C4901_00010 PF00308 Bacterial dnaA protein C4901_00010 PF08299 Bacterial dnaA protein helix-turn-helix C4901_00010 PF11638 DnaA N-terminal domain C4901_00015 PF00712 DNA polymerase III beta subunit, N-terminal domain C4901_00015 PF02767 DNA polymerase III beta subunit, central domain C4901_00015 PF02768 DNA polymerase III beta subunit, C-terminal domain C4901_00020 PF02463 RecF/RecN/SMC N terminal domain C4901_00025 PF00204 DNA gyrase B C4901_00025 PF00986 DNA gyrase B subunit, carboxyl terminus C4901_00025 PF01751 Toprim domain C4901_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_00035 PF02390 Putative methyltransferase C4901_00040 PF05690 Thiazole biosynthesis protein ThiG C4901_00045 PF02597 ThiS family C4901_00065 PF14236 C4901_00065 C4901_00075 PF13560 Helix-turn-helix domain C4901_00085 PF07282 C4901_00085 C4901_00105 PF05170 C4901_00105 C4901_00110 PF00633 Helix-hairpin-helix motif C4901_00110 PF00730 HhH-GPD superfamily base excision DNA repair protein C4901_00110 PF14815 NUDIX domain C4901_00115 PF04362 Bacterial Fe(2+) trafficking C4901_00120 PF01738 Dienelactone hydrolase family C4901_00125 PF04055 Radical SAM superfamily C4901_00145 PF01610 C4901_00145 C4901_00145 PF13542 C4901_00145 C4901_00155 PF01609 Transposase DDE domain C4901_00165 PF02470 C4901_00165 C4901_00170 PF04403 C4901_00170 C4901_00175 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4901_00175 PF06481 COX Aromatic Rich Motif C4901_00180 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4901_00185 PF00510 Cytochrome c oxidase subunit III C4901_00195 PF03009 Glycerophosphoryl diester phosphodiesterase family C4901_00200 PF01266 FAD dependent oxidoreductase C4901_00205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4901_00205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4901_00210 PF01230 HIT domain C4901_00215 PF13419 Haloacid dehalogenase-like hydrolase C4901_00230 PF00873 AcrB/AcrD/AcrF family C4901_00235 PF10604 Polyketide cyclase / dehydrase and lipid transport C4901_00240 PF03692 C4901_00240 C4901_00245 PF01964 ThiC family C4901_00245 PF13667 ThiC-associated domain C4901_00250 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) C4901_00255 PF00581 Rhodanese-like domain C4901_00260 PF00857 Isochorismatase family C4901_00265 PF00534 Glycosyl transferases group 1 C4901_00265 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C4901_00270 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_00275 PF00535 Glycosyl transferase family 2 C4901_00290 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_00295 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_00300 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_00320 PF00733 Asparagine synthase C4901_00320 PF13537 Glutamine amidotransferase domain C4901_00325 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_00330 PF00534 Glycosyl transferases group 1 C4901_00330 PF13439 Glycosyltransferase Family 4 C4901_00335 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_00340 PF04138 C4901_00340 C4901_00345 PF00535 Glycosyl transferase family 2 C4901_00355 PF01609 Transposase DDE domain C4901_00375 PF14236 C4901_00375 C4901_00380 PF13808 C4901_00380 C4901_00385 PF06150 ChaB C4901_00390 PF13671 AAA domain C4901_00395 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_00400 PF10276 Zinc-finger domain C4901_00405 PF01063 Aminotransferase class IV C4901_00410 PF01596 O-methyltransferase C4901_00415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4901_00415 PF07497 Rho termination factor, RNA-binding domain C4901_00415 PF07498 Rho termination factor, N-terminal domain C4901_00420 PF00085 Thioredoxin C4901_00425 PF00270 DEAD/DEAH box helicase C4901_00425 PF00271 Helicase conserved C-terminal domain C4901_00430 PF03079 ARD/ARD' family C4901_00435 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain C4901_00440 PF00596 Class II Aldolase and Adducin N-terminal domain C4901_00445 PF00486 Transcriptional regulatory protein, C terminal C4901_00450 PF00593 TonB dependent receptor C4901_00455 PF05168 HEPN domain C4901_00460 PF01909 Nucleotidyltransferase domain C4901_00470 PF11459 C4901_00470 C4901_00470 PF17194 C4901_00470 C4901_00475 PF08843 Nucleotidyl transferase of unknown function (DUF1814) C4901_00490 PF13098 Thioredoxin-like domain C4901_00495 PF01218 Coproporphyrinogen III oxidase C4901_00500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C4901_00500 PF02843 Phosphoribosylglycinamide synthetase, C domain C4901_00500 PF02844 Phosphoribosylglycinamide synthetase, N domain C4901_00505 PF01808 AICARFT/IMPCHase bienzyme C4901_00505 PF02142 MGS-like domain C4901_00510 PF02954 Bacterial regulatory protein, Fis family C4901_00515 PF01207 Dihydrouridine synthase (Dus) C4901_00520 PF11906 C4901_00520 C4901_00520 PF13719 C4901_00520 C4901_00525 PF06325 Ribosomal protein L11 methyltransferase (PrmA) C4901_00530 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain C4901_00530 PF02785 Biotin carboxylase C-terminal domain C4901_00530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4901_00535 PF00364 Biotin-requiring enzyme C4901_00540 PF01220 Dehydroquinase class II C4901_00545 PF08534 Redoxin C4901_00550 PF02683 C4901_00550 C4901_00550 PF11412 Disulphide bond corrector protein DsbC C4901_00550 PF13899 Thioredoxin-like C4901_00555 PF03091 CutA1 divalent ion tolerance protein C4901_00560 PF12146 Putative lysophospholipase C4901_00565 PF04186 C4901_00565 C4901_00570 PF00166 Chaperonin 10 Kd subunit C4901_00575 PF00118 TCP-1/cpn60 chaperonin family C4901_00585 PF00501 AMP-binding enzyme C4901_00585 PF13193 AMP-binding enzyme C-terminal domain C4901_00590 PF07977 FabA-like domain C4901_00600 PF13561 Enoyl-(Acyl carrier protein) reductase C4901_00605 PF00535 Glycosyl transferase family 2 C4901_00610 PF04820 Tryptophan halogenase C4901_00615 PF14236 C4901_00615 C4901_00620 PF13808 C4901_00620 C4901_00620 PF14236 C4901_00620 C4901_00650 PF03006 C4901_00650 C4901_00655 PF01863 Protein of unknown function DUF45 C4901_00660 PF00301 Rubredoxin C4901_00665 PF00762 Ferrochelatase C4901_00670 PF08543 Phosphomethylpyrimidine kinase C4901_00675 PF02581 Thiamine monophosphate synthase/TENI C4901_00680 PF00202 Aminotransferase class-III C4901_00690 PF00990 GGDEF domain C4901_00690 PF13426 PAS domain C4901_00695 PF01965 DJ-1/PfpI family C4901_00695 PF12833 Helix-turn-helix domain C4901_00700 PF00892 EamA-like transporter family C4901_00705 PF00857 Isochorismatase family C4901_00710 PF04379 Protein of unknown function (DUF525) C4901_00715 PF00149 Calcineurin-like phosphoesterase C4901_00720 PF00561 alpha/beta hydrolase fold C4901_00725 PF00009 Elongation factor Tu GTP binding domain C4901_00725 PF03144 Elongation factor Tu domain 2 C4901_00725 PF16658 C4901_00725 C4901_00730 PF00009 Elongation factor Tu GTP binding domain C4901_00730 PF00679 Elongation factor G C-terminus C4901_00730 PF03144 Elongation factor Tu domain 2 C4901_00740 PF00440 Bacterial regulatory proteins, tetR family C4901_00740 PF16925 C4901_00740 C4901_00750 PF13808 C4901_00750 C4901_00750 PF14236 C4901_00750 C4901_00760 PF07798 C4901_00760 C4901_00765 PF02219 Methylenetetrahydrofolate reductase C4901_00770 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C4901_00770 PF05221 S-adenosyl-L-homocysteine hydrolase C4901_00775 PF00438 S-adenosylmethionine synthetase, N-terminal domain C4901_00775 PF02772 S-adenosylmethionine synthetase, central domain C4901_00775 PF02773 S-adenosylmethionine synthetase, C-terminal domain C4901_00780 PF01171 PP-loop family C4901_00785 PF03279 C4901_00785 C4901_00790 PF03279 C4901_00790 C4901_00795 PF03279 C4901_00795 C4901_00800 PF13432 Tetratricopeptide repeat C4901_00805 PF01029 NusB family C4901_00805 PF01189 NOL1/NOP2/sun family C4901_00810 PF00551 Formyl transferase C4901_00810 PF02911 Formyl transferase, C-terminal domain C4901_00815 PF01327 Polypeptide deformylase C4901_00820 PF01476 LysM domain C4901_00825 PF04361 C4901_00825 C4901_00830 PF01131 DNA topoisomerase C4901_00830 PF01396 C4901_00830 C4901_00830 PF01751 Toprim domain C4901_00835 PF02683 C4901_00835 C4901_00835 PF11412 Disulphide bond corrector protein DsbC C4901_00835 PF13899 Thioredoxin-like C4901_00840 PF13098 Thioredoxin-like domain C4901_00845 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C4901_00845 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C4901_00850 PF02556 Preprotein translocase subunit SecB C4901_00855 PF00462 Glutaredoxin C4901_00860 PF00581 Rhodanese-like domain C4901_00865 PF01022 Bacterial regulatory protein, arsR family C4901_00870 PF01676 Metalloenzyme superfamily C4901_00870 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C4901_00875 PF01551 Peptidase family M23 C4901_00880 PF03572 Peptidase family S41 C4901_00880 PF13180 PDZ domain C4901_00885 PF00583 Acetyltransferase (GNAT) family C4901_00895 PF03109 C4901_00895 C4901_00900 PF02036 SCP-2 sterol transfer family C4901_00905 PF06271 C4901_00905 C4901_00910 PF01209 ubiE/COQ5 methyltransferase family C4901_00915 PF06155 Protein of unknown function (DUF971) C4901_00920 PF00072 Response regulator receiver domain C4901_00920 PF00486 Transcriptional regulatory protein, C terminal C4901_00925 PF00512 His Kinase A (phospho-acceptor) domain C4901_00925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_00925 PF11808 C4901_00925 C4901_00925 PF13188 PAS domain C4901_00930 PF00924 Mechanosensitive ion channel C4901_00935 PF04338 Protein of unknown function, DUF481 C4901_00945 PF00392 Bacterial regulatory proteins, gntR family C4901_00945 PF07702 UTRA domain C4901_00955 PF00392 Bacterial regulatory proteins, gntR family C4901_00955 PF07702 UTRA domain C4901_00960 PF00890 FAD binding domain C4901_00960 PF02910 Fumarate reductase flavoprotein C-term C4901_00965 PF13187 4Fe-4S dicluster domain C4901_00970 PF13646 HEAT repeats C4901_00975 PF11953 Domain of unknown function (DUF3470) C4901_00980 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_00985 PF12674 C4901_00985 C4901_00990 PF09084 NMT1/THI5 like C4901_00995 PF00528 Binding-protein-dependent transport system inner membrane component C4901_01000 PF00005 ABC transporter C4901_01005 PF03573 outer membrane porin, OprD family C4901_01010 PF00005 ABC transporter C4901_01015 PF01895 PhoU domain C4901_01020 PF00490 Delta-aminolevulinic acid dehydratase C4901_01025 PF00406 Adenylate kinase C4901_01025 PF05191 Adenylate kinase, active site lid C4901_01035 PF00365 Phosphofructokinase C4901_01045 PF03030 Inorganic H+ pyrophosphatase C4901_01050 PF12850 Calcineurin-like phosphoesterase superfamily domain C4901_01060 PF13231 C4901_01060 C4901_01065 PF00892 EamA-like transporter family C4901_01070 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C4901_01075 PF00535 Glycosyl transferase family 2 C4901_01080 PF00551 Formyl transferase C4901_01080 PF02911 Formyl transferase, C-terminal domain C4901_01085 PF01370 NAD dependent epimerase/dehydratase family C4901_01090 PF01522 Polysaccharide deacetylase C4901_01095 PF00270 DEAD/DEAH box helicase C4901_01095 PF00271 Helicase conserved C-terminal domain C4901_01095 PF04408 Helicase associated domain (HA2) C4901_01095 PF08482 C4901_01095 C4901_01100 PF04055 Radical SAM superfamily C4901_01100 PF06968 Biotin and Thiamin Synthesis associated domain C4901_01105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4901_01105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4901_01105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4901_01110 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4901_01125 PF00483 Nucleotidyl transferase C4901_01130 PF01636 Phosphotransferase enzyme family C4901_01135 PF04453 Organic solvent tolerance protein C4901_01140 PF00639 PPIC-type PPIASE domain C4901_01140 PF09312 SurA N-terminal domain C4901_01140 PF13616 PPIC-type PPIASE domain C4901_01145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA C4901_01150 PF00398 Ribosomal RNA adenine dimethylase C4901_01160 PF01553 Acyltransferase C4901_01165 PF13242 HAD-hyrolase-like C4901_01170 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C4901_01175 PF02092 C4901_01175 C4901_01175 PF05746 DALR anticodon binding domain C4901_01180 PF02091 Glycyl-tRNA synthetase alpha subunit C4901_01185 PF00912 Transglycosylase C4901_01190 PF02568 Thiamine biosynthesis protein (ThiI) C4901_01195 PF01206 Sulfurtransferase TusA C4901_01200 PF01545 Cation efflux family C4901_01200 PF16916 C4901_01200 C4901_01205 PF00120 Glutamine synthetase, catalytic domain C4901_01205 PF03951 Glutamine synthetase, beta-Grasp domain C4901_01215 PF10282 Lactonase, 7-bladed beta-propeller C4901_01220 PF00027 Cyclic nucleotide-binding domain C4901_01220 PF13545 Crp-like helix-turn-helix domain C4901_01225 PF01850 PIN domain C4901_01245 PF01047 MarR family C4901_01250 PF01814 Hemerythrin HHE cation binding domain C4901_01255 PF10006 C4901_01255 C4901_01260 PF05940 C4901_01260 C4901_01270 PF04055 Radical SAM superfamily C4901_01270 PF13353 4Fe-4S single cluster domain C4901_01275 PF13597 Anaerobic ribonucleoside-triphosphate reductase C4901_01280 PF03477 ATP cone domain C4901_01280 PF13597 Anaerobic ribonucleoside-triphosphate reductase C4901_01285 PF04055 Radical SAM superfamily C4901_01290 PF04055 Radical SAM superfamily C4901_01290 PF16199 C4901_01290 C4901_01295 PF01136 C4901_01295 C4901_01300 PF01136 C4901_01300 C4901_01305 PF01976 C4901_01305 C4901_01325 PF02036 SCP-2 sterol transfer family C4901_01330 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase C4901_01335 PF04055 Radical SAM superfamily C4901_01335 PF06969 HemN C-terminal domain C4901_01340 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4901_01345 PF03060 Nitronate monooxygenase C4901_01350 PF10006 C4901_01350 C4901_01355 PF03006 C4901_01355 C4901_01365 PF07332 C4901_01365 C4901_01375 PF02698 DUF218 domain C4901_01380 PF04055 Radical SAM superfamily C4901_01385 PF03099 Biotin/lipoate A/B protein ligase family C4901_01395 PF12323 C4901_01395 C4901_01410 PF04359 Protein of unknown function (DUF493) C4901_01415 PF01063 Aminotransferase class IV C4901_01420 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel C4901_01420 PF05036 Sporulation related domain C4901_01425 PF01098 C4901_01425 C4901_01430 PF00905 Penicillin binding protein transpeptidase domain C4901_01430 PF03717 Penicillin-binding Protein dimerisation domain C4901_01435 PF04093 C4901_01435 C4901_01440 PF04085 rod shape-determining protein MreC C4901_01445 PF06723 MreB/Mbl protein C4901_01450 PF02686 Glu-tRNAGln amidotransferase C subunit C4901_01455 PF01425 Amidase C4901_01460 PF02637 GatB domain C4901_01460 PF02934 GatB/GatE catalytic domain C4901_01480 PF07804 HipA-like C-terminal domain C4901_01480 PF13657 HipA N-terminal domain C4901_01485 PF13560 Helix-turn-helix domain C4901_01495 PF14236 C4901_01495 C4901_01500 PF01609 Transposase DDE domain C4901_01505 PF08241 Methyltransferase domain C4901_01510 PF01609 Transposase DDE domain C4901_01520 PF07592 C4901_01520 C4901_01530 PF05768 Glutaredoxin-like domain (DUF836) C4901_01535 PF07728 AAA domain (dynein-related subfamily) C4901_01535 PF08406 C4901_01535 C4901_01540 PF12831 FAD dependent oxidoreductase C4901_01545 PF02662 C4901_01545 C4901_01545 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_01545 PF13187 4Fe-4S dicluster domain C4901_01550 PF13183 4Fe-4S dicluster domain C4901_01555 PF02754 C4901_01555 C4901_01560 PF01381 Helix-turn-helix C4901_01565 PF01381 Helix-turn-helix C4901_01570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4901_01575 PF13520 Amino acid permease C4901_01580 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4901_01585 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_01590 PF01850 PIN domain C4901_01595 PF00730 HhH-GPD superfamily base excision DNA repair protein C4901_01595 PF06029 AlkA N-terminal domain C4901_01600 PF01566 C4901_01600 C4901_01605 PF00512 His Kinase A (phospho-acceptor) domain C4901_01605 PF00989 PAS fold C4901_01605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_01610 PF00072 Response regulator receiver domain C4901_01610 PF00158 Sigma-54 interaction domain C4901_01610 PF02954 Bacterial regulatory protein, Fis family C4901_01615 PF03886 Protein of unknown function (DUF330) C4901_01620 PF02470 C4901_01620 C4901_01625 PF00005 ABC transporter C4901_01630 PF02405 C4901_01630 C4901_01635 PF01494 FAD binding domain C4901_01640 PF01494 FAD binding domain C4901_01645 PF00557 Metallopeptidase family M24 C4901_01645 PF05195 Aminopeptidase P, N-terminal domain C4901_01650 PF03695 Uncharacterised protein family (UPF0149) C4901_01655 PF05164 Cell division protein ZapA C4901_01665 PF01812 5-formyltetrahydrofolate cyclo-ligase family C4901_01670 PF13277 YmdB-like protein C4901_01675 PF01878 EVE domain C4901_01680 PF13417 Glutathione S-transferase, N-terminal domain C4901_01690 PF00291 Pyridoxal-phosphate dependent enzyme C4901_01690 PF00585 C-terminal regulatory domain of Threonine dehydratase C4901_01695 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein C4901_01700 PF00563 EAL domain C4901_01700 PF00672 HAMP domain C4901_01700 PF00990 GGDEF domain C4901_01710 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) C4901_01715 PF00107 Zinc-binding dehydrogenase C4901_01720 PF00085 Thioredoxin C4901_01725 PF00588 SpoU rRNA Methylase family C4901_01730 PF07963 Prokaryotic N-terminal methylation motif C4901_01740 PF07963 Prokaryotic N-terminal methylation motif C4901_01745 PF07963 Prokaryotic N-terminal methylation motif C4901_01755 PF00437 Type II/IV secretion system protein C4901_01755 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4901_01760 PF00482 Type II secretion system (T2SS), protein F C4901_01780 PF00263 C4901_01780 C4901_01780 PF07655 C4901_01780 C4901_01785 PF13401 AAA domain C4901_01795 PF14559 Tetratricopeptide repeat C4901_01805 PF00155 Aminotransferase class I and II C4901_01810 PF12146 Putative lysophospholipase C4901_01815 PF08241 Methyltransferase domain C4901_01820 PF13302 Acetyltransferase (GNAT) domain C4901_01855 PF03743 Bacterial conjugation TrbI-like protein C4901_01880 PF14602 Hexapeptide repeat of succinyl-transferase C4901_01885 PF04542 Sigma-70 region 2 C4901_01885 PF04545 Sigma-70, region 4 C4901_01895 PF00005 ABC transporter C4901_01900 PF00448 SRP54-type protein, GTPase domain C4901_01900 PF02881 SRP54-type protein, helical bundle domain C4901_01905 PF00037 4Fe-4S binding domain C4901_01910 PF01467 Cytidylyltransferase C4901_01915 PF03602 Conserved hypothetical protein 95 C4901_01920 PF00654 Voltage gated chloride channel C4901_01925 PF00350 Dynamin family C4901_01930 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain C4901_01930 PF06827 Zinc finger found in FPG and IleRS C4901_01930 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain C4901_01940 PF09822 C4901_01940 C4901_01945 PF12679 C4901_01945 C4901_01950 PF00005 ABC transporter C4901_01955 PF00111 2Fe-2S iron-sulfur cluster binding domain C4901_01955 PF00175 Oxidoreductase NAD-binding domain C4901_01955 PF00970 Oxidoreductase FAD-binding domain C4901_01960 PF01545 Cation efflux family C4901_01965 PF13173 AAA domain C4901_01965 PF13635 C4901_01965 C4901_01975 PF01850 PIN domain C4901_01980 PF09957 C4901_01980 C4901_01985 PF09002 Domain of unknown function (DUF1887) C4901_01990 PF09652 C4901_01990 C4901_01995 PF05168 HEPN domain C4901_02000 PF01909 Nucleotidyltransferase domain C4901_02005 PF09623 C4901_02005 C4901_02010 PF10040 Uncharacterized conserved protein (DUF2276) C4901_02015 PF09903 C4901_02015 C4901_02025 PF12469 CRISPR-associated protein C4901_02030 PF09700 CRISPR-associated protein (Cas_Cmr3) C4901_02035 PF03787 RAMP superfamily C4901_02040 PF09701 CRISPR-associated protein (Cas_Cmr5) C4901_02045 PF03787 RAMP superfamily C4901_02055 PF07592 C4901_02055 C4901_02065 PF09455 CRISPR-associated (Cas) DxTHG family C4901_02070 PF05685 Putative restriction endonuclease C4901_02075 PF09827 CRISPR associated protein Cas2 C4901_02080 PF01867 CRISPR associated protein Cas1 C4901_02085 PF01867 CRISPR associated protein Cas1 C4901_02090 PF09827 CRISPR associated protein Cas2 C4901_02125 PF13384 Homeodomain-like domain C4901_02130 PF02195 ParB-like nuclease domain C4901_02140 PF01610 C4901_02140 C4901_02155 PF07219 C4901_02155 C4901_02160 PF04375 C4901_02160 C4901_02165 PF02602 Uroporphyrinogen-III synthase HemD C4901_02170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C4901_02170 PF03900 Porphobilinogen deaminase, C-terminal domain C4901_02175 PF02635 DsrE/DsrF-like family C4901_02190 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ C4901_02195 PF12643 C4901_02195 C4901_02200 PF00083 Sugar (and other) transporter C4901_02205 PF00581 Rhodanese-like domain C4901_02205 PF12840 Helix-turn-helix domain C4901_02210 PF01925 C4901_02210 C4901_02220 PF00206 Lyase C4901_02220 PF14698 Argininosuccinate lyase C-terminal C4901_02225 PF06580 C4901_02225 C4901_02230 PF00072 Response regulator receiver domain C4901_02230 PF04397 LytTr DNA-binding domain C4901_02240 PF00535 Glycosyl transferase family 2 C4901_02245 PF00857 Isochorismatase family C4901_02250 PF05977 Transmembrane secretion effector C4901_02255 PF02222 ATP-grasp domain C4901_02265 PF01850 PIN domain C4901_02270 PF03843 C4901_02270 C4901_02275 PF03843 C4901_02275 C4901_02280 PF00004 ATPase family associated with various cellular activities (AAA) C4901_02280 PF02190 ATP-dependent protease La (LON) domain C4901_02280 PF05362 Lon protease (S16) C-terminal proteolytic domain C4901_02290 PF01491 Frataxin-like domain C4901_02295 PF03435 Saccharopine dehydrogenase C4901_02300 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C4901_02300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C4901_02305 PF01678 Diaminopimelate epimerase C4901_02310 PF04340 Protein of unknown function, DUF484 C4901_02315 PF00589 Phage integrase family C4901_02315 PF02899 Phage integrase, N-terminal SAM-like domain C4901_02325 PF00227 Proteasome subunit C4901_02330 PF00004 ATPase family associated with various cellular activities (AAA) C4901_02330 PF07724 AAA domain (Cdc48 subfamily) C4901_02335 PF00122 E1-E2 ATPase C4901_02335 PF00690 Cation transporter/ATPase, N-terminus C4901_02335 PF00702 haloacid dehalogenase-like hydrolase C4901_02340 PF00571 CBS domain C4901_02345 PF00011 Hsp20/alpha crystallin family C4901_02350 PF00696 Amino acid kinase family C4901_02360 PF00440 Bacterial regulatory proteins, tetR family C4901_02375 PF00899 ThiF family C4901_02380 PF05175 Methyltransferase small domain C4901_02385 PF00472 RF-1 domain C4901_02385 PF03462 PCRF domain C4901_02390 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain C4901_02390 PF01488 Shikimate / quinate 5-dehydrogenase C4901_02390 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain C4901_02400 PF13432 Tetratricopeptide repeat C4901_02405 PF03550 Outer membrane lipoprotein LolB C4901_02410 PF00288 GHMP kinases N terminal domain C4901_02410 PF08544 GHMP kinases C terminal C4901_02420 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C4901_02420 PF14572 Phosphoribosyl synthetase-associated domain C4901_02425 PF01386 Ribosomal L25p family C4901_02425 PF14693 Ribosomal protein TL5, C-terminal domain C4901_02430 PF01195 Peptidyl-tRNA hydrolase C4901_02435 PF01926 50S ribosome-binding GTPase C4901_02435 PF06071 Protein of unknown function (DUF933) C4901_02445 PF00589 Phage integrase family C4901_02465 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_02475 PF05015 Plasmid maintenance system killer protein C4901_02480 PF01381 Helix-turn-helix C4901_02485 PF01609 Transposase DDE domain C4901_02495 PF13808 C4901_02495 C4901_02495 PF14236 C4901_02495 C4901_02505 PF13310 C4901_02505 C4901_02510 PF13310 C4901_02510 C4901_02515 PF00176 SNF2 family N-terminal domain C4901_02515 PF00271 Helicase conserved C-terminal domain C4901_02515 PF12419 C4901_02515 C4901_02525 PF01385 C4901_02525 C4901_02525 PF12323 C4901_02525 C4901_02530 PF01797 Transposase IS200 like C4901_02535 PF01797 Transposase IS200 like C4901_02540 PF04168 C4901_02540 C4901_02545 PF14403 C4901_02545 C4901_02550 PF00227 Proteasome subunit C4901_02555 PF01841 Transglutaminase-like superfamily C4901_02555 PF08379 C4901_02555 C4901_02560 PF10722 Putative bacterial sensory transduction regulator C4901_02565 PF13560 Helix-turn-helix domain C4901_02570 PF02641 Uncharacterized ACR, COG1993 C4901_02575 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_02580 PF00037 4Fe-4S binding domain C4901_02580 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4901_02585 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C4901_02585 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C4901_02585 PF00374 Nickel-dependent hydrogenase C4901_02590 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_02600 PF00146 NADH dehydrogenase C4901_02605 PF00034 Cytochrome c C4901_02610 PF00034 Cytochrome c C4901_02620 PF02254 TrkA-N domain C4901_02620 PF07885 Ion channel C4901_02645 PF00085 Thioredoxin C4901_02645 PF14559 Tetratricopeptide repeat C4901_02650 PF03631 C4901_02650 C4901_02655 PF02445 Quinolinate synthetase A protein C4901_02665 PF00293 NUDIX domain C4901_02665 PF14803 Nudix N-terminal C4901_02670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C4901_02670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C4901_02675 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4901_02675 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase C4901_02680 PF00313 'Cold-shock' DNA-binding domain C4901_02685 PF02566 OsmC-like protein C4901_02690 PF01565 FAD binding domain C4901_02690 PF02913 FAD linked oxidases, C-terminal domain C4901_02695 PF01565 FAD binding domain C4901_02700 PF02754 C4901_02700 C4901_02700 PF13183 4Fe-4S dicluster domain C4901_02705 PF00227 Proteasome subunit C4901_02710 PF02872 5'-nucleotidase, C-terminal domain C4901_02715 PF00919 Uncharacterized protein family UPF0004 C4901_02715 PF01938 TRAM domain C4901_02715 PF04055 Radical SAM superfamily C4901_02720 PF02562 PhoH-like protein C4901_02725 PF02130 Uncharacterized protein family UPF0054 C4901_02730 PF00571 CBS domain C4901_02730 PF03471 Transporter associated domain C4901_02735 PF00795 Carbon-nitrogen hydrolase C4901_02740 PF13808 C4901_02740 C4901_02740 PF14236 C4901_02740 C4901_02750 PF01548 C4901_02750 C4901_02750 PF02371 C4901_02750 C4901_02760 PF07282 C4901_02760 C4901_02795 PF01206 Sulfurtransferase TusA C4901_02810 PF00753 Metallo-beta-lactamase superfamily C4901_02815 PF04273 Putative phosphatase (DUF442) C4901_02820 PF13808 C4901_02820 C4901_02820 PF14236 C4901_02820 C4901_02830 PF00133 tRNA synthetases class I (I, L, M and V) C4901_02830 PF08264 Anticodon-binding domain of tRNA C4901_02830 PF09334 tRNA synthetases class I (M) C4901_02830 PF13603 Leucyl-tRNA synthetase, Domain 2 C4901_02835 PF04390 Lipopolysaccharide-assembly C4901_02840 PF06144 DNA polymerase III, delta subunit C4901_02840 PF14840 Processivity clamp loader gamma complex DNA pol III C-term C4901_02845 PF00171 Aldehyde dehydrogenase family C4901_02850 PF01467 Cytidylyltransferase C4901_02855 PF02410 Oligomerisation domain C4901_02860 PF02590 Predicted SPOUT methyltransferase C4901_02865 PF02545 Maf-like protein C4901_02870 PF10150 Ribonuclease E/G family C4901_02875 PF13116 C4901_02875 C4901_02875 PF13502 C4901_02875 C4901_02880 PF00795 Carbon-nitrogen hydrolase C4901_02885 PF01523 Putative modulator of DNA gyrase C4901_02890 PF01523 Putative modulator of DNA gyrase C4901_02900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4901_02900 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_02920 PF12635 C4901_02920 C4901_02925 PF00665 Integrase core domain C4901_02935 PF14487 C4901_02935 C4901_02945 PF01850 PIN domain C4901_02960 PF00391 PEP-utilising enzyme, mobile domain C4901_02960 PF02896 PEP-utilising enzyme, TIM barrel domain C4901_02960 PF05524 PEP-utilising enzyme, N-terminal C4901_02965 PF00381 PTS HPr component phosphorylation site C4901_02970 PF03610 PTS system fructose IIA component C4901_02975 PF03668 C4901_02975 C4901_02980 PF02603 HPr Serine kinase N terminus C4901_02980 PF07475 HPr Serine kinase C-terminal domain C4901_02985 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C4901_02990 PF00309 C4901_02990 C4901_02990 PF04552 Sigma-54, DNA binding domain C4901_02990 PF04963 Sigma-54 factor, core binding domain C4901_02995 PF00005 ABC transporter C4901_02995 PF12399 Branched-chain amino acid ATP-binding cassette transporter C4901_03000 PF03968 OstA-like protein C4901_03005 PF06835 Lipopolysaccharide-assembly, LptC-related C4901_03010 PF08282 haloacid dehalogenase-like hydrolase C4901_03015 PF00571 CBS domain C4901_03015 PF01380 SIS domain C4901_03025 PF00005 ABC transporter C4901_03030 PF01061 C4901_03030 C4901_03035 PF01370 NAD dependent epimerase/dehydratase family C4901_03045 PF02452 PemK-like protein C4901_03050 PF01402 Ribbon-helix-helix protein, copG family C4901_03065 PF10282 Lactonase, 7-bladed beta-propeller C4901_03085 PF00005 ABC transporter C4901_03090 PF02405 C4901_03090 C4901_03095 PF02470 C4901_03095 C4901_03100 PF05494 Toluene tolerance, Ttg2 C4901_03105 PF13466 STAS domain C4901_03110 PF00005 ABC transporter C4901_03115 PF01061 C4901_03115 C4901_03120 PF01722 BolA-like protein C4901_03125 PF00462 Glutaredoxin C4901_03130 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4901_03135 PF01634 ATP phosphoribosyltransferase C4901_03140 PF00815 Histidinol dehydrogenase C4901_03145 PF00155 Aminotransferase class I and II C4901_03150 PF00475 Imidazoleglycerol-phosphate dehydratase C4901_03155 PF00117 Glutamine amidotransferase class-I C4901_03160 PF00977 Histidine biosynthesis protein C4901_03165 PF00977 Histidine biosynthesis protein C4901_03170 PF01502 Phosphoribosyl-AMP cyclohydrolase C4901_03175 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C4901_03180 PF01230 HIT domain C4901_03185 PF02416 mttA/Hcf106 family C4901_03190 PF02416 mttA/Hcf106 family C4901_03195 PF00902 Sec-independent protein translocase protein (TatC) C4901_03200 PF00083 Sugar (and other) transporter C4901_03205 PF00534 Glycosyl transferases group 1 C4901_03205 PF13439 Glycosyltransferase Family 4 C4901_03210 PF12850 Calcineurin-like phosphoesterase superfamily domain C4901_03215 PF13180 PDZ domain C4901_03215 PF13365 Trypsin-like peptidase domain C4901_03220 PF13410 Glutathione S-transferase, C-terminal domain C4901_03220 PF13417 Glutathione S-transferase, N-terminal domain C4901_03225 PF04386 Stringent starvation protein B C4901_03235 PF13229 Right handed beta helix region C4901_03250 PF01565 FAD binding domain C4901_03250 PF02913 FAD linked oxidases, C-terminal domain C4901_03255 PF01467 Cytidylyltransferase C4901_03260 PF04972 BON domain C4901_03265 PF13580 SIS domain C4901_03270 PF04348 LppC putative lipoprotein C4901_03275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4901_03290 PF00034 Cytochrome c C4901_03295 PF00106 short chain dehydrogenase C4901_03305 PF00032 Cytochrome b(C-terminal)/b6/petD C4901_03305 PF00033 Cytochrome b(N-terminal)/b6/petB C4901_03310 PF02167 Cytochrome C1 family C4901_03315 PF02353 Mycolic acid cyclopropane synthetase C4901_03320 PF00113 Enolase, C-terminal TIM barrel domain C4901_03320 PF03952 Enolase, N-terminal domain C4901_03330 PF07690 Major Facilitator Superfamily C4901_03335 PF00004 ATPase family associated with various cellular activities (AAA) C4901_03340 PF00563 EAL domain C4901_03340 PF00990 GGDEF domain C4901_03340 PF13185 GAF domain C4901_03345 PF00923 Transaldolase C4901_03355 PF02381 MraZ protein C4901_03360 PF01795 MraW methylase family C4901_03365 PF04999 C4901_03365 C4901_03370 PF00905 Penicillin binding protein transpeptidase domain C4901_03370 PF03717 Penicillin-binding Protein dimerisation domain C4901_03375 PF01225 Mur ligase family, catalytic domain C4901_03375 PF02875 Mur ligase family, glutamate ligase domain C4901_03375 PF08245 Mur ligase middle domain C4901_03380 PF01225 Mur ligase family, catalytic domain C4901_03380 PF02875 Mur ligase family, glutamate ligase domain C4901_03380 PF08245 Mur ligase middle domain C4901_03385 PF00953 Glycosyl transferase family 4 C4901_03385 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C4901_03390 PF02875 Mur ligase family, glutamate ligase domain C4901_03390 PF08245 Mur ligase middle domain C4901_03395 PF01098 C4901_03395 C4901_03400 PF03033 Glycosyltransferase family 28 N-terminal domain C4901_03400 PF04101 Glycosyltransferase family 28 C-terminal domain C4901_03405 PF01225 Mur ligase family, catalytic domain C4901_03405 PF02875 Mur ligase family, glutamate ligase domain C4901_03405 PF08245 Mur ligase middle domain C4901_03410 PF01565 FAD binding domain C4901_03410 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C4901_03415 PF01820 D-ala D-ala ligase N-terminus C4901_03415 PF07478 D-ala D-ala ligase C-terminus C4901_03420 PF03799 Cell division protein FtsQ C4901_03420 PF08478 POTRA domain, FtsQ-type C4901_03425 PF02491 SHS2 domain inserted in FTSA C4901_03425 PF14450 Cell division protein FtsA C4901_03430 PF00091 Tubulin/FtsZ family, GTPase domain C4901_03430 PF12327 FtsZ family, C-terminal domain C4901_03435 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase C4901_03445 PF01551 Peptidase family M23 C4901_03450 PF01043 SecA preprotein cross-linking domain C4901_03450 PF02810 SEC-C motif C4901_03450 PF07516 SecA Wing and Scaffold domain C4901_03450 PF07517 SecA DEAD-like domain C4901_03455 PF01960 ArgJ family C4901_03460 PF00293 NUDIX domain C4901_03460 PF02581 Thiamine monophosphate synthase/TENI C4901_03475 PF01609 Transposase DDE domain C4901_03480 PF13808 C4901_03480 C4901_03480 PF14236 C4901_03480 C4901_03485 PF14236 C4901_03485 C4901_03495 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C4901_03500 PF02661 Fic/DOC family C4901_03525 PF00472 RF-1 domain C4901_03530 PF00583 Acetyltransferase (GNAT) family C4901_03535 PF00484 Carbonic anhydrase C4901_03545 PF00158 Sigma-54 interaction domain C4901_03545 PF02954 Bacterial regulatory protein, Fis family C4901_03555 PF00071 Ras family C4901_03560 PF00005 ABC transporter C4901_03560 PF00782 Dual specificity phosphatase, catalytic domain C4901_03570 PF03259 Roadblock/LC7 domain C4901_03575 PF00056 lactate/malate dehydrogenase, NAD binding domain C4901_03575 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C4901_03585 PF01121 Dephospho-CoA kinase C4901_03590 PF01478 Type IV leader peptidase family C4901_03590 PF06750 C4901_03590 C4901_03595 PF00437 Type II/IV secretion system protein C4901_03595 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4901_03600 PF02915 Rubrerythrin C4901_03605 PF02754 C4901_03605 C4901_03615 PF12007 Protein of unknown function (DUF3501) C4901_03620 PF00204 DNA gyrase B C4901_03620 PF00986 DNA gyrase B subunit, carboxyl terminus C4901_03620 PF01751 Toprim domain C4901_03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_03625 PF00521 DNA gyrase/topoisomerase IV, subunit A C4901_03630 PF01416 tRNA pseudouridine synthase C4901_03635 PF01609 Transposase DDE domain C4901_03640 PF01022 Bacterial regulatory protein, arsR family C4901_03650 PF02040 C4901_03650 C4901_03655 PF02040 C4901_03655 C4901_03660 PF01548 C4901_03660 C4901_03665 PF00990 GGDEF domain C4901_03670 PF13542 C4901_03670 C4901_03675 PF01610 C4901_03675 C4901_03680 PF01402 Ribbon-helix-helix protein, copG family C4901_03685 PF13470 C4901_03685 C4901_03690 PF14236 C4901_03690 C4901_03695 PF13358 DDE superfamily endonuclease C4901_03720 PF00691 OmpA family C4901_03725 PF02040 C4901_03725 C4901_03730 PF02562 PhoH-like protein C4901_03730 PF13638 PIN domain C4901_03735 PF00578 AhpC/TSA family C4901_03740 PF00072 Response regulator receiver domain C4901_03740 PF00512 His Kinase A (phospho-acceptor) domain C4901_03740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_03740 PF13185 GAF domain C4901_03745 PF00072 Response regulator receiver domain C4901_03745 PF00512 His Kinase A (phospho-acceptor) domain C4901_03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_03745 PF08448 PAS fold C4901_03755 PF14236 C4901_03755 C4901_03760 PF00072 Response regulator receiver domain C4901_03765 PF00701 Dihydrodipicolinate synthetase family C4901_03770 PF02769 AIR synthase related protein, C-terminal domain C4901_03770 PF13507 CobB/CobQ-like glutamine amidotransferase domain C4901_03775 PF03099 Biotin/lipoate A/B protein ligase family C4901_03780 PF00027 Cyclic nucleotide-binding domain C4901_03780 PF13545 Crp-like helix-turn-helix domain C4901_03785 PF01597 Glycine cleavage H-protein C4901_03790 PF01814 Hemerythrin HHE cation binding domain C4901_03795 PF01814 Hemerythrin HHE cation binding domain C4901_03800 PF13192 Thioredoxin domain C4901_03805 PF04343 C4901_03805 C4901_03810 PF05425 C4901_03810 C4901_03815 PF00005 ABC transporter C4901_03815 PF00664 ABC transporter transmembrane region C4901_03820 PF00005 ABC transporter C4901_03820 PF12848 ABC transporter C4901_03830 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4901_03830 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4901_03835 PF00202 Aminotransferase class-III C4901_03840 PF00883 Cytosol aminopeptidase family, catalytic domain C4901_03845 PF00676 Dehydrogenase E1 component C4901_03850 PF02779 Transketolase, pyrimidine binding domain C4901_03850 PF02780 Transketolase, C-terminal domain C4901_03855 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C4901_03855 PF00364 Biotin-requiring enzyme C4901_03855 PF02817 e3 binding domain C4901_03855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4901_03855 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_03860 PF00764 Arginosuccinate synthase C4901_03865 PF00512 His Kinase A (phospho-acceptor) domain C4901_03865 PF00989 PAS fold C4901_03870 PF00583 Acetyltransferase (GNAT) family C4901_03875 PF09924 Uncharacterized conserved protein (DUF2156) C4901_03880 PF08897 C4901_03880 C4901_03885 PF08495 C4901_03885 C4901_03885 PF10442 C4901_03885 C4901_03890 PF00633 Helix-hairpin-helix motif C4901_03890 PF00730 HhH-GPD superfamily base excision DNA repair protein C4901_03890 PF10576 Iron-sulfur binding domain of endonuclease III C4901_03905 PF06508 Queuosine biosynthesis protein QueC C4901_03910 PF00873 AcrB/AcrD/AcrF family C4901_03915 PF16576 C4901_03915 C4901_03920 PF02321 Outer membrane efflux protein C4901_03930 PF01385 C4901_03930 C4901_03935 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_03950 PF01588 Putative tRNA binding domain C4901_03950 PF09334 tRNA synthetases class I (M) C4901_03955 PF07282 C4901_03955 C4901_03965 PF01883 Domain of unknown function DUF59 C4901_03965 PF10609 ParA/MinD ATPase like C4901_03970 PF00692 dUTPase C4901_03970 PF14890 Intein splicing domain C4901_03975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_03975 PF03459 TOBE domain C4901_03980 PF03573 outer membrane porin, OprD family C4901_03985 PF13531 Bacterial extracellular solute-binding protein C4901_03990 PF00107 Zinc-binding dehydrogenase C4901_03990 PF08240 Alcohol dehydrogenase GroES-like domain C4901_03995 PF02635 DsrE/DsrF-like family C4901_04000 PF03625 Domain of unknown function DUF302 C4901_04005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4901_04005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4901_04005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4901_04005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4901_04010 PF00692 dUTPase C4901_04015 PF02441 Flavoprotein C4901_04015 PF04127 DNA / pantothenate metabolism flavoprotein C4901_04020 PF04002 RadC-like JAB domain C4901_04030 PF00384 Molybdopterin oxidoreductase C4901_04030 PF01568 Molydopterin dinucleotide binding domain C4901_04030 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4901_04030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C4901_04030 PF12838 4Fe-4S dicluster domain C4901_04030 PF13510 2Fe-2S iron-sulfur cluster binding domain C4901_04035 PF00830 Ribosomal L28 family C4901_04040 PF00471 Ribosomal protein L33 C4901_04045 PF14279 C4901_04045 C4901_04050 PF00487 C4901_04050 C4901_04050 PF01610 C4901_04050 C4901_04060 PF00293 NUDIX domain C4901_04065 PF10282 Lactonase, 7-bladed beta-propeller C4901_04075 PF04542 Sigma-70 region 2 C4901_04075 PF08281 Sigma-70, region 4 C4901_04080 PF00551 Formyl transferase C4901_04085 PF00586 AIR synthase related protein, N-terminal domain C4901_04085 PF02769 AIR synthase related protein, C-terminal domain C4901_04090 PF01066 CDP-alcohol phosphatidyltransferase C4901_04095 PF01594 C4901_04095 C4901_04100 PF00308 Bacterial dnaA protein C4901_04105 PF03358 NADPH-dependent FMN reductase C4901_04110 PF00206 Lyase C4901_04110 PF10415 Fumarase C C-terminus C4901_04115 PF00459 Inositol monophosphatase family C4901_04120 PF05724 Thiopurine S-methyltransferase (TPMT) C4901_04125 PF11004 C4901_04125 C4901_04135 PF01106 NifU-like domain C4901_04145 PF00550 Phosphopantetheine attachment site C4901_04150 PF00072 Response regulator receiver domain C4901_04150 PF00990 GGDEF domain C4901_04155 PF04338 Protein of unknown function, DUF481 C4901_04160 PF07690 Major Facilitator Superfamily C4901_04165 PF12840 Helix-turn-helix domain C4901_04175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4901_04180 PF00152 tRNA synthetases class II (D, K and N) C4901_04185 PF01132 Elongation factor P (EF-P) OB domain C4901_04185 PF08207 Elongation factor P (EF-P) KOW-like domain C4901_04185 PF09285 Elongation factor P, C-terminal C4901_04190 PF13353 4Fe-4S single cluster domain C4901_04200 PF00578 AhpC/TSA family C4901_04200 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4901_04205 PF00708 Acylphosphatase C4901_04210 PF14213 C4901_04210 C4901_04215 PF01464 Transglycosylase SLT domain C4901_04220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4901_04220 PF03129 Anticodon binding domain C4901_04220 PF04073 Aminoacyl-tRNA editing domain C4901_04230 PF05717 C4901_04230 C4901_04235 PF03050 C4901_04235 C4901_04235 PF13007 C4901_04235 C4901_04270 PF00480 ROK family C4901_04275 PF00117 Glutamine amidotransferase class-I C4901_04280 PF07690 Major Facilitator Superfamily C4901_04285 PF00582 Universal stress protein family C4901_04290 PF00529 HlyD family secretion protein C4901_04290 PF16576 C4901_04290 C4901_04295 PF12802 MarR family C4901_04300 PF02649 Type I GTP cyclohydrolase folE2 C4901_04305 PF02779 Transketolase, pyrimidine binding domain C4901_04305 PF02780 Transketolase, C-terminal domain C4901_04305 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C4901_04310 PF00348 Polyprenyl synthetase C4901_04315 PF02609 Exonuclease VII small subunit C4901_04320 PF00924 Mechanosensitive ion channel C4901_04325 PF00719 Inorganic pyrophosphatase C4901_04365 PF04014 Antidote-toxin recognition MazE C4901_04370 PF01850 PIN domain C4901_04375 PF05119 C4901_04375 C4901_04390 PF00248 Aldo/keto reductase family C4901_04395 PF00248 Aldo/keto reductase family C4901_04400 PF13460 NADH(P)-binding C4901_04405 PF07883 Cupin domain C4901_04410 PF00107 Zinc-binding dehydrogenase C4901_04410 PF08240 Alcohol dehydrogenase GroES-like domain C4901_04415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_04415 PF03466 LysR substrate binding domain C4901_04425 PF01668 SmpB protein C4901_04430 PF00209 Sodium:neurotransmitter symporter family C4901_04435 PF03364 Polyketide cyclase / dehydrase and lipid transport C4901_04440 PF03658 RnfH family Ubiquitin C4901_04445 PF04355 SmpA / OmlA family C4901_04450 PF01475 Ferric uptake regulator family C4901_04455 PF00583 Acetyltransferase (GNAT) family C4901_04460 PF02463 RecF/RecN/SMC N terminal domain C4901_04465 PF01513 ATP-NAD kinase C4901_04470 PF01628 HrcA protein C terminal domain C4901_04470 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding C4901_04475 PF01025 GrpE C4901_04480 PF00012 Hsp70 protein C4901_04485 PF00226 DnaJ domain C4901_04485 PF00684 DnaJ central domain C4901_04485 PF01556 DnaJ C terminal domain C4901_04490 PF02635 DsrE/DsrF-like family C4901_04495 PF01113 Dihydrodipicolinate reductase, N-terminus C4901_04495 PF05173 Dihydrodipicolinate reductase, C-terminus C4901_04500 PF00117 Glutamine amidotransferase class-I C4901_04500 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C4901_04505 PF02142 MGS-like domain C4901_04505 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4901_04505 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C4901_04510 PF01272 Transcription elongation factor, GreA/GreB, C-term C4901_04510 PF03449 Transcription elongation factor, N-terminal C4901_04520 PF01728 FtsJ-like methyltransferase C4901_04525 PF00004 ATPase family associated with various cellular activities (AAA) C4901_04525 PF01434 Peptidase family M41 C4901_04525 PF06480 FtsH Extracellular C4901_04530 PF00809 Pterin binding enzyme C4901_04535 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C4901_04535 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C4901_04535 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C4901_04535 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C4901_04540 PF00121 Triosephosphate isomerase C4901_04545 PF03840 Preprotein translocase SecG subunit C4901_04555 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 C4901_04560 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4901_04565 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C4901_04570 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C4901_04575 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin C4901_04580 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C4901_04580 PF10531 SLBB domain C4901_04580 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C4901_04585 PF00384 Molybdopterin oxidoreductase C4901_04585 PF01568 Molydopterin dinucleotide binding domain C4901_04585 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C4901_04585 PF13510 2Fe-2S iron-sulfur cluster binding domain C4901_04590 PF00146 NADH dehydrogenase C4901_04595 PF12838 4Fe-4S dicluster domain C4901_04600 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 C4901_04605 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L C4901_04610 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_04610 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4901_04615 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_04620 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_04625 PF01322 Cytochrome C' C4901_04630 PF01292 Prokaryotic cytochrome b561 C4901_04635 PF00593 TonB dependent receptor C4901_04635 PF07715 TonB-dependent Receptor Plug Domain C4901_04645 PF03372 Endonuclease/Exonuclease/phosphatase family C4901_04655 PF02576 Uncharacterised BCR, YhbC family COG0779 C4901_04655 PF17384 C4901_04655 C4901_04660 PF00575 S1 RNA binding domain C4901_04660 PF08529 NusA N-terminal domain C4901_04660 PF13184 NusA-like KH domain C4901_04660 PF14520 Helix-hairpin-helix domain C4901_04665 PF00009 Elongation factor Tu GTP binding domain C4901_04665 PF03144 Elongation factor Tu domain 2 C4901_04665 PF04760 Translation initiation factor IF-2, N-terminal region C4901_04665 PF08364 C4901_04665 C4901_04665 PF11987 Translation-initiation factor 2 C4901_04670 PF02033 Ribosome-binding factor A C4901_04675 PF01509 TruB family pseudouridylate synthase (N terminal domain) C4901_04675 PF09157 Pseudouridine synthase II TruB, C-terminal C4901_04675 PF16198 C4901_04675 C4901_04680 PF00312 Ribosomal protein S15 C4901_04685 PF00013 KH domain C4901_04685 PF00575 S1 RNA binding domain C4901_04685 PF01138 3' exoribonuclease family, domain 1 C4901_04685 PF03725 3' exoribonuclease family, domain 2 C4901_04685 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C4901_04690 PF13649 Methyltransferase domain C4901_04695 PF02635 DsrE/DsrF-like family C4901_04700 PF12697 Alpha/beta hydrolase family C4901_04705 PF00501 AMP-binding enzyme C4901_04705 PF13193 AMP-binding enzyme C-terminal domain C4901_04705 PF16177 C4901_04705 C4901_04710 PF09335 C4901_04710 C4901_04715 PF01258 Prokaryotic dksA/traR C4-type zinc finger C4901_04720 PF13419 Haloacid dehalogenase-like hydrolase C4901_04725 PF01242 6-pyruvoyl tetrahydropterin synthase C4901_04730 PF13419 Haloacid dehalogenase-like hydrolase C4901_04735 PF13489 Methyltransferase domain C4901_04740 PF01979 Amidohydrolase family C4901_04750 PF01008 Initiation factor 2 subunit family C4901_04755 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4901_04755 PF06481 COX Aromatic Rich Motif C4901_04760 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4901_04765 PF00510 Cytochrome c oxidase subunit III C4901_04775 PF13173 AAA domain C4901_04775 PF13635 C4901_04775 C4901_04780 PF01019 Gamma-glutamyltranspeptidase C4901_04785 PF01925 C4901_04785 C4901_04790 PF13649 Methyltransferase domain C4901_04795 PF00723 Glycosyl hydrolases family 15 C4901_04800 PF02411 C4901_04800 C4901_04805 PF00403 Heavy-metal-associated domain C4901_04810 PF13435 Cytochrome c554 and c-prime C4901_04825 PF00892 EamA-like transporter family C4901_04835 PF00581 Rhodanese-like domain C4901_04845 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein C4901_04850 PF00512 His Kinase A (phospho-acceptor) domain C4901_04850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_04855 PF00072 Response regulator receiver domain C4901_04855 PF00158 Sigma-54 interaction domain C4901_04855 PF02954 Bacterial regulatory protein, Fis family C4901_04860 PF00563 EAL domain C4901_04860 PF00990 GGDEF domain C4901_04860 PF13185 GAF domain C4901_04860 PF13426 PAS domain C4901_04870 PF00589 Phage integrase family C4901_04875 PF14076 C4901_04875 C4901_04880 PF10049 C4901_04880 C4901_04890 PF13546 C4901_04890 C4901_04895 PF00589 Phage integrase family C4901_04910 PF15731 C4901_04910 C4901_04915 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C4901_04915 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C4901_04920 PF05116 Sucrose-6F-phosphate phosphohydrolase C4901_04925 PF00982 Glycosyltransferase family 20 C4901_04935 PF00107 Zinc-binding dehydrogenase C4901_04935 PF08240 Alcohol dehydrogenase GroES-like domain C4901_04950 PF11356 Type IV pilus biogenesis C4901_04950 PF13180 PDZ domain C4901_04955 PF00263 C4901_04955 C4901_04955 PF03958 Bacterial type II/III secretion system short domain C4901_04960 PF00437 Type II/IV secretion system protein C4901_04965 PF00482 Type II secretion system (T2SS), protein F C4901_04970 PF07963 Prokaryotic N-terminal methylation motif C4901_04970 PF08334 Type II secretion system (T2SS), protein G C4901_04975 PF07963 Prokaryotic N-terminal methylation motif C4901_04975 PF12019 Type II transport protein GspH C4901_04980 PF02501 Type II secretion system (T2SS), protein I C4901_04980 PF07963 Prokaryotic N-terminal methylation motif C4901_04985 PF07963 Prokaryotic N-terminal methylation motif C4901_04985 PF11612 Type II secretion system (T2SS), protein J C4901_04990 PF03934 Type II secretion system (T2SS), protein K C4901_04995 PF05134 Type II secretion system (T2SS), protein L C4901_04995 PF12693 GspL periplasmic domain C4901_05000 PF04612 Type II secretion system (T2SS), protein M C4901_05005 PF01203 C4901_05005 C4901_05010 PF11127 Protein of unknown function (DUF2892) C4901_05015 PF04542 Sigma-70 region 2 C4901_05015 PF08281 Sigma-70, region 4 C4901_05020 PF01548 C4901_05020 C4901_05020 PF02371 C4901_05020 C4901_05025 PF01593 Flavin containing amine oxidoreductase C4901_05030 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_05035 PF01850 PIN domain C4901_05040 PF09957 C4901_05040 C4901_05045 PF01385 C4901_05045 C4901_05050 PF12323 C4901_05050 C4901_05060 PF00482 Type II secretion system (T2SS), protein F C4901_05070 PF07963 Prokaryotic N-terminal methylation motif C4901_05075 PF07963 Prokaryotic N-terminal methylation motif C4901_05075 PF16074 C4901_05075 C4901_05095 PF00072 Response regulator receiver domain C4901_05095 PF00158 Sigma-54 interaction domain C4901_05095 PF02954 Bacterial regulatory protein, Fis family C4901_05100 PF00512 His Kinase A (phospho-acceptor) domain C4901_05100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_05115 PF00348 Polyprenyl synthetase C4901_05120 PF00829 Ribosomal prokaryotic L21 protein C4901_05125 PF01016 Ribosomal L27 protein C4901_05130 PF01018 GTP1/OBG C4901_05130 PF01926 50S ribosome-binding GTPase C4901_05135 PF00696 Amino acid kinase family C4901_05135 PF01472 PUA domain C4901_05140 PF01649 Ribosomal protein S20 C4901_05145 PF03023 C4901_05145 C4901_05150 PF09969 C4901_05150 C4901_05155 PF01687 Riboflavin kinase C4901_05155 PF06574 FAD synthetase C4901_05160 PF00133 tRNA synthetases class I (I, L, M and V) C4901_05160 PF08264 Anticodon-binding domain of tRNA C4901_05165 PF01252 C4901_05165 C4901_05170 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4901_05175 PF02401 LytB protein C4901_05180 PF01266 FAD dependent oxidoreductase C4901_05185 PF01475 Ferric uptake regulator family C4901_05200 PF00589 Phage integrase family C4901_05205 PF12952 C4901_05205 C4901_05210 PF13546 C4901_05210 C4901_05220 PF01610 C4901_05220 C4901_05220 PF13542 C4901_05220 C4901_05225 PF07592 C4901_05225 C4901_05230 PF00072 Response regulator receiver domain C4901_05230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_05235 PF08378 C4901_05235 C4901_05235 PF13245 Part of AAA domain C4901_05235 PF13538 UvrD-like helicase C-terminal domain C4901_05245 PF13280 C4901_05245 C4901_05250 PF00004 ATPase family associated with various cellular activities (AAA) C4901_05265 PF03747 ADP-ribosylglycohydrolase C4901_05270 PF00905 Penicillin binding protein transpeptidase domain C4901_05270 PF00912 Transglycosylase C4901_05270 PF17092 C4901_05270 C4901_05280 PF01790 C4901_05280 C4901_05285 PF01145 SPFH domain / Band 7 family C4901_05285 PF16200 C4901_05285 C4901_05290 PF01957 NfeD-like C-terminal, partner-binding C4901_05295 PF00563 EAL domain C4901_05295 PF00990 GGDEF domain C4901_05295 PF13185 GAF domain C4901_05300 PF00440 Bacterial regulatory proteins, tetR family C4901_05310 PF14236 C4901_05310 C4901_05320 PF01548 C4901_05320 C4901_05320 PF02371 C4901_05320 C4901_05325 PF00753 Metallo-beta-lactamase superfamily C4901_05330 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4901_05335 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C4901_05340 PF00255 Glutathione peroxidase C4901_05345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4901_05350 PF01566 C4901_05350 C4901_05355 PF02401 LytB protein C4901_05360 PF04055 Radical SAM superfamily C4901_05360 PF11946 C4901_05360 C4901_05365 PF00535 Glycosyl transferase family 2 C4901_05370 PF05494 Toluene tolerance, Ttg2 C4901_05375 PF04333 C4901_05375 C4901_05380 PF01370 NAD dependent epimerase/dehydratase family C4901_05385 PF13506 Glycosyl transferase family 21 C4901_05390 PF04055 Radical SAM superfamily C4901_05395 PF04794 YdjC-like protein C4901_05400 PF03176 MMPL family C4901_05405 PF03706 C4901_05405 C4901_05410 PF00494 Squalene/phytoene synthase C4901_05415 PF13243 Prenyltransferase-like C4901_05415 PF13249 Prenyltransferase-like C4901_05420 PF01048 Phosphorylase superfamily C4901_05425 PF03706 C4901_05425 C4901_05430 PF00685 Sulfotransferase domain C4901_05440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4901_05445 PF08450 SMP-30/Gluconolaconase/LRE-like region C4901_05455 PF07681 C4901_05455 C4901_05460 PF00732 GMC oxidoreductase C4901_05460 PF05199 GMC oxidoreductase C4901_05465 PF00043 Glutathione S-transferase, C-terminal domain C4901_05465 PF13417 Glutathione S-transferase, N-terminal domain C4901_05470 PF03886 Protein of unknown function (DUF330) C4901_05475 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4901_05475 PF06481 COX Aromatic Rich Motif C4901_05480 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4901_05485 PF00510 Cytochrome c oxidase subunit III C4901_05500 PF02543 Carbamoyltransferase C4901_05500 PF16861 C4901_05500 C4901_05515 PF13229 Right handed beta helix region C4901_05520 PF02798 Glutathione S-transferase, N-terminal domain C4901_05525 PF04365 Protein of unknown function (DUF497) C4901_05530 PF14384 C4901_05530 C4901_05540 PF00155 Aminotransferase class I and II C4901_05545 PF00271 Helicase conserved C-terminal domain C4901_05545 PF02151 UvrB/uvrC motif C4901_05545 PF04851 Type III restriction enzyme, res subunit C4901_05545 PF12344 Ultra-violet resistance protein B C4901_05555 PF13808 C4901_05555 C4901_05555 PF14236 C4901_05555 C4901_05565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4901_05565 PF02824 TGS domain C4901_05565 PF03129 Anticodon binding domain C4901_05565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4901_05570 PF00707 Translation initiation factor IF-3, C-terminal domain C4901_05570 PF05198 Translation initiation factor IF-3, N-terminal domain C4901_05575 PF01632 Ribosomal protein L35 C4901_05580 PF00453 Ribosomal protein L20 C4901_05585 PF01409 tRNA synthetases class II core domain (F) C4901_05585 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C4901_05590 PF01588 Putative tRNA binding domain C4901_05590 PF03147 Ferredoxin-fold anticodon binding domain C4901_05590 PF03483 B3/4 domain C4901_05590 PF03484 tRNA synthetase B5 domain C4901_05595 PF00216 Bacterial DNA-binding protein C4901_05600 PF13411 MerR HTH family regulatory protein C4901_05605 PF00581 Rhodanese-like domain C4901_05610 PF00043 Glutathione S-transferase, C-terminal domain C4901_05610 PF13417 Glutathione S-transferase, N-terminal domain C4901_05620 PF00909 Ammonium Transporter Family C4901_05625 PF16363 C4901_05625 C4901_05630 PF00723 Glycosyl hydrolases family 15 C4901_05630 PF09137 Glucodextranase, domain N C4901_05640 PF00072 Response regulator receiver domain C4901_05640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_05640 PF08447 PAS fold C4901_05640 PF08448 PAS fold C4901_05640 PF13188 PAS domain C4901_05640 PF13596 PAS domain C4901_05645 PF01339 CheB methylesterase C4901_05645 PF01739 CheR methyltransferase, SAM binding domain C4901_05645 PF03705 CheR methyltransferase, all-alpha domain C4901_05650 PF13808 C4901_05650 C4901_05650 PF14236 C4901_05650 C4901_05665 PF01527 Transposase C4901_05670 PF13276 C4901_05670 C4901_05675 PF00665 Integrase core domain C4901_05680 PF13683 C4901_05680 C4901_05690 PF00563 EAL domain C4901_05695 PF16933 C4901_05695 C4901_05710 PF16963 C4901_05710 C4901_05715 PF13036 Protein of unknown function (DUF3897) C4901_05720 PF13429 Tetratricopeptide repeat C4901_05730 PF03537 Glycoside-hydrolase family GH114 C4901_05735 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_05745 PF13505 Outer membrane protein beta-barrel domain C4901_05750 PF01925 C4901_05750 C4901_05755 PF00563 EAL domain C4901_05755 PF00989 PAS fold C4901_05755 PF00990 GGDEF domain C4901_05760 PF00183 Hsp90 protein C4901_05760 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_05765 PF01259 SAICAR synthetase C4901_05775 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4901_05775 PF05697 Bacterial trigger factor protein (TF) C4901_05775 PF05698 Bacterial trigger factor protein (TF) C-terminus C4901_05780 PF00574 Clp protease C4901_05785 PF06689 ClpX C4-type zinc finger C4901_05785 PF07724 AAA domain (Cdc48 subfamily) C4901_05785 PF10431 C-terminal, D2-small domain, of ClpB protein C4901_05790 PF00004 ATPase family associated with various cellular activities (AAA) C4901_05790 PF02190 ATP-dependent protease La (LON) domain C4901_05790 PF05362 Lon protease (S16) C-terminal proteolytic domain C4901_05805 PF02634 FdhD/NarQ family C4901_05815 PF00639 PPIC-type PPIASE domain C4901_05815 PF13624 SurA N-terminal domain C4901_05820 PF13561 Enoyl-(Acyl carrier protein) reductase C4901_05825 PF01464 Transglycosylase SLT domain C4901_05825 PF01476 LysM domain C4901_05830 PF00753 Metallo-beta-lactamase superfamily C4901_05830 PF16123 C4901_05830 C4901_05835 PF08241 Methyltransferase domain C4901_05840 PF00075 RNase H C4901_05845 PF00929 Exonuclease C4901_05850 PF07690 Major Facilitator Superfamily C4901_05855 PF00561 alpha/beta hydrolase fold C4901_05860 PF00563 EAL domain C4901_05860 PF00990 GGDEF domain C4901_05865 PF01903 CbiX C4901_05870 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4901_05875 PF02885 Glycosyl transferase family, helical bundle domain C4901_05880 PF13806 Rieske-like [2Fe-2S] domain C4901_05885 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4901_05885 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4901_05885 PF04324 BFD-like [2Fe-2S] binding domain C4901_05885 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_05890 PF01027 Inhibitor of apoptosis-promoting Bax1 C4901_05900 PF00534 Glycosyl transferases group 1 C4901_05900 PF08323 Starch synthase catalytic domain C4901_05910 PF01738 Dienelactone hydrolase family C4901_05915 PF02685 Glucokinase C4901_05920 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain C4901_05920 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4901_05925 PF00342 Phosphoglucose isomerase C4901_05930 PF00483 Nucleotidyl transferase C4901_05935 PF03065 Glycosyl hydrolase family 57 C4901_05940 PF02446 4-alpha-glucanotransferase C4901_05955 PF01757 C4901_05955 C4901_05965 PF13767 C4901_05965 C4901_05970 PF00072 Response regulator receiver domain C4901_05970 PF00158 Sigma-54 interaction domain C4901_05970 PF02954 Bacterial regulatory protein, Fis family C4901_05975 PF00343 Carbohydrate phosphorylase C4901_05975 PF11897 C4901_05975 C4901_05980 PF00128 Alpha amylase, catalytic domain C4901_05980 PF02806 Alpha amylase, C-terminal all-beta domain C4901_05980 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4901_06000 PF01757 C4901_06000 C4901_06005 PF13767 C4901_06005 C4901_06010 PF00072 Response regulator receiver domain C4901_06010 PF00158 Sigma-54 interaction domain C4901_06015 PF00158 Sigma-54 interaction domain C4901_06015 PF02954 Bacterial regulatory protein, Fis family C4901_06035 PF00128 Alpha amylase, catalytic domain C4901_06035 PF02806 Alpha amylase, C-terminal all-beta domain C4901_06035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4901_06040 PF11896 Domain of unknown function (DUF3416) C4901_06045 PF00128 Alpha amylase, catalytic domain C4901_06045 PF16657 C4901_06045 C4901_06055 PF00128 Alpha amylase, catalytic domain C4901_06055 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4901_06060 PF00128 Alpha amylase, catalytic domain C4901_06060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C4901_06060 PF11941 Domain of unknown function (DUF3459) C4901_06065 PF00128 Alpha amylase, catalytic domain C4901_06070 PF01243 Pyridoxamine 5'-phosphate oxidase C4901_06080 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_06090 PF01053 Cys/Met metabolism PLP-dependent enzyme C4901_06095 PF00266 Aminotransferase class-V C4901_06105 PF11231 C4901_06105 C4901_06120 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4901_06125 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4901_06130 PF00510 Cytochrome c oxidase subunit III C4901_06145 PF01040 UbiA prenyltransferase family C4901_06155 PF01011 PQQ enzyme repeat C4901_06155 PF13360 PQQ-like domain C4901_06165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C4901_06165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C4901_06170 PF02705 C4901_06170 C4901_06175 PF14236 C4901_06175 C4901_06185 PF00654 Voltage gated chloride channel C4901_06190 PF00391 PEP-utilising enzyme, mobile domain C4901_06190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C4901_06190 PF02896 PEP-utilising enzyme, TIM barrel domain C4901_06200 PF07295 C4901_06200 C4901_06205 PF03781 Sulfatase-modifying factor enzyme 1 C4901_06205 PF12867 DinB superfamily C4901_06205 PF13489 Methyltransferase domain C4901_06210 PF14236 C4901_06210 C4901_06215 PF05818 C4901_06215 C4901_06220 PF00316 Fructose-1-6-bisphosphatase C4901_06225 PF00072 Response regulator receiver domain C4901_06225 PF00196 Bacterial regulatory proteins, luxR family C4901_06230 PF00512 His Kinase A (phospho-acceptor) domain C4901_06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_06235 PF03069 Acetamidase/Formamidase family C4901_06240 PF09723 C4901_06240 C4901_06250 PF01695 IstB-like ATP binding protein C4901_06275 PF01471 Putative peptidoglycan binding domain C4901_06280 PF07690 Major Facilitator Superfamily C4901_06290 PF14236 C4901_06290 C4901_06295 PF00990 GGDEF domain C4901_06305 PF05067 Manganese containing catalase C4901_06310 PF01566 C4901_06310 C4901_06315 PF13649 Methyltransferase domain C4901_06325 PF14236 C4901_06325 C4901_06330 PF03050 C4901_06330 C4901_06335 PF00593 TonB dependent receptor C4901_06335 PF07715 TonB-dependent Receptor Plug Domain C4901_06345 PF00593 TonB dependent receptor C4901_06345 PF07715 TonB-dependent Receptor Plug Domain C4901_06350 PF00881 Nitroreductase family C4901_06365 PF01638 HxlR-like helix-turn-helix C4901_06385 PF14559 Tetratricopeptide repeat C4901_06390 PF13470 C4901_06390 C4901_06400 PF00107 Zinc-binding dehydrogenase C4901_06400 PF08240 Alcohol dehydrogenase GroES-like domain C4901_06400 PF13823 Alcohol dehydrogenase GroES-associated C4901_06405 PF07929 Plasmid pRiA4b ORF-3-like protein C4901_06410 PF00069 Protein kinase domain C4901_06410 PF13672 Protein phosphatase 2C C4901_06415 PF00324 Amino acid permease C4901_06420 PF01645 Conserved region in glutamate synthase C4901_06425 PF01493 GXGXG motif C4901_06430 PF13522 Glutamine amidotransferase domain C4901_06435 PF00120 Glutamine synthetase, catalytic domain C4901_06445 PF01571 Aminomethyltransferase folate-binding domain C4901_06445 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_06445 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4901_06445 PF13510 2Fe-2S iron-sulfur cluster binding domain C4901_06450 PF04267 Sarcosine oxidase, delta subunit family C4901_06455 PF01266 FAD dependent oxidoreductase C4901_06460 PF01381 Helix-turn-helix C4901_06460 PF07883 Cupin domain C4901_06465 PF02661 Fic/DOC family C4901_06470 PF08843 Nucleotidyl transferase of unknown function (DUF1814) C4901_06475 PF08843 Nucleotidyl transferase of unknown function (DUF1814) C4901_06480 PF02661 Fic/DOC family C4901_06490 PF08843 Nucleotidyl transferase of unknown function (DUF1814) C4901_06500 PF02661 Fic/DOC family C4901_06510 PF01609 Transposase DDE domain C4901_06535 PF03693 Uncharacterised protein family (UPF0156) C4901_06540 PF05016 Plasmid stabilisation system protein C4901_06555 PF08843 Nucleotidyl transferase of unknown function (DUF1814) C4901_06565 PF00535 Glycosyl transferase family 2 C4901_06570 PF00535 Glycosyl transferase family 2 C4901_06570 PF13489 Methyltransferase domain C4901_06570 PF13641 Glycosyltransferase like family 2 C4901_06575 PF07804 HipA-like C-terminal domain C4901_06580 PF13657 HipA N-terminal domain C4901_06585 PF13657 HipA N-terminal domain C4901_06600 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_06615 PF01610 C4901_06615 C4901_06620 PF01610 C4901_06620 C4901_06625 PF01610 C4901_06625 C4901_06630 PF01610 C4901_06630 C4901_06635 PF13542 C4901_06635 C4901_06640 PF01850 PIN domain C4901_06660 PF00005 ABC transporter C4901_06665 PF01061 C4901_06665 C4901_06675 PF00534 Glycosyl transferases group 1 C4901_06675 PF13439 Glycosyltransferase Family 4 C4901_06680 PF00534 Glycosyl transferases group 1 C4901_06680 PF13439 Glycosyltransferase Family 4 C4901_06685 PF00534 Glycosyl transferases group 1 C4901_06685 PF13439 Glycosyltransferase Family 4 C4901_06690 PF16363 C4901_06690 C4901_06695 PF16363 C4901_06695 C4901_06700 PF08241 Methyltransferase domain C4901_06705 PF00534 Glycosyl transferases group 1 C4901_06715 PF00293 NUDIX domain C4901_06720 PF01609 Transposase DDE domain C4901_06720 PF02281 Transposase Tn5 dimerisation domain C4901_06720 PF14706 Transposase DNA-binding C4901_06725 PF14236 C4901_06725 C4901_06735 PF05717 C4901_06735 C4901_06740 PF14236 C4901_06740 C4901_06745 PF03050 C4901_06745 C4901_06750 PF03050 C4901_06750 C4901_06755 PF14236 C4901_06755 C4901_06765 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4901_06765 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4901_06770 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4901_06770 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4901_06775 PF02635 DsrE/DsrF-like family C4901_06780 PF02635 DsrE/DsrF-like family C4901_06785 PF04077 DsrH like protein C4901_06790 PF04358 DsrC like protein C4901_06795 PF02665 Nitrate reductase gamma subunit C4901_06800 PF13183 4Fe-4S dicluster domain C4901_06805 PF00037 4Fe-4S binding domain C4901_06805 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_06805 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4901_06815 PF13247 4Fe-4S dicluster domain C4901_06820 PF03916 C4901_06820 C4901_06825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4901_06825 PF07685 CobB/CobQ-like glutamine amidotransferase domain C4901_06830 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4901_06830 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_06835 PF07730 Histidine kinase C4901_06835 PF13185 GAF domain C4901_06840 PF00072 Response regulator receiver domain C4901_06840 PF00196 Bacterial regulatory proteins, luxR family C4901_06845 PF00149 Calcineurin-like phosphoesterase C4901_06855 PF02661 Fic/DOC family C4901_06860 PF05016 Plasmid stabilisation system protein C4901_06865 PF01402 Ribbon-helix-helix protein, copG family C4901_06870 PF01610 C4901_06870 C4901_06895 PF08681 Protein of unknown function (DUF1778) C4901_06900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C4901_06900 PF10414 Sirohaem synthase dimerisation region C4901_06900 PF13241 Putative NAD(P)-binding C4901_06900 PF14824 Sirohaem biosynthesis protein central C4901_06905 PF02195 ParB-like nuclease domain C4901_06910 PF04002 RadC-like JAB domain C4901_06915 PF09407 Protein of unknown function (DUF2005) C4901_06925 PF13671 AAA domain C4901_06940 PF09983 C4901_06940 C4901_06940 PF11795 C4901_06940 C4901_06945 PF13555 P-loop containing region of AAA domain C4901_06945 PF13558 Putative exonuclease SbcCD, C subunit C4901_06950 PF13835 C4901_06950 C4901_06955 PF11855 C4901_06955 C4901_06960 PF12276 C4901_06960 C4901_06965 PF05656 C4901_06965 C4901_06970 PF00072 Response regulator receiver domain C4901_06970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_06970 PF03924 CHASE domain C4901_06970 PF08448 PAS fold C4901_06975 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4901_06980 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4901_06985 PF13302 Acetyltransferase (GNAT) domain C4901_06990 PF00072 Response regulator receiver domain C4901_06990 PF00989 PAS fold C4901_06990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_06990 PF08448 PAS fold C4901_06990 PF13426 PAS domain C4901_06995 PF01844 HNH endonuclease C4901_07000 PF00313 'Cold-shock' DNA-binding domain C4901_07005 PF13632 Glycosyl transferase family group 2 C4901_07010 PF04349 Periplasmic glucan biosynthesis protein, MdoG C4901_07015 PF13505 Outer membrane protein beta-barrel domain C4901_07020 PF13649 Methyltransferase domain C4901_07030 PF00270 DEAD/DEAH box helicase C4901_07030 PF00271 Helicase conserved C-terminal domain C4901_07040 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C4901_07040 PF08388 C4901_07040 C4901_07045 PF00990 GGDEF domain C4901_07045 PF17158 C4901_07045 C4901_07050 PF10861 C4901_07050 C4901_07055 PF02673 C4901_07055 C4901_07060 PF00890 FAD binding domain C4901_07060 PF02910 Fumarate reductase flavoprotein C-term C4901_07065 PF04542 Sigma-70 region 2 C4901_07065 PF08281 Sigma-70, region 4 C4901_07070 PF03872 Anti sigma-E protein RseA, N-terminal domain C4901_07075 PF03888 MucB/RseB family C4901_07075 PF17188 C4901_07075 C4901_07080 PF00595 PDZ domain (Also known as DHR or GLGF) C4901_07080 PF13180 PDZ domain C4901_07080 PF13365 Trypsin-like peptidase domain C4901_07085 PF00009 Elongation factor Tu GTP binding domain C4901_07085 PF00679 Elongation factor G C-terminus C4901_07085 PF03144 Elongation factor Tu domain 2 C4901_07085 PF06421 GTP-binding protein LepA C-terminus C4901_07090 PF00717 Peptidase S24-like C4901_07090 PF10502 Signal peptidase, peptidase S26 C4901_07095 PF16137 C4901_07095 C4901_07100 PF00035 Double-stranded RNA binding motif C4901_07100 PF14622 Ribonuclease-III-like C4901_07105 PF01926 50S ribosome-binding GTPase C4901_07105 PF07650 KH domain C4901_07110 PF02565 Recombination protein O C terminal C4901_07110 PF11967 Recombination protein O N terminal C4901_07115 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ C4901_07125 PF05016 Plasmid stabilisation system protein C4901_07130 PF03693 Uncharacterised protein family (UPF0156) C4901_07135 PF01648 4'-phosphopantetheinyl transferase superfamily C4901_07150 PF04362 Bacterial Fe(2+) trafficking C4901_07155 PF01521 Iron-sulphur cluster biosynthesis C4901_07160 PF13535 ATP-grasp domain C4901_07165 PF01594 C4901_07165 C4901_07185 PF13538 UvrD-like helicase C-terminal domain C4901_07185 PF13604 AAA domain C4901_07200 PF16561 C4901_07200 C4901_07205 PF04542 Sigma-70 region 2 C4901_07205 PF08281 Sigma-70, region 4 C4901_07210 PF16561 C4901_07210 C4901_07220 PF00005 ABC transporter C4901_07220 PF12848 ABC transporter C4901_07220 PF16326 C4901_07220 C4901_07225 PF00043 Glutathione S-transferase, C-terminal domain C4901_07225 PF02798 Glutathione S-transferase, N-terminal domain C4901_07230 PF03733 C4901_07230 C4901_07235 PF09084 NMT1/THI5 like C4901_07240 PF00528 Binding-protein-dependent transport system inner membrane component C4901_07245 PF00005 ABC transporter C4901_07250 PF09347 Domain of unknown function (DUF1989) C4901_07255 PF09347 Domain of unknown function (DUF1989) C4901_07260 PF02626 Allophanate hydrolase subunit 2 C4901_07260 PF02682 Allophanate hydrolase subunit 1 C4901_07260 PF02785 Biotin carboxylase C-terminal domain C4901_07260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4901_07265 PF00999 Sodium/hydrogen exchanger family C4901_07270 PF00723 Glycosyl hydrolases family 15 C4901_07270 PF09137 Glucodextranase, domain N C4901_07280 PF00589 Phage integrase family C4901_07285 PF10412 Type IV secretion-system coupling protein DNA-binding domain C4901_07290 PF10412 Type IV secretion-system coupling protein DNA-binding domain C4901_07315 PF13604 AAA domain C4901_07320 PF08751 TrwC relaxase C4901_07325 PF08751 TrwC relaxase C4901_07360 PF15723 C4901_07360 C4901_07385 PF00589 Phage integrase family C4901_07395 PF01609 Transposase DDE domain C4901_07405 PF08327 Activator of Hsp90 ATPase homolog 1-like protein C4901_07410 PF00959 Phage lysozyme C4901_07415 PF03814 C4901_07415 C4901_07420 PF05425 C4901_07420 C4901_07425 PF04234 CopC domain C4901_07435 PF14235 C4901_07435 C4901_07440 PF02321 Outer membrane efflux protein C4901_07445 PF00005 ABC transporter C4901_07445 PF00664 ABC transporter transmembrane region C4901_07445 PF03412 Peptidase C39 family C4901_07450 PF13437 HlyD family secretion protein C4901_07455 PF10439 C4901_07455 C4901_07460 PF03050 C4901_07460 C4901_07465 PF01695 IstB-like ATP binding protein C4901_07470 PF00893 Small Multidrug Resistance protein C4901_07480 PF01381 Helix-turn-helix C4901_07485 PF05015 Plasmid maintenance system killer protein C4901_07490 PF00665 Integrase core domain C4901_07495 PF01610 C4901_07495 C4901_07505 PF01610 C4901_07505 C4901_07510 PF07592 C4901_07510 C4901_07520 PF07592 C4901_07520 C4901_07525 PF01609 Transposase DDE domain C4901_07530 PF00535 Glycosyl transferase family 2 C4901_07535 PF00391 PEP-utilising enzyme, mobile domain C4901_07535 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C4901_07540 PF00005 ABC transporter C4901_07545 PF06182 C4901_07545 C4901_07550 PF06182 C4901_07550 C4901_07555 PF01139 tRNA-splicing ligase RtcB C4901_07565 PF01610 C4901_07565 C4901_07570 PF01610 C4901_07570 C4901_07580 PF14236 C4901_07580 C4901_07590 PF13744 Helix-turn-helix domain C4901_07595 PF05973 C4901_07595 C4901_07600 PF01396 C4901_07600 C4901_07620 PF00890 FAD binding domain C4901_07620 PF02910 Fumarate reductase flavoprotein C-term C4901_07625 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit C4901_07625 PF13187 4Fe-4S dicluster domain C4901_07650 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4901_07655 PF12705 PD-(D/E)XK nuclease superfamily C4901_07660 PF00580 UvrD/REP helicase N-terminal domain C4901_07660 PF12705 PD-(D/E)XK nuclease superfamily C4901_07660 PF13361 UvrD-like helicase C-terminal domain C4901_07675 PF13808 C4901_07675 C4901_07675 PF14236 C4901_07675 C4901_07685 PF13231 C4901_07685 C4901_07690 PF00440 Bacterial regulatory proteins, tetR family C4901_07695 PF02678 Pirin C4901_07700 PF03358 NADPH-dependent FMN reductase C4901_07705 PF01638 HxlR-like helix-turn-helix C4901_07710 PF02646 C4901_07710 C4901_07715 PF00005 ABC transporter C4901_07715 PF12848 ABC transporter C4901_07720 PF01522 Polysaccharide deacetylase C4901_07730 PF06629 C4901_07730 C4901_07735 PF00550 Phosphopantetheine attachment site C4901_07740 PF03279 C4901_07740 C4901_07750 PF03176 MMPL family C4901_07755 PF00109 Beta-ketoacyl synthase, N-terminal domain C4901_07755 PF02801 Beta-ketoacyl synthase, C-terminal domain C4901_07760 PF13723 C4901_07760 C4901_07770 PF00107 Zinc-binding dehydrogenase C4901_07770 PF08240 Alcohol dehydrogenase GroES-like domain C4901_07775 PF00196 Bacterial regulatory proteins, luxR family C4901_07775 PF03472 Autoinducer binding domain C4901_07780 PF00765 Autoinducer synthetase C4901_07785 PF07883 Cupin domain C4901_07795 PF00111 2Fe-2S iron-sulfur cluster binding domain C4901_07795 PF00175 Oxidoreductase NAD-binding domain C4901_07795 PF00970 Oxidoreductase FAD-binding domain C4901_07800 PF01152 Bacterial-like globin C4901_07805 PF02082 Transcriptional regulator C4901_07815 PF01425 Amidase C4901_07830 PF01583 Adenylylsulphate kinase C4901_07835 PF01565 FAD binding domain C4901_07835 PF02754 C4901_07835 C4901_07835 PF02913 FAD linked oxidases, C-terminal domain C4901_07835 PF11880 C4901_07835 C4901_07835 PF12447 C4901_07835 C4901_07835 PF13183 4Fe-4S dicluster domain C4901_07840 PF13180 PDZ domain C4901_07840 PF13365 Trypsin-like peptidase domain C4901_07845 PF04286 C4901_07845 C4901_07850 PF00563 EAL domain C4901_07850 PF00990 GGDEF domain C4901_07850 PF08448 PAS fold C4901_07855 PF01810 C4901_07855 C4901_07860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_07860 PF03466 LysR substrate binding domain C4901_07865 PF01510 N-acetylmuramoyl-L-alanine amidase C4901_07870 PF03186 C4901_07870 C4901_07875 PF12710 haloacid dehalogenase-like hydrolase C4901_07880 PF00293 NUDIX domain C4901_07895 PF00873 AcrB/AcrD/AcrF family C4901_07900 PF00873 AcrB/AcrD/AcrF family C4901_07905 PF16576 C4901_07905 C4901_07910 PF02321 Outer membrane efflux protein C4901_07915 PF00122 E1-E2 ATPase C4901_07915 PF00690 Cation transporter/ATPase, N-terminus C4901_07915 PF00702 haloacid dehalogenase-like hydrolase C4901_07920 PF00582 Universal stress protein family C4901_07925 PF13501 Sulfur oxidation protein SoxY C4901_07930 PF08770 Sulphur oxidation protein SoxZ C4901_07935 PF00563 EAL domain C4901_07935 PF00990 GGDEF domain C4901_07940 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4901_07940 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4901_07945 PF14489 QueF-like protein C4901_07950 PF02463 RecF/RecN/SMC N terminal domain C4901_07955 PF04354 ZipA, C-terminal FtsZ-binding domain C4901_07960 PF00533 BRCA1 C Terminus (BRCT) domain C4901_07960 PF01653 NAD-dependent DNA ligase adenylation domain C4901_07960 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C4901_07960 PF03120 NAD-dependent DNA ligase OB-fold domain C4901_07960 PF12826 Helix-hairpin-helix motif C4901_07960 PF14520 Helix-hairpin-helix domain C4901_07965 PF13616 PPIC-type PPIASE domain C4901_07965 PF13624 SurA N-terminal domain C4901_07970 PF01722 BolA-like protein C4901_07975 PF03795 YCII-related domain C4901_07985 PF02811 PHP domain C4901_07990 PF01300 Telomere recombination C4901_08000 PF00579 tRNA synthetases class I (W and Y) C4901_08005 PF02616 ScpA/B protein C4901_08015 PF00849 RNA pseudouridylate synthase C4901_08015 PF01479 S4 domain C4901_08020 PF00730 HhH-GPD superfamily base excision DNA repair protein C4901_08025 PF04333 C4901_08025 C4901_08030 PF00886 Ribosomal protein S16 C4901_08035 PF01782 RimM N-terminal domain C4901_08035 PF05239 PRC-barrel domain C4901_08040 PF01746 tRNA (Guanine-1)-methyltransferase C4901_08045 PF01245 Ribosomal protein L19 C4901_08050 PF00589 Phage integrase family C4901_08050 PF02899 Phage integrase, N-terminal SAM-like domain C4901_08060 PF01734 Patatin-like phospholipase C4901_08065 PF00563 EAL domain C4901_08065 PF00990 GGDEF domain C4901_08070 PF01292 Prokaryotic cytochrome b561 C4901_08075 PF00580 UvrD/REP helicase N-terminal domain C4901_08075 PF13361 UvrD-like helicase C-terminal domain C4901_08080 PF00982 Glycosyltransferase family 20 C4901_08085 PF00924 Mechanosensitive ion channel C4901_08090 PF02358 Trehalose-phosphatase C4901_08095 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family C4901_08100 PF00285 Citrate synthase C4901_08105 PF00793 DAHP synthetase I family C4901_08110 PF00313 'Cold-shock' DNA-binding domain C4901_08115 PF09335 C4901_08115 C4901_08120 PF15937 C4901_08120 C4901_08130 PF01609 Transposase DDE domain C4901_08130 PF02281 Transposase Tn5 dimerisation domain C4901_08135 PF14706 Transposase DNA-binding C4901_08140 PF14236 C4901_08140 C4901_08145 PF01385 C4901_08145 C4901_08145 PF07282 C4901_08145 C4901_08145 PF12323 C4901_08145 C4901_08155 PF01189 NOL1/NOP2/sun family C4901_08160 PF00795 Carbon-nitrogen hydrolase C4901_08165 PF04371 Porphyromonas-type peptidyl-arginine deiminase C4901_08170 PF02230 Phospholipase/Carboxylesterase C4901_08180 PF13808 C4901_08180 C4901_08180 PF14236 C4901_08180 C4901_08185 PF02599 Global regulator protein family C4901_08190 PF06245 C4901_08190 C4901_08195 PF12112 Protein of unknown function (DUF3579) C4901_08200 PF01180 Dihydroorotate dehydrogenase C4901_08205 PF00849 RNA pseudouridylate synthase C4901_08205 PF01479 S4 domain C4901_08210 PF00920 Dehydratase family C4901_08215 PF09360 Iron-binding zinc finger CDGSH type C4901_08220 PF03372 Endonuclease/Exonuclease/phosphatase family C4901_08225 PF00614 Phospholipase D Active site motif C4901_08225 PF09335 C4901_08225 C4901_08225 PF13091 PLD-like domain C4901_08235 PF13591 MerR HTH family regulatory protein C4901_08245 PF00206 Lyase C4901_08245 PF08328 Adenylosuccinate lyase C-terminal C4901_08250 PF03167 Uracil DNA glycosylase superfamily C4901_08255 PF03054 tRNA methyl transferase C4901_08260 PF00293 NUDIX domain C4901_08265 PF00849 RNA pseudouridylate synthase C4901_08270 PF00180 Isocitrate/isopropylmalate dehydrogenase C4901_08275 PF02321 Outer membrane efflux protein C4901_08280 PF16576 C4901_08280 C4901_08285 PF00873 AcrB/AcrD/AcrF family C4901_08290 PF00313 'Cold-shock' DNA-binding domain C4901_08295 PF02617 ATP-dependent Clp protease adaptor protein ClpS C4901_08300 PF00004 ATPase family associated with various cellular activities (AAA) C4901_08300 PF02861 Clp amino terminal domain C4901_08300 PF07724 AAA domain (Cdc48 subfamily) C4901_08300 PF10431 C-terminal, D2-small domain, of ClpB protein C4901_08310 PF01176 Translation initiation factor 1A / IF-1 C4901_08315 PF04376 C4901_08315 C4901_08315 PF04377 C4901_08315 C4901_08320 PF03588 Leucyl/phenylalanyl-tRNA protein transferase C4901_08325 PF04339 C4901_08325 C4901_08330 PF02321 Outer membrane efflux protein C4901_08335 PF13533 Biotin-lipoyl like C4901_08340 PF00549 CoA-ligase C4901_08340 PF08442 ATP-grasp domain C4901_08345 PF02629 CoA binding domain C4901_08350 PF00549 CoA-ligase C4901_08355 PF00795 Carbon-nitrogen hydrolase C4901_08355 PF02540 NAD synthase C4901_08360 PF13525 Outer membrane lipoprotein C4901_08365 PF00849 RNA pseudouridylate synthase C4901_08370 PF02578 Multi-copper polyphenol oxidoreductase laccase C4901_08375 PF01965 DJ-1/PfpI family C4901_08380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C4901_08380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C4901_08385 PF03781 Sulfatase-modifying factor enzyme 1 C4901_08385 PF12867 DinB superfamily C4901_08390 PF13230 Glutamine amidotransferases class-II C4901_08395 PF10017 C4901_08395 C4901_08400 PF03625 Domain of unknown function DUF302 C4901_08405 PF01914 C4901_08405 C4901_08410 PF00004 ATPase family associated with various cellular activities (AAA) C4901_08410 PF02861 Clp amino terminal domain C4901_08410 PF07724 AAA domain (Cdc48 subfamily) C4901_08410 PF10431 C-terminal, D2-small domain, of ClpB protein C4901_08415 PF03061 Thioesterase superfamily C4901_08425 PF01264 Chorismate synthase C4901_08430 PF12832 MFS_1 like family C4901_08440 PF00330 Aconitase family (aconitate hydratase) C4901_08445 PF00694 Aconitase C-terminal domain C4901_08450 PF00180 Isocitrate/isopropylmalate dehydrogenase C4901_08455 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4901_08455 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4901_08465 PF00186 Dihydrofolate reductase C4901_08470 PF00303 Thymidylate synthase C4901_08475 PF00856 SET domain C4901_08485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C4901_08485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C4901_08505 PF00589 Phage integrase family C4901_08510 PF14076 C4901_08510 C4901_08540 PF00891 O-methyltransferase C4901_08540 PF16864 C4901_08540 C4901_08545 PF01131 DNA topoisomerase C4901_08550 PF01695 IstB-like ATP binding protein C4901_08555 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_08560 PF01850 PIN domain C4901_08575 PF00905 Penicillin binding protein transpeptidase domain C4901_08575 PF03717 Penicillin-binding Protein dimerisation domain C4901_08585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_08585 PF03466 LysR substrate binding domain C4901_08590 PF02627 Carboxymuconolactone decarboxylase family C4901_08595 PF00563 EAL domain C4901_08595 PF00990 GGDEF domain C4901_08600 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4901_08605 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit C4901_08605 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit C4901_08610 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_08620 PF00146 NADH dehydrogenase C4901_08625 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_08630 PF11740 C4901_08630 C4901_08635 PF04982 C4901_08635 C4901_08640 PF14236 C4901_08640 C4901_08665 PF01145 SPFH domain / Band 7 family C4901_08665 PF12221 C4901_08665 C4901_08670 PF01145 SPFH domain / Band 7 family C4901_08675 PF13393 Histidyl-tRNA synthetase C4901_08680 PF00709 Adenylosuccinate synthetase C4901_08690 PF00575 S1 RNA binding domain C4901_08690 PF00773 RNB domain C4901_08690 PF08206 Ribonuclease B OB domain C4901_08695 PF00588 SpoU rRNA Methylase family C4901_08695 PF08032 RNA 2'-O ribose methyltransferase substrate binding C4901_08700 PF01250 Ribosomal protein S6 C4901_08705 PF01084 Ribosomal protein S18 C4901_08710 PF01281 Ribosomal protein L9, N-terminal domain C4901_08710 PF03948 Ribosomal protein L9, C-terminal domain C4901_08715 PF00772 DnaB-like helicase N terminal domain C4901_08715 PF03796 DnaB-like helicase C terminal domain C4901_08720 PF00842 Alanine racemase, C-terminal domain C4901_08720 PF01168 Alanine racemase, N-terminal domain C4901_08725 PF13481 AAA domain C4901_08725 PF13541 Subunit ChlI of Mg-chelatase C4901_08730 PF00563 EAL domain C4901_08730 PF00990 GGDEF domain C4901_08735 PF00528 Binding-protein-dependent transport system inner membrane component C4901_08740 PF00528 Binding-protein-dependent transport system inner membrane component C4901_08745 PF12849 PBP superfamily domain C4901_08750 PF00106 short chain dehydrogenase C4901_08760 PF03601 C4901_08760 C4901_08765 PF01226 Formate/nitrite transporter C4901_08770 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C4901_08770 PF13378 Enolase C-terminal domain-like C4901_08775 PF00205 Thiamine pyrophosphate enzyme, central domain C4901_08775 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4901_08775 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4901_08780 PF07100 Anabaena sensory rhodopsin transducer C4901_08785 PF00155 Aminotransferase class I and II C4901_08790 PF02545 Maf-like protein C4901_08795 PF00364 Biotin-requiring enzyme C4901_08795 PF00682 HMGL-like C4901_08795 PF02436 Conserved carboxylase domain C4901_08800 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain C4901_08800 PF02785 Biotin carboxylase C-terminal domain C4901_08800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C4901_08805 PF00239 Resolvase, N terminal domain C4901_08805 PF13411 MerR HTH family regulatory protein C4901_08810 PF02620 C4901_08810 C4901_08815 PF01783 Ribosomal L32p protein family C4901_08820 PF02504 Fatty acid synthesis protein C4901_08825 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C4901_08825 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C4901_08830 PF00698 Acyl transferase domain C4901_08835 PF13561 Enoyl-(Acyl carrier protein) reductase C4901_08840 PF00550 Phosphopantetheine attachment site C4901_08845 PF00109 Beta-ketoacyl synthase, N-terminal domain C4901_08845 PF02801 Beta-ketoacyl synthase, C-terminal domain C4901_08850 PF00425 chorismate binding enzyme C4901_08855 PF01063 Aminotransferase class IV C4901_08860 PF02618 YceG-like family C4901_08865 PF02223 Thymidylate kinase C4901_08870 PF13177 DNA polymerase III, delta subunit C4901_08875 PF07238 PilZ domain C4901_08880 PF01026 TatD related DNase C4901_08895 PF11127 Protein of unknown function (DUF2892) C4901_08905 PF00462 Glutaredoxin C4901_08910 PF07690 Major Facilitator Superfamily C4901_08915 PF00403 Heavy-metal-associated domain C4901_08915 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4901_08915 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_08920 PF02374 Anion-transporting ATPase C4901_08925 PF06953 Arsenical resistance operon trans-acting repressor ArsD C4901_08930 PF01451 Low molecular weight phosphotyrosine protein phosphatase C4901_08930 PF12840 Helix-turn-helix domain C4901_08935 PF02567 Phenazine biosynthesis-like protein C4901_08945 PF11755 C4901_08945 C4901_08950 PF07690 Major Facilitator Superfamily C4901_08955 PF07282 C4901_08955 C4901_08960 PF02543 Carbamoyltransferase C4901_08960 PF16861 C4901_08960 C4901_08965 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_08970 PF13242 HAD-hyrolase-like C4901_08975 PF00106 short chain dehydrogenase C4901_08980 PF00534 Glycosyl transferases group 1 C4901_08980 PF13439 Glycosyltransferase Family 4 C4901_08985 PF00534 Glycosyl transferases group 1 C4901_08990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_08995 PF02656 C4901_08995 C4901_09000 PF05175 Methyltransferase small domain C4901_09005 PF01966 HD domain C4901_09005 PF13286 Phosphohydrolase-associated domain C4901_09010 PF01255 Putative undecaprenyl diphosphate synthase C4901_09020 PF13229 Right handed beta helix region C4901_09035 PF03592 Terminase small subunit C4901_09055 PF12686 C4901_09055 C4901_09070 PF07963 Prokaryotic N-terminal methylation motif C4901_09075 PF00293 NUDIX domain C4901_09090 PF12760 Transposase zinc-ribbon domain C4901_09090 PF12762 C4901_09090 C4901_09115 PF14190 C4901_09115 C4901_09120 PF00149 Calcineurin-like phosphoesterase C4901_09135 PF06114 Domain of unknown function (DUF955) C4901_09160 PF14236 C4901_09160 C4901_09165 PF03050 C4901_09165 C4901_09170 PF13443 Cro/C1-type HTH DNA-binding domain C4901_09175 PF16277 C4901_09175 C4901_09190 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C4901_09190 PF04851 Type III restriction enzyme, res subunit C4901_09200 PF14267 C4901_09200 C4901_09215 PF01420 Type I restriction modification DNA specificity domain C4901_09230 PF02384 N-6 DNA Methylase C4901_09245 PF12161 HsdM N-terminal domain C4901_09250 PF13087 AAA domain C4901_09260 PF13604 AAA domain C4901_09310 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_09315 PF02452 PemK-like protein C4901_09330 PF13560 Helix-turn-helix domain C4901_09335 PF05015 Plasmid maintenance system killer protein C4901_09340 PF13614 AAA domain C4901_09355 PF01936 NYN domain C4901_09385 PF01061 C4901_09385 C4901_09390 PF00005 ABC transporter C4901_09395 PF13649 Methyltransferase domain C4901_09400 PF02635 DsrE/DsrF-like family C4901_09405 PF01066 CDP-alcohol phosphatidyltransferase C4901_09410 PF01541 GIY-YIG catalytic domain C4901_09410 PF02151 UvrB/uvrC motif C4901_09410 PF08459 UvrC Helix-hairpin-helix N-terminal C4901_09410 PF14520 Helix-hairpin-helix domain C4901_09415 PF03167 Uracil DNA glycosylase superfamily C4901_09420 PF00933 Glycosyl hydrolase family 3 N terminal domain C4901_09425 PF03734 L,D-transpeptidase catalytic domain C4901_09430 PF01938 TRAM domain C4901_09430 PF05958 tRNA (Uracil-5-)-methyltransferase C4901_09435 PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB C4901_09440 PF00291 Pyridoxal-phosphate dependent enzyme C4901_09445 PF01368 DHH family C4901_09445 PF02272 DHHA1 domain C4901_09455 PF00291 Pyridoxal-phosphate dependent enzyme C4901_09460 PF00742 Homoserine dehydrogenase C4901_09460 PF01842 ACT domain C4901_09460 PF03447 Homoserine dehydrogenase, NAD binding domain C4901_09465 PF00155 Aminotransferase class I and II C4901_09470 PF04430 Protein of unknown function (DUF498/DUF598) C4901_09475 PF00140 Sigma-70 factor, region 1 C4901_09475 PF04539 Sigma-70 region 3 C4901_09475 PF04542 Sigma-70 region 2 C4901_09475 PF04545 Sigma-70, region 4 C4901_09480 PF01476 LysM domain C4901_09480 PF01551 Peptidase family M23 C4901_09485 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) C4901_09490 PF01975 Survival protein SurE C4901_09495 PF01343 Peptidase family S49 C4901_09500 PF00355 Rieske [2Fe-2S] domain C4901_09505 PF13419 Haloacid dehalogenase-like hydrolase C4901_09510 PF00849 RNA pseudouridylate synthase C4901_09525 PF01451 Low molecular weight phosphotyrosine protein phosphatase C4901_09530 PF01451 Low molecular weight phosphotyrosine protein phosphatase C4901_09540 PF02348 Cytidylyltransferase C4901_09545 PF03966 Trm112p-like protein C4901_09550 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C4901_09555 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) C4901_09560 PF00005 ABC transporter C4901_09560 PF00664 ABC transporter transmembrane region C4901_09565 PF02472 Biopolymer transport protein ExbD/TolR C4901_09570 PF01618 C4901_09570 C4901_09575 PF00005 ABC transporter C4901_09580 PF02687 C4901_09580 C4901_09580 PF12704 MacB-like periplasmic core domain C4901_09585 PF05258 C4901_09585 C4901_09590 PF01168 Alanine racemase, N-terminal domain C4901_09600 PF00155 Aminotransferase class I and II C4901_09605 PF00132 Bacterial transferase hexapeptide (six repeats) C4901_09605 PF14602 Hexapeptide repeat of succinyl-transferase C4901_09605 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal C4901_09610 PF01546 Peptidase family M20/M25/M40 C4901_09610 PF07687 Peptidase dimerisation domain C4901_09615 PF00498 FHA domain C4901_09620 PF13444 Acetyltransferase (GNAT) domain C4901_09625 PF01553 Acyltransferase C4901_09630 PF00072 Response regulator receiver domain C4901_09630 PF00486 Transcriptional regulatory protein, C terminal C4901_09635 PF00512 His Kinase A (phospho-acceptor) domain C4901_09635 PF00672 HAMP domain C4901_09635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_09640 PF11127 Protein of unknown function (DUF2892) C4901_09645 PF00459 Inositol monophosphatase family C4901_09660 PF01797 Transposase IS200 like C4901_09665 PF01385 C4901_09665 C4901_09665 PF07282 C4901_09665 C4901_09665 PF12323 C4901_09665 C4901_09670 PF08241 Methyltransferase domain C4901_09675 PF01557 Fumarylacetoacetate (FAA) hydrolase family C4901_09680 PF00384 Molybdopterin oxidoreductase C4901_09680 PF01568 Molydopterin dinucleotide binding domain C4901_09680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4901_09685 PF00037 4Fe-4S binding domain C4901_09685 PF13247 4Fe-4S dicluster domain C4901_09690 PF04976 C4901_09690 C4901_09695 PF01967 MoaC family C4901_09700 PF04055 Radical SAM superfamily C4901_09700 PF06463 Molybdenum Cofactor Synthesis C C4901_09700 PF13353 4Fe-4S single cluster domain C4901_09705 PF02597 ThiS family C4901_09710 PF02391 MoaE protein C4901_09715 PF00005 ABC transporter C4901_09715 PF12848 ABC transporter C4901_09730 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C4901_09730 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C4901_09755 PF12281 C4901_09755 C4901_09760 PF00004 ATPase family associated with various cellular activities (AAA) C4901_09765 PF00149 Calcineurin-like phosphoesterase C4901_09770 PF00149 Calcineurin-like phosphoesterase C4901_09775 PF11740 C4901_09775 C4901_09800 PF02798 Glutathione S-transferase, N-terminal domain C4901_09805 PF02798 Glutathione S-transferase, N-terminal domain C4901_09815 PF08279 HTH domain C4901_09815 PF13280 C4901_09815 C4901_09820 PF00723 Glycosyl hydrolases family 15 C4901_09820 PF09137 Glucodextranase, domain N C4901_09825 PF13561 Enoyl-(Acyl carrier protein) reductase C4901_09835 PF07690 Major Facilitator Superfamily C4901_09840 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_09850 PF10049 C4901_09850 C4901_09855 PF07883 Cupin domain C4901_09865 PF04511 C4901_09865 C4901_09870 PF00529 HlyD family secretion protein C4901_09870 PF16576 C4901_09870 C4901_09875 PF02321 Outer membrane efflux protein C4901_09880 PF07690 Major Facilitator Superfamily C4901_09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_09885 PF03466 LysR substrate binding domain C4901_09890 PF02635 DsrE/DsrF-like family C4901_09895 PF00403 Heavy-metal-associated domain C4901_09900 PF00122 E1-E2 ATPase C4901_09900 PF00403 Heavy-metal-associated domain C4901_09900 PF00702 haloacid dehalogenase-like hydrolase C4901_09905 PF00376 MerR family regulatory protein C4901_09905 PF09278 MerR, DNA binding C4901_09915 PF04542 Sigma-70 region 2 C4901_09915 PF08281 Sigma-70, region 4 C4901_09930 PF00462 Glutaredoxin C4901_09930 PF08534 Redoxin C4901_09935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C4901_09935 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_09940 PF01636 Phosphotransferase enzyme family C4901_09945 PF04293 C4901_09945 C4901_09950 PF04285 C4901_09950 C4901_09955 PF06798 C4901_09955 C4901_09955 PF08298 PrkA AAA domain C4901_09965 PF07690 Major Facilitator Superfamily C4901_09975 PF13618 C4901_09975 C4901_09980 PF00732 GMC oxidoreductase C4901_09980 PF05199 GMC oxidoreductase C4901_09990 PF00892 EamA-like transporter family C4901_10015 PF02678 Pirin C4901_10015 PF05726 Pirin C-terminal cupin domain C4901_10020 PF00293 NUDIX domain C4901_10025 PF00936 BMC domain C4901_10030 PF07728 AAA domain (dynein-related subfamily) C4901_10030 PF08406 C4901_10030 C4901_10040 PF10070 C4901_10040 C4901_10050 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_10050 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4901_10055 PF13519 von Willebrand factor type A domain C4901_10065 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4901_10070 PF01329 Pterin 4 alpha carbinolamine dehydratase C4901_10075 PF00210 Ferritin-like domain C4901_10080 PF00936 BMC domain C4901_10085 PF00936 BMC domain C4901_10090 PF00936 BMC domain C4901_10095 PF03319 Ethanolamine utilisation protein EutN/carboxysome C4901_10100 PF03319 Ethanolamine utilisation protein EutN/carboxysome C4901_10105 PF08936 Carboxysome Shell Carbonic Anhydrase C4901_10110 PF12288 C4901_10110 C4901_10115 PF00101 Ribulose bisphosphate carboxylase, small chain C4901_10120 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain C4901_10120 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain C4901_10125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_10125 PF03466 LysR substrate binding domain C4901_10130 PF01011 PQQ enzyme repeat C4901_10130 PF13360 PQQ-like domain C4901_10130 PF13570 PQQ-like domain C4901_10140 PF07732 Multicopper oxidase C4901_10150 PF01926 50S ribosome-binding GTPase C4901_10150 PF13167 C4901_10150 C4901_10150 PF16360 C4901_10150 C4901_10155 PF17209 C4901_10155 C4901_10160 PF01715 IPP transferase C4901_10165 PF00152 tRNA synthetases class II (D, K and N) C4901_10165 PF01336 OB-fold nucleic acid binding domain C4901_10175 PF16694 C4901_10175 C4901_10180 PF02503 Polyphosphate kinase middle domain C4901_10180 PF13089 Polyphosphate kinase N-terminal domain C4901_10180 PF13090 Polyphosphate kinase C-terminal domain C4901_10190 PF02541 Ppx/GppA phosphatase family C4901_10195 PF01797 Transposase IS200 like C4901_10210 PF00551 Formyl transferase C4901_10230 PF01610 C4901_10230 C4901_10235 PF00593 TonB dependent receptor C4901_10235 PF07715 TonB-dependent Receptor Plug Domain C4901_10240 PF09335 C4901_10240 C4901_10250 PF01566 C4901_10250 C4901_10265 PF01163 RIO1 family C4901_10270 PF10604 Polyketide cyclase / dehydrase and lipid transport C4901_10275 PF07690 Major Facilitator Superfamily C4901_10280 PF01909 Nucleotidyltransferase domain C4901_10285 PF05168 HEPN domain C4901_10295 PF07681 C4901_10295 C4901_10300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C4901_10300 PF02403 Seryl-tRNA synthetase N-terminal domain C4901_10305 PF03937 Flavinator of succinate dehydrogenase C4901_10310 PF13085 2Fe-2S iron-sulfur cluster binding domain C4901_10310 PF13534 4Fe-4S dicluster domain C4901_10315 PF00890 FAD binding domain C4901_10315 PF02910 Fumarate reductase flavoprotein C-term C4901_10320 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4901_10325 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit C4901_10330 PF01571 Aminomethyltransferase folate-binding domain C4901_10335 PF04977 Septum formation initiator C4901_10340 PF00113 Enolase, C-terminal TIM barrel domain C4901_10340 PF03952 Enolase, N-terminal domain C4901_10345 PF00793 DAHP synthetase I family C4901_10350 PF00117 Glutamine amidotransferase class-I C4901_10350 PF06418 CTP synthase N-terminus C4901_10355 PF01171 PP-loop family C4901_10355 PF09179 TilS substrate binding domain C4901_10355 PF11734 TilS substrate C-terminal domain C4901_10360 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C4901_10365 PF01336 OB-fold nucleic acid binding domain C4901_10365 PF02811 PHP domain C4901_10365 PF07733 Bacterial DNA polymerase III alpha subunit C4901_10365 PF14579 Helix-hairpin-helix motif C4901_10370 PF01351 Ribonuclease HII C4901_10375 PF02684 C4901_10375 C4901_10380 PF00132 Bacterial transferase hexapeptide (six repeats) C4901_10380 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 C4901_10385 PF07977 FabA-like domain C4901_10390 PF00132 Bacterial transferase hexapeptide (six repeats) C4901_10390 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD C4901_10395 PF01103 Surface antigen C4901_10395 PF07244 Surface antigen variable number repeat C4901_10400 PF00595 PDZ domain (Also known as DHR or GLGF) C4901_10400 PF02163 Peptidase family M50 C4901_10405 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C4901_10405 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal C4901_10405 PF13288 DXP reductoisomerase C-terminal domain C4901_10410 PF01148 Cytidylyltransferase family C4901_10415 PF01255 Putative undecaprenyl diphosphate synthase C4901_10420 PF01765 Ribosome recycling factor C4901_10425 PF00696 Amino acid kinase family C4901_10430 PF00889 Elongation factor TS C4901_10435 PF00318 Ribosomal protein S2 C4901_10440 PF00557 Metallopeptidase family M24 C4901_10445 PF01909 Nucleotidyltransferase domain C4901_10445 PF01966 HD domain C4901_10445 PF08335 GlnD PII-uridylyltransferase C4901_10450 PF06182 C4901_10450 C4901_10455 PF06182 C4901_10455 C4901_10470 PF01610 C4901_10470 C4901_10485 PF02195 ParB-like nuclease domain C4901_10490 PF00665 Integrase core domain C4901_10490 PF13384 Homeodomain-like domain C4901_10500 PF00593 TonB dependent receptor C4901_10510 PF13520 Amino acid permease C4901_10515 PF01476 LysM domain C4901_10515 PF01520 N-acetylmuramoyl-L-alanine amidase C4901_10515 PF11741 AMIN domain C4901_10520 PF02367 Uncharacterised P-loop hydrolase UPF0079 C4901_10525 PF02367 Uncharacterised P-loop hydrolase UPF0079 C4901_10530 PF01256 Carbohydrate kinase C4901_10530 PF03853 YjeF-related protein N-terminus C4901_10535 PF00929 Exonuclease C4901_10540 PF01329 Pterin 4 alpha carbinolamine dehydratase C4901_10545 PF02132 RecR protein C4901_10545 PF13662 Toprim domain C4901_10550 PF02575 YbaB/EbfC DNA-binding family C4901_10565 PF01007 Inward rectifier potassium channel C4901_10575 PF11583 P-aminobenzoate N-oxygenase AurF C4901_10580 PF04972 BON domain C4901_10585 PF05532 CsbD-like C4901_10595 PF00210 Ferritin-like domain C4901_10600 PF12732 C4901_10600 C4901_10605 PF13396 C4901_10605 C4901_10610 PF00072 Response regulator receiver domain C4901_10610 PF00196 Bacterial regulatory proteins, luxR family C4901_10620 PF14236 C4901_10620 C4901_10625 PF00072 Response regulator receiver domain C4901_10630 PF00990 GGDEF domain C4901_10635 PF00072 Response regulator receiver domain C4901_10635 PF00512 His Kinase A (phospho-acceptor) domain C4901_10635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_10640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_10650 PF00497 Bacterial extracellular solute-binding proteins, family 3 C4901_10650 PF01464 Transglycosylase SLT domain C4901_10655 PF14437 C4901_10655 C4901_10660 PF07690 Major Facilitator Superfamily C4901_10665 PF07690 Major Facilitator Superfamily C4901_10675 PF12697 Alpha/beta hydrolase family C4901_10685 PF09678 C4901_10685 C4901_10690 PF00127 Copper binding proteins, plastocyanin/azurin family C4901_10695 PF01040 UbiA prenyltransferase family C4901_10710 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4901_10715 PF00116 Cytochrome C oxidase subunit II, periplasmic domain C4901_10725 PF00034 Cytochrome c C4901_10730 PF00034 Cytochrome c C4901_10740 PF02810 SEC-C motif C4901_10750 PF08937 MTH538 TIR-like domain (DUF1863) C4901_10755 PF04986 C4901_10755 C4901_10755 PF08937 MTH538 TIR-like domain (DUF1863) C4901_10755 PF14319 C4901_10755 C4901_10760 PF00589 Phage integrase family C4901_10760 PF13495 Phage integrase, N-terminal SAM-like domain C4901_10765 PF00117 Glutamine amidotransferase class-I C4901_10765 PF00958 GMP synthase C terminal domain C4901_10765 PF02540 NAD synthase C4901_10770 PF00478 IMP dehydrogenase / GMP reductase domain C4901_10770 PF00571 CBS domain C4901_10780 PF02601 C4901_10780 C4901_10780 PF13742 C4901_10780 C4901_10785 PF01926 50S ribosome-binding GTPase C4901_10785 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C4901_10790 PF13360 PQQ-like domain C4901_10795 PF09976 Tetratricopeptide repeat C4901_10800 PF13393 Histidyl-tRNA synthetase C4901_10805 PF04551 GcpE protein C4901_10810 PF13413 Helix-turn-helix domain C4901_10810 PF13464 C4901_10810 C4901_10820 PF04055 Radical SAM superfamily C4901_10825 PF00334 Nucleoside diphosphate kinase C4901_10830 PF04384 Iron-sulphur cluster assembly C4901_10835 PF00111 2Fe-2S iron-sulfur cluster binding domain C4901_10840 PF00012 Hsp70 protein C4901_10845 PF07743 HSCB C-terminal oligomerisation domain C4901_10850 PF01521 Iron-sulphur cluster biosynthesis C4901_10855 PF01592 NifU-like N terminal domain C4901_10860 PF00266 Aminotransferase class-V C4901_10865 PF02082 Transcriptional regulator C4901_10870 PF00132 Bacterial transferase hexapeptide (six repeats) C4901_10875 PF00588 SpoU rRNA Methylase family C4901_10880 PF00459 Inositol monophosphatase family C4901_10890 PF00037 4Fe-4S binding domain C4901_10890 PF11953 Domain of unknown function (DUF3470) C4901_10895 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ C4901_10900 PF00448 SRP54-type protein, GTPase domain C4901_10900 PF02881 SRP54-type protein, helical bundle domain C4901_10900 PF02978 Signal peptide binding domain C4901_10905 PF01578 C4901_10905 C4901_10910 PF00571 CBS domain C4901_10910 PF01595 C4901_10910 C4901_10910 PF03471 Transporter associated domain C4901_10915 PF00488 MutS domain V C4901_10920 PF00814 Glycoprotease family C4901_10925 PF04321 RmlD substrate binding domain C4901_10930 PF00248 Aldo/keto reductase family C4901_10935 PF07077 C4901_10935 C4901_10940 PF01011 PQQ enzyme repeat C4901_10940 PF13360 PQQ-like domain C4901_10945 PF00005 ABC transporter C4901_10945 PF06472 C4901_10945 C4901_10950 PF10615 Protein of unknown function (DUF2470) C4901_10950 PF13883 Pyridoxamine 5'-phosphate oxidase C4901_10960 PF00589 Phage integrase family C4901_10975 PF10544 C4901_10975 C4901_10990 PF13091 PLD-like domain C4901_11000 PF10412 Type IV secretion-system coupling protein DNA-binding domain C4901_11020 PF10412 Type IV secretion-system coupling protein DNA-binding domain C4901_11030 PF08751 TrwC relaxase C4901_11030 PF13604 AAA domain C4901_11050 PF15731 C4901_11050 C4901_11055 PF15723 C4901_11055 C4901_11065 PF12728 Helix-turn-helix domain C4901_11075 PF13175 AAA ATPase domain C4901_11080 PF13245 Part of AAA domain C4901_11085 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) C4901_11095 PF05717 C4901_11095 C4901_11100 PF03050 C4901_11100 C4901_11100 PF13005 C4901_11100 C4901_11100 PF13007 C4901_11100 C4901_11100 PF13817 C4901_11100 C4901_11105 PF00589 Phage integrase family C4901_11125 PF13086 AAA domain C4901_11135 PF08681 Protein of unknown function (DUF1778) C4901_11190 PF09720 C4901_11190 C4901_11200 PF05016 Plasmid stabilisation system protein C4901_11205 PF03693 Uncharacterised protein family (UPF0156) C4901_11210 PF00589 Phage integrase family C4901_11215 PF01936 NYN domain C4901_11250 PF08238 Sel1 repeat C4901_11255 PF07690 Major Facilitator Superfamily C4901_11275 PF02599 Global regulator protein family C4901_11280 PF00696 Amino acid kinase family C4901_11280 PF01842 ACT domain C4901_11280 PF13840 ACT domain C4901_11285 PF01411 tRNA synthetases class II (A) C4901_11285 PF02272 DHHA1 domain C4901_11285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C4901_11290 PF02631 RecX family C4901_11295 PF00154 recA bacterial DNA recombination protein C4901_11300 PF02464 Competence-damaged protein C4901_11305 PF04608 Phosphatidylglycerophosphatase A C4901_11310 PF00586 AIR synthase related protein, N-terminal domain C4901_11310 PF02769 AIR synthase related protein, C-terminal domain C4901_11315 PF01029 NusB family C4901_11320 PF00885 6,7-dimethyl-8-ribityllumazine synthase C4901_11325 PF00925 GTP cyclohydrolase II C4901_11325 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C4901_11330 PF00069 Protein kinase domain C4901_11340 PF00677 Lumazine binding domain C4901_11345 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4901_11345 PF01872 RibD C-terminal domain C4901_11350 PF03477 ATP cone domain C4901_11355 PF00464 Serine hydroxymethyltransferase C4901_11360 PF01814 Hemerythrin HHE cation binding domain C4901_11370 PF02355 Protein export membrane protein C4901_11370 PF07549 SecD/SecF GG Motif C4901_11375 PF02355 Protein export membrane protein C4901_11375 PF07549 SecD/SecF GG Motif C4901_11375 PF13721 SecD export protein N-terminal TM region C4901_11380 PF02699 Preprotein translocase subunit C4901_11385 PF01702 Queuine tRNA-ribosyltransferase C4901_11390 PF00072 Response regulator receiver domain C4901_11390 PF00512 His Kinase A (phospho-acceptor) domain C4901_11390 PF00989 PAS fold C4901_11390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_11390 PF08447 PAS fold C4901_11390 PF13185 GAF domain C4901_11390 PF13426 PAS domain C4901_11395 PF02547 Queuosine biosynthesis protein C4901_11410 PF03050 C4901_11410 C4901_11415 PF14236 C4901_11415 C4901_11420 PF05717 C4901_11420 C4901_11430 PF00589 Phage integrase family C4901_11435 PF01610 C4901_11435 C4901_11440 PF01610 C4901_11440 C4901_11460 PF10544 C4901_11460 C4901_11465 PF01609 Transposase DDE domain C4901_11505 PF10412 Type IV secretion-system coupling protein DNA-binding domain C4901_11530 PF10412 Type IV secretion-system coupling protein DNA-binding domain C4901_11540 PF08751 TrwC relaxase C4901_11540 PF13604 AAA domain C4901_11560 PF01850 PIN domain C4901_11570 PF12760 Transposase zinc-ribbon domain C4901_11575 PF14279 C4901_11575 C4901_11580 PF13362 Toprim domain C4901_11585 PF12728 Helix-turn-helix domain C4901_11620 PF01850 PIN domain C4901_11630 PF00990 GGDEF domain C4901_11635 PF00563 EAL domain C4901_11650 PF01610 C4901_11650 C4901_11650 PF13542 C4901_11650 C4901_11665 PF01850 PIN domain C4901_11680 PF09720 C4901_11680 C4901_11700 PF01610 C4901_11700 C4901_11705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_11710 PF07690 Major Facilitator Superfamily C4901_11715 PF02261 Aspartate decarboxylase C4901_11720 PF02569 Pantoate-beta-alanine ligase C4901_11725 PF02548 Ketopantoate hydroxymethyltransferase C4901_11730 PF01712 Deoxynucleoside kinase C4901_11735 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C4901_11740 PF01743 Poly A polymerase head domain C4901_11740 PF12626 Polymerase A arginine-rich C-terminus C4901_11740 PF12627 Probable RNA and SrmB- binding site of polymerase A C4901_11750 PF00085 Thioredoxin C4901_11750 PF14559 Tetratricopeptide repeat C4901_11750 PF14561 Tetratricopeptide repeat C4901_11760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C4901_11760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C4901_11760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C4901_11765 PF01370 NAD dependent epimerase/dehydratase family C4901_11770 PF10685 C4901_11770 C4901_11775 PF13320 C4901_11775 C4901_11780 PF00534 Glycosyl transferases group 1 C4901_11780 PF13439 Glycosyltransferase Family 4 C4901_11785 PF07282 C4901_11785 C4901_11790 PF00535 Glycosyl transferase family 2 C4901_11795 PF00534 Glycosyl transferases group 1 C4901_11795 PF13439 Glycosyltransferase Family 4 C4901_11800 PF00132 Bacterial transferase hexapeptide (six repeats) C4901_11805 PF04932 C4901_11805 C4901_11815 PF14602 Hexapeptide repeat of succinyl-transferase C4901_11820 PF02540 NAD synthase C4901_11825 PF00550 Phosphopantetheine attachment site C4901_11830 PF00501 AMP-binding enzyme C4901_11830 PF13193 AMP-binding enzyme C-terminal domain C4901_11835 PF00733 Asparagine synthase C4901_11835 PF13537 Glutamine amidotransferase domain C4901_11840 PF13401 AAA domain C4901_11860 PF02563 Polysaccharide biosynthesis/export protein C4901_11860 PF10531 SLBB domain C4901_11865 PF02397 C4901_11865 C4901_11870 PF00892 EamA-like transporter family C4901_11875 PF00004 ATPase family associated with various cellular activities (AAA) C4901_11875 PF12002 MgsA AAA+ ATPase C terminal C4901_11875 PF16193 C4901_11875 C4901_11880 PF03548 Outer membrane lipoprotein carrier protein LolA C4901_11885 PF01580 FtsK/SpoIIIE family C4901_11885 PF09397 Ftsk gamma domain C4901_11885 PF13491 C4901_11885 C4901_11890 PF01262 Alanine dehydrogenase/PNT, C-terminal domain C4901_11890 PF05222 Alanine dehydrogenase/PNT, N-terminal domain C4901_11895 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_11900 PF01713 Smr domain C4901_11905 PF02542 YgbB family C4901_11910 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C4901_11915 PF02559 CarD-like/TRCF domain C4901_11920 PF00270 DEAD/DEAH box helicase C4901_11920 PF00271 Helicase conserved C-terminal domain C4901_11920 PF02559 CarD-like/TRCF domain C4901_11920 PF03461 TRCF domain C4901_11930 PF01327 Polypeptide deformylase C4901_11935 PF10972 C4901_11935 C4901_11940 PF01048 Phosphorylase superfamily C4901_11945 PF00156 Phosphoribosyl transferase domain C4901_11950 PF02635 DsrE/DsrF-like family C4901_11955 PF00483 Nucleotidyl transferase C4901_11960 PF02635 DsrE/DsrF-like family C4901_11965 PF00106 short chain dehydrogenase C4901_11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_11975 PF03466 LysR substrate binding domain C4901_11980 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain C4901_11980 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain C4901_11985 PF07728 AAA domain (dynein-related subfamily) C4901_11985 PF08406 C4901_11985 C4901_11990 PF00092 von Willebrand factor type A domain C4901_11995 PF02719 Polysaccharide biosynthesis protein C4901_11995 PF13727 CoA-binding domain C4901_12000 PF00953 Glycosyl transferase family 4 C4901_12005 PF13641 Glycosyltransferase like family 2 C4901_12010 PF01370 NAD dependent epimerase/dehydratase family C4901_12015 PF00005 ABC transporter C4901_12015 PF00664 ABC transporter transmembrane region C4901_12020 PF00483 Nucleotidyl transferase C4901_12020 PF01050 Mannose-6-phosphate isomerase C4901_12025 PF01370 NAD dependent epimerase/dehydratase family C4901_12030 PF00294 pfkB family carbohydrate kinase C4901_12035 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C4901_12040 PF13432 Tetratricopeptide repeat C4901_12045 PF06305 C4901_12045 C4901_12050 PF00216 Bacterial DNA-binding protein C4901_12055 PF00575 S1 RNA binding domain C4901_12060 PF02224 Cytidylate kinase C4901_12065 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C4901_12070 PF02153 Prephenate dehydrogenase C4901_12075 PF00155 Aminotransferase class I and II C4901_12080 PF00800 Prephenate dehydratase C4901_12080 PF01817 Chorismate mutase type II C4901_12080 PF01842 ACT domain C4901_12085 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C4901_12085 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C4901_12090 PF00266 Aminotransferase class-V C4901_12095 PF00521 DNA gyrase/topoisomerase IV, subunit A C4901_12095 PF03989 DNA gyrase C-terminal domain, beta-propeller C4901_12100 PF14236 C4901_12100 C4901_12105 PF01609 Transposase DDE domain C4901_12105 PF13808 C4901_12105 C4901_12105 PF14236 C4901_12105 C4901_12120 PF14236 C4901_12120 C4901_12130 PF05717 C4901_12130 C4901_12135 PF14236 C4901_12135 C4901_12140 PF01527 Transposase C4901_12150 PF00665 Integrase core domain C4901_12155 PF03050 C4901_12155 C4901_12160 PF03050 C4901_12160 C4901_12175 PF01797 Transposase IS200 like C4901_12180 PF01385 C4901_12180 C4901_12180 PF07282 C4901_12180 C4901_12185 PF03824 C4901_12185 C4901_12190 PF00072 Response regulator receiver domain C4901_12190 PF00158 Sigma-54 interaction domain C4901_12190 PF02954 Bacterial regulatory protein, Fis family C4901_12195 PF00586 AIR synthase related protein, N-terminal domain C4901_12195 PF02769 AIR synthase related protein, C-terminal domain C4901_12200 PF01924 Hydrogenase formation hypA family C4901_12205 PF01455 HupF/HypC family C4901_12210 PF00708 Acylphosphatase C4901_12210 PF01300 Telomere recombination C4901_12210 PF07503 HypF finger C4901_12215 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4901_12220 PF01155 Hydrogenase expression/synthesis hypA family C4901_12225 PF00374 Nickel-dependent hydrogenase C4901_12230 PF11939 Protein of unknown function (DUF3457) C4901_12235 PF04809 HupH hydrogenase expression protein, C-terminal conserved region C4901_12240 PF01455 HupF/HypC family C4901_12245 PF01750 Hydrogenase maturation protease C4901_12250 PF01292 Prokaryotic cytochrome b561 C4901_12255 PF00374 Nickel-dependent hydrogenase C4901_12260 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4901_12260 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C4901_12275 PF00374 Nickel-dependent hydrogenase C4901_12280 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit C4901_12280 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal C4901_12285 PF00512 His Kinase A (phospho-acceptor) domain C4901_12285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_12285 PF08448 PAS fold C4901_12295 PF12674 C4901_12295 C4901_12300 PF00083 Sugar (and other) transporter C4901_12305 PF09601 C4901_12305 C4901_12310 PF00563 EAL domain C4901_12315 PF13500 AAA domain C4901_12320 PF01979 Amidohydrolase family C4901_12325 PF00756 Putative esterase C4901_12330 PF00107 Zinc-binding dehydrogenase C4901_12330 PF08240 Alcohol dehydrogenase GroES-like domain C4901_12335 PF10116 C4901_12335 C4901_12355 PF10543 C4901_12355 C4901_12365 PF07669 Eco57I restriction-modification methylase C4901_12365 PF12950 TaqI-like C-terminal specificity domain C4901_12370 PF04555 C4901_12370 C4901_12380 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase C4901_12385 PF07681 C4901_12385 C4901_12385 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_12400 PF00101 Ribulose bisphosphate carboxylase, small chain C4901_12405 PF00004 ATPase family associated with various cellular activities (AAA) C4901_12410 PF00962 Adenosine/AMP deaminase C4901_12415 PF00205 Thiamine pyrophosphate enzyme, central domain C4901_12415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4901_12415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4901_12420 PF10006 C4901_12420 C4901_12430 PF01625 Peptide methionine sulfoxide reductase C4901_12435 PF01641 SelR domain C4901_12440 PF00111 2Fe-2S iron-sulfur cluster binding domain C4901_12440 PF01799 [2Fe-2S] binding domain C4901_12445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4901_12450 PF13478 XdhC Rossmann domain C4901_12455 PF12804 MobA-like NTP transferase domain C4901_12465 PF13411 MerR HTH family regulatory protein C4901_12475 PF08534 Redoxin C4901_12480 PF03100 CcmE C4901_12485 PF04995 C4901_12485 C4901_12490 PF01578 C4901_12490 C4901_12495 PF03379 C4901_12495 C4901_12500 PF00005 ABC transporter C4901_12510 PF03918 Cytochrome C biogenesis protein C4901_12515 PF01578 C4901_12515 C4901_12515 PF16327 C4901_12515 C4901_12520 PF06271 C4901_12520 C4901_12525 PF03739 C4901_12525 C4901_12530 PF03739 C4901_12530 C4901_12535 PF00883 Cytosol aminopeptidase family, catalytic domain C4901_12535 PF02789 Cytosol aminopeptidase family, N-terminal domain C4901_12540 PF04364 DNA polymerase III chi subunit, HolC C4901_12555 PF02537 C4901_12555 C4901_12560 PF02641 Uncharacterized ACR, COG1993 C4901_12565 PF02537 C4901_12565 C4901_12570 PF00583 Acetyltransferase (GNAT) family C4901_12575 PF03167 Uracil DNA glycosylase superfamily C4901_12580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4901_12600 PF00581 Rhodanese-like domain C4901_12615 PF01206 Sulfurtransferase TusA C4901_12620 PF04143 C4901_12620 C4901_12625 PF04143 C4901_12625 C4901_12635 PF04358 DsrC like protein C4901_12640 PF01541 GIY-YIG catalytic domain C4901_12645 PF00196 Bacterial regulatory proteins, luxR family C4901_12650 PF01336 OB-fold nucleic acid binding domain C4901_12650 PF02811 PHP domain C4901_12650 PF07733 Bacterial DNA polymerase III alpha subunit C4901_12665 PF00717 Peptidase S24-like C4901_12665 PF01726 LexA DNA binding domain C4901_12670 PF00107 Zinc-binding dehydrogenase C4901_12670 PF08240 Alcohol dehydrogenase GroES-like domain C4901_12680 PF01850 PIN domain C4901_12685 PF04014 Antidote-toxin recognition MazE C4901_12690 PF00682 HMGL-like C4901_12690 PF08502 LeuA allosteric (dimerisation) domain C4901_12695 PF07690 Major Facilitator Superfamily C4901_12700 PF14534 Domain of unknown function (DUF4440) C4901_12705 PF01066 CDP-alcohol phosphatidyltransferase C4901_12710 PF02666 C4901_12710 C4901_12715 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C4901_12715 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain C4901_12720 PF10369 Small subunit of acetolactate synthase C4901_12720 PF13710 ACT domain C4901_12725 PF00205 Thiamine pyrophosphate enzyme, central domain C4901_12725 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4901_12725 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4901_12750 PF01406 tRNA synthetases class I (C) catalytic domain C4901_12750 PF09190 DALR domain C4901_12755 PF00749 tRNA synthetases class I (E and Q), catalytic domain C4901_12760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C4901_12765 PF00149 Calcineurin-like phosphoesterase C4901_12775 PF01053 Cys/Met metabolism PLP-dependent enzyme C4901_12780 PF00156 Phosphoribosyl transferase domain C4901_12780 PF13522 Glutamine amidotransferase domain C4901_12785 PF02674 C4901_12785 C4901_12790 PF05036 Sporulation related domain C4901_12795 PF08245 Mur ligase middle domain C4901_12800 PF01039 Carboxyl transferase domain C4901_12805 PF00290 Tryptophan synthase alpha chain C4901_12810 PF00291 Pyridoxal-phosphate dependent enzyme C4901_12815 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase C4901_12830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_12830 PF03466 LysR substrate binding domain C4901_12840 PF00437 Type II/IV secretion system protein C4901_12855 PF04014 Antidote-toxin recognition MazE C4901_12865 PF01850 PIN domain C4901_12870 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_12875 PF00248 Aldo/keto reductase family C4901_12880 PF00850 Histone deacetylase domain C4901_12910 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C4901_12915 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) C4901_12920 PF04055 Radical SAM superfamily C4901_12925 PF01494 FAD binding domain C4901_12935 PF04055 Radical SAM superfamily C4901_12940 PF01597 Glycine cleavage H-protein C4901_12945 PF02635 DsrE/DsrF-like family C4901_12950 PF01597 Glycine cleavage H-protein C4901_12955 PF02754 C4901_12955 C4901_12960 PF13534 4Fe-4S dicluster domain C4901_12970 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_12975 PF02754 C4901_12975 C4901_12980 PF13183 4Fe-4S dicluster domain C4901_12985 PF13686 DsrE/DsrF/DrsH-like family C4901_12990 PF01206 Sulfurtransferase TusA C4901_12995 PF00581 Rhodanese-like domain C4901_13000 PF07592 C4901_13000 C4901_13010 PF01435 Peptidase family M48 C4901_13015 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4901_13020 PF13501 Sulfur oxidation protein SoxY C4901_13025 PF08770 Sulphur oxidation protein SoxZ C4901_13035 PF02872 5'-nucleotidase, C-terminal domain C4901_13040 PF00563 EAL domain C4901_13040 PF00990 GGDEF domain C4901_13040 PF13185 GAF domain C4901_13045 PF01609 Transposase DDE domain C4901_13065 PF01914 C4901_13065 C4901_13070 PF13563 2'-5' RNA ligase superfamily C4901_13080 PF00158 Sigma-54 interaction domain C4901_13085 PF00512 His Kinase A (phospho-acceptor) domain C4901_13085 PF00989 PAS fold C4901_13085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_13090 PF02702 Osmosensitive K+ channel His kinase sensor domain C4901_13095 PF02669 C4901_13095 C4901_13100 PF00122 E1-E2 ATPase C4901_13100 PF00702 haloacid dehalogenase-like hydrolase C4901_13110 PF09604 C4901_13110 C4901_13115 PF05593 C4901_13115 C4901_13120 PF03958 Bacterial type II/III secretion system short domain C4901_13130 PF01548 C4901_13130 C4901_13130 PF02371 C4901_13130 C4901_13135 PF00263 C4901_13135 C4901_13145 PF01548 C4901_13145 C4901_13145 PF02371 C4901_13145 C4901_13150 PF00437 Type II/IV secretion system protein C4901_13150 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C4901_13155 PF03050 C4901_13155 C4901_13160 PF14236 C4901_13160 C4901_13165 PF05717 C4901_13165 C4901_13175 PF00437 Type II/IV secretion system protein C4901_13180 PF00482 Type II secretion system (T2SS), protein F C4901_13185 PF07963 Prokaryotic N-terminal methylation motif C4901_13185 PF08334 Type II secretion system (T2SS), protein G C4901_13190 PF07963 Prokaryotic N-terminal methylation motif C4901_13195 PF07963 Prokaryotic N-terminal methylation motif C4901_13200 PF07963 Prokaryotic N-terminal methylation motif C4901_13210 PF02669 C4901_13210 C4901_13215 PF00122 E1-E2 ATPase C4901_13215 PF00702 haloacid dehalogenase-like hydrolase C4901_13220 PF03814 C4901_13220 C4901_13225 PF09604 C4901_13225 C4901_13230 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term C4901_13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_13245 PF00149 Calcineurin-like phosphoesterase C4901_13250 PF03625 Domain of unknown function DUF302 C4901_13260 PF14236 C4901_13260 C4901_13265 PF13557 C4901_13265 C4901_13270 PF00596 Class II Aldolase and Adducin N-terminal domain C4901_13275 PF00990 GGDEF domain C4901_13280 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_13285 PF01850 PIN domain C4901_13290 PF13673 Acetyltransferase (GNAT) domain C4901_13295 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin C4901_13300 PF03544 Gram-negative bacterial TonB protein C-terminal C4901_13305 PF02472 Biopolymer transport protein ExbD/TolR C4901_13310 PF01618 C4901_13310 C4901_13315 PF00392 Bacterial regulatory proteins, gntR family C4901_13315 PF07729 FCD domain C4901_13320 PF12804 MobA-like NTP transferase domain C4901_13325 PF02625 XdhC and CoxI family C4901_13325 PF13478 XdhC Rossmann domain C4901_13330 PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) C4901_13335 PF04115 Ureidoglycolate hydrolase C4901_13340 PF00941 FAD binding domain in molybdopterin dehydrogenase C4901_13340 PF03450 CO dehydrogenase flavoprotein C-terminal domain C4901_13345 PF00111 2Fe-2S iron-sulfur cluster binding domain C4901_13345 PF01799 [2Fe-2S] binding domain C4901_13350 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4901_13350 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C4901_13355 PF12973 ChrR Cupin-like domain C4901_13360 PF00857 Isochorismatase family C4901_13365 PF01979 Amidohydrolase family C4901_13370 PF01019 Gamma-glutamyltranspeptidase C4901_13375 PF06516 C4901_13375 C4901_13380 PF00593 TonB dependent receptor C4901_13380 PF07715 TonB-dependent Receptor Plug Domain C4901_13405 PF04185 Phosphoesterase family C4901_13410 PF01048 Phosphorylase superfamily C4901_13415 PF01791 DeoC/LacD family aldolase C4901_13420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C4901_13435 PF00925 GTP cyclohydrolase II C4901_13435 PF12471 C4901_13435 C4901_13440 PF07958 C4901_13440 C4901_13445 PF14681 Uracil phosphoribosyltransferase C4901_13450 PF00440 Bacterial regulatory proteins, tetR family C4901_13450 PF08362 YcdC-like protein, C-terminal region C4901_13455 PF07690 Major Facilitator Superfamily C4901_13460 PF00563 EAL domain C4901_13460 PF00989 PAS fold C4901_13460 PF00990 GGDEF domain C4901_13460 PF13185 GAF domain C4901_13460 PF13188 PAS domain C4901_13460 PF13426 PAS domain C4901_13465 PF14417 C4901_13465 C4901_13470 PF00072 Response regulator receiver domain C4901_13470 PF00563 EAL domain C4901_13470 PF00989 PAS fold C4901_13470 PF00990 GGDEF domain C4901_13470 PF13188 PAS domain C4901_13475 PF00072 Response regulator receiver domain C4901_13480 PF00512 His Kinase A (phospho-acceptor) domain C4901_13480 PF00989 PAS fold C4901_13480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_13480 PF13188 PAS domain C4901_13485 PF01270 Glycosyl hydrolases family 8 C4901_13490 PF05420 C4901_13490 C4901_13495 PF03170 Bacterial cellulose synthase subunit C4901_13500 PF00535 Glycosyl transferase family 2 C4901_13500 PF07238 PilZ domain C4901_13510 PF05717 C4901_13510 C4901_13515 PF14236 C4901_13515 C4901_13525 PF03050 C4901_13525 C4901_13530 PF03050 C4901_13530 C4901_13540 PF04365 Protein of unknown function (DUF497) C4901_13555 PF01527 Transposase C4901_13560 PF00665 Integrase core domain C4901_13560 PF13565 C4901_13560 C4901_13565 PF13361 UvrD-like helicase C-terminal domain C4901_13575 PF01527 Transposase C4901_13580 PF13276 C4901_13580 C4901_13585 PF02371 C4901_13585 C4901_13600 PF00665 Integrase core domain C4901_13605 PF13683 C4901_13605 C4901_13615 PF05717 C4901_13615 C4901_13625 PF14236 C4901_13625 C4901_13635 PF03050 C4901_13635 C4901_13640 PF03050 C4901_13640 C4901_13655 PF01610 C4901_13655 C4901_13660 PF01610 C4901_13660 C4901_13670 PF05717 C4901_13670 C4901_13675 PF14236 C4901_13675 C4901_13685 PF03050 C4901_13685 C4901_13700 PF03090 C4901_13700 C4901_13705 PF05930 Prophage CP4-57 regulatory protein (AlpA) C4901_13715 PF01695 IstB-like ATP binding protein C4901_13730 PF00665 Integrase core domain C4901_13745 PF01610 C4901_13745 C4901_13745 PF14690 C4901_13745 C4901_13750 PF01610 C4901_13750 C4901_13755 PF01610 C4901_13755 C4901_13765 PF06508 Queuosine biosynthesis protein QueC C4901_13770 PF04055 Radical SAM superfamily C4901_13770 PF13394 4Fe-4S single cluster domain C4901_13775 PF13525 Outer membrane lipoprotein C4901_13780 PF00691 OmpA family C4901_13785 PF04052 TolB amino-terminal domain C4901_13785 PF07676 WD40-like Beta Propeller Repeat C4901_13790 PF13103 TonB C terminal C4901_13795 PF02472 Biopolymer transport protein ExbD/TolR C4901_13800 PF01618 C4901_13800 C4901_13805 PF03061 Thioesterase superfamily C4901_13810 PF05491 Holliday junction DNA helicase ruvB C-terminus C4901_13810 PF05496 Holliday junction DNA helicase ruvB N-terminus C4901_13815 PF01330 RuvA N terminal domain C4901_13815 PF07499 RuvA, C-terminal domain C4901_13815 PF14520 Helix-hairpin-helix domain C4901_13820 PF02075 Crossover junction endodeoxyribonuclease RuvC C4901_13825 PF01709 Transcriptional regulator C4901_13835 PF00293 NUDIX domain C4901_13840 PF00152 tRNA synthetases class II (D, K and N) C4901_13840 PF01336 OB-fold nucleic acid binding domain C4901_13840 PF02938 GAD domain C4901_13845 PF04367 C4901_13845 C4901_13850 PF09723 C4901_13850 C4901_13855 PF00216 Bacterial DNA-binding protein C4901_13865 PF03881 Fructosamine kinase C4901_13870 PF00571 CBS domain C4901_13875 PF01609 Transposase DDE domain C4901_13885 PF00437 Type II/IV secretion system protein C4901_13890 PF02595 Glycerate kinase family C4901_13895 PF11146 C4901_13895 C4901_13900 PF00072 Response regulator receiver domain C4901_13900 PF00989 PAS fold C4901_13900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_13900 PF08448 PAS fold C4901_13905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4901_13905 PF02770 Acyl-CoA dehydrogenase, middle domain C4901_13905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4901_13910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III C4901_13915 PF11295 C4901_13915 C4901_13920 PF04893 C4901_13920 C4901_13925 PF00682 HMGL-like C4901_13925 PF08502 LeuA allosteric (dimerisation) domain C4901_13955 PF00127 Copper binding proteins, plastocyanin/azurin family C4901_13965 PF00436 Single-strand binding protein family C4901_13970 PF00005 ABC transporter C4901_13975 PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase C4901_13980 PF00535 Glycosyl transferase family 2 C4901_13985 PF00294 pfkB family carbohydrate kinase C4901_13985 PF01467 Cytidylyltransferase C4901_13990 PF01075 Glycosyltransferase family 9 (heptosyltransferase) C4901_13995 PF01196 Ribosomal protein L17 C4901_14000 PF01000 RNA polymerase Rpb3/RpoA insert domain C4901_14000 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C4901_14000 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C4901_14005 PF00163 Ribosomal protein S4/S9 N-terminal domain C4901_14005 PF01479 S4 domain C4901_14010 PF00411 Ribosomal protein S11 C4901_14015 PF00416 Ribosomal protein S13/S18 C4901_14020 PF00444 Ribosomal protein L36 C4901_14025 PF00344 SecY translocase C4901_14030 PF00828 Ribosomal protein L18e/L15 C4901_14035 PF00327 Ribosomal protein L30p/L7e C4901_14040 PF00333 Ribosomal protein S5, N-terminal domain C4901_14040 PF03719 Ribosomal protein S5, C-terminal domain C4901_14045 PF00861 Ribosomal L18p/L5e family C4901_14050 PF00347 Ribosomal protein L6 C4901_14055 PF00410 Ribosomal protein S8 C4901_14060 PF00253 Ribosomal protein S14p/S29e C4901_14065 PF00281 Ribosomal protein L5 C4901_14065 PF00673 ribosomal L5P family C-terminus C4901_14070 PF00467 KOW motif C4901_14070 PF17136 C4901_14070 C4901_14075 PF00238 Ribosomal protein L14p/L23e C4901_14080 PF00366 Ribosomal protein S17 C4901_14085 PF00831 Ribosomal L29 protein C4901_14090 PF00252 Ribosomal protein L16p/L10e C4901_14095 PF00189 Ribosomal protein S3, C-terminal domain C4901_14095 PF07650 KH domain C4901_14100 PF00237 Ribosomal protein L22p/L17e C4901_14105 PF00203 Ribosomal protein S19 C4901_14110 PF00181 Ribosomal Proteins L2, RNA binding domain C4901_14110 PF03947 Ribosomal Proteins L2, C-terminal domain C4901_14115 PF00276 Ribosomal protein L23 C4901_14120 PF00573 Ribosomal protein L4/L1 family C4901_14125 PF00297 Ribosomal protein L3 C4901_14130 PF00338 Ribosomal protein S10p/S20e C4901_14135 PF00009 Elongation factor Tu GTP binding domain C4901_14135 PF03143 Elongation factor Tu C-terminal domain C4901_14135 PF03144 Elongation factor Tu domain 2 C4901_14140 PF00009 Elongation factor Tu GTP binding domain C4901_14140 PF00679 Elongation factor G C-terminus C4901_14140 PF03144 Elongation factor Tu domain 2 C4901_14140 PF03764 Elongation factor G, domain IV C4901_14140 PF14492 Elongation Factor G, domain II C4901_14145 PF00177 Ribosomal protein S7p/S5e C4901_14150 PF00164 Ribosomal protein S12/S23 C4901_14155 PF00623 RNA polymerase Rpb1, domain 2 C4901_14155 PF04983 RNA polymerase Rpb1, domain 3 C4901_14155 PF04997 RNA polymerase Rpb1, domain 1 C4901_14155 PF04998 RNA polymerase Rpb1, domain 5 C4901_14155 PF05000 RNA polymerase Rpb1, domain 4 C4901_14160 PF00562 RNA polymerase Rpb2, domain 6 C4901_14160 PF04560 RNA polymerase Rpb2, domain 7 C4901_14160 PF04561 RNA polymerase Rpb2, domain 2 C4901_14160 PF04563 RNA polymerase beta subunit C4901_14160 PF04565 RNA polymerase Rpb2, domain 3 C4901_14160 PF10385 RNA polymerase beta subunit external 1 domain C4901_14165 PF00542 Ribosomal protein L7/L12 C-terminal domain C4901_14165 PF16320 C4901_14165 C4901_14170 PF00466 Ribosomal protein L10 C4901_14175 PF00687 Ribosomal protein L1p/L10e family C4901_14180 PF00298 Ribosomal protein L11, RNA binding domain C4901_14180 PF03946 Ribosomal protein L11, N-terminal domain C4901_14185 PF00467 KOW motif C4901_14185 PF02357 Transcription termination factor nusG C4901_14190 PF00584 SecE/Sec61-gamma subunits of protein translocation complex C4901_14205 PF00009 Elongation factor Tu GTP binding domain C4901_14205 PF03143 Elongation factor Tu C-terminal domain C4901_14205 PF03144 Elongation factor Tu domain 2 C4901_14210 PF00009 Elongation factor Tu GTP binding domain C4901_14230 PF00330 Aconitase family (aconitate hydratase) C4901_14230 PF00694 Aconitase C-terminal domain C4901_14240 PF13191 AAA ATPase domain C4901_14250 PF03309 Type III pantothenate kinase C4901_14255 PF03099 Biotin/lipoate A/B protein ligase family C4901_14285 PF00579 tRNA synthetases class I (W and Y) C4901_14290 PF03702 Uncharacterised protein family (UPF0075) C4901_14295 PF01521 Iron-sulphur cluster biosynthesis C4901_14300 PF04519 C4901_14300 C4901_14310 PF01118 Semialdehyde dehydrogenase, NAD binding domain C4901_14310 PF02774 Semialdehyde dehydrogenase, dimerisation domain C4901_14315 PF13609 Gram-negative porin C4901_14320 PF00563 EAL domain C4901_14320 PF00990 GGDEF domain C4901_14320 PF13185 GAF domain C4901_14330 PF13391 C4901_14330 C4901_14345 PF00380 Ribosomal protein S9/S16 C4901_14350 PF00572 Ribosomal protein L13 C4901_14360 PF02754 C4901_14360 C4901_14360 PF13183 4Fe-4S dicluster domain C4901_14365 PF03232 C4901_14365 C4901_14370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C4901_14375 PF02566 OsmC-like protein C4901_14380 PF00218 Indole-3-glycerol phosphate synthase C4901_14385 PF00591 Glycosyl transferase family, a/b domain C4901_14385 PF02885 Glycosyl transferase family, helical bundle domain C4901_14390 PF00117 Glutamine amidotransferase class-I C4901_14395 PF00425 chorismate binding enzyme C4901_14395 PF04715 Anthranilate synthase component I, N terminal region C4901_14400 PF13419 Haloacid dehalogenase-like hydrolase C4901_14405 PF00834 Ribulose-phosphate 3 epimerase family C4901_14410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain C4901_14410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain C4901_14415 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C4901_14420 PF03544 Gram-negative bacterial TonB protein C-terminal C4901_14425 PF02472 Biopolymer transport protein ExbD/TolR C4901_14430 PF01618 C4901_14430 C4901_14435 PF05425 C4901_14435 C4901_14440 PF00919 Uncharacterized protein family UPF0004 C4901_14440 PF04055 Radical SAM superfamily C4901_14450 PF03625 Domain of unknown function DUF302 C4901_14460 PF01116 Fructose-bisphosphate aldolase class-II C4901_14465 PF00224 Pyruvate kinase, barrel domain C4901_14465 PF02887 Pyruvate kinase, alpha/beta domain C4901_14470 PF00162 Phosphoglycerate kinase C4901_14475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4901_14475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C4901_14480 PF00456 Transketolase, thiamine diphosphate binding domain C4901_14480 PF02779 Transketolase, pyrimidine binding domain C4901_14480 PF02780 Transketolase, C-terminal domain C4901_14485 PF00485 Phosphoribulokinase / Uridine kinase family C4901_14490 PF00459 Inositol monophosphatase family C4901_14495 PF00578 AhpC/TSA family C4901_14500 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein C4901_14505 PF01584 CheW-like domain C4901_14515 PF00072 Response regulator receiver domain C4901_14515 PF01584 CheW-like domain C4901_14515 PF01627 Hpt domain C4901_14515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C4901_14515 PF02895 Signal transducing histidine kinase, homodimeric domain C4901_14520 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C4901_14525 PF01584 CheW-like domain C4901_14530 PF00072 Response regulator receiver domain C4901_14535 PF00072 Response regulator receiver domain C4901_14540 PF08886 Glutamate-cysteine ligase C4901_14545 PF02951 Prokaryotic glutathione synthetase, N-terminal domain C4901_14545 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain C4901_14550 PF03544 Gram-negative bacterial TonB protein C-terminal C4901_14555 PF02622 Uncharacterized ACR, COG1678 C4901_14560 PF03652 Uncharacterised protein family (UPF0081) C4901_14565 PF00156 Phosphoribosyl transferase domain C4901_14570 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C4901_14570 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C4901_14575 PF01979 Amidohydrolase family C4901_14590 PF01177 Asp/Glu/Hydantoin racemase C4901_14595 PF00437 Type II/IV secretion system protein C4901_14600 PF00437 Type II/IV secretion system protein C4901_14605 PF03807 NADP oxidoreductase coenzyme F420-dependent C4901_14605 PF14748 Pyrroline-5-carboxylate reductase dimerisation C4901_14610 PF02325 C4901_14610 C4901_14615 PF00578 AhpC/TSA family C4901_14625 PF00085 Thioredoxin C4901_14630 PF00561 alpha/beta hydrolase fold C4901_14635 PF07021 Methionine biosynthesis protein MetW C4901_14640 PF13000 C4901_14640 C4901_14645 PF03372 Endonuclease/Exonuclease/phosphatase family C4901_14655 PF00156 Phosphoribosyl transferase domain C4901_14660 PF01925 C4901_14660 C4901_14670 PF01747 ATP-sulfurylase C4901_14670 PF14306 PUA-like domain C4901_14675 PF12139 Adenosine-5'-phosphosulfate reductase beta subunit C4901_14675 PF13187 4Fe-4S dicluster domain C4901_14680 PF00890 FAD binding domain C4901_14685 PF03692 C4901_14685 C4901_14690 PF00563 EAL domain C4901_14690 PF00989 PAS fold C4901_14690 PF00990 GGDEF domain C4901_14695 PF03150 Di-haem cytochrome c peroxidase C4901_14700 PF04891 C4901_14700 C4901_14705 PF12838 4Fe-4S dicluster domain C4901_14710 PF05082 Rop-like C4901_14715 PF03270 Protein of unknown function, DUF269 C4901_14720 PF02579 Dinitrogenase iron-molybdenum cofactor C4901_14725 PF00148 Nitrogenase component 1 type Oxidoreductase C4901_14730 PF00148 Nitrogenase component 1 type Oxidoreductase C4901_14735 PF00111 2Fe-2S iron-sulfur cluster binding domain C4901_14740 PF00148 Nitrogenase component 1 type Oxidoreductase C4901_14740 PF11844 Domain of unknown function (DUF3364) C4901_14745 PF00148 Nitrogenase component 1 type Oxidoreductase C4901_14750 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family C4901_14760 PF13289 C4901_14760 C4901_14765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C4901_14775 PF06988 NifT/FixU protein C4901_14780 PF00266 Aminotransferase class-V C4901_14785 PF04319 C4901_14785 C4901_14790 PF01521 Iron-sulphur cluster biosynthesis C4901_14795 PF00037 4Fe-4S binding domain C4901_14800 PF02579 Dinitrogenase iron-molybdenum cofactor C4901_14800 PF04055 Radical SAM superfamily C4901_14810 PF01521 Iron-sulphur cluster biosynthesis C4901_14815 PF00563 EAL domain C4901_14815 PF00990 GGDEF domain C4901_14820 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase C4901_14825 PF01494 FAD binding domain C4901_14830 PF00766 Electron transfer flavoprotein FAD-binding domain C4901_14830 PF01012 Electron transfer flavoprotein domain C4901_14835 PF01012 Electron transfer flavoprotein domain C4901_14845 PF03206 C4901_14845 C4901_14850 PF00682 HMGL-like C4901_14855 PF01592 NifU-like N terminal domain C4901_14860 PF00158 Sigma-54 interaction domain C4901_14860 PF01590 GAF domain C4901_14860 PF02954 Bacterial regulatory protein, Fis family C4901_14875 PF00892 EamA-like transporter family C4901_14880 PF00563 EAL domain C4901_14880 PF00989 PAS fold C4901_14880 PF00990 GGDEF domain C4901_14885 PF01872 RibD C-terminal domain C4901_14900 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_14905 PF01206 Sulfurtransferase TusA C4901_14915 PF00158 Sigma-54 interaction domain C4901_14915 PF02954 Bacterial regulatory protein, Fis family C4901_14915 PF08448 PAS fold C4901_14920 PF07609 C4901_14920 C4901_14925 PF02222 ATP-grasp domain C4901_14930 PF00731 AIR carboxylase C4901_14935 PF00176 SNF2 family N-terminal domain C4901_14935 PF00271 Helicase conserved C-terminal domain C4901_14940 PF01300 Telomere recombination C4901_14940 PF03481 Putative GTP-binding controlling metal-binding C4901_14945 PF13500 AAA domain C4901_14950 PF00202 Aminotransferase class-III C4901_14955 PF00920 Dehydratase family C4901_14960 PF01979 Amidohydrolase family C4901_14970 PF10070 C4901_14970 C4901_14975 PF01116 Fructose-bisphosphate aldolase class-II C4901_14975 PF07876 Stress responsive A/B Barrel Domain C4901_14980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_14980 PF03466 LysR substrate binding domain C4901_14995 PF03029 Conserved hypothetical ATP binding protein C4901_15010 PF00563 EAL domain C4901_15010 PF00990 GGDEF domain C4901_15015 PF01976 C4901_15015 C4901_15025 PF11231 C4901_15025 C4901_15030 PF10070 C4901_15030 C4901_15035 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains C4901_15035 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus C4901_15055 PF07282 C4901_15055 C4901_15060 PF13247 4Fe-4S dicluster domain C4901_15060 PF14711 Respiratory nitrate reductase beta C-terminal C4901_15065 PF02613 Nitrate reductase delta subunit C4901_15075 PF04055 Radical SAM superfamily C4901_15075 PF06463 Molybdenum Cofactor Synthesis C C4901_15080 PF03595 Voltage-dependent anion channel C4901_15090 PF01385 C4901_15090 C4901_15090 PF12323 C4901_15090 C4901_15095 PF14384 C4901_15095 C4901_15100 PF04365 Protein of unknown function (DUF497) C4901_15105 PF11740 C4901_15105 C4901_15110 PF13358 DDE superfamily endonuclease C4901_15110 PF13518 Helix-turn-helix domain C4901_15110 PF13592 C4901_15110 C4901_15115 PF14236 C4901_15115 C4901_15120 PF12728 Helix-turn-helix domain C4901_15125 PF13470 C4901_15125 C4901_15135 PF01385 C4901_15135 C4901_15135 PF12323 C4901_15135 C4901_15140 PF01797 Transposase IS200 like C4901_15150 PF07592 C4901_15150 C4901_15155 PF07592 C4901_15155 C4901_15165 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_15180 PF00115 Cytochrome C and Quinol oxidase polypeptide I C4901_15185 PF00271 Helicase conserved C-terminal domain C4901_15185 PF04851 Type III restriction enzyme, res subunit C4901_15195 PF07963 Prokaryotic N-terminal methylation motif C4901_15200 PF15731 C4901_15200 C4901_15220 PF10049 C4901_15220 C4901_15225 PF14384 C4901_15225 C4901_15240 PF02082 Transcriptional regulator C4901_15245 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_15255 PF03693 Uncharacterised protein family (UPF0156) C4901_15260 PF05016 Plasmid stabilisation system protein C4901_15265 PF14384 C4901_15265 C4901_15270 PF04365 Protein of unknown function (DUF497) C4901_15275 PF01548 C4901_15275 C4901_15275 PF02371 C4901_15275 C4901_15280 PF11740 C4901_15280 C4901_15285 PF08401 C4901_15285 C4901_15290 PF05869 C4901_15290 C4901_15305 PF01131 DNA topoisomerase C4901_15305 PF01751 Toprim domain C4901_15345 PF08751 TrwC relaxase C4901_15345 PF13604 AAA domain C4901_15365 PF04471 Restriction endonuclease C4901_15370 PF10412 Type IV secretion-system coupling protein DNA-binding domain C4901_15375 PF01402 Ribbon-helix-helix protein, copG family C4901_15420 PF01610 C4901_15420 C4901_15420 PF13542 C4901_15420 C4901_15425 PF00691 OmpA family C4901_15440 PF13560 Helix-turn-helix domain C4901_15445 PF05973 C4901_15445 C4901_15455 PF13481 AAA domain C4901_15465 PF00665 Integrase core domain C4901_15470 PF07963 Prokaryotic N-terminal methylation motif C4901_15475 PF00589 Phage integrase family C4901_15480 PF01343 Peptidase family S49 C4901_15490 PF00563 EAL domain C4901_15500 PF06146 C4901_15500 C4901_15505 PF00578 AhpC/TSA family C4901_15505 PF10417 C-terminal domain of 1-Cys peroxiredoxin C4901_15510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C4901_15510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C4901_15515 PF00175 Oxidoreductase NAD-binding domain C4901_15515 PF00258 Flavodoxin C4901_15515 PF00667 FAD binding domain C4901_15525 PF00009 Elongation factor Tu GTP binding domain C4901_15530 PF01507 Phosphoadenosine phosphosulfate reductase family C4901_15535 PF01507 Phosphoadenosine phosphosulfate reductase family C4901_15540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C4901_15540 PF03466 LysR substrate binding domain C4901_15575 PF00032 Cytochrome b(C-terminal)/b6/petD C4901_15575 PF00033 Cytochrome b(N-terminal)/b6/petB C4901_15590 PF00106 short chain dehydrogenase C4901_15595 PF00106 short chain dehydrogenase C4901_15600 PF00034 Cytochrome c C4901_15615 PF00563 EAL domain C4901_15620 PF03704 Bacterial transcriptional activator domain C4901_15620 PF13191 AAA ATPase domain C4901_15630 PF13560 Helix-turn-helix domain C4901_15635 PF07804 HipA-like C-terminal domain C4901_15635 PF13657 HipA N-terminal domain C4901_15640 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C4901_15645 PF00528 Binding-protein-dependent transport system inner membrane component C4901_15650 PF00528 Binding-protein-dependent transport system inner membrane component C4901_15655 PF00005 ABC transporter C4901_15655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4901_15660 PF00005 ABC transporter C4901_15660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C4901_15665 PF00580 UvrD/REP helicase N-terminal domain C4901_15665 PF12705 PD-(D/E)XK nuclease superfamily C4901_15665 PF13361 UvrD-like helicase C-terminal domain C4901_15670 PF00929 Exonuclease C4901_15675 PF07690 Major Facilitator Superfamily C4901_15680 PF12840 Helix-turn-helix domain C4901_15685 PF08808 C4901_15685 C4901_15690 PF09722 C4901_15690 C4901_15695 PF14236 C4901_15695 C4901_15705 PF01610 C4901_15705 C4901_15705 PF13542 C4901_15705 C4901_15710 PF04343 C4901_15710 C4901_15715 PF04343 C4901_15715 C4901_15730 PF00665 Integrase core domain C4901_15735 PF13384 Homeodomain-like domain C4901_15745 PF01850 PIN domain C4901_15760 PF00140 Sigma-70 factor, region 1 C4901_15760 PF03979 Sigma-70 factor, region 1 C4901_15760 PF04539 Sigma-70 region 3 C4901_15760 PF04542 Sigma-70 region 2 C4901_15760 PF04545 Sigma-70, region 4 C4901_15760 PF04546 Sigma-70, non-essential region C4901_15765 PF01807 CHC2 zinc finger C4901_15765 PF08275 DNA primase catalytic core, N-terminal domain C4901_15765 PF08278 DNA primase DnaG DnaB-binding C4901_15765 PF10410 DnaB-helicase binding domain of primase C4901_15765 PF13662 Toprim domain C4901_15770 PF09424 Yqey-like protein C4901_15775 PF01165 Ribosomal protein S21 C4901_15780 PF00814 Glycoprotease family C4901_15785 PF02660 C4901_15785 C4901_15790 PF02152 Dihydroneopterin aldolase C4901_15805 PF13505 Outer membrane protein beta-barrel domain C4901_15815 PF14236 C4901_15815 C4901_15820 PF13505 Outer membrane protein beta-barrel domain C4901_15825 PF13561 Enoyl-(Acyl carrier protein) reductase C4901_15830 PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase C4901_15840 PF07728 AAA domain (dynein-related subfamily) C4901_15840 PF08406 C4901_15840 C4901_15845 PF01743 Poly A polymerase head domain C4901_15845 PF01966 HD domain C4901_15845 PF12627 Probable RNA and SrmB- binding site of polymerase A C4901_15850 PF10023 C4901_15850 C4901_15855 PF00076 RNA recognition motif C4901_15860 PF13460 NADH(P)-binding C4901_15865 PF01464 Transglycosylase SLT domain C4901_15865 PF14718 Soluble lytic murein transglycosylase L domain C4901_15870 PF00171 Aldehyde dehydrogenase family C4901_15875 PF13505 Outer membrane protein beta-barrel domain C4901_15880 PF10672 S-adenosylmethionine-dependent methyltransferase C4901_15885 PF03190 Protein of unknown function, DUF255 C4901_15890 PF00581 Rhodanese-like domain C4901_15895 PF14342 C4901_15895 C4901_15905 PF00294 pfkB family carbohydrate kinase C4901_15910 PF02347 Glycine cleavage system P-protein C4901_15915 PF08534 Redoxin C4901_15920 PF02347 Glycine cleavage system P-protein C4901_15930 PF01571 Aminomethyltransferase folate-binding domain C4901_15930 PF08669 Glycine cleavage T-protein C-terminal barrel domain C4901_15935 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein C4901_15940 PF00158 Sigma-54 interaction domain C4901_15940 PF02954 Bacterial regulatory protein, Fis family C4901_15955 PF13641 Glycosyltransferase like family 2 C4901_15970 PF02350 UDP-N-acetylglucosamine 2-epimerase C4901_15980 PF03412 Peptidase C39 family C4901_15995 PF03372 Endonuclease/Exonuclease/phosphatase family C4901_16000 PF00462 Glutaredoxin C4901_16000 PF13511 C4901_16000 C4901_16005 PF01432 Peptidase family M3 C4901_16010 PF01488 Shikimate / quinate 5-dehydrogenase C4901_16010 PF08501 Shikimate dehydrogenase substrate binding domain C4901_16015 PF01699 Sodium/calcium exchanger protein C4901_16020 PF13410 Glutathione S-transferase, C-terminal domain C4901_16020 PF13417 Glutathione S-transferase, N-terminal domain C4901_16025 PF01040 UbiA prenyltransferase family C4901_16030 PF12728 Helix-turn-helix domain C4901_16045 PF04326 Divergent AAA domain C4901_16045 PF13749 ATP-dependent DNA helicase recG C-terminal C4901_16055 PF04014 Antidote-toxin recognition MazE C4901_16060 PF01850 PIN domain C4901_16065 PF00270 DEAD/DEAH box helicase C4901_16065 PF00271 Helicase conserved C-terminal domain C4901_16065 PF17191 C4901_16065 C4901_16070 PF01042 Endoribonuclease L-PSP C4901_16075 PF02824 TGS domain C4901_16075 PF04607 Region found in RelA / SpoT proteins C4901_16075 PF13291 ACT domain C4901_16075 PF13328 HD domain C4901_16080 PF01192 RNA polymerase Rpb6 C4901_16085 PF00625 Guanylate kinase C4901_16090 PF00069 Protein kinase domain C4901_16095 PF13672 Protein phosphatase 2C C4901_16100 PF01138 3' exoribonuclease family, domain 1 C4901_16100 PF03725 3' exoribonuclease family, domain 2 C4901_16105 PF01725 Ham1 family C4901_16110 PF04055 Radical SAM superfamily C4901_16110 PF06969 HemN C-terminal domain C4901_16115 PF03653 C4901_16115 C4901_16120 PF01206 Sulfurtransferase TusA C4901_16125 PF02635 DsrE/DsrF-like family C4901_16130 PF00440 Bacterial regulatory proteins, tetR family C4901_16130 PF16295 C4901_16130 C4901_16135 PF01966 HD domain C4901_16135 PF11871 C4901_16135 C4901_16140 PF02321 Outer membrane efflux protein C4901_16150 PF00873 AcrB/AcrD/AcrF family C4901_16160 PF07282 C4901_16160 C4901_16165 PF01850 PIN domain C4901_16180 PF11336 C4901_16180 C4901_16185 PF02492 CobW/HypB/UreG, nucleotide-binding domain C4901_16190 PF01730 UreF C4901_16195 PF02814 UreE urease accessory protein, N-terminal domain C4901_16195 PF05194 UreE urease accessory protein, C-terminal domain C4901_16200 PF00449 Urease alpha-subunit, N-terminal domain C4901_16200 PF01979 Amidohydrolase family C4901_16205 PF00699 Urease beta subunit C4901_16210 PF00547 Urease, gamma subunit C4901_16215 PF01774 UreD urease accessory protein C4901_16220 PF07642 C4901_16220 C4901_16225 PF00873 AcrB/AcrD/AcrF family C4901_16230 PF16576 C4901_16230 C4901_16235 PF02321 Outer membrane efflux protein C4901_16245 PF01292 Prokaryotic cytochrome b561 C4901_16255 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C4901_16265 PF00270 DEAD/DEAH box helicase C4901_16265 PF00271 Helicase conserved C-terminal domain C4901_16270 PF01208 Uroporphyrinogen decarboxylase (URO-D) C4901_16275 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_16275 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C4901_16280 PF00310 Glutamine amidotransferases class-II C4901_16280 PF01493 GXGXG motif C4901_16280 PF01645 Conserved region in glutamate synthase C4901_16280 PF04898 Glutamate synthase central domain C4901_16285 PF01761 3-dehydroquinate synthase C4901_16290 PF01202 Shikimate kinase C4901_16295 PF00263 C4901_16295 C4901_16295 PF03958 Bacterial type II/III secretion system short domain C4901_16300 PF13808 C4901_16300 C4901_16300 PF14236 C4901_16300 C4901_16315 PF11741 AMIN domain C4901_16320 PF04351 Pilus assembly protein, PilP C4901_16325 PF04350 Pilus assembly protein, PilO C4901_16330 PF05137 C4901_16330 C4901_16335 PF11104 Type IV pilus assembly protein PilM; C4901_16340 PF00905 Penicillin binding protein transpeptidase domain C4901_16340 PF00912 Transglycosylase C4901_16340 PF17092 C4901_16340 C4901_16350 PF00750 tRNA synthetases class I (R) C4901_16350 PF03485 Arginyl tRNA synthetase N terminal domain C4901_16350 PF05746 DALR anticodon binding domain C4901_16355 PF05036 Sporulation related domain C4901_16360 PF00581 Rhodanese-like domain C4901_16365 PF02560 Cyanate lyase C-terminal domain C4901_16370 PF00005 ABC transporter C4901_16375 PF00528 Binding-protein-dependent transport system inner membrane component C4901_16380 PF13379 NMT1-like family C4901_16385 PF00158 Sigma-54 interaction domain C4901_16385 PF01590 GAF domain C4901_16385 PF02954 Bacterial regulatory protein, Fis family C4901_16390 PF02566 OsmC-like protein C4901_16395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4901_16395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C4901_16400 PF02675 S-adenosylmethionine decarboxylase C4901_16405 PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) C4901_16410 PF01564 Spermine/spermidine synthase C4901_16410 PF17284 C4901_16410 C4901_16415 PF00317 Ribonucleotide reductase, all-alpha domain C4901_16415 PF02867 Ribonucleotide reductase, barrel domain C4901_16415 PF03477 ATP cone domain C4901_16430 PF01850 PIN domain C4901_16450 PF01145 SPFH domain / Band 7 family C4901_16455 PF01850 PIN domain C4901_16460 PF04014 Antidote-toxin recognition MazE C4901_16465 PF01841 Transglutaminase-like superfamily C4901_16470 PF01206 Sulfurtransferase TusA C4901_16475 PF00268 Ribonucleotide reductase, small chain C4901_16485 PF04264 YceI-like domain C4901_16490 PF12802 MarR family C4901_16495 PF01471 Putative peptidoglycan binding domain C4901_16500 PF01471 Putative peptidoglycan binding domain C4901_16505 PF00873 AcrB/AcrD/AcrF family C4901_16510 PF16576 C4901_16510 C4901_16515 PF02321 Outer membrane efflux protein C4901_16520 PF00043 Glutathione S-transferase, C-terminal domain C4901_16520 PF13409 Glutathione S-transferase, N-terminal domain C4901_16525 PF01987 Mitochondrial biogenesis AIM24 C4901_16530 PF00528 Binding-protein-dependent transport system inner membrane component C4901_16535 PF00005 ABC transporter C4901_16540 PF00994 Probable molybdopterin binding domain C4901_16545 PF00994 Probable molybdopterin binding domain C4901_16545 PF03453 MoeA N-terminal region (domain I and II) C4901_16545 PF03454 MoeA C-terminal region (domain IV) C4901_16550 PF12804 MobA-like NTP transferase domain C4901_16555 PF01936 NYN domain C4901_16560 PF00384 Molybdopterin oxidoreductase C4901_16560 PF01568 Molydopterin dinucleotide binding domain C4901_16560 PF04324 BFD-like [2Fe-2S] binding domain C4901_16560 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C4901_16565 PF13372 Alginate export C4901_16570 PF07690 Major Facilitator Superfamily C4901_16575 PF07690 Major Facilitator Superfamily C4901_16580 PF00581 Rhodanese-like domain C4901_16595 PF00909 Ammonium Transporter Family C4901_16600 PF00543 Nitrogen regulatory protein P-II C4901_16605 PF01717 Cobalamin-independent synthase, Catalytic domain C4901_16605 PF08267 Cobalamin-independent synthase, N-terminal domain C4901_16610 PF02353 Mycolic acid cyclopropane synthetase C4901_16615 PF04173 C4901_16615 C4901_16615 PF07680 C4901_16615 C4901_16620 PF09694 C4901_16620 C4901_16625 PF04380 C4901_16625 C4901_16645 PF14236 C4901_16645 C4901_16650 PF01381 Helix-turn-helix C4901_16660 PF01850 PIN domain C4901_16665 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system C4901_16685 PF03060 Nitronate monooxygenase C4901_16695 PF01443 Viral (Superfamily 1) RNA helicase C4901_16705 PF04471 Restriction endonuclease C4901_16710 PF07282 C4901_16710 C4901_16720 PF00817 impB/mucB/samB family C4901_16720 PF11799 impB/mucB/samB family C-terminal domain C4901_16725 PF00563 EAL domain C4901_16725 PF00672 HAMP domain C4901_16725 PF00990 GGDEF domain C4901_16730 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein C4901_16740 PF13531 Bacterial extracellular solute-binding protein C4901_16745 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase C4901_16745 PF09364 XFP N-terminal domain C4901_16750 PF07005 Protein of unknown function, DUF1537 C4901_16750 PF17042 C4901_16750 C4901_16755 PF00723 Glycosyl hydrolases family 15 C4901_16760 PF01197 Ribosomal protein L31 C4901_16765 PF00390 Malic enzyme, N-terminal domain C4901_16765 PF03949 Malic enzyme, NAD binding domain C4901_16770 PF05175 Methyltransferase small domain C4901_16775 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C4901_16775 PF12833 Helix-turn-helix domain C4901_16780 PF01613 Flavin reductase like domain C4901_16790 PF00501 AMP-binding enzyme C4901_16795 PF00378 Enoyl-CoA hydratase/isomerase family C4901_16795 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C4901_16795 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C4901_16800 PF00108 Thiolase, N-terminal domain C4901_16800 PF02803 Thiolase, C-terminal domain C4901_16805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C4901_16805 PF00766 Electron transfer flavoprotein FAD-binding domain C4901_16805 PF00890 FAD binding domain C4901_16805 PF02770 Acyl-CoA dehydrogenase, middle domain C4901_16810 PF07682 Sulphur oxygenase reductase C4901_16815 PF07992 Pyridine nucleotide-disulphide oxidoreductase C4901_16825 PF08241 Methyltransferase domain C4901_16830 PF05170 C4901_16830 C4901_16835 PF10412 Type IV secretion-system coupling protein DNA-binding domain C4901_16840 PF03389 MobA/MobL family C4901_16855 PF00205 Thiamine pyrophosphate enzyme, central domain C4901_16855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C4901_16855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C4901_16865 PF00027 Cyclic nucleotide-binding domain C4901_16870 PF01225 Mur ligase family, catalytic domain C4901_16870 PF02875 Mur ligase family, glutamate ligase domain C4901_16870 PF08245 Mur ligase middle domain C4901_16880 PF00570 HRDC domain C4901_16880 PF01612 3'-5' exonuclease C4901_16885 PF01926 50S ribosome-binding GTPase C4901_16890 PF09499 C4901_16890 C4901_16895 PF01555 DNA methylase C4901_16905 PF00476 DNA polymerase family A C4901_16905 PF01367 5'-3' exonuclease, C-terminal SAM fold C4901_16905 PF01612 3'-5' exonuclease C4901_16905 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C4901_16910 PF03641 Possible lysine decarboxylase C4901_16915 PF01636 Phosphotransferase enzyme family C4901_16925 PF00990 GGDEF domain C4901_16930 PF00580 UvrD/REP helicase N-terminal domain C4901_16930 PF13361 UvrD-like helicase C-terminal domain C4901_16940 PF01906 Putative heavy-metal-binding C4901_16945 PF01906 Putative heavy-metal-binding C4901_16950 PF04012 C4901_16950 C4901_16965 PF04326 Divergent AAA domain C4901_16965 PF13749 ATP-dependent DNA helicase recG C-terminal C4901_16970 PF13614 AAA domain C4901_16975 PF01380 SIS domain C4901_16975 PF13522 Glutamine amidotransferase domain C4901_16980 PF00132 Bacterial transferase hexapeptide (six repeats) C4901_16980 PF12804 MobA-like NTP transferase domain C4901_16985 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C4901_16990 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C4901_16990 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C4901_16995 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4901_16995 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4901_17000 PF00231 ATP synthase C4901_17005 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C4901_17005 PF00306 ATP synthase alpha/beta chain, C terminal domain C4901_17005 PF02874 ATP synthase alpha/beta family, beta-barrel domain C4901_17010 PF00213 ATP synthase delta (OSCP) subunit C4901_17015 PF00430 ATP synthase B/B' CF(0) C4901_17020 PF00137 ATP synthase subunit C C4901_17025 PF00119 ATP synthase A chain C4901_17040 PF02195 ParB-like nuclease domain C4901_17045 PF13614 AAA domain C4901_17050 PF02527 rRNA small subunit methyltransferase G C4901_17055 PF01134 Glucose inhibited division protein A C4901_17055 PF13932 GidA associated domain 3 C4901_17070 PF07963 Prokaryotic N-terminal methylation motif C4901_17075 PF07963 Prokaryotic N-terminal methylation motif C4901_17080 PF07963 Prokaryotic N-terminal methylation motif C4901_17085 PF07963 Prokaryotic N-terminal methylation motif C4901_17085 PF16732 C4901_17085 C4901_17090 PF07726 ATPase family associated with various cellular activities (AAA) C4901_17095 PF01882 C4901_17095 C4901_17100 PF01841 Transglutaminase-like superfamily C4901_17100 PF11992 C4901_17100 C4901_17100 PF13559 C4901_17100 C4901_17105 PF06965 Na+/H+ antiporter 1 C4901_17110 PF01926 50S ribosome-binding GTPase C4901_17110 PF10396 GTP-binding protein TrmE N-terminus C4901_17110 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE C4901_17115 PF02096 60Kd inner membrane protein C4901_17115 PF14849 YidC periplasmic domain C4901_17120 PF01809 C4901_17120 C4901_17125 PF00825 Ribonuclease P