C4901_00010 SM00382 ATPases associated with a variety of cellular activities C4901_00010 SM00760 Bacterial dnaA protein helix-turn-helix domain C4901_00015 SM00480 DNA polymerase III beta subunit C4901_00025 SM00387 Histidine kinase-like ATPases C4901_00025 SM00433 TopoisomeraseII C4901_00110 SM00478 endonuclease III C4901_00125 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_00255 SM00450 Rhodanese Homology Domain C4901_00415 SM00357 Cold shock protein domain C4901_00415 SM00382 ATPases associated with a variety of cellular activities C4901_00415 SM00959 Rho termination factor, N-terminal domain C4901_00425 SM00487 DEAD-like helicases superfamily C4901_00425 SM00490 helicase superfamily c-terminal domain C4901_00440 SM01007 Class II Aldolase and Adducin N-terminal domain C4901_00445 SM00862 Transcriptional regulatory protein, C terminal C4901_00455 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain C4901_00500 SM01209 C4901_00500 C4901_00500 SM01210 C4901_00500 C4901_00505 SM00798 AICARFT/IMPCHase bienzyme C4901_00505 SM00851 MGS-like domain C4901_00530 SM00878 Biotin carboxylase C-terminal domain C4901_00570 SM00883 Chaperonin 10 Kd subunit C4901_00600 SM00822 C4901_00600 C4901_00690 SM00091 PAS domain C4901_00690 SM00267 diguanylate cyclase C4901_00695 SM00342 helix_turn_helix, arabinose operon control protein C4901_00770 SM00996 S-adenosyl-L-homocysteine hydrolase C4901_00770 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain C4901_00800 SM00028 Tetratricopeptide repeats C4901_00820 SM00257 Lysin motif C4901_00830 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C4901_00830 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C4901_00830 SM00493 C4901_00830 C4901_00860 SM00450 Rhodanese Homology Domain C4901_00865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C4901_00880 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C4901_00880 SM00245 tail specific protease C4901_00920 SM00448 cheY-homologous receiver domain C4901_00920 SM00862 Transcriptional regulatory protein, C terminal C4901_00925 SM00387 Histidine kinase-like ATPases C4901_00925 SM00388 His Kinase A (phosphoacceptor) domain C4901_00945 SM00345 helix_turn_helix gluconate operon transcriptional repressor C4901_00945 SM00866 C4901_00945 C4901_00955 SM00345 helix_turn_helix gluconate operon transcriptional repressor C4901_00955 SM00866 C4901_00955 C4901_00970 SM00567 E-Z type HEAT repeats C4901_01000 SM00382 ATPases associated with a variety of cellular activities C4901_01010 SM00382 ATPases associated with a variety of cellular activities C4901_01020 SM01004 Delta-aminolevulinic acid dehydratase C4901_01095 SM00487 DEAD-like helicases superfamily C4901_01095 SM00490 helicase superfamily c-terminal domain C4901_01095 SM00847 Helicase associated domain (HA2) Add an annotation C4901_01100 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_01100 SM00876 Biotin and Thiamin Synthesis associated domain C4901_01105 SM00984 UDP binding domain C4901_01150 SM00650 Ribosomal RNA adenine dimethylases C4901_01160 SM00563 Phosphate acyltransferases C4901_01205 SM01230 C4901_01205 C4901_01220 SM00100 Cyclic nucleotide-monophosphate binding domain C4901_01220 SM00419 helix_turn_helix, cAMP Regulatory protein C4901_01245 SM00347 helix_turn_helix multiple antibiotic resistance protein C4901_01290 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_01335 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_01380 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_01460 SM00845 GatB domain C4901_01525 SM00327 von Willebrand factor (vWF) type A domain C4901_01560 SM00530 Helix-turn-helix XRE-family like proteins C4901_01565 SM00530 Helix-turn-helix XRE-family like proteins C4901_01595 SM00478 endonuclease III C4901_01595 SM01009 AlkA N-terminal domain C4901_01605 SM00091 PAS domain C4901_01605 SM00387 Histidine kinase-like ATPases C4901_01605 SM00388 His Kinase A (phosphoacceptor) domain C4901_01610 SM00382 ATPases associated with a variety of cellular activities C4901_01610 SM00448 cheY-homologous receiver domain C4901_01625 SM00382 ATPases associated with a variety of cellular activities C4901_01645 SM01011 Aminopeptidase P, N-terminal domain C4901_01700 SM00052 Putative diguanylate phosphodiesterase C4901_01700 SM00267 diguanylate cyclase C4901_01700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C4901_01715 SM00829 Enoylreductase C4901_01755 SM00382 ATPases associated with a variety of cellular activities C4901_01780 SM00965 Secretin and TonB N terminus short domain C4901_01795 SM00028 Tetratricopeptide repeats C4901_01895 SM00382 ATPases associated with a variety of cellular activities C4901_01900 SM00382 ATPases associated with a variety of cellular activities C4901_01900 SM00962 SRP54-type protein, GTPase domain C4901_01900 SM00963 SRP54-type protein, helical bundle domain C4901_01930 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain C4901_01930 SM01232 C4901_01930 C4901_01950 SM00382 ATPases associated with a variety of cellular activities C4901_01995 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain C4901_02130 SM00470 ParB-like nuclease domain C4901_02205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C4901_02205 SM00450 Rhodanese Homology Domain C4901_02230 SM00448 cheY-homologous receiver domain C4901_02230 SM00850 LytTr DNA-binding domain C4901_02280 SM00382 ATPases associated with a variety of cellular activities C4901_02280 SM00464 Found in ATP-dependent protease La (LON) C4901_02290 SM01219 C4901_02290 C4901_02330 SM00382 ATPases associated with a variety of cellular activities C4901_02330 SM01086 C-terminal, D2-small domain, of ClpB protein C4901_02335 SM00831 Cation transporter/ATPase, N-terminus C4901_02340 SM00116 Domain in cystathionine beta-synthase and other proteins. C4901_02385 SM00937 C4901_02385 C4901_02400 SM00028 Tetratricopeptide repeats C4901_02420 SM01400 C4901_02420 C4901_02480 SM00530 Helix-turn-helix XRE-family like proteins C4901_02515 SM00487 DEAD-like helicases superfamily C4901_02515 SM00490 helicase superfamily c-terminal domain C4901_02535 SM01321 C4901_02535 C4901_02555 SM00460 Transglutaminase/protease-like homologues C4901_02565 SM00530 Helix-turn-helix XRE-family like proteins C4901_02680 SM00357 Cold shock protein domain C4901_02715 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_02730 SM00116 Domain in cystathionine beta-synthase and other proteins. C4901_02730 SM01091 Transporter associated domain C4901_02810 SM00849 Metallo-beta-lactamase superfamily C4901_02950 SM00966 SpoVT / AbrB like domain C4901_02995 SM00382 ATPases associated with a variety of cellular activities C4901_03015 SM00116 Domain in cystathionine beta-synthase and other proteins. C4901_03025 SM00382 ATPases associated with a variety of cellular activities C4901_03085 SM00382 ATPases associated with a variety of cellular activities C4901_03110 SM00382 ATPases associated with a variety of cellular activities C4901_03215 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C4901_03235 SM00710 Parallel beta-helix repeats C4901_03260 SM00749 bacterial OsmY and nodulation domain C4901_03320 SM01192 C4901_03320 C4901_03320 SM01193 C4901_03320 C4901_03335 SM00382 ATPases associated with a variety of cellular activities C4901_03340 SM00052 Putative diguanylate phosphodiesterase C4901_03340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_03340 SM00267 diguanylate cyclase C4901_03425 SM00842 Cell division protein FtsA C4901_03430 SM00864 Tubulin/FtsZ family, GTPase domain C4901_03430 SM00865 Tubulin/FtsZ family, C-terminal domain C4901_03450 SM00957 SecA DEAD-like domain C4901_03450 SM00958 SecA preprotein cross-linking domain C4901_03535 SM00947 Carbonic anhydrase C4901_03540 SM00834 Putative regulatory protein C4901_03545 SM00382 ATPases associated with a variety of cellular activities C4901_03560 SM00382 ATPases associated with a variety of cellular activities C4901_03560 SM00404 Protein tyrosine phosphatase, catalytic domain motif C4901_03570 SM00960 Roadblock/LC7 domain C4901_03595 SM00382 ATPases associated with a variety of cellular activities C4901_03620 SM00387 Histidine kinase-like ATPases C4901_03620 SM00433 TopoisomeraseII C4901_03625 SM00434 DNA Topoisomerase IV C4901_03640 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C4901_03665 SM00267 diguanylate cyclase C4901_03730 SM00670 Large family of predicted nucleotide-binding domains C4901_03740 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_03740 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C4901_03740 SM00387 Histidine kinase-like ATPases C4901_03740 SM00388 His Kinase A (phosphoacceptor) domain C4901_03740 SM00448 cheY-homologous receiver domain C4901_03745 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_03745 SM00091 PAS domain C4901_03745 SM00387 Histidine kinase-like ATPases C4901_03745 SM00388 His Kinase A (phosphoacceptor) domain C4901_03745 SM00448 cheY-homologous receiver domain C4901_03760 SM00448 cheY-homologous receiver domain C4901_03765 SM01130 C4901_03765 C4901_03770 SM01211 C4901_03770 C4901_03780 SM00100 Cyclic nucleotide-monophosphate binding domain C4901_03780 SM00419 helix_turn_helix, cAMP Regulatory protein C4901_03815 SM00382 ATPases associated with a variety of cellular activities C4901_03820 SM00382 ATPases associated with a variety of cellular activities C4901_03850 SM00861 Transketolase, pyrimidine binding domain C4901_03865 SM00091 PAS domain C4901_03865 SM00387 Histidine kinase-like ATPases C4901_03865 SM00388 His Kinase A (phosphoacceptor) domain C4901_03885 SM00897 FIST N domain C4901_03885 SM01204 C4901_03885 C4901_03890 SM00478 endonuclease III C4901_03890 SM00525 C4901_03890 C4901_03970 SM00305 Hint (Hedgehog/Intein) domain C-terminal region C4901_03970 SM00306 Hint (Hedgehog/Intein) domain N-terminal region C4901_04030 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C4901_04030 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C4901_04045 SM00507 HNH nucleases C4901_04100 SM00382 ATPases associated with a variety of cellular activities C4901_04150 SM00267 diguanylate cyclase C4901_04150 SM00448 cheY-homologous receiver domain C4901_04165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C4901_04170 SM00849 Metallo-beta-lactamase superfamily C4901_04185 SM00841 Elongation factor P, C-terminal C4901_04185 SM01185 C4901_04185 C4901_04295 SM00347 helix_turn_helix multiple antibiotic resistance protein C4901_04305 SM00861 Transketolase, pyrimidine binding domain C4901_04410 SM00829 Enoylreductase C4901_04485 SM00271 DnaJ molecular chaperone homology domain C4901_04500 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain C4901_04505 SM00851 MGS-like domain C4901_04505 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C4901_04525 SM00382 ATPases associated with a variety of cellular activities C4901_04580 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C4901_04585 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C4901_04660 SM00316 Ribosomal protein S1-like RNA-binding domain C4901_04660 SM00322 K homology RNA-binding domain C4901_04680 SM01387 C4901_04680 C4901_04685 SM00316 Ribosomal protein S1-like RNA-binding domain C4901_04685 SM00322 K homology RNA-binding domain C4901_04835 SM00450 Rhodanese Homology Domain C4901_04850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C4901_04850 SM00387 Histidine kinase-like ATPases C4901_04850 SM00388 His Kinase A (phosphoacceptor) domain C4901_04855 SM00382 ATPases associated with a variety of cellular activities C4901_04855 SM00448 cheY-homologous receiver domain C4901_04860 SM00052 Putative diguanylate phosphodiesterase C4901_04860 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_04860 SM00091 PAS domain C4901_04860 SM00267 diguanylate cyclase C4901_04910 SM00530 Helix-turn-helix XRE-family like proteins C4901_04935 SM00829 Enoylreductase C4901_04960 SM00382 ATPases associated with a variety of cellular activities C4901_05035 SM00670 Large family of predicted nucleotide-binding domains C4901_05095 SM00382 ATPases associated with a variety of cellular activities C4901_05095 SM00448 cheY-homologous receiver domain C4901_05100 SM00387 Histidine kinase-like ATPases C4901_05100 SM00388 His Kinase A (phosphoacceptor) domain C4901_05135 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase C4901_05155 SM00904 Riboflavin kinase C4901_05230 SM00387 Histidine kinase-like ATPases C4901_05230 SM00448 cheY-homologous receiver domain C4901_05250 SM00382 ATPases associated with a variety of cellular activities C4901_05285 SM00244 prohibitin homologues C4901_05295 SM00052 Putative diguanylate phosphodiesterase C4901_05295 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_05295 SM00267 diguanylate cyclase C4901_05325 SM00849 Metallo-beta-lactamase superfamily C4901_05390 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_05515 SM00710 Parallel beta-helix repeats C4901_05545 SM00487 DEAD-like helicases superfamily C4901_05545 SM00490 helicase superfamily c-terminal domain C4901_05565 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C4901_05590 SM00873 B3/4 domain C4901_05590 SM00874 tRNA synthetase B5 domain C4901_05590 SM00896 Ferredoxin-fold anticodon binding domain C4901_05595 SM00411 bacterial (prokaryotic) histone like domain C4901_05600 SM00422 helix_turn_helix, mercury resistance C4901_05605 SM00450 Rhodanese Homology Domain C4901_05625 SM00822 C4901_05625 C4901_05640 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_05640 SM00091 PAS domain C4901_05640 SM00387 Histidine kinase-like ATPases C4901_05640 SM00448 cheY-homologous receiver domain C4901_05645 SM00138 Methyltransferase, chemotaxis proteins C4901_05690 SM00052 Putative diguanylate phosphodiesterase C4901_05755 SM00052 Putative diguanylate phosphodiesterase C4901_05755 SM00091 PAS domain C4901_05755 SM00267 diguanylate cyclase C4901_05760 SM00387 Histidine kinase-like ATPases C4901_05785 SM00382 ATPases associated with a variety of cellular activities C4901_05785 SM00994 ClpX C4-type zinc finger C4901_05785 SM01086 C-terminal, D2-small domain, of ClpB protein C4901_05790 SM00382 ATPases associated with a variety of cellular activities C4901_05790 SM00464 Found in ATP-dependent protease La (LON) C4901_05825 SM00257 Lysin motif C4901_05830 SM00849 Metallo-beta-lactamase superfamily C4901_05845 SM00479 C4901_05845 C4901_05860 SM00052 Putative diguanylate phosphodiesterase C4901_05860 SM00267 diguanylate cyclase C4901_05920 SM01350 C4901_05920 C4901_05970 SM00382 ATPases associated with a variety of cellular activities C4901_05980 SM00642 Alpha-amylase domain C4901_06035 SM00642 Alpha-amylase domain C4901_06045 SM00642 Alpha-amylase domain C4901_06055 SM00642 Alpha-amylase domain C4901_06060 SM00642 Alpha-amylase domain C4901_06065 SM00642 Alpha-amylase domain C4901_06155 SM00564 beta-propeller repeat C4901_06225 SM00421 helix_turn_helix, Lux Regulon C4901_06225 SM00448 cheY-homologous receiver domain C4901_06230 SM00387 Histidine kinase-like ATPases C4901_06230 SM00388 His Kinase A (phosphoacceptor) domain C4901_06240 SM00834 Putative regulatory protein C4901_06295 SM00267 diguanylate cyclase C4901_06410 SM00220 Serine/Threonine protein kinases, catalytic domain C4901_06410 SM00331 Sigma factor PP2C-like phosphatases C4901_06410 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C4901_06435 SM01230 C4901_06435 C4901_06460 SM00530 Helix-turn-helix XRE-family like proteins C4901_06660 SM00382 ATPases associated with a variety of cellular activities C4901_06835 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_06835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C4901_06835 SM00387 Histidine kinase-like ATPases C4901_06840 SM00421 helix_turn_helix, Lux Regulon C4901_06840 SM00448 cheY-homologous receiver domain C4901_06905 SM00470 ParB-like nuclease domain C4901_06970 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_06970 SM00091 PAS domain C4901_06970 SM00387 Histidine kinase-like ATPases C4901_06970 SM00388 His Kinase A (phosphoacceptor) domain C4901_06970 SM00448 cheY-homologous receiver domain C4901_06970 SM01079 C4901_06970 C4901_06990 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_06990 SM00091 PAS domain C4901_06990 SM00387 Histidine kinase-like ATPases C4901_06990 SM00448 cheY-homologous receiver domain C4901_07000 SM00357 Cold shock protein domain C4901_07030 SM00487 DEAD-like helicases superfamily C4901_07030 SM00490 helicase superfamily c-terminal domain C4901_07045 SM00267 diguanylate cyclase C4901_07080 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C4901_07100 SM00358 Double-stranded RNA binding motif C4901_07100 SM00535 Ribonuclease III family C4901_07160 SM01209 C4901_07160 C4901_07220 SM00382 ATPases associated with a variety of cellular activities C4901_07245 SM00382 ATPases associated with a variety of cellular activities C4901_07260 SM00796 Allophanate hydrolase subunit 1 C4901_07260 SM00797 Allophanate hydrolase subunit 2 C4901_07260 SM00878 Biotin carboxylase C-terminal domain C4901_07445 SM00382 ATPases associated with a variety of cellular activities C4901_07465 SM00382 ATPases associated with a variety of cellular activities C4901_07480 SM00530 Helix-turn-helix XRE-family like proteins C4901_07540 SM00382 ATPases associated with a variety of cellular activities C4901_07715 SM00382 ATPases associated with a variety of cellular activities C4901_07755 SM00825 Beta-ketoacyl synthase C4901_07770 SM00829 Enoylreductase C4901_07775 SM00421 helix_turn_helix, Lux Regulon C4901_07840 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C4901_07850 SM00052 Putative diguanylate phosphodiesterase C4901_07850 SM00267 diguanylate cyclase C4901_07865 SM00644 C4901_07865 C4901_07915 SM00831 Cation transporter/ATPase, N-terminus C4901_07935 SM00052 Putative diguanylate phosphodiesterase C4901_07935 SM00267 diguanylate cyclase C4901_07955 SM00771 ZipA, C-terminal domain (FtsZ-binding) C4901_07960 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C4901_07960 SM00292 breast cancer carboxy-terminal domain C4901_07960 SM00532 Ligase N family C4901_07985 SM00481 DNA polymerase alpha chain like domain C4901_08015 SM00363 S4 RNA-binding domain C4901_08020 SM00478 endonuclease III C4901_08065 SM00052 Putative diguanylate phosphodiesterase C4901_08065 SM00267 diguanylate cyclase C4901_08110 SM00357 Cold shock protein domain C4901_08120 SM00966 SpoVT / AbrB like domain C4901_08205 SM00363 S4 RNA-binding domain C4901_08215 SM00704 CDGSH-type zinc finger. Function unknown. C4901_08225 SM00155 Phospholipase D. Active site motifs. C4901_08250 SM00986 Uracil DNA glycosylase superfamily C4901_08250 SM00987 UreE urease accessory protein, C-terminal domain C4901_08270 SM01329 C4901_08270 C4901_08290 SM00357 Cold shock protein domain C4901_08300 SM00382 ATPases associated with a variety of cellular activities C4901_08300 SM01086 C-terminal, D2-small domain, of ClpB protein C4901_08310 SM00316 Ribosomal protein S1-like RNA-binding domain C4901_08345 SM00881 CoA binding domain C4901_08410 SM00382 ATPases associated with a variety of cellular activities C4901_08410 SM01086 C-terminal, D2-small domain, of ClpB protein C4901_08450 SM01329 C4901_08450 C4901_08455 SM00859 Semialdehyde dehydrogenase, NAD binding domain C4901_08475 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain C4901_08545 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C4901_08595 SM00052 Putative diguanylate phosphodiesterase C4901_08595 SM00267 diguanylate cyclase C4901_08665 SM00244 prohibitin homologues C4901_08670 SM00244 prohibitin homologues C4901_08680 SM00788 Adenylosuccinate synthetase C4901_08690 SM00316 Ribosomal protein S1-like RNA-binding domain C4901_08690 SM00357 Cold shock protein domain C4901_08690 SM00955 C4901_08690 C4901_08695 SM00967 RNA 2'-O ribose methyltransferase substrate binding C4901_08715 SM00382 ATPases associated with a variety of cellular activities C4901_08720 SM01005 Alanine racemase, C-terminal domain C4901_08725 SM00382 ATPases associated with a variety of cellular activities C4901_08730 SM00052 Putative diguanylate phosphodiesterase C4901_08730 SM00267 diguanylate cyclase C4901_08750 SM00822 C4901_08750 C4901_08770 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain C4901_08800 SM00878 Biotin carboxylase C-terminal domain C4901_08805 SM00857 Resolvase, N terminal domain C4901_08830 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. C4901_08835 SM00822 C4901_08835 C4901_08845 SM00825 Beta-ketoacyl synthase C4901_08920 SM00382 ATPases associated with a variety of cellular activities C4901_08930 SM00226 Low molecular weight phosphatase family C4901_08930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C4901_09005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4901_09020 SM00710 Parallel beta-helix repeats C4901_09090 SM01126 C4901_09090 C4901_09190 SM00487 DEAD-like helicases superfamily C4901_09390 SM00382 ATPases associated with a variety of cellular activities C4901_09410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C4901_09410 SM00465 GIY-YIG type nucleases (URI domain) C4901_09415 SM00986 Uracil DNA glycosylase superfamily C4901_09415 SM00987 UreE urease accessory protein, C-terminal domain C4901_09480 SM00257 Lysin motif C4901_09525 SM00226 Low molecular weight phosphatase family C4901_09530 SM00226 Low molecular weight phosphatase family C4901_09560 SM00382 ATPases associated with a variety of cellular activities C4901_09575 SM00382 ATPases associated with a variety of cellular activities C4901_09615 SM00240 Forkhead associated domain C4901_09625 SM00563 Phosphate acyltransferases C4901_09630 SM00448 cheY-homologous receiver domain C4901_09630 SM00862 Transcriptional regulatory protein, C terminal C4901_09635 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C4901_09635 SM00387 Histidine kinase-like ATPases C4901_09635 SM00388 His Kinase A (phosphoacceptor) domain C4901_09660 SM01321 C4901_09660 C4901_09680 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C4901_09700 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_09715 SM00382 ATPases associated with a variety of cellular activities C4901_09760 SM00382 ATPases associated with a variety of cellular activities C4901_09905 SM00422 helix_turn_helix, mercury resistance C4901_09955 SM00763 PrkA AAA domain C4901_10025 SM00877 C4901_10025 C4901_10055 SM00327 von Willebrand factor (vWF) type A domain C4901_10080 SM00877 C4901_10080 C4901_10085 SM00877 C4901_10085 C4901_10090 SM00877 C4901_10090 C4901_10115 SM00961 Ribulose bisphosphate carboxylase, small chain C4901_10130 SM00564 beta-propeller repeat C4901_10195 SM01321 C4901_10195 C4901_10265 SM00090 RIO-like kinase C4901_10285 SM00748 Higher Eukarytoes and Prokaryotes Nucleotide-binding domain C4901_10340 SM01192 C4901_10340 C4901_10340 SM01193 C4901_10340 C4901_10355 SM00977 TilS substrate C-terminal domain C4901_10365 SM00481 DNA polymerase alpha chain like domain C4901_10400 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. C4901_10445 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4901_10485 SM00470 ParB-like nuclease domain C4901_10515 SM00257 Lysin motif C4901_10515 SM00646 C4901_10515 C4901_10535 SM00479 C4901_10535 C4901_10545 SM00493 C4901_10545 C4901_10580 SM00749 bacterial OsmY and nodulation domain C4901_10610 SM00421 helix_turn_helix, Lux Regulon C4901_10625 SM00448 cheY-homologous receiver domain C4901_10630 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_10630 SM00267 diguanylate cyclase C4901_10635 SM00387 Histidine kinase-like ATPases C4901_10635 SM00388 His Kinase A (phosphoacceptor) domain C4901_10635 SM00448 cheY-homologous receiver domain C4901_10640 SM00387 Histidine kinase-like ATPases C4901_10650 SM00062 Bacterial periplasmic substrate-binding proteins C4901_10770 SM00116 Domain in cystathionine beta-synthase and other proteins. C4901_10770 SM01240 C4901_10770 C4901_10785 SM00382 ATPases associated with a variety of cellular activities C4901_10790 SM00564 beta-propeller repeat C4901_10810 SM00530 Helix-turn-helix XRE-family like proteins C4901_10815 SM00028 Tetratricopeptide repeats C4901_10820 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_10825 SM00562 C4901_10825 C4901_10845 SM00271 DnaJ molecular chaperone homology domain C4901_10900 SM00382 ATPases associated with a variety of cellular activities C4901_10900 SM00962 SRP54-type protein, GTPase domain C4901_10900 SM00963 SRP54-type protein, helical bundle domain C4901_10910 SM01091 Transporter associated domain C4901_10915 SM00533 DNA-binding domain of DNA mismatch repair MUTS family C4901_10915 SM00534 ATPase domain of DNA mismatch repair MUTS family C4901_10940 SM00564 beta-propeller repeat C4901_10945 SM00382 ATPases associated with a variety of cellular activities C4901_10975 SM00974 C4901_10975 C4901_11020 SM00382 ATPases associated with a variety of cellular activities C4901_11030 SM00382 ATPases associated with a variety of cellular activities C4901_11050 SM00530 Helix-turn-helix XRE-family like proteins C4901_11250 SM00671 Sel1-like repeats. C4901_11285 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain C4901_11295 SM00382 ATPases associated with a variety of cellular activities C4901_11380 SM01323 C4901_11380 C4901_11390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_11390 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_11390 SM00091 PAS domain C4901_11390 SM00387 Histidine kinase-like ATPases C4901_11390 SM00388 His Kinase A (phosphoacceptor) domain C4901_11390 SM00448 cheY-homologous receiver domain C4901_11460 SM00974 C4901_11460 C4901_11540 SM00382 ATPases associated with a variety of cellular activities C4901_11630 SM00267 diguanylate cyclase C4901_11635 SM00052 Putative diguanylate phosphodiesterase C4901_11705 SM00387 Histidine kinase-like ATPases C4901_11760 SM00984 UDP binding domain C4901_11840 SM00382 ATPases associated with a variety of cellular activities C4901_11875 SM00382 ATPases associated with a variety of cellular activities C4901_11885 SM00382 ATPases associated with a variety of cellular activities C4901_11885 SM00843 C4901_11885 C4901_11890 SM01002 Alanine dehydrogenase/PNT, C-terminal domain C4901_11890 SM01003 Alanine dehydrogenase/PNT, N-terminal domain C4901_11900 SM00463 Small MutS-related domain C4901_11915 SM01058 CarD-like/TRCF domain C4901_11920 SM00487 DEAD-like helicases superfamily C4901_11920 SM00490 helicase superfamily c-terminal domain C4901_11920 SM00982 C4901_11920 C4901_11920 SM01058 CarD-like/TRCF domain C4901_11965 SM00822 C4901_11965 C4901_11990 SM00327 von Willebrand factor (vWF) type A domain C4901_12015 SM00382 ATPases associated with a variety of cellular activities C4901_12035 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family C4901_12040 SM00028 Tetratricopeptide repeats C4901_12050 SM00411 bacterial (prokaryotic) histone like domain C4901_12055 SM00316 Ribosomal protein S1-like RNA-binding domain C4901_12080 SM00830 Chorismate mutase type II C4901_12095 SM00434 DNA Topoisomerase IV C4901_12175 SM01321 C4901_12175 C4901_12190 SM00382 ATPases associated with a variety of cellular activities C4901_12190 SM00448 cheY-homologous receiver domain C4901_12285 SM00091 PAS domain C4901_12285 SM00387 Histidine kinase-like ATPases C4901_12310 SM00052 Putative diguanylate phosphodiesterase C4901_12330 SM00829 Enoylreductase C4901_12400 SM00961 Ribulose bisphosphate carboxylase, small chain C4901_12445 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4901_12465 SM00422 helix_turn_helix, mercury resistance C4901_12500 SM00382 ATPases associated with a variety of cellular activities C4901_12575 SM00986 Uracil DNA glycosylase superfamily C4901_12575 SM00987 UreE urease accessory protein, C-terminal domain C4901_12600 SM00450 Rhodanese Homology Domain C4901_12645 SM00421 helix_turn_helix, Lux Regulon C4901_12650 SM00481 DNA polymerase alpha chain like domain C4901_12670 SM00829 Enoylreductase C4901_12685 SM00966 SpoVT / AbrB like domain C4901_12690 SM00917 LeuA allosteric (dimerisation) domain C4901_12750 SM00840 C4901_12750 C4901_12840 SM00382 ATPases associated with a variety of cellular activities C4901_12855 SM00966 SpoVT / AbrB like domain C4901_12920 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_12935 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_12995 SM00450 Rhodanese Homology Domain C4901_13040 SM00052 Putative diguanylate phosphodiesterase C4901_13040 SM00267 diguanylate cyclase C4901_13080 SM00382 ATPases associated with a variety of cellular activities C4901_13085 SM00091 PAS domain C4901_13085 SM00387 Histidine kinase-like ATPases C4901_13085 SM00388 His Kinase A (phosphoacceptor) domain C4901_13240 SM00387 Histidine kinase-like ATPases C4901_13270 SM01007 Class II Aldolase and Adducin N-terminal domain C4901_13275 SM00267 diguanylate cyclase C4901_13315 SM00345 helix_turn_helix gluconate operon transcriptional repressor C4901_13315 SM00895 C4901_13315 C4901_13340 SM01092 CO dehydrogenase flavoprotein C-terminal domain C4901_13350 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C4901_13415 SM01133 C4901_13415 C4901_13460 SM00052 Putative diguanylate phosphodiesterase C4901_13460 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_13460 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_13460 SM00091 PAS domain C4901_13460 SM00267 diguanylate cyclase C4901_13470 SM00052 Putative diguanylate phosphodiesterase C4901_13470 SM00091 PAS domain C4901_13470 SM00267 diguanylate cyclase C4901_13470 SM00448 cheY-homologous receiver domain C4901_13475 SM00448 cheY-homologous receiver domain C4901_13480 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_13480 SM00091 PAS domain C4901_13480 SM00387 Histidine kinase-like ATPases C4901_13480 SM00388 His Kinase A (phosphoacceptor) domain C4901_13810 SM00382 ATPases associated with a variety of cellular activities C4901_13815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 C4901_13850 SM00834 Putative regulatory protein C4901_13855 SM00411 bacterial (prokaryotic) histone like domain C4901_13870 SM00116 Domain in cystathionine beta-synthase and other proteins. C4901_13900 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_13900 SM00091 PAS domain C4901_13900 SM00387 Histidine kinase-like ATPases C4901_13900 SM00388 His Kinase A (phosphoacceptor) domain C4901_13900 SM00448 cheY-homologous receiver domain C4901_13925 SM00917 LeuA allosteric (dimerisation) domain C4901_14000 SM00662 RNA polymerases D C4901_14005 SM00363 S4 RNA-binding domain C4901_14005 SM01390 C4901_14005 C4901_14070 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C4901_14075 SM01374 C4901_14075 C4901_14095 SM00322 K homology RNA-binding domain C4901_14110 SM01382 C4901_14110 C4901_14110 SM01383 C4901_14110 C4901_14130 SM01403 C4901_14130 C4901_14140 SM00838 Elongation factor G C-terminus C4901_14140 SM00889 Elongation factor G, domain IV C4901_14155 SM00663 RNA polymerase I subunit A N-terminus C4901_14180 SM00649 Ribosomal protein L11/L12 C4901_14185 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. C4901_14185 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. C4901_14310 SM00859 Semialdehyde dehydrogenase, NAD binding domain C4901_14320 SM00052 Putative diguanylate phosphodiesterase C4901_14320 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_14320 SM00267 diguanylate cyclase C4901_14440 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_14475 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C4901_14480 SM00861 Transketolase, pyrimidine binding domain C4901_14505 SM00260 Two component signalling adaptor domain C4901_14515 SM00073 Histidine Phosphotransfer domain C4901_14515 SM00260 Two component signalling adaptor domain C4901_14515 SM00387 Histidine kinase-like ATPases C4901_14515 SM00448 cheY-homologous receiver domain C4901_14515 SM01231 C4901_14515 C4901_14520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). C4901_14525 SM00260 Two component signalling adaptor domain C4901_14530 SM00448 cheY-homologous receiver domain C4901_14535 SM00448 cheY-homologous receiver domain C4901_14560 SM00732 Likely ribonuclease with RNase H fold. C4901_14595 SM00382 ATPases associated with a variety of cellular activities C4901_14600 SM00382 ATPases associated with a variety of cellular activities C4901_14690 SM00052 Putative diguanylate phosphodiesterase C4901_14690 SM00091 PAS domain C4901_14690 SM00267 diguanylate cyclase C4901_14815 SM00052 Putative diguanylate phosphodiesterase C4901_14815 SM00267 diguanylate cyclase C4901_14830 SM00893 Electron transfer flavoprotein domain C4901_14860 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_14860 SM00382 ATPases associated with a variety of cellular activities C4901_14880 SM00052 Putative diguanylate phosphodiesterase C4901_14880 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) C4901_14880 SM00091 PAS domain C4901_14880 SM00267 diguanylate cyclase C4901_14915 SM00382 ATPases associated with a variety of cellular activities C4901_14930 SM01001 AIR carboxylase C4901_14935 SM00487 DEAD-like helicases superfamily C4901_14935 SM00490 helicase superfamily c-terminal domain C4901_14975 SM00886 Stress responsive A/B Barrel Domain C4901_15000 SM00960 Roadblock/LC7 domain C4901_15010 SM00052 Putative diguanylate phosphodiesterase C4901_15010 SM00267 diguanylate cyclase C4901_15075 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_15140 SM01321 C4901_15140 C4901_15185 SM00487 DEAD-like helicases superfamily C4901_15305 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain C4901_15305 SM00437 Bacterial DNA topoisomerase I DNA-binding domain C4901_15305 SM00493 C4901_15305 C4901_15440 SM00530 Helix-turn-helix XRE-family like proteins C4901_15490 SM00052 Putative diguanylate phosphodiesterase C4901_15615 SM00052 Putative diguanylate phosphodiesterase C4901_15620 SM01043 Bacterial transcriptional activator domain C4901_15630 SM00530 Helix-turn-helix XRE-family like proteins C4901_15655 SM00382 ATPases associated with a variety of cellular activities C4901_15660 SM00382 ATPases associated with a variety of cellular activities C4901_15670 SM00479 C4901_15670 C4901_15680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor C4901_15685 SM00953 C4901_15685 C4901_15765 SM00400 zinc finger C4901_15765 SM00493 C4901_15765 C4901_15765 SM00766 DNA primase DnaG DnaB-binding C4901_15785 SM01207 C4901_15785 C4901_15790 SM00905 Dihydroneopterin aldolase C4901_15835 SM00327 von Willebrand factor (vWF) type A domain C4901_15855 SM00360 RNA recognition motif C4901_15890 SM00450 Rhodanese Homology Domain C4901_15940 SM00382 ATPases associated with a variety of cellular activities C4901_16055 SM00966 SpoVT / AbrB like domain C4901_16065 SM00487 DEAD-like helicases superfamily C4901_16065 SM00490 helicase superfamily c-terminal domain C4901_16075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4901_16075 SM00954 Region found in RelA / SpoT proteins C4901_16080 SM01409 C4901_16080 C4901_16085 SM00072 Guanylate kinase homologues. C4901_16090 SM00220 Serine/Threonine protein kinases, catalytic domain C4901_16095 SM00331 Sigma factor PP2C-like phosphatases C4901_16095 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain C4901_16110 SM00729 Elongator protein 3, MiaB family, Radical SAM C4901_16135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. C4901_16195 SM00988 UreE urease accessory protein, N-terminal domain C4901_16265 SM00487 DEAD-like helicases superfamily C4901_16265 SM00490 helicase superfamily c-terminal domain C4901_16295 SM00965 Secretin and TonB N terminus short domain C4901_16335 SM00842 Cell division protein FtsA C4901_16350 SM00836 DALR anticodon binding domain C4901_16350 SM01016 Arginyl tRNA synthetase N terminal dom C4901_16360 SM00450 Rhodanese Homology Domain C4901_16365 SM01116 C4901_16365 C4901_16370 SM00382 ATPases associated with a variety of cellular activities C4901_16385 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. C4901_16385 SM00382 ATPases associated with a variety of cellular activities C4901_16415 SM00306 Hint (Hedgehog/Intein) domain N-terminal region C4901_16450 SM00244 prohibitin homologues C4901_16460 SM00966 SpoVT / AbrB like domain C4901_16485 SM00867 YceI-like domain C4901_16490 SM00347 helix_turn_helix multiple antibiotic resistance protein C4901_16535 SM00382 ATPases associated with a variety of cellular activities C4901_16540 SM00852 Probable molybdopterin binding domain C4901_16545 SM00852 Probable molybdopterin binding domain C4901_16560 SM00926 Molybdopterin oxidoreductase Fe4S4 domain C4901_16580 SM00450 Rhodanese Homology Domain C4901_16600 SM00938 Nitrogen regulatory protein P-II C4901_16650 SM00530 Helix-turn-helix XRE-family like proteins C4901_16725 SM00052 Putative diguanylate phosphodiesterase C4901_16725 SM00267 diguanylate cyclase C4901_16725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain C4901_16745 SM00861 Transketolase, pyrimidine binding domain C4901_16765 SM00919 Malic enzyme, NAD binding domain C4901_16765 SM01274 C4901_16765 C4901_16775 SM00342 helix_turn_helix, arabinose operon control protein C4901_16780 SM00903 Flavin reductase like domain C4901_16865 SM00100 Cyclic nucleotide-monophosphate binding domain C4901_16880 SM00341 Helicase and RNase D C-terminal C4901_16880 SM00474 3'-5' exonuclease C4901_16905 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs C4901_16905 SM00475 5'-3' exonuclease C4901_16905 SM00482 DNA polymerase A domain C4901_16925 SM00267 diguanylate cyclase C4901_16955 SM00966 SpoVT / AbrB like domain C4901_16995 SM00382 ATPases associated with a variety of cellular activities C4901_17040 SM00470 ParB-like nuclease domain C4901_17055 SM01228 C4901_17055 C4901_17100 SM00460 Transglutaminase/protease-like homologues C4901_17120 SM01234 C4901_17120