .. 2294566 -  -6.8  -3.73775   GTCACCGCGACGAAA            GACACGGC CAGCC GCCATGCC            GACGCGCAAGGCGGT  62 196
 IUJ48_10615 NONE
        arsH NONE
 IUJ48_10605 NONE
        arsB 2288636 .. 2288658 -    -4  -3.07935   AGGTCAGTGATCGAA           TGCGCCAG GAAGCGG CCGGCGCG           GCAATCTGCAATCAT  45 66
 IUJ48_10595 2288353 .. 2288377 -  -9.9  -3.84961   CAGCTAATGACGAAA          GGGCGGCCACT CGA ACTGGCCGCCT          TTTTCAATCTTCACT  73 29
 IUJ48_10530 2276358 .. 2276394 -  -5.9  -3.17219   GATAAGGCGCAGGAA   CAGGCCACTGGGATCGC GCGCG GCGATAC--GCGGCCTG   CCGCTCAGGCCTGCT  49 30
 IUJ48_10525 2275731 .. 2275752 - -15.1  -3.07994   GGCAACGCGAGGCAA           GGCGCGCGA CCAA CCGCGCGCC            GCCGCCGTCAGGCCG  80 33
 IUJ48_10520 NONE
 IUJ48_10515 2273610 .. 2273633 -  -5.2  -3.06183   GCGATGGGCAGGGAA          TTGCATGGCG TTCG CGCCGTTCAA           CGCGACATGGCGTTC  47 22
 IUJ48_10505 2271382 .. 2271392 -  -8.2  -3.73224   CGACCGGCGATGAAA                 GCCG TCC CGGC                 CGTGTGGGTCGGGGA  67 121
 IUJ48_10500 2270114 .. 2270131 - -12.7  -5.90981   CCAGAGCAAAAAAAA             TCCGGCC CGAA GGCCGGA              AAAAATTACAACAAC 100 228
 IUJ48_10485 NONE
 IUJ48_10480 2268904 .. 2268919 -    -6  -3.54424   GGCCAGTTTCGGAAA              GGCCTG CTCC CTGGCC               AGCCCCGCGCCCATC  55 90
 IUJ48_10475 2268427 .. 2268477 -  -9.6  -3.43071   CGCGAGATGAACGAA CGCCACTTCGAGGTGCAGACGC TGGCCGG GCGTGTGCTGCCCGAAGCGGCC AAGGCCTTCATCGCC  65 94
 IUJ48_10465 NONE
 IUJ48_10460 2264872 .. 2264887 -  -7.5  -3.53012   CGGTGTCTTTTCAAA              GCCGG GCCAGG CCGGC               GGGCGGGGGGATTAT  60 90
 IUJ48_10455 2264199 .. 2264214 -    -6  -2.52464   CTGCCCGGCAACCGA              CGGCGC CGCG GCGGCG               GGGTCACGGCAACGT  44 338
 IUJ48_10440 2260401 .. 2260426 - -10.3  -2.73875   CCGCTGGCAATATGA         GGTGTGGGCCG CGAA CGGCACACGCC          ACGGGATGGAGCCGT  56 74
 IUJ48_10430 NONE
 IUJ48_10425 2258078 .. 2258101 -  -8.9  -2.71364   GTATCCCTGCAAGGA          TTGGGCGGCG GAGAG CGCCGCC-AA          CAACTCATATTACAC  53 35
 IUJ48_10420 2257656 .. 2257675 -   -15  -4.58466   CCCAGAATGACAAAA            GCCACCCC AACC GGGGTGGC             TTCGCCGACTCGACG 100 53
 IUJ48_10280 2225904 .. 2225926 - -12.7  -3.86015   CAGTGCGCGTAGAAA          CCCCGC-CGG GAGT CCGAGCGGGG           TTTTTTTCATGAGAG  86 32
 IUJ48_10220 2217261 .. 2217276 -  -3.9  -4.07568   CCGCGCCGGGGAAAA              CACGC CAATCC GCGCG               CGCGACGTCCTCAAG  62 174
 IUJ48_10210 2216353 .. 2216385 -  -7.8  -2.62184   TTTTTCCCCAGACGA     CGAATTGGGAGCCGCA TAC TGCG-CGCCCA-TTCG     ACCAAACGAGTCGGA  50 43
 IUJ48_10205 2215739 .. 2215757 - -11.6  -5.81412   GCGATGGAAAAAAAA             TGGCCGCC TGG GGCGGCCC             GCGTTGGTTCGTTTA 100 38
 IUJ48_10200 2215237 .. 2215275 -  -5.3  -3.14344   GACGGCCGCGATGAA  GTCGATCCCG-CGCGCCAT GAC ATAG-GCGACGGGAACGAG  GATCAGGGCGCCGGT  47 40
 IUJ48_10195 NONE
 IUJ48_10190 NONE
 IUJ48_10185 NONE
 IUJ48_10180 2213991 .. 2214003 -  -3.3  -3.13773   GCGGACAGTGAAAAT                CTTGG GTT CCATG                TCAGCAGCTCCGTTC  43 39
 IUJ48_10175 2213211 .. 2213224 -  -3.7  -3.08046   TGGTTATCGGAAAAG               GCAGG ACGA CCAGC                GCGCGCAGTACTTGG  45 0
 IUJ48_10170 NONE
 IUJ48_10165 2211728 .. 2211746 -  -4.5  -4.15222   AGGTTGCGGAACAAA             GCCATGT CGGTC ACCTGGC             CTTATTCGGGCGCCT  62 27
        rdgC NONE
 IUJ48_10155 NONE
 IUJ48_10150 2208046 .. 2208083 -  -8.5  -2.83822   CTGAGCCCATAATCA  TCGGG-GCGGC-CATGG GACGCG CCATGCGCCCCGCCCGA   GGCCGTCGGCCCTCG  55 90
 IUJ48_10145 NONE
 IUJ48_10140 NONE
 IUJ48_10135 NONE
 IUJ48_10130 NONE
 IUJ48_10125 NONE
 IUJ48_10120 NONE
 IUJ48_10115 NONE
 IUJ48_10110 NONE
 IUJ48_10105 2202245 .. 2202300 - -15.9  -3.86015   TATGCGCCGTACAAA TAATTAAAGGGCATAAGCAAATTCCC TAATC GGGA-TTTCCTTATGCCCTTTCATTA CTGTCAGTTATTTCA  93 60
 IUJ48_10100 NONE
 IUJ48_10095 2199704 .. 2199752 -  -3.8  -3.21416   CAGCGTCATCAGGAA CACGACCACCGCGGCTTGCGCCAC GCG GCGGAGCA-GCCA-AGCGGTCATT GCGCGGTCTCCGCCT  47 21
 IUJ48_10090 NONE
 IUJ48_10085 NONE
 IUJ48_10080 NONE
 IUJ48_10075 NONE
 IUJ48_10070 NONE
 IUJ48_10065 NONE
 IUJ48_10060 2191584 .. 2191605 - -17.3  -4.86385   ACGCCGAAAAACAAA           CAGGCCGCG AAAA CGCGGCCTG            TCCAGGTACTGCGCG 100 49
 IUJ48_10050 NONE
 IUJ48_10045 NONE
 IUJ48_10040 NONE
 IUJ48_10035 NONE
 IUJ48_10030 2185643 .. 2185667 - -18.6  -3.17194   ATGGGGGTAAGGCAA          TGCGCCCCGC GTGGG GCGGGGCGCA          GTGGAAGGCGGAAAG  89 138
 IUJ48_10025 2184300 .. 2184338 - -16.9  -4.51812   GGGTAGAACAATAAA  GCAGAACGGCAATCCCGC GCGA GCCGGATTGCCGTTCT-C   TCTGTGTGGCGCCGT 100 459
 IUJ48_10015 NONE
 IUJ48_10010 2182353 .. 2182365 -  -4.7  -3.14527   GAATCCCGAGGAATA                CGGCG TGA CGCTG                CGGCCGCTGCCGGAG  47 279
 IUJ48_10000 2180026 .. 2180039 -  -8.1  -2.71011   AGTCTTTTGGAATTA               CAGCC GGAT GGCTG                ATAGTTAAGGAGTTT  51 84
 IUJ48_09995 2179101 .. 2179113 -  -6.2  -3.28791   AGTGCTGCTGCAGAA                CGCG ATCTA CGCG                GGCGTGCCGGCGGCC  52 316
 IUJ48_09965 NONE
 IUJ48_09960 NONE
 IUJ48_09955 NONE
 IUJ48_09950 2171119 .. 2171132 -  -3.7  -3.29144   CTACCGGTTCGACAA               GAGCC TGTC GGCGC                AGTTGAATATCAACA  47 226
 IUJ48_09920 2164432 .. 2164447 -  -4.6  -3.29837   GTCGAAAGACGAAGA              GGGCGT CCCC ACGCCT               GCCGATGCGCCGCCG  49 424
 IUJ48_09895 2156685 .. 2156714 - -12.2  -2.91264   CTCGGCATCGAGACA      CAGCGCCAGGC-CC GGAC GGTGCC-GGCGCTG       ATGCGCGAGCTGGCC  64 283
 IUJ48_09885 NONE
 IUJ48_09880 2153549 .. 2153567 -  -7.3  -3.05596   CATCCCGCGATCGAA             TGGGCCG TCGTG CGGCCCG             ACAGCCTGGTCGACC  52 254
 IUJ48_09870 NONE
 IUJ48_09865 2151645 .. 2151659 -  -5.7  -3.29511   GCCAGCGCCCTAGAA               CAGCT CGTCC AGCTG               TTCGAAGAAGCGGCG  51 5
 IUJ48_09860 2150676 .. 2150708 - -21.9  -3.06501   GACACGGGCATTGAA      CCCGGCGCGGCGGCC CGG GGGCGCCGCGTCGGG      GCCAGCGCGTCGATC 100 39
 IUJ48_09850 NONE
 IUJ48_09845 2147880 .. 2147895 -    -6   -4.4078   TCCTGGGAAGCAAAA              GGGCGC CGAA GCGCCG               TTTGAAGGAATCCCG  73 63
 IUJ48_09840 2147033 .. 2147052 -   -15  -3.53012   TTCCCTTCCGGCAAA            GGGCCTGC CTGC GCAGGCCC             TGGCGGCCAATCAGC  86 36
 IUJ48_09835 2145429 .. 2145443 -  -2.7  -2.52464   GGGCCGGTCAAGCGA               TGGCC GGCAT GGCCC               GCGGGCGCAGCGTGG  37 3
 IUJ48_09830 NONE
 IUJ48_09825 2142416 .. 2142432 -  -5.8  -3.61398   CGTGCTGGTCAACAA             CGCCGGC ATCA GCCG-CG              TGATCGCGCACGGCG  57 515
 IUJ48_09810 2140424 .. 2140457 -  -8.7  -2.53876   CTTGACCGCAAGCCA     CCTCGCCACGGCG TTGCCCGG CGCCGCGCCGCGG      GCGACGCAGGCGGCC  51 266
 IUJ48_09800 2137900 .. 2137930 - -10.3  -2.70932   TCCCGCGGCCAATGA      GC-CGGCGCCGGCG GCAT CGCCGCTGCCGCGC       CTGTCGCGCGCCGAA  56 228
 IUJ48_09785 NONE
 IUJ48_09780 NONE
 IUJ48_09775 2116967 .. 2116991 - -18.6  -2.57092   AAGGCCAGTAATGCA          CACGGCCCCG ACCGG CGGGGCCGTG          GGGGCGCGGGTCGGC  86 72
 IUJ48_09755 NONE
 IUJ48_09750 NONE
 IUJ48_09745 2110722 .. 2110749 - -15.6  -2.57211   ACGCCGCCGCACAAG        GGCGCGACCGCGC GGG GCACGGTCG-GCC        GCGCGAACGTGGGTT  77 40
        crcB 2109257 .. 2109273 - -15.1  -4.49556   GGCGGAGGAAAGAAA              GCCCGGC CTG GCCGGGC              TTTTTTCATGGCGCC 100 141
 IUJ48_09720 NONE
 IUJ48_09715 2104590 .. 2104612 - -17.7  -4.25104   GCGGCGGCATGAAAA           GGGCCGGCC TGAAT GGCCGGCCC           GCGAACCAGGCGCGG 100 54
 IUJ48_09700 2101663 .. 2101681 -  -2.3  -2.57132   GCGTTCGTTCAGAAC             GCGTAGA CCACC CCGACGC             TGCCGAACACGTTGG  38 0
 IUJ48_09695 2100674 .. 2100707 -  -8.1   -3.4252   CGTGACGCAGCAGAA    CGCCG-CGCTGGTCG AGCAGG CGGCC-GCGTCGGCG     GCGTCGCTGGAGACC  58 191
 IUJ48_09685 NONE
 IUJ48_09680 2097504 .. 2097517 -  -3.8  -3.01712   TTGCGGGCGTGAATA               CTGC GGTTAT GCAG                GGTTCCCGAACGAGA  44 52
 IUJ48_09675 2095039 .. 2095065 - -15.2  -4.65895   GGCCTGACGCAAAAA         GAAGCTCCACCG AAT CGGTGGAGCTTT         TTTATTCGCGCCGTT 100 43
 IUJ48_09665 2089957 .. 2089997 -    -4  -3.15861   CATCAGCGCGATGAA GACGGCGAACAGG-ATG-CC GGC GATCATGCCTGGCCCCCGTC GGCCTTGGGCAGCGG  45 8
 IUJ48_09660 NONE
 IUJ48_09655 2087436 .. 2087472 -   -15  -4.09864   ACGGACCCTCCAAAA    GGTGACGGGCGCCGGC TTGTG GCCGGCGCCCGTCTTT    TGGTGGGCGGGATCT  95 121
         cfa 2082123 .. 2082165 -    -4  -2.78384   GCCCGGCCTACCAGA GCGAGGCCGAGC-TGCGCG AGGCGG CGGGCAAGATCGGCACCAC CATCTTCCATCCGGT  40 411
 IUJ48_09620 2079759 .. 2079774 -  -4.6  -3.64703   CCTGGCCTACGCAAA              CGCGGC CCGC ACCGCA               TCGAACGCGGCCATC  55 1
 IUJ48_09615 2078674 .. 2078702 -  -9.5  -3.28712   GCTGGCGTCCGACAA       CCTGCCGC-CGC TTTGAC GCGCGCGGCCGG        CTGGGGGTATCAGCG  62 35
 IUJ48_09605 NONE
 IUJ48_09600 2074592 .. 2074610 -    -3  -3.13403   TGCCGCCCACCAATA             TCGTGCTG GCG CCGCACCA             TGGCTCGGCGTGGTC  43 329
 IUJ48_09580 2068777 .. 2068799 - -10.5  -2.71712   GTTGGGCGGTGAAAT           GGCCGGCGA TCGAT TCGCCGGCG           GCGTCATCCGCGGCG  59 486
 IUJ48_09570 2067271 .. 2067283 -  -4.8  -3.23899   GTGCAATCAATTCAA                TCCG GGGGT CGGA                CAGCTTTCAAAGCGC  47 113
 IUJ48_09515 NONE
 IUJ48_09510 2053596 .. 2053615 -  -5.6  -4.25104   CGCCCCGGATGAAAA            GCGCCCCA AAGG TGTAGCGC             GGGAGGATAGGGGGC  70 58
 IUJ48_09475 2048783 .. 2048836 - -13.2  -4.77036   CTTGATCATCAAAAA GTGAATA-CCGGCGCGTTGCGC-GCC GCAC GGCAGCGCCACGCATCGGGCATCCAC GAACGGGATGCGCAA 100 98
 IUJ48_09470 NONE
        groL 2046727 .. 2046751 - -19.3  -5.83822   CACACGCAAAAAAAA          GGCACCGCGCC AGT GGCGCGATGCC          TTCACGCTGCTCCGG 100 52
 IUJ48_09460 NONE
 IUJ48_09455 2045601 .. 2045631 - -27.6  -4.11216   CCCGGATTGTGAAAA       CGCCGCGCCACGGC AGT GCCGCGGCGCGGCG       CATCGTTTACGCCAC 100 32
 IUJ48_09445 2039501 .. 2039535 -  -3.5  -3.29144   CGATTTCCTGGACAA    GGGA-TCGCTCAACGCC TAT GGC-CTGGGCGGGTCCC    TGATGCTCGACTACG  47 445
 IUJ48_09430 NONE
 IUJ48_09425 NONE
 IUJ48_09420 NONE
 IUJ48_09415 NONE
 IUJ48_09410 2032837 .. 2032862 -  -3.1  -3.30701   CCGCAGGAAATGGAA         GGCGCTCAGGTC GAG GTCC-ATGCGCC         GTCCTCTTTTTCCCG  47 5
 IUJ48_09405 NONE
 IUJ48_09400 NONE
 IUJ48_09395 NONE
 IUJ48_09390 NONE
 IUJ48_09385 2024252 .. 2024302 -  -3.7  -2.62244   GGCCTCAAGAAAATC TGTACGCGCCC-GGCCGCCGCCTC CGTC GACGCGCCGTCCAAGGCGCGTGGT TACGGCAGGATGTTC  40 368
 IUJ48_09375 2022759 .. 2022775 -  -5.7  -3.06796   GGCCAGCTTATCGAA              CGCCGGC GGC ACTGGCG              CGGAAGGCAAAAAAG  49 1
         fdx 2015329 .. 2015348 -    -7  -3.35679   CGCGGTCATCCACAA            TGCCGGCG TGTT CACCGGCG             CCGCCATCCTGCCGG  55 501
 IUJ48_09340 2013728 .. 2013762 - -19.3  -2.87564   CGAGGTCTGGATAGA    TGGCCAGCCGCTGGCG CAAG CGCC-GCGGCAGGCCA     GGGCGCGCCTGGCCT  82 442
 IUJ48_09320 2011290 .. 2011302 -  -3.3  -3.09492   CCGGGAACCGGAAGA                GCGCT GGT ACCGC                AGCGACGCCGTCGAA  43 242
        thiM 2008346 .. 2008370 - -12.2  -3.13522   ATCCGGTGACCAACA         CGCTG-GTGCC GGTG GGCACGCAGCG          CACCGACGGCGCCGA  68 515
 IUJ48_09295 2004262 .. 2004305 - -18.9  -2.73441   TATTACCGCTGAAAG CCGCCAT-GACGCGGGCGCG ATTCG CGCGCCCGCGTCGACTGCGA TGCGTTGCCTTCAAC  90 78
 IUJ48_09265 1997508 .. 1997542 -  -3.3  -2.52623   GGCGCGCCAGAAGAG    GGAGCGGACCGGCAGC CAGC GCATCAGG-CCGCGCC     GGCCAGCACGTAGCC  39 14
 IUJ48_09260 1995999 .. 1996021 - -11.9  -2.71263   AACTGCGCGGAATCA           CGCCGGCGC AGGTG GCGCAGGCG           ACCACGGCCAATGCC  59 141
 IUJ48_09240 NONE
        recJ 1990350 .. 1990385 - -19.2  -4.07568   GCGGGGTGGGCAAAA    GAAAATGGGCGCATCC TCGC GGATGCGCCCATTTTT     ATTCGGTATCGGCGA 100 131
        prfB 1987642 .. 1987654 -  -3.3  -2.52896   GTATCGCGGAACTTA                CACGC CTT GCTTG                AGGCTGGCCTGGATG  39 10
 IUJ48_09220 NONE
        lysS 1985261 .. 1985305 -  -9.2  -2.71483   ACAGGGCGGCAACCA CCGCCGCCAGCATCAGGATC TTGAG GATCACGATGCCGACCGCGT CTTAGTCTTCACGGC  56 27
 IUJ48_09210 1984440 .. 1984476 -  -7.1  -3.15544   GGGCACGTTCAGCAA    GACCCTGTACCCCGGCC TGC GGATGGGCTACATGGCC    TTGCCGGAAGAACTG  53 517
        benE NONE
 IUJ48_09195 1980685 .. 1980718 -    -6  -3.85704   GCAGCAAGGAGGAAA     TCCTGG-TGGCGGTG ATGAA CAACGGCATCCAGGA     GGTGCTGGACGAAGG  63 457
 IUJ48_09150 1971496 .. 1971506 -  -6.8  -3.73224   TGATGGCGTATGAAA                 CCAG CCA CTGG                 CGCTATGCCTTGAAC  61 164
 IUJ48_09085 1958372 .. 1958389 - -12.7  -4.44548   GACAGGCAATGAAAA             CGGGACC CGAA GGTCCCG              TTTGGGGGTGACGCT  95 52
        lexA 1957541 .. 1957564 - -15.4  -4.56597   GGGGCGCGTCAAAAA          TAAACCCCGC TTGC GCGGGGTTTA           TTTTTGACGCGGCCG 100 71
 IUJ48_09050 1949646 .. 1949668 - -11.3  -5.32944   GCCACAATGAAAAAA          GCCCCG-CAC GCGA GTGTCGGGGC           TTTTCTTTTTGCTGC 100 57
 IUJ48_09020 1946484 .. 1946517 -  -8.7  -2.78384   CGGGGCGCGATGACA     CGCCCGCCGGCCGCGT CGC AAG-GGCCGGGGCGCG     CCTCATTCCTCGGCG  53 28
 IUJ48_09000 1943023 .. 1943051 -  -6.5  -3.21993   ATCGACAATATCGAA        CGCGTGCTGGCGG CGG CCGGCGGCACACT        GGCGCAGGTCATCAT  50 392
 IUJ48_08985 NONE
 IUJ48_08980 1940182 .. 1940193 -  -2.2  -3.74872   ACTCAGCGTAGCAAA                GACG GTCT CATC                 CTTCCATACCGCGTT  53 45
 IUJ48_08975 1939541 .. 1939552 -  -7.2  -3.90744   GCCGTTCGTAAAGAA                GCCG TTAC CGGC                 CATGTCGCCTACGTG  67 310
 IUJ48_08960 NONE
 IUJ48_08955 1935719 .. 1935729 -  -2.4  -3.06261   CGCCAATGGCCAACA                 GGGC TTC GACC                 TGCAGGCCAGCCGTT  41 440
 IUJ48_08920 1927766 .. 1927795 -  -9.3  -2.65354   GGCACGGCAAAGTTA       CCAACG-TGGCCGT GGC ACGGCAAGCGCTGG       AGCGTTGCGCCGCGG  55 43
 IUJ48_08915 1927335 .. 1927345 -  -6.8   -3.4997   ATACGGATAACAACA                 GCAC GGC GTGC                 CTTTCAAGTGTCGGT  57 29
 IUJ48_08910 1926740 .. 1926759 - -16.4  -4.13767   GCCGGGAGGTGAAAA            CGCCCGCC GGCT GGCGGGCG             TTGATGCCGCCATCG  95 92
 IUJ48_08900 1925116 .. 1925138 - -16.3  -3.17075   CGTCTGCCAATTCAA           GGCCCGGCA AATCA TGCCGGGCC           TTTTTGTTGGTGTTT  85 251
 IUJ48_08870 1921321 .. 1921333 -  -6.3  -4.64766   GGCAGATCGCAAAAA                GATCA GGA TGATC                TATGACGAACGGGAT  78 301
 IUJ48_08855 1919311 .. 1919329 -  -9.5  -5.47218   TTGGATGCAAAAAAA             CGGCGCC GAGAG GGCGCCA             TGTTTTGGTTTGGGA 100 119
 IUJ48_08840 1916822 .. 1916847 - -10.3  -2.73875   CCGCTGGCAATATGA         GGTGTGGGCCG CGAA CGGCACACGCC          ACGGCATGGAGCCGT  59 74
 IUJ48_08835 1915815 .. 1915825 -  -4.6  -2.78384   TGCGGGTTGATGAGA                 CCCC CCC GGAG                 ATTCGACGCCAGATA  44 486
 IUJ48_08700 NONE
 IUJ48_08695 NONE
 IUJ48_08690 1890437 .. 1890459 -  -9.9  -4.10552   CCGTAGCAAACTAAA          GCCCACATGC TAAC GC-TGTGGGC           TTTCTATTTAAGTCA  76 33
 IUJ48_08645 1885582 .. 1885592 -  -2.4  -3.02829   GAGAGTTGTGCAAGA                 GGGC CAG GCGC                 TGCTCCACCCGTAGA  41 67
 IUJ48_08640 1884909 .. 1884954 -  -8.9  -3.06492   TGACCCAGGGGAACA TCTACCACTATGAGCGAGGCC AGAC GATCCCGCCCGAAGTGGCAGA GCGACTTATTGAGTA  55 137
 IUJ48_08630 NONE
 IUJ48_08625 NONE
 IUJ48_08620 1882406 .. 1882421 -  -4.6   -5.4505   TCGGGCAACAAAAAA              TCCACC CGGA GGTGGC               TGGGATAGGGCTGAT  93 47
 IUJ48_08605 1879447 .. 1879461 -  -2.1  -4.07568   TCGGTGGGGTGAAAA               TTAGC GCTTT GCCAA               TGCGTCTGGATCATT  58 11
 IUJ48_08595 1877109 .. 1877157 -    -6  -4.07568   TGCGCCGGTTGAAAA GCGCCGCGG-ATGCCGT-TCTAGA GTA TCGAGATAGGGCACGCCGCGACGT GGAGGAGATAAGGCG  66 330
 IUJ48_08585 NONE
 IUJ48_08580 NONE
 IUJ48_08575 1874444 .. 1874470 -  -5.6  -4.02334   GATGGACAGGACAAA         CCAGCCTTCCCC CTC GGGGCGGGGCGG         TTCCCATGCGCTGAT  64 436
 IUJ48_08565 NONE
 IUJ48_08560 NONE
 IUJ48_08555 1873334 .. 1873360 -  -2.9   -3.7941   GATGTGTTAGAACAA         GCGCGACAC ACGTGGGAA GCTTCGCGC         AAGCCGGAAGATAGA  54 203
 IUJ48_08540 NONE
 IUJ48_08535 1869667 .. 1869680 -  -3.8  -3.55761   CAGCCATTCGGCAAA               TGCC AGTGCG GGCA                CCACAACCAGGGGTT  51 257
 IUJ48_08530 NONE
 IUJ48_08525 1867133 .. 1867159 -    -5  -2.64416   CATGTCTATGAGAAT         GCGTTCATCCGG CGC CCGGATCCACTC         CTTGTCTTCCCGCCA  43 112
 IUJ48_08520 1865847 .. 1865875 -  -4.8  -4.73388   AATTCCCAGCAAAAA       CAATGACTTAGGAT TTT ATCCT--GTCATTG       TTTTTGGCTGTTTTG  80 12
 IUJ48_08510 NONE
        dapD 1863559 .. 1863574 -  -4.7  -3.40299   TGACCAGATCCAGAA              CAACC GAGGGA GGTTG               GCCCTCCTGCCGCTG  51 100
        dapE NONE
        prmB NONE
 IUJ48_08490 NONE
 IUJ48_08485 NONE
 IUJ48_08480 1857885 .. 1857918 -    -9  -4.34771   GAAAAGGCATGAAAA     CGTCCTAC-GCTG TGGTGATGT CAGCCGTAGGACG     CGACGTAGGACGAAA  80 160
 IUJ48_08475 1855049 .. 1855084 - -13.4  -3.05596   GAGCGGGGCATGCAA    GCGTCCT-TGGCTGAAT GAA AACCAGCCATAGGACGC    CGCGGTCGGCGCAGT  72 190
 IUJ48_08470 1852395 .. 1852410 -  -2.6  -3.24747   GGCGCATAGGATGAA              TGA-CCA GCC TGGATCA              ATAGCGGTATCCGAC  44 23
 IUJ48_08465 1851274 .. 1851292 -  -4.4  -3.45366   CTGTGAAGCAACGAA             CGGTCGGT CAT ATCGTCCG             ATTCCGTTGGAAGCG  51 295
 IUJ48_08460 1848493 .. 1848525 - -18.4  -3.28712   CGTCCCCGTGGAGAA      CCCGCGCCGTGGCC GGTAT GGCCACGGCGCATG      TTAGGGATGAAGGCT  93 75
 IUJ48_08455 NONE
 IUJ48_08450 1846059 .. 1846075 - -15.1  -3.61398   CGCCTGGCCGAAGAA              GCCGGCG TGC CGCCGGC              CCTGGCCGAGACCAT  83 227
 IUJ48_08430 1841292 .. 1841308 -  -5.7   -3.9461   GCGCCGCAAGAAGAA              CGCCGCC GCG GGCGAGG              ACGCGACGCAGGCCG  63 347
 IUJ48_08415 NONE
        ileS NONE
 IUJ48_08405 1834090 .. 1834106 - -15.1  -5.32699   TCAAACAGGAAAAAA              CCCGGCC AAG GGCCGGG              TTTCGAAGGGGGCGG 100 50
       coaBC 1832727 .. 1832746 - -13.6  -5.27335   CGCCGCAAACAAAAA            CGCCAGAC TCGC GTCTGGCG             TTTTTGTTTGGCGGT 100 57
 IUJ48_08365 NONE
 IUJ48_08360 NONE
 IUJ48_08355 1825171 .. 1825187 - -15.1   -4.8622   TCGCGCAATGAAAAA              CGCCGCG TGA CGCGGCG              TTTTTTTCGGGCGGG 100 49
 IUJ48_08315 1817835 .. 1817875 -  -9.6  -3.15663   ATTGATTTTCAGCAA GCGCGGGATAGGGCGG-GCC AAT GGCGCCGCCCG-TGCCGCGG GCCGGCCGCGGCCGT  60 41
 IUJ48_08310 1816139 .. 1816157 -  -5.8  -3.27475   CGTCGCACGACAAGA             GCGGGCCG GCG CGGCTTGC             CGACAAGATCCGCAT  52 345
 IUJ48_08295 1813674 .. 1813691 - -12.7  -4.91109   GCGCCAGGAGAAAAA             CGCCAGC TTTC GCTGGCG              TTTTTTTATGCCCGA 100 47
 IUJ48_08280 1811160 .. 1811179 - -16.4  -4.46212   TGCCGCATGAGAAAA            GCCCGGCC GCCA GGCCGGGC             TTTTTTTTGTGCCGC 100 50
 IUJ48_08210 1787281 .. 1787313 - -10.6  -4.92757   GCAGTAATAAGAAAA     TAACAAGGCGGGGCC CGAA AGCCCCGCCT-GATA      ATGGCGCAACCTTAC 100 62
 IUJ48_08205 1786694 .. 1786711 - -12.7   -5.1287   CGGACATGCAAAAAA             GGGAGCC CGCG GGCTCCC              TTTTTTGCATGTCTC 100 53
 IUJ48_08170 NONE
 IUJ48_08165 NONE
 IUJ48_08160 1773893 .. 1773916 - -10.9  -3.01712   CGGCCTGGCGGAATA          CGCGCGGCG TCCGGT CGCGGCGCG           GCCCGCCTTCTTCTA  65 38
 IUJ48_08150 NONE
        kdsB 1770505 .. 1770521 -  -5.7  -3.17392   TATGCCGCAATGCAA              CAGCCTC TGC GGGGCCG              CGCCATGCGAAATAA  51 44
         adk 1769721 .. 1769771 - -21.4  -3.32844   CGCCGGATGCGACAA GGCCTTCGG-GCCGGGGCCGGAACGC GTT GCGT-CCGGCC--GGCGCCGAAGGCC TGGGCCTGCGAAGCG 100 45
 IUJ48_08135 1768810 .. 1768825 -  -7.5  -4.87803   GACGGCGAAAGAAAA              CGGGC GGGCCT GCCCG               GGGTATTGCAAGGAA  90 101
        murJ 1767179 .. 1767195 - -10.8  -5.58209   TCAAATGCAAAAAAA              GCCGGC GGGTA GCCGGC              TTTTTGCGGAGGTTG 100 59
 IUJ48_08125 1765806 .. 1765856 -  -4.6  -4.25104   GCGCTGCGAGGAAAA CCCCTCGGGCTGCAGAACCCGGGT GATAT ACCCGGG--CTGAGACCTGATGGG CGTCGATGGGATCGA  68 227
        rpsT 1765346 .. 1765363 - -11.3   -5.4833   CCAGGCAACAAAAAA             GGATGCC CGTG GGCATCC              TTCTTCATTTGCCGT 100 78
        lysA 1762614 .. 1762626 -  -3.3  -3.72695   AGGCGGTCGACGAAA                TCGCC GCG GTCGA                GGGCGTGGATGGGGT  55 342
 IUJ48_08080 1756752 .. 1756777 - -10.3  -3.75024   CGTGATGATGAAGAA         CCCGGCGCCCA CGCG TGGCGGCCGGG          TCCGGACCGGCGCCG  74 42
 IUJ48_08075 NONE
 IUJ48_08070 1754196 .. 1754217 - -12.9  -3.53012   GCCCCGTGTCGGAAA           GGCCAGGGG CCAG CCCCGGGCC            TTCACCATTAGGAGT  78 490
 IUJ48_08050 1750756 .. 1750787 - -15.9  -3.25823   TTCCGGGGACATCAA      CGTCCAGGCCCGCG ACGGG CGCGGGCCTGG-CA      AACGAACGGGGGAAG  86 51
        hpaR 1749969 .. 1749988 -  -9.2  -3.50853   CCGCTTCAACGATAA            CGGCAGCC CCGA GGCCGCCA             TGCACCAGATCAGCC  61 290
 IUJ48_08030 NONE
 IUJ48_08025 1745885 .. 1745908 -    -3   -2.8585   CCAGGTAAGGGAAAT          CAGGC-GGGGC AGG GCACCAGCGTG          TTGACGAGCCGGCCG  41 1
        hpaH NONE
        hpaI 1744195 .. 1744214 - -16.4  -4.65895   CCTCCGATGGAAAAA            CCGGCGCC CGTG GGCGCCGG             TTTTTTCCGTTGCTT 100 51
        hpnC NONE
        hpnD NONE
 IUJ48_07990 1738611 .. 1738662 -  -9.3  -3.53012   CTTTCTCGGCTGAAA CCGTGGCGATGCTCGAGCGCGGCGCC TAT GGCGGCGCGCTGG-GCTACGC--CGG CTTCAGCCTGCTCGG  61 169
 IUJ48_07965 1733991 .. 1734015 -    -7  -4.25104   GGCGCTGGACGAAAA          GCTGCGCGCC TGAGC GGCGCGTATC          GTCGCGGCGGGGCGG  72 83
 IUJ48_07945 1730520 .. 1730530 -  -8.2  -2.70932   TGCGGGCCGCAAGGA                 GGCG CGG CGCC                 GCGAAGGCCCGCACT  53 121
 IUJ48_07940 1728674 .. 1728687 -  -3.1  -4.82901   GCTTGCTCATAAAAA               TCCTC CGAT GAGAA                TAATCAGGAACCAAG  75 179
 IUJ48_07935 NONE
 IUJ48_07930 1726967 .. 1726992 - -16.1  -4.03234   CGGCGTGTACAGAAA         GCCCCGCAGGC GATC GCTTGCGGGGC          TTTGTTTTGCCGGGC  95 74
 IUJ48_07920 NONE
 IUJ48_07915 NONE
 IUJ48_07910 NONE
 IUJ48_07905 1720193 .. 1720230 - -18.4  -2.52464   CTTTTTTTCAAGGGA   CCCCGGCGCGACG-GGC GAATT GCCGCGCCGCGCCGTGG   GAAGCCGGATCACTC  86 35
 IUJ48_07900 NONE
 IUJ48_07895 1719250 .. 1719301 - -12.3  -2.53581   CACACGCCGAACGCA TCACGGC-CGCGCCCG--AGGCGCCG GCG CGGCCCTTGACGGGCGCGCGCCGTTA GCGGGGCCGGGAGGG  64 23
 IUJ48_07880 1716750 .. 1716798 -  -8.9  -3.28712   GCCGTCGTTCGACAA CAGCGTGGCG-CGG-CTGATCGA GAAGA TCGAGCAGACCGTCGGCACCCTG CTGCGCGACGCGGGC  59 267
 IUJ48_07840 1706095 .. 1706133 - -11.4  -3.23216   CGCCAGCAGCAGTAA   GCGCCGCGCCCGCGGGGC TTG GCCCGGCCGGCCCGCTGC   ACGTCGGGCTCGGTC  68 84
 IUJ48_07800 1700954 .. 1700989 -  -2.5  -3.58343   TGGAGTAGGCGTAAA   GGGCAGCCACGGCCGGA TCAC TCCA-CCTTCGC-GCCC    GAGTCCTTGACGATC  50 7
 IUJ48_07795 NONE
 IUJ48_07790 NONE
 IUJ48_07785 NONE
 IUJ48_07780 NONE
 IUJ48_07775 1696279 .. 1696305 -   -13  -3.53012   GTCTCCTTGTGGAAA        GCGC-GCCGCC TGTGCC GGCGGCTGCGC         CTGGTTTGCGGTTTT  78 48
 IUJ48_07770 NONE
 IUJ48_07765 NONE
 IUJ48_07760 1693257 .. 1693305 - -11.6  -3.29324   GGGATGTAAAGGCAA GCGCGGCGCGCCCGTCGTGGATGC GTG GGATCC-CGCCGGGCCCGTCG-GC CGGAGCGCGTCAGCG  68 35
 IUJ48_07755 NONE
 IUJ48_07750 1691527 .. 1691554 -  -7.6  -2.52543   ATTGCGGCGAATTCA        CGGCGCTGCGGCC GCT GGC-GCAGTGGCG        CGACCCGGCCGACTG  48 439
 IUJ48_07730 1688690 .. 1688706 -  -2.1   -4.2349   CCGCGAGATCGAAAA              GCCGGGT TTC ATCCGCC              TGAACTTCAGCGTGC  61 242
 IUJ48_07720 1686743 .. 1686762 -  -6.3  -3.05384   CTGCCGGTTATTCAA            GCCGCCG CGCCGC CCGCGGC             CAACCGTGGGCGCTA  49 38
 IUJ48_07715 1686031 .. 1686073 -  -7.5  -3.05384   GTTTTCGGTATTGAA GTCCACCGAGACGCCGCGC ACGGA GAGCAGCGGCTGGGCGGAG GAGGCGGGAATGCTA  55 55
 IUJ48_07710 1684208 .. 1684220 -  -9.1  -3.62096   CTCCAGGACGGGAAA                TCGGC CGG GCCGA                CGTGTAGAAAACGGA  68 45
 IUJ48_07705 1682459 .. 1682480 -  -2.9   -3.5125   CGTTTAATCAAAAAT           CCGGTCATGA GGC TC-CGCCCGG           GCTTTCGCCCCGGCG  49 199
 IUJ48_07700 NONE
 IUJ48_07695 NONE
 IUJ48_07690 NONE
 IUJ48_07685 1678216 .. 1678226 -  -8.2  -3.01712   TGGCGGCGGTGAATA                 GGCC CGC GGCC                 GTACGGGCTGTGCAA  55 223
 IUJ48_07670 NONE
 IUJ48_07665 NONE
 IUJ48_07660 1673274 .. 1673304 - -11.2  -3.15699   AGCCATGGACGAATA      CCGCGCCGCGCTCA AGGCG TG-GCG-GGCGCGG      CATGGCGAGGCGGGG  66 96
 IUJ48_07630 NONE
 IUJ48_07625 NONE
 IUJ48_07620 NONE
 IUJ48_07615 1664766 .. 1664803 - -13.3  -2.74012   CCACGACGTCAACCA   CCCGCATCGCGGCGCCGC CGA GCG-CGCGGCGGTGCTGG   CGCAGGCCGAGGCCA  67 218
 IUJ48_07605 NONE
 IUJ48_07600 1660956 .. 1660966 -  -2.4  -3.74693   CCGTACTGTAGGAAA                 CCGC GCC GCGT                 CCCACAAAGACTTTG  53 130
 IUJ48_07595 NONE
 IUJ48_07590 1658824 .. 1658842 -  -4.5  -2.78463   AGCCGGCGTACTACA             CGCGC TTCGGCTTT GCGCG             GATGCCGGCGCTGAC  43 204
 IUJ48_07580 1657386 .. 1657415 -  -7.8  -3.02043   AAGGCGGCTGGAACA      CCGGCTCGCTGGCC GCGG GGCC--CGTGCCGG       CGTTGGCGTGTGCGG  54 80
 IUJ48_07565 NONE
 IUJ48_07560 1652553 .. 1652572 - -10.6  -6.07969   TAAAAGCAAAAAAAA            CGGCGCCC CGAA GGGCGCCC             AAGACCGGCAAACCG 100 77
 IUJ48_07555 1650742 .. 1650759 -  -3.3  -3.57144   GTCGTCATCGCGAAA             TTGCGCC ATCA AGCGCAC              ATGATAGCGGCTGGC  51 42
 IUJ48_07550 1650211 .. 1650242 -    -5  -3.65046   GTCCGACTGCAAGAA      GCGCGC-GCGCCTGA ACG CCATGCGCTACGTGC      TGACCCGCTTGCCGT  54 128
 IUJ48_07540 1648391 .. 1648401 -  -5.4  -2.66695   CCGGTCATGAAATAT                 TCTG CAT CAGA                 TGTTACCGTGCAGCC  44 44
 IUJ48_07535 1647021 .. 1647045 -  -6.9  -3.17075   GGCGTTCGAACTGAA          GGGCGGGCTGG CCG CCGGCCGGCGC          CTGCTCGACAGCCTG  50 287
 IUJ48_07500 1639887 .. 1639937 - -19.7  -3.18199   GAATCGGCAAGGGAA TGCG-CGGCGGGGCGCGGCCCGCTG CGT CGGCAGGC-GCGACCCGCCACCGCA ATGGGCCTGGCGCCC 100 71
 IUJ48_07495 NONE
 IUJ48_07490 1637177 .. 1637214 -  -3.9  -3.41051   CCAGGGCTACGACAA   GCAGGACGCGCCGGTGC GCGT GAACCCGGGCGTGCTGG    CCGACGAGGCCTACG  49 490
 IUJ48_07480 1634451 .. 1634461 -  -4.6  -2.70932   CGGTTTCGGCAAGGA                 CACG CAG CGCG                 CCGTGATCCAGAATT  43 331
 IUJ48_07460 1629671 .. 1629681 -  -2.4  -2.92475   GGCATTGGGACAAAC                 CCTG AGT CCGG                 TCAAGCAGCCGCGTC  41 26
 IUJ48_07455 1628765 .. 1628781 -  -8.7  -4.07885   GAGCGCCTGGGAAAA              GCTGTCC ACC GAACAGC              AGGAACTCATCATCG  72 382
 IUJ48_07405 1616554 .. 1616564 -  -2.4  -3.91897   TCTGGCATGGAGAAA                 GGCC GCA GGCA                 GCATTGTGGAGGACT  56 281
 IUJ48_07385 1612474 .. 1612498 - -12.7  -2.79023   GAACGCTATCAATGA          CGGCGGGCGGC GTT GCCGCAAGCCG          GAGGCCGCGCGGTTC  69 76
 IUJ48_07375 1610922 .. 1610951 -    -5  -3.21099   TTGTCCTACGACGAA      CGGA-GGC-CGCCG GGAT CGACACGCCGTCCG       GTTTTTTTACTGGGC  49 32
 IUJ48_07370 1609848 .. 1609864 -    -5  -4.57837   ACATTGCTGGAAAAA              GGCGCG GCGCA CGCGGC              CGCCAATGGCATCGA  75 491
 IUJ48_07350 1607384 .. 1607414 - -10.3  -2.70932   CCGCCTTCGTAACCA      GCCGCGATCGCGCC GACC GGCGCGG-CGGGGC       CGCGCTGCCTACGCC  59 34
 IUJ48_07335 1605677 .. 1605732 -   -11  -3.28712   GCTGCCGCGCGACAA GCGCCTGGCGC-CGCTGTGCCGCGCC TTCATC GCCGC-GCCCGACGTGCGCCAGTCGC CCGAGGCCTGGGCCG  66 292
 IUJ48_07325 1604225 .. 1604259 -  -9.9  -3.01712   TTTCGCCGCGCAATA    GCGTCGCCCTGGCGCGC TTG GAGCGCG-GGGCG-CGC    CGGCCCGCGGCACGG  59 66
 IUJ48_07290 1586802 .. 1586823 -  -4.4  -3.55761   CATCGATGCGCGAAA           TCG-CGCCG TCGTG CAGCGGCGA           TATGACGCTCGAAAT  51 80
 IUJ48_07285 NONE
 IUJ48_07280 NONE
        dctP 1582690 .. 1582700 -  -2.4   -3.1372   CAGTCGGGAGGAATA                 GTCC ATG GGTC                 TCTGCCTGTGGCGGC  42 76
 IUJ48_07270 NONE
 IUJ48_07265 1580799 .. 1580813 -  -4.2  -2.52623   CCTGGTCGACAACAT               GGCC TGAGCGG GGCC               GCGCGTCCCGCTTCA  41 38
 IUJ48_07255 NONE
 IUJ48_07250 1578045 .. 1578068 -  -9.4  -2.62184   CGGCCGCGCACAGCA          GGGCGGCGCC CGGA GGCGCCGCGG           AAACGTTTACGCGCA  55 78
 IUJ48_07245 1577454 .. 1577503 -  -9.3  -3.04461   GATCGATGGTCAAGA TGCCGCACTCCTTGGAAGTATCCC GGT AGGATACCGCCAAGGCGCG-GCCA GCAGGGCAGGCGGGG  60 55
 IUJ48_07240 1576706 .. 1576749 -  -9.5  -3.02511   GCTATCGCCTGAAGA CCTGAGCGCGGCGGCGCCACG GCTG CGTGGCTCCGCC-CGCTT-GC CGCTCAGGCGGCCGC  59 29
 IUJ48_07225 NONE
 IUJ48_07220 1573007 .. 1573024 -  -8.3  -2.78463   AGGGGGCGCACTACA             CGGTGCG CGGC CGCGCCG              GGCCGGTGCGCGTGG  53 44
 IUJ48_07215 NONE
        ntrB NONE
 IUJ48_07205 NONE
        cynS 1569310 .. 1569362 -   -11  -3.02144   CGATGCGCTGGAAGA CGC-GGCGCGGGACGCGGCGGCGGC GGTG ACCGGCGCCCTGGCCCGTACCCGCG ACCTGGGCTGGGAAG  62 93
 IUJ48_07100 1527198 .. 1527220 - -10.4  -3.17075   CGCGTTCGAAGGCAA           CGGCGGCCGC GCC GAGGCCGGCG           TGTGGGAGAGCACGG  60 262
 IUJ48_07070 NONE
 IUJ48_07065 1522450 .. 1522462 -  -9.1  -2.89447   CGCCAAGCACAAGCA                CGGCA AGC TGCCG                GGATAGCGGGGCAGC  58 273
 IUJ48_07055 NONE
 IUJ48_07050 1519837 .. 1519852 -  -3.2  -3.21099   GGCGGTGACGACCAA              GGATCG CTCG CCATCC               TATCCGGGCGTGCCG  45 465
 IUJ48_07030 1515089 .. 1515111 - -11.2  -3.15544   GCGGAGTGTGAGCAA           GCCTGCAAGC GCT GCGCGCAGGC           GTGCGAAAAAATGGG  66 105
 IUJ48_07015 1512963 .. 1512988 -  -8.9  -3.28712   CTTCGGCGCGGATAA         CGCCGCGTCCGC GTC ACGC-CGCGGCG         CCGCCCGTATCGCGC  59 13
 IUJ48_07010 1512358 .. 1512381 -  -6.6  -3.53745   GATAGGTGAAACGAA          CCAGTCCGGC ACAT GCCCGACCGA           CACAATCTGTGTCGA  57 94
 IUJ48_07005 NONE
 IUJ48_07000 NONE
 IUJ48_06995 NONE
 IUJ48_06990 NONE
 IUJ48_06985 NONE
 IUJ48_06980 1503957 .. 1503972 -  -5.4  -2.70932   CCTCCTGGTCAAGCA              TCCATG GCCC CACGGA               CGCGGCGGTGCTGCG  44 205
 IUJ48_06975 1503003 .. 1503049 - -17.1  -3.05596   CAGGGCCCGACTGAA TTCCGCCCGCCCGCGGACCAC GGGAT GCGGTCGGCGGGCGGGCCGCC ATCACCCGGGGCGGC  85 27
 IUJ48_06965 1500162 .. 1500176 -  -7.8  -3.01712   CGCCGTTGGCGAACA               CCAACG TGC CGTCGG               CCTCGGCCGCCACCA  54 482
 IUJ48_06955 1498403 .. 1498413 -  -6.8  -2.57132   GCGCCGTTTCAGAAG                 CTGG CGG CCAG                 GCGCAGCGCCGCCGT  47 8
 IUJ48_06905 NONE
 IUJ48_06900 NONE
 IUJ48_06895 NONE
 IUJ48_06890 NONE
 IUJ48_06885 1481113 .. 1481132 -    -7  -3.55444   GGCGCATCCTGGAAA            GCGGGCCC GACG GGATCCGC             GTGCTGGGCAGCGAT  60 115
 IUJ48_06860 1476084 .. 1476098 - -12.8  -3.01712   TGGCCGTCGCCAAGA               CGCGCG AAC CGCGCG               CCGCCTAGCGGCCCC  71 69
 IUJ48_06835 1470372 .. 1470387 -  -2.6  -3.53444   TGACGCCGCCGGAAA              GCAT-GA TGG TCGATGC              CGCGGACCGCCGGGC  47 175
 IUJ48_06825 1468596 .. 1468625 -  -9.9  -2.87132   GCTCCGGGTGAGACA       CCGCCTTGC-GCCC TCA GGGCAGCAGGTCGG       CGCGGTGGACGATGT  58 9
 IUJ48_06820 1467899 .. 1467913 - -12.8  -3.30701   TTCGATGAAAGGGAA               GCCGCG CCG CGCGGC               GCGGGCAGGGGAGGG  77 55
 IUJ48_06815 1467031 .. 1467047 -  -3.5  -3.57561   TCCCAACCGCTCAAA              CGGCCTG CAG CGTGCCG              CTCACATGGATGCGG  51 4
 IUJ48_06810 1466659 .. 1466701 - -10.5  -3.14132   CCCCGTTGCCAGCAA GCGCCGCTCCCGCGTCCGGCG GGG CGCCGG-CTCAGAAGCG-CGT ATGCCTGCCGAACGG  63 14
 IUJ48_06805 1466134 .. 1466155 -  -2.1  -2.71712   GTGCGCTCCGCAAAG           CGGCGCAGC AATC GCTATGCCC            GTGGCGGCAGCGGGC  38 47
 IUJ48_06800 NONE
 IUJ48_06795 1465112 .. 1465156 -  -6.9  -2.64735   AGGGGACGGACATGA CGGACTCCTTGCGGGATAGCC TCG GGCTTGCCGGCACAGCATCCG GCGTTCCCGGGAGCG  47 48
 IUJ48_06790 1464737 .. 1464767 -  -8.9  -3.41527   CAACGCGGACCACAA       CGGGGCAGCGGTA TTTTT TACCGCCGCGGCG       CAATGCCCCGGTATC  60 71
 IUJ48_06785 NONE
 IUJ48_06780 1463770 .. 1463793 -  -2.2  -2.62522   GCACCGAAGACGAAG          CCGTCTTGGG GTGG CTCATGGCGG           GCTGCTCCATACCGA  38 17
 IUJ48_06775 1463292 .. 1463317 -  -6.1  -3.14468   GCCCACCATACCGAA         GGGC-GCGCC GGCCGAT GGCGCCACCC         AACCCACGCCGGGGC  50 230
 IUJ48_06690 1445837 .. 1445855 - -11.6  -3.17075   GGCCGGGCAATCCAA             CGGCGGCG CTG CGCCGCCC             GCCGCCACGCCCGAC  64 326
 IUJ48_06650 NONE
 IUJ48_06645 NONE
        clsB NONE
 IUJ48_06635 1436857 .. 1436894 -  -6.1  -3.05384   CTCGTCCCTACGCAA   GTGGCATGCCCGGCGCCG CGC CGGCGA-GAGCGCGCCAT   GGCCGTGGCCCCTGG  49 109
        glgA NONE
 IUJ48_06625 NONE
        treS NONE
        glgB NONE
        glgX NONE
        treZ NONE
        malQ NONE
        treY 1417543 .. 1417555 -  -2.6   -4.2803   CATCGGAATGGAAAA                GAGG CATGT CCCC                TGCCGGTTTATCGCT  63 168
 IUJ48_06590 1415934 .. 1415944 -  -8.2  -2.82516   CCTGGGACGACTACA                 CGCC GCA GGCG                 CTGGGCGCAGCCATG  52 152
 IUJ48_06575 1411642 .. 1411700 - -13.7  -3.08812   CCCTGTGGAAGAAAC TGCGCGCGGCGCGTTGACCGCCGGCCGTG GCG CCGGGCCAGCCGTC-ATGCGCCGCG-GCC TTTCGGCCGGGCCGC  76 11
 IUJ48_06560 1408765 .. 1408801 -  -3.6  -3.29511   TGTATTGCGGGATAA   CCATGA-GTCCGGCGCGC GCG GCGCGGCGGGTGTC-TGG   AAAGGTGAACGATCG  45 54
 IUJ48_06555 NONE
 IUJ48_06550 NONE
 IUJ48_06545 NONE
 IUJ48_06540 NONE
 IUJ48_06535 NONE
 IUJ48_06530 1402166 .. 1402187 -  -9.4  -3.28712   GCGGGCCGGCGAGAA           CCG-GCCCG CGCGC CGGGCGCGG           CGTTGAGCCTTGCCG  62 139
 IUJ48_06520 1398998 .. 1399020 -   -17  -3.12351   CCGGTCCATAGCCAA           CGGACCAGCC GCC GGCCGGTCCG           CCTGATATATCAAGG  85 244
 IUJ48_06475 1391189 .. 1391216 - -24.2  -3.18264   GCTGTCACGCATGAA        CGCCGCGCGTCC GTCG GGACGCGCGGCG         TTTCAGCATCCGGAG 100 28
 IUJ48_06465 1388701 .. 1388758 - -11.2  -2.64803   CGAGCGCGAAACCTA CGACGCATTG-CGCGCGCTGGCGCAGCGC TGA GCGCTGC-CC-GCGTCCGTCATCGCGGCG CCTGGCGGCGCCCTA  62 38
 IUJ48_06455 1385884 .. 1385897 -  -2.3  -4.25104   TCTTCTCCAGGAAAA               GTGGG GAAG CCGAC                GACACGGTCTTGCGG  63 420
 IUJ48_06450 NONE
 IUJ48_06445 1383575 .. 1383598 -  -9.5  -3.62046   GGACGTGCGCAAGAA          CGGCTGCGC CTGCAT GCCCAGCCG           CCAGATCCGCGGCAT  67 290
 IUJ48_06425 NONE
 IUJ48_06420 NONE
 IUJ48_06415 NONE
 IUJ48_06410 NONE
 IUJ48_06405 NONE
 IUJ48_06400 NONE
 IUJ48_06395 1375088 .. 1375121 -  -8.1  -3.22774   GACAGCGACGAGCAA     TGG-CTGGACTTCGCG CGC CGCAACGGCCAGACCA     TCTATCACCCGATCG  53 270
 IUJ48_06370 NONE
 IUJ48_06365 1368939 .. 1368958 -  -7.8  -3.29461   GAAGGGCGGCGACAA            CGTGGCGT TCTG ACGCCAGG             CCGGGCAAGGGCGTG  57 157
 IUJ48_06345 1364677 .. 1364700 - -10.2  -2.78679   GGGCCCCAGTGAAAC          GCCGGACGCC CCCG AGCGTCCGGT           TTGCTGGCTTGCCGT  60 72
 IUJ48_06340 NONE
 IUJ48_06335 NONE
 IUJ48_06330 NONE
 IUJ48_06325 NONE
 IUJ48_06320 1358952 .. 1358977 -  -9.1  -3.07113   CACCAGGGCATCGAA         CTGACGGTGTTC GGC GAAC-CCGTCAA         CCGCGTGCGCGTGCT  55 499
 IUJ48_06305 1354567 .. 1354588 -  -6.5  -3.78934   GGTTCGCGAGAACAA           GATCAAGGC CCTG GCCGTGACC            GGCGCCCAGCGGCTG  61 339
 IUJ48_06285 1350347 .. 1350383 -   -10  -3.35349   AAAGAAGTCCTACAA   GCGC-ATGGCGGGGGAC GGAG GGCCGCCGCCGTGGCGC    GCCACCGGGTGGCAG  67 49
        acnA 1347348 .. 1347375 - -21.4  -4.72272   CTCGGCGATGAAAAA        GCCCCTGGAACC TCGC GGTTCCAGGGGC         TTTGCCTTTGCGGCC 100 47
 IUJ48_06265 NONE
 IUJ48_06260 NONE
 IUJ48_06255 NONE
 IUJ48_06250 NONE
 IUJ48_06245 1338983 .. 1339024 - -10.2  -2.61264   TCGCTGACGCACAAC CTGCGC-GACGTGCGCATGCC GCA GG-ATGCGC-CGCCCGCGCCG TACGTGCCGGCCTTC  55 294
 IUJ48_06235 NONE
        earP 1335762 .. 1335774 - -10.5  -3.51232   GCCGCCGCAAATGAA                GGCGC CAG GCGCC                GGTGCCGCAAGGCCC  69 158
         efp 1335094 .. 1335118 - -13.6  -6.07627   ACGGCCAAAAAAAAA         GCGCCAGACCC CGAA GGG-CTGGCGC          TTTTTCGTGCCTGCT 100 47
 IUJ48_06135 1316629 .. 1316646 - -11.3  -5.79526   ACAGGCCAAAAAAAA             CGCCTGT CGAA ACAGGCG              TGGTGGCGGGCGGGT 100 69
 IUJ48_06130 NONE
 IUJ48_06125 1314113 .. 1314144 - -27.4   -4.4078   GCGCCCGAATGAAAA      CCGCGCCCCGATCC TGGC GGATCGGGGCGCGG       CATGCGCGCGCCTGG 100 46
 IUJ48_06085 1302475 .. 1302494 -  -4.8  -3.53444   GCACGGGCCTTGAAA            GCCGGTGG CGGG CTGCCGGC             GCTTGCAGCCTGCGC  53 66
 IUJ48_06075 1299468 .. 1299499 - -21.6  -2.52464   CCGGGGCGGAACTGA      CGCGGGCGCAGCGG AAAT CCGCTACGCCCGCA       ATCGCCGTGCCCGAC 100 71
 IUJ48_06070 1297892 .. 1297907 -  -8.2  -3.85817   ATTCCTGGGGATAAA              CGGGAC CGGA GCCCCG               TTTATCTTCCCCCCG  69 70
 IUJ48_06065 1296491 .. 1296512 -  -3.5  -3.53012   TGTTCTTCGGCGAAA           CCGTGCCGC GCGA GCGGGTCGA            CCGCGCCAACGCCGG  49 411
 IUJ48_06025 1285252 .. 1285277 -  -3.2  -3.53091   ACCGCGCGGCGGAAA        TCGCTCTCGGCC AGCA GGCCG-G-GCGG         CTGGGTCGCCGGCGC  49 90
 IUJ48_06020 NONE
 IUJ48_06015 1283361 .. 1283382 -  -5.1  -2.82623   CGGCCGCCAGAAGGA           TGAGGCCGCG CGC CGGGGC-TCA           GACACGGCCGTACAT  45 23
        vanZ NONE
         gmd NONE
 IUJ48_06000 1280895 .. 1280906 -  -7.2  -3.04144   CTTTCAGTGTGAACA                GGCC CTCA GGCC                 ACGGGCAGGGGTTGG  50 19
 IUJ48_05995 NONE
 IUJ48_05990 NONE
 IUJ48_05985 NONE
 IUJ48_05980 NONE
 IUJ48_05975 NONE
        wcaF NONE
 IUJ48_05965 1273121 .. 1273161 -  -9.6  -2.79831   GCAAGCGCGACGACA CGCCG-TA-GCGGGCCGCGG CTT CAGCGGCCGGCGTCGCGGCG CGCGCCATCGGCCGC  58 5
 IUJ48_05945 NONE
 IUJ48_05940 NONE
 IUJ48_05935 NONE
 IUJ48_05930 NONE
 IUJ48_05925 1261103 .. 1261143 - -14.1  -4.08692   GAAGTCTCCTGAAAA TG-CGGG-CGGAAGACGGG ACCGG CCCGTCATCCGCCCCGGCA AGGCTAGAAGCGGGA  93 29
 IUJ48_05920 NONE
 IUJ48_05915 NONE
 IUJ48_05910 NONE
 IUJ48_05905 NONE
 IUJ48_05900 1254227 .. 1254251 -  -4.8  -3.52079   CAAGACCCCACAGAA          CGCGCGCGCC TGGTC GGTGCGCACC          GACCGCTGGCGCTAC  52 312
 IUJ48_05885 NONE
 IUJ48_05880 1249289 .. 1249344 -  -6.8  -3.53811   GTCAGGGGGTTGAAA GCCGCCAGTGTACAC-CTGTACGTACA GCA TGTACGTACAGGGTCTTCCCGTGTGGC GCCAGCGCGACGTCC  57 51
 IUJ48_05875 NONE
 IUJ48_05870 NONE
        pdxA NONE
 IUJ48_05860 1244998 .. 1245011 -  -9.5  -3.28712   CGCGCCCGCCGACAA               GGGCG TTGG CGCCC                GCTAGCCGCCAGGAG  62 41
 IUJ48_05825 1238904 .. 1238919 -  -8.2  -3.29511   TTGAGGCCTTCAGAA              GCCGGC GGCG GCCAGC               AGCCGTGGCAGGACC  59 4
 IUJ48_05815 NONE
 IUJ48_05810 1236875 .. 1236906 - -16.6  -3.53091   ACCGGCGGCGCGAAA      CGGCGTCA-GGGCCC GGC GGGCCGGTGACGCCG      TCAGCCGCCGCGCGG  91 57
 IUJ48_05800 1235124 .. 1235147 - -15.3  -4.18697   AAAAGCACTGGAAAA          GGCCTGGCG GTCACT CGCCAGGCC           TTTGTCATTGTGGGC  95 133
 IUJ48_05790 1234069 .. 1234091 -  -4.8  -5.54192   AGCAATGCAAAAAAA           GCAGTGCAAA AAA CCTGCAGTGC           GAGCGTGAAATTATT 100 301
 IUJ48_05775 1232793 .. 1232814 -  -5.7  -3.06183   CGCAGCTGCAGGGAA           TCCTGCGGG CGGG CGCGCAGGC            CGGCGCCTGGCGTCT  48 223
        acpA NONE
 IUJ48_05760 1229665 .. 1229680 -  -4.6  -3.68836   AGATCCAGGGAAGAA              GAGCGA ATTC TCGCAC               GCCGCCGGGGGACCT  58 51
        mnmH 1228518 .. 1228547 - -15.1   -3.5394   AAACGGGCGCGGAAA       GGCCGCATTTCCC GGCG GAAAAATGCGGCC        TTTAAGAAAATTCTT  86 77
 IUJ48_05750 1224492 .. 1224512 - -13.9  -2.51815   CTCAAGGACGAAGAG            GCCCGCTGC AAG GCGGCGGGC            ATGAGCAACTGGCTG  65 453
 IUJ48_05730 1216543 .. 1216584 -  -4.2  -2.78384   GGTTGTCCGAGGAGA GGCCG-GCC-GGCGGGGCGC TTGG GCGATCCGCGTGGCGCCGCC GTCACCACATCTTGC  42 27
 IUJ48_05725 1216040 .. 1216065 - -12.5  -5.03314   TCCAGGCGCAAAAAA         CCCCGCGGAAC GTGA GTCCTGCGGGG          TTATGGCGGGCCTGC 100 130
 IUJ48_05720 NONE
 IUJ48_05715 1214001 .. 1214028 -  -8.2  -3.16191   CGACAGGCGCAGCAA        CGCGTGCCGGCG CAGT CGCCGGTCGGCG         TCGGACAGGCTCGGG  57 123
        ccoS 1212932 .. 1212946 -  -2.8  -3.19602   GGGTCGATATGAATA               TGGGAT TCG ATCCGA               ATCATCCGCGAACCG  45 27
        ccoN NONE
        ccoO NONE
 IUJ48_05690 NONE
        ccoP NONE
        ccoG NONE
 IUJ48_05675 1207696 .. 1207719 - -14.6   -4.1552   CAGGCTGGTAAGAAA          CCCGCAGAAC GCAA GTTCCGCGGG           TTTTTTCTTTGGCGT  95 110
 IUJ48_05670 1205412 .. 1205427 -  -3.2   -4.6635   AAATCGGCAAGAAAA              GACTCA CCCC TGCGTC               ACCCTCTGCCACCAG  72 142
 IUJ48_05665 1204956 .. 1204973 -  -8.3  -3.64912   GAGCCACAGACATAA             GCCCCGC ATCA GCGGGGT              TTTTTTTTCGCCCGC  65 69
 IUJ48_05625 1197055 .. 1197080 -  -2.4  -3.53224   GAGCGCCGGGGCAAA         CGCCAGCGCG AACGAG CACGCCGTCA          GGCGCAGCAGGTGAA  47 59
 IUJ48_05620 NONE
 IUJ48_05615 1195625 .. 1195657 - -26.5  -3.05384   TTGGCGGCCAGGCAA      GAGAAAGGGCCGCGT GAT ACGCGGCCCTTTCTC      TTTGGTCGGCATTTC 100 75
 IUJ48_05595 1189845 .. 1189859 -  -8.5  -3.25942   ACTCCTCGATAGGAA               CGGCG TCTGG CGCCG               CGGTACGGAAATCAG  59 37
        nosZ NONE
 IUJ48_05585 NONE
 IUJ48_05580 NONE
 IUJ48_05575 NONE
 IUJ48_05570 NONE
 IUJ48_05565 1183040 .. 1183052 -  -6.2  -3.63895   TGCAACTATGCGAAA                GCGC ACTGG GCGC                TTGCCGACGAGAATC  57 289
 IUJ48_05550 1179986 .. 1180006 -  -6.7  -4.58663   ACCAGCTTCGAAAAA            CTGGGCGCC GTG GGCGTCAAG            ACCACGCCGGCCGAA  78 185
 IUJ48_05540 1178122 .. 1178149 - -19.2   -4.4078   GGCCTGCAATGAAAA        GGGCGTCCCGGCC GAT GGC-GGGACGCCC        TTTTTCATGGCGCGG 100 60
 IUJ48_05495 NONE
 IUJ48_05490 NONE
 IUJ48_05485 NONE
 IUJ48_05480 NONE
 IUJ48_05475 NONE
 IUJ48_05470 1163004 .. 1163045 -  -2.7  -3.14463   AATCGCTGGGAGCAA TCGCTGCCGCGCCGCATGTG GCT CGAACGCGGCGCCGC-GCTG GTGCGGGCCAGCCAT  43 331
        hpxZ NONE
 IUJ48_05455 1161412 .. 1161433 - -14.4  -5.64274   TTATCCACAAAAAAA           GCCCCCCG GCTTGG CGGGGGGC            GTGATCGCCCGGAGG 100 96
 IUJ48_05445 1159165 .. 1159190 -  -5.9  -3.40403   GCTGGGCGAGCACAA         CCGCCGCGTGG TGTG CGCCGCGCCGG          CCTATTTCGCGCGCC  55 445
 IUJ48_05435 NONE
 IUJ48_05430 1156627 .. 1156658 - -17.3   -3.5774   AGCCAACTCCCGAAA      GCGCGGCCACGGGC TGAAG GCCCGCGGC-GCGC      AGTCGAGGTTTTACC  93 103
 IUJ48_05425 1155835 .. 1155883 -  -7.3  -3.36878   GCCAGGGACCGAGAA GGGAGGCTGCGCGATTGCGGAC GGCATT GTCCGTAGTCTCGC-GCCCGCC GGCCTCTTTTTCGCG  58 460
 IUJ48_05405 1153812 .. 1153825 -  -8.1  -3.25823   CTGGCGCGAGAGGAA               GGCGT TCTC ACGCC                CTGGAGAGGGGGAAG  57 215
 IUJ48_05400 NONE
 IUJ48_05395 NONE
 IUJ48_05390 1152193 .. 1152205 -  -4.8  -3.70848   AGAGACTCAATACAA                CGTG CTGGC CACG                CGCGCCGGCAGGTCG  58 4
 IUJ48_05385 NONE
 IUJ48_05380 1150946 .. 1150962 -  -4.3  -2.93393   CGTCAGGGCAGAAAG              GGCAGCA GGA CGATGCC              ATGGACCAGGATGAA  44 96
        mutS NONE
 IUJ48_05370 1146810 .. 1146821 -  -7.2  -3.56092   TGACGACTCTTGAAA                CCCC GTCA GGGG                 AAACCAGAATCCAGG  59 199
 IUJ48_05365 1146486 .. 1146516 - -19.9  -3.53012   GCGGCTGCGCGCAAA       CAAAAACCCCGGC GCGAG GCCGGGGTTTTTG       TTTGCCGTGATCAGC 100 59
 IUJ48_05340 1141803 .. 1141818 -  -8.2  -4.11216   CGCCCAGCGGGAAAA              GCCCCC TTGC GGGAGC               TCTGGCCCGCGCTTG  72 139
 IUJ48_05335 NONE
 IUJ48_05330 1140150 .. 1140162 -  -3.4  -3.84674   AGTGCATCAGAACAA                CTTG ATCTA CAAG                GGATACCGGCTGACG  58 314
 IUJ48_05310 1136859 .. 1136879 -  -2.3  -4.26076   CGACGCGCAGGAAAA            GGCGCGGGC CCA GCCCTGGCG            CGTCGAGGATGCGCC  65 193
 IUJ48_05290 NONE
 IUJ48_05285 1133130 .. 1133155 -  -8.1  -3.21258   ACGAAGGGAATGGAA         CGGGGCCGGCC CGAA GGCCGGCGACA          GGCCCATCATGCCAG  57 32
 IUJ48_05280 NONE
 IUJ48_05275 NONE
 IUJ48_05270 NONE
 IUJ48_05265 1129942 .. 1129961 -    -2  -3.96148   TCGCCCGACGACAAA            CCGGTG GAGGTCGA CGCCGG             CATCGTCTCGGATTG  58 268
 IUJ48_05250 1127385 .. 1127417 - -14.3  -3.35278   CGAATCAGAGACGAA     GCCAGTGCCTATCG TGCGTG CGATAGGCAC-GGC      GTGGCGCGATAAGGC  80 67
 IUJ48_05245 1126332 .. 1126389 -    -9  -3.05384   GCCTCGGTGAGGTAA TGCTCGCGCGCCCGCCGAACCCTGGCGC CGGA GCGGCGGGGTTCGG-GCGCGCGTAA-CG GCAGGGGGGCTGCCG  57 42
 IUJ48_05240 NONE
 IUJ48_05235 1122935 .. 1122950 -  -7.5  -3.90744   GCGCCGCCGAAACAA              CGGCC TAGCGT GGCCG               GGTTGCGCCCGCGCT  67 39
 IUJ48_05220 1120668 .. 1120681 -  -8.1  -2.78495   TCACGATGAACAGCA               GCTGC ATGC GCAGC                GAAACCCGGGCAAGG  51 84
 IUJ48_05215 NONE
 IUJ48_05210 NONE
 IUJ48_05205 1115570 .. 1115590 -    -4  -3.56273   CGCACCATCAGACAA            TTCCGG TAGTGCGAG CCGGAA            TACAGGGACGCTTCG  53 50
 IUJ48_05200 1114680 .. 1114692 -  -9.1  -3.12351   TCTCGGTATATCGAA                GCGTG CGT CACGC                CCGACGCGTGGATCA  60 38
 IUJ48_05195 NONE
 IUJ48_05190 NONE
 IUJ48_05185 1112451 .. 1112464 -  -4.5  -3.54743   TATCAGCAAGCAGAA               GACGT ATTG ACGCC                GGCCGGGCTCGGCCT  51 67
 IUJ48_05180 NONE
 IUJ48_05175 1109220 .. 1109235 - -11.8  -3.01712   CGCCCTGGTGGAACA              GGCCGC CGCC GCGGCC               GCCAGCATGCGCGAG  68 75
 IUJ48_05165 NONE
 IUJ48_05160 1103175 .. 1103217 -    -7  -3.64703   TGCTGTGGATCGAAA CGCGTCGCAAGCGCGCCGACC GCAG GACCGGCGCGA-TGC--CGCG GCAGAGGCTGGATAC  60 514
 IUJ48_05130 1096862 .. 1096884 -    -9  -2.78384   CGGCCGCGGACGACA           TGGGTCGGCG CGG CGCGGGCCCA           AGGTTGTGCCTTGAA  53 122
 IUJ48_05125 1095987 .. 1096024 - -24.9  -5.46629   AACACTCGAAAAAAA   CGAAGGCCCCGCCCGCC GGTA AGCGGGTGGGGCCTTCG    GGTCTTAGCTCTCTT 100 122
 IUJ48_05120 1093913 .. 1093923 -  -2.4  -3.57561   CCCCAAGTTCCGAAA                 GGGC GCG GGCC                 TTGGCGCCGTTTTGA  50 118
 IUJ48_05110 1090962 .. 1090977 -    -6  -3.32963   AGCGGCATTGTAGAA              CCGCTG GCGT CGGCGG               AACCGTCGGAATCAA  53 124
 IUJ48_05105 1090264 .. 1090280 -  -6.5  -5.75342   CCGCCCGAAAAAAAA              GCGCC GATGCAT GGCGC              TTTTTTTCGGGTGCT 100 54
 IUJ48_05075 1086736 .. 1086755 -  -9.2  -3.52102   AGTTGATGCAGATAA            GCGCGCCA GCGG TGGGGCGC             GGCGCCTTTGCGGAA  65 160
 IUJ48_05060 NONE
 IUJ48_05055 NONE
 IUJ48_05050 1083565 .. 1083578 -  -4.5  -4.74706   GGCAAGACTGAAAAA               CGG-GC TGA GCACCG               AGCTGGAGAGGGCGG  79 291
 IUJ48_05040 NONE
 IUJ48_05035 1081501 .. 1081518 - -11.3  -2.62515   AATTCCTTTACATTA             CAGGCAC TTAG GTGCCTG              TTTTGTTTTTTCGGG  62 15
 IUJ48_05025 1079676 .. 1079696 - -16.1  -3.27704   AGCCGCCAAACGCAA            CCGGCGGCC AGC GGCCGCCGA            TTTTCCCGCATGCCG  86 53
 IUJ48_05010 1077216 .. 1077243 -  -9.9  -2.74192   CAGGCGCCAAGACCA       GCCT-GGC-GCCG GGGA CGGCGGCCAAGGC        AGCCCGCGCCGCGCC  56 41
 IUJ48_05005 NONE
 IUJ48_04975 1068655 .. 1068676 -  -2.1  -3.55622   GCGAAGTCTTCGAAA           TGCGCTCCG TGCT CGAAGGGCT            GGCCGTGCGCAATGC  50 427
 IUJ48_04965 NONE
         ggt 1065591 .. 1065608 -  -4.7  -3.31144   CCGCCAGCCCTAGAA             GCCGACC GCCT GGCCGTC              GCGGCGCGAATCGGA  51 2
 IUJ48_04955 NONE
 IUJ48_04950 1062428 .. 1062444 -    -3   -3.8591   GCGCACAACGAAGAA             TG-TGGC GGAC GCCATCA              AGCGCTTCGGCATCG  56 318
 IUJ48_04935 NONE
 IUJ48_04930 1060162 .. 1060217 - -12.5  -3.20307   GGAAGACCAGGAACA GCCGGCTCGCCAGGGTGCGCGGCC-AGC GGC GCCAGGCCGGG-ACCCGGGCG-GCCATC TACGTGGCCTCGGAC  71 25
 IUJ48_04925 1058821 .. 1058848 - -22.8  -3.44622   TAGTTTCAGAAGCAA        CGCCCCGCGATG GCGA CATCGCGGGGCG         TTTTTCATCTGGAAA 100 68
 IUJ48_04910 NONE
 IUJ48_04905 NONE
 IUJ48_04900 NONE
 IUJ48_04895 NONE
 IUJ48_04890 NONE
 IUJ48_04885 1049572 .. 1049603 - -15.8  -4.32067   CATTGGACAAAAGAA      GCCCCTGCCGCCGG CGTG CCGGCGGCAAAGGA       TGAAGCAAGCGGTTG 100 62
 IUJ48_04880 1048526 .. 1048538 -  -4.7  -2.50074   CGCGTCAGAACAGAT                GGCGG ATG CCGAC                CGAGGTCTGCAGCGT  43 2
 IUJ48_04845 1043175 .. 1043192 - -11.3  -4.54727   GCGCCTAAAGGAAAA             GGGCTGT AAAC ACAGCCC              TCTCTTGCCTGACCG  91 43
 IUJ48_04835 1041970 .. 1041981 -  -3.6    -4.371   TTGACGAGACGAAAA                CGCA CCAG CGCG                 TGTTGTTGACCGTCT  67 522
 IUJ48_04780 1033749 .. 1033786 - -17.7  -2.52464   GCGCCCCGCAAGGCA   GGATGCCCCGCGCATCA GCGA CGATGCGCGGGGCCTCT    TGCCCTATGGCTGGC  83 44
 IUJ48_04775 1032122 .. 1032159 -  -6.2  -3.14881   CAAGGCCTTGATGAA  GGCGG-GCGGCGTGATCG CCTG CGA-CGCGCCGCGCCATC   CATTTCCGGCCATGC  50 142
 IUJ48_04750 NONE
        bioF NONE
 IUJ48_04690 1016232 .. 1016245 -  -3.7  -2.66316   GGCTGGAGCAGATCA               GGTCG TAGC CGCCC                GGCAGGCTGTCGGGG  42 351
 IUJ48_04675 1012997 .. 1013027 -  -9.1  -3.68222   GTTCAACTGGAAGAA      GAACCTGGACGACG CCAC CATCG-CCAAGTTC       CAGCGCGAGCTGGGC  67 458
        queF 1010849 .. 1010868 -   -15  -5.93809   CGCTTATAAAAAAAA            CGTCCGCC TTCG GGCGGACG             AGGCTTTTTTTACTG 100 35
 IUJ48_04650 1007410 .. 1007427 - -14.1  -3.37796   TCGCAGCAGGCAGAA             CGCCGCC CTCG GGCGGCG              TTCTGCTTTGGGGCC  80 91
 IUJ48_04585  991149 ..  991167 -  -5.8  -3.44146   GGCGGCCAGAAGCAA             CGCGTGGC GCT GGCGCGCG             CGCTGATGCTCAAGC  55 312
 IUJ48_04540 NONE
 IUJ48_04535 NONE
 IUJ48_04530  980922 ..  980957 - -27.6   -4.4078   GCGGCGCAAGCAAAA    CGCCCGGCGCGGCCTC TCCG GAGGCGGCGCCGGGCG     TTTTGCTTTCTGCCA 100 67
 IUJ48_04510  976491 ..  976526 -  -7.4  -4.00469   CCAAGATCAAGGAAA    CCTGGGAAGGCAACGGC TCG GCCG-TGCCGACCCTGA    CCGGCCCGGCCTTCG  69 139
 IUJ48_04470 NONE
 IUJ48_04465  965983 ..  966006 -  -5.9  -2.78463   AGCTGCGCGAGGACA          GCACCGTCG GGCTGG CGGCGATGC           TGCGCGCCAACGATA  46 522
 IUJ48_04455 NONE
 IUJ48_04450 NONE
 IUJ48_04445  962589 ..  962602 -  -5.3  -4.57073   TAGTGTCTGCAAAAA               TGACA GCGC TGTCA                ATTGTGATGCGGGTT  74 171
 IUJ48_04440 NONE
        xylF NONE
 IUJ48_04430 NONE
 IUJ48_04425 NONE
 IUJ48_04420 NONE
 IUJ48_04415  955272 ..  955284 -  -3.3  -2.85351   CGCTGGGATACGAGA                TCGTG GTG CGCGA                CTCGACCCGCGCGCC  41 60
 IUJ48_04380  947153 ..  947194 -  -6.4  -4.08216   GTAGCGCGTGTAAAA GCGTGGCGCTCAAGCCGCG GCAGG CGCGGCTGGATGGCG-CGC GTCGGCTCGATTCCG  68 111
        rpmB NONE
        rpmG  946340 ..  946358 -   -16  -5.27335   TCGGCCAAACAAAAA             GGCCCTGC GAT GCAGGGCC             TTTTTGGGCTATCCG 100 54
 IUJ48_04365 NONE
 IUJ48_04360 NONE
 IUJ48_04355  942082 ..  942103 -  -7.9  -3.02144   CCAGGTCTGGGAAGA           CGAGCTGGCG GCG CGCC-GCGCG           ATGGGCGGCGACCTG  52 252
 IUJ48_04330 NONE
 IUJ48_04325  936929 ..  936962 - -24.7  -5.40072   GCGCGCGCAAAAAAA     GAAAGGGCCCGCCCC ATGC GGGGCAGGCCCTTTC      CGGCTTGACCGGATA 100 52
 IUJ48_04320  936308 ..  936334 -  -5.1  -3.01712   GGCTTGGTGTGAACA        GGCCCTAGGCGGC GAT GCCGCC-A-GGCG        TTTCCCGGTCGTGCG  46 3
 IUJ48_04315  934983 ..  935027 - -11.2  -4.59773   CGCGATGGCGAAAAA TGGGTGAACCGCCCCCGCGC GCCAG GCGCGGGGGCGGCCAAAACC CCTGATTATAGGAGG  93 43
 IUJ48_04310 NONE
 IUJ48_04305 NONE
 IUJ48_04300  930485 ..  930505 -  -2.3  -3.12803   CATTCATAGTGAAGA            GGGGGCGGC GAG GGCGCCGCT            GATGGGATTAGTTTA  42 85
 IUJ48_04295 NONE
 IUJ48_04290 NONE
 IUJ48_04285 NONE
 IUJ48_04280  926978 ..  926990 -  -6.9  -2.96899   GCGCAAGGAAGGAGA                CCGCG GCG CGCAG                GTGGCCCTGGAGGGC  48 441
 IUJ48_04265  923437 ..  923449 -  -6.2  -2.62184   CTCGCCGCCAGATGA                CGGC CCGCC GCCG                ATGCCCGTCAGGTGT  45 33
 IUJ48_04255  921612 ..  921631 -   -10  -3.50929   CAAAGGACAGCATAA            CAG-CGGCG GGC CGCCGGCTG            GCGCCGCCGGGCCGG  69 42
 IUJ48_04250 NONE
 IUJ48_04245  920399 ..  920417 -  -7.3  -3.61356   AGCATGGAGCTGAAA             GCCCGGC TCGGT GCCGGGG             AACTGGATCTGGCCC  60 484
 IUJ48_04235  918989 ..  919003 -  -5.6  -3.61268   GATTGAAGTTGGAAA               TCGCCA GGA TGGCGT               CGTGAGCGAGAGTGC  57 110
 IUJ48_04230  918076 ..  918114 - -21.3  -3.08133   CAGGCAGTTATTCAA  GAAGAAAACCCCGCAGGC TGAC GCCTGCGGGGTTTT-TTC   ATTGGCGGTTGCTTT 100 111
 IUJ48_04190  909614 ..  909635 -  -9.5  -2.72379   CCAACGCTTCAATGA           GACCGACACG ATG CGT-TCGGTC           CCGCCCGCGACCCGC  56 82
 IUJ48_04180 NONE
 IUJ48_04175  904040 ..  904057 -  -3.3  -3.44051   GGTCGAGGACCAGAA             GTGCAGC CTGC GCCGCAA              CTTCGAGCGCACCAT  49 443
 IUJ48_04160  901919 ..  901943 -  -9.2  -3.04144   GGCCGAGCGCGAATA          CGCGCAGGTG GTGCG CACCCGCGCC          ACGGTGCCGCCGTTC  55 479
 IUJ48_04130 NONE
 IUJ48_04125  895422 ..  895443 -  -6.5  -2.87564   GCAGGCCGGGAGAGA           GCCA-GGCGC GCC GCGTCATGGC           TGGCCGCCGATCAGG  49 19
 IUJ48_04120 NONE
 IUJ48_04115 NONE
 IUJ48_04110  892314 ..  892331 -  -3.3  -3.53012   GCCGGGGGCGCGAAA             GGCACGC AGCG GCATGAC              ATCGAACTGGCCAGG  49 445
 IUJ48_04095 NONE
 IUJ48_04085 NONE
 IUJ48_04080  888227 ..  888249 -  -6.4  -3.72576   GGGGCCGCTAGCAAA           TGTCTTATAT CTT ATATAAGACT           TGGGTCGATAGACGT  62 246
        acnB  885507 ..  885530 - -19.6   -4.4078   CCGCGCCAATGAAAA          CGGCCCCGGA TCAC TCCGGGGCCG           TGTCGCAGGCGAGCC 100 54
 IUJ48_04070  884471 ..  884484 -  -3.1   -4.2461   ATCCGCAGGAAGAAA               TGGACG GGC CG-CCA               TTCGCGGTGGTCGAC  65 273
 IUJ48_04060 NONE
 IUJ48_04055 NONE
 IUJ48_04050  881722 ..  881769 -  -5.5  -3.59738   TACGATATCGCGAAA TCCCGGCATGC-ACGCCGCGC GGCCATGG GCCCGGCATTGC-CGCCGGGC CCATGGCCGCTCTCC  57 55
 IUJ48_04045  880677 ..  880708 -    -7  -3.44051   GGCTCACGACGACAA      GGCTGGCGGCCCGC GAGT GCGGGCCGACCGTG       GCAAGCTGATCGTGC  58 237
 IUJ48_04030 NONE
 IUJ48_04025 NONE
 IUJ48_04020  875648 ..  875675 - -16.4  -3.01712   GTTCCTGGCGCAACA        GGCCTACCCCTT CCGC AAGAGGTAGGCC         CGCGAGGCAGGCTTG  85 52
 IUJ48_04010  873992 ..  874011 - -16.4   -4.7497   GCCAGGCAGCAAAAA            GGCGCCGC GATG GCGGCGCC             CTGCGCAATGGTCGG 100 58
 IUJ48_04005  873506 ..  873519 -  -2.4  -3.83724   ATTAGAGAATCTAAA               GATG CTAATC CATC                TTTAGGGATACTGAA  55 56
 IUJ48_04000  872787 ..  872840 -  -7.3  -3.02144   TCACGTTCCGCAATA CGCCG-GCCGCCGTCCGCA-AAGCC ACGTCG GGCCAATGAGGCCGGCGGCGCGACA GAATCACGGCCAGAC  54 29
 IUJ48_03980  868749 ..  868770 - -14.5  -3.62046   GCATGCGTCCAAGAA           CCGAAGACC GAAC GGTCTTCGG            TTTCTTTTACGCTGT  87 32
 IUJ48_03965  864871 ..  864884 -  -2.3  -3.90744   TGCTCGGGGAAAGAA               TCGAC GCAC GGCGA                GCGCTGGATCTTGGA  56 397
 IUJ48_03950  862461 ..  862472 -    -3  -3.71913   TGCATAGGTAAAACA                TCAT GTTT ATGA                 GGATCACGCGGTTGC  54 77
 IUJ48_03945  861439 ..  861465 -  -2.8  -4.03234   TTGTGGTGAGAGAAA         TTGCGCCGGGAG TCA CTCCAGAGGCAT         TGCAGGAAAGATCGG  58 170
 IUJ48_03925 NONE
 IUJ48_03920 NONE
 IUJ48_03915 NONE
 IUJ48_03910 NONE
 IUJ48_03905  854096 ..  854111 -  -3.2  -3.72576   TGGTTTTCCATGAAA              CCCTCA GCCT TGAGGT               TTCGCCACGGGTCTC  54 13
 IUJ48_03900 NONE
 IUJ48_03895  852623 ..  852655 -  -2.6   -4.4267   GCGTAAAACGGAAAA     TGGG-ATCAGGCGGG GTGG CCGGTCAGATGCCCA      GATAAGCCTTTCGTA  65 15
 IUJ48_03890 NONE
 IUJ48_03885 NONE
 IUJ48_03880 NONE
 IUJ48_03875 NONE
 IUJ48_03870  848441 ..  848462 -  -7.2  -3.55444   CGCGCACCTCTGAAA           TGGCGCGC CGCATT GCGCGTCA            CCCCGCGGGCGCGCT  60 191
 IUJ48_03745  820397 ..  820412 -  -5.4  -3.53343   AAGCTGGTCGCCAAA              TCGTCC TCGT AGACGA               TGGCAGTGGGAACCC  53 91
 IUJ48_03720  817024 ..  817036 -  -6.9  -3.85698   TTTCCTCGGGATAAA                CCGGC TAC GCCAG                CAGCTTGTAGTGCGA  64 17
 IUJ48_03695  809477 ..  809497 -  -4.8  -3.83998   TCAGTCCAGATCAAA           GCTACTAGA AATG TCTAG-AGC            GAACTCCGGTGCAAC  60 42
 IUJ48_03680  801454 ..  801472 -    -3  -3.90112   CGTCGCGCAAGGAAA             CCGAGGAC TAC ATCACCGG             CCGCTTCGGCTGATC  56 183
         ppx  793445 ..  793466 - -17.3  -4.13767   CGTTGCACGGCAAAA           GGCCCCGGA TATT TCCGGGGCC            TTGTCGTTTTCAGAA 100 35
 IUJ48_03620  786604 ..  786642 -  -4.5  -4.42667   GTAAAATCAGCAAAA  CACCATAGCCCGCACCGG ATAT CCGGCACGG-CAATATTG   CGGAACGCTATGGTG  69 81
 IUJ48_03610  783665 ..  783698 - -10.9   -3.6761   GCGCCGCAAGAAATA     GGACGGGGCATGGGC GGCG GCCCATGCGCTGTTC      CGGGGCCATGGGCCG  74 107
 IUJ48_03600  781756 ..  781782 -  -2.9  -3.30124   GGGCATTCGGGAGAA        CCCGCGCGAACT TGGG AGT-CGAGCCGG         CGGGCCCTTTTACGC  47 35
 IUJ48_03595  780256 ..  780284 - -11.5  -3.09581   TAAAGGTTCAAGACA        GGCCGCCCGCGGC GGG GCGGCGGCCGGAC        GGGGCGAGCCCCCCG  66 58
 IUJ48_03590 NONE
 IUJ48_03585 NONE
 IUJ48_03580 NONE
 IUJ48_03575  775745 ..  775792 -  -8.2  -3.89614   CGCAAGGCGGACAAA GCCGGCTGAGCCGCAGGGCGCCA GGA CGACACCCTGGCGC-CGGCCGTC ACGGCACGACGTCGT  69 24
         tal  768245 ..  768259 - -11.4  -2.52896   TGATCGTGGAATTGA               CCGCCA CCG TGGCGG               CCTACAACATGGTGT  58 129
 IUJ48_03540 NONE
 IUJ48_03535 NONE
 IUJ48_03530 NONE
 IUJ48_03525  763682 ..  763695 -  -3.8  -3.61371   AAATGGCAGCCCAAA               TCGG GCGAAA CCGA                AAAACTCTAGCCACG  53 81
 IUJ48_03460  746418 ..  746451 - -13.2  -3.85909   TCATGGAAATCGAAA     TCGGCATCCTG-CGC ATGGA GCGGCGGGATGCCGA     CCAGGGCGCGCGCCT  86 351
 IUJ48_03410  738448 ..  738479 -    -7  -3.73224   GTATTCGTCACCAAA      CGCGTCCCGAGACG CTAC CGGCGCGCGGCGCG       TGAGCGTAGCCCGGA  62 110
        pbpG  736923 ..  736941 - -14.6  -5.52384   GCCGGACGAAAAAAA             GCCCGATC CAG GATCGGGC             TTTTTCGTGGGCGGG 100 52
        adhP  735158 ..  735179 - -17.3  -4.67048   CCACCGCAAAACAAA           GGCGCCTGC CATG GCAGGCGCC            TTTTTGCAGGGCGAG 100 48
 IUJ48_03370  729834 ..  729862 -  -2.9  -3.16399   TAAACCTAAAATAAT        TGGCGCGGCAACC CGG GGTTTACGCGACG        CGCGCGGGGCGCGTC  43 69
 IUJ48_03365  728489 ..  728506 - -12.7  -6.11644   GCATCCAAAAAAAAA             CGCCCCT CGAA AGGGGCG              CCCAATCTTCGCCAC 100 99
 IUJ48_03360  726837 ..  726856 -  -4.8  -3.11459   AACACCACTAGCGAA            GGCGGCGC AGAA GCGCATCC             GACGTTCGCTTCCGG  47 510
 IUJ48_03320 NONE
 IUJ48_03315 NONE
 IUJ48_03310 NONE
 IUJ48_03305 NONE
 IUJ48_03300 NONE
 IUJ48_03295 NONE
 IUJ48_03290 NONE
 IUJ48_03285  709454 ..  709467 -  -2.3  -3.26471   GCACGGCGAGATGAA               GAACG TGGG CGTGC                AGGAGCCGGGCCGCA  45 247
 IUJ48_03270 NONE
 IUJ48_03265 NONE
 IUJ48_03260 NONE
 IUJ48_03255  703199 ..  703221 -    -9  -2.71364   GCACGCGGTCAACGA           CCGCATCGGC CGC GCCGCCGCAG           CGTTCACGCTGGATA  52 71
 IUJ48_03220  697851 ..  697872 - -12.9  -4.72272   GGCGGGCAGCAAAAA           GGCGGCCCC TGGC GGGTCCGCC            TTTTTTTCTTTGCGC 100 51
 IUJ48_03205  693968 ..  693994 - -18.7   -4.7497   CCGACTCATGAAAAA         CGGGCCCCGCA TTCAT CGCGGGGCCCG         TGCTTGCGGTTCTGG 100 61
        phnF  686647 ..  686660 -  -9.5  -3.53012   CGCGGCCGCCGGAAA               GCGGC CGCA GCCGC                GCTCAACTGTCGTCC  65 28
 IUJ48_03155 NONE
 IUJ48_03150 NONE
        phnN  683898 ..  683923 -  -9.7  -3.14132   GCTGCCGCCCATCAA         CCTGATC-CGCC GCC GGCGCGAGCAGG         CGCTGGCGGCCGAGG  60 150
 IUJ48_03135  681073 ..  681090 -  -5.5  -2.57211   ACCCCTTGCGATAAG             GCCGG TCTCGTCG CCGGC              TGGATGGAAAATCGG  45 42
 IUJ48_03130 NONE
 IUJ48_03125  679448 ..  679486 -  -9.7  -3.53012   CGGTGCTGTGGGAAA  TCATC-CGCA-GCTTCCGC TAT GCGGAAACCTGCGCGGTGA  TGATCATCATCGTCG  65 130
 IUJ48_03105  676134 ..  676166 -  -4.2  -3.18912   GCATCGAGGGAGGAA     GGCATTGATTCAACC ATAG GGTTGAATATA-GCC      TGCCGTTCATATCGA  47 62
 IUJ48_03100 NONE
 IUJ48_03095  674758 ..  674787 - -14.3  -3.13522   ACTCCTTGATCAATA       CGCGCCGCCATGCC GTC GGCATGGC-GCGCC       ACCGGAGCGGCGAGC  76 493
        infA NONE
 IUJ48_03085  673516 ..  673536 - -12.5  -3.57792   GCATCGAGCGCGAAA            TGGCCGAGC AGA GCGCGGCCA            ACCGCGCCTACCGCG  74 474
 IUJ48_03065 NONE
 IUJ48_03060 NONE
 IUJ48_03055  667640 ..  667685 -  -6.7  -2.78384   TCCCGCCCGACTACA TCGACATCCACCCGCA-CGGCA AGG TGCCGGCGCTGGTGCACGACGG GGTGCCGGTGTTCGA  46 456
 IUJ48_03035 NONE
 IUJ48_03030  664996 ..  665024 -  -2.9  -3.33744   GCGGCGTTGAAAAAG        GGGTGCGTAGCGC AAA GCGTAACGCAACT        GAAATTTCGCGTGTC  47 52
        yfcF NONE
 IUJ48_03020  663749 ..  663763 -  -8.6  -2.54523   TTACACCTGAATGGA               TGTTGC ATC GCAACA               TGGGGACGGTTGATG  53 98
 IUJ48_03015 NONE
 IUJ48_03010  660263 ..  660282 - -16.4   -3.4285   TGATGCAACGGACAA            GGCGGGGC CGGG GCCCCGCC             GCTCATTCACGGCCT  90 51
 IUJ48_03005 NONE
        fabI  657856 ..  657877 -    -8  -3.01712   CGGTGCTGGGCAAGA           TGCACCTG AACCCG CAGGCGCA            GCCGGTGCCGGGCGC  52 425
 IUJ48_02990  655211 ..  655230 -   -15  -4.72272   CCGCGCGATGAAAAA            GCCGCTCC GAAA GGAGCGGC             TTTTTTTTCATGGGC 100 70
 IUJ48_02970  649994 ..  650007 -  -3.7  -2.78679   GTGGCGGACGGAAAG               CGGAC GTGG GGCCG                GGCGCAGACCCGGGG  43 91
 IUJ48_02965  648822 ..  648853 -  -8.6  -4.82901   CGGGCTGGACAAAAA      GGCCGTGGTCG-ACG CCG CGCACGAGCTCGGCC      TGGCACTGTTCGTGG  91 409
 IUJ48_02940  642903 ..  642953 -  -8.9  -3.53563   AGAGGGCGGCGCAAA GCCGCCCGGCGAGTGT-ACCCGCGG TGG CCGGGCGTGAC-CTCGGCAGGGGGC GCCGCGGACCGGTGC  62 71
 IUJ48_02935  641285 ..  641308 -  -5.1  -3.54424   GGCCACGCGCGGAAA          TGCCGCGCC GCGATG GGCGTGGCT           ATTGGTTCCGGGCGA  53 225
 IUJ48_02930  639652 ..  639670 -  -8.8  -3.50853   TTCGCGCAAGTACAA             GGTCGCCT ATG ACGCGACC             GGCCCGCTTCTGAAC  61 440
        ubiD  637534 ..  637561 -   -20  -4.07568   CTGCGTCCCCCAAAA        GAAAACCCGCCG GATA CGGCGGGTTTTC         TTTTGGGGCGGGGGA 100 72
        cobA  629737 ..  629750 -  -2.3  -4.15222   ATCGCCGGCAAGAAA               GTCAC CGTG GTGCC                CATCCTGCGCGCCGG  61 490
 IUJ48_02850  624028 ..  624060 - -12.6  -4.07687   AGGGGCTGGCGAAAA     GGGCGGG-GCGGCCG GCGA CGGCGGCGCCCGCGC      AAGCGAGGACGGCAG  85 94
        queA NONE
         tgt  621448 ..  621471 - -11.8  -3.49114   CATATCAGATGACAA          TCCAGACGCT GCCC AGCGTCTGAA           AGACGATATTGAAAC  69 259
        yajC  620291 ..  620322 -  -9.3  -4.42619   TAAGAGTGGAGAAAA      GGCCGCCCG-GGCG GCTGG CGCGACGGGCGGCG      GGGCGGCTGCCGTCG  83 78
        secD NONE
        secF  617353 ..  617370 -  -9.8  -5.60993   CCGCCCATAAAAAAA             CCCGCC ACAGCG GGCGGG              TCTTGCGGGGCGGGA 100 47
 IUJ48_02810 NONE
 IUJ48_02805  616474 ..  616489 -    -9  -3.06796   GCCTATGGTAGCGAA              TACGGC GGCA GCCGTA               CCCGTACACCCAGTG  57 82
 IUJ48_02800 NONE
 IUJ48_02795  614996 ..  615016 -   -14  -4.42238   GGACTTCAATGAAAA            TGGCCGCC ATGCA GGCGGCCA            TTTTCATTGGCGGCA 100 45
        miaB NONE
 IUJ48_02780 NONE
        ybeY  610957 ..  610972 -  -5.4  -2.90219   GATAAGGGTCAGACA              TCGTCC GGGA GGACAA               GTTATGGAGGGGCCA  45 165
 IUJ48_02770 NONE
         lnt  608341 ..  608354 -  -4.5  -3.72695   AGCGCTGGCAGTAAA               GGCACG GCA CG-GCC               GGTAAAGGCGTGGCC  56 110
 IUJ48_02755 NONE
 IUJ48_02750  606685 ..  606698 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CATACTCAACTACTG  52 80
 IUJ48_02745  606571 ..  606586 -  -8.2  -4.84529   CTATAAATGCAAAAA              GCCCCG AGGA CGGAGC               TCTTGAAAGGCACTG  91 54
 IUJ48_02740 NONE
 IUJ48_02735  606233 ..  606246 -  -8.1  -2.80398   TAACCAACTGAACTA               CCGCT CCGC AGCGG                CTTACTTCACTTCTG  52 94
 IUJ48_02730  606060 ..  606076 - -11.5  -5.37593   GCGCAAAGCAAAAAA              GCCCCGG AAT CCGGAGC              TTTTGGCGGGCGCCT 100 112
 IUJ48_02725  604268 ..  604288 -  -3.2  -3.65046   GGCGGATCGTAAGAA            GCTGCGCA GGGTT TGCGCAAT            CTCGGGCCTGTCCGT  51 179
        bioB NONE
 IUJ48_02715  602103 ..  602116 -  -3.1  -4.11216   GGTCGACGTCGAAAA               CGATA TCAG CATCG                AAATGGTGCAGCCCG  61 191
 IUJ48_02700  599607 ..  599631 -  -2.8  -6.15828   GCCAGCAAAAAAAAA          CCGCAGAGAA TTCAC TTCTCCGCAC          TCTCCCCCGGCAACC 100 12
        moaC NONE
 IUJ48_02680 NONE
 IUJ48_02675 NONE
        moaB NONE
 IUJ48_02665  591061 ..  591086 -  -5.3  -3.15427   AACACGCCCGAGGAA         CTGGCGGCG-GC CGA GCGCTACGCCAG         CCAGTGACGCAGGTC  47 17
 IUJ48_02645 NONE
 IUJ48_02640 NONE
        fdhF NONE
        fdhD NONE
 IUJ48_02625 NONE
 IUJ48_02620  580083 ..  580114 -   -13  -5.29885   AACGGAAAAAGAAAA      GGCGCG-GGCTGCCA ATG TAGCAGCTTCGCGCC      CCGTGGGCGGCGGAC 100 70
 IUJ48_02615  578830 ..  578843 -  -5.9  -5.14563   GCGGGCATGAAAAAA               CGGCC GTGA AGCCG                TTTTTTTACCGTGAG  90 56
 IUJ48_02595 NONE
        murI  575089 ..  575125 -  -5.5  -4.14598   CGCAATCAAAGGAAA    CGGAATCGGCCCGTCAG CAC CAGCCGGGCGGCACCCG    CGTGGCGGTCGCCGG  66 2
 IUJ48_02585 NONE
 IUJ48_02580  573785 ..  573806 -  -6.5  -3.56099   GACAACGCCTGCAAA           TG-GGCCGCG CGG CGCGTCCGCA           TCGGCGCCCAGGCGA  57 323
 IUJ48_02560 NONE
 IUJ48_02555  569789 ..  569801 -  -4.7  -2.79831   CGAACTTCCATCATA                CGACG GGG CGGCG                TGGGCTAGCGCATGT  45 30
 IUJ48_02550  568428 ..  568443 -  -6.8  -3.14132   CGGGCGCCGCATCAA              CGC-GCC GCT GGCTGCG              CCGTTACGCGCCAGA  51 6
         azu NONE
 IUJ48_02540  566905 ..  566917 -  -4.7  -3.06796   GCCTACGGTAGCGAA                GCGCC AGG GGGGC                TTCAAGACCGCCATT  47 121
 IUJ48_02535 NONE
 IUJ48_02530  563531 ..  563541 -  -8.2  -3.30771   GGAGATTCCCTACAA                 GGGC TCG GCCC                 CCGCCATGACGGACA  59 386
 IUJ48_02515 NONE
 IUJ48_02510  560202 ..  560216 -    -7  -3.20348   GGGATGAAGATCCAA               CCGAGC CTC GCGCGG               GCCCTTCGCGACGGC  54 46
 IUJ48_02505 NONE
 IUJ48_02500 NONE
 IUJ48_02495  558169 ..  558186 - -12.7  -4.56597   GGGGCCCGCCAAAAA             CGGCTGC GCGG GCAGCCG              TGTTTGGCATACATC 100 197
        urtA NONE
        urtB NONE
        urtC NONE
        urtD NONE
        urtE  545771 ..  545782 -  -2.2  -3.14468   GCGCATTATATCCAA                GCCT TTTC AGAC                 GGAAAGATGGCGCCG  42 20
 IUJ48_02450  545324 ..  545355 -  -3.6  -3.14132   GTCGGCGGCGACGAA      TGCTCGGGCGGAAGC GGC GCGTGCGCC-GATCA      GGCCGCGGGCGGGGC  43 23
 IUJ48_02445 NONE
 IUJ48_02440 NONE
        arsC  540869 ..  540893 -  -7.8  -3.05384   GCGGCGGGCAGGGAA         GC-CGCGGGCA AATT CGCCCGCATGC          CATTTTGCTGGCCGG  55 92
 IUJ48_02430 NONE
 IUJ48_02425  538161 ..  538199 -  -3.1  -2.92495   TGCACAGAAAGAGCA  TGCAGTCCGGCGC-ATCCA GTC CGGACCGTGCCAG-CCGCA  GCAGCGGTCGCGCCA  42 124
 IUJ48_02420  537295 ..  537328 -   -21   -2.6155   TGCTGGAACACGAAG     GCCACTGGCGCGCC ACCCGG GGCGCGCCGGTGGC      GCGGGCCGCCTGAGG 100 101
 IUJ48_02410  534852 ..  534876 - -18.6  -3.53012   TGCGTCGCCCGCAAA          GACCGGCCGC CCTGC GCGGCCGGTC          TTTGCATACGTGGGG  93 345
 IUJ48_02365  525427 ..  525444 -  -9.1  -3.05384   CTGCGCGCCACCGAA             GCGG-CCG GAC CGGACCGC             GGGGTGTCAGAGCAG  60 32
 IUJ48_02360  524233 ..  524257 -  -5.5  -3.05715   AATGCTGCCACGGAA          TGGCAGCAGCC GGA AGCCGCGGCCC          TCAATCATCAAGTGG  49 201
 IUJ48_02355  523440 ..  523450 -  -5.4  -3.89346   CGCTCATCTTAGAAA                 GACA TGC TGTC                 AGATTTTGTCAGCAG  60 74
 IUJ48_02350 NONE
 IUJ48_02340  520425 ..  520441 -  -9.3  -3.15663   AGGCACCGCGATCAA              GCGGCCG GTG CGGCTGC              GCGAGGTGTTGCAGG  56 251
 IUJ48_02330  518462 ..  518473 -  -7.2  -3.01712   TGCTGTTCCGCAAGA                CCGC GGCG GCGG                 TGGTGCTGCAAGCGC  52 101
 IUJ48_02315  515072 ..  515090 -  -3.7  -2.70774   TACGCCAACGACAAG             CGCTGGC GCCAT GCCCACG             GCATCTGGCATCTGT  40 113
 IUJ48_02300  512231 ..  512272 - -15.2  -3.14564   CGAGTCGGCCATCAA CTGCACCCAGGCCGGCACC GCGAG GGTGTCGACCTGGG-ACAG GATCCAGTCGGGCAG  80 83
 IUJ48_02295 NONE
 IUJ48_02290  510383 ..  510400 - -12.7  -3.04144   TCGTCATTTCCAACA             CCACCGG CACG CCGGTGG              TGGCCGCGGCCGCCG  66 435
 IUJ48_02280 NONE
 IUJ48_02275 NONE
 IUJ48_02270 NONE
 IUJ48_02265 NONE
 IUJ48_02260  505008 ..  505025 - -12.7  -4.14598   GGCAATCAAAGCAAA             CGGCCTG GGGG CAGGCCG              CGCCGTCGTCCCCGC  89 246
 IUJ48_02255  504571 ..  504582 -  -3.6  -2.52834   CATTGTATGAGGAAT                CAGC ACGG GCCG                 CAGATCGCGGTGTGT  39 47
 IUJ48_02250 NONE
 IUJ48_02245  502431 ..  502468 - -14.3   -3.5774   ATGGAAGGTGGGAAA   TGCTGCGTAGCAGCA GACTGGAA TGCTGCTAGGCAGCA    ACGTCCATCCTATCG  84 219
        cyoA  501504 ..  501516 -  -4.1  -3.08464   GCATTATTGAGTCAA                TCCTG CGA CAAGA                TTATTCGACGTGGGG  45 1
        cyoB NONE
        cyoC NONE
        cyoD  498504 ..  498523 -   -15  -5.47218   TGCCACCCAAAAAAA            CAGGCGCC TCGC GGCGCCTG             TCTGTCGTCATCGGA 100 50
 IUJ48_02220  497507 ..  497521 -    -7  -2.74012   CGATGACGCCAACGA               CGCGGC CGC GCCGGG               CTATGTGGTGGCCGC  49 244
 IUJ48_02210  495210 ..  495235 -  -3.3  -4.50761   ACCAATGGAAAGAAA         TGGCGATTA TTGGTAGT TAGTCGCCA          TTTATGGCGACGATA  69 77
 IUJ48_02205  494643 ..  494661 - -13.1  -5.40072   GCGGGCGCAAAAAAA             GCCGCCC GGCAA GGGCGGC             CAAGGTACAACAAGG 100 63
 IUJ48_02200  494069 ..  494098 - -13.5  -4.13767   GGCCGGATGGCAAAA       CGCCCGCTTCATC CTGG GATGTCGCGGGCG        TTCTCTTTGGCCGAT  89 57
 IUJ48_02190 NONE
 IUJ48_02185  489755 ..  489775 - -10.4  -3.30124   CCGGAGTCGGGACAA           GGCCGCAGC GTAG GC-GCGGCC            GGCGCTTGCGGTCTT  67 78
 IUJ48_02180  488837 ..  488852 -  -2.4  -3.01712   TCGCGTGGCGGAACA              GCATGG ATTA CCTCGC               AACGGTGGCCGGTTT  41 17
 IUJ48_02175  488003 ..  488015 -  -6.9  -3.53343   AAGCGCCTGTGGAAA                GACGC GCA GCGCC                GCTTCGAAGCCGCCT  55 149
 IUJ48_02165  485560 ..  485584 -    -7  -3.76224   GCCTCAGCTACGAAA          TCGCCGACGC CCTGC GCGCCGGCAC          CTGCGACATCGGCGT  64 502
 IUJ48_02155 NONE
 IUJ48_02150  483824 ..  483875 - -14.3  -3.14132   GGCTTCGTCGACGAA CGGCGCCTGGCCGCCT-GACGCCC GGCCA GGGCGCCTACCCGGCCAGGCCCTG CGCCACCTGGTAGGC  76 8
 IUJ48_02130  480570 ..  480584 - -11.4  -3.34398   CGTGGGCGGGAAATA               GGCGGA TTA TCCGCC               ATTCCCCGTTTTCCT  70 62
 IUJ48_02125  480128 ..  480144 -  -7.9  -3.38272   GACCATCATGTACAA              GGCGCTC TAG GAGGGCC              CGGAGACGGCCGGGC  58 53
 IUJ48_02110 NONE
 IUJ48_02105 NONE
        alkB  475530 ..  475562 -    -7  -3.02461   CAACCGCTGCGAATA     TTGCCTGGCCGCGCAC ACC GCGCTCGGCC-G-CAA     GGCCGGCGCCAGCGC  52 311
 IUJ48_02090  474083 ..  474100 -  -5.5  -3.21099   GCTGCCCATCAGGAA             GCGGC-CC GCC GGCACCGC             GACGAACGGCATGCC  51 226
 IUJ48_02080 NONE
 IUJ48_02075  471897 ..  471915 -  -2.3  -3.24146   TGCGGCAATGAAAAC             CACAGCT TAGGG AGCGGCG             CGCGCGGGGTCTTGT  44 59
 IUJ48_02070  471018 ..  471044 -   -13  -3.05463   ACCTTGCGCAGCGAA         TTCGCCGACATC CCC GACGTCGGCGAG         GCGACCCGCATCGTG  66 480
 IUJ48_02060  469889 ..  469937 -  -8.2  -2.78384   CCGTGGTCGAGGACA CCG-TCACC--GGCG-CCACCGCC GGCGT GGCGGCGGGCGCCACGGTGTTCGG CTACAGCCCCGATGC  52 166
 IUJ48_02050 NONE
 IUJ48_02045 NONE
        acnA NONE
 IUJ48_02035  463846 ..  463891 - -12.6  -2.52635   ACGCGCACCAGCAAC CCGGCCACGCGCGGCAACCGGCC GGT GGGCG-T-GCCGCGC-TGGACGG CCAACCTGGGCGCGG  62 338
 IUJ48_02010  458296 ..  458329 - -12.5  -3.78934   CCTGTTCGACAAGAA     GTACTACCTGGGCGGC GTG GCCAACCAGGT-GTAC     TACGGCGAGCCGCGC  78 111
 IUJ48_01985  451337 ..  451354 -  -6.9  -4.02108   GCCAGCAGAAGGAAA             CGGCGAT GATC AACGCCG              AGATCCAGGTGGTCA  66 254
 IUJ48_01975  449710 ..  449761 -  -7.8  -3.01712   TGGCGCTTGGCAAGA TCGGCGCGG-CGCGCACGCGCGCCA TCC TGGCGGACATGCGCGGCCTGGTAGA TCGTTTCGAGGCCGC  52 199
 IUJ48_01965 NONE
 IUJ48_01960  447239 ..  447275 -  -9.2  -2.79098   GCGACGCATGAAGGA    CCAGCGCGCCGCCGCG TTCTG CTCGGCGGCGTCCTCG    CTGGCGGCGTTCGTC  52 426
 IUJ48_01950  445125 ..  445176 - -12.8  -3.07233   GGACAACCTGGAAGA GCCGGCCCACAAGCTGGC-GCGCCA GGT CGCCGCCGACGGCCCCTGGGCCGGC AAGATCGGCGGCGTC  66 386
 IUJ48_01940  443754 ..  443772 - -17.4  -2.50016   CGGCACGAGCAAGAG             GGCCCGCC CAT GGCGGGCC             TTTTTTTTCGCCGCG  83 110
 IUJ48_01930  441695 ..  441705 -  -2.4  -2.95491   AAACGCCACGATAGA                 GCGG AAA CAGC                 TTCTGAAAAACCAGC  41 57
 IUJ48_01925  441215 ..  441241 -  -9.3  -2.71011   ACGCTCCTGTAAGGA         GGCAGCGCGCC GGGAT GCCGCGTTGCC         CGCCTTATTACACCA  56 33
 IUJ48_01920  440215 ..  440228 -  -9.5  -4.46404   CAAGGAAGAGGAAAA               GCGCC TGGT GGCGC                GGCTCGAGAACATCA  84 391
 IUJ48_01910  438510 ..  438527 -  -4.7  -3.72576   CGGTGGCCTATGAAA             CGCCGCG CTAT CGCATCG              CGTTGAACGTCAACA  58 101
 IUJ48_01890  433824 ..  433834 -  -2.4  -3.03781   GGAAGGGAAACTATA                 GCGG CCG CAGC                 GCGTACCAGGCGATG  41 10
 IUJ48_01885  432687 ..  432709 -  -9.8  -2.70932   CCTGGCGTTCAAGGA           CCGCAGCG ACGCGCG CGCCGCGG           TCGAGGCCGTGTGGC  56 60
 IUJ48_01875 NONE
 IUJ48_01870  429259 ..  429294 - -27.6  -5.47218   CGCGACTGAAAAAAA    CGCCGCGGGTCGGGGT TCGG ACCCCGGCCCGCGGCG     CGGCATGCGCGCGTC 100 39
        cyoA NONE
        cyoB NONE
        cyoC NONE
        cyoD NONE
 IUJ48_01840  422312 ..  422322 -  -3.2  -3.06796   GGGCAGGGGAGCGAA                 CTCC CCG GGAA                 TGCCTGTCTTGATTG  43 453
 IUJ48_01835  421003 ..  421029 -  -5.6    -4.254   GGAAGAGGGAAGAAA         GGGAGTCGCGCC GTG GGCACGGGACCC         CGCGATGCGTCGACT  70 81
 IUJ48_01830  419563 ..  419609 -  -7.3  -5.10968   AGGAAGAGACAAAAA GAAAGGGAACAGCACGCTGAGCA TGA CGCCCAGCG-G-TGTTCCCGGCC GCTATTGTAGGTCAA 100 208
 IUJ48_01825  418164 ..  418194 -    -6  -3.18264   CTGTCGATCGACGAA       TGGGGCCGGCGG GTGGGGG CCAGCGGCCGCA       CGCTGGCGCGGGTGT  50 246
 IUJ48_01815  416116 ..  416136 -  -2.5  -3.14211   ATTCCCGCGGACGAA            CTGCTCAAG CGG CTCGAAGAG            CTGCCGGCCGACCAT  43 262
 IUJ48_01805  413915 ..  413937 -  -5.4  -3.15544   GGCCATGGCGATGAA           GGCCAACGCG ATC CGCGCCAGGC           GGAGCGGGCGCTGGC  47 262
 IUJ48_01795  411958 ..  411978 -  -4.6  -3.45945   TCTACGGATAAGCAA            CCGGATCG GCCCT CAGTCCGG            CGCTTCGGCCGGCCG  53 478
 IUJ48_01785 NONE
 IUJ48_01775  409505 ..  409518 -  -4.5  -3.05963   ACCCTTATTGGAACA               TGCCG CTTT CGACA                CAGAAGGCGACCAGT  45 1
 IUJ48_01770  408300 ..  408336 -  -7.1  -3.26947   CAAGGGCGACACCAA    CCGCATCGCCGACAGCG GCT CGCTGCCCGAGATCAGG    GTCTGTTACGACATC  55 456
 IUJ48_01750  403663 ..  403679 -  -6.5  -3.05384   GGCCTTTGCACCGAA              CGCATCG ACG CCATGCG              CGCGGTCGAGAGCCT  48 507
 IUJ48_01730  395022 ..  395051 - -10.5  -3.53012   GGCGGGGGCGGCAAA       GGCGGGGGAGCCG GGGG CGGCGGCGCCGCC        GCGGGGATGGGCATG  65 185
 IUJ48_01700 NONE
 IUJ48_01695 NONE
 IUJ48_01690  388659 ..  388677 -  -7.3  -3.05844   TCGTCTATCGGAAGA             GGGCGCG GCCGG CGCGCCG             CGCAAGGCTGGGGCG  55 45
 IUJ48_01685  388069 ..  388087 -  -8.1  -3.17212   GTACTACCCCAGCAA            GCGCGACC TGTC GG-CGCGC             ACGCGGGCGTTCATC  53 121
 IUJ48_01675  385693 ..  385740 -   -11  -3.14344   CAGTGGCGCCAGCAA CTGCGGCTGATCCACGCGCTGG AACG CCTGAGCGCGGGCCAGCCGGTG GCGCAGGTGGCCGAC  64 199
 IUJ48_01665  383546 ..  383573 -  -5.6   -3.4252   GGCCACCCAGCAGAA       CGCCGC-G-CTG GTGGAA CAGTCGGCGGCG        GCGTCCGCCATGTTG  52 186
 IUJ48_01655  380460 ..  380480 -  -4.8  -2.75826   CATGGCAATACATTA           GCA-AACAC TTAT GTGTTGTGC            AAGCCCCCGATGAAC  44 61
 IUJ48_01650 NONE
 IUJ48_01645 NONE
 IUJ48_01640  379098 ..  379121 -  -3.6  -2.71731   CCGATGGCGCAAGCA          GCCCGGGCGC GGCG GCGTCCTTGC           GCGTCGGCGCATCAG  40 37
 IUJ48_01625  375361 ..  375372 -  -5.8  -3.09834   TATCCCATGAGGGAA                CCCT GATC AGGG                 GCTCGCCGTCGGAGG  49 59
 IUJ48_01615  373028 ..  373046 -  -3.7  -4.58395   GCCATCGGTGAAAAA             CTCGGCG GCCTT CGCCAGG             TTCATCGATGCCGAG  72 84
 IUJ48_01600  368415 ..  368427 -  -4.8  -2.88069   TTCACACGATAAGGA                GCCT CGCAC AGGC                CGGCAATCGGGCGCC  45 79
 IUJ48_01580  364572 ..  364607 - -11.2  -3.01712   CGCTGTTGGTGAATA   CCAGC-CGCGCCGGCC TGATCG AGCCGG-GCGCGCTGG    TGCAGGCGCTGCGCG  62 300
 IUJ48_01570 NONE
 IUJ48_01565  361604 ..  361622 -  -9.5  -3.14527   CAATCCCGAGGAACA             GCCGCGC CTGGT GCGCGAC             CTGGGCGCCAGCCAG  60 374
 IUJ48_01555  359993 ..  360006 -  -3.1  -3.28712   GCGGTCGGGGGACAA               CG-GCA TGA TGCGCG               GGGACCGGTTCATCC  45 35
 IUJ48_01550  358905 ..  358915 -  -8.2  -3.32536   AAATGACGTCTACAA                 CGCC GCC GGCG                 AAAGCCTGGGCGACA  59 386
 IUJ48_01525  354927 ..  354952 -  -3.1  -3.72592   AAGCGCCAGCAACAA         GGCGCCCAGTCG GCC CGGCCGGG-GAC         GGGGCAGGGTTGCGT  54 40
 IUJ48_01520  353635 ..  353648 -  -5.2  -3.55563   ACGCCACGCCGCAAA               GCGC CCGGCT GCGC                CACGACATCGAGCGG  54 242
 IUJ48_01505 NONE
 IUJ48_01500 NONE
 IUJ48_01495  347241 ..  347251 -  -2.4  -3.06671   ACATGCATCCGAAGA                 CGTC GGT GCCG                 GGAGTGCCGCGCAGT  41 274
 IUJ48_01450  333246 ..  333262 -  -7.9  -3.61089   GCTCAAGAAGTACAA              CGGCATG CCG CAGGCCG              GCAAGCTGGCCGAGG  60 74
 IUJ48_01420  326850 ..  326869 -   -10  -3.09516   GCGTTCACCACCGAA            GCGGGCCTG TAT CAGGCC-GC            GGGCATCCCGACGGT  59 166
 IUJ48_01395  320394 ..  320428 -  -4.8  -4.18018   CTTCGTCACCGAAAA     GCCCGATCCGGAAATG GAG CGCGCCCTGATCGAGC     GCCGCATCGAGATCG  66 503
 IUJ48_01385  319215 ..  319226 -  -7.2  -3.59979   CGCGGGCATCTCAAA                GCGC GATC GCGC                 TTCGAGATGGATGGG  60 41
 IUJ48_01360 NONE
 IUJ48_01355 NONE
 IUJ48_01350 NONE
 IUJ48_01345  311854 ..  311910 - -18.7  -3.38812   GCCTGTTGAACAACA CGGCAGCGTCCGCGCTGACGCTGGGCGG CGTG CCGCCC-GC--CGGCGCGGGCGCTGACG TGCGCGCCTACGGCG  89 53
 IUJ48_01305  302676 ..  302709 - -10.1  -2.56914   CATCTTAGCAAGTCA     TGGCGGCGCTTGCGCG GGA CGCGCG-GCGCCGCTG     CGCAGATGCGCGCCG  58 57
 IUJ48_01300 NONE
 IUJ48_01295  299445 ..  299489 -    -2  -3.09286   ACATCATGGCAAAAC CCTTGGCATCAGCCTGGCG CGGGATTC CGCCAGGCAG-CGCAATGA AGGCATTCGACAGTT  42 96
 IUJ48_01290  298708 ..  298762 -  -9.1  -2.94299   CAACAGGGCAAACCA GTCGGC-GGCCTGTTGCAGGCTGTCG AAAT CGGCCGCCTGCAAGCGGCCTGGCGAG GGCGCGGCCCCATTG  59 77
 IUJ48_01285  297753 ..  297768 -  -2.5  -3.42315   ATGAGATTCAAAAAC              CCGAA CTGGTT CTCGG               AAAAATTTCTTGTCA  45 38
 IUJ48_01280  295179 ..  295195 -  -4.3  -3.33744   TGCCTTCTCAAAAAT              CGTAGCG CAG CGTCACG              CCGGCGAATCGTGGC  49 1
       groES NONE
        groL  291083 ..  291117 -   -15  -4.61231   CCAGATCCGCAAAAA     GAAAAACCCCCGGGGC GAA GGTCCGGGGGTCTTTC     GGGGTACTGCGTGCC 100 80
 IUJ48_01250  289648 ..  289664 -  -4.3   -3.4072   CACGGTCTACCAGAA              CCCGGGC GCG ACCCAGA              ACCGCATCGCCGAAC  49 382
 IUJ48_01240 NONE
 IUJ48_01235  287281 ..  287334 - -10.2   -4.4078   TGTTCCGAAGGAAAA GCCGCAAGGCG-GTCGGGCGCCATCGC CGC GCG-CGCCGCTCAGCGCGCC-TGCGGC TTGTACGCCACCGCC  88 10
 IUJ48_01230 NONE
 IUJ48_01225 NONE
 IUJ48_01220 NONE
 IUJ48_01215 NONE
 IUJ48_01210 NONE
 IUJ48_01205 NONE
 IUJ48_01200 NONE
 IUJ48_01195  279756 ..  279799 -   -13  -2.88544   CGCCAGCGGCAGAGA TGGCCGCGGGCGCTGGCGCCG AGG CCGCGCCA-CGCTCGCGGGAA GCGGCCGGCGTCGGC  69 77
 IUJ48_01185  277489 ..  277505 -  -3.5  -2.94099   GGCTCCCAGTATAGA              GGCGCGG ACC CCGGGGC              GGGCAAGCCGGCGCC  42 46
 IUJ48_01180 NONE
        pyrF  275263 ..  275286 -   -11  -3.14211   ACCGGCGTTGAGGAA          GACCGCGC GCGCAATG GCGCGGTC           CAGGGATACCGCGGG  66 67
 IUJ48_01140 NONE
 IUJ48_01135  268720 ..  268732 -  -2.6  -3.77906   AATTCAAACATACAA                GCGC GGGAG GCAC                ACTCGGGAAAGTCCC  53 170
        phnD NONE
        phnC NONE
        phnE NONE
        phnE  265115 ..  265132 - -14.1  -5.75342   CGCGGGCAAAAAAAA             CCGCCCG TTGC CGGGCGG              CGCAAAGGAACGTTC 100 62
 IUJ48_01105  258711 ..  258754 - -27.5  -4.07568   GCCCGGCGCTGAAAA CACCGCGCCCCACGTCTGC TGCATC GCAGGCGTGGGGCGCGGCG TTTGTGGCGGGCGCA 100 69
        rsmD NONE
        coaD  256125 ..  256156 -  -6.5   -4.2349   TGCGGACAGCCAAAA      TGCAGGGAGGGCGC GCAAG GCGCCCTC-CGGGA      GGGTTCGGTGAGGCG  72 54
 IUJ48_01085 NONE
        benE  254064 ..  254077 -  -3.7  -3.28712   CGCGGCGGTGGACAA               GGCGC TCAA GGGCC                TGCTGGGCAAATGAG  47 487
 IUJ48_01065  249661 ..  249678 -  -2.5  -2.74605   TTTGGGCAAAAGCTA             CTCTCCG ACGG CGGCGGG              CTCCGTTTTGGCGGG  38 5
 IUJ48_01060  248928 ..  248955 -  -8.7  -4.19735   TCCGGGAAAATGAAA        TAACATTCAAT AGATTA ATTGAATGTTA         TTCAATAACCTTTTC  72 278
 IUJ48_01055  248227 ..  248247 -  -5.3  -3.16881   CAGGGATGCCAGGAA            CTCCCCC TGCGAAC GGGGGCG            GGTGGAGACTGGCCG  47 191
 IUJ48_01050  246458 ..  246468 -  -2.4  -2.59564   GTTGGATCGCATAAC                 GCGC ACA GGGC                 CGGCAAAAGAAGACT  38 143
 IUJ48_01045  243853 ..  243865 -  -4.8  -3.01791   ATCCTTGCCTGAAGA                GCTG CAAAC CAGC                CTGCCTAGCATCGAA  46 209
 IUJ48_01035  240610 ..  240630 -  -6.7  -3.81089   CACACAGACGAAGAA            GGCTCTGCC CTG GGGAGGGCC            GGTATGCGGTCGGAG  62 276
 IUJ48_01030  239289 ..  239306 -  -4.8  -3.55801   AGCAATTTTCTTAAA             GGTGCC TTCTTC GACACC              TGCCGACAGGTCGGT  53 132
        mutM  216465 ..  216495 - -18.3  -2.71712   CGTGGCTGCCCAAAT       GCATCCGGGCCGC GCAGG GCGGCCCGGATGG       GAACCTTTCGGACCA  87 83
 IUJ48_00935  215345 ..  215364 - -16.4  -3.02511   TCGATCTGTGGAACA            GCGGCCGG CGCG CCGGCCGC             GCGGGATCAGCCCTC  85 32
 IUJ48_00930 NONE
 IUJ48_00925  213185 ..  213205 -    -9  -4.56775   ACCGTGCCCGAAAAA           CT-GGCGGC CAGC GCCGCCCAG            CCATTCGGTCTGCGC  83 144
 IUJ48_00915  210917 ..  210953 - -18.8  -3.99805   CCGGAAAAATCCAAA   GCCAAACGGCGATGCGC TTGC GCGCATCGCCGTG-GGC    GGGCGTGACGGCGGA 100 49
        fahA  209484 ..  209521 - -18.5  -2.84687   CCAAGGATGACGAGA   TCGAGGCGTTGACGACCG ATG CGGCCGCC-ACGCCCCGA   TCCTGACGGACGTCG  89 42
 IUJ48_00890 NONE
 IUJ48_00885 NONE
 IUJ48_00880 NONE
 IUJ48_00875 NONE
 IUJ48_00870  200414 ..  200427 -  -5.9  -2.86343   AGCTCAAGCACTACA               CCACG CTGC CGCGG                CCCTACGACCTGGAC  47 376
 IUJ48_00840 NONE
         pgi NONE
 IUJ48_00830  190337 ..  190387 -  -5.5  -3.06312   AAATCGCTGATCGAA GCGGCTGCCTGCGGC-CG--GGCCGT GGTC ACGACCGACGTGCCG--GGCTGCCGC GATGCCATTGACCCG  46 237
 IUJ48_00775  177114 ..  177127 -  -2.4  -3.49475   TTCATGGGTACAGAA               TCAG AAAAGG CTGA                AATGGCGGCGTGTCG  47 52
 IUJ48_00770  176031 ..  176041 -  -2.4   -4.2349   GGGTTATACCGAAAA                 CGGG CTT CCAG                 AAGCTCACCAATCTT  63 116
 IUJ48_00765  173575 ..  173590 -  -6.8  -2.75891   ACAGGTACGCAAGGA              GGCGGCC GGC GGC-GCC              GGCGGGAAGATTCCA  48 105
 IUJ48_00760  172682 ..  172716 - -11.3  -2.71731   GTCATCCGCGAAGGA     CGCTACCGGGCGCAC ATCGA GCGCACCCGCGAGCG     GCTGGCGCAGGCGCA  59 379
 IUJ48_00750  170018 ..  170050 - -16.1  -4.07568   GGGGTTCTTTGAAAA      CGCCGGAGGGCGGCC CGG GGCCGCCCGCCGTTG      TGTGCGATGCGCGGC  95 61
 IUJ48_00745  168447 ..  168470 -   -16  -4.07568   TGTCTTTCGGCAAAA          CCCCG-GCCGC CTG GCGGCTCGGGG          CGGTGAACGCGTCTA  95 46
 IUJ48_00740 NONE
 IUJ48_00735  165249 ..  165261 -  -3.4  -2.70932   TTTCCCCCTGAACTA                CTTG CCCGT CAAG                GGGCTTTTTTCACAT  40 21
 IUJ48_00730 NONE
 IUJ48_00725 NONE
 IUJ48_00720 NONE
 IUJ48_00715 NONE
 IUJ48_00710  158657 ..  158678 - -18.7  -4.20806   GATTTCAAAATGAAA           GCCGGCGCC CTCG GGCGCCGGC            CATATTGTCGACAAC 100 48
 IUJ48_00705  156420 ..  156452 - -15.6  -4.97158   TTAGATTAAATAAAA      GGCCTGAGTCCGGT GTTGA ACCGAGCTCAGGCC      TTTTGACTGCGGACT 100 94
 IUJ48_00695  154962 ..  154972 -    -4  -3.33744   TGCTCTTCCAAAAAG                 TTTG AGG CAAA                 TGATTGCTGTTTGAT  49 55
 IUJ48_00690 NONE
 IUJ48_00685  154010 ..  154023 -  -3.7  -3.05022   CGGTGGAGATACAGA               TGCCC GTTC GGGCC                GACCAGTAGAATTTC  45 182
 IUJ48_00680  153229 ..  153239 -  -8.2  -3.28712   GGCGCGCGTGGACAA                 CGCC TAT GGCG                 ACCGCAACCTGGTGT  59 207
 IUJ48_00635  141521 ..  141566 -  -7.6  -3.28712   GCGCTTGCGCGACAA GCCGGCGC-GTCCCAAGGCCGAC CAG ATCGGC-TTGCGCCGGCGC-GGC GCGCGTGGCGGCCGC  55 181
 IUJ48_00625  139498 ..  139508 -  -8.2  -3.04144   CTTTTAGCCTGAACA                 GGCC CTA GGCC                 TGGCGCCCCGGCGCC  56 19
 IUJ48_00600  131606 ..  131645 -   -20  -2.90496   GGCCCCCTGAAACGA  CGCAACCCGCCGGTCGCGC GGG GCGCGTCTGGCGGGTTG-G  ATAGCGCTAGGCCGG 100 97
        metG  129396 ..  129412 - -13.7  -5.40072   GCCGCCTGAAAAAAA              GCCCGCA GAT TGCGGGC              TTTTTTTCATGGCTC 100 52
 IUJ48_00575  125388 ..  125410 - -11.3  -2.51133   GATGCACTCATCAAG           CTGACCCGC GCGCT GCGGGTCAA           TCCCATGTGGCTCAG  58 208
 IUJ48_00565  123607 ..  123618 -  -5.8  -3.36878   GTGATCTAGGTAGAA                GGCA TCAG TGCC                 GGCTGATGACTCCAG  53 128
         kch  121968 ..  121981 -  -8.1  -3.66732   CAATGACCTGAAGAA               TCGCG CCGC CGCGA                TGGGCGGCAACGTGG  60 135
 IUJ48_00530 NONE
 IUJ48_00525 NONE
 IUJ48_00520 NONE
        rbbA NONE
 IUJ48_00510 NONE
 IUJ48_00505 NONE
        phbB  108470 ..  108506 - -25.2  -3.14132   TTCCTGGTCGAGGAA   CTGGCGCCGCCGGCGGC CTGA ACCGCCGGCGGCGCC-G    CAGCGCGCGAACCGC 100 42
 IUJ48_00490  106503 ..  106528 - -14.7    -5.626   TACGTTACAAAAAAA         GCAGCGCAGCG GGAA CGCTGTGCTGC          CTGGTATCGCCCTCC 100 80
 IUJ48_00485 NONE
        cydB NONE
 IUJ48_00475  103673 ..  103695 -    -4  -3.22475   GGGATCCGGAGAAGA           CGGCGTTTCA GGT CGACATGCCG           AGGGCGCGCATCACC  47 10
 IUJ48_00470  102147 ..  102166 -  -5.6  -3.65199   AAGCCGTCATGGAAA            CCG-GCCGC GAC GCGGCACCG            TTCTGGAATTTGAAG  57 104
 IUJ48_00465 NONE
 IUJ48_00460  100802 ..  100825 - -12.4  -2.97245   TCATCGACAAGGAGA          TCGCGGCCTG GGCG CAGGCCGTGA           AGGACTCCGGCGCCA  66 91
 IUJ48_00390 NONE
 IUJ48_00385 NONE
 IUJ48_00375   80817 ..   80847 - -20.4  -2.70932   CCGGCTGGCCAATGA       GCCGCGGGCCGCGT TGG ACGCGGCCCGGAGC       GCCTAGCGCGGGCAT  93 103
 IUJ48_00360 NONE
        acnD   76778 ..   76799 - -12.9  -3.53012   GTCTTGGGTGGGAAA           GGCGGGTGC CGCG GCGCCCGCC            ATGCGGTGGGGTGTC  78 39
        prpF   75514 ..   75555 - -22.2  -2.72511   GGCATCGGCTGAAAT GGCGCGCCACCGCCGGGG GGCTTG CCCGGGCGGCGGCGCGGC  CCCGGCCTCAGAACC 100 33
 IUJ48_00345 NONE
 IUJ48_00340   73814 ..   73831 -  -2.5  -3.55761   CAGCCAGGGCGGAAA             GCAGGGC GAGC GCCAGGC              CGGCCAGGCGTGGAC  47 163
 IUJ48_00335   71286 ..   71316 - -23.4   -2.8294   CAGCCTGGACAAGGA       CTTCGACGCGCTGG TGG CCAGCGCGCCGAAG       GACAAGGGCCGGTAA 100 127
 IUJ48_00315 NONE
 IUJ48_00310 NONE
 IUJ48_00305 NONE
 IUJ48_00300   63620 ..   63630 -  -8.2  -2.87211   AGGCGCGCCGAGACA                 CGCG GCG CGCG                 ATATCGAAAGGGGAT  55 40
 IUJ48_00295 NONE
        maiA   61858 ..   61900 -  -8.1  -3.16564   GCCGGAGCGGATGAA GACCCGCTCCGGCCGTCGC GTCAG GCGGCGGCTTGCGCCGGCC GTGGCGCATCGGGCT  55 3
 IUJ48_00285 NONE
 IUJ48_00280   58625 ..   58638 -  -4.5  -3.14132   CGGCGGCGTCAGCAA               CGACGC CAT GCG-CG               CGCAGTTGGTGGAAA  47 196
 IUJ48_00260   54505 ..   54523 -    -3  -3.54307   AAGATTTGGTGGAAA             TGGGCG AGCGATA CGCCCG             TGACACGGGCTACCC  50 412
 IUJ48_00245   50809 ..   50826 -  -2.7  -3.53811   GCCAGCGGCGTCAAA             CACGCGAA CTT TTCG-GCG             GTGATGGCCTTGACT  50 459
 IUJ48_00235 NONE
 IUJ48_00230   47392 ..   47412 -  -6.1  -3.05463   ATGCCGCCGATCGAA            GCGCAAC TGCCGAT GCTGCGC            GCGCTATGGCCGGGG  48 315
 IUJ48_00215   44347 ..   44359 -    -2  -2.64155   GTCTGCTGAAATTTA                TTCA TAAAG TGAA                ATTTTGTTCCCTTCA  38 51
 IUJ48_00210   42835 ..   42850 -  -2.6  -4.24342   CGCGGCATCAAGAAA              TCGATCA CGA TG-TCGA              TCGCCTCCCCGTCAT  63 360
        trmB   36840 ..   36856 -  -2.2  -2.62184   TCGCGGGGTAGAGCA              TCAGGC CACTC GCTTGA              AGATCAGGTCCCAGA  38 9
         pip NONE
        thiS   35621 ..   35644 -  -9.6  -5.52384   GCTGCAGCAAAAAAA          GGGCTGCA TTTTTTGC TGCAGCCC           TTTTTGCGATATTCG 100 69
 IUJ48_00160 NONE
        lysM   34510 ..   34532 - -15.6  -5.40072   TCTCCGCCAAAAAAA           TGGCCAGGCA TTG CGCCTGGCCA           AATCATCGCGGCAGG 100 91
        ccsA NONE
 IUJ48_00140   31603 ..   31623 -  -9.7  -3.74693   GGGCATGGGAGGAAA            GCAGGTTGG TAT CCAACATGC            ATTATGCCGTGCGTG  71 206
        ampD   31000 ..   31019 -  -3.4  -3.67052   AGATCTTCAACATAA            CCGGTCCT TGTA AGGTCAGG             CGGGCGGCAATTGCC  51 21
 IUJ48_00130   30000 ..   30016 -  -2.1   -5.0916   CGTTCAACACAAAAA              GCTTGTC AAA GACCTGC              CGGTCTCCACGCTCC  81 386
 IUJ48_00090   21346 ..   21368 -    -2  -3.01712   GCGTTCGGTGCAAGA          CCGCTCTGGC GTTTG GCCAG-G-GG          CGCTGTTCGTGGCGG  41 98
 IUJ48_00035 NONE
 IUJ48_00030 NONE
        dgoD NONE
 IUJ48_00020    3663 ..    3718 - -15.5  -5.03145   GAACTCCGGAAAAAA CGACA-ACCCAAAGCAGAAGGGCGCCC ACGT GGGCGCCCTTC-GCATTGGCTACGGCG GTGCGTGCGGATCAG   0 37
