C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 SUPERFAMILY SSF47807 173 286 3.74E-32 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 SUPERFAMILY SSF56672 480 886 1.22E-153 T 14-10-2018 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 SMART SM00475 6 263 1.1E-119 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Pfam PF00476 DNA polymerase family A 509 884 1.9E-151 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 TIGRFAM TIGR00593 pola: DNA polymerase I 11 886 4.1E-271 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 11 172 1.6E-49 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 SMART SM00482 644 850 1.1E-113 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Pfam PF01612 3'-5' exonuclease 321 440 2.1E-4 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 SUPERFAMILY SSF88723 10 172 4.21E-51 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 173 267 7.8E-27 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Gene3D G3DSA:3.30.420.10 299 499 2.4E-29 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 SUPERFAMILY SSF53098 314 475 2.12E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Gene3D G3DSA:1.20.1060.10 501 616 7.4E-39 T 14-10-2018 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Gene3D G3DSA:1.10.150.20 667 810 5.7E-111 T 14-10-2018 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 771 782 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 833 846 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 749 760 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 658 681 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 636 651 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 712 737 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 613 635 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 688 701 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 803 819 7.3E-80 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 ProSitePatterns PS00447 DNA polymerase family A signature. 712 731 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Gene3D G3DSA:3.30.70.370 622 882 5.7E-111 T 14-10-2018 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Gene3D G3DSA:1.10.150.20 176 248 1.5E-91 T 14-10-2018 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 Gene3D G3DSA:3.40.50.1010 11 279 1.5E-91 T 14-10-2018 C4901_16905 978657d38c92a8a0e2d8db4e3c1d901b 886 SMART SM00279 175 210 1.3E-10 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 C4901_13515 1dc1c01f50a557dfc74a36ff19f98391 297 Pfam PF14236 Domain of unknown function (DUF4338) 65 294 6.3E-61 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_13675 1dc1c01f50a557dfc74a36ff19f98391 297 Pfam PF14236 Domain of unknown function (DUF4338) 65 294 6.3E-61 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_12135 1dc1c01f50a557dfc74a36ff19f98391 297 Pfam PF14236 Domain of unknown function (DUF4338) 65 294 6.3E-61 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_16780 eb19b83f2dd2a901337678d123f88b79 220 Gene3D G3DSA:2.30.110.10 8 203 5.9E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 C4901_16780 eb19b83f2dd2a901337678d123f88b79 220 Pfam PF01613 Flavin reductase like domain 12 164 1.4E-11 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 C4901_16780 eb19b83f2dd2a901337678d123f88b79 220 SUPERFAMILY SSF50475 7 197 1.87E-32 T 14-10-2018 C4901_16780 eb19b83f2dd2a901337678d123f88b79 220 SMART SM00903 9 174 0.0053 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 525 630 6.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SMART SM00086 363 405 0.32 T 14-10-2018 IPR001610 PAC motif C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SMART SM00086 234 277 1.5E-7 T 14-10-2018 IPR001610 PAC motif C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SUPERFAMILY SSF47384 414 484 2.35E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Gene3D G3DSA:3.30.450.20 148 287 2.5E-20 T 14-10-2018 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Gene3D G3DSA:3.30.450.20 288 416 5.2E-26 T 14-10-2018 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Gene3D G3DSA:1.10.287.130 417 483 2.1E-15 T 14-10-2018 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SUPERFAMILY SSF55785 274 403 8.05E-22 T 14-10-2018 IPR035965 PAS domain superfamily C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SMART SM00388 420 486 2.1E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 591 601 6.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 587 6.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 620 6.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Gene3D G3DSA:3.40.50.2300 2 143 1.3E-33 T 14-10-2018 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SUPERFAMILY SSF52172 6 142 2.13E-35 T 14-10-2018 IPR011006 CheY-like superfamily C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SMART SM00448 7 121 2.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SUPERFAMILY SSF55874 493 632 2.49E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 286 411 3.3E-16 T 14-10-2018 IPR000014 PAS domain C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 284 3.1E-11 T 14-10-2018 IPR000014 PAS domain C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SMART SM00091 289 355 1.5E-11 T 14-10-2018 IPR000014 PAS domain C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SMART SM00091 162 228 2.1E-6 T 14-10-2018 IPR000014 PAS domain C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Pfam PF00072 Response regulator receiver domain 9 121 5.6E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Gene3D G3DSA:3.30.565.10 488 638 5.9E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SUPERFAMILY SSF55785 167 279 9.99E-20 T 14-10-2018 IPR035965 PAS domain superfamily C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 422 485 5.0E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 SMART SM00387 524 642 2.0E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Pfam PF08448 PAS fold 295 406 9.8E-15 T 14-10-2018 IPR013656 PAS fold-4 C4901_03745 1d488ffe77bdbccaca39e84ffcc22f92 646 Pfam PF08448 PAS fold 170 279 8.9E-13 T 14-10-2018 IPR013656 PAS fold-4 C4901_14175 f5575f6ff660709004bd706ee5ea26cb 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.172 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 C4901_14175 f5575f6ff660709004bd706ee5ea26cb 231 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 4.2E-51 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein C4901_14175 f5575f6ff660709004bd706ee5ea26cb 231 SUPERFAMILY SSF56808 6 225 6.41E-80 T 14-10-2018 IPR023674 Ribosomal protein L1-like C4901_14175 f5575f6ff660709004bd706ee5ea26cb 231 Gene3D G3DSA:3.30.190.20 21 225 3.2E-81 T 14-10-2018 C4901_14175 f5575f6ff660709004bd706ee5ea26cb 231 PIRSF PIRSF002155 2 227 1.8E-75 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14175 f5575f6ff660709004bd706ee5ea26cb 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14175 f5575f6ff660709004bd706ee5ea26cb 231 Gene3D G3DSA:3.40.50.790 68 159 3.2E-81 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich C4901_14175 f5575f6ff660709004bd706ee5ea26cb 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 4.0E-102 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 Gene3D G3DSA:2.60.40.1400 96 254 3.8E-51 T 14-10-2018 IPR013518 Potassium channel, inwardly rectifying, Kir, cytoplasmic C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 Gene3D G3DSA:1.10.287.70 1 95 7.5E-29 T 14-10-2018 C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 SUPERFAMILY SSF81324 3 105 1.7E-18 T 14-10-2018 C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 Pfam PF01007 Inward rectifier potassium channel 38 251 1.6E-40 T 14-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 SUPERFAMILY SSF81296 75 251 5.6E-57 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 194 214 6.1E-13 T 14-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 215 232 6.1E-13 T 14-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 240 254 6.1E-13 T 14-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 43 65 6.1E-13 T 14-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 C4901_10565 7249c256fdffa09f2a36d168d022fcfa 261 PRINTS PR01320 Inward rectifier K+ channel superfamily signature 163 181 6.1E-13 T 14-10-2018 IPR016449 Potassium channel, inwardly rectifying, Kir GO:0005242|GO:0006813|GO:0016021 C4901_03010 d0f278c33be90948a8c1f2e202ff8b12 178 PIRSF PIRSF006118 1 168 2.5E-65 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C4901_03010 d0f278c33be90948a8c1f2e202ff8b12 178 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 7 159 6.1E-50 T 14-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C4901_03010 d0f278c33be90948a8c1f2e202ff8b12 178 Pfam PF08282 haloacid dehalogenase-like hydrolase 82 145 3.8E-9 T 14-10-2018 C4901_03010 d0f278c33be90948a8c1f2e202ff8b12 178 Gene3D G3DSA:3.40.50.1000 3 167 5.0E-54 T 14-10-2018 IPR023214 HAD superfamily C4901_03010 d0f278c33be90948a8c1f2e202ff8b12 178 SUPERFAMILY SSF56784 5 162 4.94E-41 T 14-10-2018 IPR036412 HAD-like superfamily C4901_05265 edfe449b86a1258df1e93e4bb6d4be44 378 Pfam PF03747 ADP-ribosylglycohydrolase 7 326 1.9E-69 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 C4901_05265 edfe449b86a1258df1e93e4bb6d4be44 378 Gene3D G3DSA:1.10.4080.10 1 354 2.0E-68 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily C4901_05265 edfe449b86a1258df1e93e4bb6d4be44 378 SUPERFAMILY SSF101478 1 347 4.18E-59 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily C4901_12685 d6312682b73079da3c1c6cb7d50ec6f5 80 Gene3D G3DSA:2.10.260.10 3 41 1.8E-6 T 14-10-2018 C4901_12685 d6312682b73079da3c1c6cb7d50ec6f5 80 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 45 6.7E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_12685 d6312682b73079da3c1c6cb7d50ec6f5 80 SUPERFAMILY SSF89447 4 43 1.19E-8 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_12685 d6312682b73079da3c1c6cb7d50ec6f5 80 SMART SM00966 2 47 1.0E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_12685 d6312682b73079da3c1c6cb7d50ec6f5 80 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 43 1.7E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.0E-254 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 Pfam PF01380 SIS domain 291 418 2.1E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 Pfam PF01380 SIS domain 462 591 8.9E-28 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 SUPERFAMILY SSF53697 247 609 1.58E-111 T 14-10-2018 C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 Gene3D G3DSA:3.40.50.10490 249 608 1.7E-145 T 14-10-2018 C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 40.3 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 SUPERFAMILY SSF56235 2 234 2.57E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 Gene3D G3DSA:3.60.20.10 2 241 4.4E-75 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 Pfam PF13522 Glutamine amidotransferase domain 59 184 1.1E-19 T 14-10-2018 C4901_16975 2a9b5279888232b9f4b5fb381ed8eefa 609 Gene3D G3DSA:3.40.50.10490 447 594 1.7E-145 T 14-10-2018 C4901_07235 48f0998d4f2b685838d22ac211c79c67 326 Gene3D G3DSA:1.10.8.450 237 266 3.2E-37 T 14-10-2018 C4901_07235 48f0998d4f2b685838d22ac211c79c67 326 Gene3D G3DSA:3.40.190.10 40 236 3.2E-37 T 14-10-2018 C4901_07235 48f0998d4f2b685838d22ac211c79c67 326 Pfam PF09084 NMT1/THI5 like 40 246 3.4E-17 T 14-10-2018 IPR015168 SsuA/THI5-like C4901_07235 48f0998d4f2b685838d22ac211c79c67 326 SUPERFAMILY SSF53850 28 247 5.89E-37 T 14-10-2018 C4901_07235 48f0998d4f2b685838d22ac211c79c67 326 Gene3D G3DSA:3.40.190.10 107 204 3.2E-37 T 14-10-2018 C4901_09870 5f5746a38f97405d553f8bc98b4a8eb0 429 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 197 278 3.5E-13 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C4901_09870 5f5746a38f97405d553f8bc98b4a8eb0 429 Gene3D G3DSA:2.40.50.100 57 188 5.3E-8 T 14-10-2018 C4901_09870 5f5746a38f97405d553f8bc98b4a8eb0 429 Gene3D G3DSA:1.10.287.470 90 184 5.3E-8 T 14-10-2018 C4901_09870 5f5746a38f97405d553f8bc98b4a8eb0 429 SUPERFAMILY SSF111369 55 262 1.83E-9 T 14-10-2018 C4901_09870 5f5746a38f97405d553f8bc98b4a8eb0 429 Gene3D G3DSA:2.40.30.170 229 347 1.2E-28 T 14-10-2018 C4901_09870 5f5746a38f97405d553f8bc98b4a8eb0 429 Pfam PF00529 HlyD membrane-fusion protein of T1SS 31 342 5.3E-10 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 20 499 43.264 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 Gene3D G3DSA:2.40.50.140 15 150 1.3E-35 T 14-10-2018 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 Gene3D G3DSA:3.30.930.10 154 501 9.8E-128 T 14-10-2018 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 16 499 8.1E-190 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 Pfam PF01336 OB-fold nucleic acid binding domain 68 141 2.9E-15 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 2.2E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 2.2E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 2.2E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 2.2E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 2.2E-38 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 Pfam PF00152 tRNA synthetases class II (D, K and N) 158 496 7.9E-81 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 SUPERFAMILY SSF55681 158 497 4.59E-116 T 14-10-2018 C4901_10165 f278e83188b63111c3ec4a5add426c95 501 SUPERFAMILY SSF50249 13 151 2.36E-34 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_02250 1479cc1c814035b5fa931ab2da102a00 426 Gene3D G3DSA:1.20.1250.20 11 389 4.4E-33 T 14-10-2018 C4901_02250 1479cc1c814035b5fa931ab2da102a00 426 Pfam PF05977 Transmembrane secretion effector 16 388 3.4E-41 T 14-10-2018 IPR010290 Transmembrane secretion effector C4901_02250 1479cc1c814035b5fa931ab2da102a00 426 SUPERFAMILY SSF103473 15 394 9.42E-41 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_00230 7743a93072ba384e75010d939e635235 1012 Pfam PF00873 AcrB/AcrD/AcrF family 12 1006 6.3E-156 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_00230 7743a93072ba384e75010d939e635235 1012 Gene3D G3DSA:3.30.2090.10 703 790 8.4E-182 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_00230 7743a93072ba384e75010d939e635235 1012 SUPERFAMILY SSF82866 790 1009 4.71E-37 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 SUPERFAMILY SSF82714 180 264 2.35E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_00230 7743a93072ba384e75010d939e635235 1012 SUPERFAMILY SSF82693 41 122 1.49E-8 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 SUPERFAMILY SSF82693 135 324 3.4E-9 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 Gene3D G3DSA:3.30.70.1430 41 798 8.4E-182 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 SUPERFAMILY SSF82866 291 491 1.44E-34 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 Gene3D G3DSA:1.20.1640.10 12 501 8.4E-182 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 Gene3D G3DSA:3.30.70.1440 650 848 8.4E-182 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 Gene3D G3DSA:1.20.1640.10 502 1003 8.4E-182 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 Gene3D G3DSA:3.30.70.1320 132 326 8.4E-182 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 2.4E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_00230 7743a93072ba384e75010d939e635235 1012 PRINTS PR00702 Acriflavin resistance protein family signature 440 463 2.4E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_00230 7743a93072ba384e75010d939e635235 1012 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 2.4E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_00230 7743a93072ba384e75010d939e635235 1012 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 2.4E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_00230 7743a93072ba384e75010d939e635235 1012 PRINTS PR00702 Acriflavin resistance protein family signature 465 488 2.4E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_00230 7743a93072ba384e75010d939e635235 1012 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 2.4E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_00230 7743a93072ba384e75010d939e635235 1012 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.4E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_00230 7743a93072ba384e75010d939e635235 1012 SUPERFAMILY SSF82693 553 629 9.94E-5 T 14-10-2018 C4901_00230 7743a93072ba384e75010d939e635235 1012 Gene3D G3DSA:3.30.2090.10 176 268 8.4E-182 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_00230 7743a93072ba384e75010d939e635235 1012 Gene3D G3DSA:3.30.70.1430 554 649 8.4E-182 T 14-10-2018 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Pfam PF00072 Response regulator receiver domain 675 789 2.3E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Pfam PF08448 PAS fold 173 283 6.9E-11 T 14-10-2018 IPR013656 PAS fold-4 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 534 648 3.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SUPERFAMILY SSF52172 675 795 2.99E-21 T 14-10-2018 IPR011006 CheY-like superfamily C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SMART SM00091 294 359 1.7E-4 T 14-10-2018 IPR000014 PAS domain C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SMART SM00091 165 230 1.3E-7 T 14-10-2018 IPR000014 PAS domain C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SMART SM00387 533 650 2.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Pfam PF00989 PAS fold 299 410 5.6E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 292 420 4.1E-13 T 14-10-2018 IPR000014 PAS domain C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 162 289 4.8E-13 T 14-10-2018 IPR000014 PAS domain C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Gene3D G3DSA:3.30.450.20 162 297 2.2E-21 T 14-10-2018 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Gene3D G3DSA:3.40.50.2300 674 801 1.6E-21 T 14-10-2018 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SUPERFAMILY SSF47384 424 492 6.87E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Gene3D G3DSA:1.10.287.130 420 491 4.9E-14 T 14-10-2018 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SUPERFAMILY SSF55785 279 411 2.27E-20 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SMART SM00388 428 494 8.2E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Gene3D G3DSA:3.30.450.20 302 411 9.0E-25 T 14-10-2018 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SMART SM00448 673 790 1.2E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SUPERFAMILY SSF55874 508 647 2.75E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SUPERFAMILY SSF55785 158 280 1.15E-18 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 Gene3D G3DSA:3.30.565.10 496 653 2.1E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 7.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 582 596 7.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 610 7.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 629 7.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SMART SM00086 240 282 27.0 T 14-10-2018 IPR001610 PAC motif C4901_13900 b6d42e9e00a7f21b986fd16ac7f41ccb 801 SMART SM00086 371 413 6.1E-5 T 14-10-2018 IPR001610 PAC motif C4901_16210 66b952eafb9a90dd9358aeb6382cab75 100 Gene3D G3DSA:3.30.280.10 4 100 4.8E-46 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16210 66b952eafb9a90dd9358aeb6382cab75 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 8.3E-50 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16210 66b952eafb9a90dd9358aeb6382cab75 100 Pfam PF00547 Urease, gamma subunit 1 99 1.8E-46 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16210 66b952eafb9a90dd9358aeb6382cab75 100 SUPERFAMILY SSF54111 1 99 9.42E-46 T 14-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16210 66b952eafb9a90dd9358aeb6382cab75 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 1.0E-40 T 14-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16210 66b952eafb9a90dd9358aeb6382cab75 100 PIRSF PIRSF001223 1 100 1.0E-48 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16210 66b952eafb9a90dd9358aeb6382cab75 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.919 T 14-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16150 1df56e18c72328f22538470ea6206478 1072 Gene3D G3DSA:1.20.1640.10 528 1055 7.2E-230 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 Gene3D G3DSA:3.30.2090.10 744 834 7.2E-230 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16150 1df56e18c72328f22538470ea6206478 1072 SUPERFAMILY SSF82714 744 827 6.8E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16150 1df56e18c72328f22538470ea6206478 1072 SUPERFAMILY SSF82693 149 348 8.89E-9 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 SUPERFAMILY SSF82693 54 147 1.64E-16 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 SUPERFAMILY SSF82714 196 278 1.07E-12 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16150 1df56e18c72328f22538470ea6206478 1072 Gene3D G3DSA:3.30.70.1430 584 692 7.2E-230 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 SUPERFAMILY SSF82866 888 1055 1.03E-37 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 Gene3D G3DSA:3.30.70.1430 54 842 7.2E-230 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 Gene3D G3DSA:3.30.70.1440 693 906 7.2E-230 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 Gene3D G3DSA:3.30.2090.10 192 283 7.2E-230 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16150 1df56e18c72328f22538470ea6206478 1072 Gene3D G3DSA:3.30.70.1320 148 350 7.2E-230 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 Pfam PF00873 AcrB/AcrD/AcrF family 19 1056 4.1E-157 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16150 1df56e18c72328f22538470ea6206478 1072 Gene3D G3DSA:1.20.1640.10 27 527 7.2E-230 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 SUPERFAMILY SSF82866 315 516 2.22E-37 T 14-10-2018 C4901_16150 1df56e18c72328f22538470ea6206478 1072 PRINTS PR00702 Acriflavin resistance protein family signature 356 379 1.8E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16150 1df56e18c72328f22538470ea6206478 1072 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 1.8E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16150 1df56e18c72328f22538470ea6206478 1072 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 1.8E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16150 1df56e18c72328f22538470ea6206478 1072 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.8E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16150 1df56e18c72328f22538470ea6206478 1072 PRINTS PR00702 Acriflavin resistance protein family signature 410 434 1.8E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16150 1df56e18c72328f22538470ea6206478 1072 PRINTS PR00702 Acriflavin resistance protein family signature 489 512 1.8E-29 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_17045 ad2fdc1dfb106189f92c7fbdbdae5940 260 Gene3D G3DSA:3.40.50.300 1 252 8.1E-81 T 14-10-2018 C4901_17045 ad2fdc1dfb106189f92c7fbdbdae5940 260 PIRSF PIRSF009320 2 63 1.5E-15 T 14-10-2018 C4901_17045 ad2fdc1dfb106189f92c7fbdbdae5940 260 PIRSF PIRSF009320 84 251 1.1E-7 T 14-10-2018 C4901_17045 ad2fdc1dfb106189f92c7fbdbdae5940 260 SUPERFAMILY SSF52540 1 250 2.43E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_17045 ad2fdc1dfb106189f92c7fbdbdae5940 260 Pfam PF13614 AAA domain 2 175 5.9E-59 T 14-10-2018 IPR025669 AAA domain C4901_14345 011cbdd11c8bab2a214f90c5f5007cb6 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 C4901_14345 011cbdd11c8bab2a214f90c5f5007cb6 130 SUPERFAMILY SSF54211 6 130 1.56E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_14345 011cbdd11c8bab2a214f90c5f5007cb6 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 31.298 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid C4901_14345 011cbdd11c8bab2a214f90c5f5007cb6 130 Gene3D G3DSA:3.30.230.10 1 130 2.2E-51 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_14345 011cbdd11c8bab2a214f90c5f5007cb6 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 3.6E-45 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 C4901_05600 3c3a9761a9ecd2701a311c24133c5a26 122 Pfam PF13411 MerR HTH family regulatory protein 19 86 1.1E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_05600 3c3a9761a9ecd2701a311c24133c5a26 122 SMART SM00422 19 89 5.1E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_05600 3c3a9761a9ecd2701a311c24133c5a26 122 SUPERFAMILY SSF46955 17 114 1.79E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_05600 3c3a9761a9ecd2701a311c24133c5a26 122 Gene3D G3DSA:1.10.1660.10 14 89 4.7E-19 T 14-10-2018 C4901_08780 2459a1583e7d2326054c6150f4a80b5c 125 PIRSF PIRSF008711 2 125 1.2E-56 T 14-10-2018 IPR009794 Protein of unknown function DUF1362 C4901_08780 2459a1583e7d2326054c6150f4a80b5c 125 SUPERFAMILY SSF89232 4 124 9.94E-44 T 14-10-2018 IPR036698 TM1070-like superfamily C4901_08780 2459a1583e7d2326054c6150f4a80b5c 125 Pfam PF07100 Anabaena sensory rhodopsin transducer 6 123 1.4E-51 T 14-10-2018 IPR009794 Protein of unknown function DUF1362 C4901_08780 2459a1583e7d2326054c6150f4a80b5c 125 Gene3D G3DSA:2.60.290.11 3 125 1.9E-52 T 14-10-2018 IPR036698 TM1070-like superfamily C4901_01185 b4cb1943bf3800ddff7f89efb987df71 296 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 74 267 5.0E-58 T 14-10-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_01185 b4cb1943bf3800ddff7f89efb987df71 296 Pfam PF00912 Transglycosylase 103 264 2.7E-47 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_01185 b4cb1943bf3800ddff7f89efb987df71 296 Gene3D G3DSA:1.10.3810.10 100 279 6.7E-50 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_01185 b4cb1943bf3800ddff7f89efb987df71 296 SUPERFAMILY SSF53955 99 269 8.44E-54 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Gene3D G3DSA:1.10.8.500 206 269 9.3E-6 T 14-10-2018 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Gene3D G3DSA:1.10.8.500 115 174 6.3E-9 T 14-10-2018 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SMART SM00387 595 721 5.1E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SUPERFAMILY SSF55781 245 416 4.71E-29 T 14-10-2018 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Gene3D G3DSA:3.40.50.12740 760 887 2.5E-39 T 14-10-2018 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Gene3D G3DSA:1.10.287.130 462 549 6.2E-24 T 14-10-2018 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 664 674 6.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 646 660 6.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 681 699 6.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 PRINTS PR00344 Bacterial sensor protein C-terminal signature 705 718 6.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SMART SM00448 761 875 1.2E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Pfam PF00072 Response regulator receiver domain 763 875 2.2E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SUPERFAMILY SSF55874 537 720 1.57E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Pfam PF13185 GAF domain 281 416 2.9E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Gene3D G3DSA:3.30.565.10 550 721 5.3E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SUPERFAMILY SSF58104 134 258 1.99E-11 T 14-10-2018 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 596 718 1.6E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SUPERFAMILY SSF58104 51 173 6.8E-9 T 14-10-2018 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SMART SM00388 480 548 6.5E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SUPERFAMILY SSF47384 466 550 1.9E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Gene3D G3DSA:3.30.450.40 270 418 4.2E-16 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SUPERFAMILY SSF52172 755 882 3.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SMART SM00304 206 258 1.5E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SMART SM00304 114 166 6.7E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SMART SM00304 17 74 1.3E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 Pfam PF00512 His Kinase A (phospho-acceptor) domain 481 548 3.3E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_03740 30d6ff3c8bdd7a7870c729853758508a 888 SMART SM00065 282 433 2.6E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 SUPERFAMILY SSF52172 2 126 5.27E-43 T 14-10-2018 IPR011006 CheY-like superfamily C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 SMART SM00862 150 225 4.3E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 SUPERFAMILY SSF46894 128 227 5.39E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 Gene3D G3DSA:3.40.50.2300 2 127 6.2E-39 T 14-10-2018 C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 8.9E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 3 226 3.8E-103 T 14-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 Gene3D G3DSA:1.10.10.10 128 227 1.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 Pfam PF00072 Response regulator receiver domain 5 117 4.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_00920 1734b272921ef30fececf5f0ca6fb24d 229 SMART SM00448 3 116 9.4E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_02585 6ae9377db566d26879f1c5132fdacc04 461 Gene3D G3DSA:3.30.460.80 12 66 3.1E-5 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02585 6ae9377db566d26879f1c5132fdacc04 461 Pfam PF00374 Nickel-dependent hydrogenase 148 220 2.5E-10 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C4901_02585 6ae9377db566d26879f1c5132fdacc04 461 SUPERFAMILY SSF143243 11 86 1.83E-11 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02585 6ae9377db566d26879f1c5132fdacc04 461 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 28 75 8.8E-9 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02585 6ae9377db566d26879f1c5132fdacc04 461 SUPERFAMILY SSF56762 123 461 2.62E-80 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02585 6ae9377db566d26879f1c5132fdacc04 461 Gene3D G3DSA:1.10.645.20 112 461 4.7E-88 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02585 6ae9377db566d26879f1c5132fdacc04 461 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 238 461 3.2E-33 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02585 6ae9377db566d26879f1c5132fdacc04 461 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 28 74 0.002 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_10275 7fcf20a7658b7c1fdf93e9e80611b5fe 410 SUPERFAMILY SSF103473 11 391 3.79E-55 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_10275 7fcf20a7658b7c1fdf93e9e80611b5fe 410 Pfam PF07690 Major Facilitator Superfamily 240 393 7.0E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_10275 7fcf20a7658b7c1fdf93e9e80611b5fe 410 Pfam PF07690 Major Facilitator Superfamily 23 236 1.5E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_10275 7fcf20a7658b7c1fdf93e9e80611b5fe 410 Gene3D G3DSA:1.20.1250.20 12 393 2.7E-46 T 14-10-2018 C4901_10275 7fcf20a7658b7c1fdf93e9e80611b5fe 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 87 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 Gene3D G3DSA:3.30.420.360 406 763 1.2E-97 T 14-10-2018 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 Gene3D G3DSA:3.30.420.350 508 751 1.2E-97 T 14-10-2018 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 Pfam PF01300 Telomere recombination 219 407 6.6E-43 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 Pfam PF07503 HypF finger 117 150 3.1E-14 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 Pfam PF07503 HypF finger 167 199 5.4E-17 T 14-10-2018 IPR011125 Zinc finger, HypF-type GO:0008270 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 Gene3D G3DSA:3.30.110.120 262 394 2.7E-131 T 14-10-2018 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 PIRSF PIRSF006256 10 770 1.3E-244 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 SUPERFAMILY SSF55821 184 412 5.49E-39 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 SUPERFAMILY SSF54975 11 99 5.45E-24 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 Pfam PF00708 Acylphosphatase 16 99 4.0E-21 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 ProSitePatterns PS00150 Acylphosphatase signature 1. 19 29 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 Gene3D G3DSA:3.90.870.50 17 385 2.7E-131 T 14-10-2018 C4901_12210 e2369e75514b7f8617f56f2b0ceb7bdb 770 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 17 762 4.5E-202 T 14-10-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 Gene3D G3DSA:3.30.565.10 2 215 2.9E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 450 471 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 313 328 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 471 483 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 539 561 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 239 262 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 340 363 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 364 389 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 296 312 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 505 521 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 1.9E-83 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 4 627 8.2E-284 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 ProSitePatterns PS00177 DNA topoisomerase II signature. 418 426 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 SUPERFAMILY SSF56719 390 623 4.45E-75 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 561 622 2.0E-24 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 SMART SM00387 27 173 1.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 Gene3D G3DSA:3.30.230.10 217 391 1.8E-50 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 SUPERFAMILY SSF55874 4 208 9.3E-64 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 519 531 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 109 123 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 416 430 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 481 497 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 564 580 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 31 46 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 499 516 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 66 79 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 PRINTS PR00418 DNA topoisomerase II family signature 268 281 3.7E-58 T 14-10-2018 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 Gene3D G3DSA:3.40.50.670 392 625 1.8E-84 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 SMART SM00433 33 626 1.1E-201 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 Pfam PF01751 Toprim domain 415 524 6.7E-13 T 14-10-2018 IPR006171 TOPRIM domain C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 SUPERFAMILY SSF54211 219 389 4.17E-40 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 Pfam PF00204 DNA gyrase B 248 386 8.0E-36 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 29 170 2.8E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_03620 5a2abbb4a8466541109d78b0e7ac93f5 631 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 630 45.615 T 14-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_10190 b7b28e00038de462421b7bdd4660fa80 518 SUPERFAMILY SSF53067 152 323 2.39E-43 T 14-10-2018 C4901_10190 b7b28e00038de462421b7bdd4660fa80 518 Gene3D G3DSA:1.10.3210.10 327 508 1.6E-23 T 14-10-2018 C4901_10190 b7b28e00038de462421b7bdd4660fa80 518 Gene3D G3DSA:3.30.420.150 132 310 4.2E-81 T 14-10-2018 C4901_10190 b7b28e00038de462421b7bdd4660fa80 518 SUPERFAMILY SSF109604 329 469 1.35E-19 T 14-10-2018 C4901_10190 b7b28e00038de462421b7bdd4660fa80 518 Gene3D G3DSA:3.30.420.40 29 317 4.2E-81 T 14-10-2018 C4901_10190 b7b28e00038de462421b7bdd4660fa80 518 Pfam PF02541 Ppx/GppA phosphatase family 41 321 4.2E-66 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 C4901_10190 b7b28e00038de462421b7bdd4660fa80 518 PIRSF PIRSF001267 18 509 1.7E-135 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 C4901_10190 b7b28e00038de462421b7bdd4660fa80 518 SUPERFAMILY SSF53067 27 146 2.07E-29 T 14-10-2018 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 SUPERFAMILY SSF47384 652 733 1.43E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 Gene3D G3DSA:1.10.287.130 653 732 4.0E-24 T 14-10-2018 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 PRINTS PR00344 Bacterial sensor protein C-terminal signature 815 829 8.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 PRINTS PR00344 Bacterial sensor protein C-terminal signature 872 885 8.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 PRINTS PR00344 Bacterial sensor protein C-terminal signature 833 843 8.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 PRINTS PR00344 Bacterial sensor protein C-terminal signature 849 867 8.7E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 SMART SM00388 666 732 7.0E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 SUPERFAMILY SSF55874 721 884 5.76E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 Pfam PF00512 His Kinase A (phospho-acceptor) domain 666 732 4.1E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 Gene3D G3DSA:1.10.4160.10 20 476 1.0E-11 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 779 884 4.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 SMART SM00387 779 888 1.4E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06230 5f020cfa69d72db0f9648baa516e5e7c 990 Gene3D G3DSA:3.30.565.10 733 886 1.3E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 SUPERFAMILY SSF52343 453 607 1.7E-42 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 Pfam PF00667 FAD binding domain 365 432 1.0E-14 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 Gene3D G3DSA:1.20.990.10 284 392 2.8E-62 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 Gene3D G3DSA:3.40.50.80 453 607 3.6E-48 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00369 Flavodoxin signature 179 198 2.5E-15 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00369 Flavodoxin signature 123 134 2.5E-15 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00369 Flavodoxin signature 75 88 2.5E-15 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00369 Flavodoxin signature 155 165 2.5E-15 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 SUPERFAMILY SSF52218 73 216 1.82E-44 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 274 284 5.8E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 427 436 5.8E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 5.8E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 5.8E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 5.8E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 5.8E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 502 513 5.8E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 5.8E-25 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 Gene3D G3DSA:3.40.50.360 65 221 3.1E-45 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 SUPERFAMILY SSF63380 234 453 1.24E-52 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 Pfam PF00258 Flavodoxin 76 207 2.2E-28 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 Pfam PF00175 Oxidoreductase NAD-binding domain 465 571 4.6E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 Gene3D G3DSA:2.40.30.10 238 447 2.8E-62 T 14-10-2018 C4901_15515 1cbe04be751e40885ea8938fdc2fe9b5 607 PIRSF PIRSF000207 15 607 6.6E-199 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 80 2.1E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 SMART SM00345 21 80 2.0E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 1.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 1.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 Gene3D G3DSA:3.40.1410.10 84 249 2.5E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 Pfam PF07702 UTRA domain 105 239 5.5E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 SMART SM00866 101 240 1.3E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 SUPERFAMILY SSF46785 15 84 4.36E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 Gene3D G3DSA:1.10.10.10 16 83 4.1E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_00955 4c54f41151340dc1f59ea5b196c8f779 252 SUPERFAMILY SSF64288 68 247 1.22E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C4901_09430 981c7b96cb3b1c596567b5de525da928 439 Gene3D G3DSA:3.40.1350.30 128 269 4.0E-102 T 14-10-2018 C4901_09430 981c7b96cb3b1c596567b5de525da928 439 SUPERFAMILY SSF53335 69 437 1.33E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_09430 981c7b96cb3b1c596567b5de525da928 439 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 368 398 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site C4901_09430 981c7b96cb3b1c596567b5de525da928 439 SUPERFAMILY SSF50249 11 66 9.14E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_09430 981c7b96cb3b1c596567b5de525da928 439 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 11 438 60.45 T 14-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 C4901_09430 981c7b96cb3b1c596567b5de525da928 439 Pfam PF01938 TRAM domain 16 43 1.7E-4 T 14-10-2018 IPR002792 TRAM domain C4901_09430 981c7b96cb3b1c596567b5de525da928 439 Gene3D G3DSA:2.40.50.140 2 80 6.4E-23 T 14-10-2018 C4901_09430 981c7b96cb3b1c596567b5de525da928 439 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 420 430 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site C4901_09430 981c7b96cb3b1c596567b5de525da928 439 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 267 435 3.1E-22 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 C4901_09430 981c7b96cb3b1c596567b5de525da928 439 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 17 430 1.6E-94 T 14-10-2018 C4901_09430 981c7b96cb3b1c596567b5de525da928 439 Gene3D G3DSA:3.40.50.150 81 432 4.0E-102 T 14-10-2018 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 435 447 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 Gene3D G3DSA:1.10.510.10 399 572 2.0E-30 T 14-10-2018 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 Gene3D G3DSA:3.30.200.20 307 396 2.9E-8 T 14-10-2018 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 Pfam PF13672 Protein phosphatase 2C 86 246 2.9E-12 T 14-10-2018 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 Gene3D G3DSA:3.60.40.10 41 283 9.2E-34 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 SMART SM00220 315 575 1.0E-15 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 SUPERFAMILY SSF81606 56 281 4.05E-37 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 SMART SM00332 46 280 0.0024 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 Pfam PF00069 Protein kinase domain 342 512 1.5E-26 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 SMART SM00331 72 282 8.5E-9 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_06410 6c4180bfe1f253646483e9db40279c9d 606 SUPERFAMILY SSF56112 300 584 3.91E-47 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 176 197 3.6E-5 T 14-10-2018 C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 96 116 3.6E-5 T 14-10-2018 C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 200 220 3.6E-5 T 14-10-2018 C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 PRINTS PR01166 Cytochrome c oxidase subunit II signature 220 237 3.6E-5 T 14-10-2018 C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 Pfam PF06481 COX Aromatic Rich Motif 270 314 7.1E-6 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 Gene3D G3DSA:2.60.40.420 147 313 8.0E-45 T 14-10-2018 IPR008972 Cupredoxin C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 Gene3D G3DSA:1.10.287.90 29 112 2.2E-17 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 177 251 6.2E-9 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 SUPERFAMILY SSF81464 20 117 8.99E-11 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00175 b69619931872a1b5cad8a38b2d1d9649 338 SUPERFAMILY SSF49503 155 310 2.25E-40 T 14-10-2018 IPR008972 Cupredoxin C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 SUPERFAMILY SSF50156 95 190 1.19E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 Gene3D G3DSA:3.90.226.10 195 369 7.1E-87 T 14-10-2018 C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 Gene3D G3DSA:2.30.42.10 107 194 7.1E-87 T 14-10-2018 C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 61 377 1.1E-92 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 SUPERFAMILY SSF52096 42 376 1.23E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 Pfam PF03572 Peptidase family S41 206 371 1.8E-52 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 SMART SM00245 180 372 1.3E-67 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 SMART SM00228 107 178 1.2E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 Gene3D G3DSA:3.30.750.44 55 347 7.1E-87 T 14-10-2018 C4901_00880 eef61fc85761b6ff22ce6c437e9d19e2 441 Pfam PF13180 PDZ domain 108 184 5.0E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_07720 19bbdd8f8f48b05c3257ab4280ca6e11 286 Gene3D G3DSA:3.20.20.370 59 273 4.4E-51 T 14-10-2018 C4901_07720 19bbdd8f8f48b05c3257ab4280ca6e11 286 SUPERFAMILY SSF88713 58 262 1.95E-49 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 C4901_07720 19bbdd8f8f48b05c3257ab4280ca6e11 286 Pfam PF01522 Polysaccharide deacetylase 66 182 4.7E-26 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 299 6.8E-47 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 310 3.1E-114 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 3.6E-39 T 14-10-2018 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.6E-39 T 14-10-2018 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 3.6E-39 T 14-10-2018 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 3.6E-39 T 14-10-2018 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 3.6E-39 T 14-10-2018 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 236 257 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 273 291 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 2.0E-76 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 Gene3D G3DSA:3.50.50.60 118 242 2.8E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 SUPERFAMILY SSF51905 1 310 3.24E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_11895 51c6be045c101d0db0c9f590bd0ab0b6 323 Gene3D G3DSA:3.50.50.60 9 308 2.8E-117 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_15200 3da8fefa5d23b2d85cbcd04352319a68 264 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 37 1.8E-5 T 14-10-2018 IPR022453 Zinc finger, MqsA-type C4901_15200 3da8fefa5d23b2d85cbcd04352319a68 264 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 1 65 1.2E-14 T 14-10-2018 IPR032758 Antitoxin MqsA/HigA-2 C4901_15200 3da8fefa5d23b2d85cbcd04352319a68 264 Gene3D G3DSA:1.20.58.720 1 66 1.5E-18 T 14-10-2018 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 PIRSF PIRSF036389 1 708 9.1E-241 T 14-10-2018 IPR012368 Oxidoreductase molybdopterin-binding subunit, IorB-related C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 2 24 7.5E-6 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 Gene3D G3DSA:3.30.365.10 41 178 5.0E-18 T 14-10-2018 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 SUPERFAMILY SSF56003 41 239 2.02E-36 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 308 543 2.3E-32 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 578 659 2.2E-12 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 44 189 2.6E-8 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 Gene3D G3DSA:3.30.365.10 562 708 2.6E-34 T 14-10-2018 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 Gene3D G3DSA:3.90.1170.50 179 259 3.0E-8 T 14-10-2018 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 Gene3D G3DSA:3.30.365.10 336 427 2.6E-61 T 14-10-2018 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 SUPERFAMILY SSF56003 308 704 7.07E-113 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 Gene3D G3DSA:3.30.365.10 312 539 2.6E-61 T 14-10-2018 C4901_12445 f0f6449d37145d1248d1caef699e66d1 709 SMART SM01008 206 284 4.4E-14 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead C4901_15630 727f82ce600ef65c6ba57005d6313b3f 122 Pfam PF13560 Helix-turn-helix domain 29 82 5.5E-8 T 14-10-2018 C4901_15630 727f82ce600ef65c6ba57005d6313b3f 122 Gene3D G3DSA:1.10.260.40 19 94 2.8E-22 T 14-10-2018 C4901_15630 727f82ce600ef65c6ba57005d6313b3f 122 SUPERFAMILY SSF47413 25 80 2.53E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_15630 727f82ce600ef65c6ba57005d6313b3f 122 SMART SM00530 33 86 2.1E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_11020 755fb4719bf4899a660835c6b9c85063 546 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 135 506 2.5E-86 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain C4901_11020 755fb4719bf4899a660835c6b9c85063 546 SUPERFAMILY SSF52540 139 518 1.9E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11020 755fb4719bf4899a660835c6b9c85063 546 Gene3D G3DSA:3.40.50.300 122 506 9.3E-84 T 14-10-2018 C4901_11020 755fb4719bf4899a660835c6b9c85063 546 Gene3D G3DSA:1.10.8.80 211 312 9.3E-84 T 14-10-2018 C4901_11020 755fb4719bf4899a660835c6b9c85063 546 SMART SM00382 146 438 0.0078 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_05580 75a418971a472e525938d635260b476b 120 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.0E-39 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05580 75a418971a472e525938d635260b476b 120 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.0E-39 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05580 75a418971a472e525938d635260b476b 120 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.0E-39 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05580 75a418971a472e525938d635260b476b 120 Gene3D G3DSA:1.10.1900.20 56 120 4.1E-27 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05580 75a418971a472e525938d635260b476b 120 Gene3D G3DSA:1.10.720.90 2 55 6.6E-24 T 14-10-2018 C4901_05580 75a418971a472e525938d635260b476b 120 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 71 4.0E-9 T 14-10-2018 C4901_05580 75a418971a472e525938d635260b476b 120 SUPERFAMILY SSF74731 2 116 9.03E-48 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05580 75a418971a472e525938d635260b476b 120 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.9E-47 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05580 75a418971a472e525938d635260b476b 120 Pfam PF00453 Ribosomal protein L20 3 109 4.1E-46 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05580 75a418971a472e525938d635260b476b 120 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05580 75a418971a472e525938d635260b476b 120 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.339 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04700 d160ccbe7cce729e104dc6a7cb271499 325 SUPERFAMILY SSF53474 32 293 2.95E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_04700 d160ccbe7cce729e104dc6a7cb271499 325 Pfam PF12697 Alpha/beta hydrolase family 59 291 3.3E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_04700 d160ccbe7cce729e104dc6a7cb271499 325 Gene3D G3DSA:3.40.50.1820 50 297 2.2E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_04700 d160ccbe7cce729e104dc6a7cb271499 325 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 218 259 - T 14-10-2018 IPR000952 AB hydrolase 4, conserved site C4901_04700 d160ccbe7cce729e104dc6a7cb271499 325 PIRSF PIRSF005211 1 324 1.9E-103 T 14-10-2018 IPR012020 AB hydrolase 4 family C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 SUPERFAMILY SSF52540 160 403 4.17E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 SMART SM00382 180 323 9.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 Pfam PF00158 Sigma-54 interaction domain 164 326 4.4E-60 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 373 382 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 SUPERFAMILY SSF52172 22 203 1.18E-12 T 14-10-2018 IPR011006 CheY-like superfamily C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 Pfam PF00072 Response regulator receiver domain 27 74 4.0E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 Gene3D G3DSA:3.40.50.12740 24 103 4.4E-8 T 14-10-2018 C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 Pfam PF02954 Bacterial regulatory protein, Fis family 440 468 6.4E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 SUPERFAMILY SSF46689 422 470 1.2E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 Gene3D G3DSA:1.10.8.60 332 408 3.2E-19 T 14-10-2018 C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 246 261 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 Gene3D G3DSA:3.40.50.300 153 331 1.1E-58 T 14-10-2018 C4901_05970 a44cebd5d07355c3c73b1ccda6c9a320 473 Gene3D G3DSA:1.10.10.60 423 472 1.3E-11 T 14-10-2018 C4901_08450 9c826a613d63baff67b5182434399d20 361 Gene3D G3DSA:3.40.718.10 1 359 5.0E-143 T 14-10-2018 C4901_08450 9c826a613d63baff67b5182434399d20 361 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 2 356 51.395 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 C4901_08450 9c826a613d63baff67b5182434399d20 361 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 C4901_08450 9c826a613d63baff67b5182434399d20 361 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 3 352 3.1E-129 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C4901_08450 9c826a613d63baff67b5182434399d20 361 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 3 351 2.1E-150 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 C4901_08450 9c826a613d63baff67b5182434399d20 361 SMART SM01329 3 352 6.2E-194 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C4901_08450 9c826a613d63baff67b5182434399d20 361 SUPERFAMILY SSF53659 3 356 3.65E-117 T 14-10-2018 C4901_08505 749d9bd774d7c2e7e0cfef554bb1a93b 335 SUPERFAMILY SSF56349 64 329 1.06E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_08505 749d9bd774d7c2e7e0cfef554bb1a93b 335 Gene3D G3DSA:1.10.443.10 173 332 3.5E-30 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_08505 749d9bd774d7c2e7e0cfef554bb1a93b 335 Gene3D G3DSA:1.10.150.130 58 172 2.1E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_08505 749d9bd774d7c2e7e0cfef554bb1a93b 335 Pfam PF00589 Phage integrase family 174 326 3.5E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SUPERFAMILY SSF55785 138 248 3.49E-29 T 14-10-2018 IPR035965 PAS domain superfamily C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Pfam PF00563 EAL domain 597 838 1.9E-48 T 14-10-2018 IPR001633 EAL domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SUPERFAMILY SSF141868 597 839 2.09E-53 T 14-10-2018 IPR035919 EAL domain superfamily C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 423 583 2.1E-47 T 14-10-2018 IPR000160 GGDEF domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Pfam PF13426 PAS domain 22 116 0.012 T 14-10-2018 IPR000014 PAS domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Pfam PF13426 PAS domain 138 239 9.9E-17 T 14-10-2018 IPR000014 PAS domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Pfam PF00990 Diguanylate cyclase, GGDEF domain 424 580 9.2E-44 T 14-10-2018 IPR000160 GGDEF domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SMART SM00091 126 192 8.8E-7 T 14-10-2018 IPR000014 PAS domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SMART SM00091 11 77 16.0 T 14-10-2018 IPR000014 PAS domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SMART SM00052 590 842 3.1E-43 T 14-10-2018 IPR001633 EAL domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Gene3D G3DSA:3.30.450.20 10 118 8.6E-11 T 14-10-2018 C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SMART SM00086 78 118 41.0 T 14-10-2018 IPR001610 PAC motif C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SMART SM00086 198 240 2.4E-6 T 14-10-2018 IPR001610 PAC motif C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SUPERFAMILY SSF55073 429 583 7.85E-47 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Gene3D G3DSA:3.30.450.40 257 408 1.7E-9 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Gene3D G3DSA:3.20.20.450 594 842 4.1E-60 T 14-10-2018 IPR035919 EAL domain superfamily C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SUPERFAMILY SSF55785 12 116 6.81E-9 T 14-10-2018 IPR035965 PAS domain superfamily C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Gene3D G3DSA:3.30.70.270 418 586 8.5E-55 T 14-10-2018 C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 118 8.8E-6 T 14-10-2018 IPR000014 PAS domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 129 247 5.1E-21 T 14-10-2018 IPR000014 PAS domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Gene3D G3DSA:3.30.450.20 122 256 5.4E-43 T 14-10-2018 C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SUPERFAMILY SSF55781 234 405 3.19E-12 T 14-10-2018 C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 SMART SM00267 413 585 2.2E-57 T 14-10-2018 IPR000160 GGDEF domain C4901_04860 54c78e27eb5e9d56e0bf6dbdf5556d51 842 Pfam PF13185 GAF domain 269 405 5.6E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_08695 fbf2eda8ca6b84611d46aff3c18e09c6 265 SUPERFAMILY SSF55315 9 79 4.47E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C4901_08695 fbf2eda8ca6b84611d46aff3c18e09c6 265 SMART SM00967 10 86 9.6E-14 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 C4901_08695 fbf2eda8ca6b84611d46aff3c18e09c6 265 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 9 247 8.7E-67 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 C4901_08695 fbf2eda8ca6b84611d46aff3c18e09c6 265 Gene3D G3DSA:3.40.1280.10 83 249 1.6E-59 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C4901_08695 fbf2eda8ca6b84611d46aff3c18e09c6 265 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 10 79 8.0E-13 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 C4901_08695 fbf2eda8ca6b84611d46aff3c18e09c6 265 Gene3D G3DSA:3.30.1330.30 1 81 5.4E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like C4901_08695 fbf2eda8ca6b84611d46aff3c18e09c6 265 SUPERFAMILY SSF75217 82 252 1.44E-47 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C4901_08695 fbf2eda8ca6b84611d46aff3c18e09c6 265 Pfam PF00588 SpoU rRNA Methylase family 102 242 9.2E-39 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C4901_14500 0730706f67fec3cf9f5fdea461933fd7 265 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 33 252 2.6E-9 T 14-10-2018 C4901_14500 0730706f67fec3cf9f5fdea461933fd7 265 SUPERFAMILY SSF53850 107 233 5.72E-5 T 14-10-2018 C4901_09170 e51b3a311d49efdde8e6e9ebe9886773 160 Gene3D G3DSA:1.10.260.40 63 140 1.0E-8 T 14-10-2018 C4901_09170 e51b3a311d49efdde8e6e9ebe9886773 160 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 83 134 3.5E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_09170 e51b3a311d49efdde8e6e9ebe9886773 160 SUPERFAMILY SSF47413 80 141 1.16E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_05875 3ab5dd84a3932a9ec625ec4a057f8269 356 SUPERFAMILY SSF47648 27 87 8.24E-11 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_05875 3ab5dd84a3932a9ec625ec4a057f8269 356 Pfam PF02885 Glycosyl transferase family, helical bundle domain 25 80 1.5E-6 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_05875 3ab5dd84a3932a9ec625ec4a057f8269 356 SUPERFAMILY SSF52418 91 346 2.55E-37 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_05875 3ab5dd84a3932a9ec625ec4a057f8269 356 Gene3D G3DSA:3.40.1030.10 88 353 3.0E-91 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_05875 3ab5dd84a3932a9ec625ec4a057f8269 356 Gene3D G3DSA:1.20.970.10 17 85 2.6E-20 T 14-10-2018 C4901_06120 1dc1d76000b2ec597421f9015eb31f14 320 SUPERFAMILY SSF81464 43 129 4.91E-17 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06120 1dc1d76000b2ec597421f9015eb31f14 320 Gene3D G3DSA:1.10.287.90 41 126 1.3E-21 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06120 1dc1d76000b2ec597421f9015eb31f14 320 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 169 244 7.3E-8 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06120 1dc1d76000b2ec597421f9015eb31f14 320 Gene3D G3DSA:2.60.40.420 136 305 3.6E-45 T 14-10-2018 IPR008972 Cupredoxin C4901_06120 1dc1d76000b2ec597421f9015eb31f14 320 SUPERFAMILY SSF49503 147 281 6.09E-41 T 14-10-2018 IPR008972 Cupredoxin C4901_14725 ea62b8e2dc38fef8c51523a150d18f46 478 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 27 430 4.4E-113 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 C4901_14725 ea62b8e2dc38fef8c51523a150d18f46 478 TIGRFAM TIGR01285 nifN: nitrogenase molybdenum-iron cofactor biosynthesis protein NifN 16 433 6.3E-179 T 14-10-2018 IPR005975 Nitrogenase molybdenum-iron cofactor biosynthesis protein GO:0009399|GO:0065003 C4901_14725 ea62b8e2dc38fef8c51523a150d18f46 478 Gene3D G3DSA:1.20.89.10 272 434 7.1E-122 T 14-10-2018 C4901_14725 ea62b8e2dc38fef8c51523a150d18f46 478 Gene3D G3DSA:3.40.50.1980 17 414 7.1E-122 T 14-10-2018 C4901_14725 ea62b8e2dc38fef8c51523a150d18f46 478 SUPERFAMILY SSF53807 16 436 6.54E-130 T 14-10-2018 C4901_14725 ea62b8e2dc38fef8c51523a150d18f46 478 Gene3D G3DSA:3.40.50.1980 167 421 7.1E-122 T 14-10-2018 C4901_14725 ea62b8e2dc38fef8c51523a150d18f46 478 Gene3D G3DSA:3.40.50.1980 27 166 7.1E-122 T 14-10-2018 C4901_14725 ea62b8e2dc38fef8c51523a150d18f46 478 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 45 52 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 SMART SM00642 178 584 1.7E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 21 714 0.0 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 SUPERFAMILY SSF51011 605 714 2.59E-20 T 14-10-2018 C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 Gene3D G3DSA:3.20.20.80 157 598 1.5E-182 T 14-10-2018 C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 25 113 5.4E-20 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 Pfam PF00128 Alpha amylase, catalytic domain 322 546 1.4E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 Pfam PF00128 Alpha amylase, catalytic domain 208 293 2.9E-10 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 Gene3D G3DSA:2.60.40.1180 604 715 5.1E-14 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 SUPERFAMILY SSF81296 20 166 8.4E-49 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 Gene3D G3DSA:2.60.40.10 12 156 2.6E-51 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_06055 6e31f6b2c8f6687c02753dc7b932aed0 726 SUPERFAMILY SSF51445 155 592 8.22E-134 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_16205 cb2c3cc9641f196edc10a79979934634 103 SUPERFAMILY SSF51278 1 102 7.98E-43 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16205 cb2c3cc9641f196edc10a79979934634 103 Gene3D G3DSA:2.10.150.10 1 103 1.5E-42 T 14-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16205 cb2c3cc9641f196edc10a79979934634 103 Pfam PF00699 Urease beta subunit 4 99 4.7E-41 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16205 cb2c3cc9641f196edc10a79979934634 103 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 29.534 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16205 cb2c3cc9641f196edc10a79979934634 103 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 1.5E-39 T 14-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 TIGRFAM TIGR00763 lon: endopeptidase La 28 790 7.1E-290 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 27 221 1.9E-29 T 14-10-2018 IPR003111 Lon, substrate-binding domain C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Gene3D G3DSA:2.30.130.40 19 133 8.6E-19 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Gene3D G3DSA:1.10.8.60 512 604 7.8E-28 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Gene3D G3DSA:1.20.58.1480 139 263 2.8E-32 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 PIRSF PIRSF001174 7 792 2.7E-288 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 SMART SM00464 26 221 1.9E-41 T 14-10-2018 IPR003111 Lon, substrate-binding domain C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 376 395 1.5E-48 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 745 763 1.5E-48 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 613 629 1.5E-48 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 722 741 1.5E-48 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 692 711 1.5E-48 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 SMART SM00382 368 513 2.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 589 788 7.7E-75 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 372 510 9.5E-23 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Gene3D G3DSA:3.40.50.300 333 511 2.4E-63 T 14-10-2018 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 SUPERFAMILY SSF88697 26 220 3.73E-21 T 14-10-2018 IPR015947 PUA-like superfamily C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 695 703 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Gene3D G3DSA:3.30.230.10 607 792 4.1E-73 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 Hamap MF_01973 Lon protease [lon]. 27 791 61.483 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 SUPERFAMILY SSF54211 613 789 2.39E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_02280 a6fb07bbeb69eb1ed103db5d36573907 792 SUPERFAMILY SSF52540 329 604 1.0E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_06500 b6278ecae611bf91c6ad7b39b0dab03e 371 Gene3D G3DSA:1.10.3290.10 46 258 1.1E-33 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_06500 b6278ecae611bf91c6ad7b39b0dab03e 371 SUPERFAMILY SSF140931 91 250 9.02E-28 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_06500 b6278ecae611bf91c6ad7b39b0dab03e 371 Pfam PF02661 Fic/DOC family 106 209 6.5E-16 T 14-10-2018 IPR003812 Fido domain C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 Gene3D G3DSA:3.50.50.60 13 343 4.8E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 13 395 2.7E-106 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 Gene3D G3DSA:3.30.9.50 85 274 4.8E-90 T 14-10-2018 C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 163 178 2.9E-16 T 14-10-2018 C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 2.9E-16 T 14-10-2018 C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 13 35 2.9E-16 T 14-10-2018 C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 2.9E-16 T 14-10-2018 C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 SUPERFAMILY SSF51905 12 388 1.84E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 Pfam PF01494 FAD binding domain 13 353 1.3E-25 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C4901_01640 c89d4ff60cfb3666d110947b542aa54c 409 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 299 312 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 1.1E-9 T 14-10-2018 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 1.1E-9 T 14-10-2018 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 1.1E-9 T 14-10-2018 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 Pfam PF10415 Fumarase C C-terminus 406 452 7.4E-10 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 SUPERFAMILY SSF48557 3 452 3.3E-130 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 Gene3D G3DSA:1.20.200.10 138 405 1.5E-98 T 14-10-2018 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 Gene3D G3DSA:1.10.40.30 406 454 4.9E-10 T 14-10-2018 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 1.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.1E-28 T 14-10-2018 IPR000362 Fumarate lyase family C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 Gene3D G3DSA:1.10.275.10 4 137 4.7E-49 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C4901_04110 9e205d30dc1593c6a666f54aa1270b1b 461 Pfam PF00206 Lyase 11 340 5.8E-89 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C4901_02360 53e8f8a50721564c149e923b20fd1831 198 SUPERFAMILY SSF46689 3 74 5.2E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_02360 53e8f8a50721564c149e923b20fd1831 198 SUPERFAMILY SSF48498 105 181 2.83E-6 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C4901_02360 53e8f8a50721564c149e923b20fd1831 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_02360 53e8f8a50721564c149e923b20fd1831 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_02360 53e8f8a50721564c149e923b20fd1831 198 Gene3D G3DSA:1.10.357.10 8 192 6.1E-49 T 14-10-2018 C4901_02360 53e8f8a50721564c149e923b20fd1831 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_02090 6682d49494b5feb464ebb5025fb536f0 99 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 9 74 5.4E-7 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 C4901_02090 6682d49494b5feb464ebb5025fb536f0 99 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 7 86 11.304 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 C4901_02090 6682d49494b5feb464ebb5025fb536f0 99 Gene3D G3DSA:3.30.70.240 4 88 1.1E-15 T 14-10-2018 C4901_02090 6682d49494b5feb464ebb5025fb536f0 99 Pfam PF09827 CRISPR associated protein Cas2 9 73 9.3E-13 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 C4901_02090 6682d49494b5feb464ebb5025fb536f0 99 SUPERFAMILY SSF143430 8 75 9.55E-15 T 14-10-2018 C4901_07010 5101908d91d08dd7703a4630a84f9948 628 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 160 621 1.7E-130 T 14-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 C4901_07010 5101908d91d08dd7703a4630a84f9948 628 Gene3D G3DSA:2.60.40.10 524 628 4.0E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_07010 5101908d91d08dd7703a4630a84f9948 628 SUPERFAMILY SSF74650 161 525 1.54E-105 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 C4901_07010 5101908d91d08dd7703a4630a84f9948 628 Gene3D G3DSA:2.70.98.10 159 523 4.9E-117 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 C4901_07010 5101908d91d08dd7703a4630a84f9948 628 SUPERFAMILY SSF81296 531 626 2.66E-10 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_11295 dd56c43983102442a987640a6b41e53c 347 Gene3D G3DSA:3.30.250.10 269 328 4.7E-26 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal C4901_11295 dd56c43983102442a987640a6b41e53c 347 PRINTS PR00142 RecA protein signature 244 273 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 PRINTS PR00142 RecA protein signature 94 123 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 PRINTS PR00142 RecA protein signature 166 195 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 PRINTS PR00142 RecA protein signature 298 315 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 PRINTS PR00142 RecA protein signature 128 157 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 PRINTS PR00142 RecA protein signature 211 239 3.8E-85 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 324 4.7E-173 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 SUPERFAMILY SSF52540 5 268 1.61E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11295 dd56c43983102442a987640a6b41e53c 347 SMART SM00382 58 229 2.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_11295 dd56c43983102442a987640a6b41e53c 347 SUPERFAMILY SSF54752 269 325 8.76E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal C4901_11295 dd56c43983102442a987640a6b41e53c 347 Hamap MF_00268 Protein RecA [recA]. 5 330 52.102 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 Gene3D G3DSA:3.40.50.300 30 268 3.5E-83 T 14-10-2018 C4901_11295 dd56c43983102442a987640a6b41e53c 347 Pfam PF00154 recA bacterial DNA recombination protein 7 269 8.1E-146 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 C4901_11295 dd56c43983102442a987640a6b41e53c 347 ProSitePatterns PS00321 recA signature. 214 222 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 C4901_01925 ad0502707367e3c9218976a6a80808a9 696 SUPERFAMILY SSF52540 105 403 3.01E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01925 ad0502707367e3c9218976a6a80808a9 696 Pfam PF00350 Dynamin family 114 328 2.1E-15 T 14-10-2018 IPR022812 Dynamin superfamily C4901_13320 bf415ebaf5341e8fd185ee8590d839cf 195 SUPERFAMILY SSF53448 2 180 9.24E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_13320 bf415ebaf5341e8fd185ee8590d839cf 195 Pfam PF12804 MobA-like NTP transferase domain 2 153 3.1E-25 T 14-10-2018 IPR025877 MobA-like NTP transferase C4901_13320 bf415ebaf5341e8fd185ee8590d839cf 195 Gene3D G3DSA:3.90.550.10 1 186 3.1E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_08395 33636f44bb34501e583a35a804ce50ce 342 SUPERFAMILY SSF53335 55 339 5.71E-7 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_08395 33636f44bb34501e583a35a804ce50ce 342 Pfam PF10017 Histidine-specific methyltransferase, SAM-dependent 38 340 1.5E-95 T 14-10-2018 IPR019257 Histidine-specific methyltransferase, SAM-dependent C4901_08395 33636f44bb34501e583a35a804ce50ce 342 Gene3D G3DSA:3.40.50.150 64 242 9.2E-48 T 14-10-2018 C4901_08395 33636f44bb34501e583a35a804ce50ce 342 TIGRFAM TIGR03438 egtD_ergothio: dimethylhistidine N-methyltransferase 39 338 4.1E-99 T 14-10-2018 IPR035094 Histidine N-alpha-methyltransferase KEGG: 00340+2.1.1.44|MetaCyc: PWY-7255|MetaCyc: PWY-7550 C4901_08395 33636f44bb34501e583a35a804ce50ce 342 PIRSF PIRSF018005 23 342 3.0E-103 T 14-10-2018 IPR017804 Methyltransferase EgtD-like GO:0008168 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 55.058 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 PRINTS PR00073 Coprogen oxidase signature 31 47 1.2E-83 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 PRINTS PR00073 Coprogen oxidase signature 232 259 1.2E-83 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 PRINTS PR00073 Coprogen oxidase signature 260 286 1.2E-83 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 PRINTS PR00073 Coprogen oxidase signature 123 145 1.2E-83 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 PRINTS PR00073 Coprogen oxidase signature 48 69 1.2E-83 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 PRINTS PR00073 Coprogen oxidase signature 90 114 1.2E-83 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 PRINTS PR00073 Coprogen oxidase signature 160 189 1.2E-83 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 SUPERFAMILY SSF102886 7 300 3.27E-132 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 PIRSF PIRSF000166 3 301 4.3E-126 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 14-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 Gene3D G3DSA:3.40.1500.10 1 300 5.0E-133 T 14-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_00495 3f489b1bc2250c74e0b64b885e0780b2 304 Pfam PF01218 Coproporphyrinogen III oxidase 8 300 5.1E-130 T 14-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 55 299 34.548 T 14-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 PRINTS PR00377 Inositol monophosphatase superfamily signature 127 143 1.5E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 PRINTS PR00377 Inositol monophosphatase superfamily signature 87 107 1.5E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 PRINTS PR00377 Inositol monophosphatase superfamily signature 109 125 1.5E-7 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 Pfam PF00459 Inositol monophosphatase family 59 288 1.7E-42 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 258 272 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 Gene3D G3DSA:3.30.540.10 52 191 4.8E-39 T 14-10-2018 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 SUPERFAMILY SSF56655 53 306 9.42E-65 T 14-10-2018 C4901_09645 34594d8e15c13877e2ffc617dbb43c23 308 Gene3D G3DSA:3.40.190.80 198 301 1.5E-25 T 14-10-2018 C4901_05400 eac8352b3954b7b9a71e646367c81ba0 888 Gene3D G3DSA:1.20.1640.10 263 453 2.9E-8 T 14-10-2018 C4901_05400 eac8352b3954b7b9a71e646367c81ba0 888 Gene3D G3DSA:1.20.1640.10 723 888 4.7E-10 T 14-10-2018 C4901_05400 eac8352b3954b7b9a71e646367c81ba0 888 TIGRFAM TIGR03480 HpnN: hopanoid biosynthesis associated RND transporter like protein HpnN 22 880 2.5E-278 T 14-10-2018 IPR017841 Hopanoid biosynthesis associated RND transporter-like protein HpnN C4901_05400 eac8352b3954b7b9a71e646367c81ba0 888 SUPERFAMILY SSF82866 256 444 7.19E-26 T 14-10-2018 C4901_05400 eac8352b3954b7b9a71e646367c81ba0 888 Pfam PF03176 MMPL family 669 879 2.1E-9 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 C4901_05400 eac8352b3954b7b9a71e646367c81ba0 888 Pfam PF03176 MMPL family 254 443 1.0E-20 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 C4901_05400 eac8352b3954b7b9a71e646367c81ba0 888 SUPERFAMILY SSF82866 706 879 9.29E-23 T 14-10-2018 C4901_10070 832320087a1151068c7c38c4b64ce948 91 Gene3D G3DSA:3.30.1360.20 6 89 8.9E-29 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C4901_10070 832320087a1151068c7c38c4b64ce948 91 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 10 64 8.4E-6 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C4901_10070 832320087a1151068c7c38c4b64ce948 91 SUPERFAMILY SSF55248 10 65 6.41E-11 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C4901_11630 8cc6e1f4462b54ea49e6468b6bc09771 408 SUPERFAMILY SSF55073 235 384 3.45E-39 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_11630 8cc6e1f4462b54ea49e6468b6bc09771 408 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 227 383 5.0E-37 T 14-10-2018 IPR000160 GGDEF domain C4901_11630 8cc6e1f4462b54ea49e6468b6bc09771 408 SMART SM00267 219 385 5.4E-38 T 14-10-2018 IPR000160 GGDEF domain C4901_11630 8cc6e1f4462b54ea49e6468b6bc09771 408 Gene3D G3DSA:3.30.70.270 224 390 1.6E-45 T 14-10-2018 C4901_11630 8cc6e1f4462b54ea49e6468b6bc09771 408 Pfam PF00990 Diguanylate cyclase, GGDEF domain 230 380 3.1E-37 T 14-10-2018 IPR000160 GGDEF domain C4901_00020 1320cd0f35278b2bc294ae718b843141 349 ProSitePatterns PS00618 RecF protein signature 2. 293 311 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 C4901_00020 1320cd0f35278b2bc294ae718b843141 349 Gene3D G3DSA:3.40.50.300 6 327 2.3E-69 T 14-10-2018 C4901_00020 1320cd0f35278b2bc294ae718b843141 349 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 334 1.7E-61 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 C4901_00020 1320cd0f35278b2bc294ae718b843141 349 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 349 63.285 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 C4901_00020 1320cd0f35278b2bc294ae718b843141 349 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 329 2.0E-14 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C4901_00020 1320cd0f35278b2bc294ae718b843141 349 SUPERFAMILY SSF52540 1 328 3.68E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00020 1320cd0f35278b2bc294ae718b843141 349 Gene3D G3DSA:1.20.1050.90 119 292 2.3E-69 T 14-10-2018 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 SUPERFAMILY SSF69055 305 397 2.88E-29 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 SUPERFAMILY SSF51735 14 159 1.84E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 SUPERFAMILY SSF55347 135 277 8.83E-58 T 14-10-2018 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 Gene3D G3DSA:1.10.1740.10 316 399 3.8E-27 T 14-10-2018 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 155 242 1.6E-35 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 Gene3D G3DSA:3.40.50.720 5 159 1.4E-42 T 14-10-2018 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 Pfam PF13288 DXP reductoisomerase C-terminal domain 274 390 2.3E-39 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 PIRSF PIRSF006205 12 402 2.0E-139 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 15 141 1.6E-35 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 15 395 43.274 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C4901_10405 ea67491f3a8b80eb6b0bdb2ea8b4dfd7 407 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 15 393 1.9E-138 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 C4901_10770 18a2011d66e0686d00348af52dc28677 485 PIRSF PIRSF000130 1 485 4.0E-201 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C4901_10770 18a2011d66e0686d00348af52dc28677 485 SUPERFAMILY SSF54631 93 202 1.26E-27 T 14-10-2018 C4901_10770 18a2011d66e0686d00348af52dc28677 485 Pfam PF00571 CBS domain 149 201 3.8E-5 T 14-10-2018 IPR000644 CBS domain C4901_10770 18a2011d66e0686d00348af52dc28677 485 Pfam PF00571 CBS domain 94 138 3.4E-12 T 14-10-2018 IPR000644 CBS domain C4901_10770 18a2011d66e0686d00348af52dc28677 485 Gene3D G3DSA:3.20.20.70 1 484 1.2E-207 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_10770 18a2011d66e0686d00348af52dc28677 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 293 305 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 C4901_10770 18a2011d66e0686d00348af52dc28677 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 7 484 81.951 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C4901_10770 18a2011d66e0686d00348af52dc28677 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 7 453 1.9E-189 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 C4901_10770 18a2011d66e0686d00348af52dc28677 485 SMART SM00116 156 204 6.7E-8 T 14-10-2018 IPR000644 CBS domain C4901_10770 18a2011d66e0686d00348af52dc28677 485 SMART SM00116 95 142 1.3E-10 T 14-10-2018 IPR000644 CBS domain C4901_10770 18a2011d66e0686d00348af52dc28677 485 SUPERFAMILY SSF51412 2 475 3.79E-123 T 14-10-2018 C4901_10770 18a2011d66e0686d00348af52dc28677 485 SMART SM01240 6 471 0.0 T 14-10-2018 C4901_10770 18a2011d66e0686d00348af52dc28677 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 471 4.7E-160 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 C4901_14360 2ace76007a58dfb28a018d246995e787 415 Gene3D G3DSA:3.30.70.20 21 101 1.0E-6 T 14-10-2018 C4901_14360 2ace76007a58dfb28a018d246995e787 415 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 28 39 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_14360 2ace76007a58dfb28a018d246995e787 415 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 79 90 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_14360 2ace76007a58dfb28a018d246995e787 415 Pfam PF13183 4Fe-4S dicluster domain 26 92 1.4E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_14360 2ace76007a58dfb28a018d246995e787 415 SUPERFAMILY SSF46548 20 106 1.83E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_14360 2ace76007a58dfb28a018d246995e787 415 PIRSF PIRSF000139 14 411 1.1E-90 T 14-10-2018 C4901_14360 2ace76007a58dfb28a018d246995e787 415 Pfam PF02754 Cysteine-rich domain 181 261 7.7E-11 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_14360 2ace76007a58dfb28a018d246995e787 415 Pfam PF02754 Cysteine-rich domain 300 384 3.5E-13 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 Gene3D G3DSA:3.20.20.70 437 795 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 Pfam PF01645 Conserved region in glutamate synthase 796 1159 1.1E-152 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 Pfam PF01493 GXGXG motif 1240 1425 3.2E-78 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 Gene3D G3DSA:3.20.20.70 485 1174 0.0 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 SUPERFAMILY SSF69336 1220 1472 1.03E-85 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 SUPERFAMILY SSF56235 20 434 2.92E-135 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 Pfam PF00310 Glutamine amidotransferases class-II 20 432 5.1E-156 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 Gene3D G3DSA:3.60.20.10 20 547 0.0 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 Gene3D G3DSA:2.160.20.60 1214 1479 2.1E-99 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 Pfam PF04898 Glutamate synthase central domain 459 739 1.2E-107 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 C4901_16280 1bd0ee8bd8073e47f83a72eacb2a9cbd 1481 SUPERFAMILY SSF51395 454 1180 1.63E-253 T 14-10-2018 C4901_01695 fe182082bb5f6daf35fc080d413f063a 265 Gene3D G3DSA:3.40.190.10 108 208 2.1E-19 T 14-10-2018 C4901_01695 fe182082bb5f6daf35fc080d413f063a 265 Gene3D G3DSA:3.40.190.10 32 233 2.1E-19 T 14-10-2018 C4901_01695 fe182082bb5f6daf35fc080d413f063a 265 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 32 257 3.8E-32 T 14-10-2018 C4901_01695 fe182082bb5f6daf35fc080d413f063a 265 SUPERFAMILY SSF53850 26 233 1.38E-9 T 14-10-2018 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 Pfam PF16360 GTP-binding GTPase Middle Region 102 180 1.7E-27 T 14-10-2018 IPR032305 GTP-binding protein, middle domain C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 Gene3D G3DSA:3.40.50.11060 5 126 1.8E-36 T 14-10-2018 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 Gene3D G3DSA:3.40.50.300 185 353 2.4E-40 T 14-10-2018 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 Hamap MF_00900 GTPase HflX [hflX]. 15 377 48.427 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 PIRSF PIRSF006809 1 407 1.6E-144 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 Pfam PF01926 50S ribosome-binding GTPase 188 306 1.0E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 188 208 1.3E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 209 227 1.3E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 255 273 1.3E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 1 348 4.6E-148 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 SUPERFAMILY SSF52540 186 349 5.48E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10150 fb9a164e0f9aa42c479a244676000b1b 429 Pfam PF13167 GTP-binding GTPase N-terminal 13 100 6.3E-30 T 14-10-2018 IPR025121 GTPase HflX, N-terminal C4901_04430 182b1c30d53aad7c8d289d8a0bf25c57 479 Pfam PF00209 Sodium:neurotransmitter symporter family 38 154 8.4E-9 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 C4901_04430 182b1c30d53aad7c8d289d8a0bf25c57 479 SUPERFAMILY SSF161070 38 473 8.24E-51 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 154 180 2.1E-26 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 2.1E-26 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 102 121 2.1E-26 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR01959 SuhB family inositol monophosphatase signature 196 208 2.1E-26 T 14-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 Gene3D G3DSA:3.40.190.80 139 262 6.1E-35 T 14-10-2018 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 4.6E-61 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 4.6E-61 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 4.6E-61 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 79 95 4.6E-61 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 4.6E-61 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 128 151 4.6E-61 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 209 223 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 Pfam PF00459 Inositol monophosphatase family 2 250 1.9E-67 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 SUPERFAMILY SSF56655 1 257 3.14E-85 T 14-10-2018 C4901_10880 22184d49a94694cdcb4d6023203f929c 264 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 79 92 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site C4901_10880 22184d49a94694cdcb4d6023203f929c 264 Gene3D G3DSA:3.30.540.10 1 138 3.2E-51 T 14-10-2018 C4901_14730 01bc05b5b560eb23d7791d6936905571 464 TIGRFAM TIGR01283 nifE: nitrogenase MoFe cofactor biosynthesis protein NifE 6 458 2.9E-202 T 14-10-2018 IPR005973 Nitrogenase MoFe cofactor biosynthesis protein NifE GO:0009399|GO:0065003 C4901_14730 01bc05b5b560eb23d7791d6936905571 464 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 63 70 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C4901_14730 01bc05b5b560eb23d7791d6936905571 464 SUPERFAMILY SSF53807 19 456 3.64E-145 T 14-10-2018 C4901_14730 01bc05b5b560eb23d7791d6936905571 464 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 45 444 2.4E-112 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 C4901_14730 01bc05b5b560eb23d7791d6936905571 464 Gene3D G3DSA:3.40.50.12380 182 452 5.0E-112 T 14-10-2018 C4901_14730 01bc05b5b560eb23d7791d6936905571 464 Gene3D G3DSA:3.40.50.1980 31 181 9.7E-51 T 14-10-2018 C4901_14730 01bc05b5b560eb23d7791d6936905571 464 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 129 143 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C4901_04975 81c012945d44840ba7b5d85a3af90e75 152 Gene3D G3DSA:3.55.40.10 40 107 1.0E-8 T 14-10-2018 C4901_04975 81c012945d44840ba7b5d85a3af90e75 152 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 29 1.8E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04975 81c012945d44840ba7b5d85a3af90e75 152 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 7.6E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04975 81c012945d44840ba7b5d85a3af90e75 152 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 8 147 1.1E-16 T 14-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 C4901_04975 81c012945d44840ba7b5d85a3af90e75 152 Pfam PF12019 Type II transport protein GspH 47 130 1.8E-6 T 14-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 C4901_04975 81c012945d44840ba7b5d85a3af90e75 152 SUPERFAMILY SSF54523 10 127 1.88E-11 T 14-10-2018 C4901_14460 34e17153c844bf8e54e119a8d9fa7233 354 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 328 1.1E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C4901_14460 34e17153c844bf8e54e119a8d9fa7233 354 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 139 150 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C4901_14460 34e17153c844bf8e54e119a8d9fa7233 354 TIGRFAM TIGR01521 FruBisAldo_II_B: fructose-bisphosphate aldolase, class II, Calvin cycle subtype 3 349 8.2E-200 T 14-10-2018 IPR006412 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 C4901_14460 34e17153c844bf8e54e119a8d9fa7233 354 SUPERFAMILY SSF51569 1 329 1.04E-105 T 14-10-2018 C4901_14460 34e17153c844bf8e54e119a8d9fa7233 354 PIRSF PIRSF001359 1 329 2.8E-84 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C4901_14460 34e17153c844bf8e54e119a8d9fa7233 354 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 329 1.5E-101 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C4901_14460 34e17153c844bf8e54e119a8d9fa7233 354 Gene3D G3DSA:3.20.20.70 1 354 1.4E-152 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_14460 34e17153c844bf8e54e119a8d9fa7233 354 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 73 85 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C4901_15865 598c80311d164b7afb74a6a9fd21e969 645 Gene3D G3DSA:1.25.20.10 22 380 1.9E-92 T 14-10-2018 C4901_15865 598c80311d164b7afb74a6a9fd21e969 645 Pfam PF01464 Transglycosylase SLT domain 476 581 7.3E-19 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C4901_15865 598c80311d164b7afb74a6a9fd21e969 645 SUPERFAMILY SSF48435 26 470 1.44E-98 T 14-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 C4901_15865 598c80311d164b7afb74a6a9fd21e969 645 Gene3D G3DSA:1.10.530.10 467 631 3.1E-37 T 14-10-2018 C4901_15865 598c80311d164b7afb74a6a9fd21e969 645 SUPERFAMILY SSF53955 473 625 6.98E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C4901_15865 598c80311d164b7afb74a6a9fd21e969 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 401 461 1.4E-12 T 14-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SUPERFAMILY SSF47226 789 904 6.15E-14 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SMART SM00073 600 697 3.1E-7 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SMART SM00073 787 881 0.047 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SMART SM00073 980 1077 1.6E-13 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SUPERFAMILY SSF55874 1286 1467 5.11E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SUPERFAMILY SSF47226 450 574 8.54E-11 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SMART SM00387 1328 1469 4.9E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Gene3D G3DSA:1.20.120.160 789 909 1.8E-9 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SUPERFAMILY SSF50341 1468 1601 3.27E-27 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SMART SM00260 1461 1602 1.1E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1332 1468 1.1E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SMART SM01231 1145 1283 1.8E-10 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SMART SM00448 1623 1736 2.9E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SUPERFAMILY SSF47226 17 137 7.46E-13 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Pfam PF01627 Hpt domain 18 113 2.4E-5 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Pfam PF01627 Hpt domain 791 876 6.0E-10 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Pfam PF01627 Hpt domain 982 1073 5.4E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Pfam PF01627 Hpt domain 602 696 4.7E-12 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SUPERFAMILY SSF52172 1622 1742 2.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Gene3D G3DSA:2.40.50.180 1492 1557 1.5E-32 T 14-10-2018 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1453 1466 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1429 1447 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1373 1387 2.5E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SUPERFAMILY SSF47226 599 720 1.06E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Pfam PF00072 Response regulator receiver domain 1625 1736 1.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 SUPERFAMILY SSF47226 979 1091 1.7E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Gene3D G3DSA:3.40.50.12740 1624 1745 5.4E-40 T 14-10-2018 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Gene3D G3DSA:1.20.120.160 596 724 1.2E-21 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Gene3D G3DSA:1.20.120.160 974 1106 1.1E-24 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Gene3D G3DSA:3.30.565.10 1282 1468 2.2E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 1146 1282 1.5E-5 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Pfam PF01584 CheW-like domain 1473 1605 1.4E-19 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C4901_14515 6dccf49dcc634001e1ef0ce95643fa6f 1745 Gene3D G3DSA:2.30.30.40 1469 1598 1.5E-32 T 14-10-2018 C4901_12950 d716c64ef554c1b4c6b0852a8f6f9450 148 Gene3D G3DSA:2.40.50.100 6 129 5.5E-21 T 14-10-2018 C4901_12950 d716c64ef554c1b4c6b0852a8f6f9450 148 Pfam PF01597 Glycine cleavage H-protein 12 129 5.2E-27 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate C4901_12950 d716c64ef554c1b4c6b0852a8f6f9450 148 SUPERFAMILY SSF51230 17 112 4.4E-17 T 14-10-2018 IPR011053 Single hybrid motif C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 Pfam PF02151 UvrB/uvrC motif 201 233 1.0E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 590 26.203 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 Gene3D G3DSA:3.40.1440.10 1 98 2.2E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 Pfam PF14520 Helix-hairpin-helix domain 540 588 3.1E-6 T 14-10-2018 C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 379 525 1.8E-41 T 14-10-2018 IPR001162 UvrC family homology region C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 Gene3D G3DSA:1.10.150.20 533 591 4.5E-16 T 14-10-2018 C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 SMART SM00465 14 94 4.8E-20 T 14-10-2018 IPR000305 GIY-YIG endonuclease C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 Pfam PF01541 GIY-YIG catalytic domain 15 89 2.8E-7 T 14-10-2018 IPR000305 GIY-YIG endonuclease C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 SUPERFAMILY SSF47781 508 592 1.02E-16 T 14-10-2018 IPR010994 RuvA domain 2-like C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 SUPERFAMILY SSF82771 14 96 2.62E-20 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 Gene3D G3DSA:3.30.420.340 372 532 9.9E-45 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 SUPERFAMILY SSF46600 190 239 1.57E-11 T 14-10-2018 IPR036876 UVR domain superfamily C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 SMART SM00278 571 590 4.6 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 SMART SM00278 539 558 1.3 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C4901_09410 e0bf08740bd37d7a224594761dfbe02f 599 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 568 3.0E-158 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 SUPERFAMILY SSF52540 57 335 3.72E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 2 423 1.9E-84 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 2 423 28.394 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 SUPERFAMILY SSF116878 105 423 6.02E-41 T 14-10-2018 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 Pfam PF10396 GTP-binding protein TrmE N-terminus 2 104 2.2E-31 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 Gene3D G3DSA:1.20.120.430 106 423 1.2E-86 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 Gene3D G3DSA:3.40.50.300 201 350 1.2E-86 T 14-10-2018 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 Pfam PF01926 50S ribosome-binding GTPase 202 289 6.0E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 201 288 6.7E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 Pfam PF12631 MnmE helical domain 107 420 3.3E-46 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 C4901_17110 96dfbf9b60004b6e31e8e41c0b66b954 423 Gene3D G3DSA:3.30.1360.120 1 105 5.6E-34 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 C4901_07865 cdc117d01f1dbf692ecbf3d5f4e25507 193 SUPERFAMILY SSF55846 6 182 1.15E-55 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C4901_07865 cdc117d01f1dbf692ecbf3d5f4e25507 193 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 31 170 1.2E-25 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C4901_07865 cdc117d01f1dbf692ecbf3d5f4e25507 193 SMART SM00644 19 169 1.0E-41 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C4901_07865 cdc117d01f1dbf692ecbf3d5f4e25507 193 Gene3D G3DSA:3.40.80.10 5 185 1.8E-54 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 SUPERFAMILY SSF56645 6 227 8.77E-53 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 244 365 5.7E-18 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 SUPERFAMILY SSF47203 233 383 3.54E-26 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 PIRSF PIRSF016578 5 367 4.3E-28 T 14-10-2018 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 Gene3D G3DSA:2.40.110.10 120 230 1.3E-22 T 14-10-2018 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 1.6E-16 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 115 1.2E-18 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 Gene3D G3DSA:1.10.540.10 6 118 9.5E-26 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C4901_13905 5c86af489860ab891d95c769973ab5e7 385 Gene3D G3DSA:1.20.140.10 231 384 1.1E-24 T 14-10-2018 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 SMART SM00228 133 205 5.5E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 SMART SM00228 230 299 3.4E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 SUPERFAMILY SSF50156 218 311 3.55E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 Gene3D G3DSA:2.30.42.10 145 239 1.4E-11 T 14-10-2018 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 148 201 4.5E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 Gene3D G3DSA:2.30.42.10 241 327 2.4E-16 T 14-10-2018 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 Pfam PF02163 Peptidase family M50 28 457 1.9E-73 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 SUPERFAMILY SSF50156 105 206 1.71E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_10400 15f4c5bc0e0c1b0e686f4aaa0cbccedd 471 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 23 470 6.9E-99 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 PIRSF PIRSF015589 1 689 4.6E-273 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 9 687 27.972 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 12 682 9.1E-280 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 Pfam PF02503 Polyphosphate kinase middle domain 127 327 1.5E-60 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 SUPERFAMILY SSF56024 322 497 8.16E-55 T 14-10-2018 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 SUPERFAMILY SSF56024 506 683 5.61E-69 T 14-10-2018 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 336 681 1.3E-147 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 SUPERFAMILY SSF143724 115 319 3.14E-63 T 14-10-2018 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 Gene3D G3DSA:3.30.1840.10 5 318 9.2E-103 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 12 118 6.3E-35 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 Gene3D G3DSA:3.30.870.10 506 688 2.7E-66 T 14-10-2018 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 Gene3D G3DSA:3.30.870.10 323 505 1.0E-67 T 14-10-2018 C4901_10180 d00bb9595525d02d01f772326ea244f3 689 SUPERFAMILY SSF140356 8 111 6.8E-35 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 C4901_04665 6847dba27139de05b2616d2311a363c0 824 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 249 298 2.1E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal C4901_04665 6847dba27139de05b2616d2311a363c0 824 Pfam PF03144 Elongation factor Tu domain 2 745 810 2.0E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C4901_04665 6847dba27139de05b2616d2311a363c0 824 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 327 483 2.2E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_04665 6847dba27139de05b2616d2311a363c0 824 SUPERFAMILY SSF50447 726 822 1.96E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_04665 6847dba27139de05b2616d2311a363c0 824 Gene3D G3DSA:3.40.50.300 322 494 9.6E-72 T 14-10-2018 C4901_04665 6847dba27139de05b2616d2311a363c0 824 SUPERFAMILY SSF52156 601 731 6.8E-37 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily C4901_04665 6847dba27139de05b2616d2311a363c0 824 SUPERFAMILY SSF50447 499 577 5.08E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_04665 6847dba27139de05b2616d2311a363c0 824 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 822 17.339 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 C4901_04665 6847dba27139de05b2616d2311a363c0 824 SUPERFAMILY SSF52540 321 490 6.58E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04665 6847dba27139de05b2616d2311a363c0 824 Gene3D G3DSA:2.40.30.10 726 823 2.7E-33 T 14-10-2018 C4901_04665 6847dba27139de05b2616d2311a363c0 824 SUPERFAMILY SSF46955 3 51 3.84E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_04665 6847dba27139de05b2616d2311a363c0 824 Pfam PF00009 Elongation factor Tu GTP binding domain 329 485 4.0E-34 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_04665 6847dba27139de05b2616d2311a363c0 824 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 243 824 1.0E-262 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 C4901_04665 6847dba27139de05b2616d2311a363c0 824 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 99 1.8E-10 T 14-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial C4901_04665 6847dba27139de05b2616d2311a363c0 824 Gene3D G3DSA:3.40.50.10050 618 725 5.8E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily C4901_04665 6847dba27139de05b2616d2311a363c0 824 Gene3D G3DSA:2.40.30.10 495 614 2.0E-37 T 14-10-2018 C4901_04665 6847dba27139de05b2616d2311a363c0 824 Gene3D G3DSA:3.30.56.50 2 51 1.5E-8 T 14-10-2018 C4901_04665 6847dba27139de05b2616d2311a363c0 824 Pfam PF11987 Translation-initiation factor 2 610 714 6.0E-38 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 Pfam PF00850 Histone deacetylase domain 32 315 1.1E-68 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 Gene3D G3DSA:3.40.800.20 6 378 3.9E-109 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 PRINTS PR01271 Histone deacetylase signature 61 79 1.3E-10 T 14-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 PRINTS PR01271 Histone deacetylase signature 152 168 1.3E-10 T 14-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 PRINTS PR01271 Histone deacetylase signature 230 248 1.3E-10 T 14-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 PRINTS PR01271 Histone deacetylase signature 213 226 1.3E-10 T 14-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 PRINTS PR01271 Histone deacetylase signature 28 45 1.3E-10 T 14-10-2018 IPR003084 Histone deacetylase GO:0004407|GO:0016575 Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862|Reactome: R-HSA-3214815 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 SUPERFAMILY SSF52768 9 341 5.76E-95 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 PRINTS PR01270 Histone deacetylase superfamily signature 165 180 3.6E-20 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 PRINTS PR01270 Histone deacetylase superfamily signature 252 262 3.6E-20 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C4901_12880 721ff7eb35d05701b2c63eaee9d946b5 388 PRINTS PR01270 Histone deacetylase superfamily signature 133 156 3.6E-20 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 C4901_06365 612d763e2f29f3c6f82973cf8f9706d6 125 Pfam PF01638 HxlR-like helix-turn-helix 23 111 5.8E-36 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type C4901_06365 612d763e2f29f3c6f82973cf8f9706d6 125 Gene3D G3DSA:1.10.10.10 7 120 1.3E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_06365 612d763e2f29f3c6f82973cf8f9706d6 125 SUPERFAMILY SSF46785 12 114 2.89E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_15425 36605d92eef44fadf3787454f3deeeb7 302 Gene3D G3DSA:3.30.1330.60 30 140 2.6E-8 T 14-10-2018 IPR036737 OmpA-like domain superfamily C4901_15425 36605d92eef44fadf3787454f3deeeb7 302 Pfam PF00691 OmpA family 57 120 3.1E-8 T 14-10-2018 IPR006665 OmpA-like domain C4901_15425 36605d92eef44fadf3787454f3deeeb7 302 SUPERFAMILY SSF103088 49 112 4.45E-9 T 14-10-2018 IPR036737 OmpA-like domain superfamily C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 Gene3D G3DSA:3.40.50.300 93 379 3.7E-128 T 14-10-2018 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 SUPERFAMILY SSF50615 10 93 1.96E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 363 372 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 91 9.3E-14 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 Gene3D G3DSA:2.40.30.20 1 92 7.5E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 372 2.4E-74 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 SUPERFAMILY SSF52540 95 378 3.92E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 Gene3D G3DSA:1.20.150.20 380 510 1.5E-40 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 379 504 9.5E-41 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 509 48.994 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 SUPERFAMILY SSF47917 380 506 2.62E-41 T 14-10-2018 C4901_17005 2de6ccf9a7ff5b9643419ce159d02dee 510 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 507 2.7E-236 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_12825 56e0dc7ed12b0c86f70ba3dbbb41d256 246 SUPERFAMILY SSF52317 4 206 1.16E-14 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_12825 56e0dc7ed12b0c86f70ba3dbbb41d256 246 Gene3D G3DSA:3.40.50.880 1 237 2.1E-25 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_08170 2e604dc31592a299a8223dd70281e2be 231 Gene3D G3DSA:3.40.50.1820 5 225 2.4E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_08170 2e604dc31592a299a8223dd70281e2be 231 SUPERFAMILY SSF53474 14 220 1.11E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_08170 2e604dc31592a299a8223dd70281e2be 231 Pfam PF02230 Phospholipase/Carboxylesterase 18 219 1.1E-52 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 C4901_08275 70d77885e452dd4c9b98dd24172d412a 451 SUPERFAMILY SSF56954 3 440 1.31E-29 T 14-10-2018 C4901_08275 70d77885e452dd4c9b98dd24172d412a 451 Gene3D G3DSA:1.20.1600.10 64 443 9.2E-23 T 14-10-2018 C4901_08275 70d77885e452dd4c9b98dd24172d412a 451 Pfam PF02321 Outer membrane efflux protein 272 434 8.2E-5 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_01045 a923677a4a640ba3888a8007ae52b013 682 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 2 681 25.347 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C4901_01045 a923677a4a640ba3888a8007ae52b013 682 TIGRFAM TIGR01104 V_PPase: V-type H(+)-translocating pyrophosphatase 7 680 1.2E-263 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C4901_01045 a923677a4a640ba3888a8007ae52b013 682 PIRSF PIRSF001265 1 682 1.9E-257 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C4901_01045 a923677a4a640ba3888a8007ae52b013 682 Pfam PF03030 Inorganic H+ pyrophosphatase 13 675 1.0E-262 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C4901_14670 eeaae2655737b35d94813a0a013e4fcd 405 Pfam PF14306 PUA-like domain 6 164 1.3E-55 T 14-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 C4901_14670 eeaae2655737b35d94813a0a013e4fcd 405 Pfam PF01747 ATP-sulfurylase 176 384 1.0E-84 T 14-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 C4901_14670 eeaae2655737b35d94813a0a013e4fcd 405 SUPERFAMILY SSF88697 5 170 1.39E-50 T 14-10-2018 IPR015947 PUA-like superfamily C4901_14670 eeaae2655737b35d94813a0a013e4fcd 405 SUPERFAMILY SSF52374 175 387 2.25E-79 T 14-10-2018 C4901_14670 eeaae2655737b35d94813a0a013e4fcd 405 Gene3D G3DSA:3.10.400.10 4 192 3.5E-62 T 14-10-2018 C4901_14670 eeaae2655737b35d94813a0a013e4fcd 405 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 7 384 5.0E-120 T 14-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 C4901_14670 eeaae2655737b35d94813a0a013e4fcd 405 Gene3D G3DSA:3.40.50.620 193 392 2.3E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_14670 eeaae2655737b35d94813a0a013e4fcd 405 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 29 388 44.612 T 14-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C4901_05500 6e884fffae3f588990a4c35d6dd93f3c 556 Gene3D G3DSA:3.90.870.20 343 547 4.2E-73 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily C4901_05500 6e884fffae3f588990a4c35d6dd93f3c 556 Pfam PF02543 Carbamoyltransferase N-terminus 100 327 4.3E-27 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 C4901_05500 6e884fffae3f588990a4c35d6dd93f3c 556 Gene3D G3DSA:3.30.420.350 101 320 4.1E-45 T 14-10-2018 C4901_05500 6e884fffae3f588990a4c35d6dd93f3c 556 Pfam PF16861 Carbamoyltransferase C-terminus 379 548 4.8E-63 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal C4901_05500 6e884fffae3f588990a4c35d6dd93f3c 556 Gene3D G3DSA:3.30.420.40 2 55 9.0E-6 T 14-10-2018 C4901_11960 4183aac288d398c77abe8bdaf161d8a8 163 Gene3D G3DSA:3.40.1260.10 36 161 1.9E-11 T 14-10-2018 IPR027396 DsrEFH-like C4901_11960 4183aac288d398c77abe8bdaf161d8a8 163 Pfam PF02635 DsrE/DsrF-like family 69 160 4.2E-5 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_11960 4183aac288d398c77abe8bdaf161d8a8 163 SUPERFAMILY SSF75169 63 161 3.0E-11 T 14-10-2018 IPR027396 DsrEFH-like C4901_14405 6a5a55e53366c91b0fed260d2b2bc260 222 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 3.2E-94 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C4901_14405 6a5a55e53366c91b0fed260d2b2bc260 222 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C4901_14405 6a5a55e53366c91b0fed260d2b2bc260 222 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 203 4.5E-87 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C4901_14405 6a5a55e53366c91b0fed260d2b2bc260 222 SUPERFAMILY SSF51366 4 218 4.66E-73 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C4901_14405 6a5a55e53366c91b0fed260d2b2bc260 222 Gene3D G3DSA:3.20.20.70 4 222 2.2E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_14405 6a5a55e53366c91b0fed260d2b2bc260 222 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C4901_14405 6a5a55e53366c91b0fed260d2b2bc260 222 PIRSF PIRSF001461 1 222 1.8E-101 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 PRINTS PR00125 ATP synthase delta subunit signature 134 149 2.0E-16 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 PRINTS PR00125 ATP synthase delta subunit signature 9 28 2.0E-16 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 PRINTS PR00125 ATP synthase delta subunit signature 149 167 2.0E-16 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 PRINTS PR00125 ATP synthase delta subunit signature 84 98 2.0E-16 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 PRINTS PR00125 ATP synthase delta subunit signature 73 84 2.0E-16 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 9 174 1.1E-37 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 Gene3D G3DSA:1.10.520.20 4 105 1.0E-12 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 5 176 17.053 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 9 174 1.3E-28 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 136 155 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17010 3710f862fa1f23810825bc7c9f96a57b 177 SUPERFAMILY SSF47928 5 104 5.49E-12 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 Gene3D G3DSA:3.10.290.10 342 410 5.7E-13 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 SUPERFAMILY SSF55174 343 409 5.59E-12 T 14-10-2018 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 59 81 2.0E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 224 236 2.0E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 174 189 2.0E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 191 213 2.0E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 Gene3D G3DSA:1.10.240.10 231 341 8.8E-31 T 14-10-2018 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 55 65 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 Pfam PF00579 tRNA synthetases class I (W and Y) 45 329 1.6E-71 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 SUPERFAMILY SSF52374 22 329 1.84E-93 T 14-10-2018 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 15 410 45.9 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 21 410 1.2E-113 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 C4901_14285 5d1cfd4e6ad75bbd7757bbcdc417a4de 415 Gene3D G3DSA:3.40.50.620 17 230 3.1E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_05345 b2e8b945c37d6b4d94df5ca289434b03 176 Gene3D G3DSA:3.10.180.10 33 170 5.2E-47 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_05345 b2e8b945c37d6b4d94df5ca289434b03 176 ProSitePatterns PS00935 Glyoxalase I signature 2. 113 125 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C4901_05345 b2e8b945c37d6b4d94df5ca289434b03 176 SUPERFAMILY SSF54593 37 171 1.1E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_05345 b2e8b945c37d6b4d94df5ca289434b03 176 ProSitePatterns PS00934 Glyoxalase I signature 1. 49 70 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C4901_05345 b2e8b945c37d6b4d94df5ca289434b03 176 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 46 167 5.2E-23 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C4901_05345 b2e8b945c37d6b4d94df5ca289434b03 176 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 39 171 1.2E-58 T 14-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 ProSitePatterns PS00194 Thioredoxin family active site. 29 47 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 Gene3D G3DSA:1.25.40.10 117 199 1.8E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 Pfam PF14561 Tetratricopeptide repeat 199 284 6.9E-20 T 14-10-2018 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 Gene3D G3DSA:3.40.30.10 2 110 3.7E-33 T 14-10-2018 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 Pfam PF14559 Tetratricopeptide repeat 128 193 1.2E-8 T 14-10-2018 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 TIGRFAM TIGR01068 thioredoxin: thioredoxin 12 111 5.1E-31 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 PRINTS PR00421 Thioredoxin family signature 36 45 4.6E-8 T 14-10-2018 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 PRINTS PR00421 Thioredoxin family signature 76 87 4.6E-8 T 14-10-2018 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 PRINTS PR00421 Thioredoxin family signature 28 36 4.6E-8 T 14-10-2018 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 SUPERFAMILY SSF52833 7 115 1.68E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 SUPERFAMILY SSF48452 117 250 2.36E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 Pfam PF00085 Thioredoxin 9 110 1.8E-27 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C4901_11750 29de7bc02fd62d741fe867355a9aa3cd 287 Gene3D G3DSA:1.25.40.10 200 286 3.6E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_14970 f632c5f0934106fd8cf6f80e134907f2 760 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 423 735 7.5E-95 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 C4901_14970 f632c5f0934106fd8cf6f80e134907f2 760 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 37 396 4.7E-64 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 C4901_13240 82fc3b0d46d07a0ac8fa2d4ac5fceee7 231 SUPERFAMILY SSF55874 44 215 1.3E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_13240 82fc3b0d46d07a0ac8fa2d4ac5fceee7 231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 172 190 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13240 82fc3b0d46d07a0ac8fa2d4ac5fceee7 231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 155 165 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13240 82fc3b0d46d07a0ac8fa2d4ac5fceee7 231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 137 151 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13240 82fc3b0d46d07a0ac8fa2d4ac5fceee7 231 PRINTS PR00344 Bacterial sensor protein C-terminal signature 196 209 1.2E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13240 82fc3b0d46d07a0ac8fa2d4ac5fceee7 231 SMART SM00387 100 212 2.6E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_13240 82fc3b0d46d07a0ac8fa2d4ac5fceee7 231 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 101 210 6.4E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_13240 82fc3b0d46d07a0ac8fa2d4ac5fceee7 231 Gene3D G3DSA:3.30.565.10 53 212 1.1E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 Gene3D G3DSA:3.30.930.10 105 423 4.7E-112 T 14-10-2018 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 420 39.009 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 PIRSF PIRSF001529 1 424 4.5E-159 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 SUPERFAMILY SSF46589 1 112 1.1E-23 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 3.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 3.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 3.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 3.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 3.5E-31 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 225 398 1.6E-28 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 415 1.8E-154 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 SUPERFAMILY SSF55681 117 416 1.02E-94 T 14-10-2018 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 Gene3D G3DSA:1.10.287.40 1 104 1.0E-15 T 14-10-2018 C4901_10300 d6e428d513ff360ddf585c7479bf20a0 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.0E-22 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 Gene3D G3DSA:3.30.450.40 6 183 6.0E-45 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 Pfam PF01590 GAF domain 29 170 1.5E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 SUPERFAMILY SSF55781 12 171 3.05E-22 T 14-10-2018 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 Pfam PF00158 Sigma-54 interaction domain 204 370 3.7E-74 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 Gene3D G3DSA:1.10.8.60 375 450 1.7E-23 T 14-10-2018 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 496 513 7.2E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 513 533 7.2E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 228 241 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 SMART SM00382 224 367 3.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 Pfam PF02954 Bacterial regulatory protein, Fis family 494 530 1.3E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 SMART SM00065 28 181 2.8E-26 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 TIGRFAM TIGR01817 nifA: Nif-specific regulatory protein 12 537 2.1E-215 T 14-10-2018 IPR010113 Nif-specific regulatory protein GO:0003700|GO:0006355|GO:0009399 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 Gene3D G3DSA:3.40.50.300 192 374 8.5E-72 T 14-10-2018 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 SUPERFAMILY SSF52540 203 444 6.46E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 Gene3D G3DSA:1.10.10.60 491 536 2.2E-8 T 14-10-2018 C4901_14860 9c472e41583c72f4c02c2b845bc6b509 537 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 SUPERFAMILY SSF52518 8 378 1.35E-81 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 Gene3D G3DSA:3.40.50.970 313 487 9.6E-67 T 14-10-2018 C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 8 617 46.954 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 616 8.8E-272 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 SUPERFAMILY SSF52518 314 501 3.23E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 ProSitePatterns PS00801 Transketolase signature 1. 34 53 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 9 280 2.2E-125 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 Pfam PF02780 Transketolase, C-terminal domain 492 608 1.9E-25 T 14-10-2018 IPR033248 Transketolase, C-terminal domain C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 Pfam PF02779 Transketolase, pyrimidine binding domain 317 476 1.9E-38 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 SMART SM00861 316 480 7.8E-69 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 SUPERFAMILY SSF52922 489 616 2.22E-31 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 Gene3D G3DSA:3.40.50.920 492 617 2.7E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C4901_04305 407acc4fcdf9a71f29395bbbf86efde8 626 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C4901_13280 8c66e56088a310229896892256d79d14 100 SUPERFAMILY SSF143120 20 64 2.75E-9 T 14-10-2018 IPR036165 YefM-like superfamily C4901_13280 8c66e56088a310229896892256d79d14 100 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 20 69 1.2E-11 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_13280 8c66e56088a310229896892256d79d14 100 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 20 64 1.0E-11 T 14-10-2018 C4901_13280 8c66e56088a310229896892256d79d14 100 Gene3D G3DSA:3.40.1620.10 17 66 1.7E-23 T 14-10-2018 C4901_01485 2956626734510fd59f9f8fe5e6485103 111 Gene3D G3DSA:1.10.260.40 10 80 3.5E-11 T 14-10-2018 C4901_01485 2956626734510fd59f9f8fe5e6485103 111 SUPERFAMILY SSF47413 13 71 1.83E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_01485 2956626734510fd59f9f8fe5e6485103 111 Pfam PF13560 Helix-turn-helix domain 18 74 2.2E-7 T 14-10-2018 C4901_09595 51effa18c9e2b9cc31431a1b91dae5d3 271 SUPERFAMILY SSF103481 37 127 1.96E-9 T 14-10-2018 C4901_09595 51effa18c9e2b9cc31431a1b91dae5d3 271 SUPERFAMILY SSF103481 175 268 9.15E-5 T 14-10-2018 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Gene3D G3DSA:3.40.50.300 419 593 6.2E-49 T 14-10-2018 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Pfam PF12344 Ultra-violet resistance protein B 556 597 5.8E-21 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Gene3D G3DSA:3.40.50.300 2 240 8.3E-70 T 14-10-2018 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Pfam PF00271 Helicase conserved C-terminal domain 446 548 6.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_05545 81544248bce8b7dc578da129637bf6c3 677 SUPERFAMILY SSF46600 620 664 9.02E-11 T 14-10-2018 IPR036876 UVR domain superfamily C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Gene3D G3DSA:3.40.50.300 278 418 5.8E-52 T 14-10-2018 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Gene3D G3DSA:4.10.860.10 614 667 1.0E-13 T 14-10-2018 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Hamap MF_00204 UvrABC system protein B [uvrB]. 8 664 42.666 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 SUPERFAMILY SSF52540 9 419 3.65E-133 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05545 81544248bce8b7dc578da129637bf6c3 677 SUPERFAMILY SSF52540 42 592 2.97E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Pfam PF02151 UvrB/uvrC motif 630 663 2.2E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 SMART SM00490 464 550 2.3E-20 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_05545 81544248bce8b7dc578da129637bf6c3 677 Pfam PF04851 Type III restriction enzyme, res subunit 22 97 2.7E-7 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 9 662 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 C4901_05545 81544248bce8b7dc578da129637bf6c3 677 SMART SM00487 14 430 2.8E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 SUPERFAMILY SSF81593 201 314 4.32E-12 T 14-10-2018 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 SMART SM00471 453 600 5.8E-9 T 14-10-2018 IPR003607 HD/PDEase domain C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 Pfam PF08335 GlnD PII-uridylyltransferase 181 320 2.0E-41 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 SUPERFAMILY SSF109604 424 558 5.34E-16 T 14-10-2018 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 Pfam PF01909 Nucleotidyltransferase domain 75 106 4.2E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 43 865 4.2E-269 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 Pfam PF01966 HD domain 457 586 1.1E-11 T 14-10-2018 IPR006674 HD domain C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 PIRSF PIRSF006288 4 880 1.9E-292 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 SUPERFAMILY SSF55021 799 868 8.5E-7 T 14-10-2018 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 Gene3D G3DSA:1.20.120.330 175 323 3.4E-6 T 14-10-2018 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 882 280.85 T 14-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 SUPERFAMILY SSF81301 46 177 1.41E-21 T 14-10-2018 C4901_10445 0ffcb25eaa75a668df8442baaf957a68 882 Gene3D G3DSA:1.10.3210.10 442 586 2.1E-9 T 14-10-2018 C4901_10110 6f57499757dec57b6dea6065b752fdf6 840 Pfam PF12288 Carboxysome shell peptide mid-region 506 610 9.0E-23 T 14-10-2018 IPR020990 Carboxysome shell protein C4901_10110 6f57499757dec57b6dea6065b752fdf6 840 Pfam PF12288 Carboxysome shell peptide mid-region 146 500 4.7E-100 T 14-10-2018 IPR020990 Carboxysome shell protein C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 134 254 8.0E-29 T 14-10-2018 IPR000014 PAS domain C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 256 372 9.8E-7 T 14-10-2018 IPR000014 PAS domain C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SUPERFAMILY SSF47384 377 445 7.26E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Gene3D G3DSA:3.30.450.20 18 117 1.0E-12 T 14-10-2018 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Pfam PF08448 PAS fold 265 368 3.2E-10 T 14-10-2018 IPR013656 PAS fold-4 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 7.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 548 7.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 562 7.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 7.7E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Pfam PF00072 Response regulator receiver domain 622 732 5.1E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Pfam PF00989 PAS fold 134 244 1.5E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Pfam PF13426 PAS domain 28 113 4.0E-6 T 14-10-2018 IPR000014 PAS domain C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SUPERFAMILY SSF55785 243 358 3.14E-15 T 14-10-2018 IPR035965 PAS domain superfamily C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SMART SM00086 205 247 0.0015 T 14-10-2018 IPR001610 PAC motif C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SMART SM00086 78 120 64.0 T 14-10-2018 IPR001610 PAC motif C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SMART SM00086 327 366 300.0 T 14-10-2018 IPR001610 PAC motif C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 486 601 6.1E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Gene3D G3DSA:3.30.450.20 121 256 1.3E-31 T 14-10-2018 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SMART SM00448 620 732 4.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SMART SM00387 486 603 6.7E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Gene3D G3DSA:1.10.287.130 377 445 5.2E-13 T 14-10-2018 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SUPERFAMILY SSF52172 618 738 1.28E-24 T 14-10-2018 IPR011006 CheY-like superfamily C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SUPERFAMILY SSF55785 144 256 7.4E-26 T 14-10-2018 IPR035965 PAS domain superfamily C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Gene3D G3DSA:3.40.50.2300 618 737 1.1E-22 T 14-10-2018 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Gene3D G3DSA:3.30.450.20 257 376 9.9E-17 T 14-10-2018 C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SMART SM00091 133 199 1.7E-8 T 14-10-2018 IPR000014 PAS domain C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SMART SM00091 259 324 0.0079 T 14-10-2018 IPR000014 PAS domain C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SMART SM00091 11 81 1.1 T 14-10-2018 IPR000014 PAS domain C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SUPERFAMILY SSF55785 19 111 3.66E-13 T 14-10-2018 IPR035965 PAS domain superfamily C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 SUPERFAMILY SSF55874 453 600 3.41E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_06990 3a05668d9752bb0a19c447e0a7e5834e 759 Gene3D G3DSA:3.30.565.10 447 609 1.3E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_07660 8e6a34df8d2c2fa95545d463d9f51b42 1101 Pfam PF13361 UvrD-like helicase C-terminal domain 739 835 2.8E-10 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C4901_07660 8e6a34df8d2c2fa95545d463d9f51b42 1101 Gene3D G3DSA:3.40.50.300 4 171 7.1E-27 T 14-10-2018 C4901_07660 8e6a34df8d2c2fa95545d463d9f51b42 1101 Pfam PF00580 UvrD/REP helicase N-terminal domain 14 454 7.5E-41 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C4901_07660 8e6a34df8d2c2fa95545d463d9f51b42 1101 Gene3D G3DSA:3.40.50.300 347 489 8.3E-29 T 14-10-2018 C4901_07660 8e6a34df8d2c2fa95545d463d9f51b42 1101 Gene3D G3DSA:3.40.50.300 526 620 2.4E-9 T 14-10-2018 C4901_07660 8e6a34df8d2c2fa95545d463d9f51b42 1101 SUPERFAMILY SSF52540 8 844 6.31E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07660 8e6a34df8d2c2fa95545d463d9f51b42 1101 Pfam PF12705 PD-(D/E)XK nuclease superfamily 924 1070 9.2E-9 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type C4901_10320 57674264e639d0ce6b78068bcce6408a 116 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 108 5.5E-6 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10320 57674264e639d0ce6b78068bcce6408a 116 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 12 115 3.9E-20 T 14-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 C4901_10320 57674264e639d0ce6b78068bcce6408a 116 SUPERFAMILY SSF81343 6 115 1.96E-17 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10320 57674264e639d0ce6b78068bcce6408a 116 Gene3D G3DSA:1.20.1300.10 5 116 5.3E-19 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_12300 b2279fb5e6c6751abe7c0d5b2dc45636 421 SUPERFAMILY SSF103473 1 415 7.06E-66 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_12300 b2279fb5e6c6751abe7c0d5b2dc45636 421 Gene3D G3DSA:1.20.1250.20 1 419 1.6E-79 T 14-10-2018 C4901_12300 b2279fb5e6c6751abe7c0d5b2dc45636 421 Pfam PF00083 Sugar (and other) transporter 29 417 3.0E-45 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 SUPERFAMILY SSF55781 649 797 9.38E-12 T 14-10-2018 C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 Pfam PF00563 EAL domain 971 1203 5.5E-46 T 14-10-2018 IPR001633 EAL domain C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 SMART SM00065 464 625 0.049 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 SMART SM00065 646 796 0.069 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 Pfam PF13185 GAF domain 649 786 1.8E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 Pfam PF13185 GAF domain 464 615 1.0E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 SMART SM00052 965 1208 3.3E-38 T 14-10-2018 IPR001633 EAL domain C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 797 954 7.7E-32 T 14-10-2018 IPR000160 GGDEF domain C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 800 951 3.6E-35 T 14-10-2018 IPR000160 GGDEF domain C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 SUPERFAMILY SSF55781 431 615 2.62E-11 T 14-10-2018 C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 SUPERFAMILY SSF141868 972 1217 5.1E-54 T 14-10-2018 IPR035919 EAL domain superfamily C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 Gene3D G3DSA:3.30.70.270 797 957 5.4E-45 T 14-10-2018 C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 Gene3D G3DSA:3.30.450.40 620 796 2.1E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 SMART SM00267 788 955 5.0E-44 T 14-10-2018 IPR000160 GGDEF domain C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 SUPERFAMILY SSF55073 804 956 6.67E-38 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 Gene3D G3DSA:3.30.450.40 444 619 6.9E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_03340 0fbeabac24e155846f7fdbebc318c61e 1323 Gene3D G3DSA:3.20.20.450 969 1217 8.5E-58 T 14-10-2018 IPR035919 EAL domain superfamily C4901_12240 a26cdeb69fa5aea247666d24789e34b0 122 SUPERFAMILY SSF159127 1 73 2.75E-10 T 14-10-2018 IPR037254 HupF/HypC superfamily C4901_12240 a26cdeb69fa5aea247666d24789e34b0 122 Pfam PF01455 HupF/HypC family 1 65 3.4E-8 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C4901_12240 a26cdeb69fa5aea247666d24789e34b0 122 Gene3D G3DSA:2.40.50.970 1 74 2.8E-5 T 14-10-2018 IPR037254 HupF/HypC superfamily C4901_02620 651230d93aae063946992a245b3c2153 452 Pfam PF07885 Ion channel 212 279 1.2E-12 T 14-10-2018 IPR013099 Potassium channel domain C4901_02620 651230d93aae063946992a245b3c2153 452 SUPERFAMILY SSF51735 302 432 2.03E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_02620 651230d93aae063946992a245b3c2153 452 Gene3D G3DSA:1.10.287.70 195 281 4.2E-16 T 14-10-2018 C4901_02620 651230d93aae063946992a245b3c2153 452 Pfam PF02254 TrkA-N domain 305 417 1.9E-16 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 C4901_02620 651230d93aae063946992a245b3c2153 452 SUPERFAMILY SSF81324 185 325 5.76E-19 T 14-10-2018 C4901_02620 651230d93aae063946992a245b3c2153 452 Gene3D G3DSA:3.40.50.720 300 446 8.1E-31 T 14-10-2018 C4901_17040 73e2e0c087016bf8521ab5d2891a32b4 283 SUPERFAMILY SSF110849 32 166 3.03E-34 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily C4901_17040 73e2e0c087016bf8521ab5d2891a32b4 283 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 33 206 4.0E-56 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 C4901_17040 73e2e0c087016bf8521ab5d2891a32b4 283 Gene3D G3DSA:3.90.1530.30 46 108 9.7E-28 T 14-10-2018 C4901_17040 73e2e0c087016bf8521ab5d2891a32b4 283 Pfam PF02195 ParB-like nuclease domain 35 122 2.0E-28 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C4901_17040 73e2e0c087016bf8521ab5d2891a32b4 283 SMART SM00470 33 122 4.8E-38 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C4901_17040 73e2e0c087016bf8521ab5d2891a32b4 283 Gene3D G3DSA:1.10.10.2830 109 223 6.9E-37 T 14-10-2018 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 SUPERFAMILY SSF55874 97 262 1.44E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 Gene3D G3DSA:1.10.287.130 32 103 2.2E-14 T 14-10-2018 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 Gene3D G3DSA:3.40.50.2300 282 408 8.7E-24 T 14-10-2018 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 SUPERFAMILY SSF52172 283 400 9.82E-24 T 14-10-2018 IPR011006 CheY-like superfamily C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 146 262 1.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 SUPERFAMILY SSF47384 36 104 1.37E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 SMART SM00448 282 399 1.5E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 Gene3D G3DSA:3.30.565.10 112 267 1.8E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 Pfam PF00072 Response regulator receiver domain 285 398 3.3E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 SMART SM00387 145 264 1.7E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 224 242 8.9E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 195 209 8.9E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 248 261 8.9E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05230 0eb5ac066749cc05aad0e97591a0919f 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 213 223 8.9E-19 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_07525 84f8266d1d393b5360dd45b39b4deccf 456 Pfam PF01609 Transposase DDE domain 135 363 7.7E-16 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_07525 84f8266d1d393b5360dd45b39b4deccf 456 SUPERFAMILY SSF53098 130 374 1.9E-19 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_01510 84f8266d1d393b5360dd45b39b4deccf 456 Pfam PF01609 Transposase DDE domain 135 363 7.7E-16 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_01510 84f8266d1d393b5360dd45b39b4deccf 456 SUPERFAMILY SSF53098 130 374 1.9E-19 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_00155 84f8266d1d393b5360dd45b39b4deccf 456 Pfam PF01609 Transposase DDE domain 135 363 7.7E-16 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_00155 84f8266d1d393b5360dd45b39b4deccf 456 SUPERFAMILY SSF53098 130 374 1.9E-19 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_01530 75212b2e308ecc9d3640114531ef8328 82 SUPERFAMILY SSF52833 2 75 1.01E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_01530 75212b2e308ecc9d3640114531ef8328 82 Pfam PF05768 Glutaredoxin-like domain (DUF836) 3 72 6.6E-16 T 14-10-2018 IPR008554 Glutaredoxin-like C4901_01530 75212b2e308ecc9d3640114531ef8328 82 Gene3D G3DSA:3.40.30.10 1 75 5.4E-20 T 14-10-2018 C4901_08820 7d590e2e9e4f71d5be775450faabd9f7 339 Gene3D G3DSA:3.40.718.10 1 336 4.8E-132 T 14-10-2018 C4901_08820 7d590e2e9e4f71d5be775450faabd9f7 339 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 4 331 9.0E-111 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 C4901_08820 7d590e2e9e4f71d5be775450faabd9f7 339 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 339 150.489 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 C4901_08820 7d590e2e9e4f71d5be775450faabd9f7 339 Pfam PF02504 Fatty acid synthesis protein 4 323 4.7E-107 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 C4901_08820 7d590e2e9e4f71d5be775450faabd9f7 339 SUPERFAMILY SSF53659 3 331 3.95E-108 T 14-10-2018 C4901_08820 7d590e2e9e4f71d5be775450faabd9f7 339 PIRSF PIRSF002465 1 335 1.6E-128 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 C4901_12085 62d1739ac9653c290098bdb227544095 389 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 191 213 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site C4901_12085 62d1739ac9653c290098bdb227544095 389 Gene3D G3DSA:3.30.70.260 308 387 4.2E-15 T 14-10-2018 C4901_12085 62d1739ac9653c290098bdb227544095 389 Gene3D G3DSA:3.40.50.720 84 278 6.8E-67 T 14-10-2018 C4901_12085 62d1739ac9653c290098bdb227544095 389 Gene3D G3DSA:3.40.50.720 28 303 6.8E-67 T 14-10-2018 C4901_12085 62d1739ac9653c290098bdb227544095 389 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 125 274 7.6E-34 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 C4901_12085 62d1739ac9653c290098bdb227544095 389 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 140 167 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 C4901_12085 62d1739ac9653c290098bdb227544095 389 SUPERFAMILY SSF51735 86 274 2.2E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_12085 62d1739ac9653c290098bdb227544095 389 SUPERFAMILY SSF55021 308 387 1.17E-12 T 14-10-2018 C4901_12085 62d1739ac9653c290098bdb227544095 389 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 27 306 2.3E-20 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 C4901_12085 62d1739ac9653c290098bdb227544095 389 SUPERFAMILY SSF52283 28 105 4.91E-19 T 14-10-2018 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 SMART SM00382 99 406 1.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 SUPERFAMILY SSF52540 42 352 3.72E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 Pfam PF02978 Signal peptide binding domain 329 427 3.2E-30 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.28 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 Gene3D G3DSA:3.40.50.300 90 285 9.7E-118 T 14-10-2018 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 Gene3D G3DSA:1.10.260.30 328 448 2.7E-40 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.0E-69 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 SMART SM00963 1 86 3.4E-33 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.8E-20 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 SUPERFAMILY SSF47446 298 431 2.49E-42 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 5.1E-166 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 SMART SM00962 100 296 2.2E-107 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_10900 e5d8b62d36a991787b4da32430987b7b 451 Gene3D G3DSA:1.20.120.140 5 305 9.7E-118 T 14-10-2018 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 420 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 358 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 235 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 318 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 449 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 479 500 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 197 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 116 139 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 265 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 167 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 388 1.0E-75 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 299 353 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 514 2.1E-122 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 Gene3D G3DSA:1.20.210.10 54 580 6.3E-162 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05480 1ec902ee3404dcf881491d78259a0d0e 702 SUPERFAMILY SSF81442 54 579 1.44E-150 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04635 465659362473b2cff0f688cb8d3d3f0d 800 Gene3D G3DSA:2.170.130.10 65 204 4.2E-10 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C4901_04635 465659362473b2cff0f688cb8d3d3f0d 800 SUPERFAMILY SSF56935 43 800 8.42E-68 T 14-10-2018 C4901_04635 465659362473b2cff0f688cb8d3d3f0d 800 Pfam PF00593 TonB dependent receptor 351 799 5.7E-32 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C4901_04635 465659362473b2cff0f688cb8d3d3f0d 800 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 187 1.1E-7 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C4901_04635 465659362473b2cff0f688cb8d3d3f0d 800 Gene3D G3DSA:2.40.170.20 215 800 9.1E-47 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C4901_04635 465659362473b2cff0f688cb8d3d3f0d 800 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 783 800 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site C4901_01255 c431e68eaee0470cfba6b365d308ac9c 80 SUPERFAMILY SSF64307 5 63 3.79E-5 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_01255 c431e68eaee0470cfba6b365d308ac9c 80 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 6 73 7.8E-13 T 14-10-2018 IPR018720 Domain of unknown function DUF2249 C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 266 2.9E-74 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 SUPERFAMILY SSF48179 161 269 7.48E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 Gene3D G3DSA:3.40.50.720 3 163 9.1E-46 T 14-10-2018 C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 266 24.606 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 98 4.0E-15 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 5.4E-32 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 PIRSF PIRSF000193 3 269 5.0E-74 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 Gene3D G3DSA:1.10.3730.10 164 270 3.6E-34 T 14-10-2018 C4901_14605 1f53e1835ea9f01e6936a3e82e359918 273 SUPERFAMILY SSF51735 6 159 4.36E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 Gene3D G3DSA:3.50.50.60 524 604 1.6E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 Gene3D G3DSA:3.50.50.60 398 523 1.6E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 419 1.5E-7 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 561 585 1.5E-7 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 SUPERFAMILY SSF63380 853 952 6.38E-11 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 Gene3D G3DSA:3.50.50.60 650 740 2.6E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 SUPERFAMILY SSF51971 395 739 2.79E-18 T 14-10-2018 C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 Gene3D G3DSA:2.40.30.10 853 952 2.5E-9 T 14-10-2018 C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 398 417 1.4E-7 T 14-10-2018 C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 565 583 1.4E-7 T 14-10-2018 C4901_05030 96321a5f0c25dd08b5236ca05e53751f 1180 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 397 598 1.3E-9 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_03980 9351fd5a8e834f4802e43964acca6394 451 Pfam PF03573 outer membrane porin, OprD family 152 450 9.1E-14 T 14-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 C4901_03980 9351fd5a8e834f4802e43964acca6394 451 Gene3D G3DSA:2.40.160.10 49 451 4.2E-30 T 14-10-2018 IPR023614 Porin domain superfamily C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 395 1.6E-14 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 Gene3D G3DSA:3.30.50.30 3 53 1.7E-24 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 Pfam PF07724 AAA domain (Cdc48 subfamily) 114 311 3.8E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 Gene3D G3DSA:3.40.50.300 59 316 2.9E-111 T 14-10-2018 C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 SMART SM01086 318 413 4.9E-32 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 SUPERFAMILY SSF52540 64 401 4.4E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 Gene3D G3DSA:1.10.8.60 317 424 2.6E-39 T 14-10-2018 C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 SMART SM00382 113 334 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 SUPERFAMILY SSF57716 14 49 2.14E-11 T 14-10-2018 C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 SMART SM00994 13 52 4.0E-23 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 12 413 1.3E-204 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 Pfam PF06689 ClpX C4-type zinc finger 14 51 1.9E-19 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 C4901_05785 f21f7c7a9d56c7f54cb1a321252afa71 430 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 416 53.367 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 6.5E-61 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 Gene3D G3DSA:3.90.1170.10 1 137 3.1E-56 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.606 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 SUPERFAMILY SSF54686 1 134 5.89E-56 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.0E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.0E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.0E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.0E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14090 7d69b8c74b482cac77748deea4d2e377 137 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.2E-50 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 Gene3D G3DSA:2.20.28.60 20 59 3.8E-12 T 14-10-2018 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 PIRSF PIRSF001369 47 434 7.0E-153 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 Pfam PF00285 Citrate synthase, C-terminal domain 55 421 2.1E-129 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 PRINTS PR00143 Citrate synthase signature 174 187 7.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 PRINTS PR00143 Citrate synthase signature 250 278 7.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 PRINTS PR00143 Citrate synthase signature 389 403 7.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 PRINTS PR00143 Citrate synthase signature 305 325 7.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 PRINTS PR00143 Citrate synthase signature 228 243 7.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 PRINTS PR00143 Citrate synthase signature 369 385 7.2E-53 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 SUPERFAMILY SSF48256 21 432 7.2E-154 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 25 432 4.3E-202 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 Gene3D G3DSA:1.10.230.10 277 386 1.2E-138 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain C4901_08100 823e3186e954d556eb870ad5cb0c6b4e 435 Gene3D G3DSA:1.10.580.10 66 421 1.2E-138 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C4901_05900 d9bbbe56894508931886bf76c5f4b8f4 479 SUPERFAMILY SSF53756 7 477 2.64E-120 T 14-10-2018 C4901_05900 d9bbbe56894508931886bf76c5f4b8f4 479 Pfam PF08323 Starch synthase catalytic domain 7 237 6.8E-73 T 14-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 C4901_05900 d9bbbe56894508931886bf76c5f4b8f4 479 Gene3D G3DSA:3.40.50.2000 8 473 1.6E-172 T 14-10-2018 C4901_05900 d9bbbe56894508931886bf76c5f4b8f4 479 Hamap MF_00484 Glycogen synthase [glgA]. 6 475 43.701 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 C4901_05900 d9bbbe56894508931886bf76c5f4b8f4 479 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 474 2.4E-165 T 14-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 C4901_05900 d9bbbe56894508931886bf76c5f4b8f4 479 Gene3D G3DSA:3.40.50.2000 251 459 1.6E-172 T 14-10-2018 C4901_05900 d9bbbe56894508931886bf76c5f4b8f4 479 Pfam PF00534 Glycosyl transferases group 1 285 442 1.3E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 SUPERFAMILY SSF53244 309 457 5.31E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 400 1.0E-20 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 SUPERFAMILY SSF53623 90 308 3.79E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 4 461 42.947 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 Gene3D G3DSA:3.90.190.20 308 462 1.3E-46 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 SUPERFAMILY SSF51984 5 91 1.96E-26 T 14-10-2018 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 Pfam PF01225 Mur ligase family, catalytic domain 6 103 5.5E-24 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 Pfam PF08245 Mur ligase middle domain 109 289 1.8E-28 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 Gene3D G3DSA:3.40.50.720 6 91 5.3E-29 T 14-10-2018 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 Gene3D G3DSA:3.40.1190.10 93 307 6.4E-81 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_03405 91f0bc3a07919bfa1a80c637f3b60b58 463 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 6 452 9.6E-168 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 Gene3D G3DSA:2.40.30.10 208 336 7.4E-54 T 14-10-2018 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 148 9.2E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 Gene3D G3DSA:3.40.50.300 1 205 2.0E-72 T 14-10-2018 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 SUPERFAMILY SSF50465 304 396 8.63E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.845 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 3.5E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.7E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 9.7E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 SUPERFAMILY SSF52540 5 221 9.4E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 396 3.3E-227 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 SUPERFAMILY SSF50447 207 303 4.52E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_14205 a5e508748cca955f39b61cb0cf603ab9 396 Gene3D G3DSA:2.40.30.10 340 395 1.4E-28 T 14-10-2018 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 Gene3D G3DSA:2.40.30.10 208 336 7.4E-54 T 14-10-2018 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 131 140 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 4.7E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 148 9.2E-15 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 Gene3D G3DSA:3.40.50.300 1 205 2.0E-72 T 14-10-2018 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 SUPERFAMILY SSF50465 304 396 8.63E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 59.845 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 Pfam PF03144 Elongation factor Tu domain 2 227 296 3.5E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 203 2.7E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 9.7E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 SUPERFAMILY SSF52540 5 221 9.4E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 396 3.3E-227 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 SUPERFAMILY SSF50447 207 303 4.52E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_14135 a5e508748cca955f39b61cb0cf603ab9 396 Gene3D G3DSA:2.40.30.10 340 395 1.4E-28 T 14-10-2018 C4901_05870 ce5b1f39d8b05f0865d170c42ebd374a 258 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 85 118 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_05870 ce5b1f39d8b05f0865d170c42ebd374a 258 SUPERFAMILY SSF53790 7 241 1.44E-67 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C4901_05870 ce5b1f39d8b05f0865d170c42ebd374a 258 Gene3D G3DSA:3.30.950.10 121 255 3.6E-40 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C4901_05870 ce5b1f39d8b05f0865d170c42ebd374a 258 Gene3D G3DSA:3.40.1010.10 5 120 1.4E-39 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C4901_05870 ce5b1f39d8b05f0865d170c42ebd374a 258 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 7 239 5.7E-85 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_05870 ce5b1f39d8b05f0865d170c42ebd374a 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 215 1.6E-41 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 SUPERFAMILY SSF53067 4 184 5.47E-67 T 14-10-2018 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 Gene3D G3DSA:3.90.640.10 229 316 4.0E-167 T 14-10-2018 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 469 485 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 54 62 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 198 208 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 365 385 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 334 350 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 388 407 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 PRINTS PR00301 70kDa heat shock protein signature 138 158 1.4E-81 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 1.0E-294 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 Pfam PF00012 Hsp70 protein 4 603 5.2E-268 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 Gene3D G3DSA:3.30.420.40 180 366 4.0E-167 T 14-10-2018 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 637 37.268 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 SUPERFAMILY SSF100934 507 611 1.67E-20 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 SUPERFAMILY SSF53067 187 382 8.64E-68 T 14-10-2018 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 SUPERFAMILY SSF100920 384 540 2.88E-62 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 Gene3D G3DSA:3.30.420.40 5 379 4.0E-167 T 14-10-2018 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 Gene3D G3DSA:2.60.34.10 383 523 3.6E-65 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C4901_04480 1e7a138bfa34b21175c950694a6dafdc 644 Gene3D G3DSA:1.20.1270.10 524 607 2.2E-27 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 Gene3D G3DSA:2.60.40.420 173 338 1.1E-39 T 14-10-2018 IPR008972 Cupredoxin C4901_10140 bacab572994420803e39a86f1a13e5fb 340 SUPERFAMILY SSF49503 41 178 4.82E-36 T 14-10-2018 IPR008972 Cupredoxin C4901_10140 bacab572994420803e39a86f1a13e5fb 340 TIGRFAM TIGR02376 Cu_nitrite_red: nitrite reductase, copper-containing 33 334 1.9E-112 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 SUPERFAMILY SSF49503 172 333 1.35E-40 T 14-10-2018 IPR008972 Cupredoxin C4901_10140 bacab572994420803e39a86f1a13e5fb 340 PRINTS PR00695 Copper containing nitrite reductase signature 111 130 4.6E-30 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 PRINTS PR00695 Copper containing nitrite reductase signature 76 92 4.6E-30 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 PRINTS PR00695 Copper containing nitrite reductase signature 94 111 4.6E-30 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 PRINTS PR00695 Copper containing nitrite reductase signature 153 169 4.6E-30 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 PRINTS PR00695 Copper containing nitrite reductase signature 50 68 4.6E-30 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 PRINTS PR00695 Copper containing nitrite reductase signature 136 151 4.6E-30 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 Pfam PF07732 Multicopper oxidase 70 172 1.0E-11 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 C4901_10140 bacab572994420803e39a86f1a13e5fb 340 Gene3D G3DSA:2.60.40.420 25 172 2.9E-41 T 14-10-2018 IPR008972 Cupredoxin C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 SUPERFAMILY SSF100920 380 532 4.71E-48 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 Gene3D G3DSA:2.60.34.10 376 515 5.8E-48 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 22 610 3.9E-257 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 SUPERFAMILY SSF53067 21 195 3.89E-49 T 14-10-2018 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 SUPERFAMILY SSF53067 197 372 2.13E-45 T 14-10-2018 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 PRINTS PR00301 70kDa heat shock protein signature 208 218 1.4E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 PRINTS PR00301 70kDa heat shock protein signature 356 376 1.4E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 PRINTS PR00301 70kDa heat shock protein signature 381 400 1.4E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.4E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.4E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 PRINTS PR00301 70kDa heat shock protein signature 325 341 1.4E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 PRINTS PR00301 70kDa heat shock protein signature 149 169 1.4E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 PRINTS PR00301 70kDa heat shock protein signature 462 478 1.4E-52 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 Gene3D G3DSA:3.90.640.10 235 307 1.1E-104 T 14-10-2018 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 Gene3D G3DSA:3.30.420.40 23 370 1.1E-104 T 14-10-2018 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 Pfam PF00012 Hsp70 protein 21 594 6.4E-166 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 Gene3D G3DSA:1.20.1270.10 516 611 4.2E-25 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 612 40.65 T 14-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 202 215 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 Gene3D G3DSA:3.30.420.40 191 357 1.1E-104 T 14-10-2018 C4901_10840 53c67e5aaf015a23a15581072141d0c9 613 SUPERFAMILY SSF100934 500 610 8.24E-32 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 C4901_13775 6b2d3c59810cad09a985903f170d7070 303 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 3 297 16.993 T 14-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 C4901_13775 6b2d3c59810cad09a985903f170d7070 303 Pfam PF13525 Outer membrane lipoprotein 175 258 2.5E-9 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like C4901_13775 6b2d3c59810cad09a985903f170d7070 303 SUPERFAMILY SSF48452 174 288 2.74E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_13775 6b2d3c59810cad09a985903f170d7070 303 Gene3D G3DSA:1.25.40.10 177 299 3.5E-27 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_13775 6b2d3c59810cad09a985903f170d7070 303 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 178 293 4.2E-33 T 14-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 388 444 9.0E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Gene3D G3DSA:3.40.120.10 3 155 1.6E-46 T 14-10-2018 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 136 1.8E-42 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Gene3D G3DSA:3.40.120.10 175 363 6.8E-64 T 14-10-2018 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 2 448 46.834 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 SUPERFAMILY SSF53738 157 258 1.14E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 SUPERFAMILY SSF53738 3 182 2.2E-47 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 6 446 3.8E-186 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Gene3D G3DSA:3.40.120.10 258 340 6.8E-64 T 14-10-2018 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 366 1.5E-30 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Gene3D G3DSA:3.30.310.50 371 451 3.0E-19 T 14-10-2018 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 4.6E-19 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 SUPERFAMILY SSF55957 359 449 3.53E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 5.4E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 5.4E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 5.4E-14 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04535 bc5479bca74c9efb0e8b57da9c523e8c 455 SUPERFAMILY SSF53738 259 366 2.35E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_16515 ff6bc374813c1a965f546d46b979fa15 513 Pfam PF02321 Outer membrane efflux protein 306 483 1.0E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_16515 ff6bc374813c1a965f546d46b979fa15 513 Pfam PF02321 Outer membrane efflux protein 85 274 1.0E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_16515 ff6bc374813c1a965f546d46b979fa15 513 Gene3D G3DSA:2.20.200.10 122 374 1.3E-109 T 14-10-2018 C4901_16515 ff6bc374813c1a965f546d46b979fa15 513 Gene3D G3DSA:1.20.1600.10 75 484 1.3E-109 T 14-10-2018 C4901_16515 ff6bc374813c1a965f546d46b979fa15 513 SUPERFAMILY SSF56954 16 485 1.57E-94 T 14-10-2018 C4901_16515 ff6bc374813c1a965f546d46b979fa15 513 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 484 2.0E-118 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 13 294 4.1E-75 T 14-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 SUPERFAMILY SSF52540 315 543 2.51E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 Gene3D G3DSA:3.40.50.300 310 583 4.1E-64 T 14-10-2018 C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 SMART SM00382 326 519 0.0089 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 SMART SM00382 8 227 0.24 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 Pfam PF02374 Anion-transporting ATPase 485 582 7.9E-5 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 Pfam PF02374 Anion-transporting ATPase 10 293 1.1E-72 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 Pfam PF02374 Anion-transporting ATPase 329 466 4.7E-26 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 PIRSF PIRSF001327 1 586 2.2E-248 T 14-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 SUPERFAMILY SSF52540 6 291 1.2E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 Gene3D G3DSA:3.40.50.300 2 296 1.4E-82 T 14-10-2018 C4901_08920 8653d6d9cf9bb74c444ebb532f9923d8 592 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 8 571 4.8E-258 T 14-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 C4901_02970 b837d19e498e3bc41c97dc530d7d788c 140 Gene3D G3DSA:3.40.50.510 1 136 6.4E-31 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 C4901_02970 b837d19e498e3bc41c97dc530d7d788c 140 SUPERFAMILY SSF53062 1 127 1.57E-27 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 C4901_02970 b837d19e498e3bc41c97dc530d7d788c 140 Pfam PF03610 PTS system fructose IIA component 11 104 1.2E-14 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 C4901_10630 dd804b1042138a7c6d6decf87aebe38c 340 SUPERFAMILY SSF55781 30 174 4.8E-9 T 14-10-2018 C4901_10630 dd804b1042138a7c6d6decf87aebe38c 340 Gene3D G3DSA:3.30.450.40 15 172 6.1E-10 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_10630 dd804b1042138a7c6d6decf87aebe38c 340 Gene3D G3DSA:3.30.70.270 173 334 4.8E-39 T 14-10-2018 C4901_10630 dd804b1042138a7c6d6decf87aebe38c 340 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 328 7.7E-31 T 14-10-2018 IPR000160 GGDEF domain C4901_10630 dd804b1042138a7c6d6decf87aebe38c 340 SMART SM00267 168 334 2.0E-36 T 14-10-2018 IPR000160 GGDEF domain C4901_10630 dd804b1042138a7c6d6decf87aebe38c 340 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 328 4.6E-31 T 14-10-2018 IPR000160 GGDEF domain C4901_10630 dd804b1042138a7c6d6decf87aebe38c 340 SUPERFAMILY SSF55073 184 329 5.1E-30 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_10630 dd804b1042138a7c6d6decf87aebe38c 340 SMART SM00065 30 176 1.1E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 Pfam PF00196 Bacterial regulatory proteins, luxR family 101 155 1.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 Pfam PF00072 Response regulator receiver domain 32 79 3.0E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 Gene3D G3DSA:1.10.10.10 103 158 2.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 116 132 1.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 102 116 1.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 132 144 1.7E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 SMART SM00421 99 156 1.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 Gene3D G3DSA:3.40.50.2300 26 102 6.3E-9 T 14-10-2018 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 SUPERFAMILY SSF46894 97 156 1.16E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C4901_10610 4b0b1ed5cfda6ea5bc44c5d0bb23f54b 159 SUPERFAMILY SSF52172 32 86 1.1E-10 T 14-10-2018 IPR011006 CheY-like superfamily C4901_05835 5d8fa579a867ce628d3331d5f48cb9d1 250 Pfam PF08241 Methyltransferase domain 76 131 3.0E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C4901_05835 5d8fa579a867ce628d3331d5f48cb9d1 250 Gene3D G3DSA:3.40.50.150 19 190 7.2E-14 T 14-10-2018 C4901_05835 5d8fa579a867ce628d3331d5f48cb9d1 250 SUPERFAMILY SSF53335 67 221 8.7E-16 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_01915 7b1e585bf05a170c5620b693a93d5514 187 Pfam PF03602 Conserved hypothetical protein 95 9 178 1.2E-49 T 14-10-2018 C4901_01915 7b1e585bf05a170c5620b693a93d5514 187 Gene3D G3DSA:3.40.50.150 3 185 2.0E-52 T 14-10-2018 C4901_01915 7b1e585bf05a170c5620b693a93d5514 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 121 127 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C4901_01915 7b1e585bf05a170c5620b693a93d5514 187 SUPERFAMILY SSF53335 9 178 3.29E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_01915 7b1e585bf05a170c5620b693a93d5514 187 PIRSF PIRSF004553 8 185 1.2E-46 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 C4901_01915 7b1e585bf05a170c5620b693a93d5514 187 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 9 182 1.2E-46 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 Gene3D G3DSA:1.10.8.60 310 383 4.6E-22 T 14-10-2018 C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 SUPERFAMILY SSF52540 138 378 1.81E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 SMART SM00382 158 301 2.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 350 359 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 Gene3D G3DSA:3.30.450.20 10 122 4.4E-9 T 14-10-2018 C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 Pfam PF08448 PAS fold 25 115 1.4E-8 T 14-10-2018 IPR013656 PAS fold-4 C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 Gene3D G3DSA:3.40.50.300 128 309 9.2E-64 T 14-10-2018 C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 SUPERFAMILY SSF46689 351 437 7.17E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 Pfam PF02954 Bacterial regulatory protein, Fis family 398 435 7.0E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 Pfam PF00158 Sigma-54 interaction domain 138 304 3.0E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 SUPERFAMILY SSF55785 11 117 9.95E-12 T 14-10-2018 IPR035965 PAS domain superfamily C4901_14915 e80fb3665f06e65f6662327e27b405c7 444 Gene3D G3DSA:1.10.10.60 389 439 1.5E-7 T 14-10-2018 C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 PIRSF PIRSF002599 1 67 2.6E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 Gene3D G3DSA:2.40.50.140 1 65 2.0E-29 T 14-10-2018 C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 PRINTS PR00050 Cold shock protein signature 25 34 4.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 PRINTS PR00050 Cold shock protein signature 4 19 4.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 PRINTS PR00050 Cold shock protein signature 40 58 4.0E-17 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 SUPERFAMILY SSF50249 1 66 1.2E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 SMART SM00357 3 67 1.7E-27 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C4901_08110 9d69524a774e926dd52fb3f4ebb0a125 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.2E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 87 405 2.9E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 SUPERFAMILY SSF51905 88 441 3.27E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 TIGRFAM TIGR02053 MerA: mercury(II) reductase 87 548 1.9E-165 T 14-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 Gene3D G3DSA:3.30.390.30 423 548 2.5E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 Gene3D G3DSA:3.50.50.60 89 406 5.1E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PRINTS PR00945 Mercuric reductase class II signature 224 241 3.6E-67 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PRINTS PR00945 Mercuric reductase class II signature 279 294 3.6E-67 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PRINTS PR00945 Mercuric reductase class II signature 17 27 3.6E-67 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PRINTS PR00945 Mercuric reductase class II signature 259 276 3.6E-67 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PRINTS PR00945 Mercuric reductase class II signature 456 476 3.6E-67 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PRINTS PR00945 Mercuric reductase class II signature 521 540 3.6E-67 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PRINTS PR00945 Mercuric reductase class II signature 133 152 3.6E-67 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PRINTS PR00945 Mercuric reductase class II signature 97 115 3.6E-67 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 SUPERFAMILY SSF55424 420 546 5.33E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 PIRSF PIRSF000350 3 548 2.0E-226 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 424 530 3.1E-27 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 Gene3D G3DSA:3.30.70.100 4 69 2.2E-13 T 14-10-2018 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 Gene3D G3DSA:3.50.50.60 232 348 5.1E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 38 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 Pfam PF00403 Heavy-metal-associated domain 9 65 6.5E-7 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 SUPERFAMILY SSF55008 6 71 2.23E-13 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C4901_08915 07ff8c66b0fd08e3b1fe532ff0c7c16b 548 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 121 131 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C4901_11965 f2da1da89fc98d2912843eef3757da72 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.1E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C4901_11965 f2da1da89fc98d2912843eef3757da72 244 Pfam PF00106 short chain dehydrogenase 9 197 2.2E-55 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 SUPERFAMILY SSF51735 3 227 5.51E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_11965 f2da1da89fc98d2912843eef3757da72 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.4E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_11965 f2da1da89fc98d2912843eef3757da72 244 Gene3D G3DSA:3.40.50.720 3 242 1.1E-70 T 14-10-2018 C4901_11965 f2da1da89fc98d2912843eef3757da72 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 191 0.0096 T 14-10-2018 C4901_13800 5dac1b183bc328ebf3ebf1a71100ce57 220 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 1 216 40.251 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 C4901_13800 5dac1b183bc328ebf3ebf1a71100ce57 220 TIGRFAM TIGR02796 tolQ: protein TolQ 2 211 3.9E-87 T 14-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 C4901_13800 5dac1b183bc328ebf3ebf1a71100ce57 220 Pfam PF01618 MotA/TolQ/ExbB proton channel family 72 199 7.7E-41 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 SUPERFAMILY SSF81886 613 881 4.05E-82 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 811 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 SUPERFAMILY SSF52540 411 611 2.07E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Gene3D G3DSA:3.90.1440.10 229 363 6.2E-179 T 14-10-2018 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Gene3D G3DSA:3.10.450.50 824 893 1.4E-9 T 14-10-2018 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 SMART SM00957 6 397 1.4E-302 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Pfam PF07517 SecA DEAD-like domain 7 397 2.0E-133 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 SMART SM00958 228 353 4.8E-79 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 ProSitePatterns PS01312 SecA family signature. 495 510 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Gene3D G3DSA:3.40.50.300 412 613 3.3E-86 T 14-10-2018 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 SUPERFAMILY SSF81767 227 363 2.09E-44 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 PRINTS PR00906 SecA protein signature 334 356 1.8E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 PRINTS PR00906 SecA protein signature 63 87 1.8E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 PRINTS PR00906 SecA protein signature 117 127 1.8E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 PRINTS PR00906 SecA protein signature 170 190 1.8E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 PRINTS PR00906 SecA protein signature 371 388 1.8E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 PRINTS PR00906 SecA protein signature 408 421 1.8E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 PRINTS PR00906 SecA protein signature 101 115 1.8E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Pfam PF01043 SecA preprotein cross-linking domain 232 353 2.4E-39 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Gene3D G3DSA:3.40.50.300 22 410 6.2E-179 T 14-10-2018 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Pfam PF07516 SecA Wing and Scaffold domain 610 822 1.0E-68 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Gene3D G3DSA:1.10.3060.10 614 823 7.9E-77 T 14-10-2018 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Pfam PF02810 SEC-C motif 873 891 1.1E-10 T 14-10-2018 IPR004027 SEC-C motif C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 825 20.365 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 C4901_03450 88117dc91b594a9b1faa3fa8a746d2c6 893 SUPERFAMILY SSF52540 5 410 3.04E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08595 936517bd90be8c3f820da09b90a50592 612 SMART SM00052 360 608 1.2E-37 T 14-10-2018 IPR001633 EAL domain C4901_08595 936517bd90be8c3f820da09b90a50592 612 Pfam PF00990 Diguanylate cyclase, GGDEF domain 192 350 1.5E-43 T 14-10-2018 IPR000160 GGDEF domain C4901_08595 936517bd90be8c3f820da09b90a50592 612 SUPERFAMILY SSF55073 197 353 6.91E-46 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_08595 936517bd90be8c3f820da09b90a50592 612 Gene3D G3DSA:3.20.20.450 362 610 1.8E-64 T 14-10-2018 IPR035919 EAL domain superfamily C4901_08595 936517bd90be8c3f820da09b90a50592 612 SUPERFAMILY SSF141868 366 604 2.09E-55 T 14-10-2018 IPR035919 EAL domain superfamily C4901_08595 936517bd90be8c3f820da09b90a50592 612 Pfam PF00563 EAL domain 366 603 2.2E-51 T 14-10-2018 IPR001633 EAL domain C4901_08595 936517bd90be8c3f820da09b90a50592 612 SUPERFAMILY SSF55781 44 189 7.46E-7 T 14-10-2018 C4901_08595 936517bd90be8c3f820da09b90a50592 612 Gene3D G3DSA:3.30.450.40 11 188 4.3E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_08595 936517bd90be8c3f820da09b90a50592 612 SMART SM00267 181 354 1.2E-56 T 14-10-2018 IPR000160 GGDEF domain C4901_08595 936517bd90be8c3f820da09b90a50592 612 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 352 1.2E-48 T 14-10-2018 IPR000160 GGDEF domain C4901_08595 936517bd90be8c3f820da09b90a50592 612 Gene3D G3DSA:3.30.70.270 189 358 1.2E-52 T 14-10-2018 C4901_14290 1a8f1789bcf5e2fcd88fe4a742be0348 377 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 11 377 2.6E-135 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 C4901_14290 1a8f1789bcf5e2fcd88fe4a742be0348 377 Gene3D G3DSA:3.30.420.40 17 372 2.1E-125 T 14-10-2018 C4901_14290 1a8f1789bcf5e2fcd88fe4a742be0348 377 SUPERFAMILY SSF53067 11 350 1.05E-24 T 14-10-2018 C4901_14290 1a8f1789bcf5e2fcd88fe4a742be0348 377 Gene3D G3DSA:3.30.420.40 153 337 2.1E-125 T 14-10-2018 C4901_14290 1a8f1789bcf5e2fcd88fe4a742be0348 377 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 10 377 40.729 T 14-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 C4901_16985 3778993bcf911f8821d9866641fcebb6 156 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 3 85 9.1E-7 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C4901_16985 3778993bcf911f8821d9866641fcebb6 156 SUPERFAMILY SSF54534 3 139 1.96E-25 T 14-10-2018 C4901_16985 3778993bcf911f8821d9866641fcebb6 156 Gene3D G3DSA:2.40.10.330 70 120 3.8E-41 T 14-10-2018 C4901_16985 3778993bcf911f8821d9866641fcebb6 156 Gene3D G3DSA:3.10.50.40 3 151 3.8E-41 T 14-10-2018 C4901_04170 efe6589a26f2069b41f274fc0179cd43 245 SUPERFAMILY SSF56281 1 221 1.37E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_04170 efe6589a26f2069b41f274fc0179cd43 245 Gene3D G3DSA:3.60.15.10 2 244 1.3E-60 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_04170 efe6589a26f2069b41f274fc0179cd43 245 SMART SM00849 11 183 5.2E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase C4901_03400 5dcc72942935d9065fb3304d98b654c1 358 Gene3D G3DSA:3.40.50.2000 5 346 5.7E-116 T 14-10-2018 C4901_03400 5dcc72942935d9065fb3304d98b654c1 358 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 356 35.366 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03400 5dcc72942935d9065fb3304d98b654c1 358 SUPERFAMILY SSF53756 2 356 7.85E-118 T 14-10-2018 C4901_03400 5dcc72942935d9065fb3304d98b654c1 358 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 347 2.7E-37 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 C4901_03400 5dcc72942935d9065fb3304d98b654c1 358 Gene3D G3DSA:3.40.50.2000 161 340 5.7E-116 T 14-10-2018 C4901_03400 5dcc72942935d9065fb3304d98b654c1 358 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 351 2.7E-103 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03400 5dcc72942935d9065fb3304d98b654c1 358 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 141 7.0E-37 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_10760 b12c413a8de12560fc006ae4507824d9 291 Pfam PF00589 Phage integrase family 103 263 2.0E-43 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_10760 b12c413a8de12560fc006ae4507824d9 291 Gene3D G3DSA:1.10.150.130 2 88 2.4E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_10760 b12c413a8de12560fc006ae4507824d9 291 SUPERFAMILY SSF56349 6 264 5.3E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_10760 b12c413a8de12560fc006ae4507824d9 291 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 4 86 5.3E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C4901_10760 b12c413a8de12560fc006ae4507824d9 291 Gene3D G3DSA:1.10.443.10 94 273 2.0E-53 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_04325 4fda31b575721e8ec3477b2d60d36414 182 SUPERFAMILY SSF50324 4 174 1.96E-61 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C4901_04325 4fda31b575721e8ec3477b2d60d36414 182 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.456 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C4901_04325 4fda31b575721e8ec3477b2d60d36414 182 Gene3D G3DSA:3.90.80.10 1 175 3.1E-65 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C4901_04325 4fda31b575721e8ec3477b2d60d36414 182 Pfam PF00719 Inorganic pyrophosphatase 18 174 3.1E-50 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C4901_04325 4fda31b575721e8ec3477b2d60d36414 182 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 Pfam PF01467 Cytidylyltransferase-like 7 135 1.3E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 Gene3D G3DSA:3.40.50.620 2 160 2.2E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 33.241 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 SUPERFAMILY SSF52374 4 156 5.38E-43 T 14-10-2018 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 63 5.3E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 6.3E-43 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 6.3E-43 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 6.3E-43 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 6.3E-43 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 6.3E-43 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C4901_01910 f87c86e95d7f1faf5add474ac0c1b58b 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 157 4.4E-55 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 C4901_03630 72c47957d2f67f6e3ea36c0c50bfdd31 265 PIRSF PIRSF001430 1 251 5.0E-74 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_03630 72c47957d2f67f6e3ea36c0c50bfdd31 265 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 33.934 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_03630 72c47957d2f67f6e3ea36c0c50bfdd31 265 Gene3D G3DSA:3.30.70.660 106 243 6.6E-47 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 C4901_03630 72c47957d2f67f6e3ea36c0c50bfdd31 265 Gene3D G3DSA:3.30.70.580 1 105 2.3E-36 T 14-10-2018 C4901_03630 72c47957d2f67f6e3ea36c0c50bfdd31 265 SUPERFAMILY SSF55120 2 250 2.73E-85 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_03630 72c47957d2f67f6e3ea36c0c50bfdd31 265 Pfam PF01416 tRNA pseudouridine synthase 143 245 4.6E-31 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_03630 72c47957d2f67f6e3ea36c0c50bfdd31 265 Pfam PF01416 tRNA pseudouridine synthase 9 103 5.7E-9 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_03630 72c47957d2f67f6e3ea36c0c50bfdd31 265 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 239 3.6E-64 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 SUPERFAMILY SSF82866 289 491 3.92E-39 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 SUPERFAMILY SSF82693 136 321 5.75E-21 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Gene3D G3DSA:1.20.1640.10 503 1005 4.9E-249 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Gene3D G3DSA:1.20.1640.10 15 502 4.9E-249 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Gene3D G3DSA:3.30.70.1320 131 322 4.9E-249 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 439 462 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 539 556 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 355 376 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 608 622 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 464 487 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 328 351 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 383 407 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.4E-37 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 SUPERFAMILY SSF82714 182 261 2.35E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 SUPERFAMILY SSF82714 707 788 4.32E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Gene3D G3DSA:3.30.70.1430 556 655 4.9E-249 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 SUPERFAMILY SSF82693 553 646 2.41E-8 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 SUPERFAMILY SSF82693 40 125 9.42E-14 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Gene3D G3DSA:3.30.70.1440 656 853 4.9E-249 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Gene3D G3DSA:3.30.70.1430 40 802 4.9E-249 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Gene3D G3DSA:3.30.2090.10 178 269 4.9E-249 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 SUPERFAMILY SSF82866 791 1011 5.75E-36 T 14-10-2018 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Pfam PF00873 AcrB/AcrD/AcrF family 7 1004 3.2E-214 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_08285 f9c282bbf6cd57d5e1e2978b8da7166b 1016 Gene3D G3DSA:3.30.2090.10 706 794 4.9E-249 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_04845 4260d1ef34869f5b19170ed7c6f691d9 280 SUPERFAMILY SSF53850 23 249 2.8E-12 T 14-10-2018 C4901_04845 4260d1ef34869f5b19170ed7c6f691d9 280 Gene3D G3DSA:3.40.190.10 30 243 1.6E-25 T 14-10-2018 C4901_04845 4260d1ef34869f5b19170ed7c6f691d9 280 Gene3D G3DSA:3.40.190.10 107 212 1.6E-25 T 14-10-2018 C4901_04845 4260d1ef34869f5b19170ed7c6f691d9 280 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 30 264 3.3E-38 T 14-10-2018 C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 Pfam PF00437 Type II/IV secretion system protein 186 453 4.1E-91 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 4 561 3.2E-255 T 14-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 SUPERFAMILY SSF52540 169 560 7.84E-99 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 Gene3D G3DSA:3.30.300.160 58 137 2.7E-7 T 14-10-2018 C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 SUPERFAMILY SSF160246 2 136 5.23E-33 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 SMART SM00382 314 466 0.0061 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 37 139 8.3E-18 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 Gene3D G3DSA:3.30.450.90 151 286 6.8E-49 T 14-10-2018 C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 381 395 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_03595 51136ac0c1332f07ccd1466994ceefec 562 Gene3D G3DSA:3.40.50.300 291 562 2.2E-108 T 14-10-2018 C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 SUPERFAMILY SSF55816 387 565 9.29E-30 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 Gene3D G3DSA:3.60.21.10 112 389 1.8E-75 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 SUPERFAMILY SSF56300 50 388 6.69E-72 T 14-10-2018 C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 PRINTS PR01607 Apyrase family signature 50 68 1.8E-6 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 PRINTS PR01607 Apyrase family signature 276 293 1.8E-6 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 PRINTS PR01607 Apyrase family signature 295 318 1.8E-6 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 Pfam PF02872 5'-nucleotidase, C-terminal domain 407 531 1.2E-13 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 TIGRFAM TIGR04486 thiosulf_SoxB: thiosulfohydrolase SoxB 4 573 2.2E-247 T 14-10-2018 IPR030998 Thiosulfohydrolase SoxB C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 22 1.6E-4 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal C4901_13035 1ad7d6e9551edb8faed138b9f062627d 593 Gene3D G3DSA:3.90.780.10 390 577 3.5E-66 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_06865 b49204544cb02aed6391bed1440ef79f 90 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 40 1.6E-8 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 C4901_06865 b49204544cb02aed6391bed1440ef79f 90 SUPERFAMILY SSF47598 2 42 5.11E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_06865 b49204544cb02aed6391bed1440ef79f 90 Gene3D G3DSA:1.10.1220.10 8 49 5.1E-8 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 C4901_14010 7ffebb5e2958813596110ea0b58d2f4c 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 129 1.8E-54 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14010 7ffebb5e2958813596110ea0b58d2f4c 132 PIRSF PIRSF002131 1 132 4.2E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C4901_14010 7ffebb5e2958813596110ea0b58d2f4c 132 Pfam PF00411 Ribosomal protein S11 22 131 9.7E-49 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C4901_14010 7ffebb5e2958813596110ea0b58d2f4c 132 Gene3D G3DSA:3.30.420.80 5 132 1.0E-53 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14010 7ffebb5e2958813596110ea0b58d2f4c 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 10 132 32.367 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 C4901_14010 7ffebb5e2958813596110ea0b58d2f4c 132 SUPERFAMILY SSF53137 17 132 1.5E-45 T 14-10-2018 C4901_14010 7ffebb5e2958813596110ea0b58d2f4c 132 ProSitePatterns PS00054 Ribosomal protein S11 signature. 100 122 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site C4901_03905 3dd6967105b73267cffd352f5fcdb02f 189 Gene3D G3DSA:3.40.50.620 1 187 3.6E-32 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_03905 3dd6967105b73267cffd352f5fcdb02f 189 Pfam PF06508 Queuosine biosynthesis protein QueC 2 62 1.5E-5 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C4901_03905 3dd6967105b73267cffd352f5fcdb02f 189 Pfam PF06508 Queuosine biosynthesis protein QueC 77 185 3.3E-15 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C4901_03905 3dd6967105b73267cffd352f5fcdb02f 189 SUPERFAMILY SSF52402 3 185 4.66E-28 T 14-10-2018 C4901_01745 76bf9ee2d0cb291d0d2ca403cdc2bb57 155 SUPERFAMILY SSF54523 10 106 2.43E-7 T 14-10-2018 C4901_01745 76bf9ee2d0cb291d0d2ca403cdc2bb57 155 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_01745 76bf9ee2d0cb291d0d2ca403cdc2bb57 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 28 2.8E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_01745 76bf9ee2d0cb291d0d2ca403cdc2bb57 155 Gene3D G3DSA:3.30.700.10 10 107 5.9E-5 T 14-10-2018 C4901_01745 76bf9ee2d0cb291d0d2ca403cdc2bb57 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 4.3E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_02240 1bdd9e8292eb47fd21e1fcc1ab0afb32 311 Gene3D G3DSA:3.90.550.10 2 224 1.1E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_02240 1bdd9e8292eb47fd21e1fcc1ab0afb32 311 Pfam PF00535 Glycosyl transferase family 2 8 123 4.0E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_02240 1bdd9e8292eb47fd21e1fcc1ab0afb32 311 SUPERFAMILY SSF53448 7 211 1.88E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_14630 b31f632d9512e8a33699d96c3a406538 381 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 21 371 1.1E-139 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C4901_14630 b31f632d9512e8a33699d96c3a406538 381 Gene3D G3DSA:1.10.1740.110 186 291 5.8E-139 T 14-10-2018 C4901_14630 b31f632d9512e8a33699d96c3a406538 381 PIRSF PIRSF000443 2 377 9.7E-138 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C4901_14630 b31f632d9512e8a33699d96c3a406538 381 Gene3D G3DSA:3.40.50.1820 25 361 5.8E-139 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_14630 b31f632d9512e8a33699d96c3a406538 381 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 13 373 29.674 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 C4901_14630 b31f632d9512e8a33699d96c3a406538 381 SUPERFAMILY SSF53474 13 374 1.65E-103 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_14630 b31f632d9512e8a33699d96c3a406538 381 Pfam PF00561 alpha/beta hydrolase fold 50 358 1.3E-34 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_15470 8ec96ea88b36806691f64d3af3fa941d 230 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 13 33 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_15470 8ec96ea88b36806691f64d3af3fa941d 230 Gene3D G3DSA:3.30.700.10 15 146 3.4E-19 T 14-10-2018 C4901_15470 8ec96ea88b36806691f64d3af3fa941d 230 SUPERFAMILY SSF54523 15 112 4.87E-17 T 14-10-2018 C4901_15470 8ec96ea88b36806691f64d3af3fa941d 230 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 34 3.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_15470 8ec96ea88b36806691f64d3af3fa941d 230 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 35 8.4E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 Gene3D G3DSA:2.40.10.120 20 251 4.8E-73 T 14-10-2018 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 Gene3D G3DSA:2.30.42.10 370 458 2.8E-14 T 14-10-2018 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 Gene3D G3DSA:2.30.42.10 253 355 6.5E-23 T 14-10-2018 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 21 456 9.9E-130 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 Pfam PF13365 Trypsin-like peptidase domain 86 219 1.7E-31 T 14-10-2018 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 PRINTS PR00834 HtrA/DegQ protease family signature 95 107 3.9E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 PRINTS PR00834 HtrA/DegQ protease family signature 190 207 3.9E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 PRINTS PR00834 HtrA/DegQ protease family signature 156 180 3.9E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 PRINTS PR00834 HtrA/DegQ protease family signature 212 229 3.9E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 PRINTS PR00834 HtrA/DegQ protease family signature 298 310 3.9E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 PRINTS PR00834 HtrA/DegQ protease family signature 116 136 3.9E-43 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 370 446 2.7E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 SUPERFAMILY SSF50156 216 341 9.33E-24 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 SUPERFAMILY SSF50494 20 255 1.46E-58 T 14-10-2018 IPR009003 Peptidase S1, PA clan C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 SMART SM00228 371 450 6.0E-9 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 SMART SM00228 258 340 2.4E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 SUPERFAMILY SSF50156 391 457 1.97E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_07080 c1d2fd57cddfe2457cbb6efb64d5a07f 459 Pfam PF13180 PDZ domain 258 348 1.2E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 SUPERFAMILY SSF48108 396 559 4.45E-50 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 429 553 4.0E-39 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 844 851 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Pfam PF02142 MGS-like domain 962 1045 1.1E-17 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 SUPERFAMILY SSF52440 1 127 3.17E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1058 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 SMART SM00851 961 1047 3.2E-31 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 SUPERFAMILY SSF56059 128 401 1.41E-109 T 14-10-2018 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 SUPERFAMILY SSF52440 563 681 1.38E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 2.8E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 2.8E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 2.8E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 2.8E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 2.8E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 2.8E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 2.8E-65 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 715 729 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 SUPERFAMILY SSF52335 942 1076 9.94E-39 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 7.0E-72 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 679 880 9.1E-34 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Gene3D G3DSA:3.40.50.20 560 668 1.7E-47 T 14-10-2018 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Gene3D G3DSA:3.40.50.1380 942 1078 6.0E-38 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 SUPERFAMILY SSF56059 679 939 1.15E-101 T 14-10-2018 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1068 13.039 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1080 13.35 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Gene3D G3DSA:3.30.470.20 671 941 5.4E-115 T 14-10-2018 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Gene3D G3DSA:3.40.50.20 1 116 1.2E-48 T 14-10-2018 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Gene3D G3DSA:3.30.470.20 120 403 3.5E-129 T 14-10-2018 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 SMART SM01096 426 553 2.1E-69 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04505 e88ee11523379139c18c2120e216b2e5 1080 Gene3D G3DSA:1.10.1030.10 404 559 1.5E-46 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_02980 fc97a4cefe85a59e73fcdadd57d88973 315 Pfam PF07475 HPr Serine kinase C-terminal domain 137 307 8.2E-60 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 C4901_02980 fc97a4cefe85a59e73fcdadd57d88973 315 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 4 315 33.597 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 C4901_02980 fc97a4cefe85a59e73fcdadd57d88973 315 SUPERFAMILY SSF53795 139 307 2.32E-34 T 14-10-2018 C4901_02980 fc97a4cefe85a59e73fcdadd57d88973 315 Pfam PF02603 HPr Serine kinase N terminus 11 134 3.2E-22 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 C4901_02980 fc97a4cefe85a59e73fcdadd57d88973 315 SUPERFAMILY SSF75138 11 138 1.11E-23 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily C4901_02980 fc97a4cefe85a59e73fcdadd57d88973 315 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 12 309 3.5E-96 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 C4901_02980 fc97a4cefe85a59e73fcdadd57d88973 315 Gene3D G3DSA:3.40.1390.20 12 136 7.3E-27 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily C4901_02980 fc97a4cefe85a59e73fcdadd57d88973 315 Gene3D G3DSA:3.40.50.300 137 315 2.1E-63 T 14-10-2018 C4901_12150 cfa7e313180e7a5cf9ed065261a16b83 343 Pfam PF00665 Integrase core domain 103 219 6.7E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_12150 cfa7e313180e7a5cf9ed065261a16b83 343 Gene3D G3DSA:3.30.420.10 122 286 2.5E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_12150 cfa7e313180e7a5cf9ed065261a16b83 343 SUPERFAMILY SSF53098 104 264 5.56E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_04595 3ab0c28777cba871ecad032f65a0597c 162 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 10 159 27.853 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04595 3ab0c28777cba871ecad032f65a0597c 162 Gene3D G3DSA:3.30.70.3270 36 162 2.1E-38 T 14-10-2018 C4901_04595 3ab0c28777cba871ecad032f65a0597c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_04595 3ab0c28777cba871ecad032f65a0597c 162 SUPERFAMILY SSF54862 36 145 1.3E-24 T 14-10-2018 C4901_04595 3ab0c28777cba871ecad032f65a0597c 162 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 19 139 1.5E-46 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04595 3ab0c28777cba871ecad032f65a0597c 162 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 102 113 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_04595 3ab0c28777cba871ecad032f65a0597c 162 Pfam PF12838 4Fe-4S dicluster domain 62 115 4.4E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 Gene3D G3DSA:3.40.50.10490 12 204 3.6E-64 T 14-10-2018 C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 Pfam PF01380 SIS domain 50 181 5.6E-30 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 SUPERFAMILY SSF53697 21 331 2.02E-72 T 14-10-2018 C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 Pfam PF00571 CBS domain 278 330 4.8E-9 T 14-10-2018 IPR000644 CBS domain C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 Pfam PF00571 CBS domain 211 266 2.6E-6 T 14-10-2018 IPR000644 CBS domain C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 SMART SM00116 219 267 0.38 T 14-10-2018 IPR000644 CBS domain C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 SMART SM00116 284 332 0.0044 T 14-10-2018 IPR000644 CBS domain C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 PIRSF PIRSF004692 5 333 7.0E-129 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 Gene3D G3DSA:3.10.580.10 205 330 8.8E-43 T 14-10-2018 C4901_03015 6bd31f67c26fef93df4ced0b88050f8a 333 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 54 323 7.9E-108 T 14-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 C4901_02380 e4747bb8ee03836137a046626db2b0ea 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C4901_02380 e4747bb8ee03836137a046626db2b0ea 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 8 282 36.66 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 C4901_02380 e4747bb8ee03836137a046626db2b0ea 284 Gene3D G3DSA:3.40.50.150 93 281 1.5E-51 T 14-10-2018 C4901_02380 e4747bb8ee03836137a046626db2b0ea 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 32 282 2.1E-57 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 C4901_02380 e4747bb8ee03836137a046626db2b0ea 284 Gene3D G3DSA:1.10.8.10 21 92 1.2E-13 T 14-10-2018 C4901_02380 e4747bb8ee03836137a046626db2b0ea 284 SUPERFAMILY SSF53335 31 270 9.21E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_02380 e4747bb8ee03836137a046626db2b0ea 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 34 278 1.9E-74 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 C4901_02380 e4747bb8ee03836137a046626db2b0ea 284 Pfam PF05175 Methyltransferase small domain 111 196 1.3E-14 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 C4901_06040 a7d31a7f870aaa5f570c4789dfeef3e3 660 Gene3D G3DSA:2.60.40.10 8 190 8.3E-39 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_06040 a7d31a7f870aaa5f570c4789dfeef3e3 660 Gene3D G3DSA:1.20.58.280 95 171 8.3E-39 T 14-10-2018 C4901_06040 a7d31a7f870aaa5f570c4789dfeef3e3 660 Pfam PF11896 Domain of unknown function (DUF3416) 8 190 3.7E-39 T 14-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 C4901_06040 a7d31a7f870aaa5f570c4789dfeef3e3 660 Gene3D G3DSA:2.60.40.1180 556 654 3.3E-27 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta C4901_06040 a7d31a7f870aaa5f570c4789dfeef3e3 660 Gene3D G3DSA:3.20.20.80 192 555 2.6E-144 T 14-10-2018 C4901_06040 a7d31a7f870aaa5f570c4789dfeef3e3 660 SUPERFAMILY SSF51445 182 551 1.45E-74 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_06040 a7d31a7f870aaa5f570c4789dfeef3e3 660 SUPERFAMILY SSF51011 559 638 8.84E-5 T 14-10-2018 C4901_06040 a7d31a7f870aaa5f570c4789dfeef3e3 660 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 5 648 42.699 T 14-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 SMART SM00841 131 186 1.1E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 2.0E-26 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 Pfam PF09285 Elongation factor P, C-terminal 131 186 2.1E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 SUPERFAMILY SSF50104 2 63 3.91E-21 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 TIGRFAM TIGR00038 efp: translation elongation factor P 4 187 4.3E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 Gene3D G3DSA:2.40.50.140 130 189 1.6E-26 T 14-10-2018 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 Hamap MF_00141 Elongation factor P [efp]. 3 187 47.935 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 Gene3D G3DSA:2.40.50.140 66 127 2.5E-28 T 14-10-2018 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 SMART SM01185 69 123 7.8E-25 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.8E-21 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 SUPERFAMILY SSF50249 130 187 1.49E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 PIRSF PIRSF005901 2 188 1.5E-64 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 Gene3D G3DSA:2.30.30.30 1 64 1.5E-27 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C4901_04185 6d2f5af9f851239f72898ad9171fb3fe 189 SUPERFAMILY SSF50249 70 128 1.71E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 698 113.129 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 SUPERFAMILY SSF50447 271 411 6.41E-35 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Gene3D G3DSA:2.40.30.10 299 412 1.6E-43 T 14-10-2018 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 698 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Gene3D G3DSA:3.30.230.10 491 694 2.0E-92 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 SUPERFAMILY SSF54211 486 606 1.34E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Pfam PF03764 Elongation factor G, domain IV 486 604 6.7E-49 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 SUPERFAMILY SSF54980 610 697 8.27E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 SMART SM00889 487 605 1.7E-74 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 SMART SM00838 607 694 9.4E-54 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Pfam PF14492 Elongation Factor G, domain II 411 485 9.2E-35 T 14-10-2018 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Gene3D G3DSA:3.30.70.240 611 681 2.0E-92 T 14-10-2018 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 SUPERFAMILY SSF54980 411 488 2.01E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 5.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 5.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 5.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.1E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 5.5E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Pfam PF00679 Elongation factor G C-terminus 608 693 1.9E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Gene3D G3DSA:3.30.70.870 413 490 1.3E-33 T 14-10-2018 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Gene3D G3DSA:3.40.50.300 1 298 2.2E-114 T 14-10-2018 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 2.0E-65 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 SUPERFAMILY SSF52540 6 288 7.66E-105 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14140 1da7788ed6ad11a0f6a6f0d3c7e307d5 699 Pfam PF03144 Elongation factor Tu domain 2 331 398 1.2E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 449 7.6E-180 T 14-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 168 193 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 443 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 254 268 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 401 416 9.8E-74 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 Gene3D G3DSA:3.50.50.60 5 321 4.2E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_09935 138aabf81070ab4589f1e48befdac10c 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 317 1.9E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 SUPERFAMILY SSF51905 1 361 2.95E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_09935 138aabf81070ab4589f1e48befdac10c 449 Gene3D G3DSA:3.50.50.60 143 260 4.2E-112 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PIRSF PIRSF000350 1 448 8.1E-87 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 SUPERFAMILY SSF55424 335 449 2.23E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 186 1.8E-33 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 1.8E-33 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 131 149 1.8E-33 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 1.8E-33 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 269 1.8E-33 T 14-10-2018 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 448 1.9E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C4901_09935 138aabf81070ab4589f1e48befdac10c 449 Gene3D G3DSA:3.30.390.30 337 449 4.1E-45 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_13045 aeabfafaabb117f6a94292579568ab75 591 SUPERFAMILY SSF53098 256 487 4.7E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_13045 aeabfafaabb117f6a94292579568ab75 591 Pfam PF01609 Transposase DDE domain 194 480 4.7E-14 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_00695 0128ce83122f5c1bd414d7ff79502c0f 337 Pfam PF12833 Helix-turn-helix domain 236 314 9.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C4901_00695 0128ce83122f5c1bd414d7ff79502c0f 337 SUPERFAMILY SSF46689 215 264 5.97E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_00695 0128ce83122f5c1bd414d7ff79502c0f 337 Pfam PF01965 DJ-1/PfpI family 38 173 1.3E-12 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 C4901_00695 0128ce83122f5c1bd414d7ff79502c0f 337 SMART SM00342 230 313 3.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C4901_00695 0128ce83122f5c1bd414d7ff79502c0f 337 Gene3D G3DSA:1.10.10.60 213 321 1.0E-24 T 14-10-2018 C4901_00695 0128ce83122f5c1bd414d7ff79502c0f 337 Gene3D G3DSA:3.40.50.880 5 206 1.9E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_00695 0128ce83122f5c1bd414d7ff79502c0f 337 SUPERFAMILY SSF52317 6 194 3.6E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_00695 0128ce83122f5c1bd414d7ff79502c0f 337 SUPERFAMILY SSF46689 267 317 4.93E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_03915 bc7644b5692bc22bee44084dee57b7f8 300 Gene3D G3DSA:2.40.30.170 143 221 8.8E-33 T 14-10-2018 C4901_03915 bc7644b5692bc22bee44084dee57b7f8 300 Gene3D G3DSA:2.40.30.170 54 67 4.5E-8 T 14-10-2018 C4901_03915 bc7644b5692bc22bee44084dee57b7f8 300 SUPERFAMILY SSF111369 68 220 2.22E-6 T 14-10-2018 C4901_03915 bc7644b5692bc22bee44084dee57b7f8 300 Gene3D G3DSA:2.40.50.100 111 142 8.8E-33 T 14-10-2018 C4901_03915 bc7644b5692bc22bee44084dee57b7f8 300 Gene3D G3DSA:2.40.50.100 68 101 4.5E-8 T 14-10-2018 C4901_03915 bc7644b5692bc22bee44084dee57b7f8 300 Gene3D G3DSA:2.40.420.20 222 279 8.8E-33 T 14-10-2018 C4901_03915 bc7644b5692bc22bee44084dee57b7f8 300 Gene3D G3DSA:2.40.420.20 43 53 4.5E-8 T 14-10-2018 C4901_03915 bc7644b5692bc22bee44084dee57b7f8 300 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 106 215 1.4E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 573 590 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 SUPERFAMILY SSF89000 298 449 3.92E-49 T 14-10-2018 C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 Pfam PF00364 Biotin-requiring enzyme 550 616 2.3E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 Gene3D G3DSA:3.20.20.70 1 455 2.2E-170 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 Pfam PF00682 HMGL-like 5 271 2.0E-45 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 8 613 5.6E-244 T 14-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 SUPERFAMILY SSF51569 3 302 1.41E-88 T 14-10-2018 C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 Pfam PF02436 Conserved carboxylase domain 293 482 3.5E-55 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 SUPERFAMILY SSF51230 548 616 1.96E-21 T 14-10-2018 IPR011053 Single hybrid motif C4901_08795 e6e4821c4fe520a368b918f625f726e7 617 Gene3D G3DSA:2.40.50.100 544 617 3.7E-23 T 14-10-2018 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 11 377 6.7E-91 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 Gene3D G3DSA:3.10.150.10 11 252 3.7E-107 T 14-10-2018 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 SUPERFAMILY SSF55979 9 127 6.28E-26 T 14-10-2018 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 Pfam PF02767 DNA polymerase III beta subunit, central domain 139 253 3.7E-32 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 SUPERFAMILY SSF55979 256 377 8.24E-26 T 14-10-2018 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 SMART SM00480 27 373 1.4E-101 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 Gene3D G3DSA:3.70.10.10 147 375 3.7E-107 T 14-10-2018 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 256 376 1.9E-20 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 SUPERFAMILY SSF55979 135 254 4.71E-28 T 14-10-2018 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 PIRSF PIRSF000804 11 377 7.2E-107 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 C4901_00015 5e466e808f49379bfbd5f23da612eea7 377 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 11 128 8.6E-31 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 C4901_16970 2ef0e3a7f4300843197c80a1360fa1b6 329 SUPERFAMILY SSF52540 1 200 3.43E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16970 2ef0e3a7f4300843197c80a1360fa1b6 329 Gene3D G3DSA:3.40.50.300 3 287 9.0E-57 T 14-10-2018 C4901_16970 2ef0e3a7f4300843197c80a1360fa1b6 329 Pfam PF13614 AAA domain 2 189 1.8E-27 T 14-10-2018 IPR025669 AAA domain C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 357 2.9E-160 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 229 245 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 SMART SM00937 66 180 2.9E-58 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 Gene3D G3DSA:3.30.70.1660 114 343 1.7E-95 T 14-10-2018 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 Pfam PF00472 RF-1 domain 214 322 7.8E-42 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 Gene3D G3DSA:1.20.58.410 3 100 1.5E-5 T 14-10-2018 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 358 40.358 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 SUPERFAMILY SSF75620 12 354 4.71E-129 T 14-10-2018 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 Pfam PF03462 PCRF domain 13 205 2.8E-68 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 C4901_02385 e1c2b0239a17c1905109cbbebb319749 360 Gene3D G3DSA:3.30.160.20 212 298 1.7E-95 T 14-10-2018 C4901_02270 30cd3d531b5dbedc273d865ba5713678 189 Pfam PF03843 Outer membrane lipoprotein Slp family 42 178 7.7E-35 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 C4901_02270 30cd3d531b5dbedc273d865ba5713678 189 PIRSF PIRSF004982 28 182 2.0E-37 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 C4901_02155 9ea55d4a00d65d84041793b27a699984 426 Gene3D G3DSA:1.25.40.10 253 421 5.1E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_02155 9ea55d4a00d65d84041793b27a699984 426 SUPERFAMILY SSF48452 269 408 6.64E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_02155 9ea55d4a00d65d84041793b27a699984 426 Pfam PF07219 HemY protein N-terminus 45 151 1.2E-26 T 14-10-2018 IPR010817 HemY, N-terminal C4901_02155 9ea55d4a00d65d84041793b27a699984 426 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 23 402 2.3E-87 T 14-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 Hamap MF_00505 Chaperone protein HtpG [htpG]. 4 618 32.454 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 PRINTS PR00775 90kDa heat shock protein signature 95 112 1.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 PRINTS PR00775 90kDa heat shock protein signature 122 144 1.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 PRINTS PR00775 90kDa heat shock protein signature 7 27 1.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 PRINTS PR00775 90kDa heat shock protein signature 77 94 1.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 PRINTS PR00775 90kDa heat shock protein signature 174 191 1.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 PRINTS PR00775 90kDa heat shock protein signature 192 210 1.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 PRINTS PR00775 90kDa heat shock protein signature 28 50 1.0E-61 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 Gene3D G3DSA:3.30.230.80 224 391 2.2E-68 T 14-10-2018 C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 27 36 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 PIRSF PIRSF002583 1 623 2.6E-207 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 Gene3D G3DSA:1.20.120.790 488 618 5.6E-42 T 14-10-2018 IPR037196 HSP90, C-terminal domain C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 171 5.2E-13 T 14-10-2018 C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 SMART SM00387 29 186 6.7E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 Gene3D G3DSA:3.30.565.10 1 223 1.7E-76 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 Gene3D G3DSA:3.40.50.11260 392 479 5.3E-33 T 14-10-2018 C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 SUPERFAMILY SSF55874 7 213 3.01E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 SUPERFAMILY SSF110942 506 618 8.76E-37 T 14-10-2018 IPR037196 HSP90, C-terminal domain C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 SUPERFAMILY SSF54211 225 478 3.26E-96 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_05760 2ab2f67b6449295a84067188067e5b7e 623 Pfam PF00183 Hsp90 protein 220 617 2.9E-126 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 C4901_00945 8dab45e834e6831433e28ea670049927 256 SMART SM00345 20 79 3.8E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_00945 8dab45e834e6831433e28ea670049927 256 SUPERFAMILY SSF64288 67 247 8.79E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C4901_00945 8dab45e834e6831433e28ea670049927 256 Gene3D G3DSA:3.40.1410.10 84 248 1.4E-41 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily C4901_00945 8dab45e834e6831433e28ea670049927 256 Pfam PF07702 UTRA domain 101 238 7.1E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 C4901_00945 8dab45e834e6831433e28ea670049927 256 Gene3D G3DSA:1.10.10.10 14 83 3.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_00945 8dab45e834e6831433e28ea670049927 256 SMART SM00866 100 240 7.2E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 C4901_00945 8dab45e834e6831433e28ea670049927 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 5.2E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_00945 8dab45e834e6831433e28ea670049927 256 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 5.2E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_00945 8dab45e834e6831433e28ea670049927 256 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 9.6E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_00945 8dab45e834e6831433e28ea670049927 256 SUPERFAMILY SSF46785 13 89 8.54E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_01575 f1bbdb1accc509ee64d70cfb3ba94ddb 502 Pfam PF13520 Amino acid permease 73 467 1.4E-22 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C4901_01575 f1bbdb1accc509ee64d70cfb3ba94ddb 502 Gene3D G3DSA:1.20.1740.10 55 492 1.9E-38 T 14-10-2018 C4901_01575 f1bbdb1accc509ee64d70cfb3ba94ddb 502 PIRSF PIRSF006060 40 500 6.2E-40 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C4901_05210 e44e04eaacabd1c9977fe93a3976e992 468 SUPERFAMILY SSF53098 177 331 8.34E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_05210 e44e04eaacabd1c9977fe93a3976e992 468 Pfam PF13546 DDE superfamily endonuclease 16 253 2.6E-10 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 SUPERFAMILY SSF46689 376 467 1.05E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 249 264 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 376 385 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 448 468 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 431 448 1.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 Gene3D G3DSA:1.10.8.60 334 410 1.6E-21 T 14-10-2018 C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 Pfam PF00158 Sigma-54 interaction domain 163 329 6.6E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 SMART SM00382 183 327 3.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 Gene3D G3DSA:1.10.10.60 414 469 3.7E-16 T 14-10-2018 C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 SUPERFAMILY SSF52540 162 404 9.46E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 Pfam PF02954 Bacterial regulatory protein, Fis family 425 465 2.5E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_15940 e45d1b05eb8ca61a0b65c59eadf53d15 474 Gene3D G3DSA:3.40.50.300 151 333 3.2E-64 T 14-10-2018 C4901_12565 5a8a287079e81cdee142a82359f08e7d 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 122 17.802 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C4901_12565 5a8a287079e81cdee142a82359f08e7d 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 117 1.5E-20 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 Gene3D G3DSA:1.20.58.100 435 547 9.5E-33 T 14-10-2018 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 Gene3D G3DSA:4.10.80.40 548 588 5.6E-9 T 14-10-2018 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 11 588 2.9E-232 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 SUPERFAMILY SSF51905 6 446 3.04E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 Gene3D G3DSA:3.50.50.60 11 417 1.8E-163 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 Pfam PF00890 FAD binding domain 11 406 9.1E-110 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 462 588 1.3E-37 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 SUPERFAMILY SSF46977 452 588 1.7E-46 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 45 54 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 588 1.6E-261 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 PIRSF PIRSF000171 1 579 7.4E-43 T 14-10-2018 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 SUPERFAMILY SSF56425 238 356 1.79E-41 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10315 e7d5af3735ce5715a3232fbf2abcfbb2 588 Gene3D G3DSA:3.90.700.10 248 351 1.8E-163 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 Pfam PF00175 Oxidoreductase NAD-binding domain 197 300 2.3E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 196 215 7.3E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 135 142 7.3E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 119 131 7.3E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 221 230 7.3E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00410 Phenol hydroxylase reductase family signature 286 294 7.3E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 Pfam PF00970 Oxidoreductase FAD-binding domain 104 186 6.9E-10 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 76 5.6E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 SUPERFAMILY SSF54292 3 87 1.7E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 SUPERFAMILY SSF52343 189 319 3.01E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 119 129 4.9E-10 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 135 142 4.9E-10 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 196 215 4.9E-10 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 221 230 4.9E-10 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 286 294 4.9E-10 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 Gene3D G3DSA:2.40.30.10 94 185 1.1E-22 T 14-10-2018 C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 SUPERFAMILY SSF63380 92 185 4.49E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 Gene3D G3DSA:3.10.20.30 4 93 2.2E-20 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_07795 e1032d2c5c86af76e498a87dd2ad9588 323 Gene3D G3DSA:3.40.50.80 186 322 1.7E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 Gene3D G3DSA:4.10.520.10 1 92 1.1E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 92 28.485 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 SMART SM00411 1 91 2.4E-38 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 1.5E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 1.5E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 1.5E-17 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 91 1.7E-39 T 14-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 SUPERFAMILY SSF47729 1 91 1.27E-28 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C4901_12050 424142f5bfefb6585a585b4a07998ed4 92 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.9E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_02265 d3e43616d6e49d76d641d0c81ea4339d 132 Gene3D G3DSA:3.40.50.1010 1 131 8.3E-39 T 14-10-2018 C4901_02265 d3e43616d6e49d76d641d0c81ea4339d 132 Pfam PF01850 PIN domain 3 124 5.6E-19 T 14-10-2018 IPR002716 PIN domain C4901_02265 d3e43616d6e49d76d641d0c81ea4339d 132 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 129 12.368 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_02265 d3e43616d6e49d76d641d0c81ea4339d 132 SUPERFAMILY SSF88723 2 131 3.08E-36 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 165 244 4.1E-30 T 14-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 Pfam PF00462 Glutaredoxin 174 234 4.6E-15 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 Gene3D G3DSA:3.40.30.10 173 243 2.8E-20 T 14-10-2018 C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 SUPERFAMILY SSF52833 5 243 2.66E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 PRINTS PR00160 Glutaredoxin signature 231 244 5.9E-13 T 14-10-2018 IPR014025 Glutaredoxin subgroup C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 PRINTS PR00160 Glutaredoxin signature 217 230 5.9E-13 T 14-10-2018 IPR014025 Glutaredoxin subgroup C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 PRINTS PR00160 Glutaredoxin signature 174 192 5.9E-13 T 14-10-2018 IPR014025 Glutaredoxin subgroup C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 Pfam PF08534 Redoxin 7 161 6.3E-33 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 ProSitePatterns PS00195 Glutaredoxin active site. 176 192 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 C4901_09930 b210b29586a6ef2a6b6324ee74955928 247 Gene3D G3DSA:3.40.30.10 5 166 1.6E-60 T 14-10-2018 C4901_05185 75c86281ff1852f9267f28ee20774e46 145 SUPERFAMILY SSF46785 12 132 3.27E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_05185 75c86281ff1852f9267f28ee20774e46 145 Gene3D G3DSA:1.10.10.10 6 90 3.3E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_05185 75c86281ff1852f9267f28ee20774e46 145 Pfam PF01475 Ferric uptake regulator family 21 113 7.3E-19 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 9 289 57.369 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 Gene3D G3DSA:3.30.930.10 3 212 9.1E-107 T 14-10-2018 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 115 139 2.8E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 63 78 2.8E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 84 104 2.8E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 249 265 2.8E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 164 179 2.8E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 141 161 2.8E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 11 288 2.3E-143 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 Gene3D G3DSA:1.20.58.180 213 294 4.8E-29 T 14-10-2018 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 SUPERFAMILY SSF55681 10 288 3.37E-126 T 14-10-2018 C4901_01180 e10ff8b9084e27ff91c1c1a6eaf0504c 300 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 10 294 4.6E-145 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_10740 aa44bb99a89afb013377622af93c529f 444 SUPERFAMILY SSF103642 110 130 5.07E-6 T 14-10-2018 C4901_10740 aa44bb99a89afb013377622af93c529f 444 Pfam PF02810 SEC-C motif 113 129 1.9E-7 T 14-10-2018 IPR004027 SEC-C motif C4901_10740 aa44bb99a89afb013377622af93c529f 444 Gene3D G3DSA:3.10.450.50 95 130 4.1E-5 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Gene3D G3DSA:1.20.1640.10 10 504 1.1E-265 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Gene3D G3DSA:3.30.70.1430 559 655 1.1E-265 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 SUPERFAMILY SSF82866 792 1013 2.75E-41 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 SUPERFAMILY SSF82693 138 328 2.93E-18 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 467 490 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 442 465 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 5.3E-69 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 SUPERFAMILY SSF82866 295 493 7.06E-45 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 SUPERFAMILY SSF82714 188 270 2.22E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16505 12ead1780994810d2e0090726510b9dd 1037 SUPERFAMILY SSF82693 41 130 3.53E-23 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 SUPERFAMILY SSF82714 707 791 1.31E-11 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Pfam PF00873 AcrB/AcrD/AcrF family 4 1011 4.5E-245 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 SUPERFAMILY SSF82693 557 658 1.26E-15 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Gene3D G3DSA:3.30.70.1440 656 850 1.1E-265 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Gene3D G3DSA:3.30.70.1320 134 330 1.1E-265 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Gene3D G3DSA:3.30.2090.10 706 793 1.1E-265 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Gene3D G3DSA:1.20.1640.10 505 1008 1.1E-265 T 14-10-2018 C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Gene3D G3DSA:3.30.2090.10 182 273 1.1E-265 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16505 12ead1780994810d2e0090726510b9dd 1037 Gene3D G3DSA:3.30.70.1430 40 801 1.1E-265 T 14-10-2018 C4901_10870 be10666d17b7ef13e71f562f530c848b 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C4901_10870 be10666d17b7ef13e71f562f530c848b 273 Gene3D G3DSA:2.160.10.10 75 193 5.0E-37 T 14-10-2018 C4901_10870 be10666d17b7ef13e71f562f530c848b 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 158 1.4E-7 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10870 be10666d17b7ef13e71f562f530c848b 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 80 116 2.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10870 be10666d17b7ef13e71f562f530c848b 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 17 174 3.5E-73 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 C4901_10870 be10666d17b7ef13e71f562f530c848b 273 SUPERFAMILY SSF51161 12 180 2.36E-53 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_10870 be10666d17b7ef13e71f562f530c848b 273 Gene3D G3DSA:1.10.3130.10 5 74 5.7E-16 T 14-10-2018 C4901_08345 258976542603ff80763fe30ba7271487 157 Pfam PF02629 CoA binding domain 7 99 1.2E-28 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C4901_08345 258976542603ff80763fe30ba7271487 157 SUPERFAMILY SSF51735 1 121 5.33E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_08345 258976542603ff80763fe30ba7271487 157 SMART SM00881 4 100 6.3E-34 T 14-10-2018 IPR003781 CoA-binding GO:0048037 C4901_08345 258976542603ff80763fe30ba7271487 157 Gene3D G3DSA:3.40.50.720 2 122 6.1E-49 T 14-10-2018 C4901_02555 f12f81a1f515eecb523e38fe7fb5b9cb 340 Pfam PF01841 Transglutaminase-like superfamily 177 289 1.3E-17 T 14-10-2018 IPR002931 Transglutaminase-like C4901_02555 f12f81a1f515eecb523e38fe7fb5b9cb 340 SMART SM00460 219 291 1.9E-13 T 14-10-2018 IPR002931 Transglutaminase-like C4901_02555 f12f81a1f515eecb523e38fe7fb5b9cb 340 Gene3D G3DSA:3.10.620.30 143 331 3.3E-23 T 14-10-2018 C4901_02555 f12f81a1f515eecb523e38fe7fb5b9cb 340 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 55 126 1.3E-15 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal C4901_02555 f12f81a1f515eecb523e38fe7fb5b9cb 340 SUPERFAMILY SSF54001 103 330 1.02E-40 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C4901_14365 d7268931dcfe250f2496ad69ec8c3bd1 211 Pfam PF03232 Ubiquinone biosynthesis protein COQ7 51 211 8.5E-40 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 C4901_14365 d7268931dcfe250f2496ad69ec8c3bd1 211 Hamap MF_01658 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase [coq7]. 11 211 26.945 T 14-10-2018 IPR011566 Ubiquinone biosynthesis protein Coq7 GO:0006744|GO:0055114 Reactome: R-HSA-2142789 C4901_14365 d7268931dcfe250f2496ad69ec8c3bd1 211 Gene3D G3DSA:1.20.1260.10 51 197 1.2E-7 T 14-10-2018 IPR012347 Ferritin-like C4901_14365 d7268931dcfe250f2496ad69ec8c3bd1 211 SUPERFAMILY SSF47240 57 180 3.01E-15 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_04655 0213d6e569af679554b716f4bccfa889 153 Pfam PF17384 RimP C-terminal SH3 domain 88 153 3.4E-17 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal C4901_04655 0213d6e569af679554b716f4bccfa889 153 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 10 153 26.406 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 C4901_04655 0213d6e569af679554b716f4bccfa889 153 Pfam PF02576 RimP N-terminal domain 15 85 8.7E-28 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal C4901_04655 0213d6e569af679554b716f4bccfa889 153 Gene3D G3DSA:3.30.300.70 5 82 4.4E-25 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily C4901_04655 0213d6e569af679554b716f4bccfa889 153 SUPERFAMILY SSF75420 8 85 4.32E-25 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily C4901_04655 0213d6e569af679554b716f4bccfa889 153 SUPERFAMILY SSF74942 86 152 4.84E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily C4901_05350 d9ec8f9c20bf6fe55cb505c2257ee24c 427 Pfam PF01566 Natural resistance-associated macrophage protein 36 400 1.2E-75 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 C4901_12530 b3a6284ebcac52e23cc954ede11e80eb 415 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 55 400 1.5E-93 T 14-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 C4901_12530 b3a6284ebcac52e23cc954ede11e80eb 415 Pfam PF03739 Predicted permease YjgP/YjgQ family 61 401 1.9E-57 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 1.6E-121 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 PIRSF PIRSF000726 53 409 7.7E-147 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 PIRSF PIRSF000726 1 62 3.4E-21 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 Gene3D G3DSA:3.30.70.260 260 337 1.2E-58 T 14-10-2018 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 Gene3D G3DSA:3.40.1160.10 1 253 3.5E-90 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 Pfam PF01842 ACT domain 268 323 5.8E-9 T 14-10-2018 IPR002912 ACT domain C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 SUPERFAMILY SSF55021 330 403 1.25E-24 T 14-10-2018 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 Pfam PF00696 Amino acid kinase family 3 229 2.4E-50 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 Gene3D G3DSA:3.30.70.260 254 402 1.2E-58 T 14-10-2018 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 SUPERFAMILY SSF55021 247 325 8.36E-18 T 14-10-2018 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 SUPERFAMILY SSF53633 4 241 8.51E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 Pfam PF13840 ACT domain 336 398 1.8E-16 T 14-10-2018 IPR027795 CASTOR, ACT domain C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C4901_11280 27b7c12ff94211d276d9170452c64ac0 413 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 401 6.1E-134 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Gene3D G3DSA:2.40.30.10 183 282 3.4E-35 T 14-10-2018 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Gene3D G3DSA:3.30.70.870 283 364 1.1E-35 T 14-10-2018 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 172 3.1E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Gene3D G3DSA:3.30.70.2570 476 550 1.7E-33 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Gene3D G3DSA:3.40.50.300 1 182 4.7E-67 T 14-10-2018 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Gene3D G3DSA:3.30.70.3380 365 475 3.3E-38 T 14-10-2018 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 TIGRFAM TIGR01393 lepA: elongation factor 4 1 592 2.9E-294 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Pfam PF06421 GTP-binding protein LepA C-terminus 484 590 3.3E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 PRINTS PR00315 GTP-binding elongation factor signature 71 81 5.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 PRINTS PR00315 GTP-binding elongation factor signature 87 98 5.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 PRINTS PR00315 GTP-binding elongation factor signature 46 54 5.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 PRINTS PR00315 GTP-binding elongation factor signature 3 16 5.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 PRINTS PR00315 GTP-binding elongation factor signature 123 132 5.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 SUPERFAMILY SSF54980 396 490 1.77E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Pfam PF03144 Elongation factor Tu domain 2 202 272 8.8E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Pfam PF00009 Elongation factor Tu GTP binding domain 1 178 5.1E-49 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 SUPERFAMILY SSF52540 1 203 2.53E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 SUPERFAMILY SSF50447 162 285 2.91E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Hamap MF_00071 Elongation factor 4 [lepA]. 1 593 298.024 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 Pfam PF00679 Elongation factor G C-terminus 396 481 1.5E-18 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 SUPERFAMILY SSF54980 289 367 1.22E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like C4901_07085 717cca979f54ecf8d87fb79ef4108383 593 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 39 54 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C4901_06295 1aa6b0bde5525e31a124377903a281df 539 SMART SM00267 345 517 1.3E-47 T 14-10-2018 IPR000160 GGDEF domain C4901_06295 1aa6b0bde5525e31a124377903a281df 539 Gene3D G3DSA:3.30.450.20 49 203 1.9E-10 T 14-10-2018 C4901_06295 1aa6b0bde5525e31a124377903a281df 539 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 352 510 1.0E-41 T 14-10-2018 IPR000160 GGDEF domain C4901_06295 1aa6b0bde5525e31a124377903a281df 539 Gene3D G3DSA:3.30.70.270 351 514 1.2E-51 T 14-10-2018 C4901_06295 1aa6b0bde5525e31a124377903a281df 539 Pfam PF00990 Diguanylate cyclase, GGDEF domain 356 510 1.4E-43 T 14-10-2018 IPR000160 GGDEF domain C4901_06295 1aa6b0bde5525e31a124377903a281df 539 SUPERFAMILY SSF55073 361 509 3.77E-44 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_10920 b0b939b77628730f93453ae56a7cc83b 231 Gene3D G3DSA:3.30.420.40 107 192 1.3E-52 T 14-10-2018 C4901_10920 b0b939b77628730f93453ae56a7cc83b 231 SUPERFAMILY SSF53067 118 221 2.2E-15 T 14-10-2018 C4901_10920 b0b939b77628730f93453ae56a7cc83b 231 SUPERFAMILY SSF53067 16 113 1.23E-21 T 14-10-2018 C4901_10920 b0b939b77628730f93453ae56a7cc83b 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 16 223 1.4E-44 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 C4901_10920 b0b939b77628730f93453ae56a7cc83b 231 Pfam PF00814 Glycoprotease family 48 147 2.0E-22 T 14-10-2018 IPR000905 Gcp-like domain C4901_10920 b0b939b77628730f93453ae56a7cc83b 231 Gene3D G3DSA:3.30.420.40 16 226 1.3E-52 T 14-10-2018 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 26 485 5.6E-165 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 Gene3D G3DSA:3.60.120.10 3 492 2.3E-179 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 SUPERFAMILY SSF56322 15 487 6.41E-158 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 Pfam PF04715 Anthranilate synthase component I, N terminal region 26 168 2.2E-30 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 PRINTS PR00095 Anthranilate synthase component I signature 325 338 8.6E-25 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 PRINTS PR00095 Anthranilate synthase component I signature 434 448 8.6E-25 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 PRINTS PR00095 Anthranilate synthase component I signature 339 352 8.6E-25 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 PRINTS PR00095 Anthranilate synthase component I signature 419 433 8.6E-25 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_14395 3facf7c1843056cf70a7808d60cc7a00 510 Pfam PF00425 chorismate binding enzyme 224 477 5.9E-101 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal C4901_10175 c35ca0015bf3a01f49fa6194246a4bd4 132 Pfam PF16694 Cytochrome P460 16 98 5.0E-7 T 14-10-2018 IPR032033 Cytochrome P460 C4901_15110 a2e351bf4e4f43c4f74326e40a2ca417 342 Pfam PF13358 DDE superfamily endonuclease 168 299 1.9E-30 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain C4901_15110 a2e351bf4e4f43c4f74326e40a2ca417 342 Gene3D G3DSA:3.30.420.470 132 340 1.2E-10 T 14-10-2018 C4901_15110 a2e351bf4e4f43c4f74326e40a2ca417 342 SUPERFAMILY SSF46689 14 128 3.85E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_15110 a2e351bf4e4f43c4f74326e40a2ca417 342 Pfam PF13592 Winged helix-turn helix 95 153 2.4E-18 T 14-10-2018 IPR025959 Winged helix-turn helix domain C4901_15110 a2e351bf4e4f43c4f74326e40a2ca417 342 Pfam PF13518 Helix-turn-helix domain 17 69 1.2E-5 T 14-10-2018 C4901_03815 ca9120df3b1401e80fe29a131dd0bd3c 608 SMART SM00382 367 553 2.9E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03815 ca9120df3b1401e80fe29a131dd0bd3c 608 Pfam PF00005 ABC transporter 358 507 4.5E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_03815 ca9120df3b1401e80fe29a131dd0bd3c 608 Gene3D G3DSA:1.20.1560.10 16 331 9.6E-111 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_03815 ca9120df3b1401e80fe29a131dd0bd3c 608 Pfam PF00664 ABC transporter transmembrane region 25 297 2.2E-30 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C4901_03815 ca9120df3b1401e80fe29a131dd0bd3c 608 Gene3D G3DSA:3.40.50.300 333 590 6.1E-95 T 14-10-2018 C4901_03815 ca9120df3b1401e80fe29a131dd0bd3c 608 SUPERFAMILY SSF90123 11 331 3.14E-58 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_03815 ca9120df3b1401e80fe29a131dd0bd3c 608 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_03815 ca9120df3b1401e80fe29a131dd0bd3c 608 SUPERFAMILY SSF52540 335 577 1.78E-89 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02275 5f66b9cda42300d0f00bc4a154b5f114 198 Pfam PF03843 Outer membrane lipoprotein Slp family 28 174 4.7E-40 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 C4901_02275 5f66b9cda42300d0f00bc4a154b5f114 198 PIRSF PIRSF004982 14 191 4.4E-46 T 14-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 C4901_03185 b2d38050e8e4fb99f224a5781228b0f3 88 Pfam PF02416 mttA/Hcf106 family 5 54 2.0E-13 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 C4901_03185 b2d38050e8e4fb99f224a5781228b0f3 88 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 60 21.186 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 C4901_03185 b2d38050e8e4fb99f224a5781228b0f3 88 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 47 2.6E-21 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 C4901_04805 82fd5a649a4b659b2f469a9eabfe7305 190 Gene3D G3DSA:3.30.70.100 115 187 2.8E-13 T 14-10-2018 C4901_04805 82fd5a649a4b659b2f469a9eabfe7305 190 SUPERFAMILY SSF55008 115 185 7.2E-12 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C4901_04805 82fd5a649a4b659b2f469a9eabfe7305 190 Pfam PF00403 Heavy-metal-associated domain 118 180 4.2E-7 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C4901_02655 a9c6bdb28b433ea4337921859d92be82 348 Gene3D G3DSA:3.40.50.10800 110 333 3.1E-93 T 14-10-2018 C4901_02655 a9c6bdb28b433ea4337921859d92be82 348 Gene3D G3DSA:3.40.50.10800 26 315 3.1E-93 T 14-10-2018 C4901_02655 a9c6bdb28b433ea4337921859d92be82 348 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 26 335 2.7E-107 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C4901_02655 a9c6bdb28b433ea4337921859d92be82 348 Pfam PF02445 Quinolinate synthetase A protein 26 333 1.9E-101 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C4901_02655 a9c6bdb28b433ea4337921859d92be82 348 Gene3D G3DSA:3.40.50.10800 195 290 3.1E-93 T 14-10-2018 C4901_02655 a9c6bdb28b433ea4337921859d92be82 348 SUPERFAMILY SSF142754 25 334 5.23E-106 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 C4901_16350 d04239040749831c5aff0556999eb342 577 SUPERFAMILY SSF47323 452 577 3.07E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_16350 d04239040749831c5aff0556999eb342 577 Gene3D G3DSA:3.40.50.620 118 451 2.6E-157 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_16350 d04239040749831c5aff0556999eb342 577 Gene3D G3DSA:1.10.730.10 452 577 2.6E-157 T 14-10-2018 C4901_16350 d04239040749831c5aff0556999eb342 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 128 137 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_16350 d04239040749831c5aff0556999eb342 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 30 577 1.0E-127 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 Gene3D G3DSA:3.30.1360.70 2 110 3.3E-23 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 577 25.55 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 Pfam PF00750 tRNA synthetases class I (R) 99 175 1.8E-11 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 Pfam PF00750 tRNA synthetases class I (R) 292 424 1.5E-8 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 SUPERFAMILY SSF55190 10 110 2.75E-21 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 SMART SM00836 457 577 1.5E-53 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C4901_16350 d04239040749831c5aff0556999eb342 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 89 6.7E-20 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C4901_16350 d04239040749831c5aff0556999eb342 577 Pfam PF05746 DALR anticodon binding domain 457 577 3.2E-32 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C4901_16350 d04239040749831c5aff0556999eb342 577 SMART SM01016 3 90 3.8E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C4901_16350 d04239040749831c5aff0556999eb342 577 SUPERFAMILY SSF52374 115 468 2.02E-88 T 14-10-2018 C4901_16350 d04239040749831c5aff0556999eb342 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 157 170 7.2E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 118 133 7.2E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 326 347 7.2E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C4901_16350 d04239040749831c5aff0556999eb342 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 133 149 7.2E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 C4901_06010 e1ff9f7981356a753811a8ca2734d665 257 Gene3D G3DSA:3.40.50.12740 24 104 1.6E-8 T 14-10-2018 C4901_06010 e1ff9f7981356a753811a8ca2734d665 257 Gene3D G3DSA:3.40.50.300 153 238 8.1E-17 T 14-10-2018 C4901_06010 e1ff9f7981356a753811a8ca2734d665 257 Pfam PF00158 Sigma-54 interaction domain 164 222 8.4E-15 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_06010 e1ff9f7981356a753811a8ca2734d665 257 SUPERFAMILY SSF52540 160 222 1.7E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_06010 e1ff9f7981356a753811a8ca2734d665 257 Pfam PF00072 Response regulator receiver domain 27 74 1.5E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06010 e1ff9f7981356a753811a8ca2734d665 257 SUPERFAMILY SSF52172 22 203 2.42E-13 T 14-10-2018 IPR011006 CheY-like superfamily C4901_09330 03bdb4729b683468f8092bd3c3b04b22 107 Gene3D G3DSA:1.10.260.40 5 105 1.0E-28 T 14-10-2018 C4901_09330 03bdb4729b683468f8092bd3c3b04b22 107 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 15 94 7.9E-30 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 C4901_09330 03bdb4729b683468f8092bd3c3b04b22 107 SUPERFAMILY SSF47413 19 102 1.41E-22 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_09330 03bdb4729b683468f8092bd3c3b04b22 107 Pfam PF13560 Helix-turn-helix domain 25 73 2.2E-6 T 14-10-2018 C4901_01290 aa5b9a118c614ccb395fbce425c1a874 310 Pfam PF16199 Radical_SAM C-terminal domain 212 293 9.2E-22 T 14-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 C4901_01290 aa5b9a118c614ccb395fbce425c1a874 310 Gene3D G3DSA:3.80.30.20 40 234 1.5E-15 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C4901_01290 aa5b9a118c614ccb395fbce425c1a874 310 SUPERFAMILY SSF102114 15 293 7.32E-44 T 14-10-2018 C4901_01290 aa5b9a118c614ccb395fbce425c1a874 310 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 8 302 1.4E-101 T 14-10-2018 IPR005911 Protein YhcC-like GO:0051536 C4901_01290 aa5b9a118c614ccb395fbce425c1a874 310 SMART SM00729 24 250 5.6E-35 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_01290 aa5b9a118c614ccb395fbce425c1a874 310 Pfam PF04055 Radical SAM superfamily 44 204 2.0E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 3 439 34.384 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 SUPERFAMILY SSF51984 4 93 3.53E-18 T 14-10-2018 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 Gene3D G3DSA:3.40.1190.10 93 301 1.4E-68 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 Gene3D G3DSA:3.90.190.20 307 443 4.4E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 Pfam PF08245 Mur ligase middle domain 109 282 4.2E-31 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 SUPERFAMILY SSF53244 301 439 8.47E-45 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 6 437 1.1E-129 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 SUPERFAMILY SSF53623 95 299 1.83E-56 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 Gene3D G3DSA:3.40.50.720 2 92 4.1E-21 T 14-10-2018 C4901_03390 0ca1f24eae28c724ae36830004b183f1 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 303 375 4.9E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C4901_07480 c720a4d0606f58fb948dc55081be2e9c 101 SMART SM00530 17 72 2.2E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_07480 c720a4d0606f58fb948dc55081be2e9c 101 SUPERFAMILY SSF47413 12 95 2.11E-26 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_07480 c720a4d0606f58fb948dc55081be2e9c 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 86 8.5E-31 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 C4901_07480 c720a4d0606f58fb948dc55081be2e9c 101 Pfam PF01381 Helix-turn-helix 19 70 9.3E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_07480 c720a4d0606f58fb948dc55081be2e9c 101 Gene3D G3DSA:1.10.260.40 2 101 1.3E-33 T 14-10-2018 C4901_06775 d104cb93b6e00ddb99fcd944ee92828f 119 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 3 117 1.6E-43 T 14-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 C4901_06775 d104cb93b6e00ddb99fcd944ee92828f 119 Pfam PF02635 DsrE/DsrF-like family 1 117 3.1E-30 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_06775 d104cb93b6e00ddb99fcd944ee92828f 119 SUPERFAMILY SSF75169 1 117 5.05E-37 T 14-10-2018 IPR027396 DsrEFH-like C4901_06775 d104cb93b6e00ddb99fcd944ee92828f 119 Gene3D G3DSA:3.40.1260.10 1 119 8.7E-46 T 14-10-2018 IPR027396 DsrEFH-like C4901_00930 387ae723435b9e03942ced82e81e9ded 249 SUPERFAMILY SSF50182 147 211 2.29E-10 T 14-10-2018 IPR010920 LSM domain superfamily C4901_00930 387ae723435b9e03942ced82e81e9ded 249 Pfam PF00924 Mechanosensitive ion channel 102 208 8.6E-13 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 C4901_00930 387ae723435b9e03942ced82e81e9ded 249 Gene3D G3DSA:2.30.30.60 162 210 3.6E-5 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily C4901_12760 8dbabf17265a044b9803ba91c68aee39 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 2.0E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C4901_12760 8dbabf17265a044b9803ba91c68aee39 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 2.0E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C4901_12760 8dbabf17265a044b9803ba91c68aee39 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 2.0E-13 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C4901_12760 8dbabf17265a044b9803ba91c68aee39 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 C4901_12760 8dbabf17265a044b9803ba91c68aee39 163 Gene3D G3DSA:2.40.100.10 1 162 5.5E-67 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C4901_12760 8dbabf17265a044b9803ba91c68aee39 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 160 7.5E-46 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 C4901_12760 8dbabf17265a044b9803ba91c68aee39 163 PIRSF PIRSF001467 1 160 6.4E-27 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 C4901_12760 8dbabf17265a044b9803ba91c68aee39 163 SUPERFAMILY SSF50891 1 161 3.94E-58 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 Hamap MF_00235 Adenylate kinase [adk]. 1 213 52.516 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 Pfam PF00406 Adenylate kinase 5 190 1.5E-57 T 14-10-2018 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 Gene3D G3DSA:3.40.50.300 1 217 1.4E-83 T 14-10-2018 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 7.3E-79 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 PRINTS PR00094 Adenylate kinase signature 32 46 5.2E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 PRINTS PR00094 Adenylate kinase signature 81 97 5.2E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 PRINTS PR00094 Adenylate kinase signature 160 175 5.2E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 PRINTS PR00094 Adenylate kinase signature 177 191 5.2E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 PRINTS PR00094 Adenylate kinase signature 4 17 5.2E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 SUPERFAMILY SSF52540 1 215 1.25E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 C4901_01025 dcafc5e50e468027ed5f841f5135fe0f 352 Pfam PF05191 Adenylate kinase, active site lid 127 162 2.3E-16 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 C4901_06205 456054165507142f8069be865e73355b 713 Pfam PF12867 DinB superfamily 39 174 3.6E-5 T 14-10-2018 IPR024775 DinB-like domain C4901_06205 456054165507142f8069be865e73355b 713 SUPERFAMILY SSF53335 471 665 1.79E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_06205 456054165507142f8069be865e73355b 713 Gene3D G3DSA:3.40.50.150 483 662 1.7E-22 T 14-10-2018 C4901_06205 456054165507142f8069be865e73355b 713 TIGRFAM TIGR04344 ovoA_Nterm: 5-histidylcysteine sulfoxide synthase 21 458 1.7E-199 T 14-10-2018 IPR027577 5-histidylcysteine sulfoxide synthase C4901_06205 456054165507142f8069be865e73355b 713 SUPERFAMILY SSF56436 203 460 4.94E-53 T 14-10-2018 IPR016187 C-type lectin fold C4901_06205 456054165507142f8069be865e73355b 713 Pfam PF13489 Methyltransferase domain 508 673 2.3E-9 T 14-10-2018 C4901_06205 456054165507142f8069be865e73355b 713 TIGRFAM TIGR04345 ovoA_Cterm: putative 4-mercaptohistidine N1-methyltranferase 470 712 7.8E-99 T 14-10-2018 IPR027625 Putative 4-mercaptohistidine N1-methyltranferase, OvoA C-terminal domain C4901_06205 456054165507142f8069be865e73355b 713 Gene3D G3DSA:3.90.1580.10 196 467 5.2E-25 T 14-10-2018 C4901_06205 456054165507142f8069be865e73355b 713 Pfam PF03781 Sulfatase-modifying factor enzyme 1 207 458 3.3E-28 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 SUPERFAMILY SSF103025 4 277 6.44E-90 T 14-10-2018 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 Gene3D G3DSA:4.10.1250.10 232 275 7.8E-21 T 14-10-2018 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 Gene3D G3DSA:2.40.30.110 277 364 2.4E-18 T 14-10-2018 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 357 41.926 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 356 1.5E-110 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 SUPERFAMILY SSF101790 269 358 8.99E-16 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 Gene3D G3DSA:3.30.1360.120 6 231 1.4E-80 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 PIRSF PIRSF006487 1 361 2.2E-77 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 3.9E-82 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 350 2.0E-15 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 C4901_15930 3f5686d6b3bf55766a18fc97273fc753 364 Gene3D G3DSA:3.30.70.1400 51 138 1.4E-80 T 14-10-2018 C4901_02700 900375cf2cedb41ddbed89ffa6ade513 416 PIRSF PIRSF000139 23 413 5.4E-90 T 14-10-2018 C4901_02700 900375cf2cedb41ddbed89ffa6ade513 416 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 37 48 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_02700 900375cf2cedb41ddbed89ffa6ade513 416 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_02700 900375cf2cedb41ddbed89ffa6ade513 416 Gene3D G3DSA:1.10.1060.10 3 121 3.4E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_02700 900375cf2cedb41ddbed89ffa6ade513 416 Pfam PF13183 4Fe-4S dicluster domain 34 100 7.6E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_02700 900375cf2cedb41ddbed89ffa6ade513 416 SUPERFAMILY SSF46548 18 113 4.6E-18 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_02700 900375cf2cedb41ddbed89ffa6ade513 416 Pfam PF02754 Cysteine-rich domain 180 259 0.0033 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_02700 900375cf2cedb41ddbed89ffa6ade513 416 Pfam PF02754 Cysteine-rich domain 305 388 9.8E-12 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_11290 85f441149709e1c64ee0968fad0dcaf3 150 Gene3D G3DSA:1.10.10.10 100 146 5.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_11290 85f441149709e1c64ee0968fad0dcaf3 150 Hamap MF_01114 Regulatory protein RecX [recX]. 4 150 11.796 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 C4901_11290 85f441149709e1c64ee0968fad0dcaf3 150 Pfam PF02631 RecX family 32 146 3.0E-23 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 C4901_11290 85f441149709e1c64ee0968fad0dcaf3 150 Gene3D G3DSA:1.10.10.10 11 52 3.0E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_11290 85f441149709e1c64ee0968fad0dcaf3 150 Gene3D G3DSA:1.10.10.10 55 99 6.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07210 0025e09ea6b2307a4677b0e3174ff2d7 173 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 94 164 5.6E-11 T 14-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 C4901_07210 0025e09ea6b2307a4677b0e3174ff2d7 173 SUPERFAMILY SSF81296 86 168 1.7E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_07210 0025e09ea6b2307a4677b0e3174ff2d7 173 Gene3D G3DSA:2.60.40.10 83 168 3.5E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 Gene3D G3DSA:1.10.150.80 192 291 2.6E-18 T 14-10-2018 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 Gene3D G3DSA:3.30.420.10 2 186 3.3E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 SMART SM00474 2 168 1.4E-30 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 SUPERFAMILY SSF47819 189 292 1.35E-20 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 SUPERFAMILY SSF47819 293 355 5.05E-6 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 SMART SM00341 207 287 2.7E-5 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 Pfam PF00570 HRDC domain 211 277 7.9E-16 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 SUPERFAMILY SSF53098 7 204 1.39E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 TIGRFAM TIGR01388 rnd: ribonuclease D 6 351 2.4E-92 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 Hamap MF_01899 Ribonuclease D [rnd]. 2 358 35.78 T 14-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 C4901_16880 3a0012239c6a1040e8e03e3ea11d7473 368 Pfam PF01612 3'-5' exonuclease 6 168 2.6E-28 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Gene3D G3DSA:3.40.50.140 2 138 3.2E-48 T 14-10-2018 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 SMART SM00493 3 103 5.1E-29 T 14-10-2018 IPR006171 TOPRIM domain C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Gene3D G3DSA:1.10.290.10 261 396 1.4E-168 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Gene3D G3DSA:1.10.460.10 139 565 1.4E-168 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Gene3D G3DSA:3.30.65.10 577 628 1.2E-5 T 14-10-2018 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Gene3D G3DSA:3.30.65.10 629 676 1.6E-7 T 14-10-2018 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Pfam PF01751 Toprim domain 5 117 4.1E-25 T 14-10-2018 IPR006171 TOPRIM domain C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 SMART SM00436 108 196 2.2E-51 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 290 312 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 SUPERFAMILY SSF56712 3 599 7.98E-188 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 622 1.2E-233 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 SUPERFAMILY SSF57783 634 673 1.56E-11 T 14-10-2018 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 381 397 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 303 312 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 166 184 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 488 502 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.8E-37 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Gene3D G3DSA:2.70.20.10 188 472 1.4E-168 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 705 52.972 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 SMART SM00437 253 525 1.6E-117 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 589 623 2.3E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 680 717 2.3E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 638 674 2.2E-15 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 Pfam PF01131 DNA topoisomerase 133 562 4.8E-128 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_00830 76916ef969b64cbdf50a6786ac301f67 764 SUPERFAMILY SSF57783 582 627 4.76E-11 T 14-10-2018 C4901_06385 aa5f0598cf53508963dbf7a671f15093 193 SUPERFAMILY SSF48452 4 75 8.86E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_06385 aa5f0598cf53508963dbf7a671f15093 193 Pfam PF14559 Tetratricopeptide repeat 32 78 6.1E-6 T 14-10-2018 C4901_06385 aa5f0598cf53508963dbf7a671f15093 193 Gene3D G3DSA:1.25.40.10 1 117 1.6E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_00855 82b2d576629332ca04e5ed9ed641f895 85 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 83 1.7E-32 T 14-10-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 C4901_00855 82b2d576629332ca04e5ed9ed641f895 85 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 14-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 C4901_00855 82b2d576629332ca04e5ed9ed641f895 85 PRINTS PR00160 Glutaredoxin signature 61 74 3.4E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup C4901_00855 82b2d576629332ca04e5ed9ed641f895 85 PRINTS PR00160 Glutaredoxin signature 4 22 3.4E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup C4901_00855 82b2d576629332ca04e5ed9ed641f895 85 PRINTS PR00160 Glutaredoxin signature 47 60 3.4E-12 T 14-10-2018 IPR014025 Glutaredoxin subgroup C4901_00855 82b2d576629332ca04e5ed9ed641f895 85 SUPERFAMILY SSF52833 1 84 2.07E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_00855 82b2d576629332ca04e5ed9ed641f895 85 Pfam PF00462 Glutaredoxin 4 64 3.5E-20 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C4901_00855 82b2d576629332ca04e5ed9ed641f895 85 Gene3D G3DSA:3.40.30.10 1 83 6.1E-26 T 14-10-2018 C4901_06275 00e2cb211da8dcc33a9b718e148a260a 108 Pfam PF01471 Putative peptidoglycan binding domain 52 105 4.4E-12 T 14-10-2018 IPR002477 Peptidoglycan binding-like C4901_06275 00e2cb211da8dcc33a9b718e148a260a 108 Gene3D G3DSA:1.10.101.10 35 108 5.5E-13 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 C4901_06275 00e2cb211da8dcc33a9b718e148a260a 108 SUPERFAMILY SSF47090 51 105 2.51E-13 T 14-10-2018 IPR036365 PGBD-like superfamily C4901_07775 701341dcea95ced5616e0889a038ea4d 257 Gene3D G3DSA:1.10.10.10 186 254 7.9E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07775 701341dcea95ced5616e0889a038ea4d 257 SUPERFAMILY SSF75516 18 180 1.16E-23 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily C4901_07775 701341dcea95ced5616e0889a038ea4d 257 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 207 223 2.9E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_07775 701341dcea95ced5616e0889a038ea4d 257 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 223 235 2.9E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_07775 701341dcea95ced5616e0889a038ea4d 257 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 193 207 2.9E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_07775 701341dcea95ced5616e0889a038ea4d 257 ProSitePatterns PS00622 LuxR-type HTH domain signature. 207 234 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_07775 701341dcea95ced5616e0889a038ea4d 257 Pfam PF00196 Bacterial regulatory proteins, luxR family 193 247 3.1E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_07775 701341dcea95ced5616e0889a038ea4d 257 Pfam PF03472 Autoinducer binding domain 59 172 1.2E-18 T 14-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain C4901_07775 701341dcea95ced5616e0889a038ea4d 257 Gene3D G3DSA:3.30.450.80 1 179 7.8E-44 T 14-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily C4901_07775 701341dcea95ced5616e0889a038ea4d 257 SUPERFAMILY SSF46894 184 253 2.28E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C4901_07775 701341dcea95ced5616e0889a038ea4d 257 SMART SM00421 190 247 1.4E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_14900 ca83662a975f4ff3b1356b2783237334 378 SUPERFAMILY SSF51905 119 249 5.02E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_14900 ca83662a975f4ff3b1356b2783237334 378 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 289 6.1E-18 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_14900 ca83662a975f4ff3b1356b2783237334 378 SUPERFAMILY SSF51905 1 152 3.6E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_14900 ca83662a975f4ff3b1356b2783237334 378 Gene3D G3DSA:3.50.50.60 4 312 4.4E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_14900 ca83662a975f4ff3b1356b2783237334 378 Gene3D G3DSA:3.50.50.60 115 258 4.4E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_14735 e37f54624288eabd634d4a9a4c180f35 116 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 23 107 5.9E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C4901_14735 e37f54624288eabd634d4a9a4c180f35 116 Gene3D G3DSA:3.10.20.30 1 116 1.4E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_14735 e37f54624288eabd634d4a9a4c180f35 116 SUPERFAMILY SSF54292 1 112 3.03E-9 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_14735 e37f54624288eabd634d4a9a4c180f35 116 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 42 50 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 C4901_11385 9ca517defc5e8d1e710bbb27e664a2e1 388 SUPERFAMILY SSF51713 4 364 3.4E-147 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C4901_11385 9ca517defc5e8d1e710bbb27e664a2e1 388 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 11 366 3.9E-145 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C4901_11385 9ca517defc5e8d1e710bbb27e664a2e1 388 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 364 52.972 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C4901_11385 9ca517defc5e8d1e710bbb27e664a2e1 388 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 361 2.2E-84 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C4901_11385 9ca517defc5e8d1e710bbb27e664a2e1 388 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 12 365 2.0E-148 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C4901_11385 9ca517defc5e8d1e710bbb27e664a2e1 388 Gene3D G3DSA:3.20.20.105 3 368 2.4E-153 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Pfam PF10414 Sirohaem synthase dimerisation region 151 207 4.4E-20 T 14-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Gene3D G3DSA:1.10.8.210 149 210 3.5E-6 T 14-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 219 427 2.0E-49 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 SUPERFAMILY SSF51735 1 112 3.0E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Gene3D G3DSA:3.40.1010.10 215 331 1.4E-44 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 SUPERFAMILY SSF53790 215 453 3.4E-81 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Hamap MF_01646 Siroheme synthase [cysG]. 1 460 50.524 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 451 9.0E-95 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Gene3D G3DSA:3.30.160.110 113 147 2.0E-17 T 14-10-2018 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 SUPERFAMILY SSF75615 114 206 6.15E-25 T 14-10-2018 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Pfam PF14824 Sirohaem biosynthesis protein central 120 144 2.0E-7 T 14-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Gene3D G3DSA:3.40.50.720 1 112 4.6E-35 T 14-10-2018 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 PIRSF PIRSF036426 1 467 3.3E-195 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Pfam PF13241 Putative NAD(P)-binding 6 115 2.9E-28 T 14-10-2018 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 207 4.4E-66 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 C4901_06900 7a8eea6c3536215d5d71961b88477917 469 Gene3D G3DSA:3.30.950.10 332 467 1.2E-47 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 Pfam PF01628 HrcA protein C terminal domain 105 327 1.1E-58 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 Gene3D G3DSA:1.10.10.10 1 85 3.4E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 3 334 27.718 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 4 75 2.2E-6 T 14-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 SUPERFAMILY SSF55781 73 342 1.53E-59 T 14-10-2018 C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 Gene3D G3DSA:3.30.390.60 129 232 1.8E-42 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 SUPERFAMILY SSF46785 4 81 5.55E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 PIRSF PIRSF005485 1 344 7.6E-109 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 5 339 1.1E-96 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 C4901_04470 6fbd88a8e95c3543a0a569d37aeb508f 347 Gene3D G3DSA:3.30.450.40 106 339 1.8E-42 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_15995 d4d31cdf295d7864cf74b7f4a39a3c9a 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 253 9.9E-73 T 14-10-2018 C4901_15995 d4d31cdf295d7864cf74b7f4a39a3c9a 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 246 3.0E-20 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C4901_15995 d4d31cdf295d7864cf74b7f4a39a3c9a 258 SUPERFAMILY SSF56219 1 254 3.8E-74 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C4901_15995 d4d31cdf295d7864cf74b7f4a39a3c9a 258 Gene3D G3DSA:3.60.10.10 1 254 1.2E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C4901_15995 d4d31cdf295d7864cf74b7f4a39a3c9a 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 253 2.5E-74 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 C4901_15995 d4d31cdf295d7864cf74b7f4a39a3c9a 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 C4901_02480 465bbca07c60725c35bef6dd20c5a8c4 97 SUPERFAMILY SSF47413 8 86 4.69E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_02480 465bbca07c60725c35bef6dd20c5a8c4 97 Pfam PF01381 Helix-turn-helix 18 66 1.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_02480 465bbca07c60725c35bef6dd20c5a8c4 97 SMART SM00530 12 68 4.9E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_02480 465bbca07c60725c35bef6dd20c5a8c4 97 Gene3D G3DSA:1.10.260.40 2 95 4.1E-31 T 14-10-2018 C4901_02480 465bbca07c60725c35bef6dd20c5a8c4 97 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 83 1.7E-32 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 C4901_04990 dad8ad008a9bbab10bc4624a282c3e64 311 Gene3D G3DSA:1.10.40.60 98 201 3.2E-45 T 14-10-2018 IPR038072 GspK, central domain superfamily C4901_04990 dad8ad008a9bbab10bc4624a282c3e64 311 Gene3D G3DSA:1.10.40.60 202 260 3.2E-45 T 14-10-2018 IPR038072 GspK, central domain superfamily C4901_04990 dad8ad008a9bbab10bc4624a282c3e64 311 PIRSF PIRSF002786 1 304 2.1E-64 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 C4901_04990 dad8ad008a9bbab10bc4624a282c3e64 311 SUPERFAMILY SSF54523 37 296 6.59E-10 T 14-10-2018 C4901_04990 dad8ad008a9bbab10bc4624a282c3e64 311 SUPERFAMILY SSF158544 100 199 1.36E-20 T 14-10-2018 IPR038072 GspK, central domain superfamily C4901_04990 dad8ad008a9bbab10bc4624a282c3e64 311 Pfam PF03934 Type II secretion system (T2SS), protein K 32 292 4.4E-63 T 14-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 C4901_04990 dad8ad008a9bbab10bc4624a282c3e64 311 Gene3D G3DSA:3.30.1300.30 43 285 3.2E-45 T 14-10-2018 C4901_01385 b8c35cfc908fe31e9253b53aa09c4466 225 Hamap MF_00013 Octanoyltransferase [lipB]. 5 205 33.62 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C4901_01385 b8c35cfc908fe31e9253b53aa09c4466 225 PIRSF PIRSF016262 1 214 3.2E-54 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C4901_01385 b8c35cfc908fe31e9253b53aa09c4466 225 SUPERFAMILY SSF55681 9 202 1.41E-57 T 14-10-2018 C4901_01385 b8c35cfc908fe31e9253b53aa09c4466 225 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 30 199 8.1E-51 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C4901_01385 b8c35cfc908fe31e9253b53aa09c4466 225 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C4901_01385 b8c35cfc908fe31e9253b53aa09c4466 225 Gene3D G3DSA:3.30.930.10 2 203 7.4E-57 T 14-10-2018 C4901_01385 b8c35cfc908fe31e9253b53aa09c4466 225 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 73 127 2.0E-11 T 14-10-2018 C4901_01385 b8c35cfc908fe31e9253b53aa09c4466 225 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 158 1.6E-5 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C4901_12320 9d65bdf3a1f1d38bd8bb32c69f1f1c0f 350 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_12320 9d65bdf3a1f1d38bd8bb32c69f1f1c0f 350 SUPERFAMILY SSF51556 3 345 3.77E-134 T 14-10-2018 IPR032466 Metal-dependent hydrolase C4901_12320 9d65bdf3a1f1d38bd8bb32c69f1f1c0f 350 Gene3D G3DSA:3.20.20.140 2 347 1.6E-102 T 14-10-2018 C4901_12320 9d65bdf3a1f1d38bd8bb32c69f1f1c0f 350 Pfam PF01979 Amidohydrolase family 10 308 1.1E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C4901_12320 9d65bdf3a1f1d38bd8bb32c69f1f1c0f 350 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 3 344 1.3E-129 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_12320 9d65bdf3a1f1d38bd8bb32c69f1f1c0f 350 PIRSF PIRSF001237 1 348 4.3E-133 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_12320 9d65bdf3a1f1d38bd8bb32c69f1f1c0f 350 Hamap MF_00219 Dihydroorotase [pyrC]. 1 346 44.95 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_07405 4a0eb0ba5bcd6bba720c07b3f31f58f1 163 Gene3D G3DSA:3.30.530.20 8 161 9.2E-25 T 14-10-2018 IPR023393 START-like domain superfamily C4901_07405 4a0eb0ba5bcd6bba720c07b3f31f58f1 163 SUPERFAMILY SSF55961 6 154 6.72E-23 T 14-10-2018 C4901_07405 4a0eb0ba5bcd6bba720c07b3f31f58f1 163 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 18 153 4.5E-11 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like C4901_08825 87ad9728446f21e66c55b2617e739c34 318 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 317 1.3E-131 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C4901_08825 87ad9728446f21e66c55b2617e739c34 318 SUPERFAMILY SSF53901 3 318 4.05E-70 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_08825 87ad9728446f21e66c55b2617e739c34 318 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 229 318 1.5E-36 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C4901_08825 87ad9728446f21e66c55b2617e739c34 318 Gene3D G3DSA:3.40.47.10 1 318 1.3E-130 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_08825 87ad9728446f21e66c55b2617e739c34 318 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 8.9E-35 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C4901_08825 87ad9728446f21e66c55b2617e739c34 318 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 318 73.185 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 C4901_07805 daac0b01e4adb15cde4e061393080bc1 153 Pfam PF02082 Transcriptional regulator 1 82 3.0E-25 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C4901_07805 daac0b01e4adb15cde4e061393080bc1 153 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.7E-34 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C4901_07805 daac0b01e4adb15cde4e061393080bc1 153 Gene3D G3DSA:1.10.10.10 1 140 7.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07805 daac0b01e4adb15cde4e061393080bc1 153 SUPERFAMILY SSF46785 2 135 2.54E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_09000 65186f1f15c910f7970e245a7591c947 287 Pfam PF05175 Methyltransferase small domain 102 188 9.7E-10 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 C4901_09000 65186f1f15c910f7970e245a7591c947 287 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 176 182 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C4901_09000 65186f1f15c910f7970e245a7591c947 287 SUPERFAMILY SSF53335 48 237 1.48E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_09000 65186f1f15c910f7970e245a7591c947 287 Gene3D G3DSA:3.40.50.150 68 280 3.4E-49 T 14-10-2018 C4901_09000 65186f1f15c910f7970e245a7591c947 287 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 22 273 8.7E-53 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 C4901_15970 3296e8ae43ca0a8310316046595fdad2 425 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 59 399 6.0E-91 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 C4901_15970 3296e8ae43ca0a8310316046595fdad2 425 Gene3D G3DSA:3.40.50.2000 221 386 3.5E-111 T 14-10-2018 C4901_15970 3296e8ae43ca0a8310316046595fdad2 425 SUPERFAMILY SSF53756 37 402 3.45E-96 T 14-10-2018 C4901_15970 3296e8ae43ca0a8310316046595fdad2 425 Gene3D G3DSA:3.40.50.2000 39 397 3.5E-111 T 14-10-2018 C4901_15970 3296e8ae43ca0a8310316046595fdad2 425 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 37 400 2.3E-102 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 C4901_07755 94cb79e2a037c9d974b1aabf6020a3ad 398 SUPERFAMILY SSF53901 210 395 3.64E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_07755 94cb79e2a037c9d974b1aabf6020a3ad 398 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 154 170 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site C4901_07755 94cb79e2a037c9d974b1aabf6020a3ad 398 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 249 353 2.1E-22 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal C4901_07755 94cb79e2a037c9d974b1aabf6020a3ad 398 SUPERFAMILY SSF53901 5 236 2.91E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_07755 94cb79e2a037c9d974b1aabf6020a3ad 398 Gene3D G3DSA:3.40.47.10 10 251 2.9E-31 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_07755 94cb79e2a037c9d974b1aabf6020a3ad 398 Gene3D G3DSA:3.40.47.10 252 393 2.0E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_07755 94cb79e2a037c9d974b1aabf6020a3ad 398 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 88 235 1.3E-21 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal C4901_07755 94cb79e2a037c9d974b1aabf6020a3ad 398 SMART SM00825 Beta-ketoacyl synthase 48 396 2.5E-8 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 Pfam PF13522 Glutamine amidotransferase domain 61 208 5.7E-19 T 14-10-2018 C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 Gene3D G3DSA:3.60.20.10 2 412 3.7E-153 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 464 4.7E-159 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 Gene3D G3DSA:3.40.50.2020 277 441 3.7E-153 T 14-10-2018 C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 Pfam PF00156 Phosphoribosyl transferase domain 276 393 1.6E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 PIRSF PIRSF000485 1 481 4.7E-162 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 464 44.978 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 SUPERFAMILY SSF53271 250 483 1.22E-72 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C4901_12780 b4a1a6929baa3bd8367ea7c32b027b46 503 SUPERFAMILY SSF56235 2 257 9.44E-72 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_16270 fc639accdb8daf3568886d71c4016d2c 358 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 146 162 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C4901_16270 fc639accdb8daf3568886d71c4016d2c 358 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 11 351 5.7E-126 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C4901_16270 fc639accdb8daf3568886d71c4016d2c 358 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 10 353 48.043 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C4901_16270 fc639accdb8daf3568886d71c4016d2c 358 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 26 35 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C4901_16270 fc639accdb8daf3568886d71c4016d2c 358 Gene3D G3DSA:3.20.20.210 5 356 6.0E-144 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C4901_16270 fc639accdb8daf3568886d71c4016d2c 358 SUPERFAMILY SSF51726 10 354 1.73E-109 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C4901_16270 fc639accdb8daf3568886d71c4016d2c 358 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 13 350 9.6E-127 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 592 662 1.5E-12 T 14-10-2018 IPR001357 BRCT domain C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Gene3D G3DSA:1.10.150.20 432 505 3.5E-27 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 434 8.1E-9 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 660 3.0E-243 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Gene3D G3DSA:1.10.287.610 1 72 2.0E-28 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Gene3D G3DSA:2.40.50.140 319 391 1.4E-31 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 8 319 1.0E-120 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Gene3D G3DSA:3.40.50.10190 585 667 6.3E-25 T 14-10-2018 IPR036420 BRCT domain superfamily C4901_07960 5acee0425f216f51250e3b3532947bcf 675 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 1.0E-33 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Gene3D G3DSA:3.30.470.90 73 318 5.1E-94 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SMART SM00292 591 668 2.0E-14 T 14-10-2018 IPR001357 BRCT domain C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Pfam PF12826 Helix-hairpin-helix motif 510 573 3.0E-24 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Hamap MF_01588 DNA ligase [ligA]. 4 665 52.568 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 PIRSF PIRSF001604 1 669 2.3E-235 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Gene3D G3DSA:2.20.70.80 392 431 4.6E-15 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SMART SM00278 480 499 160.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SMART SM00278 446 465 23.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SMART SM00278 544 563 82.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SMART SM00278 512 531 93.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SUPERFAMILY SSF56091 4 317 2.52E-113 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SUPERFAMILY SSF52113 590 668 1.46E-18 T 14-10-2018 IPR036420 BRCT domain superfamily C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SUPERFAMILY SSF47781 405 583 1.48E-59 T 14-10-2018 IPR010994 RuvA domain 2-like C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Pfam PF14520 Helix-hairpin-helix domain 446 498 3.9E-6 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 Gene3D G3DSA:1.10.150.20 506 584 2.8E-30 T 14-10-2018 C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SUPERFAMILY SSF50249 318 402 3.77E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_07960 5acee0425f216f51250e3b3532947bcf 675 SMART SM00532 5 448 3.0E-250 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Gene3D G3DSA:3.50.50.60 534 875 1.2E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Pfam PF00364 Biotin-requiring enzyme 112 181 6.1E-13 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Pfam PF00364 Biotin-requiring enzyme 7 78 3.5E-14 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 134 163 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 534 869 5.1E-59 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Gene3D G3DSA:3.30.559.10 284 502 1.7E-54 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 891 993 2.6E-27 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Gene3D G3DSA:3.30.390.30 884 1002 5.2E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Pfam PF02817 e3 binding domain 241 273 5.5E-10 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 SUPERFAMILY SSF47005 234 276 9.81E-8 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 718 743 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 807 821 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 849 856 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 949 964 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 971 991 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 682 691 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 567 582 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 884 905 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 534 556 1.6E-47 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Gene3D G3DSA:2.40.50.100 5 103 7.1E-25 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Gene3D G3DSA:2.40.50.100 104 207 1.9E-22 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 SUPERFAMILY SSF51230 4 97 7.33E-23 T 14-10-2018 IPR011053 Single hybrid motif C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 296 495 8.8E-48 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 SUPERFAMILY SSF51905 523 879 4.78E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Gene3D G3DSA:3.50.50.60 698 820 1.2E-93 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 568 578 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 SUPERFAMILY SSF55424 891 1001 1.89E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 535 554 9.9E-28 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 718 736 9.9E-28 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 806 822 9.9E-28 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 834 856 9.9E-28 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 679 697 9.9E-28 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 SUPERFAMILY SSF52777 295 496 7.12E-52 T 14-10-2018 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 Gene3D G3DSA:4.10.320.10 238 277 2.9E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 29 58 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C4901_03855 09889b9b80a10dd0019a3c639c809aab 1012 SUPERFAMILY SSF51230 111 202 3.53E-21 T 14-10-2018 IPR011053 Single hybrid motif C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 SUPERFAMILY SSF54570 3 84 9.68E-34 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 5.7E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 5.7E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 5.7E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 Gene3D G3DSA:3.30.860.10 1 91 1.9E-38 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 PIRSF PIRSF002144 1 91 1.1E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 89 2.5E-42 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 Pfam PF00203 Ribosomal protein S19 3 83 8.6E-34 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14105 f466a8da9ff9210b2ecba61db914e2af 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.302 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_06675 e9d523a2c1046490483fe1c5d9047857 415 Gene3D G3DSA:3.40.50.2000 25 188 8.4E-79 T 14-10-2018 C4901_06675 e9d523a2c1046490483fe1c5d9047857 415 Gene3D G3DSA:3.40.50.2000 189 377 8.4E-79 T 14-10-2018 C4901_06675 e9d523a2c1046490483fe1c5d9047857 415 Pfam PF00534 Glycosyl transferases group 1 213 370 1.2E-39 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_06675 e9d523a2c1046490483fe1c5d9047857 415 Pfam PF13439 Glycosyltransferase Family 4 29 188 2.3E-14 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C4901_06675 e9d523a2c1046490483fe1c5d9047857 415 SUPERFAMILY SSF53756 17 392 5.23E-83 T 14-10-2018 C4901_01755 97494d01539c989b572d06f62e0a1f58 572 SMART SM00382 321 442 2.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01755 97494d01539c989b572d06f62e0a1f58 572 Gene3D G3DSA:3.30.300.160 69 149 1.3E-5 T 14-10-2018 C4901_01755 97494d01539c989b572d06f62e0a1f58 572 Gene3D G3DSA:3.40.50.300 295 570 2.2E-101 T 14-10-2018 C4901_01755 97494d01539c989b572d06f62e0a1f58 572 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 48 153 6.0E-22 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C4901_01755 97494d01539c989b572d06f62e0a1f58 572 SUPERFAMILY SSF160246 10 150 2.62E-39 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C4901_01755 97494d01539c989b572d06f62e0a1f58 572 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 388 402 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_01755 97494d01539c989b572d06f62e0a1f58 572 Pfam PF00437 Type II/IV secretion system protein 197 460 3.6E-79 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_01755 97494d01539c989b572d06f62e0a1f58 572 SUPERFAMILY SSF52540 180 567 7.29E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01755 97494d01539c989b572d06f62e0a1f58 572 Gene3D G3DSA:3.30.450.90 160 293 1.3E-44 T 14-10-2018 C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 Pfam PF01743 Poly A polymerase head domain 3 122 3.0E-18 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 PIRSF PIRSF000813 1 403 7.1E-172 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 403 48.313 T 14-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 Gene3D G3DSA:3.30.460.10 1 122 5.6E-28 T 14-10-2018 C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 SUPERFAMILY SSF81891 120 358 2.22E-49 T 14-10-2018 C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 SUPERFAMILY SSF81301 1 118 4.14E-30 T 14-10-2018 C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 146 209 1.3E-9 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 Pfam PF01966 HD domain 227 302 1.1E-5 T 14-10-2018 IPR006674 HD domain C4901_15845 6ea7bdc6a94b1dbf525dcdc1c3eca328 403 Gene3D G3DSA:1.10.3090.10 123 402 1.4E-36 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 16 206 9.1E-43 T 14-10-2018 IPR003111 Lon, substrate-binding domain C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Gene3D G3DSA:3.40.50.300 319 495 2.8E-62 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 SUPERFAMILY SSF52540 318 590 3.69E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Gene3D G3DSA:2.30.130.40 3 122 4.3E-35 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 SMART SM00382 353 497 1.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 357 494 9.6E-18 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Hamap MF_01973 Lon protease [lon]. 16 777 71.948 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 TIGRFAM TIGR00763 lon: endopeptidase La 17 776 4.9E-304 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 SUPERFAMILY SSF88697 16 206 7.7E-50 T 14-10-2018 IPR015947 PUA-like superfamily C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 SUPERFAMILY SSF54211 600 775 1.25E-57 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 575 777 5.6E-97 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Gene3D G3DSA:1.10.8.60 496 589 8.1E-31 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 361 380 2.0E-56 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 600 616 2.0E-56 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 708 727 2.0E-56 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 678 697 2.0E-56 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 731 749 2.0E-56 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 PIRSF PIRSF001174 3 780 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Gene3D G3DSA:3.30.230.10 590 777 1.8E-81 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 Gene3D G3DSA:1.20.58.1480 126 249 1.5E-45 T 14-10-2018 C4901_05790 b8813931cce5b7b439b4f6977eeef909 805 SMART SM00464 15 207 1.4E-74 T 14-10-2018 IPR003111 Lon, substrate-binding domain C4901_04605 95a7253e498772a909e1009e75121123 101 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 101 20.9 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 C4901_04605 95a7253e498772a909e1009e75121123 101 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 96 3.3E-23 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like C4901_08155 54191fcc6bed045042ae725d404954c0 441 Gene3D G3DSA:3.40.50.150 134 440 2.6E-84 T 14-10-2018 C4901_08155 54191fcc6bed045042ae725d404954c0 441 Pfam PF01189 16S rRNA methyltransferase RsmB/F 236 438 3.1E-49 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 C4901_08155 54191fcc6bed045042ae725d404954c0 441 SUPERFAMILY SSF53335 128 440 1.86E-74 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_08155 54191fcc6bed045042ae725d404954c0 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 423 440 4.6E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_08155 54191fcc6bed045042ae725d404954c0 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 217 231 4.6E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_08155 54191fcc6bed045042ae725d404954c0 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 365 381 4.6E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_08155 54191fcc6bed045042ae725d404954c0 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 246 256 4.6E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_08155 54191fcc6bed045042ae725d404954c0 441 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 315 327 4.6E-29 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_00210 b04034ba7a5933d4b8210441099cb705 143 Gene3D G3DSA:3.30.428.10 12 133 2.3E-31 T 14-10-2018 IPR036265 HIT-like superfamily C4901_00210 b04034ba7a5933d4b8210441099cb705 143 SUPERFAMILY SSF54197 5 116 2.04E-29 T 14-10-2018 IPR036265 HIT-like superfamily C4901_00210 b04034ba7a5933d4b8210441099cb705 143 Pfam PF01230 HIT domain 19 100 1.7E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 SUPERFAMILY SSF51011 559 661 4.68E-31 T 14-10-2018 C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 56 141 1.6E-18 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 Gene3D G3DSA:3.20.20.80 157 558 4.5E-165 T 14-10-2018 C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 Pfam PF00128 Alpha amylase, catalytic domain 213 282 1.5E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 PIRSF PIRSF000463 31 667 1.8E-276 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 SMART SM00642 184 563 6.5E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 41 660 1.6E-274 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 SUPERFAMILY SSF51445 105 553 2.02E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 Gene3D G3DSA:2.60.40.10 32 155 7.2E-41 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 Gene3D G3DSA:2.60.40.1180 559 663 5.0E-34 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 564 662 8.9E-19 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 C4901_06035 6b69e40562736d337ea44ca748d05e9f 670 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 37 663 43.766 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 SUPERFAMILY SSF51011 559 661 4.68E-31 T 14-10-2018 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 56 141 1.6E-18 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 Gene3D G3DSA:3.20.20.80 157 558 4.5E-165 T 14-10-2018 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 Pfam PF00128 Alpha amylase, catalytic domain 213 282 1.5E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 PIRSF PIRSF000463 31 667 1.8E-276 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 SMART SM00642 184 563 6.5E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 41 660 1.6E-274 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 SUPERFAMILY SSF51445 105 553 2.02E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 Gene3D G3DSA:2.60.40.10 32 155 7.2E-41 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 Gene3D G3DSA:2.60.40.1180 559 663 5.0E-34 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 564 662 8.9E-19 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 C4901_05980 6b69e40562736d337ea44ca748d05e9f 670 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 37 663 43.766 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 51.296 T 14-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 Gene3D G3DSA:3.40.50.300 225 387 2.8E-44 T 14-10-2018 C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 SMART SM00487 28 234 7.7E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 SUPERFAMILY SSF52540 84 363 6.41E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 Gene3D G3DSA:3.40.50.300 2 223 1.1E-69 T 14-10-2018 C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 Pfam PF00270 DEAD/DEAH box helicase 33 205 7.9E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 Pfam PF00271 Helicase conserved C-terminal domain 243 351 2.6E-27 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site C4901_00425 4f0d36cd89688eaa574051fe1c58e47d 476 SMART SM00490 270 351 6.9E-30 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_07840 61a0c4cda47a77d34387a683861be326 495 Gene3D G3DSA:2.30.42.10 408 495 1.2E-12 T 14-10-2018 C4901_07840 61a0c4cda47a77d34387a683861be326 495 Gene3D G3DSA:2.30.42.10 297 402 9.7E-23 T 14-10-2018 C4901_07840 61a0c4cda47a77d34387a683861be326 495 Gene3D G3DSA:2.40.10.120 60 289 3.4E-71 T 14-10-2018 C4901_07840 61a0c4cda47a77d34387a683861be326 495 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 62 491 3.7E-126 T 14-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 C4901_07840 61a0c4cda47a77d34387a683861be326 495 SUPERFAMILY SSF50494 59 285 4.61E-57 T 14-10-2018 IPR009003 Peptidase S1, PA clan C4901_07840 61a0c4cda47a77d34387a683861be326 495 PRINTS PR00834 HtrA/DegQ protease family signature 229 246 3.0E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07840 61a0c4cda47a77d34387a683861be326 495 PRINTS PR00834 HtrA/DegQ protease family signature 337 349 3.0E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07840 61a0c4cda47a77d34387a683861be326 495 PRINTS PR00834 HtrA/DegQ protease family signature 251 268 3.0E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07840 61a0c4cda47a77d34387a683861be326 495 PRINTS PR00834 HtrA/DegQ protease family signature 155 175 3.0E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07840 61a0c4cda47a77d34387a683861be326 495 PRINTS PR00834 HtrA/DegQ protease family signature 195 219 3.0E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07840 61a0c4cda47a77d34387a683861be326 495 PRINTS PR00834 HtrA/DegQ protease family signature 134 146 3.0E-39 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_07840 61a0c4cda47a77d34387a683861be326 495 SUPERFAMILY SSF50156 426 494 3.68E-12 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_07840 61a0c4cda47a77d34387a683861be326 495 Pfam PF13365 Trypsin-like peptidase domain 125 258 6.6E-31 T 14-10-2018 C4901_07840 61a0c4cda47a77d34387a683861be326 495 SUPERFAMILY SSF50156 255 380 6.44E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_07840 61a0c4cda47a77d34387a683861be326 495 Pfam PF13180 PDZ domain 298 388 1.5E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_07840 61a0c4cda47a77d34387a683861be326 495 SMART SM00228 406 485 0.021 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_07840 61a0c4cda47a77d34387a683861be326 495 SMART SM00228 297 379 1.2E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_15790 e374ab801c81f100269a91a14313db5c 128 SUPERFAMILY SSF55620 10 125 8.89E-35 T 14-10-2018 C4901_15790 e374ab801c81f100269a91a14313db5c 128 Pfam PF02152 Dihydroneopterin aldolase 14 121 1.2E-31 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C4901_15790 e374ab801c81f100269a91a14313db5c 128 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 13 122 1.3E-22 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C4901_15790 e374ab801c81f100269a91a14313db5c 128 Gene3D G3DSA:3.30.1130.10 5 126 7.5E-40 T 14-10-2018 C4901_15790 e374ab801c81f100269a91a14313db5c 128 SMART SM00905 13 123 1.1E-41 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C4901_15790 e374ab801c81f100269a91a14313db5c 128 TIGRFAM TIGR00526 folB_dom: FolB domain 11 126 8.9E-31 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 C4901_10100 fc3b105ceeb49cfbcfdc1ebb1f584875 83 SUPERFAMILY SSF159133 1 81 7.72E-26 T 14-10-2018 IPR036677 EutN/Ccml superfamily C4901_10100 fc3b105ceeb49cfbcfdc1ebb1f584875 83 TIGRFAM TIGR02703 carboxysome_A: carboxysome peptide A 1 81 1.4E-49 T 14-10-2018 IPR014076 Carboxysome peptide A C4901_10100 fc3b105ceeb49cfbcfdc1ebb1f584875 83 Gene3D G3DSA:2.40.50.220 1 83 1.7E-33 T 14-10-2018 IPR036677 EutN/Ccml superfamily C4901_10100 fc3b105ceeb49cfbcfdc1ebb1f584875 83 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 81 2.0E-30 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml C4901_10100 fc3b105ceeb49cfbcfdc1ebb1f584875 83 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 78 3.0E-22 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml C4901_00265 80d39a7c54a7c8198f4fe79e187aa24e 426 Gene3D G3DSA:3.40.50.2000 214 399 4.2E-66 T 14-10-2018 C4901_00265 80d39a7c54a7c8198f4fe79e187aa24e 426 SUPERFAMILY SSF53756 52 396 9.42E-16 T 14-10-2018 C4901_00265 80d39a7c54a7c8198f4fe79e187aa24e 426 Pfam PF00534 Glycosyl transferases group 1 289 392 7.9E-7 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_00265 80d39a7c54a7c8198f4fe79e187aa24e 426 Gene3D G3DSA:3.40.50.11720 40 206 1.1E-44 T 14-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 C4901_00265 80d39a7c54a7c8198f4fe79e187aa24e 426 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 32 207 1.2E-59 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Gene3D G3DSA:3.10.20.740 1 123 3.0E-42 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Gene3D G3DSA:3.30.70.20 125 204 4.9E-7 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 98 110 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 83 121 1.1E-16 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Pfam PF01568 Molydopterin dinucleotide binding domain 698 767 1.3E-5 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Pfam PF00384 Molybdopterin oxidoreductase 272 408 8.5E-17 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Pfam PF00384 Molybdopterin oxidoreductase 550 643 1.3E-18 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 SMART SM00929 83 123 5.9E-21 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 145 155 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 76 9.6E-20 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Gene3D G3DSA:2.40.40.20 693 781 1.0E-5 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 SUPERFAMILY SSF54292 1 73 1.12E-18 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Gene3D G3DSA:3.40.228.10 345 409 3.7E-19 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 SUPERFAMILY SSF50692 699 774 1.04E-5 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Gene3D G3DSA:3.40.50.740 281 344 3.7E-19 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 Gene3D G3DSA:3.40.50.740 515 674 1.8E-24 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 SUPERFAMILY SSF53706 213 664 1.21E-85 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 SUPERFAMILY SSF54862 76 211 7.11E-38 T 14-10-2018 C4901_04585 1daee5d44ae0672b52ee345348383dba 783 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 640 2.6E-196 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_16565 c714a7718d1b44460b376c1432f701fb 402 Pfam PF13372 Alginate export 43 162 7.0E-9 T 14-10-2018 IPR025388 Alginate export domain C4901_06690 a5ccfe99ec576ed85a6080855bb29adf 376 Gene3D G3DSA:3.90.25.10 192 354 5.3E-160 T 14-10-2018 C4901_06690 a5ccfe99ec576ed85a6080855bb29adf 376 SUPERFAMILY SSF51735 2 356 2.85E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_06690 a5ccfe99ec576ed85a6080855bb29adf 376 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 360 56.191 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 C4901_06690 a5ccfe99ec576ed85a6080855bb29adf 376 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 350 1.4E-152 T 14-10-2018 IPR016040 NAD(P)-binding domain C4901_06690 a5ccfe99ec576ed85a6080855bb29adf 376 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 357 2.8E-173 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 C4901_06690 a5ccfe99ec576ed85a6080855bb29adf 376 Gene3D G3DSA:3.40.50.720 4 341 5.3E-160 T 14-10-2018 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 SUPERFAMILY SSF50677 205 409 5.62E-45 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 30 645 1.2E-187 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 52 63 6.0E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 407 422 6.0E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 532 545 6.0E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 6.0E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 566 575 6.0E-31 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 Gene3D G3DSA:1.10.730.20 645 932 2.0E-89 T 14-10-2018 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 59 70 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 Pfam PF08264 Anticodon-binding domain of tRNA 690 840 2.8E-24 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 SUPERFAMILY SSF47323 657 931 4.3E-67 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 16 846 6.7E-254 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 SUPERFAMILY SSF52374 4 653 5.41E-131 T 14-10-2018 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 Gene3D G3DSA:3.40.50.620 26 634 9.0E-218 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 Gene3D G3DSA:3.90.740.10 196 414 9.0E-218 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C4901_05160 766b1607d4f95e88cebe04ce964fbe97 940 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 3 931 20.248 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 SUPERFAMILY SSF51621 468 799 5.76E-92 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 SUPERFAMILY SSF56059 4 389 3.88E-96 T 14-10-2018 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 Gene3D G3DSA:3.30.470.20 196 364 8.5E-54 T 14-10-2018 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 7 798 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 PIRSF PIRSF000854 1 802 0.0 T 14-10-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484|MetaCyc: PWY-6142 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 SUPERFAMILY SSF52009 358 473 2.09E-29 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 Pfam PF00391 PEP-utilising enzyme, mobile domain 391 462 6.8E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 702 717 4.7E-6 T 14-10-2018 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 755 767 4.7E-6 T 14-10-2018 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 719 734 4.7E-6 T 14-10-2018 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 421 432 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 19 351 1.4E-107 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 Gene3D G3DSA:3.20.20.60 485 796 5.2E-96 T 14-10-2018 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 486 796 3.7E-58 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 Gene3D G3DSA:3.30.1490.20 3 195 7.5E-63 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 702 720 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 C4901_06190 b2b20f889465e932d7f1ecc77d7d4b13 816 Gene3D G3DSA:3.50.30.10 377 484 8.1E-34 T 14-10-2018 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 Pfam PF01084 Ribosomal protein S18 19 68 1.6E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 71 9.8E-32 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 19.619 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 SUPERFAMILY SSF46911 3 73 6.15E-26 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 70 5.0E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 2.6E-15 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 2.6E-15 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 2.6E-15 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 2.6E-15 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08705 793dfcab1ce3fc8d06f7b62091a6d7ef 75 Gene3D G3DSA:4.10.640.10 20 75 1.0E-24 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_11940 55a2ef80c52ff234ffdc24395f9c68ae 249 Hamap MF_01963 S-methyl-5'-thioadenosine phosphorylase [mtnP]. 2 249 35.831 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 C4901_11940 55a2ef80c52ff234ffdc24395f9c68ae 249 Pfam PF01048 Phosphorylase superfamily 4 243 1.9E-45 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 C4901_11940 55a2ef80c52ff234ffdc24395f9c68ae 249 SUPERFAMILY SSF53167 3 246 1.2E-80 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 C4901_11940 55a2ef80c52ff234ffdc24395f9c68ae 249 TIGRFAM TIGR01694 MTAP: methylthioadenosine phosphorylase 4 244 1.8E-90 T 14-10-2018 IPR010044 Methylthioadenosine phosphorylase (MTAP) GO:0017061 Reactome: R-HSA-1237112|Reactome: R-HSA-8950505 C4901_11940 55a2ef80c52ff234ffdc24395f9c68ae 249 Gene3D G3DSA:3.40.50.1580 1 248 2.5E-83 T 14-10-2018 C4901_01350 884f5810e606a84604691bc276488a79 229 Gene3D G3DSA:1.20.120.520 111 223 5.1E-8 T 14-10-2018 C4901_01350 884f5810e606a84604691bc276488a79 229 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 24 69 1.8E-6 T 14-10-2018 IPR018720 Domain of unknown function DUF2249 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 SUPERFAMILY SSF57783 5 98 9.86E-36 T 14-10-2018 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 SMART SM00766 448 571 7.1E-17 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Gene3D G3DSA:3.90.980.10 110 236 1.7E-43 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 SMART SM00493 255 326 5.9E-23 T 14-10-2018 IPR006171 TOPRIM domain C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Gene3D G3DSA:3.40.1360.10 237 363 4.9E-42 T 14-10-2018 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Pfam PF08275 DNA primase catalytic core, N-terminal domain 121 247 2.6E-40 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 SUPERFAMILY SSF117023 447 571 2.09E-19 T 14-10-2018 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Pfam PF01807 CHC2 zinc finger 6 99 1.8E-38 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Gene3D G3DSA:3.90.580.10 1 100 1.2E-37 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 SMART SM00400 36 90 3.7E-35 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Pfam PF13662 Toprim domain 256 321 4.9E-16 T 14-10-2018 IPR006171 TOPRIM domain C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 TIGRFAM TIGR01391 dnaG: DNA primase 5 412 7.4E-136 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Hamap MF_00974 DNA primase [dnaG]. 4 572 28.37 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Pfam PF08278 DNA primase DnaG DnaB-binding 449 567 9.9E-20 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Gene3D G3DSA:1.10.860.10 436 576 1.2E-22 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Pfam PF10410 DnaB-helicase binding domain of primase 366 414 4.0E-9 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 Gene3D G3DSA:1.20.50.20 364 418 1.0E-9 T 14-10-2018 C4901_15765 51ec3859116ae2de08a82fd8c79a289e 578 SUPERFAMILY SSF56731 111 415 1.03E-102 T 14-10-2018 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 SUPERFAMILY SSF57716 220 271 2.34E-16 T 14-10-2018 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 272 41.091 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 132 221 1.2E-20 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 116 9.7E-28 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 SUPERFAMILY SSF81624 2 137 2.49E-36 T 14-10-2018 IPR035937 MutM-like, N-terminal C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 SMART SM00898 2 118 2.8E-43 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 SMART SM01232 132 224 2.4E-41 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 Gene3D G3DSA:3.20.190.10 2 130 6.5E-33 T 14-10-2018 IPR035937 MutM-like, N-terminal C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 ProSitePatterns PS01242 Zinc finger FPG-type signature. 247 271 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 Gene3D G3DSA:1.10.8.50 134 272 5.2E-45 T 14-10-2018 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 5.5E-79 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 Pfam PF06827 Zinc finger found in FPG and IleRS 244 272 1.6E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 C4901_01930 6dc64d860d7df38f6772f6beaee48766 272 SUPERFAMILY SSF46946 133 223 5.3E-27 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 C4901_00415 2b22d72a419857033140d8624c3a757a 437 SMART SM00959 1 31 7.2E-6 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 C4901_00415 2b22d72a419857033140d8624c3a757a 437 SMART SM00959 32 66 0.031 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 C4901_00415 2b22d72a419857033140d8624c3a757a 437 Pfam PF07497 Rho termination factor, RNA-binding domain 71 144 3.4E-32 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 C4901_00415 2b22d72a419857033140d8624c3a757a 437 Gene3D G3DSA:3.40.50.300 149 436 8.6E-131 T 14-10-2018 C4901_00415 2b22d72a419857033140d8624c3a757a 437 SMART SM00357 71 137 5.2E-19 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C4901_00415 2b22d72a419857033140d8624c3a757a 437 Pfam PF07498 Rho termination factor, N-terminal domain 43 66 1.1E-9 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 C4901_00415 2b22d72a419857033140d8624c3a757a 437 Pfam PF07498 Rho termination factor, N-terminal domain 1 31 4.6E-12 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 C4901_00415 2b22d72a419857033140d8624c3a757a 437 Gene3D G3DSA:2.40.50.140 67 142 2.5E-34 T 14-10-2018 C4901_00415 2b22d72a419857033140d8624c3a757a 437 SUPERFAMILY SSF50249 67 144 3.39E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_00415 2b22d72a419857033140d8624c3a757a 437 SMART SM00382 189 375 2.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_00415 2b22d72a419857033140d8624c3a757a 437 SUPERFAMILY SSF52540 109 390 2.19E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00415 2b22d72a419857033140d8624c3a757a 437 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 437 233.529 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 C4901_00415 2b22d72a419857033140d8624c3a757a 437 TIGRFAM TIGR00767 rho: transcription termination factor Rho 46 436 1.2E-209 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 C4901_00415 2b22d72a419857033140d8624c3a757a 437 Gene3D G3DSA:1.10.720.10 1 31 1.1E-10 T 14-10-2018 C4901_00415 2b22d72a419857033140d8624c3a757a 437 Gene3D G3DSA:1.10.720.10 39 66 1.4E-8 T 14-10-2018 C4901_00415 2b22d72a419857033140d8624c3a757a 437 SUPERFAMILY SSF68912 1 30 1.73E-5 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily C4901_00415 2b22d72a419857033140d8624c3a757a 437 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 179 382 6.2E-25 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_07875 86c6e4ad3868eda26a36b1c9dfbe9761 225 Gene3D G3DSA:1.20.1440.100 15 88 2.2E-68 T 14-10-2018 C4901_07875 86c6e4ad3868eda26a36b1c9dfbe9761 225 SUPERFAMILY SSF56784 3 207 2.17E-31 T 14-10-2018 IPR036412 HAD-like superfamily C4901_07875 86c6e4ad3868eda26a36b1c9dfbe9761 225 Gene3D G3DSA:3.40.50.1000 3 214 2.2E-68 T 14-10-2018 IPR023214 HAD superfamily C4901_07875 86c6e4ad3868eda26a36b1c9dfbe9761 225 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 190 2.2E-22 T 14-10-2018 C4901_07875 86c6e4ad3868eda26a36b1c9dfbe9761 225 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 200 5.5E-39 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like C4901_07875 86c6e4ad3868eda26a36b1c9dfbe9761 225 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 188 2.8E-38 T 14-10-2018 C4901_15745 da644137a63a6568c43dc1a2e45c4df7 143 Gene3D G3DSA:3.40.50.1010 1 139 4.2E-8 T 14-10-2018 C4901_15745 da644137a63a6568c43dc1a2e45c4df7 143 SUPERFAMILY SSF88723 1 139 2.41E-19 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_15745 da644137a63a6568c43dc1a2e45c4df7 143 TIGRFAM TIGR00028 Mtu_PIN_fam: toxin-antitoxin system PIN domain toxin 1 142 1.8E-43 T 14-10-2018 IPR006226 PIN domain toxin GO:0016788 C4901_15745 da644137a63a6568c43dc1a2e45c4df7 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 139 15.563 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_15745 da644137a63a6568c43dc1a2e45c4df7 143 Pfam PF01850 PIN domain 2 134 3.7E-10 T 14-10-2018 IPR002716 PIN domain C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 12 330 36.318 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 SUPERFAMILY SSF51735 14 188 1.8E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 PIRSF PIRSF000114 8 340 1.8E-94 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 188 328 1.0E-49 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 SUPERFAMILY SSF48179 187 339 9.18E-55 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 15 168 3.2E-40 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 196 217 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 Gene3D G3DSA:3.40.50.720 7 195 7.6E-51 T 14-10-2018 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 141 161 1.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 16 33 1.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 181 205 1.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 206 230 1.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 246 263 1.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 66 93 1.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_00845 cbb0b01ad68acc9ec747399727d0b29b 345 Gene3D G3DSA:1.10.1040.10 197 344 2.2E-49 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C4901_08415 be258ea0054250812dc8b2c312e711d5 139 SUPERFAMILY SSF54637 18 135 2.99E-35 T 14-10-2018 IPR029069 HotDog domain superfamily C4901_08415 be258ea0054250812dc8b2c312e711d5 139 Gene3D G3DSA:3.10.129.10 14 139 1.8E-38 T 14-10-2018 C4901_08415 be258ea0054250812dc8b2c312e711d5 139 Pfam PF03061 Thioesterase superfamily 31 101 1.2E-16 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C4901_04630 94d2802248f5f0e7095bdb41c878e87b 231 Pfam PF01292 Prokaryotic cytochrome b561 20 193 6.3E-18 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 C4901_04630 94d2802248f5f0e7095bdb41c878e87b 231 Gene3D G3DSA:1.20.950.20 10 182 1.9E-13 T 14-10-2018 C4901_04630 94d2802248f5f0e7095bdb41c878e87b 231 SUPERFAMILY SSF81342 15 199 9.42E-32 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C4901_04205 352e36d65c017a3530b4074229af5408 100 SUPERFAMILY SSF54975 8 96 5.23E-24 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_04205 352e36d65c017a3530b4074229af5408 100 Gene3D G3DSA:3.30.70.100 2 96 5.6E-26 T 14-10-2018 C4901_04205 352e36d65c017a3530b4074229af5408 100 ProSitePatterns PS00150 Acylphosphatase signature 1. 15 25 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_04205 352e36d65c017a3530b4074229af5408 100 ProSitePatterns PS00151 Acylphosphatase signature 2. 39 55 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_04205 352e36d65c017a3530b4074229af5408 100 Pfam PF00708 Acylphosphatase 11 89 7.0E-23 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_04205 352e36d65c017a3530b4074229af5408 100 PRINTS PR00112 Acylphosphatase signature 31 56 1.8E-6 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_04205 352e36d65c017a3530b4074229af5408 100 PRINTS PR00112 Acylphosphatase signature 10 25 1.8E-6 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 C4901_10865 42630355e54eebc3d3c37c0ebe8ef2f5 167 Pfam PF02082 Transcriptional regulator 1 83 1.7E-28 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C4901_10865 42630355e54eebc3d3c37c0ebe8ef2f5 167 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site C4901_10865 42630355e54eebc3d3c37c0ebe8ef2f5 167 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 132 1.2E-62 T 14-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 C4901_10865 42630355e54eebc3d3c37c0ebe8ef2f5 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 130 5.1E-46 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C4901_10865 42630355e54eebc3d3c37c0ebe8ef2f5 167 Gene3D G3DSA:1.10.10.10 1 144 2.2E-52 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_10865 42630355e54eebc3d3c37c0ebe8ef2f5 167 SUPERFAMILY SSF46785 2 133 3.91E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 SUPERFAMILY SSF50249 1 105 4.71E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 585 33.031 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 Gene3D G3DSA:2.40.50.140 1 106 9.8E-29 T 14-10-2018 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 581 5.0E-231 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 559 5.8E-105 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 Pfam PF02938 GAD domain 309 407 9.7E-26 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 SUPERFAMILY SSF55261 290 421 1.35E-38 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 Gene3D G3DSA:3.30.1360.30 273 421 1.0E-189 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 Pfam PF01336 OB-fold nucleic acid binding domain 18 98 3.3E-14 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 SUPERFAMILY SSF55681 110 581 2.03E-104 T 14-10-2018 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 6.9E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 191 203 6.9E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 221 6.9E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 6.9E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_13840 a7549178d0e269c179e54f3009a3aec0 589 Gene3D G3DSA:3.30.930.10 118 582 1.0E-189 T 14-10-2018 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 322 5.2E-56 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 SUPERFAMILY SSF55347 131 323 9.52E-75 T 14-10-2018 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 PIRSF PIRSF000148 4 340 5.8E-129 T 14-10-2018 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 7 337 6.2E-132 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 Gene3D G3DSA:3.30.360.10 130 319 3.2E-143 T 14-10-2018 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 SMART SM00859 6 121 7.1E-45 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 SUPERFAMILY SSF51735 5 159 6.85E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 336 36.607 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 Gene3D G3DSA:3.40.50.720 7 333 3.2E-143 T 14-10-2018 C4901_08455 4dcd47e2715eff3030ed3f5200d61ca1 340 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 119 1.9E-30 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C4901_16380 1ea71680059134a6699f40276e07fdd0 447 Gene3D G3DSA:3.40.190.10 181 435 1.0E-101 T 14-10-2018 C4901_16380 1ea71680059134a6699f40276e07fdd0 447 SUPERFAMILY SSF53850 94 313 7.06E-34 T 14-10-2018 C4901_16380 1ea71680059134a6699f40276e07fdd0 447 Pfam PF13379 NMT1-like family 89 326 1.5E-66 T 14-10-2018 C4901_16380 1ea71680059134a6699f40276e07fdd0 447 Gene3D G3DSA:3.40.190.10 95 430 1.0E-101 T 14-10-2018 C4901_12635 a23a48d76266e8a2cd65661f0df3a787 111 Gene3D G3DSA:3.30.1420.10 1 39 5.9E-10 T 14-10-2018 C4901_12635 a23a48d76266e8a2cd65661f0df3a787 111 PIRSF PIRSF006223 3 109 2.8E-33 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C4901_12635 a23a48d76266e8a2cd65661f0df3a787 111 Pfam PF04358 DsrC like protein 6 107 1.2E-30 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C4901_12635 a23a48d76266e8a2cd65661f0df3a787 111 SUPERFAMILY SSF69721 2 108 1.09E-30 T 14-10-2018 IPR025526 DsrC-like domain superfamily C4901_12635 a23a48d76266e8a2cd65661f0df3a787 111 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 5 106 1.9E-27 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C4901_12635 a23a48d76266e8a2cd65661f0df3a787 111 Gene3D G3DSA:1.10.10.370 40 107 8.6E-22 T 14-10-2018 C4901_00780 7775fed6326bd48990b542125552aab7 245 Gene3D G3DSA:3.40.50.620 14 239 1.8E-46 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_00780 7775fed6326bd48990b542125552aab7 245 Pfam PF01171 PP-loop family 29 197 3.8E-18 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 C4901_00780 7775fed6326bd48990b542125552aab7 245 PIRSF PIRSF004976 7 242 1.2E-53 T 14-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 C4901_00780 7775fed6326bd48990b542125552aab7 245 SUPERFAMILY SSF52402 15 233 2.21E-45 T 14-10-2018 C4901_09660 5edcdaec33e39fb6be12835c2434e09e 145 Pfam PF01797 Transposase IS200 like 15 131 6.1E-37 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_09660 5edcdaec33e39fb6be12835c2434e09e 145 Gene3D G3DSA:3.30.70.1290 2 135 3.2E-40 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_09660 5edcdaec33e39fb6be12835c2434e09e 145 SUPERFAMILY SSF143422 6 131 4.05E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_09660 5edcdaec33e39fb6be12835c2434e09e 145 SMART SM01321 14 134 9.6E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_10195 5edcdaec33e39fb6be12835c2434e09e 145 Pfam PF01797 Transposase IS200 like 15 131 6.1E-37 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_10195 5edcdaec33e39fb6be12835c2434e09e 145 Gene3D G3DSA:3.30.70.1290 2 135 3.2E-40 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_10195 5edcdaec33e39fb6be12835c2434e09e 145 SUPERFAMILY SSF143422 6 131 4.05E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_10195 5edcdaec33e39fb6be12835c2434e09e 145 SMART SM01321 14 134 9.6E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 Pfam PF14849 YidC periplasmic domain 82 354 2.0E-65 T 14-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 364 543 1.4E-69 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 Pfam PF02096 60Kd inner membrane protein 365 543 1.7E-60 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 Gene3D G3DSA:2.70.98.90 77 344 4.5E-65 T 14-10-2018 IPR038221 YidC, periplasmic domain superfamily C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 10 545 22.536 T 14-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 10 363 1.0E-81 T 14-10-2018 IPR028053 Membrane insertase YidC, N-terminal C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR01900 YidC translocation/secretion protein signature 350 366 6.0E-24 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR01900 YidC translocation/secretion protein signature 479 494 6.0E-24 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR01900 YidC translocation/secretion protein signature 498 522 6.0E-24 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 174 194 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 86 107 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 426 449 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 228 246 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 335 355 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 8 29 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 261 276 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 473 495 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_17115 6ba21e922ea6edb50f65c35753accc72 548 PRINTS PR00701 60kDa inner membrane protein signature 509 532 2.1E-71 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 C4901_07830 c9b6bb6d0f596935309375be3f072e6c 218 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 34 201 6.7E-48 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 C4901_07830 c9b6bb6d0f596935309375be3f072e6c 218 SUPERFAMILY SSF52540 34 206 8.77E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07830 c9b6bb6d0f596935309375be3f072e6c 218 Gene3D G3DSA:3.40.50.300 33 216 4.1E-53 T 14-10-2018 C4901_07830 c9b6bb6d0f596935309375be3f072e6c 218 Pfam PF01583 Adenylylsulphate kinase 34 190 1.7E-48 T 14-10-2018 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 Gene3D G3DSA:3.30.1160.10 81 147 1.1E-33 T 14-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 TIGRFAM TIGR00673 cynS: cyanase 6 147 6.7E-55 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 SUPERFAMILY SSF47413 1 77 2.48E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 PRINTS PR01693 Cyanase signature 14 29 5.0E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 PRINTS PR01693 Cyanase signature 83 97 5.0E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 PRINTS PR01693 Cyanase signature 34 51 5.0E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 PRINTS PR01693 Cyanase signature 101 117 5.0E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 PRINTS PR01693 Cyanase signature 132 142 5.0E-28 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 PIRSF PIRSF001263 1 147 3.6E-54 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 Gene3D G3DSA:1.10.260.40 1 79 1.6E-27 T 14-10-2018 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 Hamap MF_00535 Cyanate hydratase [cynS]. 1 147 76.239 T 14-10-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 Pfam PF02560 Cyanate lyase C-terminal domain 79 145 8.9E-35 T 14-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 SUPERFAMILY SSF55234 80 147 7.98E-29 T 14-10-2018 IPR036581 Cyanate lyase, C-terminal domain superfamily GO:0009439 KEGG: 00910+4.2.1.104 C4901_16365 540ca54eb555cbbcdb1ffcdbf1702b46 147 SMART SM01116 75 147 4.1E-46 T 14-10-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00910+4.2.1.104 C4901_14025 ca86cccc17811df5243335885d552c14 453 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 24 435 2.3E-129 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_14025 ca86cccc17811df5243335885d552c14 453 Hamap MF_01465 Protein translocase subunit SecY [secY]. 14 439 29.57 T 14-10-2018 IPR026593 Protein translocase subunit SecY C4901_14025 ca86cccc17811df5243335885d552c14 453 Gene3D G3DSA:1.10.3370.10 16 435 8.3E-158 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_14025 ca86cccc17811df5243335885d552c14 453 PIRSF PIRSF004557 16 446 3.0E-121 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_14025 ca86cccc17811df5243335885d552c14 453 Pfam PF00344 SecY translocase 80 423 1.4E-114 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_14025 ca86cccc17811df5243335885d552c14 453 ProSitePatterns PS00755 Protein secY signature 1. 80 99 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_14025 ca86cccc17811df5243335885d552c14 453 SUPERFAMILY SSF103491 19 430 9.55E-127 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 79 99 2.1E-91 T 14-10-2018 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 278 297 2.1E-91 T 14-10-2018 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 121 144 2.1E-91 T 14-10-2018 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 376 394 2.1E-91 T 14-10-2018 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 321 343 2.1E-91 T 14-10-2018 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 186 209 2.1E-91 T 14-10-2018 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 160 185 2.1E-91 T 14-10-2018 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 27 45 2.1E-91 T 14-10-2018 C4901_14025 ca86cccc17811df5243335885d552c14 453 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 2.1E-91 T 14-10-2018 C4901_12990 2077a47a136f6c8cccedf3059a458436 77 Gene3D G3DSA:3.30.110.40 1 76 3.3E-29 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_12990 2077a47a136f6c8cccedf3059a458436 77 SUPERFAMILY SSF64307 4 75 6.02E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_12990 2077a47a136f6c8cccedf3059a458436 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 8 32 - T 14-10-2018 IPR001455 TusA-like domain C4901_12990 2077a47a136f6c8cccedf3059a458436 77 Pfam PF01206 Sulfurtransferase TusA 6 75 2.7E-24 T 14-10-2018 IPR001455 TusA-like domain C4901_13195 23c90d5e610831f5c6bfcb2854c64ace 117 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_13195 23c90d5e610831f5c6bfcb2854c64ace 117 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 27 7.3E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_13195 23c90d5e610831f5c6bfcb2854c64ace 117 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 25 7.3E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 PIRSF PIRSF002599 1 67 1.8E-25 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 SMART SM00357 3 67 1.0E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 SUPERFAMILY SSF50249 1 66 1.37E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 Gene3D G3DSA:2.40.50.140 1 66 3.7E-30 T 14-10-2018 C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 PRINTS PR00050 Cold shock protein signature 4 19 7.3E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 PRINTS PR00050 Cold shock protein signature 25 34 7.3E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 PRINTS PR00050 Cold shock protein signature 40 58 7.3E-18 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_08290 f9801bfb78b76103e81405ac16a5f749 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.1E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_04545 4ce2ba91dbf2b745a72c2afa27ebbe54 114 Pfam PF03840 Preprotein translocase SecG subunit 4 73 2.5E-24 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C4901_04545 4ce2ba91dbf2b745a72c2afa27ebbe54 114 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 3.8E-29 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C4901_04545 4ce2ba91dbf2b745a72c2afa27ebbe54 114 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 8.1E-38 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C4901_04545 4ce2ba91dbf2b745a72c2afa27ebbe54 114 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 8.1E-38 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C4901_04545 4ce2ba91dbf2b745a72c2afa27ebbe54 114 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 8.1E-38 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C4901_04545 4ce2ba91dbf2b745a72c2afa27ebbe54 114 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 8.1E-38 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 C4901_10975 c1e888672faf14c6d90cf5876b6e5a21 401 Pfam PF10544 T5orf172 domain 265 376 1.2E-10 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding C4901_10975 c1e888672faf14c6d90cf5876b6e5a21 401 SMART SM00974 281 375 1.6E-22 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 9 574 5.6E-222 T 14-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 Pfam PF00005 ABC transporter 353 502 3.2E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 Pfam PF00664 ABC transporter transmembrane region 24 285 1.0E-49 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 Gene3D G3DSA:3.40.50.300 323 575 8.4E-90 T 14-10-2018 C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 SUPERFAMILY SSF90123 10 320 1.57E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 SUPERFAMILY SSF52540 325 573 2.71E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 Gene3D G3DSA:1.20.1560.10 2 322 7.1E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 SMART SM00382 361 548 7.5E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_09560 6e27775291f37fc0837307a23ac6e8dd 575 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_06945 bafb5c57710987e81704a2ff957d702d 1122 Pfam PF13558 Putative exonuclease SbcCD, C subunit 977 1067 1.2E-21 T 14-10-2018 C4901_06945 bafb5c57710987e81704a2ff957d702d 1122 Gene3D G3DSA:3.40.1140.10 16 200 1.5E-7 T 14-10-2018 C4901_06945 bafb5c57710987e81704a2ff957d702d 1122 Pfam PF13555 P-loop containing region of AAA domain 20 80 6.8E-25 T 14-10-2018 C4901_06945 bafb5c57710987e81704a2ff957d702d 1122 SUPERFAMILY SSF52540 19 1117 5.21E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16925 5c49cdc3a4392eaee9213ae9bd60e62b 254 SMART SM00267 63 244 5.5E-18 T 14-10-2018 IPR000160 GGDEF domain C4901_16925 5c49cdc3a4392eaee9213ae9bd60e62b 254 SUPERFAMILY SSF55073 89 244 5.1E-28 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_16925 5c49cdc3a4392eaee9213ae9bd60e62b 254 Gene3D G3DSA:3.30.70.270 84 247 4.5E-33 T 14-10-2018 C4901_16925 5c49cdc3a4392eaee9213ae9bd60e62b 254 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 85 243 9.6E-24 T 14-10-2018 IPR000160 GGDEF domain C4901_16925 5c49cdc3a4392eaee9213ae9bd60e62b 254 Pfam PF00990 Diguanylate cyclase, GGDEF domain 86 240 6.4E-23 T 14-10-2018 IPR000160 GGDEF domain C4901_10815 86978b63933d2a373248ec8ac2554224 254 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 8 220 9.4E-52 T 14-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW C4901_10815 86978b63933d2a373248ec8ac2554224 254 Gene3D G3DSA:1.25.40.10 27 246 2.0E-34 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_10815 86978b63933d2a373248ec8ac2554224 254 SUPERFAMILY SSF48452 34 198 1.82E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_10815 86978b63933d2a373248ec8ac2554224 254 SMART SM00028 66 99 15.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_10815 86978b63933d2a373248ec8ac2554224 254 SMART SM00028 140 169 430.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_10815 86978b63933d2a373248ec8ac2554224 254 SMART SM00028 32 65 14.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_00320 56d1ce42ed77cd6ce2f56608214dd0df 605 Gene3D G3DSA:3.60.20.10 14 195 3.6E-50 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_00320 56d1ce42ed77cd6ce2f56608214dd0df 605 Pfam PF13537 Glutamine amidotransferase domain 55 173 2.0E-38 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain C4901_00320 56d1ce42ed77cd6ce2f56608214dd0df 605 SUPERFAMILY SSF52402 237 585 2.96E-55 T 14-10-2018 C4901_00320 56d1ce42ed77cd6ce2f56608214dd0df 605 Pfam PF00733 Asparagine synthase 241 592 1.1E-72 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 C4901_00320 56d1ce42ed77cd6ce2f56608214dd0df 605 SUPERFAMILY SSF56235 1 234 4.2E-52 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_00320 56d1ce42ed77cd6ce2f56608214dd0df 605 PIRSF PIRSF001589 1 601 1.3E-125 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C4901_00320 56d1ce42ed77cd6ce2f56608214dd0df 605 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 507 1.2E-105 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 SUPERFAMILY SSF89000 387 436 9.42E-11 T 14-10-2018 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 Pfam PF08502 LeuA allosteric (dimerisation) domain 421 544 4.9E-18 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 6 543 3.3E-214 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 SUPERFAMILY SSF110921 457 543 2.75E-20 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 Pfam PF00682 HMGL-like 32 310 1.2E-73 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 SUPERFAMILY SSF51569 21 329 7.14E-95 T 14-10-2018 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 Gene3D G3DSA:3.20.20.70 10 375 2.7E-149 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 Gene3D G3DSA:3.30.160.270 376 546 6.0E-37 T 14-10-2018 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 39 55 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 SMART SM00917 421 548 4.4E-16 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 242 255 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_13925 beceb876f5bdfd7f784bed0fc8f4bb21 574 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 7 549 48.811 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_04320 073bacdd24e905cf90c36abf217b672d 341 Pfam PF00924 Mechanosensitive ion channel 105 321 3.9E-19 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 C4901_04320 073bacdd24e905cf90c36abf217b672d 341 SUPERFAMILY SSF50182 147 225 3.6E-9 T 14-10-2018 IPR010920 LSM domain superfamily C4901_04320 073bacdd24e905cf90c36abf217b672d 341 Gene3D G3DSA:2.30.30.60 186 228 2.9E-6 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 Pfam PF01926 50S ribosome-binding GTPase 175 293 3.9E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 Pfam PF01926 50S ribosome-binding GTPase 5 119 6.5E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 429 1.3E-153 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 SMART SM00382 1 166 0.12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 SMART SM00382 172 315 0.31 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 SUPERFAMILY SSF52540 137 435 7.81E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 2.7E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.7E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 PIRSF PIRSF006485 1 437 7.9E-151 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 Gene3D G3DSA:3.40.50.300 1 160 1.3E-37 T 14-10-2018 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 Gene3D G3DSA:3.30.300.20 349 431 3.2E-18 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 351 429 1.5E-21 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 SUPERFAMILY SSF52540 1 171 6.58E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 173 295 9.8E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 155 1.6E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 Hamap MF_00195 GTPase Der [der]. 2 432 34.737 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 C4901_10785 f5a85de037e19c560e678a7bd82dcb9e 463 Gene3D G3DSA:3.40.50.300 171 344 5.5E-45 T 14-10-2018 C4901_10370 1c6ecc341aa3e9be02291da8d973b288 189 Hamap MF_00052_B Ribonuclease HII [rnhB]. 3 182 35.931 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 C4901_10370 1c6ecc341aa3e9be02291da8d973b288 189 Gene3D G3DSA:3.30.420.10 1 188 1.3E-70 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_10370 1c6ecc341aa3e9be02291da8d973b288 189 Pfam PF01351 Ribonuclease HII 5 181 9.0E-38 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain C4901_10370 1c6ecc341aa3e9be02291da8d973b288 189 SUPERFAMILY SSF53098 2 186 5.01E-65 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 SMART SM00257 405 448 7.4E-10 T 14-10-2018 IPR018392 LysM domain C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 Pfam PF01476 LysM domain 406 448 4.2E-10 T 14-10-2018 IPR018392 LysM domain C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 170 386 2.3E-42 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 Gene3D G3DSA:2.60.40.3500 19 122 4.1E-9 T 14-10-2018 C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 SUPERFAMILY SSF53187 168 388 1.21E-46 T 14-10-2018 C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 Pfam PF11741 AMIN domain 40 121 9.5E-9 T 14-10-2018 IPR021731 AMIN domain C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 SUPERFAMILY SSF54106 404 448 1.96E-9 T 14-10-2018 C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 Gene3D G3DSA:3.10.350.10 403 450 1.5E-12 T 14-10-2018 IPR036779 LysM domain superfamily C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 SMART SM00646 230 387 2.0E-36 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 C4901_10515 7ab0e4548aba8db38766912c2f3345dc 450 Gene3D G3DSA:3.40.630.40 160 390 2.7E-61 T 14-10-2018 C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Pfam PF13188 PAS domain 26 81 0.0039 T 14-10-2018 IPR000014 PAS domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Gene3D G3DSA:3.30.450.20 451 572 3.1E-19 T 14-10-2018 C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Gene3D G3DSA:3.20.20.450 756 1008 3.6E-105 T 14-10-2018 IPR035919 EAL domain superfamily C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 323 447 2.5E-21 T 14-10-2018 IPR000014 PAS domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 449 570 2.1E-14 T 14-10-2018 IPR000014 PAS domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Gene3D G3DSA:3.30.450.20 317 438 5.8E-22 T 14-10-2018 C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SUPERFAMILY SSF55073 579 742 6.67E-48 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Pfam PF13185 GAF domain 160 306 2.8E-18 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SMART SM00052 752 1000 2.3E-129 T 14-10-2018 IPR001633 EAL domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SMART SM00086 523 563 2.8 T 14-10-2018 IPR001610 PAC motif C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SMART SM00086 399 441 0.019 T 14-10-2018 IPR001610 PAC motif C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Pfam PF00990 Diguanylate cyclase, GGDEF domain 574 737 8.7E-47 T 14-10-2018 IPR000160 GGDEF domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SUPERFAMILY SSF55785 313 439 8.9E-23 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SMART SM00091 449 516 3.0E-4 T 14-10-2018 IPR000014 PAS domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SMART SM00091 29 94 11.0 T 14-10-2018 IPR000014 PAS domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SMART SM00091 326 392 3.7E-11 T 14-10-2018 IPR000014 PAS domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SMART SM00065 171 315 0.0022 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Pfam PF00563 EAL domain 760 995 5.2E-76 T 14-10-2018 IPR001633 EAL domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Pfam PF13426 PAS domain 461 562 9.9E-6 T 14-10-2018 IPR000014 PAS domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 570 739 4.5E-43 T 14-10-2018 IPR000160 GGDEF domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SUPERFAMILY SSF55785 460 571 1.22E-17 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Gene3D G3DSA:3.30.450.40 131 316 8.8E-25 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SMART SM00267 563 742 2.1E-63 T 14-10-2018 IPR000160 GGDEF domain C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SUPERFAMILY SSF55781 163 317 1.29E-19 T 14-10-2018 C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Gene3D G3DSA:3.30.70.270 573 755 2.1E-58 T 14-10-2018 C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 SUPERFAMILY SSF141868 757 1008 1.44E-94 T 14-10-2018 IPR035919 EAL domain superfamily C4901_13460 bd619ee3ea07fdd97c80b0fd666d29aa 1012 Pfam PF00989 PAS fold 327 438 1.3E-10 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_16955 2e1fd46d896ce654869fdefb8322c3e7 55 SMART SM00966 4 48 2.6E-4 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_16955 2e1fd46d896ce654869fdefb8322c3e7 55 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 44 3.0E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_16955 2e1fd46d896ce654869fdefb8322c3e7 55 SUPERFAMILY SSF89447 1 43 2.44E-6 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_00290 5c0c4c1603a7fb47352fd713e84c637a 406 SUPERFAMILY SSF53756 35 379 3.14E-45 T 14-10-2018 C4901_00290 5c0c4c1603a7fb47352fd713e84c637a 406 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 107 353 5.4E-18 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_00290 5c0c4c1603a7fb47352fd713e84c637a 406 Gene3D G3DSA:3.40.50.2000 29 201 1.5E-10 T 14-10-2018 C4901_00290 5c0c4c1603a7fb47352fd713e84c637a 406 Gene3D G3DSA:3.40.50.2000 211 381 6.0E-20 T 14-10-2018 C4901_01735 06f13f189dd36186ae548560e28022f2 179 SUPERFAMILY SSF54523 36 134 1.41E-8 T 14-10-2018 C4901_01735 06f13f189dd36186ae548560e28022f2 179 Gene3D G3DSA:3.30.700.10 35 175 1.5E-7 T 14-10-2018 C4901_01735 06f13f189dd36186ae548560e28022f2 179 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 33 53 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 Pfam PF01739 CheR methyltransferase, SAM binding domain 297 487 1.8E-51 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 Pfam PF01339 CheB methylesterase 23 197 1.7E-50 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 Gene3D G3DSA:3.40.50.150 295 493 1.4E-63 T 14-10-2018 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 Pfam PF03705 CheR methyltransferase, all-alpha domain 233 282 4.3E-11 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 PRINTS PR00996 Glutamate methyltransferase family signature 289 301 1.4E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 PRINTS PR00996 Glutamate methyltransferase family signature 365 381 1.4E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 PRINTS PR00996 Glutamate methyltransferase family signature 252 265 1.4E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 PRINTS PR00996 Glutamate methyltransferase family signature 450 473 1.4E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 PRINTS PR00996 Glutamate methyltransferase family signature 431 445 1.4E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 PRINTS PR00996 Glutamate methyltransferase family signature 328 348 1.4E-26 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 SUPERFAMILY SSF52738 18 204 1.1E-52 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 Gene3D G3DSA:3.40.50.180 13 205 1.7E-60 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 SMART SM00138 230 491 7.3E-71 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 SUPERFAMILY SSF53335 296 490 3.06E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_05645 51bee5181b8d071110fecb6ebaa36ab6 548 SUPERFAMILY SSF47757 229 298 2.62E-11 T 14-10-2018 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 SUPERFAMILY SSF50447 233 325 3.77E-18 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 PRINTS PR00315 GTP-binding elongation factor signature 20 33 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 PRINTS PR00315 GTP-binding elongation factor signature 99 109 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 PRINTS PR00315 GTP-binding elongation factor signature 152 161 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 PRINTS PR00315 GTP-binding elongation factor signature 79 87 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 PRINTS PR00315 GTP-binding elongation factor signature 115 126 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 Gene3D G3DSA:3.40.50.300 5 227 6.8E-62 T 14-10-2018 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 Pfam PF00009 Elongation factor Tu GTP binding domain 18 219 1.6E-38 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 Gene3D G3DSA:2.40.30.10 326 431 7.7E-29 T 14-10-2018 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 SUPERFAMILY SSF52540 15 247 1.12E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 19 431 2.9E-151 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 SUPERFAMILY SSF50465 328 431 9.11E-27 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 Gene3D G3DSA:2.40.30.10 234 323 4.1E-22 T 14-10-2018 C4901_15525 d030e702bc9383b50efeb9e16e0f3b66 443 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 72 87 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C4901_09955 664c6d2794c223e8d5c8681b58a95a55 644 SUPERFAMILY SSF52540 75 349 9.69E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_09955 664c6d2794c223e8d5c8681b58a95a55 644 PIRSF PIRSF000549 1 644 2.2E-267 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 C4901_09955 664c6d2794c223e8d5c8681b58a95a55 644 SMART SM00763 19 380 1.3E-192 T 14-10-2018 IPR013153 PrkA AAA domain C4901_09955 664c6d2794c223e8d5c8681b58a95a55 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 2.0E-68 T 14-10-2018 IPR010650 PrkA C-terminal domain C4901_09955 664c6d2794c223e8d5c8681b58a95a55 644 Pfam PF08298 PrkA AAA domain 19 379 2.0E-161 T 14-10-2018 IPR013153 PrkA AAA domain C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 SUPERFAMILY SSF51735 123 279 1.22E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 280 4.4E-65 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 Gene3D G3DSA:3.40.50.10860 8 276 1.4E-98 T 14-10-2018 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 SUPERFAMILY SSF53223 1 122 2.01E-34 T 14-10-2018 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 Gene3D G3DSA:3.40.50.720 6 259 1.4E-98 T 14-10-2018 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 36.022 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 5.0E-81 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 5.0E-81 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 5.0E-81 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 5.0E-81 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 5.0E-81 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 5.0E-81 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 5.0E-81 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 8.8E-32 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_08485 f4657ca89376972e5bb34e901bc5b661 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 C4901_11275 b56050758e19d3d18dd8a3010dc02e1a 67 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 43 2.0E-14 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C4901_11275 b56050758e19d3d18dd8a3010dc02e1a 67 SUPERFAMILY SSF117130 1 54 2.22E-20 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 C4901_11275 b56050758e19d3d18dd8a3010dc02e1a 67 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 62 1.9E-28 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C4901_11275 b56050758e19d3d18dd8a3010dc02e1a 67 Pfam PF02599 Global regulator protein family 1 52 1.4E-26 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C4901_11275 b56050758e19d3d18dd8a3010dc02e1a 67 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 67 17.219 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C4901_11275 b56050758e19d3d18dd8a3010dc02e1a 67 Gene3D G3DSA:3.30.70.1680 1 59 1.6E-28 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 C4901_14850 4efca6c3dad5acec47e3ba138e1722b9 381 Gene3D G3DSA:3.20.20.70 3 266 2.3E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_14850 4efca6c3dad5acec47e3ba138e1722b9 381 Gene3D G3DSA:1.10.238.260 270 374 1.3E-24 T 14-10-2018 C4901_14850 4efca6c3dad5acec47e3ba138e1722b9 381 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 191 204 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_14850 4efca6c3dad5acec47e3ba138e1722b9 381 TIGRFAM TIGR02660 nifV_homocitr: homocitrate synthase 5 367 8.9E-159 T 14-10-2018 IPR013477 Homocitrate synthase NifV-like GO:0046912|GO:0051188 KEGG: 00300+2.3.3.14|KEGG: 00620+2.3.3.14|MetaCyc: PWY-3081|MetaCyc: PWY-7710 C4901_14850 4efca6c3dad5acec47e3ba138e1722b9 381 Pfam PF00682 HMGL-like 5 262 1.0E-83 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C4901_14850 4efca6c3dad5acec47e3ba138e1722b9 381 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_14850 4efca6c3dad5acec47e3ba138e1722b9 381 SUPERFAMILY SSF51569 5 279 9.52E-84 T 14-10-2018 C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 SUPERFAMILY SSF52518 365 566 2.5E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 Gene3D G3DSA:3.40.50.1220 188 343 3.5E-42 T 14-10-2018 C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 Gene3D G3DSA:3.40.50.970 1 178 5.0E-52 T 14-10-2018 C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 200 329 3.1E-24 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 SUPERFAMILY SSF52467 190 361 2.86E-41 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 Gene3D G3DSA:3.40.50.970 357 582 6.4E-52 T 14-10-2018 C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 SUPERFAMILY SSF52518 4 177 1.15E-44 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 389 544 1.6E-24 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 426 445 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 C4901_08775 53d663f8f93a332b7aeca9e6ce8d2885 596 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 6.9E-43 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 C4901_13080 c432d75c0cfda055e830740a12e46d64 312 SUPERFAMILY SSF52172 1 102 4.39E-8 T 14-10-2018 IPR011006 CheY-like superfamily C4901_13080 c432d75c0cfda055e830740a12e46d64 312 Gene3D G3DSA:1.10.8.60 231 310 1.6E-22 T 14-10-2018 C4901_13080 c432d75c0cfda055e830740a12e46d64 312 Pfam PF00158 Sigma-54 interaction domain 61 226 5.1E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_13080 c432d75c0cfda055e830740a12e46d64 312 Gene3D G3DSA:3.40.50.300 52 230 7.3E-63 T 14-10-2018 C4901_13080 c432d75c0cfda055e830740a12e46d64 312 Gene3D G3DSA:3.40.50.2300 1 51 3.2E-7 T 14-10-2018 C4901_13080 c432d75c0cfda055e830740a12e46d64 312 SMART SM00382 80 223 9.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_13080 c432d75c0cfda055e830740a12e46d64 312 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 274 283 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_13080 c432d75c0cfda055e830740a12e46d64 312 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 146 161 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_13080 c432d75c0cfda055e830740a12e46d64 312 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 84 97 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C4901_13080 c432d75c0cfda055e830740a12e46d64 312 SUPERFAMILY SSF52540 60 304 3.16E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 Pfam PF00158 Sigma-54 interaction domain 140 307 3.3E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 Gene3D G3DSA:3.40.50.2300 3 125 2.3E-32 T 14-10-2018 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 7 461 2.2E-214 T 14-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 Pfam PF00072 Response regulator receiver domain 7 111 1.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 Pfam PF02954 Bacterial regulatory protein, Fis family 423 461 5.4E-15 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 SMART SM00448 5 116 2.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 SUPERFAMILY SSF46689 388 463 2.39E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 SMART SM00382 160 311 2.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 SUPERFAMILY SSF52172 6 185 1.41E-38 T 14-10-2018 IPR011006 CheY-like superfamily C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 Gene3D G3DSA:1.10.10.60 385 463 5.6E-21 T 14-10-2018 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 SUPERFAMILY SSF52540 140 382 5.33E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 Gene3D G3DSA:3.40.50.300 126 310 3.0E-63 T 14-10-2018 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 427 444 1.8E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 444 463 1.8E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_01610 90ad51993083c8e7afefc7d92570dd22 463 Gene3D G3DSA:1.10.8.60 311 384 1.8E-21 T 14-10-2018 C4901_13070 3d225d157d20e9b9297e6358fd6fe0e5 178 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 12 177 15.314 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 C4901_13070 3d225d157d20e9b9297e6358fd6fe0e5 178 SUPERFAMILY SSF55144 13 177 2.96E-29 T 14-10-2018 IPR009097 Cyclic phosphodiesterase C4901_13070 3d225d157d20e9b9297e6358fd6fe0e5 178 Pfam PF13563 2'-5' RNA ligase superfamily 38 154 2.9E-8 T 14-10-2018 C4901_13070 3d225d157d20e9b9297e6358fd6fe0e5 178 Gene3D G3DSA:3.90.1140.10 8 177 2.0E-32 T 14-10-2018 C4901_13070 3d225d157d20e9b9297e6358fd6fe0e5 178 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 13 177 9.7E-19 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 C4901_15075 7918958acccc4a02cabeacc9d59ef838 345 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 23 345 2.2E-94 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_15075 7918958acccc4a02cabeacc9d59ef838 345 Gene3D G3DSA:3.20.20.70 21 345 2.3E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_15075 7918958acccc4a02cabeacc9d59ef838 345 SUPERFAMILY SSF102114 22 293 9.94E-63 T 14-10-2018 C4901_15075 7918958acccc4a02cabeacc9d59ef838 345 Pfam PF04055 Radical SAM superfamily 36 192 1.3E-24 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_15075 7918958acccc4a02cabeacc9d59ef838 345 Pfam PF06463 Molybdenum Cofactor Synthesis C 199 327 4.0E-32 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_15075 7918958acccc4a02cabeacc9d59ef838 345 SMART SM00729 32 234 2.5E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_16285 0247a163b399ffd8f53eb1e698f3e152 357 Gene3D G3DSA:1.20.1090.10 171 355 2.4E-65 T 14-10-2018 C4901_16285 0247a163b399ffd8f53eb1e698f3e152 357 SUPERFAMILY SSF56796 12 350 3.79E-112 T 14-10-2018 C4901_16285 0247a163b399ffd8f53eb1e698f3e152 357 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 353 68.978 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C4901_16285 0247a163b399ffd8f53eb1e698f3e152 357 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 350 5.7E-114 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C4901_16285 0247a163b399ffd8f53eb1e698f3e152 357 Gene3D G3DSA:3.40.50.1970 1 170 8.8E-62 T 14-10-2018 C4901_16285 0247a163b399ffd8f53eb1e698f3e152 357 Pfam PF01761 3-dehydroquinate synthase 65 322 7.2E-106 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C4901_16285 0247a163b399ffd8f53eb1e698f3e152 357 PIRSF PIRSF001455 13 355 7.2E-105 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 C4901_01000 da151b3cad01b4b28f0d01fdf3695beb 254 SMART SM00382 35 215 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01000 da151b3cad01b4b28f0d01fdf3695beb 254 SUPERFAMILY SSF52540 8 233 1.11E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01000 da151b3cad01b4b28f0d01fdf3695beb 254 Gene3D G3DSA:3.40.50.300 6 252 1.7E-60 T 14-10-2018 C4901_01000 da151b3cad01b4b28f0d01fdf3695beb 254 Pfam PF00005 ABC transporter 27 165 2.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_04855 33a5103cc96ae52d2f43b44157129721 450 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 SUPERFAMILY SSF52540 142 380 1.13E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04855 33a5103cc96ae52d2f43b44157129721 450 SUPERFAMILY SSF46689 355 445 1.03E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 Pfam PF00072 Response regulator receiver domain 4 114 1.6E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 Gene3D G3DSA:3.40.50.2300 2 143 6.4E-33 T 14-10-2018 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 SMART SM00382 162 306 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_04855 33a5103cc96ae52d2f43b44157129721 450 Gene3D G3DSA:1.10.10.60 402 445 1.9E-10 T 14-10-2018 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 Pfam PF02954 Bacterial regulatory protein, Fis family 406 444 7.2E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 413 430 9.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 430 450 9.8E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 Gene3D G3DSA:1.10.8.60 315 390 6.1E-23 T 14-10-2018 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 Gene3D G3DSA:3.40.50.300 144 313 8.2E-59 T 14-10-2018 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 Pfam PF00158 Sigma-54 interaction domain 143 308 3.0E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_04855 33a5103cc96ae52d2f43b44157129721 450 SUPERFAMILY SSF52172 3 187 1.18E-37 T 14-10-2018 IPR011006 CheY-like superfamily C4901_04855 33a5103cc96ae52d2f43b44157129721 450 SMART SM00448 2 114 7.0E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_08865 05f31b5ab44ffa2485e1bc3a88dee998 208 Gene3D G3DSA:3.40.50.300 6 206 1.1E-60 T 14-10-2018 C4901_08865 05f31b5ab44ffa2485e1bc3a88dee998 208 Pfam PF02223 Thymidylate kinase 14 198 4.3E-51 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 C4901_08865 05f31b5ab44ffa2485e1bc3a88dee998 208 Hamap MF_00165 Thymidylate kinase [tmk]. 10 208 28.415 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 C4901_08865 05f31b5ab44ffa2485e1bc3a88dee998 208 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 10 199 1.6E-46 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 C4901_08865 05f31b5ab44ffa2485e1bc3a88dee998 208 SUPERFAMILY SSF52540 8 196 1.69E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14475 f24a85323f53340a0025c95537f73720 337 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 328 2.4E-131 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 4.0E-64 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 106 5.1E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 Gene3D G3DSA:3.40.50.720 4 328 1.0E-151 T 14-10-2018 C4901_14475 f24a85323f53340a0025c95537f73720 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 7.3E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 7.3E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 7.3E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 7.3E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 7.3E-40 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 Gene3D G3DSA:3.30.360.10 154 318 1.0E-151 T 14-10-2018 C4901_14475 f24a85323f53340a0025c95537f73720 337 PIRSF PIRSF000149 1 337 1.4E-139 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 SUPERFAMILY SSF55347 155 317 8.93E-70 T 14-10-2018 C4901_14475 f24a85323f53340a0025c95537f73720 337 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14475 f24a85323f53340a0025c95537f73720 337 SUPERFAMILY SSF51735 1 183 3.68E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_14475 f24a85323f53340a0025c95537f73720 337 SMART SM00846 3 155 2.6E-99 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_11800 1158404d64cae7451f645f38e11e7f2f 241 Gene3D G3DSA:2.160.10.10 80 232 2.6E-38 T 14-10-2018 C4901_11800 1158404d64cae7451f645f38e11e7f2f 241 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 176 208 2.3E-7 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_11800 1158404d64cae7451f645f38e11e7f2f 241 SUPERFAMILY SSF51161 99 226 6.79E-33 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_00770 47493cb78574dae225ec8e3163611a7c 437 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 198 357 4.1E-81 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 Gene3D G3DSA:3.40.50.1480 149 204 1.6E-21 T 14-10-2018 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 Gene3D G3DSA:3.40.50.1480 1 148 1.8E-69 T 14-10-2018 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 SUPERFAMILY SSF51735 198 357 1.09E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_00770 47493cb78574dae225ec8e3163611a7c 437 SUPERFAMILY SSF52283 11 437 1.08E-115 T 14-10-2018 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 SMART SM00996 12 436 0.0 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 Gene3D G3DSA:3.40.50.720 205 352 1.1E-75 T 14-10-2018 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 Gene3D G3DSA:3.40.50.1480 353 437 1.2E-38 T 14-10-2018 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 PIRSF PIRSF001109 1 437 2.6E-193 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 12 148 2.6E-70 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 SMART SM00997 198 357 1.5E-113 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 8 429 48.541 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 13 429 1.3E-191 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 ProSitePatterns PS00739 S-adenosyl-L-homocysteine hydrolase signature 2. 220 236 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C4901_00770 47493cb78574dae225ec8e3163611a7c 437 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 84 98 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 C4901_06825 e29abe8b8b1f52943e74f3c962d1f2fd 477 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 2 440 36.711 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 C4901_06825 e29abe8b8b1f52943e74f3c962d1f2fd 477 Gene3D G3DSA:3.40.50.300 4 190 2.7E-19 T 14-10-2018 C4901_06825 e29abe8b8b1f52943e74f3c962d1f2fd 477 SUPERFAMILY SSF52317 243 451 6.81E-31 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_06825 e29abe8b8b1f52943e74f3c962d1f2fd 477 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 14 187 5.3E-12 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C4901_06825 e29abe8b8b1f52943e74f3c962d1f2fd 477 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 245 434 8.6E-36 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 C4901_06825 e29abe8b8b1f52943e74f3c962d1f2fd 477 Gene3D G3DSA:3.40.50.880 244 423 4.1E-10 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_06825 e29abe8b8b1f52943e74f3c962d1f2fd 477 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 11 439 5.2E-122 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 C4901_06825 e29abe8b8b1f52943e74f3c962d1f2fd 477 SUPERFAMILY SSF52540 1 197 4.81E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04560 ad624343c74de81fd620eabb83f77960 158 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 1 151 42.008 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04560 ad624343c74de81fd620eabb83f77960 158 SUPERFAMILY SSF56770 9 153 5.36E-67 T 14-10-2018 C4901_04560 ad624343c74de81fd620eabb83f77960 158 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 12 152 8.5E-78 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04560 ad624343c74de81fd620eabb83f77960 158 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 145 2.9E-22 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04560 ad624343c74de81fd620eabb83f77960 158 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 118 134 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04560 ad624343c74de81fd620eabb83f77960 158 Gene3D G3DSA:3.40.50.12280 3 158 6.9E-79 T 14-10-2018 C4901_10415 46daae8722a61ea51ec6fea8e85f59bc 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 240 5.0E-76 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C4901_10415 46daae8722a61ea51ec6fea8e85f59bc 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 13 240 3.3E-87 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C4901_10415 46daae8722a61ea51ec6fea8e85f59bc 252 SUPERFAMILY SSF64005 11 235 4.05E-85 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C4901_10415 46daae8722a61ea51ec6fea8e85f59bc 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 241 39.513 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C4901_10415 46daae8722a61ea51ec6fea8e85f59bc 252 Gene3D G3DSA:3.40.1180.10 1 241 2.7E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C4901_10415 46daae8722a61ea51ec6fea8e85f59bc 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 186 203 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 C4901_09440 f1c9883d8fabfc7dafa6d4771ab80457 297 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 32 50 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 C4901_09440 f1c9883d8fabfc7dafa6d4771ab80457 297 Gene3D G3DSA:3.40.50.1100 10 290 4.9E-110 T 14-10-2018 C4901_09440 f1c9883d8fabfc7dafa6d4771ab80457 297 SUPERFAMILY SSF53686 5 291 2.75E-92 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C4901_09440 f1c9883d8fabfc7dafa6d4771ab80457 297 TIGRFAM TIGR01138 cysM: cysteine synthase B 6 294 2.8E-139 T 14-10-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C4901_09440 f1c9883d8fabfc7dafa6d4771ab80457 297 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 294 1.1E-120 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 C4901_09440 f1c9883d8fabfc7dafa6d4771ab80457 297 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 283 4.6E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C4901_09440 f1c9883d8fabfc7dafa6d4771ab80457 297 Gene3D G3DSA:3.40.50.1100 37 142 4.9E-110 T 14-10-2018 C4901_08805 ed7fec34be4ac3527bd5dabfc8c10eec 207 Pfam PF00239 Resolvase, N terminal domain 61 187 4.6E-20 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C4901_08805 ed7fec34be4ac3527bd5dabfc8c10eec 207 Pfam PF13411 MerR HTH family regulatory protein 5 49 3.9E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_08805 ed7fec34be4ac3527bd5dabfc8c10eec 207 SMART SM00857 60 189 1.9E-20 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 C4901_08805 ed7fec34be4ac3527bd5dabfc8c10eec 207 SUPERFAMILY SSF46955 5 50 5.95E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_08805 ed7fec34be4ac3527bd5dabfc8c10eec 207 Gene3D G3DSA:3.40.50.1390 57 158 2.4E-23 T 14-10-2018 C4901_08805 ed7fec34be4ac3527bd5dabfc8c10eec 207 SUPERFAMILY SSF53041 59 189 1.57E-21 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 C4901_08805 ed7fec34be4ac3527bd5dabfc8c10eec 207 Gene3D G3DSA:1.10.1660.10 6 52 1.3E-12 T 14-10-2018 C4901_00590 180910e231ca37a5031b62a0afdd53f3 177 Gene3D G3DSA:3.10.129.10 69 154 1.0E-16 T 14-10-2018 C4901_00590 180910e231ca37a5031b62a0afdd53f3 177 SUPERFAMILY SSF54637 79 146 4.54E-13 T 14-10-2018 IPR029069 HotDog domain superfamily C4901_00590 180910e231ca37a5031b62a0afdd53f3 177 Pfam PF07977 FabA-like domain 86 142 6.7E-6 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00942 Copper-transporting ATPase 1 signature 30 53 2.6E-9 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00942 Copper-transporting ATPase 1 signature 215 240 2.6E-9 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00942 Copper-transporting ATPase 1 signature 4 29 2.6E-9 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Pfam PF00122 E1-E2 ATPase 300 480 1.1E-52 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 SUPERFAMILY SSF81653 303 399 5.23E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Gene3D G3DSA:3.40.1110.10 512 631 3.2E-88 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Gene3D G3DSA:3.30.70.100 2 71 8.8E-24 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 SUPERFAMILY SSF56784 499 805 4.88E-54 T 14-10-2018 IPR036412 HAD-like superfamily C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 ProSitePatterns PS01229 Hypothetical cof family signature 2. 699 721 - T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Gene3D G3DSA:3.40.50.1000 482 750 3.2E-88 T 14-10-2018 IPR023214 HAD superfamily C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 SUPERFAMILY SSF81665 266 771 1.44E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 77 106 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Gene3D G3DSA:3.30.70.100 72 136 1.6E-18 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 214 808 8.9E-175 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 271 775 8.3E-86 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Gene3D G3DSA:2.70.150.20 293 403 3.0E-38 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 624 635 9.7E-27 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 699 718 9.7E-27 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 656 9.7E-27 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 9.7E-27 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 722 734 9.7E-27 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 349 363 9.7E-27 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00943 Copper-transporting ATPase signature 217 236 3.2E-8 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00943 Copper-transporting ATPase signature 422 436 3.2E-8 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00943 Copper-transporting ATPase signature 676 693 3.2E-8 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 PRINTS PR00943 Copper-transporting ATPase signature 269 288 3.2E-8 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 232 807 4.5E-181 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 SUPERFAMILY SSF55008 74 136 1.28E-17 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 713 5.8E-43 T 14-10-2018 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 5 67 6.0E-11 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Pfam PF00403 Heavy-metal-associated domain 75 135 1.3E-14 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 Pfam PF00403 Heavy-metal-associated domain 7 67 1.9E-18 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C4901_09900 9a7f35d85f592cdd0f7dc12093b43dc9 833 SUPERFAMILY SSF55008 4 72 8.38E-23 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C4901_09730 13d14438b813f467a4f79983aa96c573 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 451 1.1E-64 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 C4901_09730 13d14438b813f467a4f79983aa96c573 499 SUPERFAMILY SSF53067 4 255 1.15E-86 T 14-10-2018 C4901_09730 13d14438b813f467a4f79983aa96c573 499 Gene3D G3DSA:3.30.420.40 2 253 1.2E-105 T 14-10-2018 C4901_09730 13d14438b813f467a4f79983aa96c573 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 C4901_09730 13d14438b813f467a4f79983aa96c573 499 Hamap MF_00186 Glycerol kinase [glpK]. 2 498 53.581 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 C4901_09730 13d14438b813f467a4f79983aa96c573 499 SUPERFAMILY SSF53067 255 498 4.75E-81 T 14-10-2018 C4901_09730 13d14438b813f467a4f79983aa96c573 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 252 3.9E-72 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 C4901_09730 13d14438b813f467a4f79983aa96c573 499 PIRSF PIRSF000538 2 499 1.4E-167 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 C4901_09730 13d14438b813f467a4f79983aa96c573 499 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 497 2.9E-221 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 C4901_09730 13d14438b813f467a4f79983aa96c573 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 C4901_09730 13d14438b813f467a4f79983aa96c573 499 Gene3D G3DSA:3.30.420.40 254 499 6.4E-90 T 14-10-2018 C4901_00215 2e508eae83f668a049ed6d9c36099eb6 218 SUPERFAMILY SSF56784 3 214 2.67E-35 T 14-10-2018 IPR036412 HAD-like superfamily C4901_00215 2e508eae83f668a049ed6d9c36099eb6 218 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 186 2.0E-9 T 14-10-2018 C4901_00215 2e508eae83f668a049ed6d9c36099eb6 218 Gene3D G3DSA:3.40.50.1000 7 195 2.2E-21 T 14-10-2018 IPR023214 HAD superfamily C4901_13150 f6931f4548f9b40ed8c4a9d674b47291 260 Gene3D G3DSA:3.30.300.160 2 79 1.7E-16 T 14-10-2018 C4901_13150 f6931f4548f9b40ed8c4a9d674b47291 260 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 10 82 2.5E-11 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal C4901_13150 f6931f4548f9b40ed8c4a9d674b47291 260 SUPERFAMILY SSF160246 6 79 9.15E-14 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C4901_13150 f6931f4548f9b40ed8c4a9d674b47291 260 Pfam PF00437 Type II/IV secretion system protein 125 220 2.4E-15 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_13150 f6931f4548f9b40ed8c4a9d674b47291 260 SUPERFAMILY SSF52540 106 223 2.3E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13150 f6931f4548f9b40ed8c4a9d674b47291 260 Gene3D G3DSA:3.30.450.90 88 219 1.4E-42 T 14-10-2018 C4901_01070 a117c46821b353c342911a49d5e93859 388 PIRSF PIRSF000390 6 388 3.0E-117 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C4901_01070 a117c46821b353c342911a49d5e93859 388 Gene3D G3DSA:3.90.1150.10 258 387 3.5E-36 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_01070 a117c46821b353c342911a49d5e93859 388 Gene3D G3DSA:3.40.640.10 2 256 4.5E-97 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_01070 a117c46821b353c342911a49d5e93859 388 SUPERFAMILY SSF53383 8 385 1.06E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_01070 a117c46821b353c342911a49d5e93859 388 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 381 1.9E-126 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 Gene3D G3DSA:3.40.50.300 3 279 7.6E-60 T 14-10-2018 C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 Gene3D G3DSA:3.40.50.300 282 529 1.3E-60 T 14-10-2018 C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 Pfam PF00005 ABC transporter 336 469 4.3E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 Gene3D G3DSA:1.10.287.380 550 627 7.9E-22 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 SMART SM00382 344 515 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 SMART SM00382 28 231 5.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 SUPERFAMILY SSF52540 325 515 3.6E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 Pfam PF12848 ABC transporter 224 296 1.3E-7 T 14-10-2018 IPR032781 ABC-transporter extension domain C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 SUPERFAMILY SSF52540 3 245 9.49E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 Pfam PF00005 ABC transporter 19 185 6.7E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_07220 18bd6ec5b9b00a9ebeb74e7379092463 627 Pfam PF16326 ABC transporter C-terminal domain 558 625 7.1E-19 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 C4901_17085 a86b123c3f67a88de3c96212b9f74fa8 204 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 84 174 3.3E-8 T 14-10-2018 IPR031982 Type IV minor pilin ComP C4901_17085 a86b123c3f67a88de3c96212b9f74fa8 204 Gene3D G3DSA:3.30.700.10 64 197 3.2E-20 T 14-10-2018 C4901_17085 a86b123c3f67a88de3c96212b9f74fa8 204 SUPERFAMILY SSF54523 64 192 3.56E-20 T 14-10-2018 C4901_17085 a86b123c3f67a88de3c96212b9f74fa8 204 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 60 83 1.6E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_17085 a86b123c3f67a88de3c96212b9f74fa8 204 Pfam PF07963 Prokaryotic N-terminal methylation motif 59 82 8.4E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_17085 a86b123c3f67a88de3c96212b9f74fa8 204 PRINTS PR00813 Bacterial general secretion pathway protein G signature 98 116 1.8E-8 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C4901_17085 a86b123c3f67a88de3c96212b9f74fa8 204 PRINTS PR00813 Bacterial general secretion pathway protein G signature 62 87 1.8E-8 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C4901_17085 a86b123c3f67a88de3c96212b9f74fa8 204 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 61 81 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_03220 232ddb1453a295115fbe064b85eb2827 208 SUPERFAMILY SSF52833 11 110 1.98E-27 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_03220 232ddb1453a295115fbe064b85eb2827 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 86 2.0E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_03220 232ddb1453a295115fbe064b85eb2827 208 SUPERFAMILY SSF47616 83 207 2.7E-26 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C4901_03220 232ddb1453a295115fbe064b85eb2827 208 Gene3D G3DSA:3.40.30.10 11 200 3.8E-77 T 14-10-2018 C4901_03220 232ddb1453a295115fbe064b85eb2827 208 Pfam PF13410 Glutathione S-transferase, C-terminal domain 126 184 9.2E-10 T 14-10-2018 C4901_03220 232ddb1453a295115fbe064b85eb2827 208 Gene3D G3DSA:1.20.1050.10 89 192 3.8E-77 T 14-10-2018 C4901_04180 6c7daec16ea009934eb8d3c00fc9d66d 330 Gene3D G3DSA:3.30.930.10 11 330 3.1E-77 T 14-10-2018 C4901_04180 6c7daec16ea009934eb8d3c00fc9d66d 330 PRINTS PR00982 Lysyl-tRNA synthetase signature 85 98 2.1E-11 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_04180 6c7daec16ea009934eb8d3c00fc9d66d 330 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 2.1E-11 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_04180 6c7daec16ea009934eb8d3c00fc9d66d 330 PRINTS PR00982 Lysyl-tRNA synthetase signature 103 120 2.1E-11 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_04180 6c7daec16ea009934eb8d3c00fc9d66d 330 PRINTS PR00982 Lysyl-tRNA synthetase signature 40 50 2.1E-11 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 C4901_04180 6c7daec16ea009934eb8d3c00fc9d66d 330 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 26 325 2.0E-99 T 14-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 C4901_04180 6c7daec16ea009934eb8d3c00fc9d66d 330 Pfam PF00152 tRNA synthetases class II (D, K and N) 24 327 3.6E-30 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_04180 6c7daec16ea009934eb8d3c00fc9d66d 330 SUPERFAMILY SSF55681 22 327 2.39E-57 T 14-10-2018 C4901_08855 7656346d0b6a7569ff0ebf620d6c08db 272 Gene3D G3DSA:3.20.10.10 111 266 4.7E-47 T 14-10-2018 C4901_08855 7656346d0b6a7569ff0ebf620d6c08db 272 Gene3D G3DSA:3.30.470.10 6 108 2.8E-22 T 14-10-2018 C4901_08855 7656346d0b6a7569ff0ebf620d6c08db 272 SUPERFAMILY SSF56752 19 257 1.96E-54 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 C4901_08855 7656346d0b6a7569ff0ebf620d6c08db 272 ProSitePatterns PS00770 Aminotransferases class-IV signature. 171 200 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 C4901_08855 7656346d0b6a7569ff0ebf620d6c08db 272 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 7 260 1.4E-71 T 14-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 C4901_08855 7656346d0b6a7569ff0ebf620d6c08db 272 Pfam PF01063 Amino-transferase class IV 27 242 8.4E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 C4901_09540 1aad65e913b4850ffed96a3af4a0a9c8 243 Pfam PF02348 Cytidylyltransferase 3 211 6.0E-49 T 14-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 C4901_09540 1aad65e913b4850ffed96a3af4a0a9c8 243 Gene3D G3DSA:3.90.550.10 1 240 1.3E-82 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_09540 1aad65e913b4850ffed96a3af4a0a9c8 243 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 241 38.846 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 C4901_09540 1aad65e913b4850ffed96a3af4a0a9c8 243 SUPERFAMILY SSF53448 2 240 4.46E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_09540 1aad65e913b4850ffed96a3af4a0a9c8 243 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 2 233 2.3E-75 T 14-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 C4901_01280 9ad87509ae6d15f43a0fd90558ec3aef 666 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 121 654 7.4E-134 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 C4901_01280 9ad87509ae6d15f43a0fd90558ec3aef 666 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 122 654 1.2E-165 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 C4901_01280 9ad87509ae6d15f43a0fd90558ec3aef 666 SUPERFAMILY SSF51998 122 655 2.78E-151 T 14-10-2018 C4901_01280 9ad87509ae6d15f43a0fd90558ec3aef 666 Pfam PF03477 ATP cone domain 9 92 4.9E-17 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C4901_01280 9ad87509ae6d15f43a0fd90558ec3aef 666 Gene3D G3DSA:3.20.70.20 134 662 1.6E-102 T 14-10-2018 C4901_11530 c4af80cec74cc2859126fd293cbe7ed8 520 SUPERFAMILY SSF52540 104 493 1.4E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11530 c4af80cec74cc2859126fd293cbe7ed8 520 Gene3D G3DSA:3.40.50.300 99 480 6.8E-79 T 14-10-2018 C4901_11530 c4af80cec74cc2859126fd293cbe7ed8 520 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 108 480 2.6E-83 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain C4901_11530 c4af80cec74cc2859126fd293cbe7ed8 520 Gene3D G3DSA:1.10.8.80 185 286 6.8E-79 T 14-10-2018 C4901_06570 1433249a8cb9f46914f11da31353d995 1300 Pfam PF13641 Glycosyltransferase like family 2 844 1065 1.0E-17 T 14-10-2018 C4901_06570 1433249a8cb9f46914f11da31353d995 1300 SUPERFAMILY SSF53448 840 1094 6.91E-53 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_06570 1433249a8cb9f46914f11da31353d995 1300 Pfam PF00535 Glycosyl transferase family 2 589 744 1.6E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_06570 1433249a8cb9f46914f11da31353d995 1300 Pfam PF13489 Methyltransferase domain 75 231 2.9E-18 T 14-10-2018 C4901_06570 1433249a8cb9f46914f11da31353d995 1300 SUPERFAMILY SSF53448 586 799 4.59E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_06570 1433249a8cb9f46914f11da31353d995 1300 Gene3D G3DSA:3.90.550.10 550 825 3.5E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_06570 1433249a8cb9f46914f11da31353d995 1300 Gene3D G3DSA:3.90.550.10 837 1078 3.5E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_06570 1433249a8cb9f46914f11da31353d995 1300 Gene3D G3DSA:3.40.50.150 76 282 1.7E-39 T 14-10-2018 C4901_06570 1433249a8cb9f46914f11da31353d995 1300 SUPERFAMILY SSF53335 70 261 1.4E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_05270 07c763737f5955f636f4a474b452ce3e 827 Gene3D G3DSA:3.90.1310.20 64 309 1.1E-73 T 14-10-2018 C4901_05270 07c763737f5955f636f4a474b452ce3e 827 Gene3D G3DSA:3.40.710.10 310 322 1.1E-73 T 14-10-2018 C4901_05270 07c763737f5955f636f4a474b452ce3e 827 Gene3D G3DSA:1.10.3810.10 79 271 1.1E-73 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_05270 07c763737f5955f636f4a474b452ce3e 827 Pfam PF17092 Penicillin-binding protein OB-like domain 340 467 2.9E-13 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_05270 07c763737f5955f636f4a474b452ce3e 827 Pfam PF00912 Transglycosylase 70 247 3.8E-54 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_05270 07c763737f5955f636f4a474b452ce3e 827 SUPERFAMILY SSF56601 229 801 3.38E-105 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C4901_05270 07c763737f5955f636f4a474b452ce3e 827 Pfam PF00905 Penicillin binding protein transpeptidase domain 469 735 1.7E-22 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C4901_05270 07c763737f5955f636f4a474b452ce3e 827 Gene3D G3DSA:3.40.710.10 446 804 3.2E-97 T 14-10-2018 C4901_05270 07c763737f5955f636f4a474b452ce3e 827 SUPERFAMILY SSF53955 56 273 2.42E-63 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C4901_12480 3579fec94dfc3a6721582167bde32a04 147 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 1 138 29.615 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 C4901_12480 3579fec94dfc3a6721582167bde32a04 147 SUPERFAMILY SSF82093 29 133 2.62E-33 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 C4901_12480 3579fec94dfc3a6721582167bde32a04 147 Gene3D G3DSA:2.40.50.140 29 134 3.1E-33 T 14-10-2018 C4901_12480 3579fec94dfc3a6721582167bde32a04 147 Pfam PF03100 CcmE 4 128 2.7E-40 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 C4901_03970 8892c790b5b5d14244aef6e35748da80 431 SMART SM00305 315 360 1.5E-8 T 14-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C4901_03970 8892c790b5b5d14244aef6e35748da80 431 SMART SM00306 110 204 5.1E-6 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C4901_03970 8892c790b5b5d14244aef6e35748da80 431 SUPERFAMILY SSF51294 111 354 3.73E-32 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C4901_03970 8892c790b5b5d14244aef6e35748da80 431 Gene3D G3DSA:2.70.40.10 1 116 5.2E-30 T 14-10-2018 IPR036157 dUTPase-like superfamily C4901_03970 8892c790b5b5d14244aef6e35748da80 431 Gene3D G3DSA:2.70.40.10 351 404 2.1E-14 T 14-10-2018 IPR036157 dUTPase-like superfamily C4901_03970 8892c790b5b5d14244aef6e35748da80 431 Pfam PF00692 dUTPase 334 427 2.6E-4 T 14-10-2018 IPR029054 dUTPase-like C4901_03970 8892c790b5b5d14244aef6e35748da80 431 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 333 355 4.6E-10 T 14-10-2018 IPR030934 Intein C-terminal splicing region C4901_03970 8892c790b5b5d14244aef6e35748da80 431 SUPERFAMILY SSF51283 349 430 4.58E-26 T 14-10-2018 IPR036157 dUTPase-like superfamily C4901_03970 8892c790b5b5d14244aef6e35748da80 431 PRINTS PR00379 Intein signature 171 184 2.2E-10 T 14-10-2018 IPR006142 Intein GO:0016539 C4901_03970 8892c790b5b5d14244aef6e35748da80 431 PRINTS PR00379 Intein signature 331 348 2.2E-10 T 14-10-2018 IPR006142 Intein GO:0016539 C4901_03970 8892c790b5b5d14244aef6e35748da80 431 PRINTS PR00379 Intein signature 349 358 2.2E-10 T 14-10-2018 IPR006142 Intein GO:0016539 C4901_03970 8892c790b5b5d14244aef6e35748da80 431 Pfam PF14890 Intein splicing domain 147 354 5.2E-16 T 14-10-2018 C4901_03970 8892c790b5b5d14244aef6e35748da80 431 SUPERFAMILY SSF51283 1 111 3.01E-21 T 14-10-2018 IPR036157 dUTPase-like superfamily C4901_14450 ce9dbb4dee999258d84ff63b2e13c180 139 PIRSF PIRSF021774 6 137 3.9E-39 T 14-10-2018 IPR016796 Uncharacterised conserved protein UCP021774 C4901_14450 ce9dbb4dee999258d84ff63b2e13c180 139 Gene3D G3DSA:3.30.310.70 9 135 1.1E-41 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_14450 ce9dbb4dee999258d84ff63b2e13c180 139 Pfam PF03625 Domain of unknown function DUF302 41 105 4.1E-27 T 14-10-2018 IPR005180 Domain of unknown function DUF302 C4901_14450 ce9dbb4dee999258d84ff63b2e13c180 139 SUPERFAMILY SSF103247 13 133 1.96E-34 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 Pfam PF02872 5'-nucleotidase, C-terminal domain 305 428 3.6E-16 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 Gene3D G3DSA:3.90.780.10 293 476 3.2E-41 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 Gene3D G3DSA:3.60.21.10 1 290 2.1E-73 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 SUPERFAMILY SSF56300 3 287 4.83E-63 T 14-10-2018 C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 SUPERFAMILY SSF55816 301 476 1.44E-24 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 PRINTS PR01607 Apyrase family signature 182 199 8.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 PRINTS PR01607 Apyrase family signature 2 20 8.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 PRINTS PR01607 Apyrase family signature 201 224 8.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 PRINTS PR01607 Apyrase family signature 341 364 8.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_02710 bbe36ae6d9d6502684136cac7045954a 477 PRINTS PR01607 Apyrase family signature 229 249 8.9E-13 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 SUPERFAMILY SSF81271 279 360 2.18E-35 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 Pfam PF01926 50S ribosome-binding GTPase 5 115 3.1E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 SUPERFAMILY SSF52540 3 298 2.55E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 Pfam PF06071 Protein of unknown function (DUF933) 279 362 4.6E-39 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 Gene3D G3DSA:1.10.150.300 113 200 1.7E-145 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 43.71 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 5.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 5.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 5.4E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 PIRSF PIRSF006641 1 363 9.3E-148 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 Gene3D G3DSA:3.10.20.30 48 361 1.7E-145 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 Gene3D G3DSA:3.40.50.300 3 278 1.7E-145 T 14-10-2018 C4901_02435 82d42ada5ba58dc03031e861f5b1fd8f 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.4E-145 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 C4901_11465 17755d53a65dc12086c10929f9788970 567 Pfam PF01609 Transposase DDE domain 184 463 6.0E-16 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_11465 17755d53a65dc12086c10929f9788970 567 SUPERFAMILY SSF53098 400 470 3.64E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_02715 703640305fcb95f635956962b262cf3f 459 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 150 170 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 C4901_02715 703640305fcb95f635956962b262cf3f 459 Pfam PF01938 TRAM domain 379 440 3.3E-13 T 14-10-2018 IPR002792 TRAM domain C4901_02715 703640305fcb95f635956962b262cf3f 459 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 5 440 3.0E-167 T 14-10-2018 C4901_02715 703640305fcb95f635956962b262cf3f 459 Gene3D G3DSA:3.80.30.20 144 377 1.5E-82 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C4901_02715 703640305fcb95f635956962b262cf3f 459 SUPERFAMILY SSF102114 121 370 8.89E-60 T 14-10-2018 C4901_02715 703640305fcb95f635956962b262cf3f 459 SMART SM00729 146 366 2.4E-56 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_02715 703640305fcb95f635956962b262cf3f 459 Gene3D G3DSA:3.40.50.12160 4 139 1.4E-31 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily C4901_02715 703640305fcb95f635956962b262cf3f 459 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 70.087 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 C4901_02715 703640305fcb95f635956962b262cf3f 459 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 437 6.6E-142 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 C4901_02715 703640305fcb95f635956962b262cf3f 459 Pfam PF00919 Uncharacterized protein family UPF0004 5 104 6.4E-28 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 C4901_02715 703640305fcb95f635956962b262cf3f 459 Pfam PF04055 Radical SAM superfamily 150 324 3.8E-27 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_02315 e930813324ede2b91f52fd1e3757facf 295 SUPERFAMILY SSF47823 8 87 4.32E-12 T 14-10-2018 C4901_02315 e930813324ede2b91f52fd1e3757facf 295 Pfam PF00589 Phage integrase family 113 276 9.8E-44 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_02315 e930813324ede2b91f52fd1e3757facf 295 Gene3D G3DSA:1.10.150.130 6 96 2.8E-12 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_02315 e930813324ede2b91f52fd1e3757facf 295 Gene3D G3DSA:1.10.443.10 109 284 1.5E-54 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_02315 e930813324ede2b91f52fd1e3757facf 295 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 13 88 2.8E-12 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C4901_02315 e930813324ede2b91f52fd1e3757facf 295 SUPERFAMILY SSF56349 105 288 7.36E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_02315 e930813324ede2b91f52fd1e3757facf 295 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 290 52.299 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD C4901_11315 b6a3eb795867839bbb792869dda257c2 141 SUPERFAMILY SSF48013 4 133 7.06E-36 T 14-10-2018 IPR035926 NusB-like superfamily C4901_11315 b6a3eb795867839bbb792869dda257c2 141 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 3 135 20.567 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 C4901_11315 b6a3eb795867839bbb792869dda257c2 141 Pfam PF01029 NusB family 7 132 8.5E-31 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 C4901_11315 b6a3eb795867839bbb792869dda257c2 141 Gene3D G3DSA:1.10.940.10 1 137 1.4E-40 T 14-10-2018 IPR035926 NusB-like superfamily C4901_11315 b6a3eb795867839bbb792869dda257c2 141 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 5 132 3.2E-37 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SUPERFAMILY SSF47384 632 700 1.02E-6 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SUPERFAMILY SSF52172 879 1002 2.28E-26 T 14-10-2018 IPR011006 CheY-like superfamily C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SMART SM01079 247 408 4.1E-8 T 14-10-2018 IPR006189 CHASE domain C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 Pfam PF08448 PAS fold 510 622 7.6E-17 T 14-10-2018 IPR013656 PAS fold-4 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 PRINTS PR00344 Bacterial sensor protein C-terminal signature 808 818 7.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 PRINTS PR00344 Bacterial sensor protein C-terminal signature 819 837 7.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 PRINTS PR00344 Bacterial sensor protein C-terminal signature 790 804 7.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 PRINTS PR00344 Bacterial sensor protein C-terminal signature 843 856 7.2E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 Gene3D G3DSA:1.10.287.130 628 699 3.5E-12 T 14-10-2018 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SMART SM00448 881 997 3.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SUPERFAMILY SSF55874 717 861 3.27E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 Gene3D G3DSA:3.30.565.10 709 860 1.8E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 498 627 8.3E-20 T 14-10-2018 IPR000014 PAS domain C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 Pfam PF03924 CHASE domain 306 389 1.2E-8 T 14-10-2018 IPR006189 CHASE domain C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 Gene3D G3DSA:3.30.450.20 490 627 9.0E-26 T 14-10-2018 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SUPERFAMILY SSF55785 494 619 1.38E-20 T 14-10-2018 IPR035965 PAS domain superfamily C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 742 857 6.6E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SMART SM00387 741 859 1.9E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SMART SM00086 579 621 0.0047 T 14-10-2018 IPR001610 PAC motif C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SMART SM00091 502 571 7.0E-4 T 14-10-2018 IPR000014 PAS domain C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 Pfam PF00072 Response regulator receiver domain 883 997 1.3E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 Gene3D G3DSA:3.40.50.2300 879 1002 3.6E-25 T 14-10-2018 C4901_06970 db645858ad2db8d2202da4dbb843b370 1002 SMART SM00388 636 702 5.3E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 101 594 4.3E-237 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 SMART SM00382 187 326 1.1E-24 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 609 37.036 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 SUPERFAMILY SSF52540 144 394 5.58E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 Gene3D G3DSA:3.40.50.300 139 325 5.5E-72 T 14-10-2018 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 Gene3D G3DSA:2.40.50.920 29 100 5.8E-11 T 14-10-2018 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 Gene3D G3DSA:1.20.58.760 405 601 8.7E-73 T 14-10-2018 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 SUPERFAMILY SSF140990 405 602 1.83E-74 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 ProSitePatterns PS00674 AAA-protein family signature. 294 312 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 Pfam PF01434 Peptidase family M41 385 593 3.2E-78 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 Gene3D G3DSA:1.10.8.60 326 402 7.1E-27 T 14-10-2018 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 191 323 5.0E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_04525 9fe40c396fb44c58ccfb3477bb41fdcc 640 Pfam PF06480 FtsH Extracellular 8 94 6.3E-14 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 Gene3D G3DSA:1.10.10.10 5 107 1.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 SMART SM00450 121 217 5.1E-25 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 Pfam PF12840 Helix-turn-helix domain 16 74 1.6E-12 T 14-10-2018 C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 Gene3D G3DSA:3.40.250.10 108 220 1.6E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 Pfam PF00581 Rhodanese-like domain 122 213 2.8E-13 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 SUPERFAMILY SSF46785 11 118 2.08E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 SMART SM00418 17 95 4.0E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 SUPERFAMILY SSF52821 110 222 6.68E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 2.7E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 34 2.7E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_02205 ba60ce5ef5faee01ec87ce395147b6bb 253 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 2.7E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 Gene3D G3DSA:1.10.10.60 452 507 3.0E-10 T 14-10-2018 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 469 486 1.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 486 506 1.3E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 SUPERFAMILY SSF46689 407 505 7.17E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 SUPERFAMILY SSF52540 195 435 1.13E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 Pfam PF02954 Bacterial regulatory protein, Fis family 466 503 2.2E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 Gene3D G3DSA:3.40.50.300 188 364 5.9E-63 T 14-10-2018 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 Gene3D G3DSA:1.10.8.60 365 441 6.0E-20 T 14-10-2018 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 Pfam PF00158 Sigma-54 interaction domain 194 360 2.2E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 SMART SM00382 214 357 2.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03545 acff3b3bc199d692a5b5288dd4dc1f06 520 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 SMART SM00842 11 178 2.6E-5 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 SUPERFAMILY SSF53067 11 176 5.87E-14 T 14-10-2018 C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 Gene3D G3DSA:3.30.420.40 12 350 4.9E-89 T 14-10-2018 C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 Gene3D G3DSA:3.30.420.40 189 316 4.9E-89 T 14-10-2018 C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 PIRSF PIRSF019169 1 353 1.8E-120 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 Pfam PF11104 Type IV pilus assembly protein PilM; 13 352 1.2E-127 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 9 352 4.0E-114 T 14-10-2018 IPR005883 Type IV pilus assembly protein PilM C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 Gene3D G3DSA:3.30.1490.300 87 146 4.9E-89 T 14-10-2018 C4901_16335 47ddc9d0c7882e1bddb2ad33fda2c8e6 354 SUPERFAMILY SSF53067 191 349 2.19E-24 T 14-10-2018 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 286 312 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 117 130 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 1 327 40.23 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 SUPERFAMILY SSF88659 224 319 1.38E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 Gene3D G3DSA:1.10.10.10 243 318 1.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 PRINTS PR00046 Major sigma-70 factor signature 286 301 1.9E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 PRINTS PR00046 Major sigma-70 factor signature 301 312 1.9E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 PRINTS PR00046 Major sigma-70 factor signature 117 130 1.9E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 PRINTS PR00046 Major sigma-70 factor signature 141 149 1.9E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 PRINTS PR00046 Major sigma-70 factor signature 265 277 1.9E-27 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 46 327 1.8E-138 T 14-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 SUPERFAMILY SSF88659 166 240 1.48E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 89 315 6.3E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 Pfam PF04539 Sigma-70 region 3 173 247 6.6E-17 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 Pfam PF04542 Sigma-70 region 2 93 162 4.8E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 SUPERFAMILY SSF88946 53 163 7.2E-46 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 Pfam PF00140 Sigma-70 factor, region 1.2 55 86 3.7E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 Pfam PF04545 Sigma-70, region 4 261 313 4.4E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 Gene3D G3DSA:1.10.10.10 166 241 1.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_09475 6f5793585fc90283e55b5ab5fb2c0e28 327 Gene3D G3DSA:1.10.601.10 5 162 5.2E-46 T 14-10-2018 C4901_10910 eb25ac293c0a059a0a4489834b0ae1d6 428 Pfam PF00571 CBS domain 280 325 8.2E-4 T 14-10-2018 IPR000644 CBS domain C4901_10910 eb25ac293c0a059a0a4489834b0ae1d6 428 Pfam PF01595 Domain of unknown function DUF21 13 181 1.4E-44 T 14-10-2018 IPR002550 CNNM, transmembrane domain C4901_10910 eb25ac293c0a059a0a4489834b0ae1d6 428 Pfam PF03471 Transporter associated domain 342 416 3.1E-13 T 14-10-2018 IPR005170 Transporter-associated domain C4901_10910 eb25ac293c0a059a0a4489834b0ae1d6 428 Gene3D G3DSA:3.10.580.10 187 337 1.3E-40 T 14-10-2018 C4901_10910 eb25ac293c0a059a0a4489834b0ae1d6 428 SMART SM01091 340 418 2.6E-18 T 14-10-2018 IPR005170 Transporter-associated domain C4901_10910 eb25ac293c0a059a0a4489834b0ae1d6 428 Gene3D G3DSA:3.30.465.10 338 416 1.8E-23 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C4901_10910 eb25ac293c0a059a0a4489834b0ae1d6 428 SUPERFAMILY SSF54631 192 328 2.44E-24 T 14-10-2018 C4901_10910 eb25ac293c0a059a0a4489834b0ae1d6 428 SUPERFAMILY SSF56176 337 424 1.2E-18 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C4901_04155 e493fec81d5e07392734383ea6461c9e 254 Pfam PF04338 Protein of unknown function, DUF481 43 251 6.2E-24 T 14-10-2018 IPR007433 Protein of unknown function DUF481 C4901_05205 e85364fa92747a57a8c21ced1d527de2 216 Pfam PF12952 Domain of unknown function (DUF3841) 26 187 4.6E-13 T 14-10-2018 IPR024211 Protein of unknown function DUF3841 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.3E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 Gene3D G3DSA:3.30.1490.20 131 203 1.5E-152 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 7.2E-38 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 444 1.2E-226 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 SMART SM00878 336 441 2.3E-63 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 SUPERFAMILY SSF56059 83 343 9.19E-67 T 14-10-2018 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 SUPERFAMILY SSF52440 1 113 1.73E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 Gene3D G3DSA:3.40.50.20 1 85 5.3E-33 T 14-10-2018 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 SUPERFAMILY SSF51246 331 444 9.94E-43 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 3.5E-78 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_00530 a377afbd0783bc9232a3c6803ab97bcc 446 Gene3D G3DSA:3.30.470.20 87 432 1.5E-152 T 14-10-2018 C4901_10160 28ce63491336ee6981f77e899d02c0fc 311 Gene3D G3DSA:3.40.50.300 10 286 5.6E-80 T 14-10-2018 C4901_10160 28ce63491336ee6981f77e899d02c0fc 311 Pfam PF01715 IPP transferase 39 281 1.2E-66 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C4901_10160 28ce63491336ee6981f77e899d02c0fc 311 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 6 288 2.4E-76 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C4901_10160 28ce63491336ee6981f77e899d02c0fc 311 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 6 305 26.415 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 C4901_10160 28ce63491336ee6981f77e899d02c0fc 311 SUPERFAMILY SSF52540 6 149 1.8E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10160 28ce63491336ee6981f77e899d02c0fc 311 Gene3D G3DSA:1.10.20.140 113 181 5.6E-80 T 14-10-2018 C4901_05825 3cac66ae83348e87902ce5431f013e64 498 SUPERFAMILY SSF53955 133 282 4.64E-32 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C4901_05825 3cac66ae83348e87902ce5431f013e64 498 Pfam PF01464 Transglycosylase SLT domain 143 242 9.4E-21 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C4901_05825 3cac66ae83348e87902ce5431f013e64 498 SUPERFAMILY SSF54106 436 481 2.75E-10 T 14-10-2018 C4901_05825 3cac66ae83348e87902ce5431f013e64 498 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 153 181 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 C4901_05825 3cac66ae83348e87902ce5431f013e64 498 Gene3D G3DSA:1.10.530.10 132 278 2.5E-22 T 14-10-2018 C4901_05825 3cac66ae83348e87902ce5431f013e64 498 SMART SM00257 363 406 3.0E-12 T 14-10-2018 IPR018392 LysM domain C4901_05825 3cac66ae83348e87902ce5431f013e64 498 SMART SM00257 437 481 2.2E-9 T 14-10-2018 IPR018392 LysM domain C4901_05825 3cac66ae83348e87902ce5431f013e64 498 Pfam PF01476 LysM domain 364 406 6.0E-12 T 14-10-2018 IPR018392 LysM domain C4901_05825 3cac66ae83348e87902ce5431f013e64 498 Pfam PF01476 LysM domain 438 480 5.1E-12 T 14-10-2018 IPR018392 LysM domain C4901_05825 3cac66ae83348e87902ce5431f013e64 498 Gene3D G3DSA:3.10.350.10 427 489 3.8E-14 T 14-10-2018 IPR036779 LysM domain superfamily C4901_05825 3cac66ae83348e87902ce5431f013e64 498 Gene3D G3DSA:3.10.350.10 361 417 7.0E-16 T 14-10-2018 IPR036779 LysM domain superfamily C4901_05825 3cac66ae83348e87902ce5431f013e64 498 SUPERFAMILY SSF54106 362 406 2.88E-11 T 14-10-2018 C4901_13730 36e3dee3c31b501d99de25b54c4b9af5 181 Pfam PF00665 Integrase core domain 21 139 1.5E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_13730 36e3dee3c31b501d99de25b54c4b9af5 181 SUPERFAMILY SSF53098 20 166 1.19E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_01150 614b8550b4d21da849d054f1af1407ac 253 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 4 248 6.8E-72 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 C4901_01150 614b8550b4d21da849d054f1af1407ac 253 Pfam PF00398 Ribosomal RNA adenine dimethylase 5 247 3.4E-50 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm C4901_01150 614b8550b4d21da849d054f1af1407ac 253 SMART SM00650 18 186 6.5E-68 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 C4901_01150 614b8550b4d21da849d054f1af1407ac 253 SUPERFAMILY SSF53335 3 248 1.61E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_01150 614b8550b4d21da849d054f1af1407ac 253 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 2 252 49.427 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 C4901_01150 614b8550b4d21da849d054f1af1407ac 253 Gene3D G3DSA:3.40.50.150 3 188 3.6E-55 T 14-10-2018 C4901_01150 614b8550b4d21da849d054f1af1407ac 253 Gene3D G3DSA:1.10.8.100 190 253 1.5E-22 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 SUPERFAMILY SSF53067 198 377 2.5E-48 T 14-10-2018 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 Gene3D G3DSA:3.30.420.40 13 370 1.1E-123 T 14-10-2018 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 Pfam PF14450 Cell division protein FtsA 11 193 5.5E-13 T 14-10-2018 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 Pfam PF14450 Cell division protein FtsA 207 373 1.8E-24 T 14-10-2018 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 Gene3D G3DSA:3.90.640.10 235 299 1.1E-123 T 14-10-2018 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 208 221 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 PIRSF PIRSF003101 1 414 2.9E-156 T 14-10-2018 IPR020823 Cell division protein FtsA C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 SUPERFAMILY SSF53067 9 197 1.15E-63 T 14-10-2018 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 377 3.7E-152 T 14-10-2018 IPR020823 Cell division protein FtsA C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 SMART SM00842 10 196 3.1E-107 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 Gene3D G3DSA:3.30.420.40 197 351 1.1E-123 T 14-10-2018 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 Gene3D G3DSA:3.30.1490.110 87 169 1.1E-123 T 14-10-2018 C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 414 31.783 T 14-10-2018 IPR020823 Cell division protein FtsA C4901_03425 693dacb07ab9ccdb9fe56347a87aaf78 414 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 4.2E-33 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 Pfam PF00563 EAL domain 606 841 8.5E-69 T 14-10-2018 IPR001633 EAL domain C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 SMART SM00267 418 590 3.7E-55 T 14-10-2018 IPR000160 GGDEF domain C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 SUPERFAMILY SSF55785 310 416 4.71E-28 T 14-10-2018 IPR035965 PAS domain superfamily C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 Gene3D G3DSA:3.30.450.20 291 427 2.3E-36 T 14-10-2018 C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 SMART SM00086 376 418 4.2E-8 T 14-10-2018 IPR001610 PAC motif C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 Gene3D G3DSA:3.20.20.450 604 855 1.4E-95 T 14-10-2018 IPR035919 EAL domain superfamily C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 SUPERFAMILY SSF55073 434 591 3.84E-41 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 301 424 2.3E-24 T 14-10-2018 IPR000014 PAS domain C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 Pfam PF00990 Diguanylate cyclase, GGDEF domain 429 585 5.1E-41 T 14-10-2018 IPR000160 GGDEF domain C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 Pfam PF00989 PAS fold 310 415 3.8E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 Gene3D G3DSA:3.30.70.270 428 603 7.0E-51 T 14-10-2018 C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 SMART SM00091 304 370 1.8E-6 T 14-10-2018 IPR000014 PAS domain C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 SUPERFAMILY SSF141868 605 853 1.31E-84 T 14-10-2018 IPR035919 EAL domain superfamily C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 SMART SM00052 600 846 1.1E-109 T 14-10-2018 IPR001633 EAL domain C4901_14880 562cb3644776495adb6cd4b5b9f5d1ad 855 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 427 588 5.7E-34 T 14-10-2018 IPR000160 GGDEF domain C4901_02690 c3fc2fe38849355c5e5ea857abed9e0d 493 Gene3D G3DSA:1.10.45.10 426 466 8.6E-10 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 C4901_02690 c3fc2fe38849355c5e5ea857abed9e0d 493 Gene3D G3DSA:3.30.70.2740 345 425 5.3E-7 T 14-10-2018 C4901_02690 c3fc2fe38849355c5e5ea857abed9e0d 493 Gene3D G3DSA:3.30.465.40 13 246 2.3E-60 T 14-10-2018 C4901_02690 c3fc2fe38849355c5e5ea857abed9e0d 493 SUPERFAMILY SSF56176 15 225 7.94E-64 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C4901_02690 c3fc2fe38849355c5e5ea857abed9e0d 493 SUPERFAMILY SSF55103 228 472 4.74E-64 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C4901_02690 c3fc2fe38849355c5e5ea857abed9e0d 493 Pfam PF02913 FAD linked oxidases, C-terminal domain 225 464 6.7E-59 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C4901_02690 c3fc2fe38849355c5e5ea857abed9e0d 493 Pfam PF01565 FAD binding domain 51 189 4.8E-37 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 SUPERFAMILY SSF82714 183 265 3.53E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Pfam PF00873 AcrB/AcrD/AcrF family 6 1012 1.7E-279 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 544 561 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 6.4E-68 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Gene3D G3DSA:1.20.1640.10 505 1010 3.8E-270 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Gene3D G3DSA:3.30.70.1440 656 852 3.8E-270 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 SUPERFAMILY SSF82693 557 655 7.32E-12 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 SUPERFAMILY SSF82866 797 1018 9.55E-46 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 SUPERFAMILY SSF82866 291 491 3.53E-46 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Gene3D G3DSA:3.30.2090.10 179 269 3.8E-270 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 SUPERFAMILY SSF82693 40 130 1.88E-12 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 SUPERFAMILY SSF82693 138 324 2.2E-18 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Gene3D G3DSA:1.20.1640.10 10 504 3.8E-270 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Gene3D G3DSA:3.30.70.1430 559 655 3.8E-270 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Gene3D G3DSA:3.30.70.1430 40 802 3.8E-270 T 14-10-2018 C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Gene3D G3DSA:3.30.2090.10 707 794 3.8E-270 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 SUPERFAMILY SSF82714 708 791 3.01E-13 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_07895 ed70917039373223f201b4eaa3abc7ba 1033 Gene3D G3DSA:3.30.70.1320 135 326 3.8E-270 T 14-10-2018 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 Gene3D G3DSA:3.30.413.10 149 387 1.4E-107 T 14-10-2018 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 151 370 1.6E-31 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 141 2.1E-7 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 Gene3D G3DSA:3.30.70.20 223 301 1.4E-107 T 14-10-2018 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 SUPERFAMILY SSF56014 151 392 2.36E-50 T 14-10-2018 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 SUPERFAMILY SSF54862 212 291 4.37E-14 T 14-10-2018 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 SUPERFAMILY SSF55124 1 151 8.14E-62 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 TIGRFAM TIGR02064 dsrA: sulfite reductase, dissimilatory-type alpha subunit 2 394 3.2E-170 T 14-10-2018 IPR011806 Sulphite reductase, dissimilatory-type alpha subunit GO:0018551|GO:0020037|GO:0051539|GO:0055114 C4901_06765 0f6361b326a8c012359555ad6f44f03d 414 Gene3D G3DSA:3.30.70.2500 50 148 3.2E-43 T 14-10-2018 C4901_00715 9c673cd27efd53138fa5e255d726af89 271 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 2.2E-88 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 C4901_00715 9c673cd27efd53138fa5e255d726af89 271 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 269 44.589 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 C4901_00715 9c673cd27efd53138fa5e255d726af89 271 SUPERFAMILY SSF56300 1 257 1.11E-49 T 14-10-2018 C4901_00715 9c673cd27efd53138fa5e255d726af89 271 Gene3D G3DSA:3.60.21.10 1 270 2.6E-69 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_00715 9c673cd27efd53138fa5e255d726af89 271 Pfam PF00149 Calcineurin-like phosphoesterase 4 75 5.8E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C4901_00715 9c673cd27efd53138fa5e255d726af89 271 PIRSF PIRSF000903 1 271 4.8E-102 T 14-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 C4901_11440 85f2ca18c53470bc241fbf4b4cf41602 88 Pfam PF01610 Transposase 4 61 3.7E-11 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_07910 fd0770913aea10a7cf186cd369721f97 481 Gene3D G3DSA:1.20.1600.10 59 470 4.1E-113 T 14-10-2018 C4901_07910 fd0770913aea10a7cf186cd369721f97 481 SUPERFAMILY SSF56954 16 470 3.01E-97 T 14-10-2018 C4901_07910 fd0770913aea10a7cf186cd369721f97 481 Pfam PF02321 Outer membrane efflux protein 285 467 5.1E-22 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_07910 fd0770913aea10a7cf186cd369721f97 481 Pfam PF02321 Outer membrane efflux protein 69 259 2.5E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_07910 fd0770913aea10a7cf186cd369721f97 481 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 19 469 2.6E-103 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 C4901_07910 fd0770913aea10a7cf186cd369721f97 481 Gene3D G3DSA:2.20.200.10 106 358 4.1E-113 T 14-10-2018 C4901_07185 be8359d2bde24fb7f55eb4193f92415b 578 SUPERFAMILY SSF52540 76 577 4.49E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07185 be8359d2bde24fb7f55eb4193f92415b 578 Pfam PF13538 UvrD-like helicase C-terminal domain 523 577 6.2E-12 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain C4901_07185 be8359d2bde24fb7f55eb4193f92415b 578 Pfam PF13604 AAA domain 94 276 1.6E-21 T 14-10-2018 C4901_07185 be8359d2bde24fb7f55eb4193f92415b 578 Gene3D G3DSA:3.40.50.300 481 577 3.3E-11 T 14-10-2018 C4901_07185 be8359d2bde24fb7f55eb4193f92415b 578 Gene3D G3DSA:3.40.50.300 52 280 2.9E-32 T 14-10-2018 C4901_08545 eebcd9560e7a394da26deeccbfdf92c2 81 SMART SM00436 1 47 0.0061 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 C4901_08545 eebcd9560e7a394da26deeccbfdf92c2 81 SUPERFAMILY SSF56712 1 45 5.76E-12 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain C4901_08545 eebcd9560e7a394da26deeccbfdf92c2 81 Pfam PF01131 DNA topoisomerase 1 44 1.4E-12 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_08545 eebcd9560e7a394da26deeccbfdf92c2 81 Gene3D G3DSA:1.10.460.10 1 40 1.4E-14 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 C4901_12810 fae42fd60866c897af7199f6957222ed 402 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 10 394 3.6E-185 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C4901_12810 fae42fd60866c897af7199f6957222ed 402 Gene3D G3DSA:3.40.50.1100 57 388 5.9E-183 T 14-10-2018 C4901_12810 fae42fd60866c897af7199f6957222ed 402 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 84 98 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C4901_12810 fae42fd60866c897af7199f6957222ed 402 SUPERFAMILY SSF53686 6 392 4.58E-142 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C4901_12810 fae42fd60866c897af7199f6957222ed 402 PIRSF PIRSF001413 1 400 9.4E-158 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C4901_12810 fae42fd60866c897af7199f6957222ed 402 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 56 382 2.6E-47 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C4901_12810 fae42fd60866c897af7199f6957222ed 402 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 5 395 51.615 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C4901_12810 fae42fd60866c897af7199f6957222ed 402 Gene3D G3DSA:3.40.50.1100 13 209 5.9E-183 T 14-10-2018 C4901_03385 a80405b9e1039d002725e7f2e8a4aacb 358 ProSitePatterns PS01348 MraY family signature 2. 186 197 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03385 a80405b9e1039d002725e7f2e8a4aacb 358 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 36 354 1.9E-116 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03385 a80405b9e1039d002725e7f2e8a4aacb 358 ProSitePatterns PS01347 MraY family signature 1. 64 76 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03385 a80405b9e1039d002725e7f2e8a4aacb 358 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 21 355 23.491 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03385 a80405b9e1039d002725e7f2e8a4aacb 358 Pfam PF00953 Glycosyl transferase family 4 95 281 2.6E-35 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 C4901_03385 a80405b9e1039d002725e7f2e8a4aacb 358 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 64 76 2.9E-5 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_08840 1cf09dd1ff2d9ae8401a577db8042e14 79 Pfam PF00550 Phosphopantetheine attachment site 6 73 6.5E-17 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain C4901_08840 1cf09dd1ff2d9ae8401a577db8042e14 79 Gene3D G3DSA:1.10.1200.10 1 79 1.0E-29 T 14-10-2018 IPR036736 ACP-like superfamily C4901_08840 1cf09dd1ff2d9ae8401a577db8042e14 79 SUPERFAMILY SSF47336 2 76 6.94E-24 T 14-10-2018 IPR036736 ACP-like superfamily C4901_08840 1cf09dd1ff2d9ae8401a577db8042e14 79 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 75 5.3E-36 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C4901_08840 1cf09dd1ff2d9ae8401a577db8042e14 79 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 14-10-2018 IPR006162 Phosphopantetheine attachment site C4901_08840 1cf09dd1ff2d9ae8401a577db8042e14 79 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 2.0E-11 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C4901_08840 1cf09dd1ff2d9ae8401a577db8042e14 79 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.394 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 C4901_01505 8fd8f6c546a3f07c9e3098ee8c48f945 229 SUPERFAMILY SSF53335 17 197 5.98E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_01505 8fd8f6c546a3f07c9e3098ee8c48f945 229 Pfam PF08241 Methyltransferase domain 54 139 2.9E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C4901_01505 8fd8f6c546a3f07c9e3098ee8c48f945 229 Gene3D G3DSA:3.40.50.150 21 199 5.6E-33 T 14-10-2018 C4901_03395 7c7e5547f3c5b258dc8dcf8d00d3499e 382 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 15 381 34.561 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03395 7c7e5547f3c5b258dc8dcf8d00d3499e 382 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03395 7c7e5547f3c5b258dc8dcf8d00d3499e 382 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 17 374 3.2E-120 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_03395 7c7e5547f3c5b258dc8dcf8d00d3499e 382 Pfam PF01098 Cell cycle protein 20 376 1.3E-102 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 28 136 2.0E-50 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 110 134 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 24 146 29.482 T 14-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 Gene3D G3DSA:1.20.120.910 17 146 5.7E-39 T 14-10-2018 C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 SUPERFAMILY SSF109635 11 105 1.31E-33 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 PRINTS PR00618 DksA/TraR zinc finger signature 122 134 4.2E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 PRINTS PR00618 DksA/TraR zinc finger signature 110 121 4.2E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 SUPERFAMILY SSF57716 107 144 6.27E-11 T 14-10-2018 C4901_04715 1ca3c3ebfc4ed7f78b2b92db0e4de29c 146 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 106 136 1.9E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 C4901_00990 98f9d4144ea6ef8213dd5802f2998ca6 447 Pfam PF09084 NMT1/THI5 like 126 264 1.5E-6 T 14-10-2018 IPR015168 SsuA/THI5-like C4901_00990 98f9d4144ea6ef8213dd5802f2998ca6 447 Gene3D G3DSA:3.40.190.10 24 168 1.8E-17 T 14-10-2018 C4901_00990 98f9d4144ea6ef8213dd5802f2998ca6 447 Gene3D G3DSA:3.40.190.10 215 337 9.6E-16 T 14-10-2018 C4901_00990 98f9d4144ea6ef8213dd5802f2998ca6 447 SUPERFAMILY SSF53850 26 318 2.37E-29 T 14-10-2018 C4901_04895 39f8df697c637d2f59b03a55a4e37ff7 211 Pfam PF00589 Phage integrase family 26 199 1.7E-15 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_04895 39f8df697c637d2f59b03a55a4e37ff7 211 Gene3D G3DSA:1.10.443.10 22 203 2.7E-24 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_04895 39f8df697c637d2f59b03a55a4e37ff7 211 SUPERFAMILY SSF56349 13 201 7.95E-34 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_05070 11d303776341b8d53a65d2ea68318bb6 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 32 56 7.2E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 SUPERFAMILY SSF51905 8 446 1.91E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 Pfam PF02910 Fumarate reductase flavoprotein C-term 439 523 6.7E-15 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 SUPERFAMILY SSF56425 236 351 5.08E-42 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.8E-5 T 14-10-2018 C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 353 375 1.8E-5 T 14-10-2018 C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 11 518 1.0E-186 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 Gene3D G3DSA:1.20.58.100 423 539 2.9E-40 T 14-10-2018 C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 SUPERFAMILY SSF46977 423 523 4.97E-31 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 Gene3D G3DSA:3.90.700.10 246 356 9.1E-150 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 Gene3D G3DSA:3.50.50.60 13 402 9.1E-150 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_07060 44c5ee91f8081bcd6ba254a56edfccbe 548 Pfam PF00890 FAD binding domain 13 390 5.5E-94 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_00340 a05d42f306cd79bf11565ab41bb5d189 135 Pfam PF04138 GtrA-like protein 16 134 3.6E-22 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 C4901_16695 cf512e5a35ce11b26feef7afc74d9631 1004 Gene3D G3DSA:1.25.40.20 628 794 6.5E-10 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C4901_16695 cf512e5a35ce11b26feef7afc74d9631 1004 SUPERFAMILY SSF48403 711 762 3.42E-9 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily C4901_16695 cf512e5a35ce11b26feef7afc74d9631 1004 Gene3D G3DSA:3.40.50.300 389 577 3.9E-8 T 14-10-2018 C4901_16695 cf512e5a35ce11b26feef7afc74d9631 1004 SUPERFAMILY SSF52540 138 564 5.1E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16695 cf512e5a35ce11b26feef7afc74d9631 1004 Pfam PF01443 Viral (Superfamily 1) RNA helicase 313 497 6.7E-5 T 14-10-2018 IPR027351 (+) RNA virus helicase core domain GO:0005524 C4901_16910 dc8cd390975b2811d266f7c90caa361b 250 Gene3D G3DSA:3.40.50.450 33 230 4.7E-63 T 14-10-2018 C4901_16910 dc8cd390975b2811d266f7c90caa361b 250 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 56 231 9.9E-47 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG C4901_16910 dc8cd390975b2811d266f7c90caa361b 250 SUPERFAMILY SSF102405 27 228 4.27E-60 T 14-10-2018 C4901_16910 dc8cd390975b2811d266f7c90caa361b 250 Pfam PF03641 Possible lysine decarboxylase 98 227 1.9E-31 T 14-10-2018 IPR031100 LOG family C4901_12775 edd49c154bfd10de3296b0161f28836c 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 2 383 1.1E-133 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C4901_12775 edd49c154bfd10de3296b0161f28836c 393 SUPERFAMILY SSF53383 10 385 3.46E-116 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_12775 edd49c154bfd10de3296b0161f28836c 393 Gene3D G3DSA:3.40.640.10 1 248 9.3E-87 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_12775 edd49c154bfd10de3296b0161f28836c 393 Hamap MF_02056 O-succinylhomoserine sulfhydrylase [metZ]. 3 384 51.859 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 C4901_12775 edd49c154bfd10de3296b0161f28836c 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C4901_12775 edd49c154bfd10de3296b0161f28836c 393 PIRSF PIRSF001434 1 387 2.7E-130 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C4901_12775 edd49c154bfd10de3296b0161f28836c 393 TIGRFAM TIGR01325 O_suc_HS_sulf: O-succinylhomoserine sulfhydrylase 2 383 4.1E-164 T 14-10-2018 IPR006234 O-succinylhomoserine sulfhydrylase GO:0071268 C4901_12775 edd49c154bfd10de3296b0161f28836c 393 Gene3D G3DSA:3.90.1150.10 251 391 1.1E-48 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_01880 189f1ee667fde6e797f4444a191d6c1a 194 Gene3D G3DSA:2.160.10.10 61 193 1.4E-18 T 14-10-2018 C4901_01880 189f1ee667fde6e797f4444a191d6c1a 194 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 142 172 2.1E-7 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_01880 189f1ee667fde6e797f4444a191d6c1a 194 SUPERFAMILY SSF51161 70 190 7.07E-20 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Pfam PF08447 PAS fold 625 687 5.4E-12 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00387 815 932 1.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 816 930 7.3E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Gene3D G3DSA:3.30.565.10 778 934 5.2E-41 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SUPERFAMILY SSF55785 567 693 3.38E-23 T 14-10-2018 IPR035965 PAS domain superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Pfam PF08448 PAS fold 339 445 7.8E-11 T 14-10-2018 IPR013656 PAS fold-4 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Gene3D G3DSA:1.20.1270.60 78 261 3.8E-5 T 14-10-2018 IPR027267 AH/BAR domain superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SUPERFAMILY SSF52172 951 1070 3.84E-23 T 14-10-2018 IPR011006 CheY-like superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Gene3D G3DSA:3.30.450.20 322 454 3.0E-12 T 14-10-2018 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 453 577 3.7E-16 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 578 700 4.5E-13 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 332 451 9.0E-6 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SUPERFAMILY SSF55874 790 929 6.68E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Pfam PF13188 PAS domain 582 615 0.073 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Pfam PF13188 PAS domain 458 517 8.0E-8 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00086 277 317 81.0 T 14-10-2018 IPR001610 PAC motif C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00086 654 695 6.2E-6 T 14-10-2018 IPR001610 PAC motif C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00086 403 445 210.0 T 14-10-2018 IPR001610 PAC motif C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Gene3D G3DSA:3.30.450.20 455 569 4.3E-19 T 14-10-2018 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00091 582 648 6.7E-5 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00091 457 527 3.3E-6 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00091 329 396 0.006 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00091 208 272 110.0 T 14-10-2018 IPR000014 PAS domain C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Gene3D G3DSA:1.10.287.130 702 773 8.6E-14 T 14-10-2018 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SUPERFAMILY SSF55785 314 443 2.26E-11 T 14-10-2018 IPR035965 PAS domain superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Pfam PF00072 Response regulator receiver domain 952 1067 4.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Gene3D G3DSA:3.30.450.20 572 693 6.9E-25 T 14-10-2018 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SMART SM00448 950 1067 3.8E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SUPERFAMILY SSF47384 707 772 8.04E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SUPERFAMILY SSF55785 194 311 9.0E-5 T 14-10-2018 IPR035965 PAS domain superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Gene3D G3DSA:3.40.50.2300 949 1076 8.9E-22 T 14-10-2018 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 SUPERFAMILY SSF55785 442 568 1.61E-19 T 14-10-2018 IPR035965 PAS domain superfamily C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 Pfam PF13596 PAS domain 210 314 3.8E-15 T 14-10-2018 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 PRINTS PR00344 Bacterial sensor protein C-terminal signature 863 877 3.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 PRINTS PR00344 Bacterial sensor protein C-terminal signature 892 910 3.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 PRINTS PR00344 Bacterial sensor protein C-terminal signature 881 891 3.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05640 ab0389446e3ecad3ef9c421908b97f60 1083 PRINTS PR00344 Bacterial sensor protein C-terminal signature 916 929 3.4E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_16915 0b75a9aa0173fa3fc76b4c072d9e3941 321 TIGRFAM TIGR00938 thrB_alt: homoserine kinase 1 304 2.4E-112 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 C4901_16915 0b75a9aa0173fa3fc76b4c072d9e3941 321 Gene3D G3DSA:3.30.200.20 1 102 8.1E-35 T 14-10-2018 C4901_16915 0b75a9aa0173fa3fc76b4c072d9e3941 321 Gene3D G3DSA:3.90.1200.10 105 312 8.5E-76 T 14-10-2018 C4901_16915 0b75a9aa0173fa3fc76b4c072d9e3941 321 Hamap MF_00301 Homoserine kinase [thrB]. 1 321 145.131 T 14-10-2018 IPR005280 Homoserine kinase, type II GO:0004413|GO:0009088 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 C4901_16915 0b75a9aa0173fa3fc76b4c072d9e3941 321 Pfam PF01636 Phosphotransferase enzyme family 30 252 2.8E-33 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C4901_16915 0b75a9aa0173fa3fc76b4c072d9e3941 321 SUPERFAMILY SSF56112 6 309 4.13E-72 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_15955 e07053413b3bb516228b96c7dfd277f2 448 Pfam PF13641 Glycosyltransferase like family 2 68 297 4.6E-35 T 14-10-2018 C4901_15955 e07053413b3bb516228b96c7dfd277f2 448 Gene3D G3DSA:3.90.550.10 60 276 7.4E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_15955 e07053413b3bb516228b96c7dfd277f2 448 SUPERFAMILY SSF53448 56 312 1.16E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_09190 689d90e57f30d1e6574d88189738ea4a 1028 SMART SM00487 289 531 8.1E-10 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_09190 689d90e57f30d1e6574d88189738ea4a 1028 Pfam PF04851 Type III restriction enzyme, res subunit 293 442 5.9E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C4901_09190 689d90e57f30d1e6574d88189738ea4a 1028 Gene3D G3DSA:3.90.1570.50 109 183 4.1E-7 T 14-10-2018 C4901_09190 689d90e57f30d1e6574d88189738ea4a 1028 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 94 210 5.0E-14 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 C4901_09190 689d90e57f30d1e6574d88189738ea4a 1028 Gene3D G3DSA:3.40.50.300 531 751 2.6E-17 T 14-10-2018 C4901_09190 689d90e57f30d1e6574d88189738ea4a 1028 Gene3D G3DSA:3.40.50.300 294 454 1.1E-23 T 14-10-2018 C4901_09190 689d90e57f30d1e6574d88189738ea4a 1028 SUPERFAMILY SSF52540 257 549 9.78E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10860 7dd46410fe29075cd2cf7c9306435c9f 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C4901_10860 7dd46410fe29075cd2cf7c9306435c9f 404 PIRSF PIRSF005572 2 384 8.4E-130 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 C4901_10860 7dd46410fe29075cd2cf7c9306435c9f 404 SUPERFAMILY SSF53383 3 391 5.24E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_10860 7dd46410fe29075cd2cf7c9306435c9f 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 54.03 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 C4901_10860 7dd46410fe29075cd2cf7c9306435c9f 404 Gene3D G3DSA:3.90.1150.10 5 374 3.1E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_10860 7dd46410fe29075cd2cf7c9306435c9f 404 Pfam PF00266 Aminotransferase class-V 5 368 8.8E-87 T 14-10-2018 IPR000192 Aminotransferase class V domain C4901_10860 7dd46410fe29075cd2cf7c9306435c9f 404 Gene3D G3DSA:3.40.640.10 16 262 3.1E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_10860 7dd46410fe29075cd2cf7c9306435c9f 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 8.4E-222 T 14-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 76 334 3.6E-28 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 387 616 3.4E-42 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 SUPERFAMILY SSF81660 327 462 7.19E-29 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 Pfam PF00702 haloacid dehalogenase-like hydrolase 312 542 8.5E-32 T 14-10-2018 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 15 689 4.3E-300 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 475 485 3.1E-23 T 14-10-2018 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 528 547 3.1E-23 T 14-10-2018 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 316 330 3.1E-23 T 14-10-2018 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 158 172 3.1E-23 T 14-10-2018 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 563 3.1E-23 T 14-10-2018 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 SUPERFAMILY SSF81665 11 310 4.32E-11 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 SUPERFAMILY SSF56784 304 571 1.06E-35 T 14-10-2018 IPR036412 HAD-like superfamily C4901_13215 6d8bde4912e64686d2114a96bceac460 691 SUPERFAMILY SSF81653 120 211 3.14E-19 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 318 324 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 Gene3D G3DSA:2.70.150.20 107 216 8.1E-23 T 14-10-2018 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 Gene3D G3DSA:3.40.1110.10 327 459 5.5E-42 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 12 691 38.287 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 C4901_13215 6d8bde4912e64686d2114a96bceac460 691 Pfam PF00122 E1-E2 ATPase 120 295 3.1E-32 T 14-10-2018 C4901_11885 3396fcaa8c2189107376370012f65ad5 751 Pfam PF09397 Ftsk gamma domain 685 745 5.1E-27 T 14-10-2018 IPR018541 FtsK gamma domain C4901_11885 3396fcaa8c2189107376370012f65ad5 751 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 18 187 1.4E-38 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region C4901_11885 3396fcaa8c2189107376370012f65ad5 751 Gene3D G3DSA:3.30.980.40 265 369 8.5E-34 T 14-10-2018 C4901_11885 3396fcaa8c2189107376370012f65ad5 751 Gene3D G3DSA:1.10.10.10 679 744 1.2E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_11885 3396fcaa8c2189107376370012f65ad5 751 Gene3D G3DSA:3.40.50.300 370 667 1.0E-112 T 14-10-2018 C4901_11885 3396fcaa8c2189107376370012f65ad5 751 SUPERFAMILY SSF52540 346 652 6.37E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11885 3396fcaa8c2189107376370012f65ad5 751 SMART SM00843 683 748 7.0E-39 T 14-10-2018 IPR018541 FtsK gamma domain C4901_11885 3396fcaa8c2189107376370012f65ad5 751 SUPERFAMILY SSF46785 683 747 2.04E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_11885 3396fcaa8c2189107376370012f65ad5 751 Pfam PF01580 FtsK/SpoIIIE family 372 581 5.4E-64 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 C4901_11885 3396fcaa8c2189107376370012f65ad5 751 SMART SM00382 408 602 5.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_13360 c2a34d5a8d622c94017bd43c0b904a85 233 Gene3D G3DSA:3.40.50.850 20 229 1.1E-54 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C4901_13360 c2a34d5a8d622c94017bd43c0b904a85 233 SUPERFAMILY SSF52499 10 215 3.79E-51 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C4901_13360 c2a34d5a8d622c94017bd43c0b904a85 233 Pfam PF00857 Isochorismatase family 24 214 7.1E-40 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 C4901_13995 a8770acda44e848321d55ccef8236546 131 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_13995 a8770acda44e848321d55ccef8236546 131 SUPERFAMILY SSF64263 1 119 1.31E-46 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_13995 a8770acda44e848321d55ccef8236546 131 Gene3D G3DSA:3.90.1030.10 1 117 9.5E-44 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_13995 a8770acda44e848321d55ccef8236546 131 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 2.3E-41 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_13995 a8770acda44e848321d55ccef8236546 131 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-32 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_13995 a8770acda44e848321d55ccef8236546 131 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 25.32 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05355 219eeba8e30b15814efcbf1bbfa3f3a1 313 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 283 37.757 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C4901_05355 219eeba8e30b15814efcbf1bbfa3f3a1 313 Gene3D G3DSA:3.40.50.11270 12 96 1.7E-109 T 14-10-2018 C4901_05355 219eeba8e30b15814efcbf1bbfa3f3a1 313 Pfam PF02401 LytB protein 3 279 1.7E-89 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C4901_05355 219eeba8e30b15814efcbf1bbfa3f3a1 313 Gene3D G3DSA:3.40.1010.20 97 193 1.7E-109 T 14-10-2018 C4901_05355 219eeba8e30b15814efcbf1bbfa3f3a1 313 Gene3D G3DSA:3.40.1010.20 6 278 1.7E-109 T 14-10-2018 C4901_05355 219eeba8e30b15814efcbf1bbfa3f3a1 313 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 279 5.0E-96 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C4901_14425 d46112f865b98393dd18a23e95952615 132 Gene3D G3DSA:3.30.420.270 59 127 8.2E-8 T 14-10-2018 C4901_14425 d46112f865b98393dd18a23e95952615 132 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 129 3.8E-25 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C4901_09620 52bc04086382ae352337a9b18e24940c 250 Pfam PF13444 Acetyltransferase (GNAT) domain 28 127 2.2E-29 T 14-10-2018 C4901_09620 52bc04086382ae352337a9b18e24940c 250 Gene3D G3DSA:3.40.630.30 12 169 4.2E-26 T 14-10-2018 C4901_09620 52bc04086382ae352337a9b18e24940c 250 SUPERFAMILY SSF55729 11 215 4.29E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 SUPERFAMILY SSF51735 4 198 1.02E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 PIRSF PIRSF000110 1 499 1.4E-174 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 227 244 2.3E-51 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 335 361 2.3E-51 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 245 261 2.3E-51 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 151 164 2.3E-51 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 175 203 2.3E-51 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 7 497 81.078 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 SUPERFAMILY SSF55347 190 496 7.19E-109 T 14-10-2018 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 197 496 2.0E-112 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 12 195 7.3E-58 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 Gene3D G3DSA:3.30.360.10 184 497 2.0E-124 T 14-10-2018 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 Gene3D G3DSA:3.40.50.720 4 183 2.9E-54 T 14-10-2018 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 496 2.0E-185 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14410 9d335cf3760a3fbf616d999959cbe4d9 505 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 185 191 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 C4901_14030 5c081b264ebb1b1c50cf150d15ba7009 142 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 141 17.676 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 C4901_14030 5c081b264ebb1b1c50cf150d15ba7009 142 SUPERFAMILY SSF52080 10 141 6.02E-37 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily C4901_14030 5c081b264ebb1b1c50cf150d15ba7009 142 Gene3D G3DSA:3.100.10.10 68 142 5.4E-11 T 14-10-2018 C4901_14030 5c081b264ebb1b1c50cf150d15ba7009 142 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 3 141 2.9E-40 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14030 5c081b264ebb1b1c50cf150d15ba7009 142 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 27 141 2.5E-26 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P C4901_07970 d33742d9bf436ed80e4bb5c3533f20c3 86 PIRSF PIRSF003113 1 85 6.1E-21 T 14-10-2018 IPR002634 BolA protein C4901_07970 d33742d9bf436ed80e4bb5c3533f20c3 86 Pfam PF01722 BolA-like protein 11 83 2.1E-22 T 14-10-2018 IPR002634 BolA protein C4901_07970 d33742d9bf436ed80e4bb5c3533f20c3 86 SUPERFAMILY SSF82657 4 85 7.72E-23 T 14-10-2018 IPR036065 BolA-like superfamily C4901_07970 d33742d9bf436ed80e4bb5c3533f20c3 86 Gene3D G3DSA:3.30.300.90 2 86 1.3E-21 T 14-10-2018 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 Pfam PF00175 Oxidoreductase NAD-binding domain 209 314 9.1E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 Pfam PF00970 Oxidoreductase FAD-binding domain 105 197 1.8E-15 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 233 242 2.8E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 132 142 2.8E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 148 155 2.8E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 208 227 2.8E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 Gene3D G3DSA:3.10.20.30 1 98 6.0E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 SUPERFAMILY SSF63380 102 199 3.4E-25 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 SUPERFAMILY SSF52343 201 333 1.02E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 Gene3D G3DSA:2.40.30.10 101 199 3.7E-26 T 14-10-2018 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 Gene3D G3DSA:3.40.50.80 200 335 6.4E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 81 6.9E-16 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 SUPERFAMILY SSF54292 1 89 3.41E-27 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 192 201 1.2E-20 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 208 227 1.2E-20 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 233 242 1.2E-20 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 144 1.2E-20 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 148 155 1.2E-20 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_01955 bc7f2fc38f3e08dc68432ae2f4e20354 342 PRINTS PR00410 Phenol hydroxylase reductase family signature 300 308 1.2E-20 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 C4901_10805 72a8dcc8c32e3d31f1888f98bdb86eda 371 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 34.029 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C4901_10805 72a8dcc8c32e3d31f1888f98bdb86eda 371 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 4.7E-129 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C4901_10805 72a8dcc8c32e3d31f1888f98bdb86eda 371 SUPERFAMILY SSF51717 15 207 5.81E-10 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C4901_10805 72a8dcc8c32e3d31f1888f98bdb86eda 371 Gene3D G3DSA:3.20.20.20 1 261 5.8E-103 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C4901_10805 72a8dcc8c32e3d31f1888f98bdb86eda 371 SUPERFAMILY SSF56014 266 352 1.74E-9 T 14-10-2018 C4901_10805 72a8dcc8c32e3d31f1888f98bdb86eda 371 Pfam PF04551 GcpE protein 13 352 1.3E-130 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C4901_10805 72a8dcc8c32e3d31f1888f98bdb86eda 371 Gene3D G3DSA:3.30.413.10 262 361 1.3E-26 T 14-10-2018 C4901_10805 72a8dcc8c32e3d31f1888f98bdb86eda 371 PIRSF PIRSF004640 1 362 3.3E-145 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Gene3D G3DSA:3.40.50.880 985 1297 1.3E-123 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Gene3D G3DSA:3.90.650.10 818 984 4.1E-30 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 SUPERFAMILY SSF55326 632 820 4.71E-59 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 SMART SM01211 1042 1296 1.0E-142 T 14-10-2018 C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 436 589 4.7E-31 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Pfam PF02769 AIR synthase related protein, C-terminal domain 839 972 2.6E-13 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Gene3D G3DSA:3.30.1330.10 618 813 7.6E-20 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Gene3D G3DSA:3.90.650.10 420 595 4.4E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 10 1295 0.0 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 SUPERFAMILY SSF52317 1040 1296 2.32E-88 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 5 1297 19.782 T 14-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Gene3D G3DSA:1.10.8.750 156 216 7.5E-20 T 14-10-2018 C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1042 1296 1.9E-97 T 14-10-2018 C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 SUPERFAMILY SSF56042 830 1033 1.0E-46 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 SUPERFAMILY SSF82697 7 149 3.35E-37 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 SUPERFAMILY SSF109736 163 223 1.1E-19 T 14-10-2018 C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 SUPERFAMILY SSF55326 224 426 5.93E-51 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 SUPERFAMILY SSF56042 432 659 2.39E-49 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_03770 ca914f3c75bb7f0312547a1069dd646d 1297 Gene3D G3DSA:3.30.1330.10 217 419 3.0E-38 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_09035 6ccf1faa5038af142796e80655ea52b6 70 Gene3D G3DSA:1.10.10.1400 2 40 8.8E-7 T 14-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily C4901_09035 6ccf1faa5038af142796e80655ea52b6 70 Pfam PF03592 Terminase small subunit 4 39 9.9E-6 T 14-10-2018 IPR005335 Terminase small subunit GO:0006323 C4901_15950 3ca356733fe002d92bdcd4e46668a9dc 326 Gene3D G3DSA:2.160.10.10 207 324 7.5E-7 T 14-10-2018 C4901_15950 3ca356733fe002d92bdcd4e46668a9dc 326 SUPERFAMILY SSF51161 227 314 5.13E-10 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 42 149 7.4E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 SMART SM00382 38 156 2.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 SUPERFAMILY SSF52540 3 218 7.38E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 Gene3D G3DSA:3.40.50.300 1 152 5.0E-39 T 14-10-2018 C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 Pfam PF12002 MgsA AAA+ ATPase C terminal 253 419 4.0E-65 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 Gene3D G3DSA:1.10.3710.10 331 428 3.1E-30 T 14-10-2018 C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 SUPERFAMILY SSF48019 237 419 9.78E-71 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 Pfam PF16193 AAA C-terminal domain 178 252 8.6E-20 T 14-10-2018 IPR032423 AAA C-terminal domain C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 Gene3D G3DSA:1.10.8.60 154 222 2.5E-9 T 14-10-2018 C4901_11875 8c60188e0c77beae06f8decc0ff7bd8b 429 Gene3D G3DSA:1.20.272.10 226 330 1.7E-41 T 14-10-2018 C4901_11200 bbf779ffb24b930006485d285d1c907e 97 Gene3D G3DSA:3.30.2310.20 1 95 1.4E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_11200 bbf779ffb24b930006485d285d1c907e 97 PIRSF PIRSF029218 1 97 7.0E-27 T 14-10-2018 IPR028344 Toxin-antitoxin system, toxin component ParE1/4 C4901_11200 bbf779ffb24b930006485d285d1c907e 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 90 2.1E-16 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C4901_09425 d4d0ccd0152e416258469f079d1c98ef 161 Gene3D G3DSA:2.40.440.10 1 161 2.3E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C4901_09425 d4d0ccd0152e416258469f079d1c98ef 161 SUPERFAMILY SSF141523 3 160 2.88E-24 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like C4901_09425 d4d0ccd0152e416258469f079d1c98ef 161 Pfam PF03734 L,D-transpeptidase catalytic domain 3 159 1.5E-17 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 C4901_14785 5f67ee23399dd0163b6472bede3bf429 98 Pfam PF04319 NifZ domain 15 86 2.0E-31 T 14-10-2018 IPR007415 Nitrogenase MoFe maturation protein, NifZ GO:0009399 C4901_09385 3c65bba8cc89d1e7ac3d2bbcbf04cf5a 250 PIRSF PIRSF006648 2 249 5.2E-60 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_09385 3c65bba8cc89d1e7ac3d2bbcbf04cf5a 250 Pfam PF01061 ABC-2 type transporter 5 214 6.5E-34 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 C4901_09385 3c65bba8cc89d1e7ac3d2bbcbf04cf5a 250 PRINTS PR00164 ABC-2 type transport system membrane protein signature 136 160 1.0E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_09385 3c65bba8cc89d1e7ac3d2bbcbf04cf5a 250 PRINTS PR00164 ABC-2 type transport system membrane protein signature 173 192 1.0E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_09385 3c65bba8cc89d1e7ac3d2bbcbf04cf5a 250 PRINTS PR00164 ABC-2 type transport system membrane protein signature 24 45 1.0E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_09385 3c65bba8cc89d1e7ac3d2bbcbf04cf5a 250 PRINTS PR00164 ABC-2 type transport system membrane protein signature 193 212 1.0E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_09385 3c65bba8cc89d1e7ac3d2bbcbf04cf5a 250 PRINTS PR00164 ABC-2 type transport system membrane protein signature 54 76 1.0E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_13175 bc04a7ff5ad67912bb7737023298e5c0 289 SUPERFAMILY SSF52540 20 272 2.05E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13175 bc04a7ff5ad67912bb7737023298e5c0 289 Pfam PF00437 Type II/IV secretion system protein 7 181 8.2E-53 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_13175 bc04a7ff5ad67912bb7737023298e5c0 289 Gene3D G3DSA:3.40.50.300 17 278 2.3E-93 T 14-10-2018 C4901_13175 bc04a7ff5ad67912bb7737023298e5c0 289 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 109 123 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 SUPERFAMILY SSF51905 6 355 4.42E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 Gene3D G3DSA:3.50.50.60 5 371 6.2E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 SUPERFAMILY SSF56645 1389 1483 6.54E-19 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 SUPERFAMILY SSF47203 839 960 9.99E-6 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 SUPERFAMILY SSF56645 1267 1303 1.03E-6 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 2154 2241 2.6E-17 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 1396 1459 4.0E-9 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 SUPERFAMILY SSF54373 220 287 7.45E-5 T 14-10-2018 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 1284 1296 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 Pfam PF00890 FAD binding domain 7 51 4.2E-7 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 SUPERFAMILY SSF52467 2153 2263 3.66E-20 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 Gene3D G3DSA:1.20.140.10 1508 1612 3.4E-13 T 14-10-2018 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 SUPERFAMILY SSF47203 1472 1610 2.09E-13 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 Gene3D G3DSA:3.40.50.1220 2150 2285 3.0E-29 T 14-10-2018 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 SUPERFAMILY SSF56645 1041 1147 6.02E-6 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 1474 1609 1.4E-11 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 Gene3D G3DSA:1.10.540.10 1046 1155 1.1E-6 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 PRINTS PR00419 Adrenodoxin reductase family signature 156 170 2.0E-5 T 14-10-2018 C4901_16805 32b88437a2b3dbefe77458b500458e9b 2288 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 2.0E-5 T 14-10-2018 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 TIGRFAM TIGR01862 N2-ase-Ialpha: nitrogenase component I, alpha chain 31 476 2.1E-189 T 14-10-2018 IPR010143 Nitrogenase component 1, alpha chain GO:0009399|GO:0016163|GO:0051536|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 Gene3D G3DSA:3.40.50.1980 49 482 3.2E-219 T 14-10-2018 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 82 89 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 153 167 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 Gene3D G3DSA:3.40.50.1980 214 352 3.2E-219 T 14-10-2018 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 63 470 3.9E-108 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 SUPERFAMILY SSF53807 12 483 5.02E-165 T 14-10-2018 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 Gene3D G3DSA:3.40.50.1980 68 213 3.2E-219 T 14-10-2018 C4901_14745 166e4f6d77df0ed352bce6f8576a97b0 486 TIGRFAM TIGR01282 nifD: nitrogenase molybdenum-iron protein alpha chain 16 482 3.0E-265 T 14-10-2018 IPR005972 Nitrogenase molybdenum-iron protein alpha chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 59 76 4.6E-58 T 14-10-2018 C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 200 223 4.6E-58 T 14-10-2018 C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 33 54 4.6E-58 T 14-10-2018 C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 107 125 4.6E-58 T 14-10-2018 C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 162 181 4.6E-58 T 14-10-2018 C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 82 105 4.6E-58 T 14-10-2018 C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 Pfam PF03379 CcmB protein 9 224 6.5E-70 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 PIRSF PIRSF002764 4 227 2.9E-75 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria C4901_12495 891a93f4fa26de57ac2455ebb73ba8d3 227 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 13 223 4.3E-70 T 14-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria C4901_16085 ef696521a32d96f6e04eac556e001698 202 SMART SM00072 4 185 4.1E-70 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit C4901_16085 ef696521a32d96f6e04eac556e001698 202 Gene3D G3DSA:3.40.50.300 9 181 3.1E-68 T 14-10-2018 C4901_16085 ef696521a32d96f6e04eac556e001698 202 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 182 2.5E-70 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 C4901_16085 ef696521a32d96f6e04eac556e001698 202 Hamap MF_00328 Guanylate kinase [gmk]. 3 185 35.097 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 C4901_16085 ef696521a32d96f6e04eac556e001698 202 Pfam PF00625 Guanylate kinase 6 182 1.3E-56 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit C4901_16085 ef696521a32d96f6e04eac556e001698 202 SUPERFAMILY SSF52540 4 183 1.35E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16085 ef696521a32d96f6e04eac556e001698 202 Gene3D G3DSA:3.30.63.10 35 94 3.1E-68 T 14-10-2018 C4901_16085 ef696521a32d96f6e04eac556e001698 202 ProSitePatterns PS00856 Guanylate kinase-like signature. 38 55 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 C4901_09245 4a623e4037ae0cc37f97e115100c2b4a 89 Gene3D G3DSA:1.20.1260.30 3 71 1.6E-5 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily C4901_09245 4a623e4037ae0cc37f97e115100c2b4a 89 SUPERFAMILY SSF53335 8 47 1.41E-6 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_09245 4a623e4037ae0cc37f97e115100c2b4a 89 Pfam PF12161 HsdM N-terminal domain 10 61 1.1E-12 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain C4901_13600 4f770616a306b9750ca44c4b6447900a 85 Pfam PF00665 Integrase core domain 4 58 9.8E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_13600 4f770616a306b9750ca44c4b6447900a 85 SUPERFAMILY SSF53098 3 70 4.36E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_13600 4f770616a306b9750ca44c4b6447900a 85 Gene3D G3DSA:3.30.420.10 2 73 2.9E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_10755 80311f65bc371c4f3da403b46d5332d2 417 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 286 369 2.2E-20 T 14-10-2018 IPR015032 MTH538 TIR-like domain C4901_10755 80311f65bc371c4f3da403b46d5332d2 417 Pfam PF14319 Transposase zinc-binding domain 9 117 3.2E-38 T 14-10-2018 IPR026889 Transposase zinc-binding domain C4901_10755 80311f65bc371c4f3da403b46d5332d2 417 SUPERFAMILY SSF52206 286 361 3.79E-10 T 14-10-2018 IPR036490 Hypothetical protein MTH538 superfamily C4901_10755 80311f65bc371c4f3da403b46d5332d2 417 Pfam PF04986 Putative transposase 143 307 7.5E-48 T 14-10-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 C4901_05360 93ac00ae33e7c0d195c8f26ee7a02b60 369 TIGRFAM TIGR03470 HpnH: hopanoid biosynthesis associated radical SAM protein HpnH 1 321 5.7E-166 T 14-10-2018 IPR017833 Hopanoid biosynthesis associated radical SAM protein HpnH C4901_05360 93ac00ae33e7c0d195c8f26ee7a02b60 369 Pfam PF11946 Domain of unknown function (DUF3463) 195 331 4.2E-58 T 14-10-2018 IPR022563 Domain of unknown function DUF3463 C4901_05360 93ac00ae33e7c0d195c8f26ee7a02b60 369 Pfam PF04055 Radical SAM superfamily 34 187 6.7E-18 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_05360 93ac00ae33e7c0d195c8f26ee7a02b60 369 SUPERFAMILY SSF102114 23 310 3.92E-56 T 14-10-2018 C4901_05360 93ac00ae33e7c0d195c8f26ee7a02b60 369 Gene3D G3DSA:3.20.20.70 26 294 1.1E-33 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_09770 50d37e38d122ed00fc6742329e073ae0 275 SUPERFAMILY SSF56300 8 252 1.15E-21 T 14-10-2018 C4901_09770 50d37e38d122ed00fc6742329e073ae0 275 Pfam PF00149 Calcineurin-like phosphoesterase 9 235 7.4E-7 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C4901_09770 50d37e38d122ed00fc6742329e073ae0 275 Gene3D G3DSA:3.60.21.10 7 259 1.3E-11 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_16770 abdcfb0a568b5650c92ccf3ecb5b52ff 297 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 8 281 1.4E-96 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 C4901_16770 abdcfb0a568b5650c92ccf3ecb5b52ff 297 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 198 204 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C4901_16770 abdcfb0a568b5650c92ccf3ecb5b52ff 297 SUPERFAMILY SSF53335 34 261 3.32E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_16770 abdcfb0a568b5650c92ccf3ecb5b52ff 297 PIRSF PIRSF037167 4 293 7.1E-94 T 14-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 C4901_16770 abdcfb0a568b5650c92ccf3ecb5b52ff 297 Gene3D G3DSA:3.40.50.150 102 267 8.5E-45 T 14-10-2018 C4901_16770 abdcfb0a568b5650c92ccf3ecb5b52ff 297 Pfam PF05175 Methyltransferase small domain 128 209 2.3E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 C4901_16770 abdcfb0a568b5650c92ccf3ecb5b52ff 297 Gene3D G3DSA:1.10.8.10 13 98 3.4E-9 T 14-10-2018 C4901_16770 abdcfb0a568b5650c92ccf3ecb5b52ff 297 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 66 279 2.5E-59 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 C4901_03310 3bc92fe351345b9724717dc499dfaada 278 SUPERFAMILY SSF46626 23 196 6.26E-36 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_03310 3bc92fe351345b9724717dc499dfaada 278 Gene3D G3DSA:1.10.760.10 32 198 2.1E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_03310 3bc92fe351345b9724717dc499dfaada 278 PRINTS PR00603 Cytochrome C1 signature 46 65 7.9E-5 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 C4901_03310 3bc92fe351345b9724717dc499dfaada 278 PRINTS PR00603 Cytochrome C1 signature 198 213 7.9E-5 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 C4901_03310 3bc92fe351345b9724717dc499dfaada 278 PRINTS PR00603 Cytochrome C1 signature 179 198 7.9E-5 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 C4901_03310 3bc92fe351345b9724717dc499dfaada 278 Pfam PF02167 Cytochrome C1 family 106 213 6.4E-7 T 14-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 C4901_13025 d99c9cf25dc060c7bc84d88b1927aff5 146 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 48 144 1.6E-27 T 14-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ C4901_13025 d99c9cf25dc060c7bc84d88b1927aff5 146 Gene3D G3DSA:2.60.40.10 43 146 7.0E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_13025 d99c9cf25dc060c7bc84d88b1927aff5 146 SUPERFAMILY SSF81296 49 145 3.64E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_13025 d99c9cf25dc060c7bc84d88b1927aff5 146 Pfam PF08770 Sulphur oxidation protein SoxZ 51 142 6.2E-26 T 14-10-2018 IPR014880 Sulphur oxidation protein SoxZ C4901_07930 d99c9cf25dc060c7bc84d88b1927aff5 146 TIGRFAM TIGR04490 SoxZ_true: thiosulfate oxidation carrier complex protein SoxZ 48 144 1.6E-27 T 14-10-2018 IPR030995 Thiosulfate oxidation carrier complex protein SoxZ C4901_07930 d99c9cf25dc060c7bc84d88b1927aff5 146 Gene3D G3DSA:2.60.40.10 43 146 7.0E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_07930 d99c9cf25dc060c7bc84d88b1927aff5 146 SUPERFAMILY SSF81296 49 145 3.64E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_07930 d99c9cf25dc060c7bc84d88b1927aff5 146 Pfam PF08770 Sulphur oxidation protein SoxZ 51 142 6.2E-26 T 14-10-2018 IPR014880 Sulphur oxidation protein SoxZ C4901_16400 1ab0c57c243cc00a47ddc51c56a85954 133 Gene3D G3DSA:3.30.360.110 1 62 1.5E-27 T 14-10-2018 C4901_16400 1ab0c57c243cc00a47ddc51c56a85954 133 SUPERFAMILY SSF56276 3 115 3.73E-40 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 C4901_16400 1ab0c57c243cc00a47ddc51c56a85954 133 Gene3D G3DSA:3.30.160.750 63 129 1.3E-23 T 14-10-2018 C4901_16400 1ab0c57c243cc00a47ddc51c56a85954 133 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 117 30.973 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 C4901_16400 1ab0c57c243cc00a47ddc51c56a85954 133 Pfam PF02675 S-adenosylmethionine decarboxylase 8 113 3.2E-37 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 C4901_16400 1ab0c57c243cc00a47ddc51c56a85954 133 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 113 1.3E-42 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 C4901_14595 23de4e3059854b606e1ed5c48f64c513 370 SMART SM00382 122 247 0.0055 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_14595 23de4e3059854b606e1ed5c48f64c513 370 Pfam PF00437 Type II/IV secretion system protein 34 249 5.4E-38 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_14595 23de4e3059854b606e1ed5c48f64c513 370 Gene3D G3DSA:3.40.50.300 101 358 7.3E-91 T 14-10-2018 C4901_14595 23de4e3059854b606e1ed5c48f64c513 370 SUPERFAMILY SSF52540 5 337 9.67E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14595 23de4e3059854b606e1ed5c48f64c513 370 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 4 344 1.1E-142 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C4901_14595 23de4e3059854b606e1ed5c48f64c513 370 Gene3D G3DSA:3.30.450.90 2 99 6.6E-33 T 14-10-2018 C4901_10890 05377bbde96713644c5152f6216d056d 107 Gene3D G3DSA:3.30.70.20 2 105 4.8E-33 T 14-10-2018 C4901_10890 05377bbde96713644c5152f6216d056d 107 Pfam PF00037 4Fe-4S binding domain 34 55 5.7E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_10890 05377bbde96713644c5152f6216d056d 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 2.4E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C4901_10890 05377bbde96713644c5152f6216d056d 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 2.4E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C4901_10890 05377bbde96713644c5152f6216d056d 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 2.4E-16 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C4901_10890 05377bbde96713644c5152f6216d056d 107 SUPERFAMILY SSF54862 3 96 1.26E-25 T 14-10-2018 C4901_10890 05377bbde96713644c5152f6216d056d 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 106 7.0E-20 T 14-10-2018 IPR022569 Ferredoxin, C-terminal C4901_10890 05377bbde96713644c5152f6216d056d 107 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_15530 df153ea69311fb9b0d62222862546834 338 PIRSF PIRSF002936 37 338 1.6E-131 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C4901_15530 df153ea69311fb9b0d62222862546834 338 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 66 291 1.6E-43 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 C4901_15530 df153ea69311fb9b0d62222862546834 338 Gene3D G3DSA:3.40.50.620 45 248 5.7E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_15530 df153ea69311fb9b0d62222862546834 338 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 46 338 6.9E-127 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 C4901_15530 df153ea69311fb9b0d62222862546834 338 SUPERFAMILY SSF52402 45 246 5.51E-63 T 14-10-2018 C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 Pfam PF17191 RecG wedge domain 22 177 1.8E-16 T 14-10-2018 IPR033454 RecG, wedge domain C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 Gene3D G3DSA:2.40.50.140 55 150 4.6E-7 T 14-10-2018 C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 SUPERFAMILY SSF50249 15 181 4.28E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 Pfam PF00270 DEAD/DEAH box helicase 289 430 2.2E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 Gene3D G3DSA:3.40.50.300 217 445 1.6E-72 T 14-10-2018 C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 Gene3D G3DSA:3.40.50.300 453 624 6.9E-48 T 14-10-2018 C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 SMART SM00487 263 455 7.2E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 SMART SM00490 499 583 2.9E-22 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 Pfam PF00271 Helicase conserved C-terminal domain 478 583 8.3E-16 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 Gene3D G3DSA:1.10.150.20 15 50 7.0E-7 T 14-10-2018 C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 SUPERFAMILY SSF52540 200 449 2.47E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16065 d44b21ab81afab160eee5374e3e6ced3 687 SUPERFAMILY SSF52540 447 648 2.08E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08555 d8a738aa2406ecd3f50d63f44464d6ce 87 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 40 3.6E-6 T 14-10-2018 C4901_08555 d8a738aa2406ecd3f50d63f44464d6ce 87 SUPERFAMILY SSF143120 2 41 1.03E-5 T 14-10-2018 IPR036165 YefM-like superfamily C4901_08555 d8a738aa2406ecd3f50d63f44464d6ce 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 45 4.9E-9 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 Gene3D G3DSA:1.20.59.20 255 339 2.6E-6 T 14-10-2018 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 Gene3D G3DSA:3.40.50.620 40 253 5.6E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 SUPERFAMILY SSF82829 256 341 1.18E-8 T 14-10-2018 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 47 224 2.0E-48 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 32 331 22.559 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 389 433 2.8E-10 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 Pfam PF09179 TilS substrate binding domain 269 336 9.9E-5 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 SUPERFAMILY SSF56037 365 460 3.4E-19 T 14-10-2018 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 SUPERFAMILY SSF52402 44 250 5.59E-56 T 14-10-2018 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 Pfam PF11734 TilS substrate C-terminal domain 391 457 3.6E-17 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 Pfam PF01171 PP-loop family 47 220 4.5E-50 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 C4901_10355 b9ec07a9eb387ee71628b79db188e539 463 SMART SM00977 389 461 8.5E-17 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 C4901_11125 8dc7df4e3016ba6941a1ce0c8ed1bdf5 483 Pfam PF13086 AAA domain 320 397 6.5E-8 T 14-10-2018 C4901_11125 8dc7df4e3016ba6941a1ce0c8ed1bdf5 483 Gene3D G3DSA:3.40.50.300 307 474 3.5E-16 T 14-10-2018 C4901_11125 8dc7df4e3016ba6941a1ce0c8ed1bdf5 483 SUPERFAMILY SSF52540 277 390 2.08E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14820 49df45844329dd89d4d8a82918429e32 95 SUPERFAMILY SSF54862 31 93 5.86E-13 T 14-10-2018 C4901_14820 49df45844329dd89d4d8a82918429e32 95 PIRSF PIRSF036548 1 95 1.3E-37 T 14-10-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 C4901_14820 49df45844329dd89d4d8a82918429e32 95 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_14820 49df45844329dd89d4d8a82918429e32 95 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 16 89 5.7E-7 T 14-10-2018 C4901_14820 49df45844329dd89d4d8a82918429e32 95 Gene3D G3DSA:3.30.70.20 8 89 1.5E-12 T 14-10-2018 C4901_13065 3e4dab36820d05dbb91670eca94cbfe9 208 Pfam PF01914 MarC family integral membrane protein 5 201 5.4E-53 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 C4901_13065 3e4dab36820d05dbb91670eca94cbfe9 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 200 3.3E-52 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 C4901_03590 12fbf4a3127ec3a34ca64ca99763a8f6 288 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 212 223 1.7E-23 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C4901_03590 12fbf4a3127ec3a34ca64ca99763a8f6 288 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 201 211 1.7E-23 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C4901_03590 12fbf4a3127ec3a34ca64ca99763a8f6 288 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 224 239 1.7E-23 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C4901_03590 12fbf4a3127ec3a34ca64ca99763a8f6 288 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 144 161 1.7E-23 T 14-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial C4901_03590 12fbf4a3127ec3a34ca64ca99763a8f6 288 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 19 125 4.7E-29 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal C4901_03590 12fbf4a3127ec3a34ca64ca99763a8f6 288 Pfam PF01478 Type IV leader peptidase family 136 243 1.2E-22 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 C4901_05750 53583973bf69cd2af9fad0ff2ddaebf1 251 Pfam PF01925 Sulfite exporter TauE/SafE 23 248 4.1E-33 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C4901_15870 655cde0972abb19ed6f6ac23bb568138 455 Pfam PF00171 Aldehyde dehydrogenase family 3 450 9.6E-137 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C4901_15870 655cde0972abb19ed6f6ac23bb568138 455 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 255 266 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 C4901_15870 655cde0972abb19ed6f6ac23bb568138 455 Gene3D G3DSA:3.40.309.10 233 422 1.8E-150 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C4901_15870 655cde0972abb19ed6f6ac23bb568138 455 Gene3D G3DSA:3.40.605.10 3 446 1.8E-150 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C4901_15870 655cde0972abb19ed6f6ac23bb568138 455 SUPERFAMILY SSF53720 3 453 9.56E-144 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C4901_05025 26efb031dba84d05cf28d661203920a8 541 Pfam PF01593 Flavin containing amine oxidoreductase 211 266 5.3E-5 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 C4901_05025 26efb031dba84d05cf28d661203920a8 541 PIRSF PIRSF038984 1 535 5.6E-227 T 14-10-2018 IPR028348 FAD dependent protein C4901_05025 26efb031dba84d05cf28d661203920a8 541 Gene3D G3DSA:3.30.70.2700 1 80 6.0E-23 T 14-10-2018 C4901_05025 26efb031dba84d05cf28d661203920a8 541 Gene3D G3DSA:3.50.50.60 85 295 1.2E-75 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05025 26efb031dba84d05cf28d661203920a8 541 Gene3D G3DSA:3.50.50.60 470 533 1.1E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05025 26efb031dba84d05cf28d661203920a8 541 SUPERFAMILY SSF51905 100 529 4.61E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 SMART SM00471 69 181 1.5E-12 T 14-10-2018 IPR003607 HD/PDEase domain C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 Gene3D G3DSA:1.10.3210.10 27 218 3.4E-76 T 14-10-2018 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 SUPERFAMILY SSF109604 32 218 8.16E-69 T 14-10-2018 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 Pfam PF04607 Region found in RelA / SpoT proteins 263 372 7.5E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 Pfam PF13291 ACT domain 652 725 8.6E-15 T 14-10-2018 IPR002912 ACT domain C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 Gene3D G3DSA:3.30.70.260 650 727 6.7E-15 T 14-10-2018 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 Gene3D G3DSA:3.10.20.30 406 480 9.5E-32 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 SUPERFAMILY SSF81301 208 417 4.41E-63 T 14-10-2018 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 SMART SM00954 263 373 3.8E-65 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 SUPERFAMILY SSF55021 650 723 5.24E-9 T 14-10-2018 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 54 724 3.7E-229 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 Pfam PF13328 HD domain 55 203 1.9E-51 T 14-10-2018 IPR003607 HD/PDEase domain C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 SUPERFAMILY SSF81271 400 472 2.62E-23 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 Gene3D G3DSA:3.30.460.10 221 353 3.2E-47 T 14-10-2018 C4901_16075 e63fbb3add3b53a52ae64811ed155bc4 728 Pfam PF02824 TGS domain 413 472 1.2E-21 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 371 7.6E-24 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 SUPERFAMILY SSF51419 26 285 1.6E-78 T 14-10-2018 IPR029066 PLP-binding barrel C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 414 42.167 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 273 292 1.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 75 1.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 77 89 1.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 371 384 1.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 190 203 1.4E-26 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 7 413 4.4E-152 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 57 75 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 37 283 6.5E-70 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 SUPERFAMILY SSF50621 257 415 5.23E-54 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 75 92 2.5E-32 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 164 173 2.5E-32 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 301 319 2.5E-32 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 PRINTS PR01181 Diaminopimelate decarboxylase signature 381 403 2.5E-32 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 Gene3D G3DSA:2.40.37.10 14 410 3.0E-147 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C4901_02300 c55d7df644eaf7a82010cc7c3fe0ad5d 422 Gene3D G3DSA:3.20.20.10 34 278 3.0E-147 T 14-10-2018 IPR029066 PLP-binding barrel C4901_13030 d037a4337324133aaaee1122aac241a1 278 TIGRFAM TIGR04484 thiosulf_SoxA: sulfur oxidation c-type cytochrome SoxA 72 277 3.4E-59 T 14-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 C4901_13030 d037a4337324133aaaee1122aac241a1 278 SUPERFAMILY SSF46626 170 277 4.14E-25 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13030 d037a4337324133aaaee1122aac241a1 278 PIRSF PIRSF038455 1 278 4.3E-78 T 14-10-2018 IPR025710 SoxAX cytochrome complex subunit A GO:0009055|GO:0016491|GO:0019417|GO:0020037|GO:0070069 C4901_13030 d037a4337324133aaaee1122aac241a1 278 Gene3D G3DSA:1.10.760.10 73 158 4.1E-55 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13030 d037a4337324133aaaee1122aac241a1 278 Gene3D G3DSA:1.10.760.10 66 277 4.1E-55 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13030 d037a4337324133aaaee1122aac241a1 278 SUPERFAMILY SSF46626 48 163 1.16E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_07315 823a2d9f35796f211f35df921f74057f 785 Gene3D G3DSA:3.40.50.300 137 354 5.4E-34 T 14-10-2018 C4901_07315 823a2d9f35796f211f35df921f74057f 785 Pfam PF13604 AAA domain 179 366 9.2E-39 T 14-10-2018 C4901_07315 823a2d9f35796f211f35df921f74057f 785 Gene3D G3DSA:2.30.30.940 588 665 1.0E-5 T 14-10-2018 C4901_07315 823a2d9f35796f211f35df921f74057f 785 SUPERFAMILY SSF52540 293 721 5.04E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07315 823a2d9f35796f211f35df921f74057f 785 SUPERFAMILY SSF52540 165 326 1.47E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07315 823a2d9f35796f211f35df921f74057f 785 Gene3D G3DSA:3.40.50.300 584 721 1.0E-5 T 14-10-2018 C4901_06835 f15516dad35d045b496e8fa350828615 550 SUPERFAMILY SSF158472 98 149 3.4E-6 T 14-10-2018 C4901_06835 f15516dad35d045b496e8fa350828615 550 SUPERFAMILY SSF55874 412 533 1.2E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_06835 f15516dad35d045b496e8fa350828615 550 PIRSF PIRSF003167 72 545 7.8E-84 T 14-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 C4901_06835 f15516dad35d045b496e8fa350828615 550 Gene3D G3DSA:3.30.450.40 161 330 5.3E-17 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_06835 f15516dad35d045b496e8fa350828615 550 SUPERFAMILY SSF55781 180 329 3.49E-15 T 14-10-2018 C4901_06835 f15516dad35d045b496e8fa350828615 550 Pfam PF07730 Histidine kinase 334 399 2.0E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 C4901_06835 f15516dad35d045b496e8fa350828615 550 SMART SM00065 180 327 0.0014 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_06835 f15516dad35d045b496e8fa350828615 550 Gene3D G3DSA:1.20.1480.50 70 154 9.6E-9 T 14-10-2018 C4901_06835 f15516dad35d045b496e8fa350828615 550 Pfam PF13185 GAF domain 179 318 6.8E-9 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_06835 f15516dad35d045b496e8fa350828615 550 Gene3D G3DSA:3.30.565.10 402 534 4.3E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_06835 f15516dad35d045b496e8fa350828615 550 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 440 534 7.0E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06835 f15516dad35d045b496e8fa350828615 550 SMART SM00387 438 536 9.6E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06835 f15516dad35d045b496e8fa350828615 550 SMART SM00304 344 395 89.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_06835 f15516dad35d045b496e8fa350828615 550 SMART SM00304 98 151 5.2E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_03525 5522e669600ee198d3f2b7c6aec7bb9a 144 SUPERFAMILY SSF110916 21 102 1.24E-11 T 14-10-2018 C4901_03525 5522e669600ee198d3f2b7c6aec7bb9a 144 Pfam PF00472 RF-1 domain 12 137 4.9E-20 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 C4901_03525 5522e669600ee198d3f2b7c6aec7bb9a 144 Gene3D G3DSA:3.30.160.20 5 141 9.8E-38 T 14-10-2018 C4901_03525 5522e669600ee198d3f2b7c6aec7bb9a 144 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 25 41 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 286 2.0E-22 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 SUPERFAMILY SSF52413 298 424 9.02E-26 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 Gene3D G3DSA:3.40.50.720 196 425 1.2E-53 T 14-10-2018 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 399 3.6E-115 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 SMART SM00984 313 413 4.1E-26 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 Gene3D G3DSA:3.40.50.720 1 192 2.4E-59 T 14-10-2018 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 PIRSF PIRSF500136 1 426 1.0E-141 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 PIRSF PIRSF000124 2 426 9.9E-56 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 177 5.3E-31 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 SUPERFAMILY SSF48179 197 288 2.38E-23 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 410 1.1E-18 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C4901_11760 a70ec394074c706ab6f93ceefbd556c8 426 SUPERFAMILY SSF51735 3 189 1.4E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.343 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 Gene3D G3DSA:3.30.70.600 1 103 5.3E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 102 9.4E-47 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.9E-36 T 14-10-2018 IPR027486 Ribosomal protein S10 domain C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 SMART SM01403 7 101 5.9E-57 T 14-10-2018 IPR027486 Ribosomal protein S10 domain C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 SUPERFAMILY SSF54999 5 102 2.35E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14130 3e5284a391f3d11bd92a3c6baa31722a 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_02070 fc0a7eb770b169f936477ce668a8c4c6 185 Pfam PF05685 Putative restriction endonuclease 19 172 5.2E-21 T 14-10-2018 IPR008538 Domain of unknown function DUF820 C4901_02070 fc0a7eb770b169f936477ce668a8c4c6 185 Gene3D G3DSA:3.90.1570.10 2 184 1.4E-33 T 14-10-2018 C4901_02070 fc0a7eb770b169f936477ce668a8c4c6 185 SUPERFAMILY SSF52980 4 184 6.43E-33 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C4901_10050 173f9f67199185cc9dce85c665ffae1a 561 Pfam PF00361 Proton-conducting membrane transporter 124 350 6.3E-47 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_10050 173f9f67199185cc9dce85c665ffae1a 561 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 69 111 2.2E-14 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_10050 173f9f67199185cc9dce85c665ffae1a 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 9.9E-28 T 14-10-2018 C4901_10050 173f9f67199185cc9dce85c665ffae1a 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 9.9E-28 T 14-10-2018 C4901_10050 173f9f67199185cc9dce85c665ffae1a 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 101 121 9.9E-28 T 14-10-2018 C4901_10050 173f9f67199185cc9dce85c665ffae1a 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 9.9E-28 T 14-10-2018 C4901_10050 173f9f67199185cc9dce85c665ffae1a 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 148 169 9.9E-28 T 14-10-2018 C4901_10050 173f9f67199185cc9dce85c665ffae1a 561 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 73 98 9.9E-28 T 14-10-2018 C4901_05460 f30b1f1d5ddcb184314ce5d1204d92ea 523 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.7E-6 T 14-10-2018 C4901_05460 f30b1f1d5ddcb184314ce5d1204d92ea 523 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 326 1.7E-6 T 14-10-2018 C4901_05460 f30b1f1d5ddcb184314ce5d1204d92ea 523 Pfam PF05199 GMC oxidoreductase 456 513 3.2E-18 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 C4901_05460 f30b1f1d5ddcb184314ce5d1204d92ea 523 Pfam PF00732 GMC oxidoreductase 199 310 2.3E-5 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 C4901_05460 f30b1f1d5ddcb184314ce5d1204d92ea 523 Gene3D G3DSA:3.50.50.60 7 287 8.9E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05460 f30b1f1d5ddcb184314ce5d1204d92ea 523 Gene3D G3DSA:3.30.410.40 133 211 8.9E-17 T 14-10-2018 C4901_05460 f30b1f1d5ddcb184314ce5d1204d92ea 523 SUPERFAMILY SSF51905 5 522 1.47E-58 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05460 f30b1f1d5ddcb184314ce5d1204d92ea 523 Gene3D G3DSA:3.50.50.60 429 522 5.3E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 233 244 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 SUPERFAMILY SSF56014 115 341 7.59E-34 T 14-10-2018 C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 SUPERFAMILY SSF55124 4 123 3.34E-43 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 Gene3D G3DSA:3.30.70.3340 1 121 5.7E-44 T 14-10-2018 C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 SUPERFAMILY SSF54862 165 246 2.42E-7 T 14-10-2018 C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 Gene3D G3DSA:3.30.413.10 122 341 2.1E-90 T 14-10-2018 C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 Gene3D G3DSA:3.30.70.20 188 248 2.1E-90 T 14-10-2018 C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 TIGRFAM TIGR02066 dsrB: sulfite reductase, dissimilatory-type beta subunit 22 354 1.3E-155 T 14-10-2018 IPR011808 Sulphite reductase, dissimilatory-type beta subunit GO:0006790|GO:0009055|GO:0018551|GO:0051539 KEGG: 00633+1.8.99.5|KEGG: 00920+1.8.99.5|MetaCyc: PWY-5306|MetaCyc: PWY-5360 C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 117 332 1.1E-24 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_06770 f51c54e512e18ed89ec6cf97bdd185f9 355 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 47 108 3.2E-9 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 SMART SM01005 230 354 2.6E-59 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 SUPERFAMILY SSF51419 9 231 2.29E-67 T 14-10-2018 IPR029066 PLP-binding barrel C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 30 40 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 TIGRFAM TIGR00492 alr: alanine racemase 3 351 5.7E-112 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 SUPERFAMILY SSF50621 223 353 9.07E-45 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 Hamap MF_01201 Alanine racemase. 1 354 34.601 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 Gene3D G3DSA:3.20.20.10 10 214 6.1E-123 T 14-10-2018 IPR029066 PLP-binding barrel C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 153 164 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 59 77 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 336 349 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 284 301 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 189 216 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 119 131 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 246 261 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 263 278 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 PRINTS PR00992 Alanine racemase signature 25 41 2.0E-66 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 Pfam PF00842 Alanine racemase, C-terminal domain 230 352 2.7E-41 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 Gene3D G3DSA:2.40.37.10 215 348 6.1E-123 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 C4901_08720 dc396d816a0e878df510ebf178f61ab5 355 Pfam PF01168 Alanine racemase, N-terminal domain 9 216 8.4E-66 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_00895 4c26cbb035cf776ae508d0b50320011d 553 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 8 440 1.2E-178 T 14-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 C4901_00895 4c26cbb035cf776ae508d0b50320011d 553 Gene3D G3DSA:1.10.510.10 275 400 6.3E-5 T 14-10-2018 C4901_00895 4c26cbb035cf776ae508d0b50320011d 553 Pfam PF03109 ABC1 family 113 229 1.0E-32 T 14-10-2018 IPR004147 UbiB domain C4901_00895 4c26cbb035cf776ae508d0b50320011d 553 SUPERFAMILY SSF56112 94 431 9.85E-47 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_14400 735a21d206baffe905043bf8fdb787de 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 76 191 1.0E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_14400 735a21d206baffe905043bf8fdb787de 235 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 6 223 36.065 T 14-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 C4901_14400 735a21d206baffe905043bf8fdb787de 235 Gene3D G3DSA:1.10.150.240 21 92 6.3E-62 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C4901_14400 735a21d206baffe905043bf8fdb787de 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 107 187 1.7E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_14400 735a21d206baffe905043bf8fdb787de 235 SUPERFAMILY SSF56784 7 222 8.01E-59 T 14-10-2018 IPR036412 HAD-like superfamily C4901_14400 735a21d206baffe905043bf8fdb787de 235 Gene3D G3DSA:3.40.50.1000 9 211 6.3E-62 T 14-10-2018 IPR023214 HAD superfamily C4901_14400 735a21d206baffe905043bf8fdb787de 235 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 212 3.4E-67 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 C4901_14400 735a21d206baffe905043bf8fdb787de 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.4E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_14400 735a21d206baffe905043bf8fdb787de 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.4E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_14400 735a21d206baffe905043bf8fdb787de 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.4E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_14400 735a21d206baffe905043bf8fdb787de 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 193 1.2E-34 T 14-10-2018 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 SUPERFAMILY SSF56712 1 609 6.41E-168 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 406 422 1.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 1.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 108 121 1.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 524 538 1.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 324 333 1.1E-24 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 Gene3D G3DSA:3.40.50.140 1 162 1.1E-51 T 14-10-2018 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 Gene3D G3DSA:1.10.460.10 168 605 1.2E-148 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 Pfam PF01131 DNA topoisomerase 161 594 6.0E-109 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 Gene3D G3DSA:2.70.20.10 220 491 1.2E-148 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 Pfam PF01751 Toprim domain 3 139 3.8E-13 T 14-10-2018 IPR006171 TOPRIM domain C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 Gene3D G3DSA:1.10.290.10 290 420 1.2E-148 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 625 1.6E-184 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 SMART SM00493 1 134 9.1E-18 T 14-10-2018 IPR006171 TOPRIM domain C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 SMART SM00436 134 226 6.7E-28 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 318 333 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 C4901_15305 879185cb782ad5e2d0aa476ed0089921 637 SMART SM00437 281 561 1.9E-58 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 359 376 3.9E-22 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 120 143 3.9E-22 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 320 335 3.9E-22 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 196 211 3.9E-22 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 11 35 3.9E-22 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 402 421 3.9E-22 T 14-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 322 647 1.2E-74 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 87 113 5.8E-74 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 281 301 5.8E-74 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 166 188 5.8E-74 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 317 336 5.8E-74 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 139 156 5.8E-74 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 251 271 5.8E-74 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 217 243 5.8E-74 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 301 317 5.8E-74 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12515 21df3c6f634abffb001fef0f429faf84 666 Pfam PF01578 Cytochrome C assembly protein 96 302 4.3E-43 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 C4901_08410 8d922043155b802a397222d19b4822f0 867 SMART SM01086 763 852 1.7E-36 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C4901_08410 8d922043155b802a397222d19b4822f0 867 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 763 843 3.0E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C4901_08410 8d922043155b802a397222d19b4822f0 867 SUPERFAMILY SSF52540 543 851 1.46E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08410 8d922043155b802a397222d19b4822f0 867 Pfam PF07724 AAA domain (Cdc48 subfamily) 593 757 4.3E-56 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_08410 8d922043155b802a397222d19b4822f0 867 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 628 646 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 C4901_08410 8d922043155b802a397222d19b4822f0 867 SMART SM00382 197 343 2.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_08410 8d922043155b802a397222d19b4822f0 867 SMART SM00382 594 745 5.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_08410 8d922043155b802a397222d19b4822f0 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 643 661 1.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C4901_08410 8d922043155b802a397222d19b4822f0 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 672 690 1.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C4901_08410 8d922043155b802a397222d19b4822f0 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 705 719 1.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C4901_08410 8d922043155b802a397222d19b4822f0 867 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 616 1.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C4901_08410 8d922043155b802a397222d19b4822f0 867 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 C4901_08410 8d922043155b802a397222d19b4822f0 867 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 852 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 C4901_08410 8d922043155b802a397222d19b4822f0 867 SUPERFAMILY SSF81923 4 154 1.18E-40 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C4901_08410 8d922043155b802a397222d19b4822f0 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 67 9.3E-13 T 14-10-2018 IPR004176 Clp, N-terminal C4901_08410 8d922043155b802a397222d19b4822f0 867 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 143 2.6E-10 T 14-10-2018 IPR004176 Clp, N-terminal C4901_08410 8d922043155b802a397222d19b4822f0 867 Gene3D G3DSA:1.10.1780.10 1 146 8.0E-34 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C4901_08410 8d922043155b802a397222d19b4822f0 867 Gene3D G3DSA:3.40.50.300 147 341 8.6E-73 T 14-10-2018 C4901_08410 8d922043155b802a397222d19b4822f0 867 Gene3D G3DSA:3.40.50.300 547 761 1.1E-89 T 14-10-2018 C4901_08410 8d922043155b802a397222d19b4822f0 867 Gene3D G3DSA:3.40.50.300 342 541 1.8E-68 T 14-10-2018 C4901_08410 8d922043155b802a397222d19b4822f0 867 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 3.1E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_08410 8d922043155b802a397222d19b4822f0 867 Gene3D G3DSA:1.10.8.60 763 858 1.6E-27 T 14-10-2018 C4901_08410 8d922043155b802a397222d19b4822f0 867 SUPERFAMILY SSF52540 159 522 3.25E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13580 07891e270db9d4623bf2e36f5eed5f1f 112 Pfam PF13276 HTH-like domain 45 100 1.5E-14 T 14-10-2018 IPR025948 HTH-like domain C4901_05670 07891e270db9d4623bf2e36f5eed5f1f 112 Pfam PF13276 HTH-like domain 45 100 1.5E-14 T 14-10-2018 IPR025948 HTH-like domain C4901_13350 e8ea4b0d00b174001ae26e239d5e6008 752 SMART SM01008 26 129 2.1E-12 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead C4901_13350 e8ea4b0d00b174001ae26e239d5e6008 752 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 27 126 5.8E-10 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead C4901_13350 e8ea4b0d00b174001ae26e239d5e6008 752 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 150 688 1.8E-145 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 C4901_13350 e8ea4b0d00b174001ae26e239d5e6008 752 SUPERFAMILY SSF54665 17 126 4.58E-20 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily C4901_13350 e8ea4b0d00b174001ae26e239d5e6008 752 Gene3D G3DSA:3.30.365.10 8 751 2.4E-199 T 14-10-2018 C4901_13350 e8ea4b0d00b174001ae26e239d5e6008 752 SUPERFAMILY SSF56003 137 749 1.44E-159 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 C4901_04210 863c9fb63d158ff4464478d47fa6bb8f 345 SUPERFAMILY SSF46785 31 73 2.01E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_04210 863c9fb63d158ff4464478d47fa6bb8f 345 Gene3D G3DSA:1.10.10.10 8 88 4.0E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_04210 863c9fb63d158ff4464478d47fa6bb8f 345 Gene3D G3DSA:3.30.565.10 89 190 4.0E-6 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_04210 863c9fb63d158ff4464478d47fa6bb8f 345 Pfam PF14213 STAS-like domain of unknown function (DUF4325) 278 331 3.9E-11 T 14-10-2018 IPR025474 Domain of unknown function DUF4325 C4901_04210 863c9fb63d158ff4464478d47fa6bb8f 345 SUPERFAMILY SSF55874 111 233 3.41E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_09390 708ac5f11573007a2359a0d3d76b9e86 267 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_09390 708ac5f11573007a2359a0d3d76b9e86 267 Pfam PF00005 ABC transporter 21 163 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_09390 708ac5f11573007a2359a0d3d76b9e86 267 SMART SM00382 29 213 8.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_09390 708ac5f11573007a2359a0d3d76b9e86 267 Gene3D G3DSA:3.40.50.300 1 243 2.2E-69 T 14-10-2018 C4901_09390 708ac5f11573007a2359a0d3d76b9e86 267 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 11 233 8.3E-95 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 C4901_09390 708ac5f11573007a2359a0d3d76b9e86 267 SUPERFAMILY SSF52540 3 227 6.58E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15575 30b2d3ad3575f2b4ec61261efe924c40 416 PIRSF PIRSF038885 1 416 3.8E-130 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 C4901_15575 30b2d3ad3575f2b4ec61261efe924c40 416 Gene3D G3DSA:1.20.810.10 1 416 5.5E-133 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 C4901_15575 30b2d3ad3575f2b4ec61261efe924c40 416 SUPERFAMILY SSF81648 309 404 3.27E-20 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C4901_15575 30b2d3ad3575f2b4ec61261efe924c40 416 SUPERFAMILY SSF81342 15 268 4.55E-80 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C4901_15575 30b2d3ad3575f2b4ec61261efe924c40 416 Pfam PF00033 Cytochrome b/b6/petB 24 212 2.3E-56 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C4901_15575 30b2d3ad3575f2b4ec61261efe924c40 416 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 279 306 1.6E-5 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C4901_15575 30b2d3ad3575f2b4ec61261efe924c40 416 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 308 391 3.1E-22 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 104 190 6.6E-28 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 Pfam PF01386 Ribosomal L25p family 7 95 5.2E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 7 176 3.4E-39 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 SUPERFAMILY SSF50715 5 198 1.43E-50 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 Gene3D G3DSA:2.40.240.10 4 98 4.1E-28 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 Gene3D G3DSA:2.170.120.20 101 199 3.7E-24 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 192 30.15 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 5 98 21.797 T 14-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 C4901_02425 9f4dfdc033c44dc5cc20bad2f96b171f 220 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 12 98 6.0E-23 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 Pfam PF04408 Helicase associated domain (HA2) 394 475 3.7E-6 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 SMART SM00487 6 192 2.2E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 SUPERFAMILY SSF52540 19 344 3.08E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 Gene3D G3DSA:3.40.50.300 6 185 2.8E-52 T 14-10-2018 C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 Pfam PF00270 DEAD/DEAH box helicase 24 167 3.4E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 Gene3D G3DSA:3.40.50.300 186 348 4.3E-38 T 14-10-2018 C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 SMART SM00490 236 333 3.9E-8 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 9 822 1.8E-218 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 Pfam PF08482 ATP-dependent helicase C-terminal 677 810 5.3E-36 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 Pfam PF00271 Helicase conserved C-terminal domain 215 332 9.4E-9 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 124 133 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 SMART SM00847 393 481 0.0036 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 C4901_01095 3ce8752585a1258d5442cbdf7cc057ea 823 PIRSF PIRSF005496 5 823 1.3E-235 T 14-10-2018 C4901_04840 091e3fd307d339ed3ab7c397f1b497ba 437 Gene3D G3DSA:2.40.160.10 47 334 2.8E-6 T 14-10-2018 IPR023614 Porin domain superfamily C4901_04840 091e3fd307d339ed3ab7c397f1b497ba 437 SUPERFAMILY SSF56935 60 429 2.24E-14 T 14-10-2018 C4901_05295 3d1b2e1614690b0273bd048086a94995 598 Pfam PF00990 Diguanylate cyclase, GGDEF domain 173 329 2.6E-43 T 14-10-2018 IPR000160 GGDEF domain C4901_05295 3d1b2e1614690b0273bd048086a94995 598 SUPERFAMILY SSF141868 353 592 1.18E-73 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05295 3d1b2e1614690b0273bd048086a94995 598 Pfam PF13185 GAF domain 22 161 3.7E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_05295 3d1b2e1614690b0273bd048086a94995 598 Pfam PF00563 EAL domain 354 586 2.5E-69 T 14-10-2018 IPR001633 EAL domain C4901_05295 3d1b2e1614690b0273bd048086a94995 598 SUPERFAMILY SSF55781 22 173 3.93E-19 T 14-10-2018 C4901_05295 3d1b2e1614690b0273bd048086a94995 598 SMART SM00052 344 591 1.4E-84 T 14-10-2018 IPR001633 EAL domain C4901_05295 3d1b2e1614690b0273bd048086a94995 598 SMART SM00267 162 334 6.5E-49 T 14-10-2018 IPR000160 GGDEF domain C4901_05295 3d1b2e1614690b0273bd048086a94995 598 Gene3D G3DSA:3.20.20.450 347 595 3.9E-81 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05295 3d1b2e1614690b0273bd048086a94995 598 Gene3D G3DSA:3.30.450.40 11 170 7.5E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_05295 3d1b2e1614690b0273bd048086a94995 598 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 170 329 1.2E-37 T 14-10-2018 IPR000160 GGDEF domain C4901_05295 3d1b2e1614690b0273bd048086a94995 598 SUPERFAMILY SSF55073 178 334 4.16E-42 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_05295 3d1b2e1614690b0273bd048086a94995 598 Gene3D G3DSA:3.30.70.270 171 346 9.6E-50 T 14-10-2018 C4901_05295 3d1b2e1614690b0273bd048086a94995 598 SMART SM00065 22 170 2.9E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_08735 24cc87b867c01f552d90b19811af69d5 290 Gene3D G3DSA:1.10.3720.10 57 284 3.4E-33 T 14-10-2018 IPR035906 MetI-like superfamily C4901_08735 24cc87b867c01f552d90b19811af69d5 290 SUPERFAMILY SSF161098 26 273 4.58E-35 T 14-10-2018 IPR035906 MetI-like superfamily C4901_08735 24cc87b867c01f552d90b19811af69d5 290 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 21 282 8.3E-71 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 C4901_08735 24cc87b867c01f552d90b19811af69d5 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 283 2.1E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C4901_16450 238409c12a61c3328820e29946650b89 270 PRINTS PR00721 Stomatin signature 108 125 2.0E-54 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_16450 238409c12a61c3328820e29946650b89 270 PRINTS PR00721 Stomatin signature 128 151 2.0E-54 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_16450 238409c12a61c3328820e29946650b89 270 PRINTS PR00721 Stomatin signature 171 192 2.0E-54 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_16450 238409c12a61c3328820e29946650b89 270 PRINTS PR00721 Stomatin signature 196 219 2.0E-54 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_16450 238409c12a61c3328820e29946650b89 270 PRINTS PR00721 Stomatin signature 152 170 2.0E-54 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_16450 238409c12a61c3328820e29946650b89 270 PRINTS PR00721 Stomatin signature 26 48 2.0E-54 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_16450 238409c12a61c3328820e29946650b89 270 PRINTS PR00721 Stomatin signature 73 94 2.0E-54 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_16450 238409c12a61c3328820e29946650b89 270 Pfam PF01145 SPFH domain / Band 7 family 23 192 2.4E-32 T 14-10-2018 IPR001107 Band 7 domain C4901_16450 238409c12a61c3328820e29946650b89 270 SMART SM00244 19 176 3.0E-54 T 14-10-2018 IPR001107 Band 7 domain C4901_16450 238409c12a61c3328820e29946650b89 270 Gene3D G3DSA:3.30.479.30 47 178 3.1E-43 T 14-10-2018 C4901_16450 238409c12a61c3328820e29946650b89 270 SUPERFAMILY SSF117892 50 183 1.06E-41 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily C4901_11765 b2cffee08c7a3b340b5fa5b90e30a537 319 SUPERFAMILY SSF51735 4 308 2.59E-89 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_11765 b2cffee08c7a3b340b5fa5b90e30a537 319 Gene3D G3DSA:3.90.25.10 175 307 3.8E-94 T 14-10-2018 C4901_11765 b2cffee08c7a3b340b5fa5b90e30a537 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 244 5.7E-61 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C4901_11765 b2cffee08c7a3b340b5fa5b90e30a537 319 Gene3D G3DSA:3.40.50.720 9 298 3.8E-94 T 14-10-2018 C4901_11765 b2cffee08c7a3b340b5fa5b90e30a537 319 PRINTS PR01713 Nucleotide sugar epimerase signature 215 230 7.8E-7 T 14-10-2018 C4901_11765 b2cffee08c7a3b340b5fa5b90e30a537 319 PRINTS PR01713 Nucleotide sugar epimerase signature 277 294 7.8E-7 T 14-10-2018 C4901_16930 d01685e434d04054e66d88679fd505fc 707 Gene3D G3DSA:1.10.486.10 379 533 3.0E-125 T 14-10-2018 C4901_16930 d01685e434d04054e66d88679fd505fc 707 Gene3D G3DSA:3.40.50.300 9 270 2.4E-91 T 14-10-2018 C4901_16930 d01685e434d04054e66d88679fd505fc 707 Gene3D G3DSA:1.10.10.160 112 185 2.4E-91 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily C4901_16930 d01685e434d04054e66d88679fd505fc 707 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 268 9.1E-69 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C4901_16930 d01685e434d04054e66d88679fd505fc 707 SUPERFAMILY SSF52540 4 637 1.77E-177 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16930 d01685e434d04054e66d88679fd505fc 707 Gene3D G3DSA:3.40.50.300 278 631 3.0E-125 T 14-10-2018 C4901_16930 d01685e434d04054e66d88679fd505fc 707 Pfam PF13361 UvrD-like helicase C-terminal domain 274 433 2.4E-35 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C4901_16930 d01685e434d04054e66d88679fd505fc 707 Pfam PF13361 UvrD-like helicase C-terminal domain 497 611 4.6E-31 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C4901_13185 677c15409255da2af9c729671c028057 151 Pfam PF08334 Type II secretion system (T2SS), protein G 38 126 3.0E-29 T 14-10-2018 IPR013545 Type II secretion system protein G C4901_13185 677c15409255da2af9c729671c028057 151 SUPERFAMILY SSF54523 40 126 9.42E-28 T 14-10-2018 C4901_13185 677c15409255da2af9c729671c028057 151 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_13185 677c15409255da2af9c729671c028057 151 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 12 126 3.2E-37 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 C4901_13185 677c15409255da2af9c729671c028057 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 1.2E-13 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C4901_13185 677c15409255da2af9c729671c028057 151 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 1.2E-13 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C4901_13185 677c15409255da2af9c729671c028057 151 Gene3D G3DSA:3.30.700.10 27 135 1.4E-24 T 14-10-2018 C4901_13185 677c15409255da2af9c729671c028057 151 Pfam PF07963 Prokaryotic N-terminal methylation motif 10 32 5.9E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_13185 677c15409255da2af9c729671c028057 151 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 7.7E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_05815 eee930c69edf0d85eb09e936870507f8 638 Gene3D G3DSA:1.10.4030.30 50 165 1.1E-5 T 14-10-2018 C4901_05815 eee930c69edf0d85eb09e936870507f8 638 Pfam PF13624 SurA N-terminal domain 1 160 1.3E-35 T 14-10-2018 C4901_05815 eee930c69edf0d85eb09e936870507f8 638 SUPERFAMILY SSF109998 46 238 2.86E-19 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C4901_05815 eee930c69edf0d85eb09e936870507f8 638 Gene3D G3DSA:3.10.50.40 263 396 6.5E-27 T 14-10-2018 C4901_05815 eee930c69edf0d85eb09e936870507f8 638 Pfam PF00639 PPIC-type PPIASE domain 275 368 3.7E-18 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 C4901_05815 eee930c69edf0d85eb09e936870507f8 638 SUPERFAMILY SSF54534 265 373 1.44E-23 T 14-10-2018 C4901_05815 eee930c69edf0d85eb09e936870507f8 638 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 309 330 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 C4901_09315 efb601095b6dc57656136b1788663cfe 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 106 3.9E-5 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 C4901_09315 efb601095b6dc57656136b1788663cfe 116 Gene3D G3DSA:2.30.30.110 20 110 9.1E-6 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor C4901_09315 efb601095b6dc57656136b1788663cfe 116 SUPERFAMILY SSF50118 6 108 2.18E-9 T 14-10-2018 C4901_10640 697878b792f1473cf4658b27d171389f 369 SUPERFAMILY SSF47384 149 215 2.94E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_10640 697878b792f1473cf4658b27d171389f 369 SUPERFAMILY SSF55874 218 366 1.06E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_10640 697878b792f1473cf4658b27d171389f 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 366 3.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_10640 697878b792f1473cf4658b27d171389f 369 SMART SM00387 259 369 1.5E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_10640 697878b792f1473cf4658b27d171389f 369 Gene3D G3DSA:1.10.287.130 159 217 5.7E-34 T 14-10-2018 C4901_10640 697878b792f1473cf4658b27d171389f 369 Gene3D G3DSA:3.30.565.10 218 365 5.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_10640 697878b792f1473cf4658b27d171389f 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 348 2.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_10640 697878b792f1473cf4658b27d171389f 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 315 2.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_10640 697878b792f1473cf4658b27d171389f 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 319 329 2.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_01785 fd2842fad9af2b8aefd0dfa635281eeb 286 SUPERFAMILY SSF52540 5 266 9.61E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01785 fd2842fad9af2b8aefd0dfa635281eeb 286 Pfam PF13401 AAA domain 42 173 8.4E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01785 fd2842fad9af2b8aefd0dfa635281eeb 286 Gene3D G3DSA:3.40.50.300 25 188 4.7E-15 T 14-10-2018 C4901_11095 3ed347ed70eb9967ee7c90f7f07d2abb 118 Pfam PF05717 IS66 Orf2 like protein 9 106 2.7E-37 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_16395 67c5bcf15f96edc4dc4f44ac49f7b3c4 385 Gene3D G3DSA:1.20.140.10 240 375 2.4E-8 T 14-10-2018 C4901_16395 67c5bcf15f96edc4dc4f44ac49f7b3c4 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 240 357 2.7E-6 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 C4901_16395 67c5bcf15f96edc4dc4f44ac49f7b3c4 385 SUPERFAMILY SSF56645 23 230 4.06E-34 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 C4901_16395 67c5bcf15f96edc4dc4f44ac49f7b3c4 385 SUPERFAMILY SSF47203 242 364 4.99E-7 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 C4901_16395 67c5bcf15f96edc4dc4f44ac49f7b3c4 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 24 126 3.2E-8 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 C4901_16395 67c5bcf15f96edc4dc4f44ac49f7b3c4 385 Gene3D G3DSA:1.10.540.10 24 127 2.9E-11 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 C4901_16395 67c5bcf15f96edc4dc4f44ac49f7b3c4 385 Gene3D G3DSA:2.40.110.10 140 238 1.7E-9 T 14-10-2018 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 Gene3D G3DSA:1.25.40.10 82 276 1.4E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SMART SM00028 464 497 270.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SMART SM00028 329 362 1.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SMART SM00028 228 261 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SMART SM00028 498 532 65.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SMART SM00028 566 599 73.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SMART SM00028 87 120 380.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 Pfam PF13432 Tetratricopeptide repeat 333 388 1.4E-4 T 14-10-2018 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 Pfam PF13432 Tetratricopeptide repeat 468 533 3.0E-4 T 14-10-2018 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 Gene3D G3DSA:1.25.40.10 277 391 4.1E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SUPERFAMILY SSF48452 192 426 1.17E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 Gene3D G3DSA:1.25.40.10 392 611 4.0E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SUPERFAMILY SSF48452 440 599 8.35E-20 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_02400 5dd075f588ec3e1c4c9c22e708674dbf 612 SUPERFAMILY SSF48452 81 183 2.1E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 Gene3D G3DSA:3.30.590.10 104 456 3.3E-145 T 14-10-2018 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 467 2.8E-205 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 SUPERFAMILY SSF55931 101 467 5.79E-137 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 ProSitePatterns PS00180 Glutamine synthetase signature 1. 49 67 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 258 273 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 Gene3D G3DSA:3.10.20.70 2 103 9.9E-41 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 SMART SM01230 101 378 4.1E-148 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 13 94 3.1E-32 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 SUPERFAMILY SSF54368 3 98 7.06E-37 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_01205 25a0712b78b0beea2d17ebc7a0ed95de 468 Pfam PF00120 Glutamine synthetase, catalytic domain 102 465 3.8E-137 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_16585 bea2a646ae6d743b3bcd4656fe283fbd 88 PRINTS PR00606 Class ID cytochrome C signature 57 67 1.8E-8 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_16585 bea2a646ae6d743b3bcd4656fe283fbd 88 PRINTS PR00606 Class ID cytochrome C signature 15 28 1.8E-8 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_16585 bea2a646ae6d743b3bcd4656fe283fbd 88 PRINTS PR00606 Class ID cytochrome C signature 69 79 1.8E-8 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_16585 bea2a646ae6d743b3bcd4656fe283fbd 88 PRINTS PR00606 Class ID cytochrome C signature 38 51 1.8E-8 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_16585 bea2a646ae6d743b3bcd4656fe283fbd 88 SUPERFAMILY SSF46626 4 80 6.66E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_16585 bea2a646ae6d743b3bcd4656fe283fbd 88 Gene3D G3DSA:1.10.760.10 1 81 1.2E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_14600 7e285f062e5320a94febfd74f798d5af 356 Pfam PF00437 Type II/IV secretion system protein 12 265 3.0E-48 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_14600 7e285f062e5320a94febfd74f798d5af 356 SUPERFAMILY SSF52540 5 334 3.09E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14600 7e285f062e5320a94febfd74f798d5af 356 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_14600 7e285f062e5320a94febfd74f798d5af 356 Gene3D G3DSA:3.30.450.90 1 100 1.5E-34 T 14-10-2018 C4901_14600 7e285f062e5320a94febfd74f798d5af 356 SMART SM00382 122 256 5.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_14600 7e285f062e5320a94febfd74f798d5af 356 Gene3D G3DSA:3.40.50.300 101 354 5.4E-106 T 14-10-2018 C4901_14600 7e285f062e5320a94febfd74f798d5af 356 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 341 7.5E-154 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C4901_01710 8c83ceca810b9d0d6cb954f528503fcd 218 Gene3D G3DSA:3.30.70.260 125 196 5.6E-74 T 14-10-2018 C4901_01710 8c83ceca810b9d0d6cb954f528503fcd 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 3.8E-56 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C4901_01710 8c83ceca810b9d0d6cb954f528503fcd 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 3.6E-64 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C4901_01710 8c83ceca810b9d0d6cb954f528503fcd 218 SUPERFAMILY SSF75445 127 198 2.75E-23 T 14-10-2018 C4901_01710 8c83ceca810b9d0d6cb954f528503fcd 218 SUPERFAMILY SSF100950 1 147 8.37E-44 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C4901_01710 8c83ceca810b9d0d6cb954f528503fcd 218 Gene3D G3DSA:3.40.50.1360 7 207 5.6E-74 T 14-10-2018 C4901_01710 8c83ceca810b9d0d6cb954f528503fcd 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.46 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 ProSitePatterns PS00622 LuxR-type HTH domain signature. 250 277 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 266 278 6.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 250 266 6.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 236 250 6.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 SMART SM00421 233 290 4.2E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 Gene3D G3DSA:1.10.10.10 234 296 6.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 SUPERFAMILY SSF46894 234 295 1.67E-14 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 Gene3D G3DSA:3.30.450.40 41 227 6.6E-40 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 SUPERFAMILY SSF55781 107 228 2.94E-5 T 14-10-2018 C4901_12645 ce9c709e32e6d7e3b6e6c77f290e567d 296 Pfam PF00196 Bacterial regulatory proteins, luxR family 237 288 3.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 SMART SM00357 3 67 1.2E-29 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 PRINTS PR00050 Cold shock protein signature 4 19 1.2E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 PRINTS PR00050 Cold shock protein signature 25 34 1.2E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 PRINTS PR00050 Cold shock protein signature 40 58 1.2E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 PIRSF PIRSF002599 1 67 1.3E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 SUPERFAMILY SSF50249 1 66 2.79E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 Gene3D G3DSA:2.40.50.140 1 65 6.8E-30 T 14-10-2018 C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.2E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_07000 7a954b5870b35dc1e64e64463067dd2e 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site C4901_13420 0b52916955cfe8059c9d7c6d6e468112 143 SUPERFAMILY SSF53927 11 138 4.7E-38 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C4901_13420 0b52916955cfe8059c9d7c6d6e468112 143 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 12 138 2.2E-36 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 C4901_13420 0b52916955cfe8059c9d7c6d6e468112 143 Gene3D G3DSA:3.40.140.10 9 142 7.8E-40 T 14-10-2018 C4901_13420 0b52916955cfe8059c9d7c6d6e468112 143 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 12 113 4.9E-12 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain C4901_00405 516c48e833d03388d0029d544a0be5ae 318 Gene3D G3DSA:3.30.470.10 2 130 5.1E-41 T 14-10-2018 C4901_00405 516c48e833d03388d0029d544a0be5ae 318 SUPERFAMILY SSF56752 1 303 1.44E-104 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 C4901_00405 516c48e833d03388d0029d544a0be5ae 318 Gene3D G3DSA:3.20.10.10 131 303 5.9E-53 T 14-10-2018 C4901_00405 516c48e833d03388d0029d544a0be5ae 318 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 222 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 C4901_00405 516c48e833d03388d0029d544a0be5ae 318 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 11 306 2.7E-131 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 C4901_00405 516c48e833d03388d0029d544a0be5ae 318 Pfam PF01063 Amino-transferase class IV 36 266 4.5E-54 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 C4901_02990 ee26ee064706d8299c3193735953d27e 477 PIRSF PIRSF000774 1 477 1.3E-151 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 49 9.9E-17 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 Pfam PF04552 Sigma-54, DNA binding domain 318 474 1.0E-67 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding C4901_02990 ee26ee064706d8299c3193735953d27e 477 PRINTS PR00045 Sigma-54 factor signature 185 202 1.2E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 PRINTS PR00045 Sigma-54 factor signature 392 403 1.2E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 PRINTS PR00045 Sigma-54 factor signature 376 388 1.2E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 PRINTS PR00045 Sigma-54 factor signature 450 468 1.2E-31 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 474 3.7E-141 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 C4901_02990 ee26ee064706d8299c3193735953d27e 477 Pfam PF04963 Sigma-54 factor, core binding domain 109 303 4.3E-52 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 C4901_02990 ee26ee064706d8299c3193735953d27e 477 Gene3D G3DSA:1.10.10.1330 116 248 1.6E-20 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily C4901_02990 ee26ee064706d8299c3193735953d27e 477 Gene3D G3DSA:1.10.10.60 417 474 7.7E-23 T 14-10-2018 C4901_14545 e893f539dcd38f4090e0e934290a0776 321 SUPERFAMILY SSF52440 4 123 2.5E-38 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_14545 e893f539dcd38f4090e0e934290a0776 321 Gene3D G3DSA:3.30.1490.20 138 202 1.5E-112 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_14545 e893f539dcd38f4090e0e934290a0776 321 Hamap MF_00162 Glutathione synthetase [gshB]. 1 317 155.862 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C4901_14545 e893f539dcd38f4090e0e934290a0776 321 TIGRFAM TIGR01380 glut_syn: glutathione synthase 4 313 1.8E-128 T 14-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C4901_14545 e893f539dcd38f4090e0e934290a0776 321 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 5 121 2.0E-40 T 14-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C4901_14545 e893f539dcd38f4090e0e934290a0776 321 Gene3D G3DSA:3.30.470.20 116 296 1.5E-112 T 14-10-2018 C4901_14545 e893f539dcd38f4090e0e934290a0776 321 SUPERFAMILY SSF56059 124 313 2.7E-56 T 14-10-2018 C4901_14545 e893f539dcd38f4090e0e934290a0776 321 Gene3D G3DSA:3.40.50.20 8 115 1.5E-112 T 14-10-2018 C4901_14545 e893f539dcd38f4090e0e934290a0776 321 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 125 297 9.0E-76 T 14-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 C4901_08950 620c7584ea6afeed29dc318be5d45137 446 SUPERFAMILY SSF103473 36 425 3.4E-34 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_08950 620c7584ea6afeed29dc318be5d45137 446 Gene3D G3DSA:1.20.1250.20 28 210 5.5E-11 T 14-10-2018 C4901_08950 620c7584ea6afeed29dc318be5d45137 446 Gene3D G3DSA:1.20.1250.20 235 436 2.4E-14 T 14-10-2018 C4901_08950 620c7584ea6afeed29dc318be5d45137 446 Pfam PF07690 Major Facilitator Superfamily 238 404 1.0E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_14550 61c3e51ee4e81ff9b571302c1d571095 289 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 204 256 1.3E-8 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 C4901_14550 61c3e51ee4e81ff9b571302c1d571095 289 Gene3D G3DSA:3.30.1150.10 141 268 2.0E-13 T 14-10-2018 C4901_14550 61c3e51ee4e81ff9b571302c1d571095 289 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 197 260 1.8E-11 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C4901_14550 61c3e51ee4e81ff9b571302c1d571095 289 SUPERFAMILY SSF74653 173 274 1.83E-13 T 14-10-2018 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:2.40.50.100 725 799 2.9E-30 T 14-10-2018 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:2.40.270.10 1057 1263 5.3E-87 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:3.90.1100.10 642 724 1.9E-21 T 14-10-2018 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:3.90.1100.10 18 174 7.1E-53 T 14-10-2018 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Pfam PF04561 RNA polymerase Rpb2, domain 2 177 229 5.0E-7 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Pfam PF04561 RNA polymerase Rpb2, domain 2 370 465 3.1E-15 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1363 12.446 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 SUPERFAMILY SSF64484 12 1361 0.0 T 14-10-2018 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Pfam PF00562 RNA polymerase Rpb2, domain 6 729 1285 4.5E-163 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Pfam PF04563 RNA polymerase beta subunit 26 510 1.3E-39 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:3.90.1100.10 453 639 1.9E-71 T 14-10-2018 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Pfam PF04565 RNA polymerase Rpb2, domain 3 524 591 2.3E-31 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:2.40.50.150 845 968 1.0E-44 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Pfam PF10385 RNA polymerase beta subunit external 1 domain 602 667 7.3E-24 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:2.40.270.10 801 844 8.0E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1087 1099 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:3.90.1800.10 1273 1326 3.0E-11 T 14-10-2018 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Pfam PF04560 RNA polymerase Rpb2, domain 7 1287 1361 1.3E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 9 1360 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14160 2bdbe0000bbfde71803fef80c1f5a724 1363 Gene3D G3DSA:3.90.1110.10 327 452 3.1E-34 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_05630 8d6d50a3a7626df63078d91abe8aa8c6 790 SUPERFAMILY SSF48208 244 678 8.84E-66 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 C4901_05630 8d6d50a3a7626df63078d91abe8aa8c6 790 SUPERFAMILY SSF74650 4 263 2.98E-48 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 C4901_05630 8d6d50a3a7626df63078d91abe8aa8c6 790 Pfam PF09137 Glucodextranase, domain N 6 263 6.9E-63 T 14-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 C4901_05630 8d6d50a3a7626df63078d91abe8aa8c6 790 Gene3D G3DSA:2.70.98.10 1 263 2.0E-61 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 C4901_05630 8d6d50a3a7626df63078d91abe8aa8c6 790 Pfam PF00723 Glycosyl hydrolases family 15 368 676 1.5E-9 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 C4901_05630 8d6d50a3a7626df63078d91abe8aa8c6 790 Pfam PF00723 Glycosyl hydrolases family 15 281 348 9.8E-7 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 C4901_05630 8d6d50a3a7626df63078d91abe8aa8c6 790 Gene3D G3DSA:1.50.10.10 273 699 6.1E-140 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 Pfam PF07669 Eco57I restriction-modification methylase 124 233 9.6E-11 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 Gene3D G3DSA:3.40.50.150 7 251 5.9E-36 T 14-10-2018 C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 125 137 3.5E-16 T 14-10-2018 C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 34 48 3.5E-16 T 14-10-2018 C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 5 21 3.5E-16 T 14-10-2018 C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 160 184 3.5E-16 T 14-10-2018 C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 Pfam PF12950 TaqI-like C-terminal specificity domain 379 491 2.7E-10 T 14-10-2018 IPR025931 TaqI-like C-terminal specificity domain C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 128 134 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C4901_12365 0d32e6dccc8f59ddf1a7f65b27bca406 554 SUPERFAMILY SSF53335 4 239 1.21E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_08715 afb51164d9d0497d1453f5da22062b19 450 Gene3D G3DSA:3.40.50.300 167 445 3.7E-107 T 14-10-2018 C4901_08715 afb51164d9d0497d1453f5da22062b19 450 Pfam PF03796 DnaB-like helicase C terminal domain 184 438 1.6E-117 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 C4901_08715 afb51164d9d0497d1453f5da22062b19 450 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 8 440 4.4E-173 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 C4901_08715 afb51164d9d0497d1453f5da22062b19 450 Pfam PF00772 DnaB-like helicase N terminal domain 8 108 1.9E-31 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 C4901_08715 afb51164d9d0497d1453f5da22062b19 450 SMART SM00382 201 398 0.0022 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_08715 afb51164d9d0497d1453f5da22062b19 450 Gene3D G3DSA:1.10.860.10 4 165 1.8E-49 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal C4901_08715 afb51164d9d0497d1453f5da22062b19 450 SUPERFAMILY SSF52540 182 431 5.42E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08715 afb51164d9d0497d1453f5da22062b19 450 SUPERFAMILY SSF48024 6 117 1.83E-33 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 C4901_01895 46b94fb1e26fec5064994fddc8336f56 219 SUPERFAMILY SSF52540 1 217 3.41E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01895 46b94fb1e26fec5064994fddc8336f56 219 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 1.6E-85 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 C4901_01895 46b94fb1e26fec5064994fddc8336f56 219 SMART SM00382 27 212 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01895 46b94fb1e26fec5064994fddc8336f56 219 Gene3D G3DSA:3.40.50.300 1 219 1.7E-61 T 14-10-2018 C4901_01895 46b94fb1e26fec5064994fddc8336f56 219 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_01895 46b94fb1e26fec5064994fddc8336f56 219 Pfam PF00005 ABC transporter 18 165 1.8E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Gene3D G3DSA:3.40.50.740 76 561 1.8E-183 T 14-10-2018 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Pfam PF00384 Molybdopterin oxidoreductase 66 494 6.0E-82 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Pfam PF04324 BFD-like [2Fe-2S] binding domain 863 912 3.8E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Gene3D G3DSA:1.10.10.1100 863 916 1.2E-11 T 14-10-2018 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 15 33 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 SMART SM00926 10 64 1.7E-19 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 440 457 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Pfam PF01568 Molydopterin dinucleotide binding domain 606 716 1.4E-32 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Gene3D G3DSA:3.40.228.10 146 347 1.8E-183 T 14-10-2018 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Gene3D G3DSA:2.40.40.20 595 723 1.9E-40 T 14-10-2018 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 SUPERFAMILY SSF50692 571 723 2.03E-46 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Gene3D G3DSA:2.20.25.90 7 65 7.7E-18 T 14-10-2018 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 SUPERFAMILY SSF53706 8 550 3.93E-189 T 14-10-2018 C4901_16560 377889f98de58dfacb71ce3794db5c7d 918 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 12 63 7.1E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_03540 1aa789bb16b571b61205ee9baaa353c9 79 SMART SM00834 3 41 0.001 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C4901_03540 1aa789bb16b571b61205ee9baaa353c9 79 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 3 47 9.9E-10 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C4901_09005 e4f58dc8ad514b5f8dc1ea56ec819cfa 450 SUPERFAMILY SSF109604 21 442 2.57E-63 T 14-10-2018 C4901_09005 e4f58dc8ad514b5f8dc1ea56ec819cfa 450 Pfam PF01966 HD domain 62 144 5.2E-5 T 14-10-2018 IPR006674 HD domain C4901_09005 e4f58dc8ad514b5f8dc1ea56ec819cfa 450 Gene3D G3DSA:1.10.3410.10 241 355 7.2E-141 T 14-10-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily KEGG: 00230+3.1.5.1 C4901_09005 e4f58dc8ad514b5f8dc1ea56ec819cfa 450 Gene3D G3DSA:1.10.3550.10 118 444 7.2E-141 T 14-10-2018 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal C4901_09005 e4f58dc8ad514b5f8dc1ea56ec819cfa 450 Pfam PF13286 Phosphohydrolase-associated domain 343 441 1.3E-5 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain C4901_09005 e4f58dc8ad514b5f8dc1ea56ec819cfa 450 Gene3D G3DSA:1.10.3210.10 1 240 7.2E-141 T 14-10-2018 C4901_09005 e4f58dc8ad514b5f8dc1ea56ec819cfa 450 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 25 443 7.5E-101 T 14-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 C4901_09005 e4f58dc8ad514b5f8dc1ea56ec819cfa 450 SMART SM00471 58 262 5.0E-6 T 14-10-2018 IPR003607 HD/PDEase domain C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 ProSitePatterns PS00692 NifH/frxC family signature 2. 126 139 - T 14-10-2018 IPR030655 NifH/chlL conserved site C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 PIRSF PIRSF000363 3 279 7.9E-119 T 14-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 SUPERFAMILY SSF52540 5 281 4.17E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 TIGRFAM TIGR01287 nifH: nitrogenase iron protein 5 278 1.3E-137 T 14-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 ProSitePatterns PS00746 NifH/frxC family signature 1. 89 101 - T 14-10-2018 IPR030655 NifH/chlL conserved site C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 Hamap MF_00533 Nitrogenase iron protein [nifH]. 4 277 51.654 T 14-10-2018 IPR005977 Nitrogenase iron protein NifH GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 Gene3D G3DSA:3.40.50.300 3 278 1.2E-67 T 14-10-2018 C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 Pfam PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family 5 276 1.4E-133 T 14-10-2018 IPR000392 NifH/frxC family GO:0005524|GO:0016491|GO:0055114 C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 PRINTS PR00091 Nitrogenase component II signature 125 140 9.3E-38 T 14-10-2018 C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 PRINTS PR00091 Nitrogenase component II signature 10 23 9.3E-38 T 14-10-2018 C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 PRINTS PR00091 Nitrogenase component II signature 87 101 9.3E-38 T 14-10-2018 C4901_14750 7dd7d56d97a1b7edef4ac16d1c11682e 294 PRINTS PR00091 Nitrogenase component II signature 32 47 9.3E-38 T 14-10-2018 C4901_02295 05f29237dd90e23d52342b6a9a1a9742 359 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 115 1.2E-12 T 14-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 C4901_02295 05f29237dd90e23d52342b6a9a1a9742 359 SUPERFAMILY SSF51735 1 134 5.69E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_02295 05f29237dd90e23d52342b6a9a1a9742 359 Gene3D G3DSA:3.30.360.10 134 299 1.5E-11 T 14-10-2018 C4901_02295 05f29237dd90e23d52342b6a9a1a9742 359 Gene3D G3DSA:3.40.50.720 1 118 9.2E-22 T 14-10-2018 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 SUPERFAMILY SSF55205 7 431 1.96E-123 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 423 2.5E-112 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 Gene3D G3DSA:3.65.10.10 24 234 3.2E-148 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 12 432 32.005 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 429 1.0E-117 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 Gene3D G3DSA:3.65.10.10 16 423 3.2E-148 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 ProSitePatterns PS00885 EPSP synthase signature 2. 344 362 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C4901_12065 51f3c7bfdf7e35f8d7491146b61753a7 438 PIRSF PIRSF000505 3 436 2.1E-110 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 C4901_07855 fc8e03ac3637d7b0e5d3742ca363e8fa 236 Pfam PF01810 LysE type translocator 36 220 4.5E-20 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 C4901_08465 04e181460d5c9e57aaf63985a87a0a56 169 Gene3D G3DSA:3.40.430.10 1 166 9.2E-56 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C4901_08465 04e181460d5c9e57aaf63985a87a0a56 169 Pfam PF00186 Dihydrofolate reductase 3 161 3.0E-56 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 C4901_08465 04e181460d5c9e57aaf63985a87a0a56 169 PIRSF PIRSF000194 1 164 7.7E-60 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 C4901_08465 04e181460d5c9e57aaf63985a87a0a56 169 SUPERFAMILY SSF53597 1 162 1.96E-52 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C4901_08465 04e181460d5c9e57aaf63985a87a0a56 169 PRINTS PR00070 Dihydrofolate reductase signature 93 107 2.0E-14 T 14-10-2018 C4901_08465 04e181460d5c9e57aaf63985a87a0a56 169 PRINTS PR00070 Dihydrofolate reductase signature 41 52 2.0E-14 T 14-10-2018 C4901_08465 04e181460d5c9e57aaf63985a87a0a56 169 PRINTS PR00070 Dihydrofolate reductase signature 14 24 2.0E-14 T 14-10-2018 C4901_08465 04e181460d5c9e57aaf63985a87a0a56 169 PRINTS PR00070 Dihydrofolate reductase signature 28 36 2.0E-14 T 14-10-2018 C4901_12485 8ef6e1758c96fb4260928ef92911006b 61 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 7 48 1.2E-11 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 C4901_12485 8ef6e1758c96fb4260928ef92911006b 61 Pfam PF04995 Heme exporter protein D (CcmD) 11 47 3.0E-9 T 14-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 C4901_00690 93502b4be4ab212281fb4b043be76457 492 SUPERFAMILY SSF55785 102 202 1.51E-9 T 14-10-2018 IPR035965 PAS domain superfamily C4901_00690 93502b4be4ab212281fb4b043be76457 492 Pfam PF00990 Diguanylate cyclase, GGDEF domain 328 485 3.3E-41 T 14-10-2018 IPR000160 GGDEF domain C4901_00690 93502b4be4ab212281fb4b043be76457 492 Gene3D G3DSA:3.30.450.20 68 191 5.6E-9 T 14-10-2018 C4901_00690 93502b4be4ab212281fb4b043be76457 492 Gene3D G3DSA:3.30.70.270 320 490 6.1E-52 T 14-10-2018 C4901_00690 93502b4be4ab212281fb4b043be76457 492 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 201 324 3.7E-19 T 14-10-2018 IPR000014 PAS domain C4901_00690 93502b4be4ab212281fb4b043be76457 492 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 324 488 1.2E-43 T 14-10-2018 IPR000160 GGDEF domain C4901_00690 93502b4be4ab212281fb4b043be76457 492 SMART SM00091 80 146 0.025 T 14-10-2018 IPR000014 PAS domain C4901_00690 93502b4be4ab212281fb4b043be76457 492 SMART SM00091 205 272 7.6E-7 T 14-10-2018 IPR000014 PAS domain C4901_00690 93502b4be4ab212281fb4b043be76457 492 SUPERFAMILY SSF55785 193 315 5.32E-23 T 14-10-2018 IPR035965 PAS domain superfamily C4901_00690 93502b4be4ab212281fb4b043be76457 492 SMART SM00267 317 490 9.4E-50 T 14-10-2018 IPR000160 GGDEF domain C4901_00690 93502b4be4ab212281fb4b043be76457 492 Gene3D G3DSA:3.30.450.20 193 319 1.2E-25 T 14-10-2018 C4901_00690 93502b4be4ab212281fb4b043be76457 492 Pfam PF13426 PAS domain 99 188 0.72 T 14-10-2018 IPR000014 PAS domain C4901_00690 93502b4be4ab212281fb4b043be76457 492 Pfam PF13426 PAS domain 221 316 4.2E-11 T 14-10-2018 IPR000014 PAS domain C4901_00690 93502b4be4ab212281fb4b043be76457 492 SUPERFAMILY SSF55073 333 489 1.02E-43 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_00730 bd6df00922b7520c00495702463adf99 605 SUPERFAMILY SSF54980 399 514 1.49E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like C4901_00730 bd6df00922b7520c00495702463adf99 605 Gene3D G3DSA:3.30.70.870 307 591 6.1E-128 T 14-10-2018 C4901_00730 bd6df00922b7520c00495702463adf99 605 SUPERFAMILY SSF52540 3 221 2.55E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00730 bd6df00922b7520c00495702463adf99 605 Pfam PF03144 Elongation factor Tu domain 2 220 290 1.6E-10 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C4901_00730 bd6df00922b7520c00495702463adf99 605 Gene3D G3DSA:2.40.30.10 200 300 2.7E-33 T 14-10-2018 C4901_00730 bd6df00922b7520c00495702463adf99 605 SUPERFAMILY SSF50447 183 301 5.52E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_00730 bd6df00922b7520c00495702463adf99 605 Pfam PF00009 Elongation factor Tu GTP binding domain 5 196 3.1E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 Gene3D G3DSA:3.40.50.300 3 199 1.2E-64 T 14-10-2018 C4901_00730 bd6df00922b7520c00495702463adf99 605 Pfam PF00679 Elongation factor G C-terminus 397 478 6.6E-22 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like C4901_00730 bd6df00922b7520c00495702463adf99 605 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 153 2.2E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 Gene3D G3DSA:2.40.50.250 484 600 6.1E-128 T 14-10-2018 C4901_00730 bd6df00922b7520c00495702463adf99 605 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 6 600 1.1E-285 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 SUPERFAMILY SSF54980 303 388 1.37E-15 T 14-10-2018 IPR035647 EF-G domain III/V-like C4901_00730 bd6df00922b7520c00495702463adf99 605 PRINTS PR00315 GTP-binding elongation factor signature 52 60 2.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 PRINTS PR00315 GTP-binding elongation factor signature 72 82 2.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 PRINTS PR00315 GTP-binding elongation factor signature 8 21 2.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 PRINTS PR00315 GTP-binding elongation factor signature 88 99 2.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 PRINTS PR00315 GTP-binding elongation factor signature 124 133 2.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00730 bd6df00922b7520c00495702463adf99 605 Gene3D G3DSA:3.30.70.240 390 483 6.1E-128 T 14-10-2018 C4901_01450 b65343d466b537ff3dce9716d946e94f 96 Gene3D G3DSA:1.10.20.60 2 94 4.4E-23 T 14-10-2018 C4901_01450 b65343d466b537ff3dce9716d946e94f 96 SUPERFAMILY SSF141000 4 94 3.53E-25 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 C4901_01450 b65343d466b537ff3dce9716d946e94f 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 96 1.7E-25 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C4901_01450 b65343d466b537ff3dce9716d946e94f 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 23 91 5.6E-17 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C4901_01450 b65343d466b537ff3dce9716d946e94f 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 21.544 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 C4901_10500 46d5e46a806a89069521388e4bb4e881 230 Gene3D G3DSA:2.40.170.20 3 230 4.2E-42 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C4901_10500 46d5e46a806a89069521388e4bb4e881 230 SUPERFAMILY SSF56935 7 230 4.48E-37 T 14-10-2018 C4901_10500 46d5e46a806a89069521388e4bb4e881 230 Pfam PF00593 TonB dependent receptor 7 228 1.3E-29 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C4901_16110 b16c0569dbe821140da02b20f46f7589 389 Pfam PF06969 HemN C-terminal domain 304 367 3.0E-10 T 14-10-2018 IPR010723 HemN, C-terminal C4901_16110 b16c0569dbe821140da02b20f46f7589 389 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 11 350 2.6E-100 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 C4901_16110 b16c0569dbe821140da02b20f46f7589 389 Gene3D G3DSA:3.80.30.20 3 301 3.0E-94 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C4901_16110 b16c0569dbe821140da02b20f46f7589 389 SMART SM00729 8 225 5.6E-48 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_16110 b16c0569dbe821140da02b20f46f7589 389 SUPERFAMILY SSF102114 9 379 6.28E-104 T 14-10-2018 C4901_16110 b16c0569dbe821140da02b20f46f7589 389 Pfam PF04055 Radical SAM superfamily 13 177 3.9E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_16125 a735ceb0d768b31f1eadb2b7f91f3be8 138 Pfam PF02635 DsrE/DsrF-like family 2 133 6.8E-9 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_16125 a735ceb0d768b31f1eadb2b7f91f3be8 138 Gene3D G3DSA:3.40.1260.10 1 137 1.4E-19 T 14-10-2018 IPR027396 DsrEFH-like C4901_16125 a735ceb0d768b31f1eadb2b7f91f3be8 138 SUPERFAMILY SSF75169 1 125 5.3E-14 T 14-10-2018 IPR027396 DsrEFH-like C4901_10310 99116c3f09fa8802d56d85ce20399e1e 233 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 5 225 1.8E-74 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10310 99116c3f09fa8802d56d85ce20399e1e 233 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 3 106 4.4E-28 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10310 99116c3f09fa8802d56d85ce20399e1e 233 Pfam PF13534 4Fe-4S dicluster domain 143 216 2.6E-10 T 14-10-2018 C4901_10310 99116c3f09fa8802d56d85ce20399e1e 233 Gene3D G3DSA:3.10.20.30 1 102 7.6E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_10310 99116c3f09fa8802d56d85ce20399e1e 233 Gene3D G3DSA:1.10.1060.10 103 233 8.7E-53 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_10310 99116c3f09fa8802d56d85ce20399e1e 233 SUPERFAMILY SSF54292 2 102 8.44E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_10310 99116c3f09fa8802d56d85ce20399e1e 233 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_10310 99116c3f09fa8802d56d85ce20399e1e 233 SUPERFAMILY SSF46548 105 231 2.62E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_07905 7370b9d293c206a5dc08af58b83c7d00 397 Gene3D G3DSA:2.40.30.170 57 277 4.2E-58 T 14-10-2018 C4901_07905 7370b9d293c206a5dc08af58b83c7d00 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 287 4.5E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C4901_07905 7370b9d293c206a5dc08af58b83c7d00 397 SUPERFAMILY SSF111369 53 292 1.83E-53 T 14-10-2018 C4901_07905 7370b9d293c206a5dc08af58b83c7d00 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 387 2.2E-63 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C4901_07905 7370b9d293c206a5dc08af58b83c7d00 397 Gene3D G3DSA:1.10.287.470 98 171 4.2E-58 T 14-10-2018 C4901_07905 7370b9d293c206a5dc08af58b83c7d00 397 Gene3D G3DSA:2.40.420.20 278 389 5.6E-16 T 14-10-2018 C4901_07905 7370b9d293c206a5dc08af58b83c7d00 397 Gene3D G3DSA:2.40.50.100 63 207 4.2E-58 T 14-10-2018 C4901_15935 ebc03871f674e51398789443c578df61 269 SUPERFAMILY SSF53850 45 227 5.44E-7 T 14-10-2018 C4901_15935 ebc03871f674e51398789443c578df61 269 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 31 254 2.1E-14 T 14-10-2018 C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 Pfam PF17092 Penicillin-binding protein OB-like domain 329 436 3.4E-21 T 14-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 Gene3D G3DSA:3.40.710.10 432 781 2.9E-103 T 14-10-2018 C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 Gene3D G3DSA:1.10.3810.10 61 254 6.8E-73 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 SUPERFAMILY SSF53955 56 271 1.49E-72 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 78 734 2.0E-174 T 14-10-2018 C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 Pfam PF00905 Penicillin binding protein transpeptidase domain 441 704 1.5E-27 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 SUPERFAMILY SSF56601 223 781 9.95E-120 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 Pfam PF00912 Transglycosylase 67 241 8.3E-62 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 Gene3D G3DSA:2.40.50.140 344 431 2.4E-23 T 14-10-2018 C4901_16340 c8f2ddc530ff6ce6cc0550f0faa41d33 800 Gene3D G3DSA:3.40.710.10 255 343 3.6E-9 T 14-10-2018 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 380 528 3.2E-41 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 SUPERFAMILY SSF52467 155 352 1.45E-52 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C4901_12415 e8130eb10fddfae007396e64f4db5994 552 Gene3D G3DSA:3.40.50.970 355 551 1.3E-56 T 14-10-2018 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 SUPERFAMILY SSF52518 2 172 3.65E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_12415 e8130eb10fddfae007396e64f4db5994 552 Gene3D G3DSA:3.40.50.1220 184 354 1.3E-51 T 14-10-2018 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 548 5.3E-181 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 327 8.4E-39 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 168 5.5E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 Gene3D G3DSA:3.40.50.970 2 169 6.2E-69 T 14-10-2018 C4901_12415 e8130eb10fddfae007396e64f4db5994 552 SUPERFAMILY SSF52518 360 550 2.14E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_03125 187258b1f8c77f33d4b2acc38cb25926 104 PIRSF PIRSF005894 1 104 4.8E-50 T 14-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 C4901_03125 187258b1f8c77f33d4b2acc38cb25926 104 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 6.8E-48 T 14-10-2018 IPR004480 Monothiol glutaredoxin-related C4901_03125 187258b1f8c77f33d4b2acc38cb25926 104 Gene3D G3DSA:3.40.30.10 6 100 6.6E-34 T 14-10-2018 C4901_03125 187258b1f8c77f33d4b2acc38cb25926 104 Pfam PF00462 Glutaredoxin 16 80 3.8E-18 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C4901_03125 187258b1f8c77f33d4b2acc38cb25926 104 SUPERFAMILY SSF52833 2 103 3.88E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_04835 fd462f79e39b66c75a9408688c7f90a6 310 SUPERFAMILY SSF52821 34 161 1.2E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_04835 fd462f79e39b66c75a9408688c7f90a6 310 Gene3D G3DSA:3.40.250.10 31 172 1.1E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_04835 fd462f79e39b66c75a9408688c7f90a6 310 Gene3D G3DSA:3.40.250.10 177 308 7.6E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_04835 fd462f79e39b66c75a9408688c7f90a6 310 SMART SM00450 180 302 4.2E-13 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_04835 fd462f79e39b66c75a9408688c7f90a6 310 SMART SM00450 37 158 2.9E-13 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_04835 fd462f79e39b66c75a9408688c7f90a6 310 Pfam PF00581 Rhodanese-like domain 38 154 2.3E-18 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_04835 fd462f79e39b66c75a9408688c7f90a6 310 Pfam PF00581 Rhodanese-like domain 185 297 1.4E-12 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_04835 fd462f79e39b66c75a9408688c7f90a6 310 SUPERFAMILY SSF52821 175 304 7.86E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 5.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 5.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 5.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 5.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 5.3E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 165 184 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 Pfam PF00106 short chain dehydrogenase 18 203 3.2E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 Gene3D G3DSA:3.40.50.720 13 250 2.3E-66 T 14-10-2018 C4901_08975 1f61ef1bfa1253f1e90285c9d355fa99 251 SUPERFAMILY SSF51735 11 245 2.91E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_04850 4405cb2c234293cc5457318db83f318d 459 SUPERFAMILY SSF55874 316 453 8.12E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_04850 4405cb2c234293cc5457318db83f318d 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_04850 4405cb2c234293cc5457318db83f318d 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 5.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_04850 4405cb2c234293cc5457318db83f318d 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 5.6E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_04850 4405cb2c234293cc5457318db83f318d 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 452 8.4E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_04850 4405cb2c234293cc5457318db83f318d 459 SUPERFAMILY SSF47384 231 308 7.26E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_04850 4405cb2c234293cc5457318db83f318d 459 Gene3D G3DSA:3.30.565.10 313 457 5.2E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_04850 4405cb2c234293cc5457318db83f318d 459 Gene3D G3DSA:1.20.1480.50 136 232 1.0E-5 T 14-10-2018 C4901_04850 4405cb2c234293cc5457318db83f318d 459 SMART SM00387 354 458 5.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_04850 4405cb2c234293cc5457318db83f318d 459 SMART SM00304 174 227 0.0022 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_04850 4405cb2c234293cc5457318db83f318d 459 SUPERFAMILY SSF158472 174 223 5.89E-5 T 14-10-2018 C4901_04850 4405cb2c234293cc5457318db83f318d 459 Gene3D G3DSA:1.10.287.130 233 309 1.5E-11 T 14-10-2018 C4901_04850 4405cb2c234293cc5457318db83f318d 459 SMART SM00388 244 311 5.0E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_04850 4405cb2c234293cc5457318db83f318d 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 305 1.2E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_11360 fb56adefb33e87da6a366d8f920491ee 148 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 7 130 3.9E-38 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 C4901_11360 fb56adefb33e87da6a366d8f920491ee 148 ProSitePatterns PS00550 Hemerythrin family signature. 59 82 - T 14-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 C4901_11360 fb56adefb33e87da6a366d8f920491ee 148 Gene3D G3DSA:1.20.120.50 1 136 6.3E-42 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C4901_11360 fb56adefb33e87da6a366d8f920491ee 148 SUPERFAMILY SSF47188 3 130 1.57E-35 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C4901_11360 fb56adefb33e87da6a366d8f920491ee 148 Pfam PF01814 Hemerythrin HHE cation binding domain 14 130 1.1E-13 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C4901_10990 e5238738deb77cdb1c909d21401fae58 294 Pfam PF13091 PLD-like domain 15 150 2.6E-14 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C4901_10990 e5238738deb77cdb1c909d21401fae58 294 Pfam PF13091 PLD-like domain 195 290 1.1E-8 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C4901_10990 e5238738deb77cdb1c909d21401fae58 294 Gene3D G3DSA:3.30.870.10 3 153 4.3E-22 T 14-10-2018 C4901_10990 e5238738deb77cdb1c909d21401fae58 294 SUPERFAMILY SSF56024 195 292 4.49E-12 T 14-10-2018 C4901_10990 e5238738deb77cdb1c909d21401fae58 294 Gene3D G3DSA:3.30.870.10 181 293 5.1E-12 T 14-10-2018 C4901_10990 e5238738deb77cdb1c909d21401fae58 294 SUPERFAMILY SSF56024 2 152 1.44E-20 T 14-10-2018 C4901_11905 9d4ceb214bbb4941d4d3c4bf300c0e04 160 Pfam PF02542 YgbB family 1 154 2.8E-57 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C4901_11905 9d4ceb214bbb4941d4d3c4bf300c0e04 160 Gene3D G3DSA:3.30.1330.50 1 159 2.2E-59 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C4901_11905 9d4ceb214bbb4941d4d3c4bf300c0e04 160 SUPERFAMILY SSF69765 1 154 3.14E-58 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C4901_11905 9d4ceb214bbb4941d4d3c4bf300c0e04 160 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 154 3.0E-59 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C4901_11905 9d4ceb214bbb4941d4d3c4bf300c0e04 160 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 32.97 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 Gene3D G3DSA:3.20.20.60 240 577 5.4E-111 T 14-10-2018 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 3.0E-27 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 Pfam PF00391 PEP-utilising enzyme, mobile domain 161 231 1.2E-18 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 299 318 7.6E-27 T 14-10-2018 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 506 518 7.6E-27 T 14-10-2018 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 453 468 7.6E-27 T 14-10-2018 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 470 485 7.6E-27 T 14-10-2018 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 SUPERFAMILY SSF47831 28 146 7.32E-28 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 SUPERFAMILY SSF52009 129 252 4.06E-27 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 Gene3D G3DSA:3.50.30.10 7 239 1.1E-68 T 14-10-2018 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 PIRSF PIRSF000732 2 577 5.0E-205 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 453 471 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 258 546 9.8E-103 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 SUPERFAMILY SSF51621 258 552 4.71E-96 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 Gene3D G3DSA:1.10.274.10 24 149 1.1E-68 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 C4901_02960 4d5cd9ae568988a3ae3972b0bf96cdb2 582 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 571 7.6E-166 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 Gene3D G3DSA:3.40.220.10 1 156 1.0E-39 T 14-10-2018 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 Gene3D G3DSA:3.40.630.10 178 491 1.4E-136 T 14-10-2018 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 183 482 1.6E-124 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 343 350 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 SUPERFAMILY SSF53187 176 489 2.17E-122 T 14-10-2018 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 145 5.4E-27 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 PRINTS PR00481 Cytosol aminopeptidase signature 339 359 2.4E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 PRINTS PR00481 Cytosol aminopeptidase signature 280 301 2.4E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 PRINTS PR00481 Cytosol aminopeptidase signature 317 338 2.4E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 PRINTS PR00481 Cytosol aminopeptidase signature 258 275 2.4E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 PRINTS PR00481 Cytosol aminopeptidase signature 367 382 2.4E-53 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 491 37.429 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 C4901_12535 527cb3db4a736449222bebd45bc472e8 493 SUPERFAMILY SSF52949 1 181 2.0E-36 T 14-10-2018 C4901_05845 362a31e14d72d53823b7277d0b3f34c6 238 Pfam PF00929 Exonuclease 4 171 1.1E-38 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C4901_05845 362a31e14d72d53823b7277d0b3f34c6 238 SMART SM00479 2 180 3.4E-49 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C4901_05845 362a31e14d72d53823b7277d0b3f34c6 238 SUPERFAMILY SSF53098 2 181 6.08E-54 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_05845 362a31e14d72d53823b7277d0b3f34c6 238 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 2 235 1.6E-89 T 14-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_05845 362a31e14d72d53823b7277d0b3f34c6 238 Gene3D G3DSA:3.30.420.10 2 186 8.9E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_05845 362a31e14d72d53823b7277d0b3f34c6 238 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 4 186 1.7E-65 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_04190 3ecadb4d41b41936e0a87d0c3055d624 343 SUPERFAMILY SSF102114 101 322 6.41E-23 T 14-10-2018 C4901_04190 3ecadb4d41b41936e0a87d0c3055d624 343 PIRSF PIRSF004911 1 338 3.2E-114 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase C4901_04190 3ecadb4d41b41936e0a87d0c3055d624 343 TIGRFAM TIGR00238 TIGR00238: KamA family protein 12 326 1.3E-99 T 14-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase C4901_04190 3ecadb4d41b41936e0a87d0c3055d624 343 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 13 333 1.4E-139 T 14-10-2018 IPR022462 Lysine-2,3-aminomutase-like C4901_04190 3ecadb4d41b41936e0a87d0c3055d624 343 Pfam PF13353 4Fe-4S single cluster domain 109 172 3.4E-5 T 14-10-2018 C4901_04190 3ecadb4d41b41936e0a87d0c3055d624 343 Gene3D G3DSA:3.20.20.70 47 332 1.0E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_15115 578f125567bc36f1f1c7883bd8214bd8 215 Pfam PF14236 Domain of unknown function (DUF4338) 12 212 6.9E-69 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 Gene3D G3DSA:2.30.40.10 4 480 1.4E-293 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 SUPERFAMILY SSF51338 426 477 6.47E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.464 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 1.5E-48 T 14-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 Pfam PF01979 Amidohydrolase family 125 454 2.1E-82 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 SUPERFAMILY SSF51556 129 567 1.98E-201 T 14-10-2018 IPR032466 Metal-dependent hydrolase C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 567 8.9E-290 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 SUPERFAMILY SSF51338 2 177 1.53E-57 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 14-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 Gene3D G3DSA:3.20.20.140 129 567 1.4E-293 T 14-10-2018 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 9.5E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 9.5E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 9.5E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_16200 022cd8faa7ae43a628db30c948c8b034 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 9.5E-33 T 14-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 C4901_15730 acec99f6c472c101523ba3aea5ff80ab 358 Pfam PF00665 Integrase core domain 11 115 1.2E-8 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_15730 acec99f6c472c101523ba3aea5ff80ab 358 SUPERFAMILY SSF53098 23 160 2.12E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_10925 bd768d562d0351641b3eb391019974fe 290 Gene3D G3DSA:3.40.50.720 11 276 2.8E-95 T 14-10-2018 C4901_10925 bd768d562d0351641b3eb391019974fe 290 SUPERFAMILY SSF51735 11 288 4.72E-88 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_10925 bd768d562d0351641b3eb391019974fe 290 Gene3D G3DSA:3.90.25.10 166 283 2.8E-95 T 14-10-2018 C4901_10925 bd768d562d0351641b3eb391019974fe 290 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 11 288 2.1E-94 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 C4901_10925 bd768d562d0351641b3eb391019974fe 290 Pfam PF04321 RmlD substrate binding domain 11 289 1.9E-98 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 C4901_07135 506e92e9980d35a506f0ede6ce84c8a3 105 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 1 93 1.0E-8 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 C4901_07135 506e92e9980d35a506f0ede6ce84c8a3 105 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 93 8.0E-22 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 C4901_07135 506e92e9980d35a506f0ede6ce84c8a3 105 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 6 93 1.3E-17 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 C4901_07135 506e92e9980d35a506f0ede6ce84c8a3 105 SUPERFAMILY SSF56214 1 93 3.92E-18 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C4901_07135 506e92e9980d35a506f0ede6ce84c8a3 105 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 2 92 2.5E-13 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C4901_07135 506e92e9980d35a506f0ede6ce84c8a3 105 Gene3D G3DSA:3.90.470.20 1 95 2.2E-24 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 SMART SM01192 140 421 1.4E-177 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 Hamap MF_00318 Enolase [eno]. 3 413 41.367 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 5 419 1.0E-179 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 SMART SM01193 5 135 3.7E-80 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 PRINTS PR00148 Enolase signature 162 175 2.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 PRINTS PR00148 Enolase signature 365 382 2.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 PRINTS PR00148 Enolase signature 336 350 2.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 PRINTS PR00148 Enolase signature 108 124 2.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 PRINTS PR00148 Enolase signature 313 324 2.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 PRINTS PR00148 Enolase signature 38 52 2.8E-44 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 SUPERFAMILY SSF51604 141 419 6.16E-111 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 SUPERFAMILY SSF54826 4 138 2.06E-51 T 14-10-2018 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 PIRSF PIRSF001400 1 420 3.8E-176 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 Gene3D G3DSA:3.30.390.10 3 127 1.1E-50 T 14-10-2018 IPR029017 Enolase-like, N-terminal C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 Pfam PF03952 Enolase, N-terminal domain 5 135 2.7E-53 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 Gene3D G3DSA:3.20.20.120 129 421 9.0E-124 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C4901_03320 ffe297d1d7b99ed3e0345cce20d8d70e 421 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 419 6.6E-109 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 Gene3D G3DSA:3.40.1060.10 200 318 7.8E-34 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 PRINTS PR00415 Aconitase family signature 243 256 2.4E-35 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 PRINTS PR00415 Aconitase family signature 323 337 2.4E-35 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 PRINTS PR00415 Aconitase family signature 167 182 2.4E-35 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 PRINTS PR00415 Aconitase family signature 357 368 2.4E-35 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 PRINTS PR00415 Aconitase family signature 229 242 2.4E-35 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 PRINTS PR00415 Aconitase family signature 416 429 2.4E-35 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 PRINTS PR00415 Aconitase family signature 153 166 2.4E-35 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 PRINTS PR00415 Aconitase family signature 133 141 2.4E-35 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 Pfam PF00330 Aconitase family (aconitate hydratase) 38 479 4.3E-147 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 Gene3D G3DSA:3.30.499.10 5 198 1.3E-73 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 SUPERFAMILY SSF53732 10 514 2.22E-149 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 Gene3D G3DSA:3.30.499.10 319 489 6.3E-58 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 ProSitePatterns PS01244 Aconitase family signature 2. 416 429 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 Pfam PF00694 Aconitase C-terminal domain 557 686 1.8E-32 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 Gene3D G3DSA:3.20.19.10 535 752 2.8E-80 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 TIGRFAM TIGR01340 aconitase_mito: aconitate hydratase, mitochondrial 16 750 6.8E-301 T 14-10-2018 IPR006248 Aconitase, mitochondrial-like GO:0003994|GO:0006099|GO:0051539 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 C4901_14230 6f4578133b82021ea5fe997223b7afc7 762 SUPERFAMILY SSF52016 532 750 2.35E-52 T 14-10-2018 C4901_14945 9eb8822d0226048dda3d0d6056da3f14 242 Gene3D G3DSA:3.40.50.300 11 219 2.7E-53 T 14-10-2018 C4901_14945 9eb8822d0226048dda3d0d6056da3f14 242 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 14 183 5.3E-38 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C4901_14945 9eb8822d0226048dda3d0d6056da3f14 242 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 10 222 24.481 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C4901_14945 9eb8822d0226048dda3d0d6056da3f14 242 SUPERFAMILY SSF52540 10 190 2.55E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14945 9eb8822d0226048dda3d0d6056da3f14 242 Pfam PF13500 AAA domain 11 186 2.5E-33 T 14-10-2018 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 Gene3D G3DSA:3.40.50.720 236 449 1.4E-74 T 14-10-2018 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 SUPERFAMILY SSF52413 308 438 2.35E-36 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 PIRSF PIRSF500134 1 446 2.9E-187 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 186 7.5E-67 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 Gene3D G3DSA:1.20.5.100 203 234 2.4E-19 T 14-10-2018 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 Gene3D G3DSA:3.40.50.720 1 202 4.9E-82 T 14-10-2018 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 SUPERFAMILY SSF48179 204 301 2.65E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 SUPERFAMILY SSF51735 1 195 2.47E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 320 428 4.4E-28 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 PIRSF PIRSF000124 1 443 1.7E-150 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 424 4.7E-137 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 204 296 1.7E-37 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C4901_01105 a866c1c86c0817db5441cfab78bb765e 450 SMART SM00984 320 428 4.5E-44 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 C4901_06095 616fd40a604b9f31abb85daf896217b2 379 Gene3D G3DSA:3.40.640.10 16 257 4.0E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_06095 616fd40a604b9f31abb85daf896217b2 379 SUPERFAMILY SSF53383 5 375 1.2E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_06095 616fd40a604b9f31abb85daf896217b2 379 Pfam PF00266 Aminotransferase class-V 5 364 9.0E-75 T 14-10-2018 IPR000192 Aminotransferase class V domain C4901_06095 616fd40a604b9f31abb85daf896217b2 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C4901_06095 616fd40a604b9f31abb85daf896217b2 379 PIRSF PIRSF005572 2 379 1.0E-124 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 C4901_06095 616fd40a604b9f31abb85daf896217b2 379 Gene3D G3DSA:3.90.1150.10 5 371 4.0E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_15100 743d4c245cc07720bea738a91f6242f4 88 Gene3D G3DSA:3.10.450.530 1 84 9.3E-18 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily C4901_15100 743d4c245cc07720bea738a91f6242f4 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 82 5.3E-26 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system C4901_01560 aa1cb6a026f7476459f4d10fb1d7dabb 84 Pfam PF01381 Helix-turn-helix 14 66 7.5E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_01560 aa1cb6a026f7476459f4d10fb1d7dabb 84 SMART SM00530 13 68 7.4E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_01560 aa1cb6a026f7476459f4d10fb1d7dabb 84 Gene3D G3DSA:1.10.260.40 4 75 4.5E-20 T 14-10-2018 C4901_01560 aa1cb6a026f7476459f4d10fb1d7dabb 84 SUPERFAMILY SSF47413 9 74 1.07E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_11790 058901520f3cb5bda981fc6488698c53 374 Pfam PF00535 Glycosyl transferase family 2 47 160 5.9E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_11790 058901520f3cb5bda981fc6488698c53 374 SUPERFAMILY SSF53448 28 300 1.31E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_11790 058901520f3cb5bda981fc6488698c53 374 Gene3D G3DSA:3.90.550.10 39 274 1.2E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_10945 fbd9b3433320211557eda3a904f215f4 574 SUPERFAMILY SSF90123 31 504 1.44E-22 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_10945 fbd9b3433320211557eda3a904f215f4 574 SUPERFAMILY SSF52540 367 557 6.27E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10945 fbd9b3433320211557eda3a904f215f4 574 Gene3D G3DSA:1.20.1560.10 13 351 3.1E-5 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_10945 fbd9b3433320211557eda3a904f215f4 574 Gene3D G3DSA:3.40.50.300 359 565 7.3E-40 T 14-10-2018 C4901_10945 fbd9b3433320211557eda3a904f215f4 574 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_10945 fbd9b3433320211557eda3a904f215f4 574 Pfam PF00005 ABC transporter 384 519 6.4E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_10945 fbd9b3433320211557eda3a904f215f4 574 SMART SM00382 393 566 2.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_10945 fbd9b3433320211557eda3a904f215f4 574 Pfam PF06472 ABC transporter transmembrane region 2 3 297 5.3E-67 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C4901_13435 742df74f744cdc57c13160fd5656779b 413 Pfam PF00925 GTP cyclohydrolase II 223 369 3.4E-13 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C4901_13435 742df74f744cdc57c13160fd5656779b 413 SUPERFAMILY SSF142695 198 372 1.27E-30 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C4901_13435 742df74f744cdc57c13160fd5656779b 413 Gene3D G3DSA:3.40.50.10990 214 372 6.5E-30 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C4901_13435 742df74f744cdc57c13160fd5656779b 413 Pfam PF12471 GTP cyclohydrolase N terminal 4 193 8.3E-81 T 14-10-2018 IPR022163 GTP cyclohydrolase N-terminal C4901_01545 c64776e933e62e6490844952e2da5e34 745 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 140 277 4.2E-10 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_01545 c64776e933e62e6490844952e2da5e34 745 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 162 6.3E-6 T 14-10-2018 C4901_01545 c64776e933e62e6490844952e2da5e34 745 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 425 6.3E-6 T 14-10-2018 C4901_01545 c64776e933e62e6490844952e2da5e34 745 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 569 580 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_01545 c64776e933e62e6490844952e2da5e34 745 Pfam PF13187 4Fe-4S dicluster domain 539 583 7.7E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_01545 c64776e933e62e6490844952e2da5e34 745 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 141 160 9.0E-6 T 14-10-2018 C4901_01545 c64776e933e62e6490844952e2da5e34 745 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 410 426 9.0E-6 T 14-10-2018 C4901_01545 c64776e933e62e6490844952e2da5e34 745 Gene3D G3DSA:3.50.50.60 138 363 1.7E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_01545 c64776e933e62e6490844952e2da5e34 745 Pfam PF02662 Methyl-viologen-reducing hydrogenase, delta subunit 613 738 2.0E-37 T 14-10-2018 IPR003813 F420-non-reducing hydrogenase iron-sulfur subunit D GO:0055114 C4901_01545 c64776e933e62e6490844952e2da5e34 745 SUPERFAMILY SSF54862 531 587 1.87E-16 T 14-10-2018 C4901_01545 c64776e933e62e6490844952e2da5e34 745 Gene3D G3DSA:3.30.70.20 526 591 2.0E-12 T 14-10-2018 C4901_01545 c64776e933e62e6490844952e2da5e34 745 SUPERFAMILY SSF51905 140 511 7.77E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SMART SM01058 480 577 1.5E-45 T 14-10-2018 IPR003711 CarD-like/TRCF domain C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SUPERFAMILY SSF141259 472 549 3.4E-23 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Gene3D G3DSA:3.40.50.11180 30 339 9.7E-108 T 14-10-2018 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Gene3D G3DSA:3.90.1150.50 1006 1151 1.4E-41 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Pfam PF02559 CarD-like/TRCF domain 481 576 4.2E-26 T 14-10-2018 IPR003711 CarD-like/TRCF domain C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Pfam PF00271 Helicase conserved C-terminal domain 807 910 3.4E-15 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SUPERFAMILY SSF52540 354 467 1.86E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Gene3D G3DSA:3.30.2060.10 135 220 9.7E-108 T 14-10-2018 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Pfam PF00270 DEAD/DEAH box helicase 606 762 1.2E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SMART SM00487 601 791 1.0E-34 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Gene3D G3DSA:3.40.50.11140 359 455 8.2E-7 T 14-10-2018 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Pfam PF03461 TRCF domain 1011 1103 5.9E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SMART SM00982 1010 1110 6.1E-49 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SUPERFAMILY SSF143517 1001 1148 2.35E-41 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SUPERFAMILY SSF52540 21 347 3.36E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SUPERFAMILY SSF52540 525 784 5.58E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SUPERFAMILY SSF52540 783 991 4.89E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 SMART SM00490 827 911 8.6E-18 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 152 1083 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Gene3D G3DSA:3.40.50.300 480 991 1.5E-230 T 14-10-2018 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Gene3D G3DSA:3.40.50.300 543 782 1.5E-230 T 14-10-2018 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Gene3D G3DSA:2.30.30.840 484 542 1.5E-230 T 14-10-2018 C4901_11920 a446fa1709e8f30e0d7d31acd0c63076 1167 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 28 1111 27.526 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 C4901_14380 4361eebfdfbc74cd3d05449b901c1240 270 Gene3D G3DSA:3.20.20.70 1 265 2.2E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_14380 4361eebfdfbc74cd3d05449b901c1240 270 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 262 34.128 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 C4901_14380 4361eebfdfbc74cd3d05449b901c1240 270 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 260 1.1E-85 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 C4901_14380 4361eebfdfbc74cd3d05449b901c1240 270 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 56 74 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 C4901_14380 4361eebfdfbc74cd3d05449b901c1240 270 SUPERFAMILY SSF51366 11 262 2.71E-78 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C4901_03135 0c87dc8cafd007ab81225830130b683e 212 Gene3D G3DSA:3.40.190.10 3 199 1.0E-67 T 14-10-2018 C4901_03135 0c87dc8cafd007ab81225830130b683e 212 Gene3D G3DSA:3.40.190.10 93 179 1.0E-67 T 14-10-2018 C4901_03135 0c87dc8cafd007ab81225830130b683e 212 SUPERFAMILY SSF53850 1 206 5.04E-64 T 14-10-2018 C4901_03135 0c87dc8cafd007ab81225830130b683e 212 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 146 167 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 C4901_03135 0c87dc8cafd007ab81225830130b683e 212 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 211 51.689 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 C4901_03135 0c87dc8cafd007ab81225830130b683e 212 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 187 3.1E-57 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 C4901_03135 0c87dc8cafd007ab81225830130b683e 212 Pfam PF01634 ATP phosphoribosyltransferase 51 206 1.5E-49 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 C4901_13410 b17108c3b247a057221edd59d4257525 267 Gene3D G3DSA:3.40.50.1580 2 260 1.9E-69 T 14-10-2018 C4901_13410 b17108c3b247a057221edd59d4257525 267 SUPERFAMILY SSF53167 3 254 1.83E-63 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 C4901_13410 b17108c3b247a057221edd59d4257525 267 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 69 84 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_13410 b17108c3b247a057221edd59d4257525 267 Pfam PF01048 Phosphorylase superfamily 22 252 2.6E-36 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 C4901_10330 36f51839ee66e1f7bc55a86e7ae1439d 397 Gene3D G3DSA:3.30.70.1400 101 186 8.6E-33 T 14-10-2018 C4901_10330 36f51839ee66e1f7bc55a86e7ae1439d 397 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 259 323 8.5E-28 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site C4901_10330 36f51839ee66e1f7bc55a86e7ae1439d 397 Gene3D G3DSA:2.40.30.160 268 385 2.3E-31 T 14-10-2018 C4901_10330 36f51839ee66e1f7bc55a86e7ae1439d 397 SUPERFAMILY SSF103025 77 313 2.51E-60 T 14-10-2018 C4901_10330 36f51839ee66e1f7bc55a86e7ae1439d 397 Gene3D G3DSA:3.30.70.1630 98 265 8.6E-33 T 14-10-2018 C4901_10330 36f51839ee66e1f7bc55a86e7ae1439d 397 SUPERFAMILY SSF101790 316 393 4.77E-5 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal C4901_10330 36f51839ee66e1f7bc55a86e7ae1439d 397 Pfam PF01571 Aminomethyltransferase folate-binding domain 79 288 7.0E-13 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain C4901_09700 b3a2f507c5b5663e05c28d157a2ac0f0 339 SMART SM00729 23 229 2.3E-11 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_09700 b3a2f507c5b5663e05c28d157a2ac0f0 339 Pfam PF04055 Radical SAM superfamily 28 186 5.1E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_09700 b3a2f507c5b5663e05c28d157a2ac0f0 339 Gene3D G3DSA:3.20.20.70 11 339 2.5E-81 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_09700 b3a2f507c5b5663e05c28d157a2ac0f0 339 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 29 40 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_09700 b3a2f507c5b5663e05c28d157a2ac0f0 339 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 14 339 1.4E-93 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_09700 b3a2f507c5b5663e05c28d157a2ac0f0 339 Pfam PF06463 Molybdenum Cofactor Synthesis C 193 321 4.7E-31 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_09700 b3a2f507c5b5663e05c28d157a2ac0f0 339 SUPERFAMILY SSF102114 14 290 4.05E-67 T 14-10-2018 C4901_09700 b3a2f507c5b5663e05c28d157a2ac0f0 339 Pfam PF13353 4Fe-4S single cluster domain 29 132 1.1E-8 T 14-10-2018 C4901_15770 6b0334536c543d518490465eb27db202 147 Pfam PF09424 Yqey-like protein 4 146 3.4E-48 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 C4901_15770 6b0334536c543d518490465eb27db202 147 Gene3D G3DSA:1.10.10.410 91 147 1.6E-17 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal C4901_15770 6b0334536c543d518490465eb27db202 147 Gene3D G3DSA:1.10.1510.10 1 89 1.7E-26 T 14-10-2018 C4901_15770 6b0334536c543d518490465eb27db202 147 SUPERFAMILY SSF89095 1 147 4.29E-38 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 C4901_02535 c906df2797cd7df97ddae7216cb5219c 137 SMART SM01321 14 133 3.1E-45 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_02535 c906df2797cd7df97ddae7216cb5219c 137 SUPERFAMILY SSF143422 5 134 1.57E-48 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_02535 c906df2797cd7df97ddae7216cb5219c 137 Pfam PF01797 Transposase IS200 like 14 133 2.1E-42 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_02535 c906df2797cd7df97ddae7216cb5219c 137 Gene3D G3DSA:3.30.70.1290 3 135 5.5E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Gene3D G3DSA:1.10.150.20 434 492 9.7E-20 T 14-10-2018 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Pfam PF14520 Helix-hairpin-helix domain 436 489 4.4E-8 T 14-10-2018 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SMART SM00322 304 368 2.7E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SMART SM00322 233 296 9.1 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 428 29.18 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Pfam PF08529 NusA N-terminal domain 4 128 2.5E-35 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SUPERFAMILY SSF50249 136 202 1.11E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SUPERFAMILY SSF54814 203 280 1.63E-28 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Pfam PF13184 NusA-like KH domain 233 300 2.5E-28 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SUPERFAMILY SSF47794 357 419 7.85E-15 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Gene3D G3DSA:3.30.1480.10 1 133 2.7E-40 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Gene3D G3DSA:2.40.50.140 139 201 6.0E-21 T 14-10-2018 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SUPERFAMILY SSF47794 431 494 6.91E-16 T 14-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Gene3D G3DSA:1.10.150.20 355 423 7.4E-19 T 14-10-2018 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Pfam PF00575 S1 RNA binding domain 138 197 3.4E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SMART SM00316 137 203 2.5E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SUPERFAMILY SSF69705 1 130 5.62E-38 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 SUPERFAMILY SSF54814 282 344 3.34E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 345 2.1E-126 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 C4901_04660 48ef74b3299665388a014b457edcfc0e 500 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 443 492 4.1E-20 T 14-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Gene3D G3DSA:3.30.300.20 281 350 1.2E-24 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_04660 48ef74b3299665388a014b457edcfc0e 500 Gene3D G3DSA:3.30.300.20 202 280 1.4E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_16100 bb1f1005515ecef489c2f3a37a8e9443 240 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.1E-114 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 C4901_16100 bb1f1005515ecef489c2f3a37a8e9443 240 Pfam PF01138 3' exoribonuclease family, domain 1 11 140 4.7E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_16100 bb1f1005515ecef489c2f3a37a8e9443 240 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site C4901_16100 bb1f1005515ecef489c2f3a37a8e9443 240 SUPERFAMILY SSF54211 1 181 6.58E-47 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_16100 bb1f1005515ecef489c2f3a37a8e9443 240 Pfam PF03725 3' exoribonuclease family, domain 2 159 223 5.2E-8 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_16100 bb1f1005515ecef489c2f3a37a8e9443 240 SUPERFAMILY SSF55666 153 236 7.33E-24 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_16100 bb1f1005515ecef489c2f3a37a8e9443 240 Gene3D G3DSA:3.30.230.70 10 238 4.9E-62 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_16100 bb1f1005515ecef489c2f3a37a8e9443 240 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 45.204 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 240 268 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 Gene3D G3DSA:3.40.50.20 1 85 2.1E-29 T 14-10-2018 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 Gene3D G3DSA:3.30.470.20 86 293 4.1E-70 T 14-10-2018 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 64 75 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 SUPERFAMILY SSF52440 6 97 1.06E-28 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 297 2.2E-92 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 Gene3D G3DSA:3.30.1490.20 112 175 4.1E-70 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 SUPERFAMILY SSF56059 97 294 2.12E-51 T 14-10-2018 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 PIRSF PIRSF039102 2 54 3.8E-8 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 PIRSF PIRSF039102 49 300 2.0E-78 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 Pfam PF01820 D-ala D-ala ligase N-terminus 6 87 2.3E-16 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 Pfam PF07478 D-ala D-ala ligase C-terminus 120 294 5.4E-48 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03415 ef0b5bb48df6136ada2eab12b626ca2d 301 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 5 298 32.394 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_05860 6e1523503f8c00db94437b736fd8370f 684 SUPERFAMILY SSF55781 113 263 6.73E-12 T 14-10-2018 C4901_05860 6e1523503f8c00db94437b736fd8370f 684 SUPERFAMILY SSF141868 442 678 3.27E-32 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05860 6e1523503f8c00db94437b736fd8370f 684 Pfam PF00563 EAL domain 443 666 1.1E-30 T 14-10-2018 IPR001633 EAL domain C4901_05860 6e1523503f8c00db94437b736fd8370f 684 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 262 424 1.1E-41 T 14-10-2018 IPR000160 GGDEF domain C4901_05860 6e1523503f8c00db94437b736fd8370f 684 SMART SM00052 436 672 2.5E-10 T 14-10-2018 IPR001633 EAL domain C4901_05860 6e1523503f8c00db94437b736fd8370f 684 SUPERFAMILY SSF55073 270 427 4.24E-46 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_05860 6e1523503f8c00db94437b736fd8370f 684 Gene3D G3DSA:3.30.70.270 267 435 1.9E-52 T 14-10-2018 C4901_05860 6e1523503f8c00db94437b736fd8370f 684 Pfam PF00990 Diguanylate cyclase, GGDEF domain 265 421 1.5E-44 T 14-10-2018 IPR000160 GGDEF domain C4901_05860 6e1523503f8c00db94437b736fd8370f 684 Gene3D G3DSA:3.20.20.450 439 683 9.0E-35 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05860 6e1523503f8c00db94437b736fd8370f 684 Gene3D G3DSA:3.30.450.40 101 266 2.2E-13 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_05860 6e1523503f8c00db94437b736fd8370f 684 SMART SM00267 254 426 5.5E-57 T 14-10-2018 IPR000160 GGDEF domain C4901_13455 164bb77423f7bdc6aa0864a6181441af 457 Gene3D G3DSA:3.30.70.100 387 449 2.0E-8 T 14-10-2018 C4901_13455 164bb77423f7bdc6aa0864a6181441af 457 SUPERFAMILY SSF103473 5 385 2.09E-59 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_13455 164bb77423f7bdc6aa0864a6181441af 457 Pfam PF07690 Major Facilitator Superfamily 13 350 1.5E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_13455 164bb77423f7bdc6aa0864a6181441af 457 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C4901_13455 164bb77423f7bdc6aa0864a6181441af 457 Gene3D G3DSA:1.20.1250.20 1 386 8.1E-83 T 14-10-2018 C4901_16230 3cfec6046e0397a0f090ed91caeee40f 434 Gene3D G3DSA:2.40.50.100 203 252 3.2E-29 T 14-10-2018 C4901_16230 3cfec6046e0397a0f090ed91caeee40f 434 SUPERFAMILY SSF111369 129 329 4.45E-18 T 14-10-2018 C4901_16230 3cfec6046e0397a0f090ed91caeee40f 434 Gene3D G3DSA:1.10.287.470 192 202 3.2E-29 T 14-10-2018 C4901_16230 3cfec6046e0397a0f090ed91caeee40f 434 Gene3D G3DSA:2.40.420.20 329 420 1.2E-19 T 14-10-2018 C4901_16230 3cfec6046e0397a0f090ed91caeee40f 434 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 113 325 2.1E-68 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C4901_16230 3cfec6046e0397a0f090ed91caeee40f 434 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 210 396 6.5E-33 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C4901_16230 3cfec6046e0397a0f090ed91caeee40f 434 Gene3D G3DSA:2.40.30.170 253 327 3.2E-29 T 14-10-2018 C4901_16230 3cfec6046e0397a0f090ed91caeee40f 434 Gene3D G3DSA:2.40.50.100 130 178 3.1E-5 T 14-10-2018 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 Gene3D G3DSA:2.40.10.220 573 690 1.6E-7 T 14-10-2018 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 Pfam PF07238 PilZ domain 577 682 4.9E-6 T 14-10-2018 IPR009875 PilZ domain GO:0035438 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 Gene3D G3DSA:3.90.550.10 134 369 2.3E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_13500 6193c588abb6bc9b359bf87c22397872 748 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 13 723 2.2E-227 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 Pfam PF00535 Glycosyl transferase family 2 144 331 6.2E-34 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 SUPERFAMILY SSF53448 143 443 3.56E-47 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_13500 6193c588abb6bc9b359bf87c22397872 748 PRINTS PR01439 Cellulose synthase subunit A signature 550 571 5.5E-23 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 PRINTS PR01439 Cellulose synthase subunit A signature 438 457 5.5E-23 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 PRINTS PR01439 Cellulose synthase subunit A signature 150 169 5.5E-23 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 PRINTS PR01439 Cellulose synthase subunit A signature 409 435 5.5E-23 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 PRINTS PR01439 Cellulose synthase subunit A signature 478 497 5.5E-23 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 PRINTS PR01439 Cellulose synthase subunit A signature 96 121 5.5E-23 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 PRINTS PR01439 Cellulose synthase subunit A signature 68 88 5.5E-23 T 14-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 C4901_13500 6193c588abb6bc9b359bf87c22397872 748 SUPERFAMILY SSF141371 574 671 1.67E-5 T 14-10-2018 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 Gene3D G3DSA:3.30.470.130 1 418 1.9E-70 T 14-10-2018 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SMART SM00878 314 413 1.0E-8 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 Gene3D G3DSA:3.30.1360.40 757 856 5.3E-24 T 14-10-2018 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SUPERFAMILY SSF50891 599 723 4.93E-32 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SUPERFAMILY SSF50891 894 1026 2.12E-25 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SMART SM00796 773 1010 2.3E-98 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 Gene3D G3DSA:2.40.100.10 861 1083 1.4E-91 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 Pfam PF02785 Biotin carboxylase C-terminal domain 312 413 1.8E-13 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 422 736 2.3E-87 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 775 995 5.7E-45 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 97 292 2.1E-20 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SUPERFAMILY SSF56059 70 319 1.12E-22 T 14-10-2018 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 Gene3D G3DSA:2.40.100.10 598 739 7.7E-59 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SMART SM00797 444 735 3.8E-158 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SUPERFAMILY SSF51246 305 414 2.15E-15 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SUPERFAMILY SSF52440 1 90 3.84E-12 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 SUPERFAMILY SSF160467 775 870 1.83E-15 T 14-10-2018 C4901_07260 94b35ede6812a7c3b7d3826b7377a908 1092 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 445 717 8.4E-88 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B C4901_04060 82b9d0e0fbd10e620ad673fbac1d7ade 150 PRINTS PR00502 NUDIX hydrolase family signature 37 51 7.3E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C4901_04060 82b9d0e0fbd10e620ad673fbac1d7ade 150 PRINTS PR00502 NUDIX hydrolase family signature 51 66 7.3E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C4901_04060 82b9d0e0fbd10e620ad673fbac1d7ade 150 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C4901_04060 82b9d0e0fbd10e620ad673fbac1d7ade 150 Pfam PF00293 NUDIX domain 12 118 8.0E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_04060 82b9d0e0fbd10e620ad673fbac1d7ade 150 SUPERFAMILY SSF55811 6 136 2.44E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_04060 82b9d0e0fbd10e620ad673fbac1d7ade 150 Gene3D G3DSA:3.90.79.10 4 133 9.1E-37 T 14-10-2018 C4901_09675 11b2f8eed9c7e5301d8add65df776e86 305 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 98 301 8.4E-72 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 C4901_09675 11b2f8eed9c7e5301d8add65df776e86 305 Gene3D G3DSA:3.90.850.10 92 304 5.3E-84 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C4901_09675 11b2f8eed9c7e5301d8add65df776e86 305 SUPERFAMILY SSF56529 87 302 3.66E-78 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 C4901_05415 92d7b38ffc81ee838d0778813c7ffa45 647 SUPERFAMILY SSF48239 55 321 2.67E-70 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid C4901_05415 92d7b38ffc81ee838d0778813c7ffa45 647 SUPERFAMILY SSF48239 257 643 1.88E-97 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid C4901_05415 92d7b38ffc81ee838d0778813c7ffa45 647 Gene3D G3DSA:1.50.10.20 51 324 7.6E-211 T 14-10-2018 C4901_05415 92d7b38ffc81ee838d0778813c7ffa45 647 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 21 646 6.6E-241 T 14-10-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 C4901_05415 92d7b38ffc81ee838d0778813c7ffa45 647 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 325 643 5.9E-133 T 14-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 C4901_05415 92d7b38ffc81ee838d0778813c7ffa45 647 Gene3D G3DSA:1.50.10.20 33 641 7.6E-211 T 14-10-2018 C4901_05415 92d7b38ffc81ee838d0778813c7ffa45 647 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 29 643 2.0E-180 T 14-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 C4901_05415 92d7b38ffc81ee838d0778813c7ffa45 647 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 31 313 9.7E-105 T 14-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 C4901_14180 013d426cfc57373a16649223d6f90ccc 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-14 T 14-10-2018 C4901_14180 013d426cfc57373a16649223d6f90ccc 143 Gene3D G3DSA:3.30.1550.10 2 72 1.0E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily C4901_14180 013d426cfc57373a16649223d6f90ccc 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 138 1.1E-23 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 C4901_14180 013d426cfc57373a16649223d6f90ccc 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 31.023 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 C4901_14180 013d426cfc57373a16649223d6f90ccc 143 SUPERFAMILY SSF46906 68 140 1.44E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily C4901_14180 013d426cfc57373a16649223d6f90ccc 143 SMART SM00649 9 141 9.3E-84 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 C4901_14180 013d426cfc57373a16649223d6f90ccc 143 SUPERFAMILY SSF54747 3 73 2.49E-29 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily C4901_14180 013d426cfc57373a16649223d6f90ccc 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 1.4E-64 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14180 013d426cfc57373a16649223d6f90ccc 143 Gene3D G3DSA:1.10.10.2720 73 143 1.9E-27 T 14-10-2018 C4901_14180 013d426cfc57373a16649223d6f90ccc 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.1E-28 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 SUPERFAMILY SSF53850 43 264 4.35E-30 T 14-10-2018 C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 SUPERFAMILY SSF53955 243 450 5.12E-34 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 6 458 41.055 T 14-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 SMART SM00062 42 265 7.3E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 Pfam PF01464 Transglycosylase SLT domain 289 398 2.2E-19 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 Gene3D G3DSA:1.10.530.10 284 460 1.0E-33 T 14-10-2018 C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 Gene3D G3DSA:3.40.190.10 126 221 3.4E-60 T 14-10-2018 C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 263 2.1E-24 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF C4901_10650 124d8a2fe9176d3e3904106a43fa4cf7 470 Gene3D G3DSA:3.40.190.10 40 258 3.4E-60 T 14-10-2018 C4901_09295 2ddef1aa9231238f9b0c6a54110e9e86 112 Gene3D G3DSA:2.60.120.10 7 111 7.2E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_09295 2ddef1aa9231238f9b0c6a54110e9e86 112 SUPERFAMILY SSF51182 5 100 1.66E-13 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_00185 ebb3291241f98f7e4cef6e9945def02b 208 SUPERFAMILY SSF81452 24 204 4.45E-32 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00185 ebb3291241f98f7e4cef6e9945def02b 208 Pfam PF00510 Cytochrome c oxidase subunit III 27 204 2.9E-5 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00185 ebb3291241f98f7e4cef6e9945def02b 208 Gene3D G3DSA:1.20.120.80 20 207 9.7E-31 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_02665 6c27be559efc6ec159eae4b81782fc25 191 Gene3D G3DSA:2.20.70.10 1 35 4.3E-15 T 14-10-2018 C4901_02665 6c27be559efc6ec159eae4b81782fc25 191 Pfam PF00293 NUDIX domain 41 141 1.3E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_02665 6c27be559efc6ec159eae4b81782fc25 191 SUPERFAMILY SSF55811 3 162 1.49E-36 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_02665 6c27be559efc6ec159eae4b81782fc25 191 Pfam PF14803 Nudix N-terminal 3 35 2.2E-14 T 14-10-2018 IPR029401 Nudix hydrolase, N-terminal KEGG: 00230+3.6.1.13|KEGG: 00740+3.6.1.18 C4901_02665 6c27be559efc6ec159eae4b81782fc25 191 Gene3D G3DSA:3.90.79.10 36 180 5.7E-37 T 14-10-2018 C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 145 1.8E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 Gene3D G3DSA:3.40.50.720 168 323 1.6E-132 T 14-10-2018 C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 SUPERFAMILY SSF51735 150 314 1.77E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 SUPERFAMILY SSF50129 9 173 2.74E-54 T 14-10-2018 IPR011032 GroES-like superfamily C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 Pfam PF00107 Zinc-binding dehydrogenase 187 310 2.4E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 SMART SM00829 12 344 8.3E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 Gene3D G3DSA:3.90.180.10 11 343 1.6E-132 T 14-10-2018 C4901_04410 03aa7ab8a64367861b5a4c25c8e4a55a 353 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 180 207 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 Pfam PF00037 4Fe-4S binding domain 608 627 1.7E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 Gene3D G3DSA:3.50.50.60 323 410 2.9E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 SUPERFAMILY SSF46548 47 156 4.24E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 PRINTS PR00419 Adrenodoxin reductase family signature 279 293 5.6E-16 T 14-10-2018 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 5.6E-16 T 14-10-2018 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 5.6E-16 T 14-10-2018 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 5.6E-16 T 14-10-2018 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 Gene3D G3DSA:3.30.70.20 577 634 2.5E-8 T 14-10-2018 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 614 625 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 461 1.0E-23 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 47 134 5.1E-12 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 Gene3D G3DSA:3.50.50.60 146 271 2.1E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 Gene3D G3DSA:3.50.50.60 411 462 2.9E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 Gene3D G3DSA:1.10.1060.10 2 145 8.0E-18 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 SUPERFAMILY SSF46548 524 633 1.78E-10 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_06805 27701f54a683db1d709cb6d6c06cc976 635 SUPERFAMILY SSF51971 146 411 2.18E-51 T 14-10-2018 C4901_10375 a5c18d1ca2b85d54f1f31848bb4f19d5 391 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 3 378 37.693 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C4901_10375 a5c18d1ca2b85d54f1f31848bb4f19d5 391 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 7 376 4.1E-109 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C4901_10375 a5c18d1ca2b85d54f1f31848bb4f19d5 391 SUPERFAMILY SSF53756 5 376 2.98E-35 T 14-10-2018 C4901_10375 a5c18d1ca2b85d54f1f31848bb4f19d5 391 Pfam PF02684 Lipid-A-disaccharide synthetase 8 350 4.4E-99 T 14-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 C4901_10375 a5c18d1ca2b85d54f1f31848bb4f19d5 391 Gene3D G3DSA:3.40.50.2000 173 357 6.0E-6 T 14-10-2018 C4901_07335 c160e35ddf4b58fbc4f46cc618b76d6f 241 SUPERFAMILY SSF52540 12 111 1.33E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07335 c160e35ddf4b58fbc4f46cc618b76d6f 241 Gene3D G3DSA:3.40.50.300 9 158 1.2E-5 T 14-10-2018 C4901_15590 1699fc8bcfe440513ea3f7e57e056f71 97 Pfam PF00106 short chain dehydrogenase 3 66 3.4E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15590 1699fc8bcfe440513ea3f7e57e056f71 97 SUPERFAMILY SSF51735 3 80 4.62E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_15590 1699fc8bcfe440513ea3f7e57e056f71 97 Gene3D G3DSA:3.40.50.720 1 83 1.9E-14 T 14-10-2018 C4901_01200 a7954fb6dad9531b7866c30fe24f7f9f 385 Pfam PF01545 Cation efflux family 22 215 9.5E-40 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C4901_01200 a7954fb6dad9531b7866c30fe24f7f9f 385 Gene3D G3DSA:1.20.1510.10 17 215 2.3E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C4901_01200 a7954fb6dad9531b7866c30fe24f7f9f 385 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 298 2.6E-61 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C4901_01200 a7954fb6dad9531b7866c30fe24f7f9f 385 SUPERFAMILY SSF161111 18 216 8.37E-45 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C4901_01200 a7954fb6dad9531b7866c30fe24f7f9f 385 Gene3D G3DSA:3.30.70.1350 217 297 1.6E-20 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 C4901_01200 a7954fb6dad9531b7866c30fe24f7f9f 385 Pfam PF16916 Dimerisation domain of Zinc Transporter 220 295 2.5E-23 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain C4901_01200 a7954fb6dad9531b7866c30fe24f7f9f 385 SUPERFAMILY SSF160240 219 298 1.31E-19 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 C4901_01595 c4263242d05eac4c4dbac23863603cbd 306 SMART SM01009 5 125 1.2E-4 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal C4901_01595 c4263242d05eac4c4dbac23863603cbd 306 SUPERFAMILY SSF48150 124 299 7.68E-38 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C4901_01595 c4263242d05eac4c4dbac23863603cbd 306 Gene3D G3DSA:1.10.1670.40 103 298 1.7E-40 T 14-10-2018 C4901_01595 c4263242d05eac4c4dbac23863603cbd 306 SMART SM00478 136 305 5.1E-7 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C4901_01595 c4263242d05eac4c4dbac23863603cbd 306 Gene3D G3DSA:1.10.340.30 124 247 1.7E-40 T 14-10-2018 C4901_01595 c4263242d05eac4c4dbac23863603cbd 306 Pfam PF06029 AlkA N-terminal domain 8 111 7.1E-9 T 14-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal C4901_01595 c4263242d05eac4c4dbac23863603cbd 306 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 132 280 8.2E-7 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C4901_12650 8957dab8885362b714a43114e65a486d 1004 SUPERFAMILY SSF89550 5 78 1.51E-9 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C4901_12650 8957dab8885362b714a43114e65a486d 1004 SMART SM00481 5 72 9.0E-11 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal C4901_12650 8957dab8885362b714a43114e65a486d 1004 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 4 1000 12.515 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_12650 8957dab8885362b714a43114e65a486d 1004 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 140 803 1.9E-138 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_12650 8957dab8885362b714a43114e65a486d 1004 Pfam PF01336 OB-fold nucleic acid binding domain 927 992 6.9E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C4901_12650 8957dab8885362b714a43114e65a486d 1004 Gene3D G3DSA:3.20.20.140 2 245 2.1E-43 T 14-10-2018 C4901_12650 8957dab8885362b714a43114e65a486d 1004 Pfam PF02811 PHP domain 6 95 2.9E-12 T 14-10-2018 IPR004013 PHP domain GO:0003824 C4901_12650 8957dab8885362b714a43114e65a486d 1004 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 268 688 1.2E-138 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_08740 7da167660cd95abbe8c4492cd4520b4b 322 Gene3D G3DSA:1.10.3720.10 70 317 2.9E-35 T 14-10-2018 IPR035906 MetI-like superfamily C4901_08740 7da167660cd95abbe8c4492cd4520b4b 322 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 312 5.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C4901_08740 7da167660cd95abbe8c4492cd4520b4b 322 SUPERFAMILY SSF161098 9 309 2.75E-33 T 14-10-2018 IPR035906 MetI-like superfamily C4901_08740 7da167660cd95abbe8c4492cd4520b4b 322 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 6 313 1.9E-83 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 Pfam PF02910 Fumarate reductase flavoprotein C-term 445 555 9.5E-12 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 5.6E-11 T 14-10-2018 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 379 5.6E-11 T 14-10-2018 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 SUPERFAMILY SSF51905 6 409 1.52E-65 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 SUPERFAMILY SSF46977 427 553 1.2E-35 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 Pfam PF00890 FAD binding domain 11 381 6.7E-42 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 Gene3D G3DSA:3.50.50.90 331 555 1.0E-44 T 14-10-2018 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 Gene3D G3DSA:3.50.50.90 1 281 2.1E-73 T 14-10-2018 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 PIRSF PIRSF000171 1 562 3.4E-217 T 14-10-2018 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 9.6E-6 T 14-10-2018 C4901_00960 3cd7c586775c3ecdb2a713a2c9ea3fb0 577 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 372 379 9.6E-6 T 14-10-2018 C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 8 289 17.204 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 9 213 1.6E-69 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 SUPERFAMILY SSF88697 232 289 2.93E-9 T 14-10-2018 IPR015947 PUA-like superfamily C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 SUPERFAMILY SSF55120 8 216 7.2E-73 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 Gene3D G3DSA:2.30.130.10 232 294 2.6E-8 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 30 177 2.7E-47 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 Gene3D G3DSA:3.30.2350.10 2 231 5.1E-80 T 14-10-2018 C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 233 288 4.5E-13 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_04675 02728e0c8dc608c50c177f154a9b74b6 303 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 178 238 4.4E-15 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 Gene3D G3DSA:3.40.50.300 62 269 6.8E-35 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 Hamap MF_01498 DNA repair protein RadA [radA]. 20 446 41.77 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 SMART SM00382 81 234 6.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 Pfam PF13541 Subunit ChlI of Mg-chelatase 337 420 2.0E-7 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 PRINTS PR01874 DNA repair protein radA signature 114 131 1.8E-88 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 PRINTS PR01874 DNA repair protein radA signature 238 264 1.8E-88 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 PRINTS PR01874 DNA repair protein radA signature 312 335 1.8E-88 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 PRINTS PR01874 DNA repair protein radA signature 164 188 1.8E-88 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 PRINTS PR01874 DNA repair protein radA signature 9 33 1.8E-88 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 PRINTS PR01874 DNA repair protein radA signature 73 101 1.8E-88 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 PRINTS PR01874 DNA repair protein radA signature 203 231 1.8E-88 T 14-10-2018 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 SUPERFAMILY SSF52540 59 282 6.19E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 Gene3D G3DSA:3.30.230.10 330 447 1.3E-15 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 SUPERFAMILY SSF54211 245 447 1.25E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 TIGRFAM TIGR00416 sms: DNA repair protein RadA 2 442 1.4E-175 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 C4901_08725 7ba3bf106c0df894d7c6f83b54c071a3 448 Pfam PF13481 AAA domain 74 212 2.7E-10 T 14-10-2018 C4901_06315 d4a85746b1c27ea4c22b887a138fe611 199 SUPERFAMILY SSF53335 5 186 6.05E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_06315 d4a85746b1c27ea4c22b887a138fe611 199 Gene3D G3DSA:3.40.50.150 4 184 1.3E-37 T 14-10-2018 C4901_06315 d4a85746b1c27ea4c22b887a138fe611 199 Pfam PF13649 Methyltransferase domain 29 122 1.6E-16 T 14-10-2018 C4901_09490 af476ca03bc35e655cb9ed93f366e4c5 238 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 237 32.977 T 14-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C4901_09490 af476ca03bc35e655cb9ed93f366e4c5 238 SUPERFAMILY SSF64167 2 236 2.62E-75 T 14-10-2018 C4901_09490 af476ca03bc35e655cb9ed93f366e4c5 238 Pfam PF01975 Survival protein SurE 2 171 2.2E-49 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C4901_09490 af476ca03bc35e655cb9ed93f366e4c5 238 Gene3D G3DSA:3.40.1210.10 1 238 4.4E-82 T 14-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C4901_09490 af476ca03bc35e655cb9ed93f366e4c5 238 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 2 222 3.7E-60 T 14-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 C4901_04540 d29ee46c081971c03a34cfe0efb0ef59 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 1.3E-69 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_04540 d29ee46c081971c03a34cfe0efb0ef59 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 55.641 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_04540 d29ee46c081971c03a34cfe0efb0ef59 255 SUPERFAMILY SSF51351 1 249 1.44E-88 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_04540 d29ee46c081971c03a34cfe0efb0ef59 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 166 176 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_04540 d29ee46c081971c03a34cfe0efb0ef59 255 Gene3D G3DSA:3.20.20.70 1 252 1.6E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_04540 d29ee46c081971c03a34cfe0efb0ef59 255 Pfam PF00121 Triosephosphate isomerase 5 247 5.4E-85 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_11030 fe081d93c5aeec424fe001663023857d 962 Gene3D G3DSA:3.40.50.300 408 617 1.6E-36 T 14-10-2018 C4901_11030 fe081d93c5aeec424fe001663023857d 962 SUPERFAMILY SSF52540 444 590 7.14E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11030 fe081d93c5aeec424fe001663023857d 962 Gene3D G3DSA:2.30.30.940 778 840 6.4E-10 T 14-10-2018 C4901_11030 fe081d93c5aeec424fe001663023857d 962 Pfam PF08751 TrwC relaxase 15 295 1.4E-61 T 14-10-2018 IPR014862 TrwC relaxase C4901_11030 fe081d93c5aeec424fe001663023857d 962 SMART SM00382 463 591 1.9E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_11030 fe081d93c5aeec424fe001663023857d 962 Pfam PF13604 AAA domain 448 622 1.6E-48 T 14-10-2018 C4901_11030 fe081d93c5aeec424fe001663023857d 962 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 30 300 1.3E-58 T 14-10-2018 IPR014059 Conjugative relaxase, N-terminal C4901_11030 fe081d93c5aeec424fe001663023857d 962 Gene3D G3DSA:3.40.50.300 841 899 6.4E-10 T 14-10-2018 C4901_11030 fe081d93c5aeec424fe001663023857d 962 SUPERFAMILY SSF55464 4 300 1.24E-62 T 14-10-2018 C4901_11030 fe081d93c5aeec424fe001663023857d 962 SUPERFAMILY SSF52540 552 895 2.17E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11715 5f2299dab812108d930393914cdbaf62 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 1.3E-44 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C4901_11715 5f2299dab812108d930393914cdbaf62 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 4.0E-38 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C4901_11715 5f2299dab812108d930393914cdbaf62 127 PIRSF PIRSF006246 1 126 1.5E-48 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C4901_11715 5f2299dab812108d930393914cdbaf62 127 Pfam PF02261 Aspartate decarboxylase 1 114 2.0E-46 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C4901_11715 5f2299dab812108d930393914cdbaf62 127 Gene3D G3DSA:2.40.40.20 1 126 7.8E-51 T 14-10-2018 C4901_11715 5f2299dab812108d930393914cdbaf62 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 64.64 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 C4901_11715 5f2299dab812108d930393914cdbaf62 127 SUPERFAMILY SSF50692 1 116 4.22E-45 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00086 655 698 0.5 T 14-10-2018 IPR001610 PAC motif C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00086 525 567 11.0 T 14-10-2018 IPR001610 PAC motif C4901_11390 8d469082b6e556afec1327023d316144 1081 Gene3D G3DSA:1.10.287.130 706 776 1.1E-16 T 14-10-2018 C4901_11390 8d469082b6e556afec1327023d316144 1081 Pfam PF13185 GAF domain 277 426 6.8E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_11390 8d469082b6e556afec1327023d316144 1081 Gene3D G3DSA:3.40.50.2300 950 1080 9.3E-20 T 14-10-2018 C4901_11390 8d469082b6e556afec1327023d316144 1081 Gene3D G3DSA:3.30.450.20 443 565 1.4E-18 T 14-10-2018 C4901_11390 8d469082b6e556afec1327023d316144 1081 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 577 704 3.0E-16 T 14-10-2018 IPR000014 PAS domain C4901_11390 8d469082b6e556afec1327023d316144 1081 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 450 573 6.6E-12 T 14-10-2018 IPR000014 PAS domain C4901_11390 8d469082b6e556afec1327023d316144 1081 SUPERFAMILY SSF55785 564 696 4.36E-18 T 14-10-2018 IPR035965 PAS domain superfamily C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00387 818 936 6.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_11390 8d469082b6e556afec1327023d316144 1081 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 819 934 5.9E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_11390 8d469082b6e556afec1327023d316144 1081 SUPERFAMILY SSF55785 151 232 4.99E-13 T 14-10-2018 IPR035965 PAS domain superfamily C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00448 952 1069 4.5E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_11390 8d469082b6e556afec1327023d316144 1081 Pfam PF00512 His Kinase A (phospho-acceptor) domain 716 778 1.0E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_11390 8d469082b6e556afec1327023d316144 1081 SUPERFAMILY SSF47384 709 777 8.24E-7 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_11390 8d469082b6e556afec1327023d316144 1081 Pfam PF00989 PAS fold 580 695 2.8E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_11390 8d469082b6e556afec1327023d316144 1081 PRINTS PR00344 Bacterial sensor protein C-terminal signature 885 895 3.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_11390 8d469082b6e556afec1327023d316144 1081 PRINTS PR00344 Bacterial sensor protein C-terminal signature 867 881 3.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_11390 8d469082b6e556afec1327023d316144 1081 PRINTS PR00344 Bacterial sensor protein C-terminal signature 896 914 3.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_11390 8d469082b6e556afec1327023d316144 1081 PRINTS PR00344 Bacterial sensor protein C-terminal signature 920 933 3.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_11390 8d469082b6e556afec1327023d316144 1081 SUPERFAMILY SSF52172 952 1073 3.27E-19 T 14-10-2018 IPR011006 CheY-like superfamily C4901_11390 8d469082b6e556afec1327023d316144 1081 Gene3D G3DSA:3.30.450.40 256 440 7.1E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00091 453 519 0.052 T 14-10-2018 IPR000014 PAS domain C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00091 579 644 9.5E-5 T 14-10-2018 IPR000014 PAS domain C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00091 142 208 0.0042 T 14-10-2018 IPR000014 PAS domain C4901_11390 8d469082b6e556afec1327023d316144 1081 Gene3D G3DSA:3.30.565.10 782 938 1.4E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_11390 8d469082b6e556afec1327023d316144 1081 SUPERFAMILY SSF55781 262 432 1.31E-16 T 14-10-2018 C4901_11390 8d469082b6e556afec1327023d316144 1081 Pfam PF08447 PAS fold 166 231 3.3E-10 T 14-10-2018 IPR013655 PAS fold-3 GO:0005515 C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00388 713 779 2.3E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_11390 8d469082b6e556afec1327023d316144 1081 Gene3D G3DSA:3.30.450.20 568 696 8.1E-22 T 14-10-2018 C4901_11390 8d469082b6e556afec1327023d316144 1081 SUPERFAMILY SSF55785 438 565 2.09E-20 T 14-10-2018 IPR035965 PAS domain superfamily C4901_11390 8d469082b6e556afec1327023d316144 1081 Gene3D G3DSA:3.30.450.20 143 247 2.1E-15 T 14-10-2018 C4901_11390 8d469082b6e556afec1327023d316144 1081 SMART SM00065 277 435 2.3E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_11390 8d469082b6e556afec1327023d316144 1081 SUPERFAMILY SSF55874 800 933 1.7E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_11390 8d469082b6e556afec1327023d316144 1081 Pfam PF13426 PAS domain 481 565 0.25 T 14-10-2018 IPR000014 PAS domain C4901_11390 8d469082b6e556afec1327023d316144 1081 Pfam PF00072 Response regulator receiver domain 954 1069 1.1E-11 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Pfam PF09334 tRNA synthetases class I (M) 39 180 1.7E-20 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Gene3D G3DSA:3.40.50.620 34 574 2.3E-258 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 405 9.2E-69 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 SUPERFAMILY SSF50677 226 411 1.05E-49 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 817 22.611 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 SUPERFAMILY SSF52374 4 626 1.62E-151 T 14-10-2018 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Pfam PF08264 Anticodon-binding domain of tRNA 657 776 1.1E-15 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 9.4E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 489 507 9.4E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 560 570 9.4E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 9.4E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 9.4E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 9.4E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 PRINTS PR00985 Leucyl-tRNA synthetase signature 527 549 9.4E-54 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Gene3D G3DSA:2.30.210.10 575 587 2.3E-258 T 14-10-2018 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 420 617 5.9E-23 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 SUPERFAMILY SSF47323 624 816 7.29E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 574 4.0E-257 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Gene3D G3DSA:3.10.20.590 758 817 3.2E-20 T 14-10-2018 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Gene3D G3DSA:3.90.740.10 228 417 2.3E-258 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 C4901_02830 c89dc3e40ea71ee34309374aab177751 820 Gene3D G3DSA:1.10.730.10 599 754 3.0E-39 T 14-10-2018 C4901_13850 c01fffe9cabf886abc3fa4a51a0010ba 86 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 6.4E-19 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C4901_13850 c01fffe9cabf886abc3fa4a51a0010ba 86 SMART SM00834 1 41 3.5E-15 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C4901_13850 c01fffe9cabf886abc3fa4a51a0010ba 86 Pfam PF09723 Zinc ribbon domain 1 40 9.5E-14 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C4901_11000 664ce7f3e53101f69bd2ad66dc9402bd 674 Gene3D G3DSA:3.40.50.300 298 515 9.4E-38 T 14-10-2018 C4901_11000 664ce7f3e53101f69bd2ad66dc9402bd 674 Gene3D G3DSA:3.40.50.300 87 247 1.2E-19 T 14-10-2018 C4901_11000 664ce7f3e53101f69bd2ad66dc9402bd 674 SUPERFAMILY SSF52540 126 496 2.95E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11000 664ce7f3e53101f69bd2ad66dc9402bd 674 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 125 493 6.8E-70 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 SUPERFAMILY SSF52518 20 336 9.38E-121 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 Gene3D G3DSA:3.40.50.920 555 681 8.6E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 SUPERFAMILY SSF52518 365 541 4.72E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 Gene3D G3DSA:3.40.50.970 18 341 9.0E-133 T 14-10-2018 C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 Gene3D G3DSA:3.40.50.970 342 553 3.8E-81 T 14-10-2018 C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 Pfam PF02779 Transketolase, pyrimidine binding domain 369 541 2.2E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 ProSitePatterns PS00802 Transketolase signature 2. 483 499 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 20 349 4.6E-164 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 SMART SM00861 370 542 9.0E-69 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 SUPERFAMILY SSF52922 549 681 1.44E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 ProSitePatterns PS00801 Transketolase signature 1. 27 47 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 Pfam PF02780 Transketolase, C-terminal domain 566 672 4.7E-15 T 14-10-2018 IPR033248 Transketolase, C-terminal domain C4901_14480 470307ddbf12eb68399577cd3efcfb43 681 TIGRFAM TIGR00232 tktlase_bact: transketolase 21 679 3.6E-299 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 C4901_12325 7144e4a50273d682b7409b7cbe5799f3 282 Pfam PF00756 Putative esterase 25 272 3.9E-48 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 C4901_12325 7144e4a50273d682b7409b7cbe5799f3 282 SUPERFAMILY SSF53474 5 280 2.66E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_12325 7144e4a50273d682b7409b7cbe5799f3 282 Gene3D G3DSA:3.40.50.1820 5 282 2.7E-84 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_12325 7144e4a50273d682b7409b7cbe5799f3 282 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 7 279 1.5E-122 T 14-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 C4901_16145 d11b92c138dba9cd7e61d8d4e45267db 122 Gene3D G3DSA:2.40.420.20 19 96 1.3E-10 T 14-10-2018 C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 Pfam PF00390 Malic enzyme, N-terminal domain 19 113 1.9E-19 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 Pfam PF00390 Malic enzyme, N-terminal domain 116 149 6.0E-5 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 SUPERFAMILY SSF51735 163 409 2.6E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 Gene3D G3DSA:3.40.50.10380 2 160 3.7E-65 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 SMART SM01274 18 151 7.2E-72 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 SUPERFAMILY SSF53223 11 161 2.66E-50 T 14-10-2018 C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 Pfam PF03949 Malic enzyme, NAD binding domain 165 355 1.1E-22 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 SMART SM00919 163 399 3.3E-125 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 C4901_16765 d7b5f399ce8227e4ff3466fc5e34145d 420 Gene3D G3DSA:3.40.50.720 161 413 6.4E-76 T 14-10-2018 C4901_05620 96abab0b1253ae45810f10844dd50581 446 TIGRFAM TIGR00836 amt: ammonium transporter 13 432 5.4E-115 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 C4901_05620 96abab0b1253ae45810f10844dd50581 446 ProSitePatterns PS01219 Ammonium transporters signature. 175 200 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 C4901_05620 96abab0b1253ae45810f10844dd50581 446 Gene3D G3DSA:1.10.3430.10 3 444 3.0E-124 T 14-10-2018 IPR029020 Ammonium/urea transporter C4901_05620 96abab0b1253ae45810f10844dd50581 446 PRINTS PR00342 Rhesus blood group protein signature 245 267 2.4E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C4901_05620 96abab0b1253ae45810f10844dd50581 446 PRINTS PR00342 Rhesus blood group protein signature 214 232 2.4E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C4901_05620 96abab0b1253ae45810f10844dd50581 446 PRINTS PR00342 Rhesus blood group protein signature 119 135 2.4E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C4901_05620 96abab0b1253ae45810f10844dd50581 446 PRINTS PR00342 Rhesus blood group protein signature 300 318 2.4E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C4901_05620 96abab0b1253ae45810f10844dd50581 446 PRINTS PR00342 Rhesus blood group protein signature 337 353 2.4E-10 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 C4901_05620 96abab0b1253ae45810f10844dd50581 446 SUPERFAMILY SSF111352 8 414 3.79E-101 T 14-10-2018 C4901_05620 96abab0b1253ae45810f10844dd50581 446 Pfam PF00909 Ammonium Transporter Family 15 432 7.6E-89 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 C4901_08385 923c4f6bc67fe833a4a9f2c7a9fd784b 388 SUPERFAMILY SSF56436 168 383 2.02E-47 T 14-10-2018 IPR016187 C-type lectin fold C4901_08385 923c4f6bc67fe833a4a9f2c7a9fd784b 388 TIGRFAM TIGR03440 egtB_TIGR03440: ergothioneine biosynthesis protein EgtB 6 381 3.0E-76 T 14-10-2018 IPR017806 Ergothioneine biosynthesis protein EgtB GO:0052699 KEGG: 00340+1.14.99.50|MetaCyc: PWY-7255 C4901_08385 923c4f6bc67fe833a4a9f2c7a9fd784b 388 Gene3D G3DSA:3.90.1580.10 307 386 1.4E-6 T 14-10-2018 C4901_08385 923c4f6bc67fe833a4a9f2c7a9fd784b 388 Pfam PF03781 Sulfatase-modifying factor enzyme 1 173 306 3.8E-20 T 14-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 C4901_08385 923c4f6bc67fe833a4a9f2c7a9fd784b 388 Gene3D G3DSA:3.90.1580.10 170 306 4.5E-21 T 14-10-2018 C4901_08385 923c4f6bc67fe833a4a9f2c7a9fd784b 388 Gene3D G3DSA:1.20.120.450 2 145 2.9E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes C4901_08385 923c4f6bc67fe833a4a9f2c7a9fd784b 388 SUPERFAMILY SSF109854 4 136 1.1E-8 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes C4901_08385 923c4f6bc67fe833a4a9f2c7a9fd784b 388 Pfam PF12867 DinB superfamily 9 139 5.0E-13 T 14-10-2018 IPR024775 DinB-like domain C4901_15180 fa51606abab868ba7b078f508a60f047 772 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 289 732 1.3E-57 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_15180 fa51606abab868ba7b078f508a60f047 772 Gene3D G3DSA:1.20.210.10 230 755 1.6E-154 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_15180 fa51606abab868ba7b078f508a60f047 772 SUPERFAMILY SSF81442 282 748 6.67E-66 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_08265 22627d56c41abf725837f4f39f3e6beb 184 Gene3D G3DSA:3.30.70.1560 68 167 7.2E-37 T 14-10-2018 C4901_08265 22627d56c41abf725837f4f39f3e6beb 184 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 8 178 1.0E-50 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C4901_08265 22627d56c41abf725837f4f39f3e6beb 184 SUPERFAMILY SSF55120 4 178 3.04E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08265 22627d56c41abf725837f4f39f3e6beb 184 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 39 53 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 C4901_08265 22627d56c41abf725837f4f39f3e6beb 184 Pfam PF00849 RNA pseudouridylate synthase 4 148 2.3E-15 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08265 22627d56c41abf725837f4f39f3e6beb 184 Gene3D G3DSA:3.30.70.580 1 67 1.7E-25 T 14-10-2018 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 PIRSF PIRSF006076 1 761 2.0E-233 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 1 761 23.582 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Gene3D G3DSA:3.10.20.310 347 423 3.5E-23 T 14-10-2018 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Pfam PF07244 Surface antigen variable number repeat 346 420 2.7E-14 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Pfam PF07244 Surface antigen variable number repeat 265 343 9.0E-12 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Pfam PF07244 Surface antigen variable number repeat 92 171 5.4E-15 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Pfam PF07244 Surface antigen variable number repeat 175 262 1.2E-14 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Pfam PF07244 Surface antigen variable number repeat 24 78 3.1E-5 T 14-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Pfam PF01103 Surface antigen 448 761 3.6E-70 T 14-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 23 761 4.4E-242 T 14-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Gene3D G3DSA:3.10.20.310 264 345 7.8E-17 T 14-10-2018 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Gene3D G3DSA:3.10.20.310 174 263 1.6E-18 T 14-10-2018 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Gene3D G3DSA:3.10.20.310 16 90 2.4E-18 T 14-10-2018 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Gene3D G3DSA:3.10.20.310 91 172 1.8E-18 T 14-10-2018 C4901_10395 ec02c471a7ae1867f3b8d1d219c98d7a 763 Gene3D G3DSA:2.40.160.50 424 761 1.3E-97 T 14-10-2018 C4901_03730 20698b8b4590c42211e386271f4f3bc6 462 Pfam PF13638 PIN domain 8 152 2.2E-28 T 14-10-2018 IPR002716 PIN domain C4901_03730 20698b8b4590c42211e386271f4f3bc6 462 Gene3D G3DSA:3.40.50.300 244 461 6.1E-64 T 14-10-2018 C4901_03730 20698b8b4590c42211e386271f4f3bc6 462 Pfam PF02562 PhoH-like protein 246 455 2.8E-52 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 C4901_03730 20698b8b4590c42211e386271f4f3bc6 462 SUPERFAMILY SSF52540 245 441 6.04E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03730 20698b8b4590c42211e386271f4f3bc6 462 SUPERFAMILY SSF88723 6 153 5.49E-8 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_03730 20698b8b4590c42211e386271f4f3bc6 462 SMART SM00670 6 140 8.2E-7 T 14-10-2018 IPR002716 PIN domain C4901_03730 20698b8b4590c42211e386271f4f3bc6 462 Gene3D G3DSA:3.40.50.1010 113 155 4.4E-5 T 14-10-2018 C4901_03730 20698b8b4590c42211e386271f4f3bc6 462 Gene3D G3DSA:3.40.50.1010 1 74 2.2E-10 T 14-10-2018 C4901_09055 7d3b4a1986729f341e34a76589d91598 511 Pfam PF12686 Protein of unknown function (DUF3800) 310 509 3.7E-18 T 14-10-2018 IPR024524 Protein of unknown function DUF3800 C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 Pfam PF03958 Bacterial type II/III secretion system short domain 330 429 9.1E-14 T 14-10-2018 IPR005644 NolW-like C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 Pfam PF03958 Bacterial type II/III secretion system short domain 251 325 3.2E-12 T 14-10-2018 IPR005644 NolW-like C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 Gene3D G3DSA:3.30.1370.120 87 244 8.2E-53 T 14-10-2018 IPR038591 NolW-like superfamily C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 92 690 2.0E-180 T 14-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 Pfam PF00263 Bacterial type II and III secretion system protein 517 685 1.2E-49 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 Gene3D G3DSA:3.30.1370.120 248 324 9.3E-12 T 14-10-2018 IPR038591 NolW-like superfamily C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 548 558 5.0E-28 T 14-10-2018 IPR001775 GspD/PilQ family C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 429 439 5.0E-28 T 14-10-2018 IPR001775 GspD/PilQ family C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 513 537 5.0E-28 T 14-10-2018 IPR001775 GspD/PilQ family C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 649 667 5.0E-28 T 14-10-2018 IPR001775 GspD/PilQ family C4901_04955 1f3ad50ddb39e7289177b280498e4c04 751 PRINTS PR00811 Bacterial general secretion pathway protein D signature 672 686 5.0E-28 T 14-10-2018 IPR001775 GspD/PilQ family C4901_03180 cad5c1aaf3d7ede24c5fe687a5e1c184 111 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 14-10-2018 IPR019808 Histidine triad, conserved site C4901_03180 cad5c1aaf3d7ede24c5fe687a5e1c184 111 PRINTS PR00332 Histidine triad family signature 93 103 2.9E-12 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C4901_03180 cad5c1aaf3d7ede24c5fe687a5e1c184 111 PRINTS PR00332 Histidine triad family signature 5 21 2.9E-12 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C4901_03180 cad5c1aaf3d7ede24c5fe687a5e1c184 111 PRINTS PR00332 Histidine triad family signature 26 44 2.9E-12 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C4901_03180 cad5c1aaf3d7ede24c5fe687a5e1c184 111 SUPERFAMILY SSF54197 2 106 2.63E-34 T 14-10-2018 IPR036265 HIT-like superfamily C4901_03180 cad5c1aaf3d7ede24c5fe687a5e1c184 111 Gene3D G3DSA:3.30.428.10 1 108 6.5E-35 T 14-10-2018 IPR036265 HIT-like superfamily C4901_03180 cad5c1aaf3d7ede24c5fe687a5e1c184 111 Pfam PF01230 HIT domain 13 105 1.6E-21 T 14-10-2018 IPR001310 Histidine triad (HIT) protein C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 PIRSF PIRSF005303 1 317 2.0E-78 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 148 301 1.6E-9 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 Gene3D G3DSA:3.30.1330.10 1 142 7.5E-44 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 317 7.2E-97 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 SUPERFAMILY SSF55326 3 136 3.14E-32 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 Gene3D G3DSA:3.90.650.10 144 317 2.2E-48 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 SUPERFAMILY SSF56042 142 303 8.07E-38 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 317 27.684 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 C4901_11310 da5f0b667518bcaf3e8ac38cb32429ff 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 136 4.4E-24 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C4901_16475 900008f322927c8ca10a93effd59d791 397 PIRSF PIRSF000355 55 397 2.7E-123 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16475 900008f322927c8ca10a93effd59d791 397 Pfam PF00268 Ribonucleotide reductase, small chain 81 364 1.1E-78 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16475 900008f322927c8ca10a93effd59d791 397 Gene3D G3DSA:1.10.620.20 54 389 1.1E-107 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 C4901_16475 900008f322927c8ca10a93effd59d791 397 SUPERFAMILY SSF47240 80 368 8.59E-90 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_12105 3a8d050005808c744e277902643c347d 358 Pfam PF14236 Domain of unknown function (DUF4338) 4 60 2.8E-13 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_12105 3a8d050005808c744e277902643c347d 358 Pfam PF13808 DDE_Tnp_1-associated 88 180 5.2E-21 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_12105 3a8d050005808c744e277902643c347d 358 Pfam PF01609 Transposase DDE domain 190 323 5.9E-8 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_03875 a6b6864fcc1f2c6e3f60c5ebdf5129d3 316 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 24 299 2.1E-25 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal C4901_03875 a6b6864fcc1f2c6e3f60c5ebdf5129d3 316 SUPERFAMILY SSF55729 142 308 1.27E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_03875 a6b6864fcc1f2c6e3f60c5ebdf5129d3 316 Gene3D G3DSA:3.40.630.30 129 303 1.6E-60 T 14-10-2018 C4901_03875 a6b6864fcc1f2c6e3f60c5ebdf5129d3 316 Gene3D G3DSA:3.40.630.30 8 304 1.6E-60 T 14-10-2018 C4901_03875 a6b6864fcc1f2c6e3f60c5ebdf5129d3 316 SUPERFAMILY SSF55729 3 140 2.33E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_03875 a6b6864fcc1f2c6e3f60c5ebdf5129d3 316 PIRSF PIRSF018688 1 311 6.9E-66 T 14-10-2018 IPR016732 Uncharacterised conserved protein UCP018688 C4901_03265 3f5e1665f8c1c39d95e705682b9f26e7 203 Gene3D G3DSA:3.40.50.10490 7 202 5.7E-70 T 14-10-2018 C4901_03265 3f5e1665f8c1c39d95e705682b9f26e7 203 SUPERFAMILY SSF53697 13 198 3.84E-52 T 14-10-2018 C4901_03265 3f5e1665f8c1c39d95e705682b9f26e7 203 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 9 199 35.194 T 14-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 C4901_03265 3f5e1665f8c1c39d95e705682b9f26e7 203 Pfam PF13580 SIS domain 23 152 2.8E-32 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 C4901_08350 d8f0fae6479bfffb03e6b3ca57d5489f 185 PRINTS PR01798 Succinyl-CoA synthase signature 72 90 8.7E-24 T 14-10-2018 C4901_08350 d8f0fae6479bfffb03e6b3ca57d5489f 185 PRINTS PR01798 Succinyl-CoA synthase signature 103 116 8.7E-24 T 14-10-2018 C4901_08350 d8f0fae6479bfffb03e6b3ca57d5489f 185 PRINTS PR01798 Succinyl-CoA synthase signature 135 152 8.7E-24 T 14-10-2018 C4901_08350 d8f0fae6479bfffb03e6b3ca57d5489f 185 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 47 76 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site C4901_08350 d8f0fae6479bfffb03e6b3ca57d5489f 185 Gene3D G3DSA:3.40.50.261 19 183 2.5E-70 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C4901_08350 d8f0fae6479bfffb03e6b3ca57d5489f 185 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 131 144 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site C4901_08350 d8f0fae6479bfffb03e6b3ca57d5489f 185 Pfam PF00549 CoA-ligase 46 166 1.1E-18 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C4901_08350 d8f0fae6479bfffb03e6b3ca57d5489f 185 SUPERFAMILY SSF52210 18 181 5.89E-51 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C4901_12430 fecc2229741c7e7bc8295f725fc751f6 201 SUPERFAMILY SSF55068 15 187 1.57E-68 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C4901_12430 fecc2229741c7e7bc8295f725fc751f6 201 Gene3D G3DSA:3.30.1060.10 1 186 2.2E-66 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C4901_12430 fecc2229741c7e7bc8295f725fc751f6 201 Pfam PF01625 Peptide methionine sulfoxide reductase 24 175 3.9E-60 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C4901_12430 fecc2229741c7e7bc8295f725fc751f6 201 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 21 181 34.964 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C4901_12430 fecc2229741c7e7bc8295f725fc751f6 201 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 22 172 1.0E-52 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 TIGRFAM TIGR01083 nth: endonuclease III 6 194 2.7E-80 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 SMART SM00525 186 206 0.0013 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 5.8E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 3.8E-23 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 Gene3D G3DSA:1.10.1670.10 11 203 8.4E-76 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 SMART SM00478 38 185 1.2E-57 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.107 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 PIRSF PIRSF001435 4 210 3.3E-49 T 14-10-2018 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 SUPERFAMILY SSF48150 4 208 4.08E-71 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 Pfam PF00633 Helix-hairpin-helix motif 100 127 6.3E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 C4901_03890 1614ea94a11b5dd0782093c9708d173a 244 Gene3D G3DSA:1.10.340.30 21 132 8.4E-76 T 14-10-2018 C4901_15370 42ad458db2bcef1dd041b308dea3e0bf 509 SUPERFAMILY SSF52540 82 457 2.87E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15370 42ad458db2bcef1dd041b308dea3e0bf 509 Gene3D G3DSA:1.10.8.80 152 254 1.3E-121 T 14-10-2018 C4901_15370 42ad458db2bcef1dd041b308dea3e0bf 509 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 76 450 2.7E-117 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain C4901_15370 42ad458db2bcef1dd041b308dea3e0bf 509 Gene3D G3DSA:3.40.50.300 66 450 1.3E-121 T 14-10-2018 C4901_00850 0ea2a5ecddc627c337266612ec048150 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 14 31 9.0E-32 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C4901_00850 0ea2a5ecddc627c337266612ec048150 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 76 96 9.0E-32 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C4901_00850 0ea2a5ecddc627c337266612ec048150 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 100 122 9.0E-32 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C4901_00850 0ea2a5ecddc627c337266612ec048150 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 126 144 9.0E-32 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C4901_00850 0ea2a5ecddc627c337266612ec048150 155 Pfam PF02556 Preprotein translocase subunit SecB 9 144 3.6E-47 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C4901_00850 0ea2a5ecddc627c337266612ec048150 155 Gene3D G3DSA:3.10.420.10 2 154 6.2E-51 T 14-10-2018 IPR035958 SecB-like superfamily C4901_00850 0ea2a5ecddc627c337266612ec048150 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 148 29.719 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C4901_00850 0ea2a5ecddc627c337266612ec048150 155 SUPERFAMILY SSF54611 4 144 5.67E-44 T 14-10-2018 IPR035958 SecB-like superfamily C4901_00850 0ea2a5ecddc627c337266612ec048150 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 9 147 2.4E-48 T 14-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 Pfam PF00512 His Kinase A (phospho-acceptor) domain 197 262 2.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 Gene3D G3DSA:3.30.565.10 293 444 8.3E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_12285 9c318a7d61b228072078a8ef913404ea 445 Gene3D G3DSA:3.30.450.20 16 178 2.0E-14 T 14-10-2018 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 399 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 439 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 420 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 385 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 53 174 7.4E-10 T 14-10-2018 IPR000014 PAS domain C4901_12285 9c318a7d61b228072078a8ef913404ea 445 SUPERFAMILY SSF55785 56 161 2.37E-13 T 14-10-2018 IPR035965 PAS domain superfamily C4901_12285 9c318a7d61b228072078a8ef913404ea 445 Pfam PF08448 PAS fold 63 170 6.1E-10 T 14-10-2018 IPR013656 PAS fold-4 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 SUPERFAMILY SSF55874 278 440 4.45E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_12285 9c318a7d61b228072078a8ef913404ea 445 SUPERFAMILY SSF47384 192 230 3.92E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 SMART SM00091 56 122 1.6E-6 T 14-10-2018 IPR000014 PAS domain C4901_12285 9c318a7d61b228072078a8ef913404ea 445 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 333 441 2.8E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_12285 9c318a7d61b228072078a8ef913404ea 445 Gene3D G3DSA:1.10.287.130 179 287 3.8E-23 T 14-10-2018 C4901_12285 9c318a7d61b228072078a8ef913404ea 445 SMART SM00387 332 442 1.2E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_05910 438c606c01c9cad0a6b94c773439090e 227 Gene3D G3DSA:3.40.50.1820 1 224 3.5E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_05910 438c606c01c9cad0a6b94c773439090e 227 SUPERFAMILY SSF53474 2 226 2.61E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_05910 438c606c01c9cad0a6b94c773439090e 227 Pfam PF01738 Dienelactone hydrolase family 13 225 1.2E-54 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 C4901_01725 47459cb0a20f4566c433efabf2ed2807 160 Gene3D G3DSA:3.40.1280.10 1 160 1.7E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C4901_01725 47459cb0a20f4566c433efabf2ed2807 160 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 8 157 34.15 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 C4901_01725 47459cb0a20f4566c433efabf2ed2807 160 SUPERFAMILY SSF75217 8 158 1.44E-43 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C4901_01725 47459cb0a20f4566c433efabf2ed2807 160 Pfam PF00588 SpoU rRNA Methylase family 8 147 1.4E-30 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C4901_01725 47459cb0a20f4566c433efabf2ed2807 160 PIRSF PIRSF029256 7 159 7.7E-63 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 C4901_05805 23080caaa2e475aada4967225bf6ea8d 272 Pfam PF02634 FdhD/NarQ family 33 268 1.2E-60 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 C4901_05805 23080caaa2e475aada4967225bf6ea8d 272 PIRSF PIRSF015626 6 271 3.1E-62 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 C4901_05805 23080caaa2e475aada4967225bf6ea8d 272 SUPERFAMILY SSF53927 24 268 2.05E-61 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C4901_05805 23080caaa2e475aada4967225bf6ea8d 272 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 28 269 1.5E-44 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 C4901_05805 23080caaa2e475aada4967225bf6ea8d 272 Gene3D G3DSA:3.10.20.10 34 114 3.3E-7 T 14-10-2018 C4901_05805 23080caaa2e475aada4967225bf6ea8d 272 Gene3D G3DSA:3.40.140.10 130 272 5.7E-40 T 14-10-2018 C4901_05805 23080caaa2e475aada4967225bf6ea8d 272 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 7 269 28.192 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 C4901_08130 a4ab229249725100cd0fed21c1be217b 250 Gene3D G3DSA:3.90.350.10 5 140 2.0E-29 T 14-10-2018 IPR014736 Transposase, Tn5-like, core C4901_08130 a4ab229249725100cd0fed21c1be217b 250 Gene3D G3DSA:1.10.740.10 142 245 2.0E-9 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal C4901_08130 a4ab229249725100cd0fed21c1be217b 250 Pfam PF02281 Transposase Tn5 dimerisation domain 197 236 1.1E-7 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation C4901_08130 a4ab229249725100cd0fed21c1be217b 250 Pfam PF01609 Transposase DDE domain 50 154 1.1E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_08130 a4ab229249725100cd0fed21c1be217b 250 SUPERFAMILY SSF53098 2 240 8.34E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 1.9E-7 T 14-10-2018 C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.9E-7 T 14-10-2018 C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.9E-7 T 14-10-2018 C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 SUPERFAMILY SSF51971 1 340 3.53E-24 T 14-10-2018 C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 330 4.1E-19 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 Gene3D G3DSA:3.50.50.60 2 156 9.5E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.8E-9 T 14-10-2018 C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 2.8E-9 T 14-10-2018 C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 2.8E-9 T 14-10-2018 C4901_12970 8f5e831c9a9ab377440102c9afdc64bc 349 Gene3D G3DSA:3.50.50.60 192 341 1.6E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_14645 145b50bb50aca8142172920b4f88225b 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 249 2.9E-24 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C4901_14645 145b50bb50aca8142172920b4f88225b 258 SUPERFAMILY SSF56219 2 258 7.07E-76 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C4901_14645 145b50bb50aca8142172920b4f88225b 258 Gene3D G3DSA:3.60.10.10 1 258 4.9E-84 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C4901_14645 145b50bb50aca8142172920b4f88225b 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 2 256 1.7E-75 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 C4901_14645 145b50bb50aca8142172920b4f88225b 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 2 254 9.1E-68 T 14-10-2018 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Pfam PF03483 B3/4 domain 210 382 5.5E-57 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Gene3D G3DSA:3.30.56.10 400 473 8.8E-23 T 14-10-2018 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Pfam PF01588 Putative tRNA binding domain 45 143 2.1E-19 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 SUPERFAMILY SSF54991 689 786 1.23E-27 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Gene3D G3DSA:3.30.930.10 486 682 5.8E-45 T 14-10-2018 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 SUPERFAMILY SSF50249 39 192 4.0E-40 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Gene3D G3DSA:2.40.50.140 39 152 3.6E-56 T 14-10-2018 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Gene3D G3DSA:3.30.70.380 694 787 5.5E-27 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 SMART SM00873 209 382 7.2E-72 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Pfam PF03484 tRNA synthetase B5 domain 403 468 5.9E-17 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 SUPERFAMILY SSF55681 464 679 6.36E-37 T 14-10-2018 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 SUPERFAMILY SSF46955 402 472 1.01E-17 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Pfam PF03147 Ferredoxin-fold anticodon binding domain 693 786 6.2E-27 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Gene3D G3DSA:3.30.56.10 6 179 3.6E-56 T 14-10-2018 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Gene3D G3DSA:3.50.40.10 197 391 9.5E-70 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 SMART SM00874 400 468 2.1E-22 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 780 38.747 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 SMART SM00896 693 786 1.0E-40 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 SUPERFAMILY SSF56037 196 388 8.37E-61 T 14-10-2018 C4901_05590 0f3a321d2d7e0344af48934159e9468b 787 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 786 7.9E-207 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C4901_05015 6bd9c00a51c603b4b24a812111ea50f4 172 SUPERFAMILY SSF88946 11 98 3.73E-19 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C4901_05015 6bd9c00a51c603b4b24a812111ea50f4 172 SUPERFAMILY SSF88659 109 170 3.74E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_05015 6bd9c00a51c603b4b24a812111ea50f4 172 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 170 2.4E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C4901_05015 6bd9c00a51c603b4b24a812111ea50f4 172 Pfam PF08281 Sigma-70, region 4 115 164 9.4E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_05015 6bd9c00a51c603b4b24a812111ea50f4 172 Gene3D G3DSA:1.10.10.10 109 171 8.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_05015 6bd9c00a51c603b4b24a812111ea50f4 172 Gene3D G3DSA:1.10.1740.10 7 88 2.3E-15 T 14-10-2018 C4901_05015 6bd9c00a51c603b4b24a812111ea50f4 172 Pfam PF04542 Sigma-70 region 2 25 84 1.9E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C4901_00430 43f6a84c4da4b636e8e6af49ff810174 179 Gene3D G3DSA:2.60.120.10 1 171 4.8E-48 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_00430 43f6a84c4da4b636e8e6af49ff810174 179 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 176 29.764 T 14-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 C4901_00430 43f6a84c4da4b636e8e6af49ff810174 179 Pfam PF03079 ARD/ARD' family 73 169 9.2E-22 T 14-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 C4901_00430 43f6a84c4da4b636e8e6af49ff810174 179 SUPERFAMILY SSF51182 13 175 1.39E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_16865 d32ae3d3887a94dda134f7352084d446 164 SUPERFAMILY SSF51206 11 146 6.02E-28 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C4901_16865 d32ae3d3887a94dda134f7352084d446 164 SMART SM00100 18 136 9.1E-14 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C4901_16865 d32ae3d3887a94dda134f7352084d446 164 Pfam PF00027 Cyclic nucleotide-binding domain 37 120 7.6E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C4901_16865 d32ae3d3887a94dda134f7352084d446 164 Gene3D G3DSA:2.60.120.10 1 151 7.1E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_14920 927e0a56c4934293dea6df4163ed5ad6 175 Gene3D G3DSA:1.20.120.450 1 164 9.2E-18 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes C4901_14920 927e0a56c4934293dea6df4163ed5ad6 175 SUPERFAMILY SSF109854 17 167 1.68E-17 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes C4901_14920 927e0a56c4934293dea6df4163ed5ad6 175 Pfam PF07609 Protein of unknown function (DUF1572) 11 156 8.1E-7 T 14-10-2018 IPR011466 Protein of unknown function DUF1572 C4901_09895 9376f2d7cbbe49d40dc2eaf448f294f7 69 SUPERFAMILY SSF55008 2 67 8.51E-21 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 C4901_09895 9376f2d7cbbe49d40dc2eaf448f294f7 69 Gene3D G3DSA:3.30.70.100 3 68 2.4E-25 T 14-10-2018 C4901_09895 9376f2d7cbbe49d40dc2eaf448f294f7 69 Pfam PF00403 Heavy-metal-associated domain 5 63 3.3E-18 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 C4901_09895 9376f2d7cbbe49d40dc2eaf448f294f7 69 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 Gene3D G3DSA:3.40.190.10 110 210 1.4E-78 T 14-10-2018 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 16 223 8.4E-74 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 SUPERFAMILY SSF54782 231 318 7.72E-23 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 Gene3D G3DSA:3.40.190.10 16 226 1.4E-78 T 14-10-2018 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 PIRSF PIRSF001438 2 320 9.7E-112 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 236 291 7.2E-13 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 SUPERFAMILY SSF53850 15 229 2.0E-76 T 14-10-2018 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 16 303 4.3E-101 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 PRINTS PR00151 Porphobilinogen deaminase signature 154 171 5.9E-39 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 PRINTS PR00151 Porphobilinogen deaminase signature 55 75 5.9E-39 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 PRINTS PR00151 Porphobilinogen deaminase signature 135 152 5.9E-39 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 PRINTS PR00151 Porphobilinogen deaminase signature 86 105 5.9E-39 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 PRINTS PR00151 Porphobilinogen deaminase signature 241 258 5.9E-39 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 15 308 35.96 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02170 ec8de7654e0beaf4705ae0a26ef4d279 322 Gene3D G3DSA:3.30.160.40 232 317 2.8E-23 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_13330 e6e9545e1415c0f128b8c7ebb50ff5b9 358 TIGRFAM TIGR02714 amido_AtzD_TrzD: ring-opening amidohydrolases 4 356 2.1E-85 T 14-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 C4901_13330 e6e9545e1415c0f128b8c7ebb50ff5b9 358 Gene3D G3DSA:3.30.1330.180 106 242 7.7E-31 T 14-10-2018 C4901_13330 e6e9545e1415c0f128b8c7ebb50ff5b9 358 Hamap MF_01989 Cyanuric acid amidohydrolase. 1 357 30.945 T 14-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 C4901_13330 e6e9545e1415c0f128b8c7ebb50ff5b9 358 Gene3D G3DSA:3.30.1330.160 244 358 4.5E-40 T 14-10-2018 C4901_13330 e6e9545e1415c0f128b8c7ebb50ff5b9 358 Pfam PF09663 Amidohydrolase ring-opening protein (Amido_AtzD_TrzD) 5 356 4.2E-119 T 14-10-2018 IPR014086 Cyanuric acid hydrolase/Barbiturase GO:0016812 C4901_13330 e6e9545e1415c0f128b8c7ebb50ff5b9 358 Gene3D G3DSA:3.30.1330.170 1 105 4.6E-32 T 14-10-2018 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 351 419 1.6E-31 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 Gene3D G3DSA:1.10.8.60 273 343 4.9E-24 T 14-10-2018 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 Pfam PF11638 DnaA N-terminal domain 5 65 6.2E-20 T 14-10-2018 IPR024633 DnaA N-terminal domain C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 7 439 7.5E-178 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 Gene3D G3DSA:3.30.300.180 4 106 1.3E-28 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 Gene3D G3DSA:3.40.50.300 107 272 6.4E-45 T 14-10-2018 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 4 441 32.617 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 Pfam PF00308 Bacterial dnaA protein 107 324 2.2E-92 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 SUPERFAMILY SSF48295 338 440 1.31E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 SMART SM00760 350 419 2.5E-41 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 SUPERFAMILY SSF52540 106 318 9.37E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 204 218 1.5E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 140 160 1.5E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 400 419 1.5E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 172 186 1.5E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 238 265 1.5E-49 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 Gene3D G3DSA:1.10.1750.10 349 442 1.4E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 ProSitePatterns PS01008 DnaA protein signature. 400 419 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 C4901_00010 37fdfdfe1878aeb6044869c26ce107d0 442 SMART SM00382 139 273 3.0E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 204 4.1E-101 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 SUPERFAMILY SSF52096 23 205 4.82E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 15 205 43.818 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 PRINTS PR00127 Clp protease catalytic subunit P signature 31 46 1.2E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 PRINTS PR00127 Clp protease catalytic subunit P signature 123 142 1.2E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 PRINTS PR00127 Clp protease catalytic subunit P signature 102 119 1.2E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 PRINTS PR00127 Clp protease catalytic subunit P signature 71 91 1.2E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 PRINTS PR00127 Clp protease catalytic subunit P signature 180 199 1.2E-51 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 124 137 - T 14-10-2018 IPR033135 ClpP, histidine active site C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 Pfam PF00574 Clp protease 25 204 8.1E-87 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 102 113 - T 14-10-2018 IPR018215 ClpP, Ser active site C4901_05780 6cfcb1eafe0554c708b573c5946883e7 206 Gene3D G3DSA:3.90.226.10 7 206 1.3E-83 T 14-10-2018 C4901_02855 7714eb8ed8dcacd56f248f710ea26e4c 119 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 4 101 1.9E-34 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS C4901_02855 7714eb8ed8dcacd56f248f710ea26e4c 119 SUPERFAMILY SSF81301 3 103 9.32E-35 T 14-10-2018 C4901_02855 7714eb8ed8dcacd56f248f710ea26e4c 119 Gene3D G3DSA:3.30.460.10 1 113 2.7E-35 T 14-10-2018 C4901_02855 7714eb8ed8dcacd56f248f710ea26e4c 119 Pfam PF02410 Ribosomal silencing factor during starvation 6 101 5.5E-26 T 14-10-2018 C4901_02855 7714eb8ed8dcacd56f248f710ea26e4c 119 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 102 22.216 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS C4901_01340 998d76f59fd68f89a8e21e6db0da1118 117 SUPERFAMILY SSF46626 9 105 3.98E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_01340 998d76f59fd68f89a8e21e6db0da1118 117 PRINTS PR00607 Class IE cytochrome C signature 35 46 6.0E-12 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C4901_01340 998d76f59fd68f89a8e21e6db0da1118 117 PRINTS PR00607 Class IE cytochrome C signature 46 56 6.0E-12 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C4901_01340 998d76f59fd68f89a8e21e6db0da1118 117 PRINTS PR00607 Class IE cytochrome C signature 77 89 6.0E-12 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C4901_01340 998d76f59fd68f89a8e21e6db0da1118 117 PRINTS PR00607 Class IE cytochrome C signature 92 103 6.0E-12 T 14-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 C4901_01340 998d76f59fd68f89a8e21e6db0da1118 117 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 25 102 1.9E-12 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_01340 998d76f59fd68f89a8e21e6db0da1118 117 Gene3D G3DSA:1.10.760.10 23 106 6.6E-29 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_10875 b3d1bebf80dc6070d414f8dda5f95725 261 SUPERFAMILY SSF75217 14 173 1.24E-35 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C4901_10875 b3d1bebf80dc6070d414f8dda5f95725 261 Pfam PF00588 SpoU rRNA Methylase family 18 167 4.8E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 C4901_10875 b3d1bebf80dc6070d414f8dda5f95725 261 PIRSF PIRSF004808 13 252 5.2E-72 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 C4901_10875 b3d1bebf80dc6070d414f8dda5f95725 261 Gene3D G3DSA:1.10.8.590 185 247 1.8E-22 T 14-10-2018 C4901_10875 b3d1bebf80dc6070d414f8dda5f95725 261 Gene3D G3DSA:3.40.1280.10 14 177 6.5E-60 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C4901_10875 b3d1bebf80dc6070d414f8dda5f95725 261 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 17 246 7.0E-63 T 14-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.903 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 SUPERFAMILY SSF54821 108 206 2.62E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 SUPERFAMILY SSF54814 2 106 1.81E-33 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 4.3E-41 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 Gene3D G3DSA:3.30.300.20 17 107 4.0E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 Gene3D G3DSA:3.30.1140.32 108 208 8.0E-45 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 Pfam PF07650 KH domain 38 111 1.1E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 SMART SM00322 60 125 1.4E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C4901_14095 d1d64763d8703d8ec3c8045414fa610a 225 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 210 8.4E-92 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 C4901_03635 a99d50594e81f590a845bbc466a056f3 500 Pfam PF01609 Transposase DDE domain 338 474 3.5E-5 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 Pfam PF00318 Ribosomal protein S2 9 225 1.5E-88 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 SUPERFAMILY SSF52313 6 229 7.59E-88 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 159 183 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 4 227 5.2E-97 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 Gene3D G3DSA:3.40.50.10490 8 220 2.0E-84 T 14-10-2018 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 Gene3D G3DSA:1.10.287.610 103 151 2.0E-84 T 14-10-2018 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 40.035 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 PRINTS PR00395 Ribosomal protein S2 signature 197 211 3.2E-35 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 PRINTS PR00395 Ribosomal protein S2 signature 159 176 3.2E-35 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 PRINTS PR00395 Ribosomal protein S2 signature 176 187 3.2E-35 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.2E-35 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.2E-35 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_10435 f9431ea4b79b4db60ad4355f8ca6ad15 303 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.2E-35 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_16055 2e2f91f818d36ce8c99aabf0192163fa 75 SMART SM00966 1 46 3.4E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_16055 2e2f91f818d36ce8c99aabf0192163fa 75 SUPERFAMILY SSF89447 1 43 6.63E-10 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_16055 2e2f91f818d36ce8c99aabf0192163fa 75 Gene3D G3DSA:2.10.260.10 1 39 1.7E-9 T 14-10-2018 C4901_16055 2e2f91f818d36ce8c99aabf0192163fa 75 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 2 45 1.8E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_16055 2e2f91f818d36ce8c99aabf0192163fa 75 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 2 41 4.2E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_04070 6aefe0ce62faa8442abef24f292b1e03 241 Gene3D G3DSA:3.40.1260.10 119 240 2.1E-23 T 14-10-2018 IPR027396 DsrEFH-like C4901_04070 6aefe0ce62faa8442abef24f292b1e03 241 SUPERFAMILY SSF75169 122 239 1.41E-12 T 14-10-2018 IPR027396 DsrEFH-like C4901_08830 44b15f655a6acf1cef22a17745224676 315 Gene3D G3DSA:3.40.366.10 9 288 1.7E-93 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 C4901_08830 44b15f655a6acf1cef22a17745224676 315 Gene3D G3DSA:3.30.70.250 128 200 1.7E-93 T 14-10-2018 C4901_08830 44b15f655a6acf1cef22a17745224676 315 Pfam PF00698 Acyl transferase domain 9 268 7.2E-37 T 14-10-2018 IPR014043 Acyl transferase C4901_08830 44b15f655a6acf1cef22a17745224676 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 10 315 4.8E-33 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain C4901_08830 44b15f655a6acf1cef22a17745224676 315 SUPERFAMILY SSF55048 131 200 6.02E-16 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding C4901_08830 44b15f655a6acf1cef22a17745224676 315 PIRSF PIRSF000446 5 313 3.2E-106 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 C4901_08830 44b15f655a6acf1cef22a17745224676 315 SUPERFAMILY SSF52151 8 308 1.46E-68 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C4901_08830 44b15f655a6acf1cef22a17745224676 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 7 293 4.0E-104 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 C4901_08195 d68b92162c5f0b2a0cd1afef709726ac 107 Pfam PF12112 Protein of unknown function (DUF3579) 6 88 2.6E-32 T 14-10-2018 IPR021969 Protein of unknown function DUF3579 C4901_08195 d68b92162c5f0b2a0cd1afef709726ac 107 Gene3D G3DSA:3.30.70.2340 2 100 2.7E-33 T 14-10-2018 C4901_08040 5837faa7653cf56b5d05b8a4a64b1a95 258 Gene3D G3DSA:3.40.1280.10 12 177 3.6E-62 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C4901_08040 5837faa7653cf56b5d05b8a4a64b1a95 258 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 37 233 3.6E-59 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C4901_08040 5837faa7653cf56b5d05b8a4a64b1a95 258 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 16 245 1.5E-87 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C4901_08040 5837faa7653cf56b5d05b8a4a64b1a95 258 SUPERFAMILY SSF75217 16 256 3.2E-93 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C4901_08040 5837faa7653cf56b5d05b8a4a64b1a95 258 Gene3D G3DSA:1.10.1270.20 178 258 7.2E-34 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C4901_08040 5837faa7653cf56b5d05b8a4a64b1a95 258 PIRSF PIRSF000386 15 257 3.2E-94 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C4901_08040 5837faa7653cf56b5d05b8a4a64b1a95 258 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 258 102.464 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 SUPERFAMILY SSF50104 2 113 1.91E-47 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 4.4E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 Gene3D G3DSA:2.30.30.790 5 114 4.0E-15 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.269 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 Pfam PF01245 Ribosomal protein L19 3 113 2.0E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 PRINTS PR00061 Ribosomal protein L19 signature 34 63 5.4E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 PRINTS PR00061 Ribosomal protein L19 signature 4 33 5.4E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 PRINTS PR00061 Ribosomal protein L19 signature 88 113 5.4E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 PIRSF PIRSF002191 1 114 2.8E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08045 7a94d7f8ee5b6885a38f62e7b81c0cb0 114 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_03120 31fc09e3882611b4e5891c27560ca364 72 PIRSF PIRSF003113 1 72 3.3E-21 T 14-10-2018 IPR002634 BolA protein C4901_03120 31fc09e3882611b4e5891c27560ca364 72 Pfam PF01722 BolA-like protein 22 70 5.1E-18 T 14-10-2018 IPR002634 BolA protein C4901_03120 31fc09e3882611b4e5891c27560ca364 72 Gene3D G3DSA:3.30.300.90 2 72 3.2E-28 T 14-10-2018 C4901_03120 31fc09e3882611b4e5891c27560ca364 72 SUPERFAMILY SSF82657 1 69 1.83E-24 T 14-10-2018 IPR036065 BolA-like superfamily C4901_08365 47fbe2c4d56522b61dacb8356583630f 305 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08365 47fbe2c4d56522b61dacb8356583630f 305 SUPERFAMILY SSF55174 18 73 7.36E-6 T 14-10-2018 C4901_08365 47fbe2c4d56522b61dacb8356583630f 305 SUPERFAMILY SSF55120 76 300 3.96E-75 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08365 47fbe2c4d56522b61dacb8356583630f 305 Gene3D G3DSA:3.10.290.10 5 69 3.8E-14 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C4901_08365 47fbe2c4d56522b61dacb8356583630f 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 300 3.0E-87 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08365 47fbe2c4d56522b61dacb8356583630f 305 Pfam PF00849 RNA pseudouridylate synthase 92 240 6.3E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08365 47fbe2c4d56522b61dacb8356583630f 305 Gene3D G3DSA:3.30.2350.10 83 303 1.4E-70 T 14-10-2018 C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 Gene3D G3DSA:1.10.8.630 3 108 7.2E-30 T 14-10-2018 C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 Pfam PF00270 DEAD/DEAH box helicase 210 353 1.2E-9 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 Gene3D G3DSA:3.40.50.300 180 370 1.2E-71 T 14-10-2018 C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 SUPERFAMILY SSF52540 188 365 2.12E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 719 23.902 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 SMART SM00487 186 375 9.5E-15 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 SUPERFAMILY SSF52540 211 607 3.58E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 TIGRFAM TIGR00595 priA: primosomal protein N' 212 717 1.6E-180 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 Pfam PF00271 Helicase conserved C-terminal domain 496 578 2.9E-6 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_16265 1547c41e9b7e43706c0b207f79b4d767 720 SMART SM00490 483 580 4.7E-6 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_16120 3f96a54518e15b42e4a80041a61a3173 78 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 14-10-2018 IPR001455 TusA-like domain C4901_16120 3f96a54518e15b42e4a80041a61a3173 78 SUPERFAMILY SSF64307 3 77 2.88E-25 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_16120 3f96a54518e15b42e4a80041a61a3173 78 Pfam PF01206 Sulfurtransferase TusA 9 77 1.7E-25 T 14-10-2018 IPR001455 TusA-like domain C4901_16120 3f96a54518e15b42e4a80041a61a3173 78 Gene3D G3DSA:3.30.110.40 3 78 1.7E-29 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Gene3D G3DSA:1.10.10.10 530 613 1.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Pfam PF03979 Sigma-70 factor, region 1.1 5 83 1.4E-26 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 1 613 43.898 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Pfam PF00140 Sigma-70 factor, region 1.2 102 132 3.3E-13 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 573 599 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Pfam PF04542 Sigma-70 region 2 380 449 1.7E-21 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 376 612 5.3E-120 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Gene3D G3DSA:1.10.10.10 453 529 7.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 PRINTS PR00046 Major sigma-70 factor signature 404 417 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 PRINTS PR00046 Major sigma-70 factor signature 428 436 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 PRINTS PR00046 Major sigma-70 factor signature 552 564 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 PRINTS PR00046 Major sigma-70 factor signature 573 588 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 PRINTS PR00046 Major sigma-70 factor signature 588 599 3.0E-31 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 SUPERFAMILY SSF88659 453 526 7.1E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Gene3D G3DSA:1.10.220.120 1 65 7.9E-26 T 14-10-2018 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Pfam PF04546 Sigma-70, non-essential region 143 349 3.7E-60 T 14-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 376 601 5.7E-38 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 SUPERFAMILY SSF88659 510 612 6.32E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Pfam PF04545 Sigma-70, region 4 549 601 9.2E-20 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Pfam PF04539 Sigma-70 region 3 459 535 1.2E-29 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 404 417 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 Gene3D G3DSA:1.10.601.10 117 449 4.9E-128 T 14-10-2018 C4901_15760 5c1e7c5f40eb8feb6dad994c8aac204d 614 SUPERFAMILY SSF88946 119 447 1.57E-97 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 Pfam PF00490 Delta-aminolevulinic acid dehydratase 13 333 4.8E-136 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 SMART SM01004 10 334 1.9E-222 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 SUPERFAMILY SSF51569 7 336 7.33E-138 T 14-10-2018 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 130 144 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 161 180 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 199 218 2.5E-56 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 PIRSF PIRSF001415 3 337 6.1E-144 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 C4901_01020 cd455e480ba0333dbb9afda23cfce797 340 Gene3D G3DSA:3.20.20.70 1 338 7.4E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_09310 9454268e6f7fd5095d320a02dd600799 77 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 42 2.8E-13 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_09310 9454268e6f7fd5095d320a02dd600799 77 Gene3D G3DSA:3.40.1620.10 1 39 1.8E-12 T 14-10-2018 C4901_09310 9454268e6f7fd5095d320a02dd600799 77 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 42 1.9E-12 T 14-10-2018 C4901_09310 9454268e6f7fd5095d320a02dd600799 77 SUPERFAMILY SSF143120 1 46 6.41E-12 T 14-10-2018 IPR036165 YefM-like superfamily C4901_07990 5a074c458387a2c0e72909cce17ccc89 211 SUPERFAMILY SSF55821 1 204 1.28E-58 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C4901_07990 5a074c458387a2c0e72909cce17ccc89 211 Pfam PF01300 Telomere recombination 23 198 5.7E-41 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C4901_07990 5a074c458387a2c0e72909cce17ccc89 211 Gene3D G3DSA:3.90.870.10 1 206 3.5E-59 T 14-10-2018 C4901_07990 5a074c458387a2c0e72909cce17ccc89 211 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 8 201 1.1E-54 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 SMART SM00382 156 299 1.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_05095 eb6117792698ddb486b99630c9879dc4 454 Pfam PF00158 Sigma-54 interaction domain 137 302 8.2E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 SUPERFAMILY SSF52540 136 375 9.15E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05095 eb6117792698ddb486b99630c9879dc4 454 SUPERFAMILY SSF46689 347 453 1.43E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 SUPERFAMILY SSF52172 5 180 2.28E-39 T 14-10-2018 IPR011006 CheY-like superfamily C4901_05095 eb6117792698ddb486b99630c9879dc4 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 417 434 9.9E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 434 454 9.9E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 Pfam PF02954 Bacterial regulatory protein, Fis family 411 451 2.1E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 SMART SM00448 4 115 8.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 Gene3D G3DSA:1.10.10.60 384 454 1.2E-16 T 14-10-2018 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 Gene3D G3DSA:3.40.50.2300 2 126 4.7E-30 T 14-10-2018 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 Gene3D G3DSA:3.40.50.300 127 306 7.8E-59 T 14-10-2018 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 Pfam PF00072 Response regulator receiver domain 6 115 2.4E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 Gene3D G3DSA:1.10.8.60 307 381 2.2E-20 T 14-10-2018 C4901_05095 eb6117792698ddb486b99630c9879dc4 454 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 346 355 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 Gene3D G3DSA:3.40.50.1220 181 345 5.1E-44 T 14-10-2018 C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 Gene3D G3DSA:3.40.50.970 1 178 2.4E-63 T 14-10-2018 C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 413 432 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 SUPERFAMILY SSF52518 2 174 5.89E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 376 522 3.8E-42 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 2 166 1.6E-52 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 Gene3D G3DSA:3.40.50.970 349 539 4.1E-59 T 14-10-2018 C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 319 3.8E-32 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 SUPERFAMILY SSF52518 353 539 1.9E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_16855 4994223ce7e2eaf25dbd5680fffe8d08 543 SUPERFAMILY SSF52467 179 359 9.63E-44 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C4901_01715 2021df790882ffe76ec5eddb6e471f2d 329 Pfam PF00107 Zinc-binding dehydrogenase 158 272 1.0E-13 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C4901_01715 2021df790882ffe76ec5eddb6e471f2d 329 Gene3D G3DSA:3.40.50.720 125 292 3.3E-100 T 14-10-2018 C4901_01715 2021df790882ffe76ec5eddb6e471f2d 329 Gene3D G3DSA:3.90.180.10 28 322 3.3E-100 T 14-10-2018 C4901_01715 2021df790882ffe76ec5eddb6e471f2d 329 SUPERFAMILY SSF50129 8 143 1.3E-28 T 14-10-2018 IPR011032 GroES-like superfamily C4901_01715 2021df790882ffe76ec5eddb6e471f2d 329 SUPERFAMILY SSF51735 116 289 4.92E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_01715 2021df790882ffe76ec5eddb6e471f2d 329 SMART SM00829 21 322 0.0021 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C4901_01715 2021df790882ffe76ec5eddb6e471f2d 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 7 324 1.8E-112 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 1.1E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 2.4E-44 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 2.7E-34 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 2.7E-34 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 2.7E-34 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 2.7E-34 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Gene3D G3DSA:1.10.8.60 653 751 1.1E-27 T 14-10-2018 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 SUPERFAMILY SSF81923 1 141 1.31E-59 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Gene3D G3DSA:1.10.1780.10 1 142 1.5E-42 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 733 0.0 T 14-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Gene3D G3DSA:3.40.50.300 439 651 5.6E-74 T 14-10-2018 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Gene3D G3DSA:3.40.50.300 167 355 4.3E-65 T 14-10-2018 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 SMART SM01086 653 742 8.3E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 SUPERFAMILY SSF52540 172 421 2.25E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Gene3D G3DSA:1.10.8.60 356 438 5.7E-34 T 14-10-2018 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 SUPERFAMILY SSF52540 437 747 2.89E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 SMART SM00382 487 654 4.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 SMART SM00382 206 351 2.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 6.7E-16 T 14-10-2018 IPR004176 Clp, N-terminal C4901_08300 bca744f8317663e042ea36bd59c0a50e 753 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 327 2.6E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_05060 e5e60431d43ac0711f7c115686b3fc0c 425 Gene3D G3DSA:1.20.81.30 274 385 8.6E-27 T 14-10-2018 C4901_05060 e5e60431d43ac0711f7c115686b3fc0c 425 Pfam PF00482 Type II secretion system (T2SS), protein F 88 210 8.3E-29 T 14-10-2018 IPR018076 Type II secretion system F domain C4901_05060 e5e60431d43ac0711f7c115686b3fc0c 425 Pfam PF00482 Type II secretion system (T2SS), protein F 291 413 5.5E-25 T 14-10-2018 IPR018076 Type II secretion system F domain C4901_05060 e5e60431d43ac0711f7c115686b3fc0c 425 PRINTS PR00812 Bacterial general secretion pathway protein F signature 402 421 1.2E-16 T 14-10-2018 IPR003004 GspF/PilC family C4901_05060 e5e60431d43ac0711f7c115686b3fc0c 425 PRINTS PR00812 Bacterial general secretion pathway protein F signature 386 400 1.2E-16 T 14-10-2018 IPR003004 GspF/PilC family C4901_05060 e5e60431d43ac0711f7c115686b3fc0c 425 PRINTS PR00812 Bacterial general secretion pathway protein F signature 182 210 1.2E-16 T 14-10-2018 IPR003004 GspF/PilC family C4901_05060 e5e60431d43ac0711f7c115686b3fc0c 425 PRINTS PR00812 Bacterial general secretion pathway protein F signature 83 95 1.2E-16 T 14-10-2018 IPR003004 GspF/PilC family C4901_05060 e5e60431d43ac0711f7c115686b3fc0c 425 Gene3D G3DSA:1.20.81.30 76 189 1.8E-25 T 14-10-2018 C4901_11380 dddf0bf84ce5ad21002621bddcd81803 114 PRINTS PR01853 Bacterial YajC preprotein translocase signature 63 81 2.1E-13 T 14-10-2018 IPR003849 Preprotein translocase YajC C4901_11380 dddf0bf84ce5ad21002621bddcd81803 114 PRINTS PR01853 Bacterial YajC preprotein translocase signature 25 45 2.1E-13 T 14-10-2018 IPR003849 Preprotein translocase YajC C4901_11380 dddf0bf84ce5ad21002621bddcd81803 114 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 25 105 2.2E-19 T 14-10-2018 IPR003849 Preprotein translocase YajC C4901_11380 dddf0bf84ce5ad21002621bddcd81803 114 Pfam PF02699 Preprotein translocase subunit 27 102 1.8E-22 T 14-10-2018 IPR003849 Preprotein translocase YajC C4901_11380 dddf0bf84ce5ad21002621bddcd81803 114 SMART SM01323 23 105 3.5E-31 T 14-10-2018 IPR003849 Preprotein translocase YajC C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 SUPERFAMILY SSF51735 136 301 9.81E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 SMART SM01002 148 295 2.5E-56 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 SMART SM01003 4 136 3.4E-59 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 Gene3D G3DSA:3.40.50.720 129 303 2.9E-118 T 14-10-2018 C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 346 5.9E-66 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 Gene3D G3DSA:3.40.50.720 3 346 2.9E-118 T 14-10-2018 C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 352 1.2E-124 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 PIRSF PIRSF000183 1 354 6.9E-124 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 3.0E-40 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal C4901_11890 41836153c92e6d09f8d259d8b93fbb19 354 SUPERFAMILY SSF52283 1 351 7.57E-52 T 14-10-2018 C4901_04625 a3f723cf890d2d96bbd89788801628b9 150 Gene3D G3DSA:1.20.120.10 26 150 3.5E-26 T 14-10-2018 C4901_04625 a3f723cf890d2d96bbd89788801628b9 150 SUPERFAMILY SSF47175 30 149 6.18E-23 T 14-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 C4901_04625 a3f723cf890d2d96bbd89788801628b9 150 Pfam PF01322 Cytochrome C' 32 148 2.5E-24 T 14-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 C4901_06855 c24d62bbb7104a770f4c8bab5204fde0 387 Pfam PF02661 Fic/DOC family 108 215 4.2E-17 T 14-10-2018 IPR003812 Fido domain C4901_06855 c24d62bbb7104a770f4c8bab5204fde0 387 SUPERFAMILY SSF140931 86 286 5.49E-30 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_06855 c24d62bbb7104a770f4c8bab5204fde0 387 Gene3D G3DSA:1.10.3290.10 23 295 4.8E-43 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 Gene3D G3DSA:2.40.50.1030 6 85 2.5E-28 T 14-10-2018 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 Pfam PF01016 Ribosomal L27 protein 2 82 3.6E-37 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.1E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.1E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.1E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 27.384 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-11 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 3.1E-38 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 SUPERFAMILY SSF110324 2 82 1.67E-33 T 14-10-2018 C4901_05125 81675dff1e22bc595f8007e0a21b87d6 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 Gene3D G3DSA:2.170.16.10 573 721 1.7E-12 T 14-10-2018 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 Gene3D G3DSA:3.20.70.20 205 572 1.0E-116 T 14-10-2018 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 Gene3D G3DSA:3.20.70.20 876 1208 6.2E-125 T 14-10-2018 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 1042 1064 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 SUPERFAMILY SSF48168 138 348 9.81E-61 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 880 1201 2.4E-109 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 PRINTS PR01183 Ribonucleotide reductase large chain signature 560 571 4.2E-5 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 PRINTS PR01183 Ribonucleotide reductase large chain signature 425 444 4.2E-5 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 SUPERFAMILY SSF51294 567 879 7.46E-22 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 SUPERFAMILY SSF55608 732 810 1.76E-5 T 14-10-2018 IPR027434 Homing endonuclease C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 SMART SM00306 565 658 1.2E-10 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 273 344 6.6E-21 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 Pfam PF02867 Ribonucleotide reductase, barrel domain 350 1198 2.4E-178 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 567 636 2.7E-6 T 14-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 SUPERFAMILY SSF51998 349 1201 8.01E-179 T 14-10-2018 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 Pfam PF03477 ATP cone domain 132 217 6.5E-5 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C4901_16415 b8a2e5e5cec810170c72d4d0e7cd4838 1242 Pfam PF03477 ATP cone domain 21 117 5.8E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 SMART SM00739 123 150 6.6E-4 T 14-10-2018 IPR005824 KOW C4901_14185 9a3cbac740f2b256d476185c347ec029 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.2E-70 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 Gene3D G3DSA:3.30.70.940 1 117 4.4E-46 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 SUPERFAMILY SSF50104 121 176 2.21E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C4901_14185 9a3cbac740f2b256d476185c347ec029 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site C4901_14185 9a3cbac740f2b256d476185c347ec029 177 Pfam PF02357 Transcription termination factor nusG 3 107 4.6E-27 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 SUPERFAMILY SSF82679 3 113 3.01E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 SMART SM00738 2 111 1.2E-48 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 Pfam PF00467 KOW motif 127 160 3.6E-6 T 14-10-2018 IPR005824 KOW C4901_14185 9a3cbac740f2b256d476185c347ec029 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 5.1E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 5.1E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 5.1E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 25.613 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 C4901_14185 9a3cbac740f2b256d476185c347ec029 177 Gene3D G3DSA:2.30.30.30 118 176 3.7E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C4901_08210 c5db88e9265ae2e8478175ed8c096909 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 20 557 1.8E-227 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_08210 c5db88e9265ae2e8478175ed8c096909 558 SUPERFAMILY SSF143975 3 376 1.83E-135 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_08210 c5db88e9265ae2e8478175ed8c096909 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_08210 c5db88e9265ae2e8478175ed8c096909 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_08210 c5db88e9265ae2e8478175ed8c096909 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 557 42.628 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_08210 c5db88e9265ae2e8478175ed8c096909 558 Pfam PF00920 Dehydratase family 36 554 9.5E-219 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_08210 c5db88e9265ae2e8478175ed8c096909 558 Gene3D G3DSA:3.50.30.80 379 528 3.2E-57 T 14-10-2018 C4901_08210 c5db88e9265ae2e8478175ed8c096909 558 SUPERFAMILY SSF52016 380 557 4.08E-59 T 14-10-2018 C4901_10845 ba65fc8d4c6fd70e845573261ba6f7c5 172 SMART SM00271 3 68 0.0088 T 14-10-2018 IPR001623 DnaJ domain C4901_10845 ba65fc8d4c6fd70e845573261ba6f7c5 172 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 15 167 3.8E-21 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_10845 ba65fc8d4c6fd70e845573261ba6f7c5 172 Pfam PF07743 HSCB C-terminal oligomerisation domain 89 165 9.0E-17 T 14-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_10845 ba65fc8d4c6fd70e845573261ba6f7c5 172 Gene3D G3DSA:1.20.1280.20 82 171 5.7E-20 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_10845 ba65fc8d4c6fd70e845573261ba6f7c5 172 SUPERFAMILY SSF46565 3 76 1.05E-13 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C4901_10845 ba65fc8d4c6fd70e845573261ba6f7c5 172 Gene3D G3DSA:1.10.287.110 3 81 2.5E-18 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C4901_10845 ba65fc8d4c6fd70e845573261ba6f7c5 172 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 3 172 19.712 T 14-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_10845 ba65fc8d4c6fd70e845573261ba6f7c5 172 SUPERFAMILY SSF47144 81 167 2.62E-16 T 14-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_16755 f4c3372aa8a5b22cfcde2fc0c5ffd030 610 Pfam PF00723 Glycosyl hydrolases family 15 218 540 5.4E-55 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 C4901_16755 f4c3372aa8a5b22cfcde2fc0c5ffd030 610 SUPERFAMILY SSF48208 191 584 1.58E-106 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 C4901_16755 f4c3372aa8a5b22cfcde2fc0c5ffd030 610 Gene3D G3DSA:1.50.10.10 218 597 4.9E-92 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 C4901_10635 674b264a6746b45507266d518b79498f 632 SMART SM00388 260 326 4.5E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_10635 674b264a6746b45507266d518b79498f 632 Gene3D G3DSA:3.30.565.10 328 500 2.2E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_10635 674b264a6746b45507266d518b79498f 632 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 489 1.3E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_10635 674b264a6746b45507266d518b79498f 632 SUPERFAMILY SSF47384 259 326 1.08E-8 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_10635 674b264a6746b45507266d518b79498f 632 Gene3D G3DSA:1.10.287.130 249 323 7.3E-12 T 14-10-2018 C4901_10635 674b264a6746b45507266d518b79498f 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 450 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_10635 674b264a6746b45507266d518b79498f 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 436 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_10635 674b264a6746b45507266d518b79498f 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 469 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_10635 674b264a6746b45507266d518b79498f 632 PRINTS PR00344 Bacterial sensor protein C-terminal signature 475 488 2.3E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_10635 674b264a6746b45507266d518b79498f 632 Pfam PF00072 Response regulator receiver domain 512 624 9.6E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_10635 674b264a6746b45507266d518b79498f 632 SUPERFAMILY SSF55874 330 488 5.76E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_10635 674b264a6746b45507266d518b79498f 632 Gene3D G3DSA:3.40.50.2300 508 631 8.2E-27 T 14-10-2018 C4901_10635 674b264a6746b45507266d518b79498f 632 Pfam PF00512 His Kinase A (phospho-acceptor) domain 264 321 2.8E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_10635 674b264a6746b45507266d518b79498f 632 Gene3D G3DSA:3.30.450.20 122 248 4.6E-15 T 14-10-2018 C4901_10635 674b264a6746b45507266d518b79498f 632 SUPERFAMILY SSF55785 148 243 2.42E-10 T 14-10-2018 IPR035965 PAS domain superfamily C4901_10635 674b264a6746b45507266d518b79498f 632 SUPERFAMILY SSF52172 510 628 1.42E-28 T 14-10-2018 IPR011006 CheY-like superfamily C4901_10635 674b264a6746b45507266d518b79498f 632 SMART SM00387 367 491 1.1E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_10635 674b264a6746b45507266d518b79498f 632 SMART SM00448 510 623 4.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 Gene3D G3DSA:3.30.479.20 156 272 2.9E-39 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 SUPERFAMILY SSF46934 1 55 3.4E-17 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 Gene3D G3DSA:1.10.286.20 192 238 2.9E-39 T 14-10-2018 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 SUPERFAMILY SSF54713 151 292 1.7E-47 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 SUPERFAMILY SSF54713 55 146 4.09E-22 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 291 1.0E-92 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 76 86 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 Gene3D G3DSA:1.10.8.10 1 55 6.8E-23 T 14-10-2018 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 290 74.618 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 Gene3D G3DSA:3.30.479.20 56 149 4.8E-25 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 C4901_10430 c524866d5a72ca38e5056543f0e15e92 293 Pfam PF00889 Elongation factor TS 72 273 1.8E-63 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 C4901_16665 fc027cb294d3b11cf1dcd4bf993bee1c 80 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 51 4.3E-11 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_16665 fc027cb294d3b11cf1dcd4bf993bee1c 80 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 42 1.0E-8 T 14-10-2018 C4901_16665 fc027cb294d3b11cf1dcd4bf993bee1c 80 SUPERFAMILY SSF143120 1 42 5.75E-10 T 14-10-2018 IPR036165 YefM-like superfamily C4901_16665 fc027cb294d3b11cf1dcd4bf993bee1c 80 Gene3D G3DSA:3.40.1620.10 1 38 6.0E-10 T 14-10-2018 C4901_06045 52639639e01823f2011c91bd8faab878 1113 SUPERFAMILY SSF51445 16 470 1.82E-127 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_06045 52639639e01823f2011c91bd8faab878 1113 SUPERFAMILY SSF51011 477 553 1.08E-17 T 14-10-2018 C4901_06045 52639639e01823f2011c91bd8faab878 1113 Gene3D G3DSA:3.90.1200.10 824 1110 2.5E-58 T 14-10-2018 C4901_06045 52639639e01823f2011c91bd8faab878 1113 TIGRFAM TIGR02457 TreS_Cterm: putative maltokinase 588 1099 1.4E-133 T 14-10-2018 IPR012811 Trehalose synthase/probable maltokinase, C-terminal domain C4901_06045 52639639e01823f2011c91bd8faab878 1113 Gene3D G3DSA:2.60.40.1180 473 562 1.8E-33 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta C4901_06045 52639639e01823f2011c91bd8faab878 1113 SMART SM00642 26 425 2.3E-97 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06045 52639639e01823f2011c91bd8faab878 1113 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 18 553 4.7E-282 T 14-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 C4901_06045 52639639e01823f2011c91bd8faab878 1113 Gene3D G3DSA:3.90.400.10 116 186 9.0E-215 T 14-10-2018 C4901_06045 52639639e01823f2011c91bd8faab878 1113 Pfam PF00128 Alpha amylase, catalytic domain 41 394 2.3E-72 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06045 52639639e01823f2011c91bd8faab878 1113 Pfam PF16657 Maltogenic Amylase, C-terminal domain 473 550 8.0E-30 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal C4901_06045 52639639e01823f2011c91bd8faab878 1113 Gene3D G3DSA:3.20.20.80 18 467 9.0E-215 T 14-10-2018 C4901_06045 52639639e01823f2011c91bd8faab878 1113 SUPERFAMILY SSF56112 762 1074 1.9E-11 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_12910 7b4103bf5e8fefb736a91375c9ea5244 423 SUPERFAMILY SSF56935 28 423 1.34E-35 T 14-10-2018 C4901_12910 7b4103bf5e8fefb736a91375c9ea5244 423 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 251 385 3.0E-9 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C4901_12910 7b4103bf5e8fefb736a91375c9ea5244 423 Gene3D G3DSA:2.40.160.60 29 423 4.9E-65 T 14-10-2018 C4901_13560 29c52b92516b11ffc2ec7096f25bf7bd 310 SUPERFAMILY SSF53098 138 298 3.92E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_13560 29c52b92516b11ffc2ec7096f25bf7bd 310 Pfam PF00665 Integrase core domain 137 253 5.4E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_13560 29c52b92516b11ffc2ec7096f25bf7bd 310 Pfam PF13565 Homeodomain-like domain 36 110 1.7E-11 T 14-10-2018 C4901_13560 29c52b92516b11ffc2ec7096f25bf7bd 310 Gene3D G3DSA:3.30.420.10 156 297 3.2E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_13560 29c52b92516b11ffc2ec7096f25bf7bd 310 SUPERFAMILY SSF46689 14 112 3.94E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_02545 f89b24e9d6a6782fb602c295b0ae0ba1 477 Gene3D G3DSA:3.40.50.11290 215 313 4.6E-44 T 14-10-2018 C4901_02545 f89b24e9d6a6782fb602c295b0ae0ba1 477 SUPERFAMILY SSF56059 22 468 2.05E-57 T 14-10-2018 C4901_02545 f89b24e9d6a6782fb602c295b0ae0ba1 477 Pfam PF14403 Circularly permuted ATP-grasp type 2 78 453 5.4E-165 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 C4901_02545 f89b24e9d6a6782fb602c295b0ae0ba1 477 Gene3D G3DSA:3.30.1490.270 350 410 4.7E-25 T 14-10-2018 C4901_02545 f89b24e9d6a6782fb602c295b0ae0ba1 477 PIRSF PIRSF005522 1 477 1.8E-221 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 Gene3D G3DSA:2.40.50.140 575 684 2.1E-30 T 14-10-2018 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 7 529 1.5E-157 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 Hamap MF_00098 Methionine--tRNA ligase [metG]. 5 547 37.28 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 Pfam PF01588 Putative tRNA binding domain 590 681 1.9E-21 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 SUPERFAMILY SSF57770 141 175 1.2E-11 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 Gene3D G3DSA:1.10.730.10 381 538 5.5E-29 T 14-10-2018 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 Pfam PF09334 tRNA synthetases class I (M) 7 397 4.6E-145 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 SUPERFAMILY SSF52374 5 385 2.82E-93 T 14-10-2018 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 9 22 3.4E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 89 100 3.4E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 41 55 3.4E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 3.4E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 3.4E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 250 261 3.4E-24 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 Gene3D G3DSA:3.40.50.620 7 380 6.4E-140 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 562 685 2.5E-35 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 Gene3D G3DSA:2.20.28.20 141 175 6.4E-140 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 14 25 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 SUPERFAMILY SSF50249 583 684 1.84E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_03950 f96d5a2fe40a1540ffc622dd79f1607d 685 SUPERFAMILY SSF47323 390 542 4.11E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_11950 bfd2f3db71c9648155bcc9238fd726ac 122 SUPERFAMILY SSF75169 6 122 1.45E-12 T 14-10-2018 IPR027396 DsrEFH-like C4901_11950 bfd2f3db71c9648155bcc9238fd726ac 122 Pfam PF02635 DsrE/DsrF-like family 5 94 4.9E-7 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_11950 bfd2f3db71c9648155bcc9238fd726ac 122 Gene3D G3DSA:3.40.1260.10 1 120 3.2E-27 T 14-10-2018 IPR027396 DsrEFH-like C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 142 166 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 216 234 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 401 419 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 138 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 342 357 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 245 264 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 296 317 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 478 499 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 366 387 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 184 196 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 57 82 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 429 448 7.4E-78 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 66 517 2.4E-123 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 Gene3D G3DSA:1.20.210.10 53 578 1.3E-165 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 SUPERFAMILY SSF81442 55 576 3.66E-150 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06125 5ddc238911b598dba657164d90e59f71 692 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 298 352 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_01055 25e05553c4f4a9551131ed06b27cc71e 141 SUPERFAMILY SSF46626 23 133 3.53E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_01055 25e05553c4f4a9551131ed06b27cc71e 141 Gene3D G3DSA:1.10.760.10 7 138 2.0E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_04740 9f9db59ef19cb83195630c1a7a5779d8 440 SUPERFAMILY SSF51556 59 358 8.17E-97 T 14-10-2018 IPR032466 Metal-dependent hydrolase C4901_04740 9f9db59ef19cb83195630c1a7a5779d8 440 Pfam PF01979 Amidohydrolase family 56 404 1.1E-69 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C4901_04740 9f9db59ef19cb83195630c1a7a5779d8 440 Gene3D G3DSA:2.30.40.10 12 424 1.9E-168 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_04740 9f9db59ef19cb83195630c1a7a5779d8 440 SUPERFAMILY SSF51338 4 431 5.99E-29 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_04740 9f9db59ef19cb83195630c1a7a5779d8 440 Gene3D G3DSA:3.20.20.140 60 350 1.9E-168 T 14-10-2018 C4901_04740 9f9db59ef19cb83195630c1a7a5779d8 440 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 4 432 41.769 T 14-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 C4901_00710 353b03777b47205444e97d9eb105b075 126 Pfam PF04379 ApaG domain 19 103 8.9E-37 T 14-10-2018 IPR007474 ApaG domain C4901_00710 353b03777b47205444e97d9eb105b075 126 SUPERFAMILY SSF110069 6 126 2.09E-50 T 14-10-2018 IPR036767 ApaG domain superfamily C4901_00710 353b03777b47205444e97d9eb105b075 126 Gene3D G3DSA:2.60.40.1470 1 126 3.8E-50 T 14-10-2018 IPR036767 ApaG domain superfamily C4901_00710 353b03777b47205444e97d9eb105b075 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 34.75 T 14-10-2018 IPR023065 Uncharacterised protein family ApaG C4901_16540 fc027d25318af387795d144e8e7cc0c2 172 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 3 164 2.8E-84 T 14-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 C4901_16540 fc027d25318af387795d144e8e7cc0c2 172 SMART SM00852 10 154 5.2E-30 T 14-10-2018 IPR001453 MoaB/Mog domain C4901_16540 fc027d25318af387795d144e8e7cc0c2 172 Pfam PF00994 Probable molybdopterin binding domain 10 152 7.1E-33 T 14-10-2018 IPR001453 MoaB/Mog domain C4901_16540 fc027d25318af387795d144e8e7cc0c2 172 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 7 149 8.0E-34 T 14-10-2018 IPR001453 MoaB/Mog domain C4901_16540 fc027d25318af387795d144e8e7cc0c2 172 Gene3D G3DSA:3.40.980.10 1 167 2.3E-50 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C4901_16540 fc027d25318af387795d144e8e7cc0c2 172 SUPERFAMILY SSF53218 4 166 1.7E-46 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C4901_16540 fc027d25318af387795d144e8e7cc0c2 172 PIRSF PIRSF006443 1 162 1.5E-62 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 SUPERFAMILY SSF53850 93 301 1.74E-42 T 14-10-2018 C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 SUPERFAMILY SSF46785 2 85 5.34E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.8E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 Gene3D G3DSA:1.10.10.10 5 93 4.6E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 Gene3D G3DSA:3.40.190.290 95 301 3.3E-37 T 14-10-2018 C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 Pfam PF03466 LysR substrate binding domain 92 294 1.7E-48 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_14980 8adba91d1d7c5ed955acf01ed6df4624 328 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.2E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 SUPERFAMILY SSF48179 473 573 7.74E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 SUPERFAMILY SSF52096 4 287 2.49E-53 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 SUPERFAMILY SSF51735 296 473 2.8E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 Gene3D G3DSA:1.10.1040.50 476 663 6.2E-58 T 14-10-2018 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 471 495 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 199 6.9E-29 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 SUPERFAMILY SSF48179 579 659 2.3E-16 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 299 470 2.6E-44 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 Gene3D G3DSA:3.90.226.10 4 294 4.1E-69 T 14-10-2018 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 474 565 1.5E-25 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 C4901_16795 4548708db4d646d296ad28c5bb4b42b6 672 Gene3D G3DSA:3.40.50.720 295 475 3.1E-50 T 14-10-2018 C4901_04450 0655c82f09953e014ca0a01989876cbb 152 Gene3D G3DSA:1.10.10.10 1 83 1.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_04450 0655c82f09953e014ca0a01989876cbb 152 Gene3D G3DSA:3.30.1490.190 85 144 1.8E-20 T 14-10-2018 C4901_04450 0655c82f09953e014ca0a01989876cbb 152 Pfam PF01475 Ferric uptake regulator family 9 129 7.0E-43 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 C4901_04450 0655c82f09953e014ca0a01989876cbb 152 SUPERFAMILY SSF46785 7 132 2.18E-41 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_10790 b21750ed2552536992bbeff19d323cac 390 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 2 362 1.9E-106 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB C4901_10790 b21750ed2552536992bbeff19d323cac 390 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 1 385 31.177 T 14-10-2018 IPR017687 Outer membrane protein assembly factor BamB C4901_10790 b21750ed2552536992bbeff19d323cac 390 SMART SM00564 102 133 0.24 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10790 b21750ed2552536992bbeff19d323cac 390 SMART SM00564 62 93 0.0041 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10790 b21750ed2552536992bbeff19d323cac 390 SMART SM00564 316 347 37.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10790 b21750ed2552536992bbeff19d323cac 390 SMART SM00564 142 173 15.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10790 b21750ed2552536992bbeff19d323cac 390 SMART SM00564 186 218 130.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10790 b21750ed2552536992bbeff19d323cac 390 SMART SM00564 275 306 480.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10790 b21750ed2552536992bbeff19d323cac 390 SUPERFAMILY SSF50998 23 378 1.4E-61 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C4901_10790 b21750ed2552536992bbeff19d323cac 390 Pfam PF13360 PQQ-like domain 75 305 8.8E-43 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_10790 b21750ed2552536992bbeff19d323cac 390 Gene3D G3DSA:2.130.10.10 19 388 5.9E-86 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 SUPERFAMILY SSF56672 4 249 5.52E-72 T 14-10-2018 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 Gene3D G3DSA:2.30.40.20 25 90 4.6E-47 T 14-10-2018 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 Hamap MF_01113 DNA polymerase IV [dinB]. 5 374 32.578 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 Gene3D G3DSA:3.30.70.270 8 177 4.6E-47 T 14-10-2018 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 Gene3D G3DSA:1.10.150.20 183 251 1.1E-17 T 14-10-2018 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 SUPERFAMILY SSF100879 256 359 1.41E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 Gene3D G3DSA:3.30.1490.100 255 361 2.9E-24 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 Pfam PF11799 impB/mucB/samB family C-terminal domain 251 363 8.0E-21 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C4901_16720 69f2155c61dbb081a7a898c782db583e 389 Pfam PF00817 impB/mucB/samB family 11 168 8.2E-41 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 C4901_08025 c6be66abd61a9f187a162621cb8ec41d 233 PRINTS PR01805 VacJ lipoprotein signature 32 45 4.8E-23 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_08025 c6be66abd61a9f187a162621cb8ec41d 233 PRINTS PR01805 VacJ lipoprotein signature 49 65 4.8E-23 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_08025 c6be66abd61a9f187a162621cb8ec41d 233 PRINTS PR01805 VacJ lipoprotein signature 100 117 4.8E-23 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_08025 c6be66abd61a9f187a162621cb8ec41d 233 PRINTS PR01805 VacJ lipoprotein signature 136 153 4.8E-23 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_08025 c6be66abd61a9f187a162621cb8ec41d 233 Pfam PF04333 MlaA lipoprotein 31 224 1.2E-63 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_06390 7dbdd96566ed8149bc17bd42c0613113 188 Pfam PF13470 PIN domain 48 161 3.1E-7 T 14-10-2018 IPR002716 PIN domain C4901_14680 04149ae5cff4d429be09739253bfb2c2 639 PIRSF PIRSF000171 7 637 2.5E-253 T 14-10-2018 C4901_14680 04149ae5cff4d429be09739253bfb2c2 639 Gene3D G3DSA:3.90.700.10 278 408 6.0E-281 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_14680 04149ae5cff4d429be09739253bfb2c2 639 SUPERFAMILY SSF51905 10 486 1.85E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_14680 04149ae5cff4d429be09739253bfb2c2 639 SUPERFAMILY SSF46977 500 632 5.76E-39 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_14680 04149ae5cff4d429be09739253bfb2c2 639 SUPERFAMILY SSF56425 253 398 5.13E-67 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_14680 04149ae5cff4d429be09739253bfb2c2 639 Pfam PF00890 FAD binding domain 18 393 1.1E-9 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_14680 04149ae5cff4d429be09739253bfb2c2 639 Gene3D G3DSA:3.50.50.90 16 630 6.0E-281 T 14-10-2018 C4901_14680 04149ae5cff4d429be09739253bfb2c2 639 TIGRFAM TIGR02061 aprA: adenylylsulfate reductase, alpha subunit 18 633 2.2E-283 T 14-10-2018 IPR011803 Adenylylsulphate reductase, alpha subunit KEGG: 00920+1.8.99.2|MetaCyc: PWY-5278|MetaCyc: PWY-5279 C4901_00295 193da61d23db119864a67080650e6937 379 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 113 309 1.2E-24 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_00295 193da61d23db119864a67080650e6937 379 Gene3D G3DSA:3.40.50.2000 190 322 7.1E-29 T 14-10-2018 C4901_00295 193da61d23db119864a67080650e6937 379 Gene3D G3DSA:3.40.50.2000 37 159 2.6E-12 T 14-10-2018 C4901_00295 193da61d23db119864a67080650e6937 379 SUPERFAMILY SSF53756 40 376 9.42E-50 T 14-10-2018 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 SMART SM00358 154 221 4.4E-17 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 Gene3D G3DSA:1.10.1520.10 5 142 4.7E-42 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 ProSitePatterns PS00517 Ribonuclease III family signature. 36 44 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 Pfam PF14622 Ribonuclease-III-like 18 135 1.2E-32 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 SUPERFAMILY SSF69065 6 156 4.71E-47 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 Gene3D G3DSA:3.30.160.20 152 221 1.2E-17 T 14-10-2018 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 SUPERFAMILY SSF54768 107 221 5.46E-23 T 14-10-2018 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 Pfam PF00035 Double-stranded RNA binding motif 154 220 2.6E-10 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 Hamap MF_00104 Ribonuclease 3 [rnc]. 7 217 29.847 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 SMART SM00535 19 147 6.4E-47 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 C4901_07100 3c97344ba3536dee5ede37fda6d02b58 223 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 220 1.3E-70 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 C4901_03665 c2d0edcdaa40be4c0c6e86453fcffa87 94 Gene3D G3DSA:3.30.70.270 2 94 8.7E-34 T 14-10-2018 C4901_03665 c2d0edcdaa40be4c0c6e86453fcffa87 94 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 10 94 9.0E-29 T 14-10-2018 IPR000160 GGDEF domain C4901_03665 c2d0edcdaa40be4c0c6e86453fcffa87 94 SUPERFAMILY SSF55073 17 94 4.55E-28 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_03665 c2d0edcdaa40be4c0c6e86453fcffa87 94 SMART SM00267 3 94 1.4E-5 T 14-10-2018 IPR000160 GGDEF domain C4901_03665 c2d0edcdaa40be4c0c6e86453fcffa87 94 Pfam PF00990 Diguanylate cyclase, GGDEF domain 11 94 1.9E-31 T 14-10-2018 IPR000160 GGDEF domain C4901_11740 5492a074e448095094026cfcfd412395 423 Pfam PF12626 Polymerase A arginine-rich C-terminus 302 419 9.9E-40 T 14-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain C4901_11740 5492a074e448095094026cfcfd412395 423 SUPERFAMILY SSF81301 16 155 1.96E-40 T 14-10-2018 C4901_11740 5492a074e448095094026cfcfd412395 423 Pfam PF01743 Poly A polymerase head domain 41 160 9.1E-37 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C4901_11740 5492a074e448095094026cfcfd412395 423 Gene3D G3DSA:1.10.3090.10 159 404 5.5E-80 T 14-10-2018 C4901_11740 5492a074e448095094026cfcfd412395 423 SUPERFAMILY SSF81891 158 390 1.83E-43 T 14-10-2018 C4901_11740 5492a074e448095094026cfcfd412395 423 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 190 248 3.6E-14 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 C4901_11740 5492a074e448095094026cfcfd412395 423 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 419 1.9E-145 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 C4901_11740 5492a074e448095094026cfcfd412395 423 Gene3D G3DSA:3.30.460.10 9 156 3.5E-53 T 14-10-2018 C4901_11740 5492a074e448095094026cfcfd412395 423 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 5 421 34.236 T 14-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 C4901_07985 d7f069d2d2a9154c495ab5488f10fd14 280 SUPERFAMILY SSF89550 2 271 3.92E-46 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C4901_07985 d7f069d2d2a9154c495ab5488f10fd14 280 SMART SM00481 3 68 1.4E-18 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal C4901_07985 d7f069d2d2a9154c495ab5488f10fd14 280 Gene3D G3DSA:1.10.150.650 96 164 8.5E-73 T 14-10-2018 C4901_07985 d7f069d2d2a9154c495ab5488f10fd14 280 Pfam PF02811 PHP domain 4 68 4.6E-7 T 14-10-2018 IPR004013 PHP domain GO:0003824 C4901_07985 d7f069d2d2a9154c495ab5488f10fd14 280 Gene3D G3DSA:3.20.20.140 4 245 8.5E-73 T 14-10-2018 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 ProSitePatterns PS00449 ATP synthase a subunit signature. 189 198 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 Pfam PF00119 ATP synthase A chain 31 246 8.3E-52 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 Gene3D G3DSA:1.20.120.220 81 253 1.6E-54 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 253 14.191 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 SUPERFAMILY SSF81336 86 246 7.59E-42 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 PRINTS PR00123 ATP synthase A subunit signature 233 248 2.0E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 PRINTS PR00123 ATP synthase A subunit signature 88 104 2.0E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 PRINTS PR00123 ATP synthase A subunit signature 186 208 2.0E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17025 12677fcff9c28a9a8eeb742cd9d3bd1f 257 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 29 247 4.9E-38 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_02000 1d2f4ac871700e37f4defd6d13ba1376 155 SUPERFAMILY SSF81301 59 151 2.12E-14 T 14-10-2018 C4901_02000 1d2f4ac871700e37f4defd6d13ba1376 155 Gene3D G3DSA:3.30.460.10 44 147 1.8E-14 T 14-10-2018 C4901_02000 1d2f4ac871700e37f4defd6d13ba1376 155 Pfam PF01909 Nucleotidyltransferase domain 68 101 1.1E-8 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 C4901_03585 2de735eee282819f590177f1290a4f8d 199 Gene3D G3DSA:3.40.50.300 1 198 1.9E-52 T 14-10-2018 C4901_03585 2de735eee282819f590177f1290a4f8d 199 Pfam PF01121 Dephospho-CoA kinase 6 179 1.4E-43 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C4901_03585 2de735eee282819f590177f1290a4f8d 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 6 183 3.1E-38 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C4901_03585 2de735eee282819f590177f1290a4f8d 199 SUPERFAMILY SSF52540 1 190 1.78E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03585 2de735eee282819f590177f1290a4f8d 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 3 196 22.843 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 C4901_10420 ec476e828c303a2077f50751b1b883f0 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 1.3E-65 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 C4901_10420 ec476e828c303a2077f50751b1b883f0 185 Gene3D G3DSA:1.10.132.20 12 182 3.5E-63 T 14-10-2018 C4901_10420 ec476e828c303a2077f50751b1b883f0 185 Pfam PF01765 Ribosome recycling factor 20 183 2.2E-58 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 C4901_10420 ec476e828c303a2077f50751b1b883f0 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 25.858 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 C4901_10420 ec476e828c303a2077f50751b1b883f0 185 Gene3D G3DSA:3.30.1360.40 31 105 3.5E-63 T 14-10-2018 C4901_10420 ec476e828c303a2077f50751b1b883f0 185 SUPERFAMILY SSF55194 4 184 2.49E-65 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 C4901_14950 31326db8b38f2c2a2a5c507100849f19 457 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 47 454 9.3E-171 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 C4901_14950 31326db8b38f2c2a2a5c507100849f19 457 Pfam PF00202 Aminotransferase class-III 60 453 1.4E-120 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_14950 31326db8b38f2c2a2a5c507100849f19 457 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 35 457 48.768 T 14-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 C4901_14950 31326db8b38f2c2a2a5c507100849f19 457 Gene3D G3DSA:3.40.640.10 93 363 4.1E-162 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_14950 31326db8b38f2c2a2a5c507100849f19 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 275 312 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_14950 31326db8b38f2c2a2a5c507100849f19 457 SUPERFAMILY SSF53383 40 456 7.6E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_14950 31326db8b38f2c2a2a5c507100849f19 457 Gene3D G3DSA:3.90.1150.10 45 447 4.1E-162 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_04080 a5024032e9a10d0e15fd505faee52108 196 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 8 191 27.456 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 C4901_04080 a5024032e9a10d0e15fd505faee52108 196 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 8 189 7.6E-56 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 C4901_04080 a5024032e9a10d0e15fd505faee52108 196 Gene3D G3DSA:3.40.50.170 7 196 1.2E-60 T 14-10-2018 C4901_04080 a5024032e9a10d0e15fd505faee52108 196 SUPERFAMILY SSF53328 7 193 1.83E-52 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_04080 a5024032e9a10d0e15fd505faee52108 196 Pfam PF00551 Formyl transferase 8 185 7.4E-47 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_05430 64d5e394bb5a0526ee86ae8359d2a879 333 Gene3D G3DSA:3.40.50.300 2 303 7.9E-68 T 14-10-2018 C4901_05430 64d5e394bb5a0526ee86ae8359d2a879 333 SUPERFAMILY SSF52540 4 295 1.02E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05430 64d5e394bb5a0526ee86ae8359d2a879 333 Pfam PF00685 Sulfotransferase domain 8 226 4.5E-13 T 14-10-2018 IPR000863 Sulfotransferase domain GO:0008146 C4901_09975 06e900376b4f34451e958726879822a0 212 Pfam PF13618 Gluconate 2-dehydrogenase subunit 3 47 178 1.5E-21 T 14-10-2018 IPR027056 Gluconate 2-dehydrogenase subunit 3 KEGG: 00030+1.1.99.3|MetaCyc: PWY-7165 C4901_05235 a59838e43488afb5481a4a7cc3dc31e8 541 Gene3D G3DSA:3.40.50.300 206 365 1.1E-14 T 14-10-2018 C4901_05235 a59838e43488afb5481a4a7cc3dc31e8 541 Pfam PF13538 UvrD-like helicase C-terminal domain 480 523 2.9E-10 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain C4901_05235 a59838e43488afb5481a4a7cc3dc31e8 541 Gene3D G3DSA:3.40.50.300 369 538 1.1E-7 T 14-10-2018 C4901_05235 a59838e43488afb5481a4a7cc3dc31e8 541 Pfam PF13245 AAA domain 213 350 5.9E-10 T 14-10-2018 C4901_05235 a59838e43488afb5481a4a7cc3dc31e8 541 Pfam PF08378 Nuclease-related domain 17 126 2.7E-7 T 14-10-2018 IPR011528 Nuclease-related domain, NERD C4901_05235 a59838e43488afb5481a4a7cc3dc31e8 541 SUPERFAMILY SSF52540 212 530 1.18E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02580 3f29c11d9a1261a2a69d31d6048c134a 262 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 70 81 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_02580 3f29c11d9a1261a2a69d31d6048c134a 262 SUPERFAMILY SSF54862 32 140 2.98E-13 T 14-10-2018 C4901_02580 3f29c11d9a1261a2a69d31d6048c134a 262 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 136 245 1.1E-22 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02580 3f29c11d9a1261a2a69d31d6048c134a 262 SUPERFAMILY SSF56770 122 251 4.97E-46 T 14-10-2018 C4901_02580 3f29c11d9a1261a2a69d31d6048c134a 262 Pfam PF00037 4Fe-4S binding domain 64 85 1.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_02580 3f29c11d9a1261a2a69d31d6048c134a 262 Gene3D G3DSA:3.40.50.12280 116 260 1.2E-44 T 14-10-2018 C4901_02580 3f29c11d9a1261a2a69d31d6048c134a 262 Gene3D G3DSA:3.30.70.20 36 97 5.8E-10 T 14-10-2018 C4901_16620 78f57ee3be9ae64dd1c7b1e46e9c5705 233 Pfam PF09694 Bacterial protein of unknown function (Gcw_chp) 46 198 8.3E-10 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 C4901_16620 78f57ee3be9ae64dd1c7b1e46e9c5705 233 TIGRFAM TIGR02001 gcw_chp: conserved hypothetical protein 28 211 3.3E-21 T 14-10-2018 IPR010239 Conserved hypothetical protein CHP02001 C4901_08675 a1387ed9fc57b6f41bad4b5c03db5adb 393 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 14 325 4.4E-90 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 C4901_08675 a1387ed9fc57b6f41bad4b5c03db5adb 393 Pfam PF13393 Histidyl-tRNA synthetase 11 320 5.5E-112 T 14-10-2018 C4901_08675 a1387ed9fc57b6f41bad4b5c03db5adb 393 SUPERFAMILY SSF55681 8 326 7.14E-57 T 14-10-2018 C4901_08675 a1387ed9fc57b6f41bad4b5c03db5adb 393 Gene3D G3DSA:3.30.930.10 3 333 5.6E-77 T 14-10-2018 C4901_08675 a1387ed9fc57b6f41bad4b5c03db5adb 393 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 18 371 30.824 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 C4901_08675 a1387ed9fc57b6f41bad4b5c03db5adb 393 PIRSF PIRSF001549 6 376 4.9E-52 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 526 4.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 562 4.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 581 4.6E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 239 359 5.4E-8 T 14-10-2018 IPR000014 PAS domain C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 Pfam PF00989 PAS fold 238 351 1.4E-9 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 Gene3D G3DSA:3.30.450.20 227 355 1.2E-13 T 14-10-2018 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 SMART SM00387 474 584 3.7E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 Gene3D G3DSA:3.30.565.10 430 586 1.1E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 SMART SM00091 236 303 1.1E-4 T 14-10-2018 IPR000014 PAS domain C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 582 2.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 SUPERFAMILY SSF47384 346 427 1.37E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 SUPERFAMILY SSF55785 230 352 7.5E-10 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 Pfam PF00512 His Kinase A (phospho-acceptor) domain 361 428 5.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 SMART SM00388 360 429 6.9E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 SUPERFAMILY SSF55874 418 582 3.14E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_13085 91ab46aefbbc19c91f6f24738a6c82ab 601 Gene3D G3DSA:1.10.287.130 356 427 3.4E-16 T 14-10-2018 C4901_05470 230c7f198d00f06bad16c34307f23156 201 SUPERFAMILY SSF159594 36 200 9.94E-19 T 14-10-2018 C4901_05470 230c7f198d00f06bad16c34307f23156 201 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 41 196 2.5E-19 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component C4901_13380 9a9c5ea8209e4a39b6e10f8ff5407b30 851 Gene3D G3DSA:2.170.130.10 174 295 8.6E-11 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C4901_13380 9a9c5ea8209e4a39b6e10f8ff5407b30 851 Pfam PF07715 TonB-dependent Receptor Plug Domain 169 270 2.9E-10 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C4901_13380 9a9c5ea8209e4a39b6e10f8ff5407b30 851 Pfam PF00593 TonB dependent receptor 370 848 5.8E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C4901_13380 9a9c5ea8209e4a39b6e10f8ff5407b30 851 SUPERFAMILY SSF56935 169 851 5.13E-66 T 14-10-2018 C4901_13380 9a9c5ea8209e4a39b6e10f8ff5407b30 851 Gene3D G3DSA:2.40.170.20 296 851 6.9E-49 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C4901_15675 52c9de0fa18e1fb73289fe238a4d9f3a 453 Gene3D G3DSA:1.20.1250.20 269 453 3.3E-8 T 14-10-2018 C4901_15675 52c9de0fa18e1fb73289fe238a4d9f3a 453 SUPERFAMILY SSF103473 23 452 4.45E-52 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_15675 52c9de0fa18e1fb73289fe238a4d9f3a 453 Gene3D G3DSA:1.20.1720.10 26 268 4.5E-42 T 14-10-2018 C4901_15675 52c9de0fa18e1fb73289fe238a4d9f3a 453 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C4901_15675 52c9de0fa18e1fb73289fe238a4d9f3a 453 Pfam PF07690 Major Facilitator Superfamily 30 414 4.8E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_11155 1713daab7b86fce7271338c5da60359d 112 Gene3D G3DSA:2.60.120.10 7 111 1.1E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_11155 1713daab7b86fce7271338c5da60359d 112 SUPERFAMILY SSF51182 6 100 2.7E-14 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 Gene3D G3DSA:2.40.50.140 1 64 2.6E-23 T 14-10-2018 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 Pfam PF07499 RuvA, C-terminal domain 141 187 2.1E-12 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 188 30.417 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 SMART SM00278 107 126 0.0045 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 SMART SM00278 72 91 1.9 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 Gene3D G3DSA:1.10.8.10 137 187 1.3E-10 T 14-10-2018 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 SUPERFAMILY SSF47781 65 132 5.4E-20 T 14-10-2018 IPR010994 RuvA domain 2-like C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 186 4.6E-51 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 Pfam PF01330 RuvA N terminal domain 1 61 4.3E-18 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 Pfam PF14520 Helix-hairpin-helix domain 71 127 2.1E-15 T 14-10-2018 C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 SUPERFAMILY SSF46929 141 187 4.19E-8 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 SUPERFAMILY SSF50249 1 62 1.66E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_13815 508fee7a5874f17bffcc5c1565885cce 189 Gene3D G3DSA:1.10.150.20 66 135 1.1E-22 T 14-10-2018 C4901_08980 8a78562f77abadf53e41bc259777f34c 436 Gene3D G3DSA:3.40.50.2000 7 405 1.8E-123 T 14-10-2018 C4901_08980 8a78562f77abadf53e41bc259777f34c 436 Pfam PF13439 Glycosyltransferase Family 4 24 201 4.6E-29 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C4901_08980 8a78562f77abadf53e41bc259777f34c 436 Gene3D G3DSA:3.40.50.2000 198 388 1.8E-123 T 14-10-2018 C4901_08980 8a78562f77abadf53e41bc259777f34c 436 Pfam PF00534 Glycosyl transferases group 1 207 384 2.0E-42 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_08980 8a78562f77abadf53e41bc259777f34c 436 SUPERFAMILY SSF53756 22 410 8.64E-90 T 14-10-2018 C4901_04135 1cdca96ba995db0d5ca4e107339299e6 127 SUPERFAMILY SSF117916 58 123 1.2E-16 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C4901_04135 1cdca96ba995db0d5ca4e107339299e6 127 Gene3D G3DSA:3.30.300.130 54 127 1.7E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C4901_04135 1cdca96ba995db0d5ca4e107339299e6 127 Pfam PF01106 NifU-like domain 60 123 1.1E-18 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 C4901_04135 1cdca96ba995db0d5ca4e107339299e6 127 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 67 123 1.0E-8 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 C4901_08710 64e2be8a2de06062e99057562200b866 149 SUPERFAMILY SSF55653 59 148 4.05E-26 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily C4901_08710 64e2be8a2de06062e99057562200b866 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 148 4.2E-47 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_08710 64e2be8a2de06062e99057562200b866 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.823 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_08710 64e2be8a2de06062e99057562200b866 149 Gene3D G3DSA:3.40.5.10 1 50 1.9E-21 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08710 64e2be8a2de06062e99057562200b866 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.0E-21 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08710 64e2be8a2de06062e99057562200b866 149 SUPERFAMILY SSF55658 1 57 1.27E-17 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal C4901_08710 64e2be8a2de06062e99057562200b866 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08710 64e2be8a2de06062e99057562200b866 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 147 1.2E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal C4901_08710 64e2be8a2de06062e99057562200b866 149 Gene3D G3DSA:3.10.430.100 61 148 2.4E-28 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 SUPERFAMILY SSF55124 343 419 2.62E-18 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 348 414 7.2E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 74 134 1.3E-14 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 PRINTS PR00397 Sirohaem Fe-binding site signature 476 494 3.6E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 PRINTS PR00397 Sirohaem Fe-binding site signature 428 446 3.6E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 438 511 0.51 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 SUPERFAMILY SSF56014 426 557 1.83E-31 T 14-10-2018 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 SUPERFAMILY SSF55124 11 143 1.24E-28 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 476 492 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 172 324 1.2E-41 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 SUPERFAMILY SSF56014 144 341 2.88E-51 T 14-10-2018 C4901_15510 cc86a83bf2a4782bfb473bf5d17a24c6 563 Gene3D G3DSA:3.30.413.10 424 561 2.1E-33 T 14-10-2018 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 SUPERFAMILY SSF55811 212 334 5.37E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 ProSitePatterns PS01155 Endonuclease III family signature. 99 128 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 Pfam PF14815 NUDIX domain 223 331 4.2E-16 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 SUPERFAMILY SSF48150 3 208 1.88E-62 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 33 153 1.9E-15 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 SMART SM00478 36 185 6.2E-41 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 Gene3D G3DSA:1.10.1670.10 7 203 1.5E-74 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 Pfam PF00633 Helix-hairpin-helix motif 97 125 1.3E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 Gene3D G3DSA:3.90.79.10 220 335 2.9E-10 T 14-10-2018 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 Gene3D G3DSA:1.10.340.30 19 129 1.5E-74 T 14-10-2018 C4901_00110 c967da9ce9dbc65e189dfa6270570d9a 337 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 262 1.1E-87 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 Gene3D G3DSA:3.10.50.40 150 246 1.5E-81 T 14-10-2018 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 PIRSF PIRSF003095 1 430 5.7E-107 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 229 1.3E-7 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 414 9.1E-28 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 SUPERFAMILY SSF102735 1 128 4.19E-32 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 1.5E-32 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 Hamap MF_00303 Trigger factor [tig]. 1 420 19.203 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 Gene3D G3DSA:1.10.3120.10 115 419 1.5E-81 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 SUPERFAMILY SSF54534 132 246 4.52E-26 T 14-10-2018 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 TIGRFAM TIGR00115 tig: trigger factor 13 414 2.1E-119 T 14-10-2018 IPR005215 Trigger factor GO:0015031 C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 SUPERFAMILY SSF109998 248 429 4.71E-37 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C4901_05775 59553bd3fe16528bd039eb1c69decba6 430 Gene3D G3DSA:3.30.70.1050 1 114 2.0E-31 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 C4901_09480 126dee3ed069beabec3fedae7678ca17 254 Gene3D G3DSA:3.10.350.10 38 80 4.5E-10 T 14-10-2018 IPR036779 LysM domain superfamily C4901_09480 126dee3ed069beabec3fedae7678ca17 254 SUPERFAMILY SSF51261 38 249 1.62E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif C4901_09480 126dee3ed069beabec3fedae7678ca17 254 SMART SM00257 38 82 1.5E-7 T 14-10-2018 IPR018392 LysM domain C4901_09480 126dee3ed069beabec3fedae7678ca17 254 Pfam PF01476 LysM domain 39 81 2.8E-9 T 14-10-2018 IPR018392 LysM domain C4901_09480 126dee3ed069beabec3fedae7678ca17 254 Gene3D G3DSA:2.70.70.10 116 250 2.0E-30 T 14-10-2018 IPR011055 Duplicated hybrid motif C4901_09480 126dee3ed069beabec3fedae7678ca17 254 Pfam PF01551 Peptidase family M23 152 245 9.4E-25 T 14-10-2018 IPR016047 Peptidase M23 C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 SUPERFAMILY SSF54523 35 134 1.62E-33 T 14-10-2018 C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 Gene3D G3DSA:3.30.700.10 23 139 1.6E-36 T 14-10-2018 C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 8 140 3.1E-50 T 14-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 1.8E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 1.1E-17 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 1.1E-17 T 14-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 2.0E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04970 e23dd3448a63b6d3896c6a4ed732092b 141 Pfam PF08334 Type II secretion system (T2SS), protein G 32 137 6.9E-35 T 14-10-2018 IPR013545 Type II secretion system protein G C4901_15185 480b19762ba5763132ade8c3fdb82170 788 Gene3D G3DSA:3.40.50.300 413 587 9.0E-32 T 14-10-2018 C4901_15185 480b19762ba5763132ade8c3fdb82170 788 SMART SM00487 417 595 2.6E-23 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_15185 480b19762ba5763132ade8c3fdb82170 788 Pfam PF00271 Helicase conserved C-terminal domain 637 737 3.4E-5 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_15185 480b19762ba5763132ade8c3fdb82170 788 SUPERFAMILY SSF52540 328 580 1.21E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15185 480b19762ba5763132ade8c3fdb82170 788 Pfam PF04851 Type III restriction enzyme, res subunit 420 562 1.4E-17 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 C4901_15185 480b19762ba5763132ade8c3fdb82170 788 Gene3D G3DSA:3.40.50.300 605 782 1.0E-28 T 14-10-2018 C4901_15185 480b19762ba5763132ade8c3fdb82170 788 SUPERFAMILY SSF52540 525 751 5.16E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_09840 241e8f5c4819578beaa96d0fcc6428b5 415 SUPERFAMILY SSF51905 2 207 2.59E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_09840 241e8f5c4819578beaa96d0fcc6428b5 415 SUPERFAMILY SSF51905 152 332 2.23E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_09840 241e8f5c4819578beaa96d0fcc6428b5 415 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 319 5.8E-37 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_09840 241e8f5c4819578beaa96d0fcc6428b5 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.8E-7 T 14-10-2018 C4901_09840 241e8f5c4819578beaa96d0fcc6428b5 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.8E-7 T 14-10-2018 C4901_09840 241e8f5c4819578beaa96d0fcc6428b5 415 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 1.8E-7 T 14-10-2018 C4901_09840 241e8f5c4819578beaa96d0fcc6428b5 415 Gene3D G3DSA:3.50.50.100 1 397 4.9E-104 T 14-10-2018 C4901_12175 57d5d545c28c4582a433b0558a51e6ff 132 SUPERFAMILY SSF143422 5 128 7.19E-39 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_12175 57d5d545c28c4582a433b0558a51e6ff 132 SMART SM01321 10 129 1.1E-37 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_12175 57d5d545c28c4582a433b0558a51e6ff 132 Gene3D G3DSA:3.30.70.1290 2 132 1.1E-40 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_12175 57d5d545c28c4582a433b0558a51e6ff 132 Pfam PF01797 Transposase IS200 like 11 128 5.9E-37 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_07530 35f55d666d3b03a29c80c947fd8e5993 252 Pfam PF00535 Glycosyl transferase family 2 15 106 9.4E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_07530 35f55d666d3b03a29c80c947fd8e5993 252 Gene3D G3DSA:3.90.550.10 2 228 3.6E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_07530 35f55d666d3b03a29c80c947fd8e5993 252 SUPERFAMILY SSF53448 11 209 3.38E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_15805 df326878b5f13d3280c8ce08bd8a6600 280 SUPERFAMILY SSF56925 193 277 1.73E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C4901_15805 df326878b5f13d3280c8ce08bd8a6600 280 Gene3D G3DSA:2.40.160.20 194 278 7.7E-10 T 14-10-2018 C4901_15805 df326878b5f13d3280c8ce08bd8a6600 280 Pfam PF13505 Outer membrane protein beta-barrel domain 183 277 2.5E-7 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel C4901_02795 7c9609f33c8aaba38715294591a2f5dd 132 Gene3D G3DSA:3.30.110.40 62 132 1.8E-10 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_02795 7c9609f33c8aaba38715294591a2f5dd 132 SUPERFAMILY SSF64307 60 131 2.35E-12 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_02795 7c9609f33c8aaba38715294591a2f5dd 132 Pfam PF01206 Sulfurtransferase TusA 63 131 4.5E-11 T 14-10-2018 IPR001455 TusA-like domain C4901_02795 7c9609f33c8aaba38715294591a2f5dd 132 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 64 88 - T 14-10-2018 IPR001455 TusA-like domain C4901_01865 1fc85f3ad1674d90f0af657328f75370 472 Gene3D G3DSA:2.60.40.10 307 385 5.9E-5 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_02130 7a4cec9a4a777b43e2ae48429f7ec9ad 250 SMART SM00470 8 94 2.0E-5 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C4901_02130 7a4cec9a4a777b43e2ae48429f7ec9ad 250 SUPERFAMILY SSF109709 101 186 8.5E-11 T 14-10-2018 C4901_02130 7a4cec9a4a777b43e2ae48429f7ec9ad 250 Pfam PF02195 ParB-like nuclease domain 9 78 9.0E-10 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C4901_02130 7a4cec9a4a777b43e2ae48429f7ec9ad 250 Gene3D G3DSA:3.90.1530.30 23 80 1.2E-5 T 14-10-2018 C4901_02130 7a4cec9a4a777b43e2ae48429f7ec9ad 250 Gene3D G3DSA:1.10.10.2830 86 199 2.5E-9 T 14-10-2018 C4901_02130 7a4cec9a4a777b43e2ae48429f7ec9ad 250 SUPERFAMILY SSF110849 4 96 5.41E-12 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily C4901_05585 b05c76aceeffdac11aa09380deeabf91 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 24 92 6.4E-20 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 C4901_05585 b05c76aceeffdac11aa09380deeabf91 344 Pfam PF01409 tRNA synthetases class II core domain (F) 97 342 4.6E-98 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 C4901_05585 b05c76aceeffdac11aa09380deeabf91 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 43 343 1.8E-93 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 C4901_05585 b05c76aceeffdac11aa09380deeabf91 344 SUPERFAMILY SSF46589 19 104 1.94E-19 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 C4901_05585 b05c76aceeffdac11aa09380deeabf91 344 Gene3D G3DSA:3.30.930.10 13 344 6.9E-112 T 14-10-2018 C4901_05585 b05c76aceeffdac11aa09380deeabf91 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 13 343 45.631 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 C4901_05585 b05c76aceeffdac11aa09380deeabf91 344 SUPERFAMILY SSF55681 97 342 2.1E-75 T 14-10-2018 C4901_12465 ffd9d52c749a5521c426c1b632e748c9 142 SUPERFAMILY SSF46955 1 124 1.47E-32 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_12465 ffd9d52c749a5521c426c1b632e748c9 142 SMART SM00422 1 70 3.3E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_12465 ffd9d52c749a5521c426c1b632e748c9 142 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_12465 ffd9d52c749a5521c426c1b632e748c9 142 Gene3D G3DSA:1.10.1660.10 1 125 8.1E-31 T 14-10-2018 C4901_12465 ffd9d52c749a5521c426c1b632e748c9 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 1.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_12465 ffd9d52c749a5521c426c1b632e748c9 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 1.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_12465 ffd9d52c749a5521c426c1b632e748c9 142 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 1.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_12465 ffd9d52c749a5521c426c1b632e748c9 142 Pfam PF13411 MerR HTH family regulatory protein 1 68 1.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_02935 e1aef4978b84b8e4beaf0d44fa1215b6 35 Pfam PF14487 Domain of unknown function (DUF4433) 1 35 1.1E-7 T 14-10-2018 IPR029494 Domain of unknown function DUF4433 C4901_08320 7d1d9d8796552802c0f913609cc53707 230 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 33 200 3.7E-69 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C4901_08320 7d1d9d8796552802c0f913609cc53707 230 SUPERFAMILY SSF55729 2 223 5.83E-83 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_08320 7d1d9d8796552802c0f913609cc53707 230 Gene3D G3DSA:3.40.630.70 58 225 1.2E-62 T 14-10-2018 C4901_08320 7d1d9d8796552802c0f913609cc53707 230 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 30 213 8.2E-58 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C4901_08320 7d1d9d8796552802c0f913609cc53707 230 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 230 87.484 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 C4901_08320 7d1d9d8796552802c0f913609cc53707 230 Gene3D G3DSA:2.30.210.20 1 57 3.1E-19 T 14-10-2018 C4901_16550 6836007bb1c52a4411d76511fe0fc30b 187 Pfam PF12804 MobA-like NTP transferase domain 10 157 1.4E-30 T 14-10-2018 IPR025877 MobA-like NTP transferase C4901_16550 6836007bb1c52a4411d76511fe0fc30b 187 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 186 8.7E-50 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 C4901_16550 6836007bb1c52a4411d76511fe0fc30b 187 Gene3D G3DSA:3.90.550.10 7 187 7.9E-43 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_16550 6836007bb1c52a4411d76511fe0fc30b 187 SUPERFAMILY SSF53448 7 186 1.8E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_16550 6836007bb1c52a4411d76511fe0fc30b 187 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 6 181 21.212 T 14-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 C4901_00835 f16c6482cecbbacee76b0de6a25ad1c2 605 Gene3D G3DSA:3.40.30.10 469 590 2.2E-25 T 14-10-2018 C4901_00835 f16c6482cecbbacee76b0de6a25ad1c2 605 SUPERFAMILY SSF74863 32 146 6.41E-27 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C4901_00835 f16c6482cecbbacee76b0de6a25ad1c2 605 Pfam PF11412 Disulphide bond corrector protein DsbC 32 146 1.0E-27 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain C4901_00835 f16c6482cecbbacee76b0de6a25ad1c2 605 Gene3D G3DSA:2.60.40.1250 26 160 5.0E-33 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C4901_00835 f16c6482cecbbacee76b0de6a25ad1c2 605 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 187 385 1.5E-14 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 C4901_00835 f16c6482cecbbacee76b0de6a25ad1c2 605 Pfam PF13899 Thioredoxin-like 489 562 9.5E-11 T 14-10-2018 C4901_00835 f16c6482cecbbacee76b0de6a25ad1c2 605 SUPERFAMILY SSF52833 475 585 1.03E-19 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_08165 721cd7911bfb5f2adbd2a565b0f655bd 357 Gene3D G3DSA:3.75.10.10 14 357 4.6E-118 T 14-10-2018 C4901_08165 721cd7911bfb5f2adbd2a565b0f655bd 357 Pfam PF04371 Porphyromonas-type peptidyl-arginine deiminase 17 352 5.1E-111 T 14-10-2018 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type GO:0004668|GO:0009446 KEGG: 00330+3.5.3.12|MetaCyc: PWY-43 C4901_08165 721cd7911bfb5f2adbd2a565b0f655bd 357 SUPERFAMILY SSF55909 16 353 2.14E-115 T 14-10-2018 C4901_04910 48675001ee8d8e65e9cdf117648cbcd5 116 SUPERFAMILY SSF47413 45 110 1.92E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_04910 48675001ee8d8e65e9cdf117648cbcd5 116 SMART SM00530 56 110 3.9E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_04910 48675001ee8d8e65e9cdf117648cbcd5 116 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 2 114 6.3E-39 T 14-10-2018 IPR022452 Antitoxin MqsA C4901_04910 48675001ee8d8e65e9cdf117648cbcd5 116 Gene3D G3DSA:1.10.260.40 46 114 1.6E-22 T 14-10-2018 C4901_04910 48675001ee8d8e65e9cdf117648cbcd5 116 Gene3D G3DSA:1.20.58.720 1 45 1.2E-18 T 14-10-2018 C4901_04910 48675001ee8d8e65e9cdf117648cbcd5 116 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 1 114 3.4E-53 T 14-10-2018 IPR032758 Antitoxin MqsA/HigA-2 C4901_04910 48675001ee8d8e65e9cdf117648cbcd5 116 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 2 30 3.3E-9 T 14-10-2018 IPR022453 Zinc finger, MqsA-type C4901_00550 94122d8c83a25b245c2696a119f74d70 611 Gene3D G3DSA:2.60.40.1250 34 177 8.7E-31 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C4901_00550 94122d8c83a25b245c2696a119f74d70 611 Pfam PF13899 Thioredoxin-like 499 581 2.4E-11 T 14-10-2018 C4901_00550 94122d8c83a25b245c2696a119f74d70 611 Pfam PF11412 Disulphide bond corrector protein DsbC 42 158 2.9E-24 T 14-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain C4901_00550 94122d8c83a25b245c2696a119f74d70 611 SUPERFAMILY SSF74863 41 157 3.01E-25 T 14-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily C4901_00550 94122d8c83a25b245c2696a119f74d70 611 SUPERFAMILY SSF52833 487 603 1.12E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_00550 94122d8c83a25b245c2696a119f74d70 611 Gene3D G3DSA:3.40.30.10 483 609 1.9E-25 T 14-10-2018 C4901_00550 94122d8c83a25b245c2696a119f74d70 611 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 200 408 4.6E-19 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 SUPERFAMILY SSF81665 16 773 1.28E-58 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Gene3D G3DSA:1.20.1110.10 48 111 1.1E-5 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Gene3D G3DSA:1.20.1110.10 496 772 3.1E-50 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Gene3D G3DSA:1.20.1110.10 198 321 1.8E-18 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Pfam PF00122 E1-E2 ATPase 108 282 3.6E-43 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 486 1.4E-54 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 502 611 4.5E-28 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 SMART SM00831 4 71 6.6E-7 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 SUPERFAMILY SSF81653 109 205 1.7E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Gene3D G3DSA:3.40.1110.10 322 440 6.3E-22 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Pfam PF00702 haloacid dehalogenase-like hydrolase 303 544 5.9E-24 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 SUPERFAMILY SSF56784 303 623 7.21E-43 T 14-10-2018 IPR036412 HAD-like superfamily C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Pfam PF00690 Cation transporter/ATPase, N-terminus 15 62 1.2E-8 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Gene3D G3DSA:3.40.50.1000 441 489 2.2E-8 T 14-10-2018 IPR023214 HAD superfamily C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 Gene3D G3DSA:2.60.120.1500 112 197 2.1E-29 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 TIGRFAM TIGR01647 ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 18 737 2.4E-200 T 14-10-2018 IPR006534 P-type ATPase, subfamily IIIA GO:0008553|GO:0016021|GO:0120029 KEGG: 00190+3.6.3.6 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 531 547 1.5E-21 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 693 714 1.5E-21 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 411 429 1.5E-21 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 562 587 1.5E-21 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 SUPERFAMILY SSF81660 310 452 3.43E-17 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 306 312 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 472 6.0E-41 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 531 550 6.0E-41 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 155 169 6.0E-41 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 440 451 6.0E-41 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 554 566 6.0E-41 T 14-10-2018 C4901_02335 b94dc9c565a4a88f8bdf3b4fdbc00c1c 786 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 304 318 6.0E-41 T 14-10-2018 C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 SUPERFAMILY SSF53448 12 384 7.04E-78 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 21 40 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 Pfam PF00483 Nucleotidyl transferase 17 280 2.2E-64 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 107 115 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 205 215 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 Gene3D G3DSA:3.90.550.10 6 290 6.1E-85 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 12 414 50.558 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 SUPERFAMILY SSF51161 301 408 1.77E-16 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 15 388 1.9E-151 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 C4901_05930 4ab45b96ced7e13ee1f702410250f76c 421 Gene3D G3DSA:2.160.10.10 291 420 1.6E-35 T 14-10-2018 C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 Pfam PF12848 ABC transporter 215 289 6.0E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 Pfam PF00005 ABC transporter 329 457 2.6E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 Gene3D G3DSA:3.40.50.300 272 535 1.9E-48 T 14-10-2018 C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 Gene3D G3DSA:3.40.50.300 1 256 9.8E-62 T 14-10-2018 C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 SMART SM00382 335 502 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 SMART SM00382 26 220 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 Pfam PF00005 ABC transporter 18 175 2.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 SUPERFAMILY SSF52540 2 232 9.28E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 SUPERFAMILY SSF52540 298 515 6.53E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_09715 723c8b65cb91ee6e7d857c0aab5339fa 617 ProSitePatterns PS00211 ABC transporters family signature. 429 443 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 SMART SM00052 718 964 5.5E-80 T 14-10-2018 IPR001633 EAL domain C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 SUPERFAMILY SSF55781 388 546 1.88E-18 T 14-10-2018 C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 Gene3D G3DSA:3.30.450.40 341 543 2.9E-20 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 SMART SM00267 535 708 9.8E-55 T 14-10-2018 IPR000160 GGDEF domain C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 Pfam PF13185 GAF domain 388 534 2.7E-15 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 544 706 1.2E-37 T 14-10-2018 IPR000160 GGDEF domain C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 Pfam PF00563 EAL domain 727 959 3.1E-63 T 14-10-2018 IPR001633 EAL domain C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 SMART SM00065 388 543 7.7E-4 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 SUPERFAMILY SSF55073 551 710 9.42E-44 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 Gene3D G3DSA:3.30.70.270 544 720 5.5E-53 T 14-10-2018 C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 Pfam PF00990 Diguanylate cyclase, GGDEF domain 546 703 1.1E-41 T 14-10-2018 IPR000160 GGDEF domain C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 SUPERFAMILY SSF141868 725 978 8.63E-73 T 14-10-2018 IPR035919 EAL domain superfamily C4901_14320 88f5fb55d5b4b49254a35405b9b43d32 1095 Gene3D G3DSA:3.20.20.450 721 973 6.0E-79 T 14-10-2018 IPR035919 EAL domain superfamily C4901_04015 41168d5acba6b8360805c4a876478aa3 398 SUPERFAMILY SSF102645 181 393 1.96E-71 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C4901_04015 41168d5acba6b8360805c4a876478aa3 398 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 5 388 3.0E-122 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 C4901_04015 41168d5acba6b8360805c4a876478aa3 398 SUPERFAMILY SSF52507 2 177 2.88E-53 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 C4901_04015 41168d5acba6b8360805c4a876478aa3 398 Gene3D G3DSA:3.40.50.10300 180 396 2.6E-69 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C4901_04015 41168d5acba6b8360805c4a876478aa3 398 Gene3D G3DSA:3.40.50.1950 2 179 4.5E-53 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 C4901_04015 41168d5acba6b8360805c4a876478aa3 398 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 182 364 7.4E-64 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 C4901_04015 41168d5acba6b8360805c4a876478aa3 398 Pfam PF02441 Flavoprotein 8 172 5.4E-41 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 159 183 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 70 94 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 47 69 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 284 297 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 256 282 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 232 250 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 188 211 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 116 139 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 214 231 6.4E-120 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 Gene3D G3DSA:4.10.480.10 229 341 2.1E-44 T 14-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 16 34 1.6E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 Gene3D G3DSA:3.40.50.700 46 226 1.3E-71 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 3 354 2.7E-165 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 62 207 5.8E-30 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 SUPERFAMILY SSF56770 47 310 5.83E-90 T 14-10-2018 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 PIRSF PIRSF000310 5 357 1.1E-141 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 C4901_12260 fd252c950d70ff38b4e619fa4c603294 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 227 306 1.2E-31 T 14-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal C4901_08035 35fc42889509f830c2b7bbc49ebd0ceb 172 Pfam PF01782 RimM N-terminal domain 11 93 4.0E-18 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 C4901_08035 35fc42889509f830c2b7bbc49ebd0ceb 172 Pfam PF05239 PRC-barrel domain 101 167 6.2E-5 T 14-10-2018 IPR027275 PRC-barrel domain C4901_08035 35fc42889509f830c2b7bbc49ebd0ceb 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 9 171 2.9E-41 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 C4901_08035 35fc42889509f830c2b7bbc49ebd0ceb 172 Gene3D G3DSA:2.40.30.60 2 96 2.5E-24 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 C4901_08035 35fc42889509f830c2b7bbc49ebd0ceb 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 9 172 21.349 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 C4901_08035 35fc42889509f830c2b7bbc49ebd0ceb 172 SUPERFAMILY SSF50447 8 96 2.08E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_08035 35fc42889509f830c2b7bbc49ebd0ceb 172 Gene3D G3DSA:2.30.30.240 103 172 5.7E-24 T 14-10-2018 C4901_08035 35fc42889509f830c2b7bbc49ebd0ceb 172 SUPERFAMILY SSF50346 103 172 1.96E-18 T 14-10-2018 IPR011033 PRC-barrel-like superfamily C4901_01535 82ff9c2af4ad4d672483a9a855fd26e6 287 SUPERFAMILY SSF52540 33 250 9.82E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01535 82ff9c2af4ad4d672483a9a855fd26e6 287 Gene3D G3DSA:3.40.50.300 39 207 3.5E-30 T 14-10-2018 C4901_01535 82ff9c2af4ad4d672483a9a855fd26e6 287 Pfam PF07728 AAA domain (dynein-related subfamily) 55 189 3.8E-32 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 C4901_01535 82ff9c2af4ad4d672483a9a855fd26e6 287 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 202 284 1.0E-29 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal C4901_10125 4f2f08dd163033215db2060dc0301b9e 306 SUPERFAMILY SSF46785 1 84 5.21E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_10125 4f2f08dd163033215db2060dc0301b9e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.5E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_10125 4f2f08dd163033215db2060dc0301b9e 306 Pfam PF03466 LysR substrate binding domain 92 296 1.9E-50 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_10125 4f2f08dd163033215db2060dc0301b9e 306 SUPERFAMILY SSF53850 94 299 1.85E-45 T 14-10-2018 C4901_10125 4f2f08dd163033215db2060dc0301b9e 306 Gene3D G3DSA:3.40.190.290 95 303 3.4E-45 T 14-10-2018 C4901_10125 4f2f08dd163033215db2060dc0301b9e 306 Gene3D G3DSA:1.10.10.10 8 73 5.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_03065 d37cb42c6d4933f71327ef117e11602a 593 SUPERFAMILY SSF51004 264 564 6.54E-23 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily C4901_03065 d37cb42c6d4933f71327ef117e11602a 593 Gene3D G3DSA:2.130.10.10 58 343 7.8E-24 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_03065 d37cb42c6d4933f71327ef117e11602a 593 Gene3D G3DSA:2.130.10.10 344 520 8.9E-23 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_03065 d37cb42c6d4933f71327ef117e11602a 593 SUPERFAMILY SSF50974 77 332 1.26E-13 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 C4901_03065 d37cb42c6d4933f71327ef117e11602a 593 Pfam PF10282 Lactonase, 7-bladed beta-propeller 221 334 4.7E-9 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller C4901_03065 d37cb42c6d4933f71327ef117e11602a 593 Pfam PF10282 Lactonase, 7-bladed beta-propeller 423 508 3.4E-8 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller C4901_01190 60c24db65532dd4257b5af56bc0a39d3 347 SUPERFAMILY SSF52402 5 248 3.75E-32 T 14-10-2018 C4901_01190 60c24db65532dd4257b5af56bc0a39d3 347 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 6 147 4.0E-11 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 C4901_01190 60c24db65532dd4257b5af56bc0a39d3 347 Gene3D G3DSA:3.40.50.620 4 166 3.6E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_06510 91c1c60a413c06bf04ccbe66889d2557 338 Pfam PF01609 Transposase DDE domain 176 312 1.5E-5 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_16025 0db42b23e12c1f1f5366a8d537106348 299 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 12 295 29.504 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 C4901_16025 0db42b23e12c1f1f5366a8d537106348 299 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site C4901_16025 0db42b23e12c1f1f5366a8d537106348 299 Gene3D G3DSA:1.10.357.140 30 178 4.3E-41 T 14-10-2018 C4901_16025 0db42b23e12c1f1f5366a8d537106348 299 Pfam PF01040 UbiA prenyltransferase family 35 277 6.4E-61 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 C4901_16025 0db42b23e12c1f1f5366a8d537106348 299 Gene3D G3DSA:1.20.120.1780 179 298 5.6E-12 T 14-10-2018 C4901_16025 0db42b23e12c1f1f5366a8d537106348 299 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 19 294 7.0E-102 T 14-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 C4901_00600 596c6ae6794af015524d1e00869ccaed 245 Gene3D G3DSA:3.40.50.720 7 245 5.6E-69 T 14-10-2018 C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 8.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 8.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 8.5E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 SUPERFAMILY SSF51735 9 244 2.3E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_00600 596c6ae6794af015524d1e00869ccaed 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 244 3.5E-48 T 14-10-2018 C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 6.8E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_00600 596c6ae6794af015524d1e00869ccaed 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 193 7.7E-4 T 14-10-2018 C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 Pfam PF00563 EAL domain 444 676 1.3E-71 T 14-10-2018 IPR001633 EAL domain C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 SMART SM00052 438 681 3.5E-91 T 14-10-2018 IPR001633 EAL domain C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 Pfam PF00672 HAMP domain 176 223 4.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 SMART SM00304 174 226 1.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 SUPERFAMILY SSF158472 177 223 1.26E-5 T 14-10-2018 C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 SUPERFAMILY SSF141868 443 687 6.93E-81 T 14-10-2018 IPR035919 EAL domain superfamily C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 260 418 6.0E-42 T 14-10-2018 IPR000160 GGDEF domain C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 Gene3D G3DSA:3.30.70.270 258 425 1.9E-55 T 14-10-2018 C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 Pfam PF00990 Diguanylate cyclase, GGDEF domain 264 418 6.6E-47 T 14-10-2018 IPR000160 GGDEF domain C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 Gene3D G3DSA:3.20.20.450 441 693 2.8E-86 T 14-10-2018 IPR035919 EAL domain superfamily C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 SUPERFAMILY SSF55073 269 419 1.41E-45 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 SMART SM00267 253 425 1.8E-57 T 14-10-2018 IPR000160 GGDEF domain C4901_16725 a55632dbf79dbb93e08d5cc79ed50586 701 Gene3D G3DSA:1.20.1480.50 140 231 6.3E-8 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 11 81 1.5E-11 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Pfam PF00384 Molybdopterin oxidoreductase 321 744 2.2E-80 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Pfam PF01568 Molydopterin dinucleotide binding domain 829 934 2.9E-14 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 89 129 8.2E-9 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Gene3D G3DSA:3.40.228.10 399 598 2.1E-159 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Gene3D G3DSA:3.10.20.740 10 130 5.7E-25 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 868 895 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Gene3D G3DSA:2.40.40.20 817 944 5.9E-26 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 SUPERFAMILY SSF53706 260 829 1.44E-181 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 SUPERFAMILY SSF54292 12 79 1.85E-12 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_04030 b86e27621a2bf200e1702463245b2409 991 PIRSF PIRSF036643 7 971 0.0 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Pfam PF12838 4Fe-4S dicluster domain 152 210 2.8E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_04030 b86e27621a2bf200e1702463245b2409 991 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 266 318 8.2E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04030 b86e27621a2bf200e1702463245b2409 991 SUPERFAMILY SSF50692 801 938 2.94E-30 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C4901_04030 b86e27621a2bf200e1702463245b2409 991 SMART SM00929 89 130 4.7E-12 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Gene3D G3DSA:3.40.50.740 326 787 2.1E-159 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Gene3D G3DSA:2.20.25.90 266 319 4.9E-17 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 SUPERFAMILY SSF54862 87 215 8.37E-27 T 14-10-2018 C4901_04030 b86e27621a2bf200e1702463245b2409 991 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_04030 b86e27621a2bf200e1702463245b2409 991 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 270 937 9.1E-238 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 C4901_04030 b86e27621a2bf200e1702463245b2409 991 SMART SM00926 265 318 4.8E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04030 b86e27621a2bf200e1702463245b2409 991 Gene3D G3DSA:3.30.70.20 133 214 4.9E-20 T 14-10-2018 C4901_00910 0fbd4a4790afb4700c92231ce500e19c 252 Pfam PF01209 ubiE/COQ5 methyltransferase family 22 251 1.4E-87 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C4901_00910 0fbd4a4790afb4700c92231ce500e19c 252 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 26 251 4.3E-78 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C4901_00910 0fbd4a4790afb4700c92231ce500e19c 252 Gene3D G3DSA:3.40.50.150 32 252 2.9E-71 T 14-10-2018 C4901_00910 0fbd4a4790afb4700c92231ce500e19c 252 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 37 52 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 C4901_00910 0fbd4a4790afb4700c92231ce500e19c 252 SUPERFAMILY SSF53335 18 250 7.59E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_00910 0fbd4a4790afb4700c92231ce500e19c 252 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 17 251 37.287 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 C4901_02985 3784b2419d9ab8f644b92d2402f14a1a 99 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 7.5E-32 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 C4901_02985 3784b2419d9ab8f644b92d2402f14a1a 99 SUPERFAMILY SSF69754 3 98 2.88E-33 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C4901_02985 3784b2419d9ab8f644b92d2402f14a1a 99 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 1.7E-24 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 C4901_02985 3784b2419d9ab8f644b92d2402f14a1a 99 Gene3D G3DSA:3.30.160.100 1 97 8.5E-34 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like C4901_01165 adc1fcba2f6062a605ec8756b589806b 184 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 3 143 2.1E-42 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 C4901_01165 adc1fcba2f6062a605ec8756b589806b 184 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 2 146 3.2E-30 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 C4901_01165 adc1fcba2f6062a605ec8756b589806b 184 PIRSF PIRSF004682 1 179 1.5E-53 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 C4901_01165 adc1fcba2f6062a605ec8756b589806b 184 Gene3D G3DSA:3.40.50.1000 2 180 3.4E-50 T 14-10-2018 IPR023214 HAD superfamily C4901_01165 adc1fcba2f6062a605ec8756b589806b 184 SUPERFAMILY SSF56784 1 176 2.85E-42 T 14-10-2018 IPR036412 HAD-like superfamily C4901_01165 adc1fcba2f6062a605ec8756b589806b 184 Pfam PF13242 HAD-hyrolase-like 99 151 4.3E-9 T 14-10-2018 C4901_08985 49eddb963bd7fa1105a43d45b1d352bd 334 Gene3D G3DSA:3.40.50.2000 165 293 3.4E-19 T 14-10-2018 C4901_08985 49eddb963bd7fa1105a43d45b1d352bd 334 SUPERFAMILY SSF53756 53 302 1.67E-23 T 14-10-2018 C4901_08985 49eddb963bd7fa1105a43d45b1d352bd 334 Pfam PF00534 Glycosyl transferases group 1 196 286 2.0E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_10155 56f3bb9e5891822aaedb93c318c032f5 86 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 5 66 27.18 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C4901_10155 56f3bb9e5891822aaedb93c318c032f5 86 SUPERFAMILY SSF50182 9 71 8.66E-24 T 14-10-2018 IPR010920 LSM domain superfamily C4901_10155 56f3bb9e5891822aaedb93c318c032f5 86 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 7 66 6.3E-29 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C4901_10155 56f3bb9e5891822aaedb93c318c032f5 86 Pfam PF17209 Hfq protein 9 71 9.0E-31 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 C4901_10155 56f3bb9e5891822aaedb93c318c032f5 86 Gene3D G3DSA:2.30.30.100 2 73 1.6E-31 T 14-10-2018 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 16.207 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.3E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 7.3E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 7.3E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 Pfam PF01632 Ribosomal protein L35 2 61 2.2E-19 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 Gene3D G3DSA:2.40.50.530 1 64 2.0E-17 T 14-10-2018 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 7.3E-23 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 C4901_05575 281da73c25c6b4849458fd749c6d3247 64 SUPERFAMILY SSF143034 2 63 2.22E-19 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_16455 aa4f94384443d6756b7082101908d58c 126 SUPERFAMILY SSF88723 1 119 2.8E-17 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_16455 aa4f94384443d6756b7082101908d58c 126 Pfam PF01850 PIN domain 4 113 1.5E-9 T 14-10-2018 IPR002716 PIN domain C4901_16455 aa4f94384443d6756b7082101908d58c 126 Gene3D G3DSA:3.40.50.1010 3 121 1.5E-21 T 14-10-2018 C4901_13855 4245c16faa3945594a5d15170345aefe 112 SMART SM00411 17 109 8.6E-6 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_13855 4245c16faa3945594a5d15170345aefe 112 Gene3D G3DSA:4.10.520.10 17 111 5.1E-17 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C4901_13855 4245c16faa3945594a5d15170345aefe 112 Pfam PF00216 Bacterial DNA-binding protein 17 109 8.6E-18 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_13855 4245c16faa3945594a5d15170345aefe 112 SUPERFAMILY SSF47729 17 110 5.3E-16 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C4901_09905 6f6713dc274187474e30f3c8ab468de0 138 Gene3D G3DSA:1.10.1660.10 1 127 4.5E-36 T 14-10-2018 C4901_09905 6f6713dc274187474e30f3c8ab468de0 138 SUPERFAMILY SSF46955 3 126 6.23E-34 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_09905 6f6713dc274187474e30f3c8ab468de0 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 7.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_09905 6f6713dc274187474e30f3c8ab468de0 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 7.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_09905 6f6713dc274187474e30f3c8ab468de0 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 7.4E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_09905 6f6713dc274187474e30f3c8ab468de0 138 SMART SM00422 2 71 4.1E-29 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_09905 6f6713dc274187474e30f3c8ab468de0 138 Pfam PF00376 MerR family regulatory protein 3 40 1.3E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 C4901_09905 6f6713dc274187474e30f3c8ab468de0 138 Pfam PF09278 MerR, DNA binding 45 109 1.8E-18 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding C4901_09020 31240eefa0d741dfda67511802c175e1 313 SMART SM00710 203 225 130.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_09020 31240eefa0d741dfda67511802c175e1 313 SMART SM00710 179 201 31.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_09020 31240eefa0d741dfda67511802c175e1 313 SMART SM00710 150 178 18.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_09020 31240eefa0d741dfda67511802c175e1 313 Pfam PF13229 Right handed beta helix region 84 228 1.2E-10 T 14-10-2018 IPR039448 Right handed beta helix domain C4901_09020 31240eefa0d741dfda67511802c175e1 313 SUPERFAMILY SSF51126 3 226 6.13E-43 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C4901_09020 31240eefa0d741dfda67511802c175e1 313 Gene3D G3DSA:2.160.20.10 5 245 1.3E-44 T 14-10-2018 IPR012334 Pectin lyase fold C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 Pfam PF00989 PAS fold 288 396 1.5E-15 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 Pfam PF00512 His Kinase A (phospho-acceptor) domain 554 616 7.3E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SUPERFAMILY SSF47384 535 618 3.53E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SUPERFAMILY SSF55874 620 772 9.82E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SUPERFAMILY SSF55785 398 523 3.32E-10 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SMART SM00387 661 773 5.1E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 662 772 3.7E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 700 714 1.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 757 770 1.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 PRINTS PR00344 Bacterial sensor protein C-terminal signature 733 751 1.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SUPERFAMILY SSF55785 296 407 2.62E-25 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SMART SM00388 552 620 4.0E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 Pfam PF13188 PAS domain 413 467 0.0011 T 14-10-2018 IPR000014 PAS domain C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 Gene3D G3DSA:3.30.450.20 400 520 3.6E-11 T 14-10-2018 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 Gene3D G3DSA:1.10.287.130 521 618 1.9E-19 T 14-10-2018 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 288 407 5.9E-29 T 14-10-2018 IPR000014 PAS domain C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 Gene3D G3DSA:3.30.450.20 282 399 1.2E-34 T 14-10-2018 C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 Gene3D G3DSA:3.30.565.10 622 771 1.5E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SMART SM00086 361 400 0.82 T 14-10-2018 IPR001610 PAC motif C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SMART SM00086 485 525 11.0 T 14-10-2018 IPR001610 PAC motif C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SMART SM00091 285 351 1.4E-12 T 14-10-2018 IPR000014 PAS domain C4901_13480 b7d874215db1d20ac1e368a8dc4d05c0 780 SMART SM00091 412 481 120.0 T 14-10-2018 IPR000014 PAS domain C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Pfam PF00873 AcrB/AcrD/AcrF family 6 1030 2.9E-221 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.7E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 PRINTS PR00702 Acriflavin resistance protein family signature 390 414 4.7E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 PRINTS PR00702 Acriflavin resistance protein family signature 362 383 4.7E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 PRINTS PR00702 Acriflavin resistance protein family signature 555 572 4.7E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 PRINTS PR00702 Acriflavin resistance protein family signature 335 358 4.7E-19 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 SUPERFAMILY SSF82866 294 503 4.05E-35 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 SUPERFAMILY SSF82866 815 1036 2.35E-41 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Gene3D G3DSA:1.20.1640.10 16 509 4.2E-237 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Gene3D G3DSA:3.30.2090.10 181 276 4.2E-237 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 SUPERFAMILY SSF82693 140 323 3.14E-14 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Gene3D G3DSA:1.20.1640.10 510 1027 4.2E-237 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Gene3D G3DSA:3.30.70.1430 42 824 4.2E-237 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Gene3D G3DSA:3.30.70.1320 136 330 4.2E-237 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 SUPERFAMILY SSF82714 723 810 1.83E-9 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Gene3D G3DSA:3.30.70.1430 573 673 4.2E-237 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 SUPERFAMILY SSF82714 185 268 3.66E-10 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 SUPERFAMILY SSF82693 43 132 1.44E-20 T 14-10-2018 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1037 3.1E-216 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Gene3D G3DSA:3.30.2090.10 725 816 4.2E-237 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_03910 063e220c1a9334b1dfa5a709f2fcf041 1042 Gene3D G3DSA:3.30.70.1440 674 875 4.2E-237 T 14-10-2018 C4901_04000 9be14866e3478dad921ce2bf228eb4d5 174 Gene3D G3DSA:3.30.310.70 46 168 7.8E-11 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_04000 9be14866e3478dad921ce2bf228eb4d5 174 Pfam PF03625 Domain of unknown function DUF302 79 137 1.8E-12 T 14-10-2018 IPR005180 Domain of unknown function DUF302 C4901_04000 9be14866e3478dad921ce2bf228eb4d5 174 SUPERFAMILY SSF103247 53 166 7.98E-20 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_15650 b76a5286057e740aea9e32661a90f11e 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 287 1.8E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C4901_15650 b76a5286057e740aea9e32661a90f11e 297 Gene3D G3DSA:1.10.3720.10 84 292 2.8E-17 T 14-10-2018 IPR035906 MetI-like superfamily C4901_15650 b76a5286057e740aea9e32661a90f11e 297 SUPERFAMILY SSF161098 90 281 4.21E-22 T 14-10-2018 IPR035906 MetI-like superfamily C4901_11255 3ca66444c1af52fbf50cbebc2972f1f3 451 SUPERFAMILY SSF103473 26 434 1.57E-32 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_11255 3ca66444c1af52fbf50cbebc2972f1f3 451 Pfam PF07690 Major Facilitator Superfamily 35 329 5.4E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_11255 3ca66444c1af52fbf50cbebc2972f1f3 451 Gene3D G3DSA:1.20.1250.20 23 436 1.5E-27 T 14-10-2018 C4901_04565 b9912288925cdc87ae830c0a3496c120 200 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 88 148 7.0E-19 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04565 b9912288925cdc87ae830c0a3496c120 200 Gene3D G3DSA:3.30.460.80 1 140 4.1E-44 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04565 b9912288925cdc87ae830c0a3496c120 200 ProSitePatterns PS00542 Respiratory chain NADH dehydrogenase 30 Kd subunit signature. 121 142 - T 14-10-2018 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04565 b9912288925cdc87ae830c0a3496c120 200 SUPERFAMILY SSF143243 10 183 1.83E-54 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04565 b9912288925cdc87ae830c0a3496c120 200 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 6 168 32.98 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04565 b9912288925cdc87ae830c0a3496c120 200 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 34 161 1.5E-44 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04565 b9912288925cdc87ae830c0a3496c120 200 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 33 159 4.3E-40 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_01520 d5cb1eddc04961fbe863c176ed767c52 400 Pfam PF07592 Rhodopirellula transposase DDE domain 89 395 5.0E-137 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_02165 bc5344630e1056d96ebd91ffcdfd7b88 261 SUPERFAMILY SSF69618 7 254 2.75E-56 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02165 bc5344630e1056d96ebd91ffcdfd7b88 261 Gene3D G3DSA:3.40.50.10090 38 171 2.0E-70 T 14-10-2018 C4901_02165 bc5344630e1056d96ebd91ffcdfd7b88 261 Pfam PF02602 Uroporphyrinogen-III synthase HemD 23 248 3.1E-43 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 C4901_02165 bc5344630e1056d96ebd91ffcdfd7b88 261 Gene3D G3DSA:3.40.50.10090 9 247 2.0E-70 T 14-10-2018 C4901_07555 056f4ae0b4e69b15bc8762834203c0b8 433 Pfam PF01139 tRNA-splicing ligase RtcB 125 346 2.7E-11 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 C4901_07555 056f4ae0b4e69b15bc8762834203c0b8 433 SUPERFAMILY SSF103365 5 346 8.24E-13 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 C4901_07555 056f4ae0b4e69b15bc8762834203c0b8 433 Gene3D G3DSA:3.90.1860.10 1 415 3.3E-15 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 C4901_05000 0d6c1680d2c665f61dfff49584b049af 166 Pfam PF04612 Type II secretion system (T2SS), protein M 9 163 3.4E-28 T 14-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 C4901_01820 2122d20ff0b2c66536d3612807b68f17 195 Pfam PF13302 Acetyltransferase (GNAT) domain 20 162 1.7E-24 T 14-10-2018 IPR000182 GNAT domain C4901_01820 2122d20ff0b2c66536d3612807b68f17 195 Gene3D G3DSA:3.40.630.30 13 187 1.9E-38 T 14-10-2018 C4901_01820 2122d20ff0b2c66536d3612807b68f17 195 SUPERFAMILY SSF55729 13 187 2.34E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_17100 1a4f1467dd42b64f599b573c62576ae7 684 Gene3D G3DSA:3.10.620.30 376 513 3.6E-18 T 14-10-2018 C4901_17100 1a4f1467dd42b64f599b573c62576ae7 684 SUPERFAMILY SSF54001 305 629 2.24E-48 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C4901_17100 1a4f1467dd42b64f599b573c62576ae7 684 Pfam PF13559 Domain of unknown function (DUF4129) 609 678 2.1E-8 T 14-10-2018 IPR025403 Domain of unknown function DUF4129 C4901_17100 1a4f1467dd42b64f599b573c62576ae7 684 SMART SM00460 429 499 1.6E-21 T 14-10-2018 IPR002931 Transglutaminase-like C4901_17100 1a4f1467dd42b64f599b573c62576ae7 684 Pfam PF01841 Transglutaminase-like superfamily 387 497 3.4E-23 T 14-10-2018 IPR002931 Transglutaminase-like C4901_17100 1a4f1467dd42b64f599b573c62576ae7 684 Pfam PF11992 Domain of unknown function (DUF3488) 56 354 2.9E-70 T 14-10-2018 IPR021878 Protein of unknown function DUF3488 C4901_02725 b84f5c24b170ee2eb7108cf318d124fb 147 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 110 120 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site C4901_02725 b84f5c24b170ee2eb7108cf318d124fb 147 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 2 144 20.423 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C4901_02725 b84f5c24b170ee2eb7108cf318d124fb 147 Gene3D G3DSA:3.40.390.30 1 147 2.2E-43 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 C4901_02725 b84f5c24b170ee2eb7108cf318d124fb 147 Pfam PF02130 Uncharacterized protein family UPF0054 22 139 1.5E-30 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C4901_02725 b84f5c24b170ee2eb7108cf318d124fb 147 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 37 140 9.6E-29 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 C4901_02725 b84f5c24b170ee2eb7108cf318d124fb 147 SUPERFAMILY SSF55486 3 146 2.93E-39 T 14-10-2018 C4901_11620 2fe19b38b50c78da91b954de39db7350 139 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 131 10.19 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_11620 2fe19b38b50c78da91b954de39db7350 139 Gene3D G3DSA:3.40.50.1010 2 136 6.8E-34 T 14-10-2018 C4901_11620 2fe19b38b50c78da91b954de39db7350 139 Pfam PF01850 PIN domain 3 120 1.4E-14 T 14-10-2018 IPR002716 PIN domain C4901_11620 2fe19b38b50c78da91b954de39db7350 139 SUPERFAMILY SSF88723 1 135 1.07E-25 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 Gene3D G3DSA:1.20.1560.10 161 474 7.1E-59 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 Pfam PF03412 Peptidase C39 family 19 145 4.3E-31 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 Pfam PF00005 ABC transporter 505 654 1.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 Gene3D G3DSA:3.40.50.300 486 716 8.7E-69 T 14-10-2018 C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 Gene3D G3DSA:3.90.70.10 9 154 2.8E-34 T 14-10-2018 C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 SUPERFAMILY SSF52540 483 701 1.0E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 Pfam PF00664 ABC transporter transmembrane region 184 441 5.7E-35 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 SMART SM00382 514 697 8.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_07445 f2bc5b08123cdc6ad5fb6eb058899db1 718 SUPERFAMILY SSF90123 162 472 5.49E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_14100 048819f247d3f54b8dced05d2f71b6fa 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 7.9E-40 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14100 048819f247d3f54b8dced05d2f71b6fa 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14100 048819f247d3f54b8dced05d2f71b6fa 113 Gene3D G3DSA:3.90.470.10 1 112 1.6E-41 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14100 048819f247d3f54b8dced05d2f71b6fa 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 3.1E-35 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 C4901_14100 048819f247d3f54b8dced05d2f71b6fa 113 SUPERFAMILY SSF54843 2 108 1.83E-38 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14100 048819f247d3f54b8dced05d2f71b6fa 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 26.326 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_00800 278e44dd14a8fe4b27e6b06c480138d0 105 SUPERFAMILY SSF48452 6 83 2.61E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_00800 278e44dd14a8fe4b27e6b06c480138d0 105 Pfam PF13432 Tetratricopeptide repeat 22 81 4.7E-11 T 14-10-2018 C4901_00800 278e44dd14a8fe4b27e6b06c480138d0 105 Gene3D G3DSA:1.25.40.10 2 104 9.2E-26 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_00800 278e44dd14a8fe4b27e6b06c480138d0 105 SMART SM00028 51 84 0.95 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_00800 278e44dd14a8fe4b27e6b06c480138d0 105 SMART SM00028 17 50 0.76 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_01085 7ab3f742dd7d184a66f8802b5b6f0d5a 344 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 252 6.4E-49 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C4901_01085 7ab3f742dd7d184a66f8802b5b6f0d5a 344 Gene3D G3DSA:3.40.50.720 4 320 5.6E-111 T 14-10-2018 C4901_01085 7ab3f742dd7d184a66f8802b5b6f0d5a 344 Gene3D G3DSA:3.90.25.10 195 333 5.6E-111 T 14-10-2018 C4901_01085 7ab3f742dd7d184a66f8802b5b6f0d5a 344 SUPERFAMILY SSF51735 4 338 2.5E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 PIRSF PIRSF001456 3 362 3.8E-141 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 Gene3D G3DSA:3.60.150.10 1 362 3.0E-154 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 TIGRFAM TIGR00033 aroC: chorismate synthase 11 350 2.6E-137 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.91 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 Pfam PF01264 Chorismate synthase 10 345 5.1E-140 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08425 b12588a48e33764ac93ba4d5ef81fe02 366 SUPERFAMILY SSF103263 4 352 2.22E-147 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 Gene3D G3DSA:3.40.710.10 282 468 6.2E-52 T 14-10-2018 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 55 441 2.9E-55 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 365 379 5.7E-17 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 292 314 5.7E-17 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 427 440 5.7E-17 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 5.7E-17 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 65 84 5.7E-17 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 Gene3D G3DSA:3.50.80.20 89 177 2.9E-17 T 14-10-2018 C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 SUPERFAMILY SSF56601 24 470 5.64E-85 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C4901_08095 a652b7849a7ce21d3298fb68793f19a5 472 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 43 463 2.1E-74 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_08085 4c5402b28c474908f10127d789a9c7c2 364 Gene3D G3DSA:3.30.70.100 254 347 3.7E-5 T 14-10-2018 C4901_08085 4c5402b28c474908f10127d789a9c7c2 364 SUPERFAMILY SSF82689 255 346 1.7E-6 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 C4901_08085 4c5402b28c474908f10127d789a9c7c2 364 SUPERFAMILY SSF82861 101 185 2.88E-10 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 C4901_08085 4c5402b28c474908f10127d789a9c7c2 364 Pfam PF00924 Mechanosensitive ion channel 145 344 8.3E-44 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 C4901_08085 4c5402b28c474908f10127d789a9c7c2 364 Gene3D G3DSA:2.30.30.60 203 252 2.5E-11 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily C4901_08085 4c5402b28c474908f10127d789a9c7c2 364 SUPERFAMILY SSF50182 187 251 1.57E-13 T 14-10-2018 IPR010920 LSM domain superfamily C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 Gene3D G3DSA:3.40.50.12780 66 524 5.0E-113 T 14-10-2018 C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 Pfam PF13193 AMP-binding enzyme C-terminal domain 540 621 1.8E-27 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 Pfam PF00501 AMP-binding enzyme 93 532 2.4E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 36 91 3.9E-19 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 SUPERFAMILY SSF56801 39 634 3.92E-181 T 14-10-2018 C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 33 653 1.2E-294 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 268 279 - T 14-10-2018 IPR020845 AMP-binding, conserved site C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 14 656 51.361 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 C4901_04705 947aad2f35e225e79cc49b1ad1fd94b2 658 Gene3D G3DSA:3.30.300.30 527 656 2.0E-29 T 14-10-2018 C4901_02080 6611454887f266df9a402f7053597aec 329 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 2 310 19.872 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C4901_02080 6611454887f266df9a402f7053597aec 329 Gene3D G3DSA:3.100.10.20 2 75 5.1E-5 T 14-10-2018 C4901_02080 6611454887f266df9a402f7053597aec 329 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 4 288 2.0E-49 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C4901_02080 6611454887f266df9a402f7053597aec 329 Pfam PF01867 CRISPR associated protein Cas1 5 287 1.5E-66 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C4901_02080 6611454887f266df9a402f7053597aec 329 Gene3D G3DSA:1.20.120.920 84 320 7.6E-62 T 14-10-2018 C4901_13795 1f09a4446651817605d06270dd846c36 137 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 133 2.1E-28 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C4901_13795 1f09a4446651817605d06270dd846c36 137 TIGRFAM TIGR02801 tolR: protein TolR 12 133 1.5E-38 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 C4901_13795 1f09a4446651817605d06270dd846c36 137 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 3 133 26.852 T 14-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 C4901_13795 1f09a4446651817605d06270dd846c36 137 Gene3D G3DSA:3.30.420.270 62 130 2.3E-13 T 14-10-2018 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 Gene3D G3DSA:3.40.120.10 181 258 5.0E-34 T 14-10-2018 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 SUPERFAMILY SSF53738 18 151 1.49E-38 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 109 118 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 SUPERFAMILY SSF55957 376 462 5.93E-20 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 SUPERFAMILY SSF53738 266 373 4.71E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 179 198 3.0E-24 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 108 122 3.0E-24 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 213 226 3.0E-24 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 3.0E-24 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 20 145 3.6E-34 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 Gene3D G3DSA:3.40.120.10 10 161 5.6E-49 T 14-10-2018 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 400 458 3.0E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 165 262 9.8E-26 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 SUPERFAMILY SSF53738 163 264 3.92E-30 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 Gene3D G3DSA:3.40.120.10 260 377 2.2E-40 T 14-10-2018 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 376 6.3E-24 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 C4901_04005 fb737782bad1f61ae10878da85dec08a 468 Gene3D G3DSA:3.30.310.50 378 466 7.8E-23 T 14-10-2018 C4901_02645 f4eeb96cb0933492429904edec147bc4 276 Pfam PF00085 Thioredoxin 14 110 2.5E-13 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C4901_02645 f4eeb96cb0933492429904edec147bc4 276 Pfam PF14559 Tetratricopeptide repeat 128 189 1.2E-5 T 14-10-2018 C4901_02645 f4eeb96cb0933492429904edec147bc4 276 SUPERFAMILY SSF52833 10 115 1.53E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_02645 f4eeb96cb0933492429904edec147bc4 276 Gene3D G3DSA:3.40.30.10 8 110 5.4E-19 T 14-10-2018 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 Pfam PF00009 Elongation factor Tu GTP binding domain 11 273 7.1E-49 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 Pfam PF16658 Class II release factor RF3, C-terminal domain 383 508 2.3E-40 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 Gene3D G3DSA:3.40.50.300 70 375 5.7E-106 T 14-10-2018 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 SUPERFAMILY SSF54980 389 464 2.91E-17 T 14-10-2018 IPR035647 EF-G domain III/V-like C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 151 1.8E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 Gene3D G3DSA:3.30.70.3280 386 524 4.6E-44 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 PRINTS PR00315 GTP-binding elongation factor signature 13 26 4.6E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 PRINTS PR00315 GTP-binding elongation factor signature 83 93 4.6E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 PRINTS PR00315 GTP-binding elongation factor signature 63 71 4.6E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 PRINTS PR00315 GTP-binding elongation factor signature 135 144 4.6E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 Gene3D G3DSA:3.40.50.300 108 271 5.7E-106 T 14-10-2018 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 SUPERFAMILY SSF50447 257 389 2.04E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 522 50.891 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 SUPERFAMILY SSF52540 7 273 2.21E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 Pfam PF03144 Elongation factor Tu domain 2 311 376 6.1E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 C4901_00725 5c456c2dc2208503dfa1c4620e782102 526 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 523 2.8E-224 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 C4901_08570 3a2328b2c7f2245a55cf363ae11d1344 189 Gene3D G3DSA:3.40.30.10 38 187 6.7E-15 T 14-10-2018 C4901_04045 31dbdacd1cef3ff6631798db92a6dec5 206 Gene3D G3DSA:3.30.40.60 71 169 1.4E-21 T 14-10-2018 C4901_04045 31dbdacd1cef3ff6631798db92a6dec5 206 SMART SM00507 86 139 4.3E-9 T 14-10-2018 IPR003615 HNH nuclease C4901_04045 31dbdacd1cef3ff6631798db92a6dec5 206 Pfam PF14279 HNH endonuclease 99 153 1.4E-16 T 14-10-2018 IPR029471 HNH endonuclease 5 C4901_13000 d8d767122c344cc12e2d3a89ad8d298f 403 Pfam PF07592 Rhodopirellula transposase DDE domain 91 398 2.8E-139 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_14800 5b8f8bb0cb18a8425020e55711e70b23 517 SUPERFAMILY SSF53146 383 492 9.94E-32 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C4901_14800 5b8f8bb0cb18a8425020e55711e70b23 517 Gene3D G3DSA:3.30.420.130 378 495 1.5E-27 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C4901_14800 5b8f8bb0cb18a8425020e55711e70b23 517 TIGRFAM TIGR01290 nifB: nitrogenase cofactor biosynthesis protein NifB 50 488 9.6E-211 T 14-10-2018 IPR005980 Nitrogenase cofactor biosynthesis protein NifB GO:0009108|GO:0009399 C4901_14800 5b8f8bb0cb18a8425020e55711e70b23 517 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 78 89 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_14800 5b8f8bb0cb18a8425020e55711e70b23 517 SUPERFAMILY SSF102114 66 280 1.57E-35 T 14-10-2018 C4901_14800 5b8f8bb0cb18a8425020e55711e70b23 517 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 392 486 3.1E-22 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis C4901_14800 5b8f8bb0cb18a8425020e55711e70b23 517 Pfam PF04055 Radical SAM superfamily 78 254 1.0E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_14800 5b8f8bb0cb18a8425020e55711e70b23 517 Gene3D G3DSA:3.20.20.70 64 370 7.6E-31 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_13890 48a2da5528e9441cd4b8f6f11d51c845 359 Gene3D G3DSA:3.90.1510.10 45 272 7.6E-88 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 C4901_13890 48a2da5528e9441cd4b8f6f11d51c845 359 Gene3D G3DSA:3.40.50.10350 6 343 7.6E-88 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold C4901_13890 48a2da5528e9441cd4b8f6f11d51c845 359 Pfam PF02595 Glycerate kinase family 6 343 1.5E-88 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 C4901_13890 48a2da5528e9441cd4b8f6f11d51c845 359 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 6 329 8.7E-83 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 C4901_13890 48a2da5528e9441cd4b8f6f11d51c845 359 SUPERFAMILY SSF110738 6 330 4.45E-80 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 C4901_13890 48a2da5528e9441cd4b8f6f11d51c845 359 PIRSF PIRSF006078 4 355 2.2E-81 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 Pfam PF08442 ATP-grasp domain 2 196 3.4E-51 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 379 4.8E-124 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 PIRSF PIRSF001554 1 382 2.5E-122 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 Pfam PF00549 CoA-ligase 256 374 4.1E-21 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 Gene3D G3DSA:3.30.470.20 2 228 7.8E-69 T 14-10-2018 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 Gene3D G3DSA:3.40.50.261 234 381 6.3E-46 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 Gene3D G3DSA:3.30.1490.20 21 103 7.8E-69 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 380 35.217 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 251 276 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 SUPERFAMILY SSF56059 3 230 2.36E-55 T 14-10-2018 C4901_08340 b9f7bb85bf8bd262fbe3d4b36feb2cd9 382 SUPERFAMILY SSF52210 238 377 1.31E-43 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 C4901_12870 6046550c3ced947ca747d6f5f0a7bce9 84 SUPERFAMILY SSF143120 4 66 2.09E-12 T 14-10-2018 IPR036165 YefM-like superfamily C4901_12870 6046550c3ced947ca747d6f5f0a7bce9 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 20 50 1.2E-6 T 14-10-2018 C4901_12870 6046550c3ced947ca747d6f5f0a7bce9 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 4 54 1.2E-10 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_12870 6046550c3ced947ca747d6f5f0a7bce9 84 Gene3D G3DSA:3.40.1620.10 18 52 7.5E-7 T 14-10-2018 C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 Gene3D G3DSA:3.20.20.450 618 865 2.6E-51 T 14-10-2018 IPR035919 EAL domain superfamily C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 Pfam PF13185 GAF domain 285 423 8.6E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 Gene3D G3DSA:1.20.120.50 86 220 6.0E-18 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 SMART SM00267 434 608 4.1E-54 T 14-10-2018 IPR000160 GGDEF domain C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 Gene3D G3DSA:3.30.70.270 441 611 4.2E-48 T 14-10-2018 C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 SUPERFAMILY SSF55781 287 431 1.2E-13 T 14-10-2018 C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 SUPERFAMILY SSF47188 84 215 7.72E-19 T 14-10-2018 IPR035938 Hemerythrin-like superfamily C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 Pfam PF00990 Diguanylate cyclase, GGDEF domain 445 602 3.1E-40 T 14-10-2018 IPR000160 GGDEF domain C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 SMART SM00052 617 858 2.0E-30 T 14-10-2018 IPR001633 EAL domain C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 Pfam PF00563 EAL domain 622 853 1.1E-43 T 14-10-2018 IPR001633 EAL domain C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 SUPERFAMILY SSF141868 624 863 9.15E-46 T 14-10-2018 IPR035919 EAL domain superfamily C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 444 604 4.2E-37 T 14-10-2018 IPR000160 GGDEF domain C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 90 215 2.3E-17 T 14-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 Gene3D G3DSA:3.30.450.40 253 433 3.5E-15 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_13040 5fb51abd8ad3e0adaabc6aa510145df5 991 SUPERFAMILY SSF55073 450 607 2.2E-41 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_07415 02a54166481c72d04dc18963932a1781 578 PIRSF PIRSF001294 1 578 5.1E-218 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 C4901_07415 02a54166481c72d04dc18963932a1781 578 Pfam PF03814 Potassium-transporting ATPase A subunit 10 575 2.6E-222 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 C4901_07415 02a54166481c72d04dc18963932a1781 578 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 10 576 2.9E-202 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 C4901_07415 02a54166481c72d04dc18963932a1781 578 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 577 32.863 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 91 193 1.5E-32 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 SUPERFAMILY SSF46609 3 89 1.02E-32 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 Gene3D G3DSA:2.40.500.20 85 206 1.7E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 Gene3D G3DSA:1.10.287.990 21 84 7.8E-26 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 SUPERFAMILY SSF54719 84 197 1.57E-40 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 PIRSF PIRSF000349 1 202 2.7E-75 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 160 167 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 84 5.8E-31 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 PRINTS PR01703 Manganese superoxide dismutase signature 120 128 1.2E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 1.2E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 PRINTS PR01703 Manganese superoxide dismutase signature 67 80 1.2E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 1.2E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_02670 ecad100fef020f678bcde06fa666c61c 216 PRINTS PR01703 Manganese superoxide dismutase signature 158 170 1.2E-20 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 C4901_05330 6386b0fd27608a46a08c65d1e87f5759 432 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 24 363 6.1E-11 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 C4901_05330 6386b0fd27608a46a08c65d1e87f5759 432 Gene3D G3DSA:1.10.4160.10 13 416 1.9E-18 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily C4901_02695 0489a676931e7a8116a6613726976624 348 Pfam PF01565 FAD binding domain 8 135 7.5E-21 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C4901_02695 0489a676931e7a8116a6613726976624 348 SUPERFAMILY SSF56176 8 171 2.94E-27 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C4901_02695 0489a676931e7a8116a6613726976624 348 SUPERFAMILY SSF55103 136 347 6.32E-11 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C4901_02695 0489a676931e7a8116a6613726976624 348 Gene3D G3DSA:3.30.465.40 5 184 3.1E-28 T 14-10-2018 C4901_08925 286be298186585c96122f4693a23bef8 119 Gene3D G3DSA:3.40.30.10 1 110 3.6E-41 T 14-10-2018 C4901_08925 286be298186585c96122f4693a23bef8 119 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 119 1.5E-45 T 14-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 449 460 1.5E-26 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 543 1.5E-26 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 313 327 1.5E-26 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 547 559 1.5E-26 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 1.5E-26 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 471 481 1.5E-26 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 SUPERFAMILY SSF56784 301 567 1.83E-40 T 14-10-2018 IPR036412 HAD-like superfamily C4901_13100 96cddd573db7b90e361f2659d48425ba 689 Pfam PF00702 haloacid dehalogenase-like hydrolase 309 538 1.4E-32 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 Gene3D G3DSA:3.40.50.1000 295 575 9.9E-65 T 14-10-2018 IPR023214 HAD superfamily C4901_13100 96cddd573db7b90e361f2659d48425ba 689 Gene3D G3DSA:2.70.150.20 112 220 4.6E-26 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 82 350 1.4E-31 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 381 608 2.2E-42 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 524 540 4.1E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 404 422 4.1E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 315 321 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 17 688 39.06 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 SUPERFAMILY SSF81653 118 215 7.32E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 Pfam PF00122 E1-E2 ATPase 115 292 3.6E-33 T 14-10-2018 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 19 684 0.0 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 SUPERFAMILY SSF81665 39 307 4.05E-8 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C4901_13100 96cddd573db7b90e361f2659d48425ba 689 Gene3D G3DSA:3.40.1110.10 324 456 9.9E-65 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 3.7E-41 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 SMART SM00878 335 441 9.9E-56 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 SUPERFAMILY SSF51246 330 446 1.46E-39 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 Pfam PF02785 Biotin carboxylase C-terminal domain 335 441 1.7E-36 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 321 6.2E-73 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 SUPERFAMILY SSF52440 1 112 3.45E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 Gene3D G3DSA:3.30.470.130 1 449 2.9E-186 T 14-10-2018 C4901_08800 af06ecd199e376a3a07d9fcd3373fe03 472 SUPERFAMILY SSF56059 82 347 1.33E-66 T 14-10-2018 C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 PIRSF PIRSF002401 1 342 1.4E-129 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 Gene3D G3DSA:3.40.50.300 159 336 3.0E-50 T 14-10-2018 C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 Pfam PF01926 50S ribosome-binding GTPase 161 263 3.9E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 2.2E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 2.2E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 2.2E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 2.2E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 SUPERFAMILY SSF52540 152 341 1.93E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 Pfam PF01018 GTP1/OBG 4 157 1.8E-57 T 14-10-2018 IPR006169 GTP1/OBG domain C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 Hamap MF_01454 GTPase Obg [obg]. 2 334 47.185 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 Gene3D G3DSA:2.70.210.12 1 158 1.5E-58 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 SUPERFAMILY SSF82051 2 157 2.88E-53 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily C4901_05130 c1015ee7520700ea420e668b9e42fba5 353 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 333 1.2E-137 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 C4901_09865 71aa200a6f5d4bd87606f4ba57aed2d5 261 SUPERFAMILY SSF144091 11 162 8.11E-14 T 14-10-2018 C4901_09865 71aa200a6f5d4bd87606f4ba57aed2d5 261 Pfam PF04511 Der1-like family 45 164 5.5E-5 T 14-10-2018 IPR007599 Derlin Reactome: R-HSA-382556|Reactome: R-HSA-5678895 C4901_09865 71aa200a6f5d4bd87606f4ba57aed2d5 261 Gene3D G3DSA:1.20.1540.10 12 174 2.6E-5 T 14-10-2018 IPR035952 Rhomboid-like superfamily C4901_04050 ce76f5c49a7fa59218a92061a954071d 396 Pfam PF01610 Transposase 267 391 3.3E-14 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_04050 ce76f5c49a7fa59218a92061a954071d 396 Pfam PF00487 Fatty acid desaturase 10 212 1.9E-13 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 C4901_13790 b7a0d0848a41193ccbcbdec4fe5d47de 309 Gene3D G3DSA:3.30.1150.10 190 305 2.6E-23 T 14-10-2018 C4901_13790 b7a0d0848a41193ccbcbdec4fe5d47de 309 TIGRFAM TIGR02794 tolA_full: protein TolA 89 300 2.4E-31 T 14-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 C4901_13790 b7a0d0848a41193ccbcbdec4fe5d47de 309 SUPERFAMILY SSF74653 214 302 2.49E-16 T 14-10-2018 C4901_13790 b7a0d0848a41193ccbcbdec4fe5d47de 309 Pfam PF13103 TonB C terminal 217 301 1.9E-15 T 14-10-2018 C4901_13790 b7a0d0848a41193ccbcbdec4fe5d47de 309 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 243 289 4.7E-8 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 Pfam PF10502 Signal peptidase, peptidase S26 193 234 1.1E-4 T 14-10-2018 IPR019533 Peptidase S26 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 Gene3D G3DSA:2.10.109.10 56 237 2.6E-66 T 14-10-2018 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 SUPERFAMILY SSF51306 56 252 5.75E-68 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 43 237 6.5E-50 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 58 74 1.8E-22 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 1.8E-22 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 197 216 1.8E-22 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 ProSitePatterns PS00760 Signal peptidases I lysine active site. 124 136 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 ProSitePatterns PS00501 Signal peptidases I serine active site. 67 74 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 ProSitePatterns PS00761 Signal peptidases I signature 3. 202 215 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 Pfam PF00717 Peptidase S24-like 64 146 4.5E-22 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C4901_07090 9d0a993751743d0eae5c3ef2d432ae66 255 Gene3D G3DSA:2.170.230.10 133 196 2.6E-66 T 14-10-2018 C4901_04710 daffd29507d3f6f61af301f363de3a56 222 Pfam PF09335 SNARE associated Golgi protein 37 162 3.9E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein C4901_03025 7d4941804b962af0a8a311f9a10c662f 245 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_03025 7d4941804b962af0a8a311f9a10c662f 245 Pfam PF00005 ABC transporter 23 163 4.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_03025 7d4941804b962af0a8a311f9a10c662f 245 SMART SM00382 30 211 3.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03025 7d4941804b962af0a8a311f9a10c662f 245 Gene3D G3DSA:3.40.50.300 2 240 7.7E-61 T 14-10-2018 C4901_03025 7d4941804b962af0a8a311f9a10c662f 245 SUPERFAMILY SSF52540 4 227 2.07E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15240 789258d0e08a07eec247ce4019595909 169 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 50 68 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site C4901_15240 789258d0e08a07eec247ce4019595909 169 Pfam PF02082 Transcriptional regulator 5 84 3.0E-25 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C4901_15240 789258d0e08a07eec247ce4019595909 169 Gene3D G3DSA:1.10.10.10 3 158 9.3E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_15240 789258d0e08a07eec247ce4019595909 169 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 6 142 3.1E-31 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type C4901_15240 789258d0e08a07eec247ce4019595909 169 SUPERFAMILY SSF46785 6 147 1.39E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_17015 2380e7c8edbd185e3f00e88cdacab39d 156 Gene3D G3DSA:1.20.5.620 63 122 1.6E-8 T 14-10-2018 C4901_17015 2380e7c8edbd185e3f00e88cdacab39d 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 155 3.7E-39 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 C4901_17015 2380e7c8edbd185e3f00e88cdacab39d 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 11.835 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C4901_17015 2380e7c8edbd185e3f00e88cdacab39d 156 SUPERFAMILY SSF81573 63 121 2.22E-9 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily C4901_17015 2380e7c8edbd185e3f00e88cdacab39d 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 136 2.0E-24 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C4901_09400 4b07b46d252ce974df6744791f7d4962 179 SUPERFAMILY SSF75169 65 179 1.71E-13 T 14-10-2018 IPR027396 DsrEFH-like C4901_09400 4b07b46d252ce974df6744791f7d4962 179 Pfam PF02635 DsrE/DsrF-like family 82 178 2.5E-6 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_09400 4b07b46d252ce974df6744791f7d4962 179 Gene3D G3DSA:3.40.1260.10 63 179 3.3E-21 T 14-10-2018 IPR027396 DsrEFH-like C4901_12815 68eb98faf4602c138f62018e0ad9dd13 206 Gene3D G3DSA:3.20.20.70 3 204 1.1E-65 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_12815 68eb98faf4602c138f62018e0ad9dd13 206 SUPERFAMILY SSF51366 3 202 2.35E-60 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C4901_12815 68eb98faf4602c138f62018e0ad9dd13 206 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 199 1.2E-44 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 C4901_12815 68eb98faf4602c138f62018e0ad9dd13 206 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 3 205 41.915 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 C4901_00455 c96a322568b37b22d7efe14442ea72e2 131 Gene3D G3DSA:1.20.120.330 1 122 7.1E-35 T 14-10-2018 C4901_00455 c96a322568b37b22d7efe14442ea72e2 131 SMART SM00748 4 115 5.3E-25 T 14-10-2018 IPR007842 HEPN domain C4901_00455 c96a322568b37b22d7efe14442ea72e2 131 SUPERFAMILY SSF81593 2 120 1.84E-30 T 14-10-2018 C4901_00455 c96a322568b37b22d7efe14442ea72e2 131 Pfam PF05168 HEPN domain 2 119 5.0E-28 T 14-10-2018 IPR007842 HEPN domain C4901_08080 a428419628de81faf9cf15f408b25829 498 SUPERFAMILY SSF53756 9 473 1.51E-144 T 14-10-2018 C4901_08080 a428419628de81faf9cf15f408b25829 498 Gene3D G3DSA:3.40.50.2000 253 461 3.7E-168 T 14-10-2018 C4901_08080 a428419628de81faf9cf15f408b25829 498 Gene3D G3DSA:3.40.50.2000 34 472 3.7E-168 T 14-10-2018 C4901_08080 a428419628de81faf9cf15f408b25829 498 Pfam PF00982 Glycosyltransferase family 20 10 474 2.4E-142 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 Gene3D G3DSA:1.25.10.110 2 91 5.7E-14 T 14-10-2018 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 Gene3D G3DSA:1.25.10.10 93 251 4.2E-22 T 14-10-2018 IPR011989 Armadillo-like helical C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SMART SM00567 E-Z type HEAT repeats 47 76 0.0015 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SMART SM00567 E-Z type HEAT repeats 16 45 280.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SMART SM00567 E-Z type HEAT repeats 78 106 660.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SMART SM00567 E-Z type HEAT repeats 266 295 1.8E-5 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SMART SM00567 E-Z type HEAT repeats 172 201 95.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SMART SM00567 E-Z type HEAT repeats 203 232 0.017 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SMART SM00567 E-Z type HEAT repeats 140 169 270.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SUPERFAMILY SSF48371 19 242 1.2E-38 T 14-10-2018 IPR016024 Armadillo-type fold C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 Pfam PF13646 HEAT repeats 10 89 1.6E-12 T 14-10-2018 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 Pfam PF13646 HEAT repeats 224 308 1.9E-13 T 14-10-2018 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 Gene3D G3DSA:1.25.10.110 252 313 3.1E-12 T 14-10-2018 C4901_00970 ed4d8c9c57281c45d23070e3d2e2a1df 313 SUPERFAMILY SSF48371 237 310 3.16E-12 T 14-10-2018 IPR016024 Armadillo-type fold C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 Gene3D G3DSA:2.30.30.940 756 830 3.4E-14 T 14-10-2018 C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 Gene3D G3DSA:3.40.50.300 385 599 1.7E-33 T 14-10-2018 C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 Pfam PF08751 TrwC relaxase 14 296 1.2E-62 T 14-10-2018 IPR014862 TrwC relaxase C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 SUPERFAMILY SSF55464 2 301 2.43E-62 T 14-10-2018 C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 Gene3D G3DSA:3.40.50.300 831 882 3.4E-14 T 14-10-2018 C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 31 300 2.9E-58 T 14-10-2018 IPR014059 Conjugative relaxase, N-terminal C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 SUPERFAMILY SSF52540 422 573 2.21E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 SUPERFAMILY SSF52540 535 883 4.36E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 SMART SM00382 441 786 6.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_11540 2cddc730e8f93564cec5e4cfc18b6678 953 Pfam PF13604 AAA domain 426 610 1.9E-48 T 14-10-2018 C4901_07950 3f69d1ec0fccd4b19702aa9981600168 1172 PIRSF PIRSF005719 1 1164 5.6E-243 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein C4901_07950 3f69d1ec0fccd4b19702aa9981600168 1172 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1160 21.834 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 C4901_07950 3f69d1ec0fccd4b19702aa9981600168 1172 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1158 5.4E-302 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 C4901_07950 3f69d1ec0fccd4b19702aa9981600168 1172 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1151 7.5E-65 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C4901_07950 3f69d1ec0fccd4b19702aa9981600168 1172 Gene3D G3DSA:3.40.50.300 1 241 1.0E-51 T 14-10-2018 C4901_07950 3f69d1ec0fccd4b19702aa9981600168 1172 Gene3D G3DSA:3.40.50.300 871 1167 1.5E-47 T 14-10-2018 C4901_07950 3f69d1ec0fccd4b19702aa9981600168 1172 SUPERFAMILY SSF52540 1 1161 3.39E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12765 467a0d8844fb460ebaff3b67a334e5d6 256 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 6 229 1.5E-71 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 C4901_12765 467a0d8844fb460ebaff3b67a334e5d6 256 Pfam PF00149 Calcineurin-like phosphoesterase 5 201 2.4E-5 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C4901_12765 467a0d8844fb460ebaff3b67a334e5d6 256 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 243 90.024 T 14-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 C4901_12765 467a0d8844fb460ebaff3b67a334e5d6 256 SUPERFAMILY SSF56300 5 224 3.45E-23 T 14-10-2018 C4901_05035 eefaf4b0aab4e67389af701e8a64b3cb 136 Pfam PF01850 PIN domain 4 124 2.0E-13 T 14-10-2018 IPR002716 PIN domain C4901_05035 eefaf4b0aab4e67389af701e8a64b3cb 136 Gene3D G3DSA:3.40.50.1010 3 133 1.4E-26 T 14-10-2018 C4901_05035 eefaf4b0aab4e67389af701e8a64b3cb 136 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 130 12.271 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_05035 eefaf4b0aab4e67389af701e8a64b3cb 136 SUPERFAMILY SSF88723 4 125 2.8E-19 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_05035 eefaf4b0aab4e67389af701e8a64b3cb 136 SMART SM00670 1 122 7.9E-4 T 14-10-2018 IPR002716 PIN domain C4901_14040 a613063176f93bea854def16573b65ad 171 SUPERFAMILY SSF54768 11 80 2.3E-22 T 14-10-2018 C4901_14040 a613063176f93bea854def16573b65ad 171 Pfam PF03719 Ribosomal protein S5, C-terminal domain 91 161 9.7E-28 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 C4901_14040 a613063176f93bea854def16573b65ad 171 Gene3D G3DSA:3.30.230.10 78 171 7.8E-35 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_14040 a613063176f93bea854def16573b65ad 171 ProSitePatterns PS00585 Ribosomal protein S5 signature. 32 64 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site C4901_14040 a613063176f93bea854def16573b65ad 171 SUPERFAMILY SSF54211 83 163 3.54E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_14040 a613063176f93bea854def16573b65ad 171 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 167 33.588 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 C4901_14040 a613063176f93bea854def16573b65ad 171 Pfam PF00333 Ribosomal protein S5, N-terminal domain 15 78 3.3E-27 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 C4901_14040 a613063176f93bea854def16573b65ad 171 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 13 167 2.5E-64 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 C4901_14040 a613063176f93bea854def16573b65ad 171 Gene3D G3DSA:3.30.160.20 7 76 2.0E-29 T 14-10-2018 C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 Gene3D G3DSA:3.50.50.60 527 602 9.6E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 514 532 1.2E-7 T 14-10-2018 C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 568 586 1.2E-7 T 14-10-2018 C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 401 420 1.2E-7 T 14-10-2018 C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 564 588 4.5E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 400 422 4.5E-5 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 Gene3D G3DSA:3.50.50.60 647 743 8.2E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 SUPERFAMILY SSF63380 854 953 7.33E-10 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 SUPERFAMILY SSF51971 398 742 1.49E-16 T 14-10-2018 C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 Gene3D G3DSA:2.40.30.10 852 953 2.9E-9 T 14-10-2018 C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 Gene3D G3DSA:3.50.50.60 402 526 9.6E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_00980 bd87de71be07d640775f173d4d95eac3 1177 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 400 606 7.6E-9 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 248 407 2.4E-40 T 14-10-2018 IPR000160 GGDEF domain C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 SMART SM00052 422 667 7.3E-106 T 14-10-2018 IPR001633 EAL domain C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 SUPERFAMILY SSF141868 429 674 1.06E-85 T 14-10-2018 IPR035919 EAL domain superfamily C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 SMART SM00304 162 214 7.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 Pfam PF00672 HAMP domain 164 210 6.1E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 Gene3D G3DSA:1.20.1480.50 126 220 3.6E-8 T 14-10-2018 C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 Pfam PF00563 EAL domain 429 662 1.1E-71 T 14-10-2018 IPR001633 EAL domain C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 SUPERFAMILY SSF55073 257 411 4.55E-47 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 SMART SM00267 241 413 5.1E-64 T 14-10-2018 IPR000160 GGDEF domain C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 Gene3D G3DSA:3.20.20.450 423 676 1.1E-95 T 14-10-2018 IPR035919 EAL domain superfamily C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 Pfam PF00990 Diguanylate cyclase, GGDEF domain 252 407 5.7E-47 T 14-10-2018 IPR000160 GGDEF domain C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 SUPERFAMILY SSF158472 164 211 8.24E-6 T 14-10-2018 C4901_01700 9e5fda60808093a3d6092aa603dfc33f 676 Gene3D G3DSA:3.30.70.270 246 413 7.2E-56 T 14-10-2018 C4901_02685 bf7abbf549cfbfe3a7c8c9cefb5f76b4 150 SUPERFAMILY SSF82784 6 130 2.09E-21 T 14-10-2018 IPR036102 OsmC/Ohr superfamily C4901_02685 bf7abbf549cfbfe3a7c8c9cefb5f76b4 150 Pfam PF02566 OsmC-like protein 36 129 9.4E-12 T 14-10-2018 IPR003718 OsmC/Ohr family C4901_02685 bf7abbf549cfbfe3a7c8c9cefb5f76b4 150 Gene3D G3DSA:3.30.300.20 9 132 3.0E-18 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_00205 2095567c59159533774cdd8ac9600fe2 507 SUPERFAMILY SSF53067 36 281 9.26E-53 T 14-10-2018 C4901_00205 2095567c59159533774cdd8ac9600fe2 507 Gene3D G3DSA:3.30.420.40 36 280 7.9E-61 T 14-10-2018 C4901_00205 2095567c59159533774cdd8ac9600fe2 507 SUPERFAMILY SSF53067 284 500 6.08E-30 T 14-10-2018 C4901_00205 2095567c59159533774cdd8ac9600fe2 507 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 289 468 5.6E-23 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 C4901_00205 2095567c59159533774cdd8ac9600fe2 507 PIRSF PIRSF000538 34 496 1.7E-80 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 C4901_00205 2095567c59159533774cdd8ac9600fe2 507 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 36 278 2.5E-37 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 C4901_00205 2095567c59159533774cdd8ac9600fe2 507 Gene3D G3DSA:3.30.420.40 284 506 1.1E-34 T 14-10-2018 C4901_10270 ead1c7e063d52cb35d64c34c8620f4d5 173 Gene3D G3DSA:3.30.530.20 14 163 2.9E-23 T 14-10-2018 IPR023393 START-like domain superfamily C4901_10270 ead1c7e063d52cb35d64c34c8620f4d5 173 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 26 162 3.8E-11 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase C4901_10270 ead1c7e063d52cb35d64c34c8620f4d5 173 SUPERFAMILY SSF55961 23 162 9.63E-22 T 14-10-2018 C4901_07785 d6c80dbf5ca4af508795a788a42f3799 123 SUPERFAMILY SSF51182 10 120 1.8E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_07785 d6c80dbf5ca4af508795a788a42f3799 123 Gene3D G3DSA:2.60.120.10 13 122 2.8E-21 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_07785 d6c80dbf5ca4af508795a788a42f3799 123 Pfam PF07883 Cupin domain 44 109 3.0E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 Gene3D G3DSA:3.40.1450.10 79 313 1.2E-207 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 Gene3D G3DSA:3.40.720.10 7 512 1.2E-207 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 PIRSF PIRSF001492 1 515 7.9E-193 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 512 5.1E-210 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 Pfam PF01676 Metalloenzyme superfamily 6 500 7.9E-71 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 SUPERFAMILY SSF64158 79 310 9.55E-78 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 SUPERFAMILY SSF53649 5 512 2.29E-68 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 84 300 1.5E-75 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_00870 db81be8a658e6e3b2c350b1539e5d64f 515 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 513 48.268 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_13095 a8575db844ab8807f39ee3e75c08d04f 195 Pfam PF02669 K+-transporting ATPase, c chain 4 182 1.7E-61 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 C4901_13095 a8575db844ab8807f39ee3e75c08d04f 195 PIRSF PIRSF001296 1 188 2.0E-60 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 C4901_13095 a8575db844ab8807f39ee3e75c08d04f 195 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 183 8.3E-51 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 C4901_13095 a8575db844ab8807f39ee3e75c08d04f 195 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 184 29.341 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 C4901_12015 f08d2ff83306731ea1d39b9211335734 609 Gene3D G3DSA:1.20.1560.10 14 346 1.6E-16 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_12015 f08d2ff83306731ea1d39b9211335734 609 SUPERFAMILY SSF52540 359 598 4.15E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12015 f08d2ff83306731ea1d39b9211335734 609 ProSitePatterns PS00211 ABC transporters family signature. 506 520 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_12015 f08d2ff83306731ea1d39b9211335734 609 SUPERFAMILY SSF90123 16 331 6.8E-26 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 C4901_12015 f08d2ff83306731ea1d39b9211335734 609 Gene3D G3DSA:3.40.50.300 351 598 7.7E-75 T 14-10-2018 C4901_12015 f08d2ff83306731ea1d39b9211335734 609 Pfam PF00005 ABC transporter 384 534 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_12015 f08d2ff83306731ea1d39b9211335734 609 SMART SM00382 393 580 2.8E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_12015 f08d2ff83306731ea1d39b9211335734 609 Pfam PF00664 ABC transporter transmembrane region 88 293 4.8E-10 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 C4901_03355 09a24634c2625052dafd8d3b9750779f 149 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 130 2.4E-48 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 C4901_03355 09a24634c2625052dafd8d3b9750779f 149 Gene3D G3DSA:2.40.330.20 1 144 8.5E-44 T 14-10-2018 IPR038619 MraZ superfamily C4901_03355 09a24634c2625052dafd8d3b9750779f 149 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 149 56.009 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 C4901_03355 09a24634c2625052dafd8d3b9750779f 149 SUPERFAMILY SSF89447 1 134 1.64E-46 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_03355 09a24634c2625052dafd8d3b9750779f 149 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 125 9.0E-47 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 C4901_03355 09a24634c2625052dafd8d3b9750779f 149 Pfam PF02381 MraZ protein, putative antitoxin-like 77 130 4.4E-18 T 14-10-2018 IPR020603 MraZ domain C4901_03355 09a24634c2625052dafd8d3b9750779f 149 Pfam PF02381 MraZ protein, putative antitoxin-like 1 74 8.6E-19 T 14-10-2018 IPR020603 MraZ domain C4901_13325 5d6d6f73e8a0632eb85c392f244e839d 309 Pfam PF02625 XdhC and CoxI family 6 66 1.2E-7 T 14-10-2018 IPR003777 XdhC- CoxI C4901_13325 5d6d6f73e8a0632eb85c392f244e839d 309 Gene3D G3DSA:3.40.50.720 160 306 5.6E-38 T 14-10-2018 C4901_13325 5d6d6f73e8a0632eb85c392f244e839d 309 Pfam PF13478 XdhC Rossmann domain 161 300 1.0E-36 T 14-10-2018 IPR027051 XdhC Rossmann domain C4901_14065 425a3a072e052f04602ea53bd1d11789 180 SUPERFAMILY SSF55282 4 178 8.24E-78 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14065 425a3a072e052f04602ea53bd1d11789 180 Pfam PF00673 ribosomal L5P family C-terminus 85 177 2.4E-41 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14065 425a3a072e052f04602ea53bd1d11789 180 Pfam PF00281 Ribosomal protein L5 25 81 1.6E-26 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14065 425a3a072e052f04602ea53bd1d11789 180 PIRSF PIRSF002161 1 179 6.3E-65 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14065 425a3a072e052f04602ea53bd1d11789 180 Gene3D G3DSA:3.30.1440.10 1 179 2.4E-77 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14065 425a3a072e052f04602ea53bd1d11789 180 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 2 180 42.699 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_04645 d99605115320ca58d4f603b96b94ebd1 246 SUPERFAMILY SSF56219 2 233 1.18E-28 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C4901_04645 d99605115320ca58d4f603b96b94ebd1 246 Gene3D G3DSA:3.60.10.10 1 237 2.1E-32 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C4901_04645 d99605115320ca58d4f603b96b94ebd1 246 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 228 5.8E-17 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C4901_10080 ba401697699281617f4b41adceabf9fb 102 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 15 34 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site C4901_10080 ba401697699281617f4b41adceabf9fb 102 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 59 3.0E-18 T 14-10-2018 C4901_10080 ba401697699281617f4b41adceabf9fb 102 SUPERFAMILY SSF143414 1 84 6.67E-25 T 14-10-2018 IPR037233 CcmK-like superfamily C4901_10080 ba401697699281617f4b41adceabf9fb 102 Gene3D G3DSA:3.30.70.1710 1 95 6.6E-33 T 14-10-2018 C4901_10080 ba401697699281617f4b41adceabf9fb 102 Pfam PF00936 BMC domain 1 73 2.7E-22 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_10080 ba401697699281617f4b41adceabf9fb 102 SMART SM00877 1 74 1.3E-23 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_05880 a98abc831fd6ab500db7e823c23487ff 109 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 8 106 2.4E-26 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 C4901_05880 a98abc831fd6ab500db7e823c23487ff 109 SUPERFAMILY SSF50022 7 108 5.76E-34 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C4901_05880 a98abc831fd6ab500db7e823c23487ff 109 Gene3D G3DSA:2.102.10.10 8 109 8.0E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C4901_05880 a98abc831fd6ab500db7e823c23487ff 109 Pfam PF13806 Rieske-like [2Fe-2S] domain 8 106 1.0E-16 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 C4901_10325 9a56560e4934ac521d94cef637d0f56d 124 PIRSF PIRSF000178 1 123 6.7E-15 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10325 9a56560e4934ac521d94cef637d0f56d 124 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 1 118 4.0E-21 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10325 9a56560e4934ac521d94cef637d0f56d 124 Gene3D G3DSA:1.20.1300.10 1 123 8.2E-26 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10325 9a56560e4934ac521d94cef637d0f56d 124 SUPERFAMILY SSF81343 1 120 1.79E-22 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_10325 9a56560e4934ac521d94cef637d0f56d 124 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 4 120 8.1E-25 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_08065 49f252586c4121c9918b091702090158 442 SMART SM00052 169 415 7.2E-48 T 14-10-2018 IPR001633 EAL domain C4901_08065 49f252586c4121c9918b091702090158 442 Gene3D G3DSA:3.30.70.270 6 168 6.0E-40 T 14-10-2018 C4901_08065 49f252586c4121c9918b091702090158 442 SUPERFAMILY SSF141868 177 412 4.32E-59 T 14-10-2018 IPR035919 EAL domain superfamily C4901_08065 49f252586c4121c9918b091702090158 442 SMART SM00267 3 163 1.4E-29 T 14-10-2018 IPR000160 GGDEF domain C4901_08065 49f252586c4121c9918b091702090158 442 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 9 163 8.7E-31 T 14-10-2018 IPR000160 GGDEF domain C4901_08065 49f252586c4121c9918b091702090158 442 Gene3D G3DSA:3.20.20.450 175 432 6.5E-65 T 14-10-2018 IPR035919 EAL domain superfamily C4901_08065 49f252586c4121c9918b091702090158 442 Pfam PF00563 EAL domain 177 408 3.6E-55 T 14-10-2018 IPR001633 EAL domain C4901_08065 49f252586c4121c9918b091702090158 442 Pfam PF00990 Diguanylate cyclase, GGDEF domain 9 159 2.3E-30 T 14-10-2018 IPR000160 GGDEF domain C4901_08065 49f252586c4121c9918b091702090158 442 SUPERFAMILY SSF55073 10 162 6.04E-37 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_13885 dfb910499e8be97318c302b9dc73bb24 389 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 200 214 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_13885 dfb910499e8be97318c302b9dc73bb24 389 Pfam PF00437 Type II/IV secretion system protein 120 276 4.8E-39 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_13885 dfb910499e8be97318c302b9dc73bb24 389 Gene3D G3DSA:3.30.450.90 2 107 4.2E-31 T 14-10-2018 C4901_13885 dfb910499e8be97318c302b9dc73bb24 389 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 10 351 8.4E-142 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C4901_13885 dfb910499e8be97318c302b9dc73bb24 389 SUPERFAMILY SSF52540 10 344 1.71E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13885 dfb910499e8be97318c302b9dc73bb24 389 Gene3D G3DSA:3.40.50.300 108 361 4.7E-89 T 14-10-2018 C4901_12620 0e193ca50116dacd45b4d216355c903e 234 Pfam PF04143 Sulphur transport 24 189 1.5E-21 T 14-10-2018 IPR007272 Sulphur transport domain C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 SMART SM00863 637 680 5.7E-22 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Gene3D G3DSA:3.30.54.20 608 661 1.0E-50 T 14-10-2018 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 SUPERFAMILY SSF101353 245 435 6.54E-57 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 837 2.7E-298 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Gene3D G3DSA:3.10.310.40 749 856 7.0E-26 T 14-10-2018 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Pfam PF02272 DHHA1 domain 719 854 8.0E-20 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 637 680 1.9E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 SUPERFAMILY SSF55681 2 244 1.64E-107 T 14-10-2018 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 SUPERFAMILY SSF55186 537 691 2.09E-49 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Gene3D G3DSA:3.30.980.10 547 681 1.0E-50 T 14-10-2018 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Gene3D G3DSA:2.40.30.130 471 536 1.8E-8 T 14-10-2018 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Gene3D G3DSA:3.30.930.10 1 241 1.7E-112 T 14-10-2018 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Pfam PF01411 tRNA synthetases class II (A) 5 538 1.3E-211 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 SUPERFAMILY SSF50447 441 536 1.94E-16 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 PRINTS PR00980 Alanyl-tRNA synthetase signature 295 308 2.4E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 PRINTS PR00980 Alanyl-tRNA synthetase signature 225 238 2.4E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 PRINTS PR00980 Alanyl-tRNA synthetase signature 198 209 2.4E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 PRINTS PR00980 Alanyl-tRNA synthetase signature 74 85 2.4E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 PRINTS PR00980 Alanyl-tRNA synthetase signature 271 287 2.4E-31 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 C4901_11285 387bcf26e8aa641d9720c80fb69a07bc 859 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 858 185.93 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 C4901_15890 f4f409d9adde83cb6a7948a460ce6463 130 Pfam PF00581 Rhodanese-like domain 21 121 7.2E-20 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_15890 f4f409d9adde83cb6a7948a460ce6463 130 Gene3D G3DSA:3.40.250.10 2 128 2.9E-36 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_15890 f4f409d9adde83cb6a7948a460ce6463 130 ProSitePatterns PS00380 Rhodanese signature 1. 45 56 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 C4901_15890 f4f409d9adde83cb6a7948a460ce6463 130 SUPERFAMILY SSF52821 6 127 2.1E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_15890 f4f409d9adde83cb6a7948a460ce6463 130 SMART SM00450 20 125 2.7E-25 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_07015 521480ea5b2881e557cdd86be42cf636 183 Gene3D G3DSA:2.40.160.20 46 183 3.7E-14 T 14-10-2018 C4901_07015 521480ea5b2881e557cdd86be42cf636 183 SUPERFAMILY SSF56925 48 183 1.75E-11 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C4901_07015 521480ea5b2881e557cdd86be42cf636 183 Pfam PF13505 Outer membrane protein beta-barrel domain 32 164 1.2E-6 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel C4901_01425 d14af7e3eaac3ca1ba68f57028f8f265 359 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 313 337 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_01425 d14af7e3eaac3ca1ba68f57028f8f265 359 Pfam PF01098 Cell cycle protein 16 356 5.1E-102 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_01425 d14af7e3eaac3ca1ba68f57028f8f265 359 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 11 356 2.5E-121 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_01425 d14af7e3eaac3ca1ba68f57028f8f265 359 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 6 358 25.383 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 C4901_01320 a2424f058cea81742aaace741ad51555 155 SUPERFAMILY SSF53335 11 124 1.31E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_01320 a2424f058cea81742aaace741ad51555 155 Gene3D G3DSA:3.40.50.150 1 113 7.4E-13 T 14-10-2018 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 Pfam PF01872 RibD C-terminal domain 151 330 1.0E-47 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 11 354 1.2E-107 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 150 356 2.5E-51 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 Gene3D G3DSA:3.40.140.10 3 144 8.2E-44 T 14-10-2018 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 103 1.2E-19 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain C4901_11345 34d67def8d8dc0bef7918d031adada38 360 Gene3D G3DSA:3.40.430.10 145 359 5.3E-62 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 92 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 SUPERFAMILY SSF53927 8 145 1.88E-45 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 PIRSF PIRSF006769 3 360 2.8E-119 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 C4901_11345 34d67def8d8dc0bef7918d031adada38 360 SUPERFAMILY SSF53597 150 355 4.74E-54 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C4901_01815 c34505692650d078d5d2be55bc9f3038 283 Gene3D G3DSA:3.40.50.150 3 211 3.0E-30 T 14-10-2018 C4901_01815 c34505692650d078d5d2be55bc9f3038 283 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 260 8.0E-63 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 C4901_01815 c34505692650d078d5d2be55bc9f3038 283 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 261 30.116 T 14-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 C4901_01815 c34505692650d078d5d2be55bc9f3038 283 SUPERFAMILY SSF53335 9 249 8.97E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_01815 c34505692650d078d5d2be55bc9f3038 283 Pfam PF08241 Methyltransferase domain 49 143 3.2E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 SUPERFAMILY SSF48592 11 520 1.75E-75 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 Gene3D G3DSA:3.30.260.10 136 410 3.9E-238 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 SUPERFAMILY SSF54849 137 204 1.88E-24 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 Hamap MF_00600 60 kDa chaperonin [groL]. 2 544 41.997 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 SUPERFAMILY SSF52029 184 376 4.34E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 Gene3D G3DSA:1.10.560.10 8 520 3.9E-238 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 Gene3D G3DSA:3.50.7.10 192 372 3.9E-238 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 522 3.9E-99 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 PRINTS PR00298 60kDa chaperonin signature 398 419 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 PRINTS PR00298 60kDa chaperonin signature 83 110 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 PRINTS PR00298 60kDa chaperonin signature 268 291 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 PRINTS PR00298 60kDa chaperonin signature 27 53 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 PRINTS PR00298 60kDa chaperonin signature 350 375 1.6E-74 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C4901_00575 be0ca1a965bdd5cfc383644a8d723bc1 551 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 8.3E-258 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 C4901_06800 4bd04fde3b9421b6a5d5c04fe3ca894b 496 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 143 154 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_06800 4bd04fde3b9421b6a5d5c04fe3ca894b 496 Pfam PF13183 4Fe-4S dicluster domain 71 157 8.2E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_06800 4bd04fde3b9421b6a5d5c04fe3ca894b 496 SUPERFAMILY SSF46548 62 170 2.27E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_01985 73184e328d4c0aa418f810989342acfe 396 Gene3D G3DSA:3.40.1350.10 264 389 4.7E-55 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 C4901_01985 73184e328d4c0aa418f810989342acfe 396 Gene3D G3DSA:3.40.50.10770 16 155 5.3E-22 T 14-10-2018 C4901_01985 73184e328d4c0aa418f810989342acfe 396 Pfam PF09002 Domain of unknown function (DUF1887) 19 390 1.8E-69 T 14-10-2018 IPR015093 Protein of unknown function DUF1887 C4901_01985 73184e328d4c0aa418f810989342acfe 396 SUPERFAMILY SSF52980 17 390 6.79E-60 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C4901_01985 73184e328d4c0aa418f810989342acfe 396 Gene3D G3DSA:1.10.10.680 182 263 4.7E-55 T 14-10-2018 C4901_09580 ff771ea2e796467e53d182f25e2ecb68 415 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 415 3.9E-151 T 14-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 C4901_09580 ff771ea2e796467e53d182f25e2ecb68 415 Pfam PF02687 FtsX-like permease family 302 408 6.4E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 C4901_09580 ff771ea2e796467e53d182f25e2ecb68 415 Pfam PF12704 MacB-like periplasmic core domain 27 242 6.4E-18 T 14-10-2018 IPR025857 MacB-like periplasmic core domain C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 SUPERFAMILY SSF46785 4 70 2.0E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 3.4E-11 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 3.4E-11 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 3.4E-11 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 Gene3D G3DSA:2.10.109.10 80 199 8.7E-40 T 14-10-2018 C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 SUPERFAMILY SSF51306 75 196 8.72E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 TIGRFAM TIGR00498 lexA: repressor LexA 1 197 7.7E-67 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 Pfam PF00717 Peptidase S24-like 114 179 5.8E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 Pfam PF01726 LexA DNA binding domain 1 65 4.6E-24 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 Hamap MF_00015 LexA repressor [lexA]. 3 198 29.991 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 C4901_12665 3e06f245d9fef7dabb2151e147f8fe22 203 Gene3D G3DSA:1.10.10.10 1 69 2.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07290 4c43745c98f36ab091522564cabc84a8 529 Gene3D G3DSA:3.40.50.300 103 500 1.0E-75 T 14-10-2018 C4901_07290 4c43745c98f36ab091522564cabc84a8 529 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 119 501 1.0E-76 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain C4901_07290 4c43745c98f36ab091522564cabc84a8 529 SUPERFAMILY SSF52540 118 501 6.08E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07290 4c43745c98f36ab091522564cabc84a8 529 Gene3D G3DSA:1.10.8.80 196 297 1.0E-75 T 14-10-2018 C4901_03330 3be6e4455f97e61125d4d5af390561d1 402 Gene3D G3DSA:1.20.1250.20 265 402 6.0E-16 T 14-10-2018 C4901_03330 3be6e4455f97e61125d4d5af390561d1 402 Gene3D G3DSA:1.20.1250.20 15 264 3.6E-29 T 14-10-2018 C4901_03330 3be6e4455f97e61125d4d5af390561d1 402 SUPERFAMILY SSF103473 13 399 7.32E-55 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_03330 3be6e4455f97e61125d4d5af390561d1 402 Pfam PF07690 Major Facilitator Superfamily 24 205 1.1E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_03330 3be6e4455f97e61125d4d5af390561d1 402 Pfam PF07690 Major Facilitator Superfamily 231 399 5.9E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_08380 82ac56336aff5efec74e7b10cda85605 279 Gene3D G3DSA:3.90.1170.20 10 275 2.0E-107 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 C4901_08380 82ac56336aff5efec74e7b10cda85605 279 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 112 275 2.4E-55 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 C4901_08380 82ac56336aff5efec74e7b10cda85605 279 PIRSF PIRSF006250 6 279 1.1E-93 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 C4901_08380 82ac56336aff5efec74e7b10cda85605 279 SUPERFAMILY SSF51690 112 276 3.3E-57 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 C4901_08380 82ac56336aff5efec74e7b10cda85605 279 Gene3D G3DSA:3.20.20.70 120 266 2.0E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_08380 82ac56336aff5efec74e7b10cda85605 279 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 14 276 1.9E-93 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 C4901_08380 82ac56336aff5efec74e7b10cda85605 279 SUPERFAMILY SSF54675 6 110 6.28E-31 T 14-10-2018 C4901_08380 82ac56336aff5efec74e7b10cda85605 279 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 22 109 5.3E-25 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 271 302 4.8E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 397 431 7.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 320 353 7.8E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 Gene3D G3DSA:2.160.10.10 230 458 5.0E-65 T 14-10-2018 C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 9 457 1.1E-177 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 SUPERFAMILY SSF51161 257 438 5.89E-50 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 Gene3D G3DSA:3.90.550.10 6 229 1.6E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 SUPERFAMILY SSF53448 9 254 3.83E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 Pfam PF12804 MobA-like NTP transferase domain 11 171 4.2E-23 T 14-10-2018 IPR025877 MobA-like NTP transferase C4901_16980 1a6d20a9357c2b21f9fbe5edc1c6b602 463 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 7 454 39.789 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 SUPERFAMILY SSF53850 97 279 1.3E-59 T 14-10-2018 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 SMART SM00830 16 96 8.9E-26 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 Pfam PF01817 Chorismate mutase type II 16 94 1.7E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 Gene3D G3DSA:3.30.70.260 275 364 1.2E-28 T 14-10-2018 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 Gene3D G3DSA:1.20.59.10 12 96 1.4E-27 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 Gene3D G3DSA:3.40.190.10 178 261 5.6E-58 T 14-10-2018 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 TIGRFAM TIGR01807 CM_P2: chorismate mutase 12 86 1.3E-28 T 14-10-2018 IPR010957 Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 PIRSF PIRSF001500 6 364 6.4E-126 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 Gene3D G3DSA:3.40.190.10 100 270 5.6E-58 T 14-10-2018 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 SUPERFAMILY SSF55021 267 362 7.75E-27 T 14-10-2018 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 Pfam PF00800 Prephenate dehydratase 98 273 2.8E-60 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 SUPERFAMILY SSF48600 10 94 2.75E-20 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 C4901_12080 ce7b53bc6b49ce1f60d08f6c99403711 364 Pfam PF01842 ACT domain 284 348 5.2E-11 T 14-10-2018 IPR002912 ACT domain C4901_12695 3a0d5f8fb3a732213abbcce3d2ce84c3 516 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 3.6E-6 T 14-10-2018 C4901_12695 3a0d5f8fb3a732213abbcce3d2ce84c3 516 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 3.6E-6 T 14-10-2018 C4901_12695 3a0d5f8fb3a732213abbcce3d2ce84c3 516 PRINTS PR01036 Tetracycline resistance protein TetB signature 163 187 3.6E-6 T 14-10-2018 C4901_12695 3a0d5f8fb3a732213abbcce3d2ce84c3 516 Gene3D G3DSA:1.20.1250.20 277 481 1.1E-21 T 14-10-2018 C4901_12695 3a0d5f8fb3a732213abbcce3d2ce84c3 516 Pfam PF07690 Major Facilitator Superfamily 19 420 3.2E-54 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_12695 3a0d5f8fb3a732213abbcce3d2ce84c3 516 SUPERFAMILY SSF103473 8 508 7.32E-68 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_12695 3a0d5f8fb3a732213abbcce3d2ce84c3 516 Gene3D G3DSA:1.20.1720.10 14 227 2.0E-47 T 14-10-2018 C4901_12695 3a0d5f8fb3a732213abbcce3d2ce84c3 516 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 503 1.6E-128 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 C4901_15210 00510b193a4cd65114aca426418ba90b 116 Gene3D G3DSA:1.10.10.10 28 115 4.8E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_15210 00510b193a4cd65114aca426418ba90b 116 SUPERFAMILY SSF46785 30 107 6.92E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_13530 c779f9e8427ab7af12f6d0f9f994451c 137 Pfam PF03050 Transposase IS66 family 3 76 6.6E-17 T 14-10-2018 IPR004291 Transposase, IS66 C4901_12160 c779f9e8427ab7af12f6d0f9f994451c 137 Pfam PF03050 Transposase IS66 family 3 76 6.6E-17 T 14-10-2018 IPR004291 Transposase, IS66 C4901_16385 339be23e42fb030e092ea824704bf521 525 Pfam PF01590 GAF domain 37 172 1.0E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_16385 339be23e42fb030e092ea824704bf521 525 Gene3D G3DSA:1.10.8.60 380 457 3.9E-23 T 14-10-2018 C4901_16385 339be23e42fb030e092ea824704bf521 525 Gene3D G3DSA:3.30.450.40 13 183 5.7E-31 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_16385 339be23e42fb030e092ea824704bf521 525 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 421 430 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_16385 339be23e42fb030e092ea824704bf521 525 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 499 519 5.5E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_16385 339be23e42fb030e092ea824704bf521 525 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 482 499 5.5E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_16385 339be23e42fb030e092ea824704bf521 525 Pfam PF02954 Bacterial regulatory protein, Fis family 481 516 6.2E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_16385 339be23e42fb030e092ea824704bf521 525 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 233 246 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C4901_16385 339be23e42fb030e092ea824704bf521 525 Gene3D G3DSA:3.40.50.300 199 379 2.9E-64 T 14-10-2018 C4901_16385 339be23e42fb030e092ea824704bf521 525 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 295 310 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_16385 339be23e42fb030e092ea824704bf521 525 SMART SM00382 229 372 1.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_16385 339be23e42fb030e092ea824704bf521 525 SMART SM00065 33 183 3.4E-14 T 14-10-2018 IPR003018 GAF domain GO:0005515 C4901_16385 339be23e42fb030e092ea824704bf521 525 Gene3D G3DSA:1.10.10.60 470 520 3.8E-11 T 14-10-2018 C4901_16385 339be23e42fb030e092ea824704bf521 525 SUPERFAMILY SSF55781 15 173 1.0E-21 T 14-10-2018 C4901_16385 339be23e42fb030e092ea824704bf521 525 SUPERFAMILY SSF52540 208 452 2.85E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16385 339be23e42fb030e092ea824704bf521 525 Pfam PF00158 Sigma-54 interaction domain 209 375 1.3E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_16385 339be23e42fb030e092ea824704bf521 525 SUPERFAMILY SSF46689 421 518 2.2E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_15660 0c2c8420e3d053e9338e9a501d119a4a 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 8.4E-12 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 C4901_15660 0c2c8420e3d053e9338e9a501d119a4a 329 SUPERFAMILY SSF52540 29 258 4.78E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15660 0c2c8420e3d053e9338e9a501d119a4a 329 Pfam PF00005 ABC transporter 36 188 3.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_15660 0c2c8420e3d053e9338e9a501d119a4a 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 323 1.6E-13 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 C4901_15660 0c2c8420e3d053e9338e9a501d119a4a 329 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_15660 0c2c8420e3d053e9338e9a501d119a4a 329 Gene3D G3DSA:3.40.50.300 8 328 1.1E-89 T 14-10-2018 C4901_15660 0c2c8420e3d053e9338e9a501d119a4a 329 SMART SM00382 45 237 9.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_13210 e99ac6e073b45ab0a2e2c3fded4d2b2f 197 Pfam PF02669 K+-transporting ATPase, c chain 7 187 1.2E-71 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 C4901_13210 e99ac6e073b45ab0a2e2c3fded4d2b2f 197 PIRSF PIRSF001296 2 193 6.2E-75 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 C4901_13210 e99ac6e073b45ab0a2e2c3fded4d2b2f 197 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 189 8.0E-70 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 C4901_13210 e99ac6e073b45ab0a2e2c3fded4d2b2f 197 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 3 190 34.453 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 Gene3D G3DSA:1.10.246.130 231 335 1.6E-18 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 335 353 4.0E-31 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 244 263 4.0E-31 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 30 55 4.0E-31 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 215 231 4.0E-31 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 359 377 4.0E-31 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 117 136 4.0E-31 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 390 405 4.0E-31 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 414 431 4.0E-31 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 SUPERFAMILY SSF56235 5 521 4.25E-128 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 Gene3D G3DSA:3.60.20.40 336 522 1.3E-50 T 14-10-2018 C4901_13370 bd3261cd4508dd100e3837bf90f6ea0a 522 Pfam PF01019 Gamma-glutamyltranspeptidase 23 517 1.7E-103 T 14-10-2018 C4901_14780 563968956497ed279da399f822e54d02 385 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C4901_14780 563968956497ed279da399f822e54d02 385 Pfam PF00266 Aminotransferase class-V 9 369 3.2E-71 T 14-10-2018 IPR000192 Aminotransferase class V domain C4901_14780 563968956497ed279da399f822e54d02 385 SUPERFAMILY SSF53383 9 377 2.1E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_14780 563968956497ed279da399f822e54d02 385 Gene3D G3DSA:3.90.1150.10 10 370 5.5E-129 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_14780 563968956497ed279da399f822e54d02 385 Gene3D G3DSA:3.40.640.10 20 259 5.5E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_14780 563968956497ed279da399f822e54d02 385 PIRSF PIRSF005572 6 383 1.9E-124 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 271 55.053 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 Gene3D G3DSA:1.10.166.10 2 69 9.9E-28 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 174 208 4.1E-12 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 Gene3D G3DSA:2.160.10.10 86 256 5.2E-56 T 14-10-2018 C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 4 68 1.3E-23 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 132 165 9.0E-4 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 SUPERFAMILY SSF51161 3 255 1.03E-73 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_09605 88d56916201c50fdbcab0e357c0f65a9 272 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 272 8.9E-145 T 14-10-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 C4901_13275 7abe8650ee3ad59647d26e22d8d895cb 399 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 387 7.0E-36 T 14-10-2018 IPR000160 GGDEF domain C4901_13275 7abe8650ee3ad59647d26e22d8d895cb 399 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 235 390 1.1E-36 T 14-10-2018 IPR000160 GGDEF domain C4901_13275 7abe8650ee3ad59647d26e22d8d895cb 399 Gene3D G3DSA:3.30.70.270 231 393 5.2E-44 T 14-10-2018 C4901_13275 7abe8650ee3ad59647d26e22d8d895cb 399 SUPERFAMILY SSF55073 241 391 1.33E-38 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_13275 7abe8650ee3ad59647d26e22d8d895cb 399 SMART SM00267 225 392 1.0E-35 T 14-10-2018 IPR000160 GGDEF domain C4901_02290 8f2f56c743b1178360754e7631c8fe11 178 SMART SM01219 74 178 9.4E-36 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_02290 8f2f56c743b1178360754e7631c8fe11 178 Pfam PF01491 Frataxin-like domain 75 174 3.9E-22 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_02290 8f2f56c743b1178360754e7631c8fe11 178 Gene3D G3DSA:3.30.920.10 72 178 1.6E-29 T 14-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_02290 8f2f56c743b1178360754e7631c8fe11 178 ProSitePatterns PS01344 Frataxin family signature. 121 135 - T 14-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_02290 8f2f56c743b1178360754e7631c8fe11 178 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 76 176 3.1E-28 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_02290 8f2f56c743b1178360754e7631c8fe11 178 SUPERFAMILY SSF55387 73 174 6.45E-25 T 14-10-2018 C4901_02290 8f2f56c743b1178360754e7631c8fe11 178 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 74 177 20.678 T 14-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 C4901_10850 61b2f990a9269cb6b80d6f8039777a43 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 1.5E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C4901_10850 61b2f990a9269cb6b80d6f8039777a43 107 Gene3D G3DSA:2.60.300.12 2 107 1.5E-37 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_10850 61b2f990a9269cb6b80d6f8039777a43 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 8.5E-22 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C4901_10850 61b2f990a9269cb6b80d6f8039777a43 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 5.8E-51 T 14-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 C4901_10850 61b2f990a9269cb6b80d6f8039777a43 107 SUPERFAMILY SSF89360 1 96 1.31E-31 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_10850 61b2f990a9269cb6b80d6f8039777a43 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 189 0.0018 T 14-10-2018 C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 Pfam PF00106 short chain dehydrogenase 7 200 9.8E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 SUPERFAMILY SSF51735 4 269 1.64E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.0E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.0E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.0E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.0E-17 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 Gene3D G3DSA:3.40.50.720 3 265 9.4E-61 T 14-10-2018 C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08750 6bbe78216369749c07eeb5d760d093e9 365 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.4E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_01275 c180e9dc2868123b3b534ee0a643c3e6 60 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 20 53 5.0E-8 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 C4901_04890 ea806df13c21c2aae3406e643610f4aa 413 Pfam PF13546 DDE superfamily endonuclease 17 253 2.0E-10 T 14-10-2018 IPR038721 Transposase IS701-like, DDE domain C4901_04890 ea806df13c21c2aae3406e643610f4aa 413 SUPERFAMILY SSF53098 177 331 5.08E-13 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_00720 9cdde1b376442b8264790447abe71642 321 Pfam PF00561 alpha/beta hydrolase fold 36 296 2.9E-28 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_00720 9cdde1b376442b8264790447abe71642 321 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 9 311 8.9E-122 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 C4901_00720 9cdde1b376442b8264790447abe71642 321 PIRSF PIRSF006431 1 315 1.2E-132 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 C4901_00720 9cdde1b376442b8264790447abe71642 321 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 37 45 3.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 C4901_00720 9cdde1b376442b8264790447abe71642 321 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 3.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 C4901_00720 9cdde1b376442b8264790447abe71642 321 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 106 120 3.5E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 C4901_00720 9cdde1b376442b8264790447abe71642 321 SUPERFAMILY SSF53474 4 295 1.32E-57 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_00720 9cdde1b376442b8264790447abe71642 321 Gene3D G3DSA:3.40.50.1820 1 312 1.9E-99 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_11825 90b20bb6d9cc54b0e5958bef34646527 90 Gene3D G3DSA:1.10.1200.10 1 84 2.0E-22 T 14-10-2018 IPR036736 ACP-like superfamily C4901_11825 90b20bb6d9cc54b0e5958bef34646527 90 Pfam PF00550 Phosphopantetheine attachment site 18 77 1.2E-7 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain C4901_11825 90b20bb6d9cc54b0e5958bef34646527 90 SUPERFAMILY SSF47336 4 80 1.7E-14 T 14-10-2018 IPR036736 ACP-like superfamily C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.5E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.5E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.5E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.5E-34 T 14-10-2018 IPR002220 DapA-like GO:0016829 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 5 287 5.2E-109 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 Gene3D G3DSA:3.20.20.70 1 291 3.0E-112 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 PIRSF PIRSF001365 1 291 2.1E-97 T 14-10-2018 IPR002220 DapA-like GO:0016829 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 SMART SM01130 1 289 2.3E-140 T 14-10-2018 IPR002220 DapA-like GO:0016829 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 287 3.1E-103 T 14-10-2018 IPR002220 DapA-like GO:0016829 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 SUPERFAMILY SSF51569 2 289 3.24E-102 T 14-10-2018 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 287 64.427 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 C4901_03765 6ac4b298b88b885a9b0b11ebfc50c7ca 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_07030 eaedf97a98746d7f3910a10838eb17d3 444 SMART SM00487 20 222 1.1E-56 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_07030 eaedf97a98746d7f3910a10838eb17d3 444 Pfam PF00270 DEAD/DEAH box helicase 25 190 1.4E-46 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 C4901_07030 eaedf97a98746d7f3910a10838eb17d3 444 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.0E-29 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_07030 eaedf97a98746d7f3910a10838eb17d3 444 Gene3D G3DSA:3.40.50.300 214 374 7.1E-51 T 14-10-2018 C4901_07030 eaedf97a98746d7f3910a10838eb17d3 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site C4901_07030 eaedf97a98746d7f3910a10838eb17d3 444 SMART SM00490 259 340 7.2E-33 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_07030 eaedf97a98746d7f3910a10838eb17d3 444 SUPERFAMILY SSF52540 72 361 3.85E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07030 eaedf97a98746d7f3910a10838eb17d3 444 Gene3D G3DSA:3.40.50.300 1 211 5.8E-77 T 14-10-2018 C4901_15775 b688e58708214f63843390a5f9b9d632 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 1.1E-23 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_15775 b688e58708214f63843390a5f9b9d632 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 8.3E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_15775 b688e58708214f63843390a5f9b9d632 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 8.3E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_15775 b688e58708214f63843390a5f9b9d632 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 8.3E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_15775 b688e58708214f63843390a5f9b9d632 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 8.3E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_15775 b688e58708214f63843390a5f9b9d632 71 Gene3D G3DSA:1.20.5.1150 16 54 1.2E-18 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_15775 b688e58708214f63843390a5f9b9d632 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 42 7.0E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_15775 b688e58708214f63843390a5f9b9d632 71 Pfam PF01165 Ribosomal protein S21 3 55 3.1E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_15775 b688e58708214f63843390a5f9b9d632 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.191 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_10360 54d5de620090436c26775a0bb35be010 319 SUPERFAMILY SSF52096 5 316 1.01E-100 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C4901_10360 54d5de620090436c26775a0bb35be010 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1 317 2.8E-148 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_10360 54d5de620090436c26775a0bb35be010 319 Gene3D G3DSA:3.90.226.10 1 318 1.8E-118 T 14-10-2018 C4901_10360 54d5de620090436c26775a0bb35be010 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 148 2.2E-61 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_10360 54d5de620090436c26775a0bb35be010 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 316 49.019 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_10360 54d5de620090436c26775a0bb35be010 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 197 206 1.8E-46 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_10360 54d5de620090436c26775a0bb35be010 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 153 166 1.8E-46 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_10360 54d5de620090436c26775a0bb35be010 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 88 99 1.8E-46 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_10360 54d5de620090436c26775a0bb35be010 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 113 131 1.8E-46 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_10360 54d5de620090436c26775a0bb35be010 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 134 150 1.8E-46 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_10360 54d5de620090436c26775a0bb35be010 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 169 182 1.8E-46 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_16570 b98489cd22ae320144e274d7df748364 336 Pfam PF07690 Major Facilitator Superfamily 6 249 6.5E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_16570 b98489cd22ae320144e274d7df748364 336 Gene3D G3DSA:1.20.1250.20 124 314 7.1E-39 T 14-10-2018 C4901_16570 b98489cd22ae320144e274d7df748364 336 Gene3D G3DSA:1.20.1250.20 2 65 5.1E-7 T 14-10-2018 C4901_16570 b98489cd22ae320144e274d7df748364 336 SUPERFAMILY SSF103473 4 312 4.58E-26 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_03160 b850ac602355501e4f170acaba7179b3 252 Gene3D G3DSA:3.20.20.70 1 241 1.2E-87 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_03160 b850ac602355501e4f170acaba7179b3 252 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 239 36.193 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 C4901_03160 b850ac602355501e4f170acaba7179b3 252 SUPERFAMILY SSF51366 1 238 1.26E-75 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C4901_03160 b850ac602355501e4f170acaba7179b3 252 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 3 235 2.1E-77 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 C4901_03160 b850ac602355501e4f170acaba7179b3 252 Pfam PF00977 Histidine biosynthesis protein 3 231 9.7E-80 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 PIRSF PIRSF000445 1 419 8.8E-157 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 169 303 2.0E-45 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 414 7.2E-137 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 96 119 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 415 31.241 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 SUPERFAMILY SSF69742 1 155 4.58E-46 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 SUPERFAMILY SSF51735 159 312 1.08E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 Gene3D G3DSA:3.40.50.720 158 310 1.6E-44 T 14-10-2018 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 317 414 6.0E-26 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 Gene3D G3DSA:3.30.460.30 2 155 5.4E-53 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 SUPERFAMILY SSF69075 314 415 4.97E-27 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_02390 fe60ef1fc4ca8c787f9b6fe1a59c80f5 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 153 4.4E-48 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 C4901_05975 821e73d2fb02aef082f5162f5d41877a 851 Gene3D G3DSA:3.40.50.2000 427 664 2.5E-33 T 14-10-2018 C4901_05975 821e73d2fb02aef082f5162f5d41877a 851 Gene3D G3DSA:3.40.50.2000 116 184 1.8E-9 T 14-10-2018 C4901_05975 821e73d2fb02aef082f5162f5d41877a 851 PIRSF PIRSF000460 4 793 4.6E-240 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 C4901_05975 821e73d2fb02aef082f5162f5d41877a 851 Gene3D G3DSA:3.40.50.2000 264 421 1.1E-11 T 14-10-2018 C4901_05975 821e73d2fb02aef082f5162f5d41877a 851 Pfam PF11897 Protein of unknown function (DUF3417) 14 122 3.5E-31 T 14-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 C4901_05975 821e73d2fb02aef082f5162f5d41877a 851 SUPERFAMILY SSF53756 10 744 4.19E-191 T 14-10-2018 C4901_05975 821e73d2fb02aef082f5162f5d41877a 851 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 109 711 6.0E-239 T 14-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 C4901_05975 821e73d2fb02aef082f5162f5d41877a 851 Pfam PF00343 Carbohydrate phosphorylase 272 622 5.3E-16 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 C4901_08645 8f6237d19308cd93d97c8c4d8997b435 450 SUPERFAMILY SSF53098 118 425 5.01E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_00060 8f6237d19308cd93d97c8c4d8997b435 450 SUPERFAMILY SSF53098 118 425 5.01E-6 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_14960 33b3bef740a351d6123cd5d2c98d1a4b 358 Pfam PF01979 Amidohydrolase family 25 319 1.1E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C4901_14960 33b3bef740a351d6123cd5d2c98d1a4b 358 Hamap MF_00219 Dihydroorotase [pyrC]. 16 357 45.885 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_14960 33b3bef740a351d6123cd5d2c98d1a4b 358 SUPERFAMILY SSF51556 17 356 4.54E-140 T 14-10-2018 IPR032466 Metal-dependent hydrolase C4901_14960 33b3bef740a351d6123cd5d2c98d1a4b 358 Gene3D G3DSA:3.20.20.140 17 358 1.5E-104 T 14-10-2018 C4901_14960 33b3bef740a351d6123cd5d2c98d1a4b 358 PIRSF PIRSF001237 14 358 4.0E-137 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_14960 33b3bef740a351d6123cd5d2c98d1a4b 358 ProSitePatterns PS00482 Dihydroorotase signature 1. 25 33 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_14960 33b3bef740a351d6123cd5d2c98d1a4b 358 ProSitePatterns PS00483 Dihydroorotase signature 2. 259 270 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_14960 33b3bef740a351d6123cd5d2c98d1a4b 358 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 18 356 1.4E-137 T 14-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_07675 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF14236 Domain of unknown function (DUF4338) 1 163 6.8E-36 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_07675 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF13808 DDE_Tnp_1-associated 192 286 1.0E-18 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_05650 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF14236 Domain of unknown function (DUF4338) 1 163 6.8E-36 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_05650 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF13808 DDE_Tnp_1-associated 192 286 1.0E-18 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_16300 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF14236 Domain of unknown function (DUF4338) 1 163 6.8E-36 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_16300 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF13808 DDE_Tnp_1-associated 192 286 1.0E-18 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_00750 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF14236 Domain of unknown function (DUF4338) 1 163 6.8E-36 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_00750 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF13808 DDE_Tnp_1-associated 192 286 1.0E-18 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_02820 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF14236 Domain of unknown function (DUF4338) 1 163 6.8E-36 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_02820 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF13808 DDE_Tnp_1-associated 192 286 1.0E-18 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_05555 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF14236 Domain of unknown function (DUF4338) 1 163 6.8E-36 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_05555 fa7385a7823604d75c13a34fba2418d6 338 Pfam PF13808 DDE_Tnp_1-associated 192 286 1.0E-18 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 SUPERFAMILY SSF51126 6 435 7.59E-53 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 Gene3D G3DSA:2.160.20.10 4 435 6.3E-61 T 14-10-2018 IPR012334 Pectin lyase fold C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 Pfam PF13229 Right handed beta helix region 97 231 3.8E-10 T 14-10-2018 IPR039448 Right handed beta helix domain C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 SMART SM00710 181 203 160.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 SMART SM00710 298 320 4800.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 SMART SM00710 265 290 2400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 SMART SM00710 205 227 52.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 SMART SM00710 242 264 5600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_05515 5a58197c1c0aec1e64a4dbb4518b4303 435 SMART SM00710 126 157 1300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 SUPERFAMILY SSF63418 7 97 9.02E-19 T 14-10-2018 IPR035911 MurE/MurF, N-terminal C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 SUPERFAMILY SSF53244 324 479 3.01E-44 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 Gene3D G3DSA:3.40.1190.10 97 327 5.5E-75 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 Pfam PF08245 Mur ligase middle domain 106 302 1.5E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 SUPERFAMILY SSF53623 97 322 5.9E-71 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 Pfam PF02875 Mur ligase family, glutamate ligase domain 324 410 2.4E-21 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 Pfam PF01225 Mur ligase family, catalytic domain 20 67 4.1E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 3 479 33.587 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 Gene3D G3DSA:3.40.1390.10 1 96 2.5E-22 T 14-10-2018 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 Gene3D G3DSA:3.90.190.20 334 482 1.3E-55 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_03375 b4245401e41bce8e367dd1fe78c807da 482 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 18 479 2.6E-154 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 Gene3D G3DSA:1.10.1040.10 217 349 2.3E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 208 342 9.0E-38 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 PIRSF PIRSF000114 18 349 1.3E-75 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 24 173 4.7E-42 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 Gene3D G3DSA:3.40.50.720 18 214 2.5E-44 T 14-10-2018 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 21 344 30.629 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 216 237 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 SUPERFAMILY SSF48179 207 347 3.23E-38 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 150 170 2.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 201 225 2.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 266 283 2.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 226 250 2.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 75 102 2.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 25 42 2.7E-41 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 C4901_04915 eaebac0cca23ffd1db412bdc2cf92d04 349 SUPERFAMILY SSF51735 24 174 2.71E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_03955 9471e6b42807d4f67cccf3beaab57eac 161 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 5 89 7.3E-13 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_03955 9471e6b42807d4f67cccf3beaab57eac 161 Pfam PF07282 Putative transposase DNA-binding domain 62 126 5.7E-23 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_08325 137d1bed52b99ee818fa2b2dd34dc50c 382 SUPERFAMILY SSF55729 183 354 9.0E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_08325 137d1bed52b99ee818fa2b2dd34dc50c 382 Pfam PF04339 Peptidogalycan biosysnthesis/recognition 14 380 6.4E-140 T 14-10-2018 IPR007434 Peptidogalycan biosysnthesis/recognition C4901_15690 b14ba23649d4d97057cd2cd273d84ad9 180 Pfam PF09722 Protein of unknown function (DUF2384) 137 177 2.0E-11 T 14-10-2018 IPR024467 Domain of unknown function DUF2384 C4901_01215 45d52cd08ecaf041914c04c24705e624 685 SUPERFAMILY SSF63825 18 126 1.15E-9 T 14-10-2018 C4901_01215 45d52cd08ecaf041914c04c24705e624 685 Pfam PF10282 Lactonase, 7-bladed beta-propeller 366 495 3.0E-12 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller C4901_01215 45d52cd08ecaf041914c04c24705e624 685 SUPERFAMILY SSF51004 313 630 1.96E-27 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily C4901_01215 45d52cd08ecaf041914c04c24705e624 685 SUPERFAMILY SSF101898 36 285 4.45E-6 T 14-10-2018 C4901_01215 45d52cd08ecaf041914c04c24705e624 685 Gene3D G3DSA:2.130.10.10 428 507 4.9E-8 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_01215 45d52cd08ecaf041914c04c24705e624 685 Gene3D G3DSA:2.130.10.10 4 128 5.1E-14 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_01215 45d52cd08ecaf041914c04c24705e624 685 Gene3D G3DSA:2.130.10.10 508 638 1.3E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_01215 45d52cd08ecaf041914c04c24705e624 685 Gene3D G3DSA:2.130.10.10 157 426 8.1E-18 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_12795 1c3133f6ccef21f22fda8530c8124fea 427 SUPERFAMILY SSF53244 281 414 2.93E-25 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_12795 1c3133f6ccef21f22fda8530c8124fea 427 Gene3D G3DSA:3.40.1190.10 1 281 1.1E-85 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_12795 1c3133f6ccef21f22fda8530c8124fea 427 Pfam PF08245 Mur ligase middle domain 45 258 1.5E-9 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C4901_12795 1c3133f6ccef21f22fda8530c8124fea 427 Gene3D G3DSA:3.90.190.20 282 422 1.2E-26 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_12795 1c3133f6ccef21f22fda8530c8124fea 427 SUPERFAMILY SSF53623 4 279 3.43E-81 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_12795 1c3133f6ccef21f22fda8530c8124fea 427 PIRSF PIRSF001563 1 419 5.3E-97 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 C4901_12795 1c3133f6ccef21f22fda8530c8124fea 427 TIGRFAM TIGR01499 folC: bifunctional protein FolC 28 413 2.5E-93 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 C4901_02430 902293e599f2a56f217ab8cca181285e 199 Pfam PF01195 Peptidyl-tRNA hydrolase 8 187 7.6E-51 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C4901_02430 902293e599f2a56f217ab8cca181285e 199 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 182 33.029 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C4901_02430 902293e599f2a56f217ab8cca181285e 199 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 8 189 6.2E-54 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 C4901_02430 902293e599f2a56f217ab8cca181285e 199 Gene3D G3DSA:3.40.50.1470 3 193 4.6E-63 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 C4901_02430 902293e599f2a56f217ab8cca181285e 199 SUPERFAMILY SSF53178 8 190 1.96E-62 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 C4901_02430 902293e599f2a56f217ab8cca181285e 199 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Gene3D G3DSA:1.10.1790.20 1134 1312 1.7E-65 T 14-10-2018 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Pfam PF05000 RNA polymerase Rpb1, domain 4 673 763 7.1E-19 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 3.8E-87 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Gene3D G3DSA:1.10.40.90 374 416 2.1E-22 T 14-10-2018 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1028 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Gene3D G3DSA:2.40.50.100 1150 1213 1.7E-65 T 14-10-2018 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Gene3D G3DSA:1.10.274.100 490 640 1.3E-40 T 14-10-2018 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Gene3D G3DSA:1.10.150.390 1314 1375 9.9E-28 T 14-10-2018 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1375 19.044 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 1.1E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 399 1.7E-8 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Gene3D G3DSA:2.40.50.100 1023 1125 3.4E-31 T 14-10-2018 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Gene3D G3DSA:2.40.50.100 948 1022 1.6E-27 T 14-10-2018 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 7.0E-29 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 SUPERFAMILY SSF64484 16 1364 0.0 T 14-10-2018 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Gene3D G3DSA:1.10.132.30 641 790 2.2E-64 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 SMART SM00663 235 514 6.0E-182 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14155 20bca812d64d459aafe41cc1a7809dd1 1401 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1313 4.0E-75 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_04075 147fbb9635ca32947f65e9d3557d8115 182 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 163 4.1E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C4901_04075 147fbb9635ca32947f65e9d3557d8115 182 SUPERFAMILY SSF88659 103 165 9.59E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_04075 147fbb9635ca32947f65e9d3557d8115 182 Gene3D G3DSA:1.10.1740.10 3 85 1.1E-20 T 14-10-2018 C4901_04075 147fbb9635ca32947f65e9d3557d8115 182 Pfam PF08281 Sigma-70, region 4 110 161 8.3E-17 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_04075 147fbb9635ca32947f65e9d3557d8115 182 Pfam PF04542 Sigma-70 region 2 18 82 4.7E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C4901_04075 147fbb9635ca32947f65e9d3557d8115 182 SUPERFAMILY SSF88946 12 96 9.81E-20 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C4901_04075 147fbb9635ca32947f65e9d3557d8115 182 Gene3D G3DSA:1.10.10.10 105 170 9.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_13705 98bbc474b58f50c303e64d137f2cee67 60 SUPERFAMILY SSF46955 7 56 6.59E-6 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_13705 98bbc474b58f50c303e64d137f2cee67 60 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 7 55 1.1E-13 T 14-10-2018 IPR010260 DNA-binding transcriptional activator AlpA C4901_01960 5452f4632729b0f1f3d457f821631280 318 Gene3D G3DSA:1.20.1510.10 28 221 9.1E-42 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C4901_01960 5452f4632729b0f1f3d457f821631280 318 SUPERFAMILY SSF160240 227 299 1.7E-9 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 C4901_01960 5452f4632729b0f1f3d457f821631280 318 SUPERFAMILY SSF161111 26 222 3.27E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily C4901_01960 5452f4632729b0f1f3d457f821631280 318 Pfam PF01545 Cation efflux family 31 221 2.3E-45 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C4901_01960 5452f4632729b0f1f3d457f821631280 318 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 29 299 7.6E-83 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 C4901_00785 9d6564a89ac6818a6fb66060ecc0df81 312 PIRSF PIRSF026649 11 311 3.3E-85 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C4901_00785 9d6564a89ac6818a6fb66060ecc0df81 312 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 303 6.2E-61 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C4901_08405 23f90e5aa34fecc6cd29970041d3ead2 206 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 197 1.6E-54 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 C4901_08405 23f90e5aa34fecc6cd29970041d3ead2 206 Pfam PF01914 MarC family integral membrane protein 5 200 2.9E-55 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 C4901_12710 9c5755866bd6386cec005a56a13d317f 201 Hamap MF_00664 Phosphatidylserine decarboxylase proenzyme [psd]. 2 194 33.365 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 C4901_12710 9c5755866bd6386cec005a56a13d317f 201 Pfam PF02666 Phosphatidylserine decarboxylase 22 190 2.9E-32 T 14-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 C4901_12710 9c5755866bd6386cec005a56a13d317f 201 TIGRFAM TIGR00164 PS_decarb_rel: phosphatidylserine decarboxylase homolog 8 193 3.8E-61 T 14-10-2018 IPR033175 Phosphatidylserine decarboxylase, archaeal-type KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 C4901_02860 c4484eead36b02ab1d37e39a9829587d 158 SUPERFAMILY SSF75217 1 154 2.16E-41 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases C4901_02860 c4484eead36b02ab1d37e39a9829587d 158 Gene3D G3DSA:3.40.1280.10 2 156 3.2E-43 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal C4901_02860 c4484eead36b02ab1d37e39a9829587d 158 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 4.9E-42 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C4901_02860 c4484eead36b02ab1d37e39a9829587d 158 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 26.148 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C4901_02860 c4484eead36b02ab1d37e39a9829587d 158 PIRSF PIRSF004505 1 155 2.3E-36 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C4901_02860 c4484eead36b02ab1d37e39a9829587d 158 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 3 155 2.3E-46 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 C4901_16165 e3ffe3cd8dc2e83c19c23649845d9520 128 Gene3D G3DSA:3.40.50.1010 1 126 1.4E-24 T 14-10-2018 C4901_16165 e3ffe3cd8dc2e83c19c23649845d9520 128 Pfam PF01850 PIN domain 1 112 2.9E-8 T 14-10-2018 IPR002716 PIN domain C4901_16165 e3ffe3cd8dc2e83c19c23649845d9520 128 SUPERFAMILY SSF88723 1 127 2.64E-24 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_09495 f56ea0b2ca26d14951132d5f8d2b6db2 334 Pfam PF01343 Peptidase family S49 150 290 4.9E-33 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 C4901_09495 f56ea0b2ca26d14951132d5f8d2b6db2 334 SUPERFAMILY SSF52096 84 283 5.94E-34 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C4901_09495 f56ea0b2ca26d14951132d5f8d2b6db2 334 Gene3D G3DSA:3.90.226.10 88 286 7.2E-55 T 14-10-2018 C4901_09495 f56ea0b2ca26d14951132d5f8d2b6db2 334 Gene3D G3DSA:3.40.1750.20 187 253 7.2E-55 T 14-10-2018 C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 Gene3D G3DSA:3.30.420.40 3 314 4.1E-117 T 14-10-2018 C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 SUPERFAMILY SSF53067 1 308 9.26E-40 T 14-10-2018 C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 Gene3D G3DSA:3.30.420.40 128 292 4.1E-117 T 14-10-2018 C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 96 115 3.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 153 174 3.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 3.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 262 271 3.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 75 95 3.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 130 142 3.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 330 60.733 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 305 7.4E-109 T 14-10-2018 IPR017861 Kae1/TsaD family C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 312 6.8E-123 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 C4901_15780 366a82f2f6a0f5c3a3a1aaf41fd400d2 336 Pfam PF00814 Glycoprotease family 25 306 1.2E-93 T 14-10-2018 IPR000905 Gcp-like domain C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 Gene3D G3DSA:3.10.580.10 45 196 9.0E-54 T 14-10-2018 C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 SUPERFAMILY SSF54631 61 200 3.92E-34 T 14-10-2018 C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 Gene3D G3DSA:3.30.465.10 199 281 1.4E-29 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 Pfam PF00571 CBS domain 91 122 1.0E-5 T 14-10-2018 IPR000644 CBS domain C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 Pfam PF00571 CBS domain 136 185 3.9E-5 T 14-10-2018 IPR000644 CBS domain C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 Pfam PF03471 Transporter associated domain 203 278 6.2E-22 T 14-10-2018 IPR005170 Transporter-associated domain C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 SUPERFAMILY SSF56176 201 283 9.82E-24 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 SMART SM00116 73 122 0.092 T 14-10-2018 IPR000644 CBS domain C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 SMART SM00116 137 185 1.7 T 14-10-2018 IPR000644 CBS domain C4901_02730 d8c0eb19b1209080280b38ec6b4e32df 287 SMART SM01091 202 280 3.7E-31 T 14-10-2018 IPR005170 Transporter-associated domain C4901_14210 15b642dc5167b4b4a99af18e2e405fa1 45 SUPERFAMILY SSF52540 4 41 1.64E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14210 15b642dc5167b4b4a99af18e2e405fa1 45 Gene3D G3DSA:3.40.50.300 1 44 9.4E-11 T 14-10-2018 C4901_14210 15b642dc5167b4b4a99af18e2e405fa1 45 Pfam PF00009 Elongation factor Tu GTP binding domain 10 38 4.0E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 C4901_14810 981e6a8a322e0c5d3cc023dea37ead30 131 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 26 130 1.4E-34 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C4901_14810 981e6a8a322e0c5d3cc023dea37ead30 131 Pfam PF01521 Iron-sulphur cluster biosynthesis 26 127 3.0E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C4901_14810 981e6a8a322e0c5d3cc023dea37ead30 131 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 112 129 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 C4901_14810 981e6a8a322e0c5d3cc023dea37ead30 131 SUPERFAMILY SSF89360 26 120 4.71E-28 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_14810 981e6a8a322e0c5d3cc023dea37ead30 131 Gene3D G3DSA:2.60.300.12 26 131 5.9E-33 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_10470 3ba5b6d33e8c4555b5dd6e51229cf768 428 Pfam PF01610 Transposase 168 410 7.4E-70 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_10230 3ba5b6d33e8c4555b5dd6e51229cf768 428 Pfam PF01610 Transposase 168 410 7.4E-70 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_04790 94cf597d57e1426c59634ad509a7ac43 222 Gene3D G3DSA:3.40.50.150 15 208 1.7E-20 T 14-10-2018 C4901_04790 94cf597d57e1426c59634ad509a7ac43 222 SUPERFAMILY SSF53335 32 200 1.44E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_04790 94cf597d57e1426c59634ad509a7ac43 222 Pfam PF13649 Methyltransferase domain 54 128 3.5E-10 T 14-10-2018 C4901_00540 7eaaf8fdcc841e85ed0dadf63b311fb4 147 Pfam PF01220 Dehydroquinase class II 4 140 5.9E-56 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C4901_00540 7eaaf8fdcc841e85ed0dadf63b311fb4 147 PIRSF PIRSF001399 1 146 8.5E-55 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C4901_00540 7eaaf8fdcc841e85ed0dadf63b311fb4 147 SUPERFAMILY SSF52304 3 145 1.7E-58 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C4901_00540 7eaaf8fdcc841e85ed0dadf63b311fb4 147 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 147 67.34 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C4901_00540 7eaaf8fdcc841e85ed0dadf63b311fb4 147 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 4 143 1.0E-55 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C4901_00540 7eaaf8fdcc841e85ed0dadf63b311fb4 147 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 17 141 7.0E-42 T 14-10-2018 C4901_00540 7eaaf8fdcc841e85ed0dadf63b311fb4 147 Gene3D G3DSA:3.40.50.9100 1 146 1.6E-60 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C4901_00540 7eaaf8fdcc841e85ed0dadf63b311fb4 147 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 SUPERFAMILY SSF55666 457 554 2.95E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Pfam PF03725 3' exoribonuclease family, domain 2 458 528 8.8E-7 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Pfam PF03725 3' exoribonuclease family, domain 2 147 209 7.0E-10 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 246 319 6.0E-16 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Pfam PF00013 KH domain 555 612 6.7E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Gene3D G3DSA:2.40.50.140 621 693 3.4E-30 T 14-10-2018 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Gene3D G3DSA:3.30.230.70 234 548 1.2E-111 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 PIRSF PIRSF005499 1 694 2.2E-293 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 692 30.358 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Gene3D G3DSA:3.30.1370.10 549 620 2.5E-21 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 SUPERFAMILY SSF55666 144 235 8.69E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Pfam PF00575 S1 RNA binding domain 618 689 4.3E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 SMART SM00322 551 616 1.5E-12 T 14-10-2018 IPR004087 K Homology domain GO:0003676 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 SUPERFAMILY SSF54211 290 487 2.58E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_04685 e40b236e3211708515162acf3dc28a8c 694 SUPERFAMILY SSF54211 4 143 2.78E-48 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_04685 e40b236e3211708515162acf3dc28a8c 694 SMART SM00316 619 689 1.6E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Pfam PF01138 3' exoribonuclease family, domain 1 323 454 1.7E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Pfam PF01138 3' exoribonuclease family, domain 1 15 143 4.9E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 SUPERFAMILY SSF54791 546 621 4.63E-17 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 Gene3D G3DSA:3.30.230.70 1 228 8.0E-78 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 C4901_04685 e40b236e3211708515162acf3dc28a8c 694 SUPERFAMILY SSF50249 607 691 2.57E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_11720 26d3b5797d76132cb65771153df7574d 293 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 4 273 1.1E-77 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C4901_11720 26d3b5797d76132cb65771153df7574d 293 Hamap MF_00158 Pantothenate synthetase [panC]. 2 275 35.534 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C4901_11720 26d3b5797d76132cb65771153df7574d 293 Gene3D G3DSA:3.40.50.620 1 174 6.7E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_11720 26d3b5797d76132cb65771153df7574d 293 Pfam PF02569 Pantoate-beta-alanine ligase 7 273 4.6E-88 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 C4901_11720 26d3b5797d76132cb65771153df7574d 293 Gene3D G3DSA:3.30.1300.10 175 284 9.7E-26 T 14-10-2018 C4901_11720 26d3b5797d76132cb65771153df7574d 293 SUPERFAMILY SSF52374 5 275 8.61E-90 T 14-10-2018 C4901_16580 9b568006a15878bb7e18e85e1745ca5a 139 Pfam PF00581 Rhodanese-like domain 24 137 2.8E-9 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_16580 9b568006a15878bb7e18e85e1745ca5a 139 Gene3D G3DSA:3.40.250.10 5 139 7.5E-20 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_16580 9b568006a15878bb7e18e85e1745ca5a 139 SUPERFAMILY SSF52821 10 138 1.06E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_16580 9b568006a15878bb7e18e85e1745ca5a 139 SMART SM00450 14 139 4.4E-7 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_07280 69e20076b4d1fd81ae5911a056c59748 338 Pfam PF00589 Phage integrase family 170 330 2.6E-21 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_07280 69e20076b4d1fd81ae5911a056c59748 338 SUPERFAMILY SSF56349 64 333 1.91E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_07280 69e20076b4d1fd81ae5911a056c59748 338 Gene3D G3DSA:1.10.150.130 58 169 9.4E-6 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_07280 69e20076b4d1fd81ae5911a056c59748 338 Gene3D G3DSA:1.10.443.10 170 337 2.5E-32 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 Pfam PF06723 MreB/Mbl protein 10 339 1.5E-144 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 SUPERFAMILY SSF53067 155 335 3.71E-43 T 14-10-2018 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 Gene3D G3DSA:3.90.640.10 191 264 1.3E-125 T 14-10-2018 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 Gene3D G3DSA:3.30.420.40 159 322 1.3E-125 T 14-10-2018 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 137 156 9.3E-64 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 53 71 9.3E-64 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 73 96 9.3E-64 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 305 331 9.3E-64 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 192 212 9.3E-64 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 340 9.1E-154 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 Gene3D G3DSA:3.30.420.40 13 332 1.3E-125 T 14-10-2018 C4901_01445 d36b2c73a7c5f324f5c2a7b118f2e3dc 347 SUPERFAMILY SSF53067 9 151 2.8E-38 T 14-10-2018 C4901_16095 911034b14c58df729a833162819676e8 298 SUPERFAMILY SSF81606 13 250 2.09E-41 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_16095 911034b14c58df729a833162819676e8 298 Gene3D G3DSA:3.60.40.10 3 252 9.0E-44 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_16095 911034b14c58df729a833162819676e8 298 Pfam PF13672 Protein phosphatase 2C 15 213 2.8E-14 T 14-10-2018 C4901_16095 911034b14c58df729a833162819676e8 298 SMART SM00331 15 249 1.7E-11 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_16095 911034b14c58df729a833162819676e8 298 SMART SM00332 1 247 5.7E-5 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_11995 4b22244f5e5d7655d7dfec106f928871 628 Gene3D G3DSA:3.40.50.720 287 594 6.9E-106 T 14-10-2018 C4901_11995 4b22244f5e5d7655d7dfec106f928871 628 Pfam PF02719 Polysaccharide biosynthesis protein 291 572 2.5E-113 T 14-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain C4901_11995 4b22244f5e5d7655d7dfec106f928871 628 SUPERFAMILY SSF51735 149 277 1.81E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_11995 4b22244f5e5d7655d7dfec106f928871 628 Gene3D G3DSA:3.40.50.720 147 272 7.9E-34 T 14-10-2018 C4901_11995 4b22244f5e5d7655d7dfec106f928871 628 SUPERFAMILY SSF51735 289 552 7.59E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_11995 4b22244f5e5d7655d7dfec106f928871 628 Pfam PF13727 CoA-binding domain 71 246 1.6E-14 T 14-10-2018 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 193 268 3.5E-26 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 Pfam PF12833 Helix-turn-helix domain 27 101 9.1E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 Gene3D G3DSA:1.10.10.10 192 277 6.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 SUPERFAMILY SSF46689 4 55 9.86E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 195 272 2.3E-24 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 Gene3D G3DSA:1.10.10.60 5 101 6.3E-16 T 14-10-2018 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 243 249 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 SUPERFAMILY SSF53155 109 187 2.35E-17 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 SUPERFAMILY SSF46767 192 272 9.68E-25 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 SMART SM00342 21 103 1.5E-11 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 C4901_16775 e21da391e525839a5be08b3c8d2ad7a3 278 Gene3D G3DSA:3.30.160.70 102 188 3.1E-14 T 14-10-2018 C4901_07940 a1299200e3a633b04498b4004fe87612 420 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 240 412 1.3E-9 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 C4901_07940 a1299200e3a633b04498b4004fe87612 420 SUPERFAMILY SSF53067 235 414 1.81E-14 T 14-10-2018 C4901_07940 a1299200e3a633b04498b4004fe87612 420 SUPERFAMILY SSF53067 6 231 8.17E-27 T 14-10-2018 C4901_07940 a1299200e3a633b04498b4004fe87612 420 Gene3D G3DSA:3.30.420.40 1 225 1.8E-29 T 14-10-2018 C4901_07940 a1299200e3a633b04498b4004fe87612 420 Gene3D G3DSA:3.30.420.40 226 418 6.8E-25 T 14-10-2018 C4901_07940 a1299200e3a633b04498b4004fe87612 420 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 228 1.9E-11 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 10 85 23.51 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 11 81 2.0E-24 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 Gene3D G3DSA:2.40.50.140 6 88 1.3E-32 T 14-10-2018 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 Pfam PF00366 Ribosomal protein S17 15 81 4.4E-31 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 PRINTS PR00973 Ribosomal protein S17 family signature 61 71 1.2E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 PRINTS PR00973 Ribosomal protein S17 family signature 71 78 1.2E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 PRINTS PR00973 Ribosomal protein S17 family signature 29 52 1.2E-12 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 SUPERFAMILY SSF50249 10 86 3.86E-30 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 ProSitePatterns PS00056 Ribosomal protein S17 signature. 61 73 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14080 b46b43bcb0426f0384e5e4dca1059384 90 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 11 81 5.5E-34 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_15980 46cdd883e9f6188a41f25f73bd09e1e9 229 Pfam PF03412 Peptidase C39 family 50 183 5.8E-19 T 14-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 C4901_15980 46cdd883e9f6188a41f25f73bd09e1e9 229 Gene3D G3DSA:3.90.70.10 38 192 9.6E-33 T 14-10-2018 C4901_09855 34d86f1bf34c6fbfe00efd3518944998 155 SUPERFAMILY SSF51182 34 134 6.31E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_09855 34d86f1bf34c6fbfe00efd3518944998 155 Pfam PF07883 Cupin domain 49 120 2.0E-18 T 14-10-2018 IPR013096 Cupin 2, conserved barrel C4901_09855 34d86f1bf34c6fbfe00efd3518944998 155 Gene3D G3DSA:2.60.120.10 6 155 2.4E-47 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_03145 97625375c49720b1f45c2efaadc2084c 355 Gene3D G3DSA:3.40.640.10 49 262 8.0E-102 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_03145 97625375c49720b1f45c2efaadc2084c 355 SUPERFAMILY SSF53383 10 355 8.74E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_03145 97625375c49720b1f45c2efaadc2084c 355 Pfam PF00155 Aminotransferase class I and II 53 351 2.9E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C4901_03145 97625375c49720b1f45c2efaadc2084c 355 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 355 50.058 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C4901_03145 97625375c49720b1f45c2efaadc2084c 355 Gene3D G3DSA:3.90.1150.10 13 350 8.0E-102 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_14845 0d21e91fe7e60ef0cf544cf2846be01a 120 PIRSF PIRSF005790 8 114 9.9E-30 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 C4901_14845 0d21e91fe7e60ef0cf544cf2846be01a 120 Pfam PF03206 Nitrogen fixation protein NifW 14 103 8.5E-31 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 C4901_14845 0d21e91fe7e60ef0cf544cf2846be01a 120 Hamap MF_00529 Nitrogenase-stabilizing/protective protein NifW [nifW]. 11 113 20.843 T 14-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 C4901_04440 11fcf571eb0bed38921ea2629441bfc2 117 Pfam PF03658 RnfH family Ubiquitin 8 87 1.3E-21 T 14-10-2018 IPR005346 RnfH protein C4901_04440 11fcf571eb0bed38921ea2629441bfc2 117 SUPERFAMILY SSF54285 7 78 6.02E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C4901_04440 11fcf571eb0bed38921ea2629441bfc2 117 Gene3D G3DSA:3.10.20.280 2 89 2.0E-21 T 14-10-2018 IPR037021 RnfH superfamily C4901_04440 11fcf571eb0bed38921ea2629441bfc2 117 Hamap MF_00460 Protein RnfH [rnfH]. 6 96 17.105 T 14-10-2018 IPR005346 RnfH protein C4901_15615 272736cb78061efc32d7b1aaf6224222 300 Gene3D G3DSA:3.20.20.450 72 296 2.2E-36 T 14-10-2018 IPR035919 EAL domain superfamily C4901_15615 272736cb78061efc32d7b1aaf6224222 300 SMART SM00052 65 293 2.5E-11 T 14-10-2018 IPR001633 EAL domain C4901_15615 272736cb78061efc32d7b1aaf6224222 300 Pfam PF00563 EAL domain 122 286 4.3E-29 T 14-10-2018 IPR001633 EAL domain C4901_15615 272736cb78061efc32d7b1aaf6224222 300 SUPERFAMILY SSF141868 79 288 4.84E-35 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 SMART SM00411 3 92 1.7E-37 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 Gene3D G3DSA:4.10.520.10 1 97 2.5E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 SUPERFAMILY SSF47729 3 94 2.06E-30 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 2.4E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 2.4E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 2.4E-15 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 2.1E-44 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 29.302 T 14-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 C4901_05595 d2ee485927ed9542d38aa27c21cc6b3f 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 3.6E-29 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 295 611 2.1E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 Gene3D G3DSA:3.50.50.100 292 689 2.3E-120 T 14-10-2018 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 SUPERFAMILY SSF51905 295 627 7.62E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 447 465 3.5E-12 T 14-10-2018 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 315 3.5E-12 T 14-10-2018 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 387 405 3.5E-12 T 14-10-2018 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 568 590 3.5E-12 T 14-10-2018 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 Pfam PF07681 DoxX 28 108 2.7E-11 T 14-10-2018 IPR032808 DoxX family C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 447 472 6.5E-6 T 14-10-2018 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 295 317 6.5E-6 T 14-10-2018 C4901_12385 710e79ac6cdf94fe9b3b2d506e83216a 711 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 583 590 6.5E-6 T 14-10-2018 C4901_06660 4fcb329d5016a57963399e54f25da98f 259 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_06660 4fcb329d5016a57963399e54f25da98f 259 Pfam PF00005 ABC transporter 47 178 1.7E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_06660 4fcb329d5016a57963399e54f25da98f 259 SUPERFAMILY SSF52540 40 235 1.38E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_06660 4fcb329d5016a57963399e54f25da98f 259 SMART SM00382 56 256 7.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_06660 4fcb329d5016a57963399e54f25da98f 259 Gene3D G3DSA:3.40.50.300 33 251 1.8E-43 T 14-10-2018 C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 Gene3D G3DSA:3.10.50.40 165 374 4.4E-49 T 14-10-2018 C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 Pfam PF13616 PPIC-type PPIASE domain 152 262 1.9E-11 T 14-10-2018 C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 SUPERFAMILY SSF109998 17 189 2.63E-32 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 SUPERFAMILY SSF54534 271 371 3.14E-17 T 14-10-2018 C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 Pfam PF09312 SurA N-terminal domain 17 132 9.4E-30 T 14-10-2018 IPR015391 SurA N-terminal C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 Hamap MF_01183 Chaperone SurA [surA]. 1 412 22.438 T 14-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 Gene3D G3DSA:1.10.4030.10 14 140 5.2E-29 T 14-10-2018 C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 Pfam PF00639 PPIC-type PPIASE domain 292 368 5.0E-10 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 SUPERFAMILY SSF54534 163 263 1.44E-16 T 14-10-2018 C4901_01140 c5ef419f06c0b10f7cea05ace25024f3 413 Gene3D G3DSA:3.10.50.40 272 372 4.4E-49 T 14-10-2018 C4901_09075 e1b3495daa6e8a76118c3e65094d5e24 214 SUPERFAMILY SSF55811 43 208 7.18E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_09075 e1b3495daa6e8a76118c3e65094d5e24 214 ProSitePatterns PS00893 Nudix box signature. 100 121 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C4901_09075 e1b3495daa6e8a76118c3e65094d5e24 214 Pfam PF00293 NUDIX domain 67 188 8.5E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_09075 e1b3495daa6e8a76118c3e65094d5e24 214 Gene3D G3DSA:3.90.79.10 41 214 1.2E-35 T 14-10-2018 C4901_07885 3b2c0bbe2d45117e2e4f3f6281968353 200 SUPERFAMILY SSF56281 21 149 3.12E-6 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_08540 97a1bfb62dd101e0d1e83f1a9c1861d2 370 SUPERFAMILY SSF46785 36 117 5.33E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_08540 97a1bfb62dd101e0d1e83f1a9c1861d2 370 Gene3D G3DSA:1.10.10.10 32 113 7.7E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_08540 97a1bfb62dd101e0d1e83f1a9c1861d2 370 Pfam PF00891 O-methyltransferase 126 351 9.1E-35 T 14-10-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 C4901_08540 97a1bfb62dd101e0d1e83f1a9c1861d2 370 PIRSF PIRSF005739 27 368 2.6E-47 T 14-10-2018 IPR016461 O-methyltransferase COMT-type GO:0008168 C4901_08540 97a1bfb62dd101e0d1e83f1a9c1861d2 370 Gene3D G3DSA:3.40.50.150 114 368 1.5E-59 T 14-10-2018 C4901_08540 97a1bfb62dd101e0d1e83f1a9c1861d2 370 Pfam PF16864 Dimerisation domain 37 112 6.8E-9 T 14-10-2018 IPR031725 Acetylserotonin O-methyltransferase, dimerisation domain C4901_08540 97a1bfb62dd101e0d1e83f1a9c1861d2 370 SUPERFAMILY SSF53335 120 360 3.38E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 Gene3D G3DSA:3.30.70.1560 127 217 1.8E-43 T 14-10-2018 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 Pfam PF01479 S4 domain 4 48 2.2E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 SMART SM00363 3 64 3.5E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 Gene3D G3DSA:3.10.290.10 1 56 3.0E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 228 1.6E-43 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 Pfam PF00849 RNA pseudouridylate synthase 95 197 1.1E-9 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 SUPERFAMILY SSF55174 5 92 1.47E-11 T 14-10-2018 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 Gene3D G3DSA:3.30.70.580 67 225 1.8E-43 T 14-10-2018 C4901_08015 94ab8e2e63ccb1505a76de3d6fa53c67 249 SUPERFAMILY SSF55120 63 228 1.42E-36 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_10305 bff6df36490b47117a6a74be5d95363c 83 Pfam PF03937 Flavinator of succinate dehydrogenase 5 65 3.2E-19 T 14-10-2018 IPR005631 Flavinator of succinate dehydrogenase C4901_10305 bff6df36490b47117a6a74be5d95363c 83 Gene3D G3DSA:1.10.150.250 1 72 2.2E-21 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily C4901_10305 bff6df36490b47117a6a74be5d95363c 83 SUPERFAMILY SSF109910 3 64 5.49E-18 T 14-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily C4901_05175 cf5ca4460f0eab6a2074e59364ac82cb 314 Gene3D G3DSA:3.40.1010.20 6 279 2.0E-107 T 14-10-2018 C4901_05175 cf5ca4460f0eab6a2074e59364ac82cb 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 283 36.54 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C4901_05175 cf5ca4460f0eab6a2074e59364ac82cb 314 Pfam PF02401 LytB protein 3 279 1.1E-88 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C4901_05175 cf5ca4460f0eab6a2074e59364ac82cb 314 Gene3D G3DSA:3.40.1010.20 97 193 2.0E-107 T 14-10-2018 C4901_05175 cf5ca4460f0eab6a2074e59364ac82cb 314 Gene3D G3DSA:3.40.50.11270 12 96 2.0E-107 T 14-10-2018 C4901_05175 cf5ca4460f0eab6a2074e59364ac82cb 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 280 3.0E-98 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 C4901_06430 30f15b2941f5969a1613e0e59f61be63 305 Pfam PF13522 Glutamine amidotransferase domain 148 277 5.5E-20 T 14-10-2018 C4901_06430 30f15b2941f5969a1613e0e59f61be63 305 SUPERFAMILY SSF56235 2 304 1.4E-46 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 Gene3D G3DSA:3.90.180.10 6 364 8.2E-148 T 14-10-2018 C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 SUPERFAMILY SSF51735 160 334 4.08E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 152 1.1E-25 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 Gene3D G3DSA:3.40.50.720 174 312 8.2E-148 T 14-10-2018 C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 SMART SM00829 10 367 3.8E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 SUPERFAMILY SSF50129 1 184 1.25E-69 T 14-10-2018 IPR011032 GroES-like superfamily C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 SUPERFAMILY SSF50129 319 369 3.63E-12 T 14-10-2018 IPR011032 GroES-like superfamily C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 3 369 2.3E-188 T 14-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 Pfam PF00107 Zinc-binding dehydrogenase 197 320 3.8E-24 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C4901_12330 b6433f813fb1bee0604c7af358d97b93 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C4901_04960 16441a360f163c76d439f196f87134fa 482 Gene3D G3DSA:3.30.450.90 94 226 1.1E-50 T 14-10-2018 C4901_04960 16441a360f163c76d439f196f87134fa 482 SUPERFAMILY SSF52540 109 479 1.12E-97 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04960 16441a360f163c76d439f196f87134fa 482 SMART SM00382 254 375 8.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_04960 16441a360f163c76d439f196f87134fa 482 Pfam PF00437 Type II/IV secretion system protein 129 393 2.2E-86 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_04960 16441a360f163c76d439f196f87134fa 482 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 16 479 1.2E-202 T 14-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 C4901_04960 16441a360f163c76d439f196f87134fa 482 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 321 335 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_04960 16441a360f163c76d439f196f87134fa 482 SUPERFAMILY SSF160246 16 79 5.23E-10 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily C4901_04960 16441a360f163c76d439f196f87134fa 482 Gene3D G3DSA:3.40.50.300 227 482 2.1E-105 T 14-10-2018 C4901_04960 16441a360f163c76d439f196f87134fa 482 Gene3D G3DSA:3.30.300.160 1 93 4.3E-10 T 14-10-2018 C4901_12960 7d7e794d10042c96f108690128cf3cba 249 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 109 120 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_12960 7d7e794d10042c96f108690128cf3cba 249 Pfam PF13534 4Fe-4S dicluster domain 62 123 2.1E-9 T 14-10-2018 C4901_12960 7d7e794d10042c96f108690128cf3cba 249 Gene3D G3DSA:1.10.1060.10 41 139 1.5E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_12960 7d7e794d10042c96f108690128cf3cba 249 SUPERFAMILY SSF46548 33 137 2.27E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_08690 12c45ec820c362783d2be1b25753336c 747 SUPERFAMILY SSF50249 639 729 1.94E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_08690 12c45ec820c362783d2be1b25753336c 747 Pfam PF08206 Ribonuclease B OB domain 95 152 2.2E-19 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain C4901_08690 12c45ec820c362783d2be1b25753336c 747 TIGRFAM TIGR02063 RNase_R: ribonuclease R 27 722 3.0E-254 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 C4901_08690 12c45ec820c362783d2be1b25753336c 747 SUPERFAMILY SSF50249 75 155 2.16E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_08690 12c45ec820c362783d2be1b25753336c 747 Pfam PF00773 RNB domain 269 594 6.4E-104 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 C4901_08690 12c45ec820c362783d2be1b25753336c 747 Hamap MF_01895 Ribonuclease R [rnr]. 46 722 55.792 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 C4901_08690 12c45ec820c362783d2be1b25753336c 747 SMART SM00357 94 153 8.3E-12 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C4901_08690 12c45ec820c362783d2be1b25753336c 747 Gene3D G3DSA:2.40.50.140 77 156 3.4E-19 T 14-10-2018 C4901_08690 12c45ec820c362783d2be1b25753336c 747 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 76 722 1.5E-223 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 C4901_08690 12c45ec820c362783d2be1b25753336c 747 SMART SM00316 639 722 5.1E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_08690 12c45ec820c362783d2be1b25753336c 747 SUPERFAMILY SSF50249 196 639 4.0E-139 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_08690 12c45ec820c362783d2be1b25753336c 747 Pfam PF00575 S1 RNA binding domain 638 720 2.1E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 C4901_08690 12c45ec820c362783d2be1b25753336c 747 SMART SM00955 269 596 1.9E-174 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 C4901_08690 12c45ec820c362783d2be1b25753336c 747 Gene3D G3DSA:2.40.50.140 642 744 2.8E-23 T 14-10-2018 C4901_08690 12c45ec820c362783d2be1b25753336c 747 ProSitePatterns PS01175 Ribonuclease II family signature. 563 587 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site C4901_01600 f6c73c95a9138987626765162cbca1e4 397 Pfam PF01566 Natural resistance-associated macrophage protein 19 358 6.3E-62 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 C4901_11910 755af0c8d43a87578b11f297a8729799 238 Gene3D G3DSA:3.90.550.10 2 232 5.3E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_11910 755af0c8d43a87578b11f297a8729799 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 228 6.9E-61 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C4901_11910 755af0c8d43a87578b11f297a8729799 238 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 2.9E-65 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C4901_11910 755af0c8d43a87578b11f297a8729799 238 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 6 228 40.018 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 C4901_11910 755af0c8d43a87578b11f297a8729799 238 SUPERFAMILY SSF53448 7 228 1.52E-52 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 SUPERFAMILY SSF55973 235 384 2.04E-68 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 235 374 6.7E-68 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 3 385 57.068 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 PIRSF PIRSF000497 1 386 1.4E-170 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 Gene3D G3DSA:3.30.300.10 12 272 2.4E-176 T 14-10-2018 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.2E-40 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 SUPERFAMILY SSF55973 116 234 2.43E-52 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 384 4.1E-183 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 261 269 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 Gene3D G3DSA:3.30.300.10 102 377 2.4E-176 T 14-10-2018 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 Gene3D G3DSA:3.30.300.10 6 235 2.4E-176 T 14-10-2018 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 SUPERFAMILY SSF55973 4 110 1.77E-43 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 118 128 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_00775 f5c0c99b79f797610b00fa09157fa918 395 Pfam PF02772 S-adenosylmethionine synthetase, central domain 116 233 3.2E-46 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 SUPERFAMILY SSF56327 158 352 8.82E-19 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 273 352 1.3E-5 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 PIRSF PIRSF000102 1 214 2.6E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 PIRSF PIRSF000102 260 355 1.6E-7 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 Gene3D G3DSA:3.40.50.720 1 151 9.8E-18 T 14-10-2018 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 PRINTS PR00086 L-lactate dehydrogenase signature 128 148 5.4E-10 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 PRINTS PR00086 L-lactate dehydrogenase signature 180 193 5.4E-10 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 PRINTS PR00086 L-lactate dehydrogenase signature 3 27 5.4E-10 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 PRINTS PR00086 L-lactate dehydrogenase signature 150 168 5.4E-10 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 SUPERFAMILY SSF51735 1 152 1.15E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_03575 779219ba48ccf289c036ba99d96fc7e1 356 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 2 152 2.7E-9 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 C4901_10535 50705bc04b65564289111adaf4f21bb1 185 Gene3D G3DSA:3.30.420.10 1 182 7.0E-71 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_10535 50705bc04b65564289111adaf4f21bb1 185 Pfam PF00929 Exonuclease 9 170 2.1E-33 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C4901_10535 50705bc04b65564289111adaf4f21bb1 185 SMART SM00479 7 180 3.6E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C4901_10535 50705bc04b65564289111adaf4f21bb1 185 SUPERFAMILY SSF53098 2 179 6.07E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_10535 50705bc04b65564289111adaf4f21bb1 185 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 42.384 T 14-10-2018 IPR022894 Oligoribonuclease GO:0000175 C4901_10485 4ea0fcc0b0a7c6cc682f086381da1d6f 299 Gene3D G3DSA:3.90.1530.30 23 80 1.6E-5 T 14-10-2018 C4901_10485 4ea0fcc0b0a7c6cc682f086381da1d6f 299 SUPERFAMILY SSF110849 4 96 7.85E-12 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily C4901_10485 4ea0fcc0b0a7c6cc682f086381da1d6f 299 SMART SM00470 8 94 2.0E-5 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C4901_10485 4ea0fcc0b0a7c6cc682f086381da1d6f 299 Pfam PF02195 ParB-like nuclease domain 9 78 1.3E-9 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C4901_10485 4ea0fcc0b0a7c6cc682f086381da1d6f 299 Gene3D G3DSA:1.10.10.2830 86 199 3.6E-9 T 14-10-2018 C4901_10485 4ea0fcc0b0a7c6cc682f086381da1d6f 299 SUPERFAMILY SSF109709 101 186 1.24E-10 T 14-10-2018 C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 62 127 8.0E-20 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 SUPERFAMILY SSF48300 4 63 8.89E-14 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 Gene3D G3DSA:1.20.5.710 3 56 1.5E-18 T 14-10-2018 C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 SUPERFAMILY SSF54736 57 127 8.89E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 54 2.3E-18 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 127 1.8E-44 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 61 127 5.5E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 Gene3D G3DSA:3.30.1390.10 57 127 1.3E-29 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C4901_14165 a08f282dcf7a4fcc7beb6fb709ad6f66 127 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 127 24.447 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 Pfam PF02811 PHP domain 6 169 2.0E-41 T 14-10-2018 IPR004013 PHP domain GO:0003824 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 SUPERFAMILY SSF50249 964 1050 1.58E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 Pfam PF14579 Helix-hairpin-helix motif 799 887 6.0E-25 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 Gene3D G3DSA:2.40.50.140 961 1062 7.4E-8 T 14-10-2018 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 Gene3D G3DSA:1.10.10.1600 429 506 2.8E-32 T 14-10-2018 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 Gene3D G3DSA:1.10.150.870 768 875 1.8E-5 T 14-10-2018 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 294 725 1.9E-173 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 SUPERFAMILY SSF89550 4 260 5.49E-16 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 Gene3D G3DSA:3.20.20.140 1 267 2.1E-90 T 14-10-2018 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 Pfam PF01336 OB-fold nucleic acid binding domain 982 1054 2.8E-10 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1015 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_10365 e8380c7391142d959f1c46a23a6a38b2 1146 SMART SM00481 5 72 2.4E-19 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 616 5.6E-257 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 271 285 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 366 389 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 SUPERFAMILY SSF51905 5 259 2.63E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 Pfam PF13932 GidA associated domain 401 611 5.2E-69 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 Pfam PF01134 Glucose inhibited division protein A 8 394 2.7E-162 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 619 41.485 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 Gene3D G3DSA:1.10.150.570 565 616 2.8E-23 T 14-10-2018 C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 Gene3D G3DSA:3.50.50.60 309 456 4.5E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 Gene3D G3DSA:3.50.50.60 2 222 3.1E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 SMART SM01228 541 612 1.2E-40 T 14-10-2018 C4901_17055 ae9c2dabe099c31fd53ff3313f7b1bde 619 Gene3D G3DSA:1.10.10.1800 457 545 1.8E-17 T 14-10-2018 C4901_07565 61844329560a8379d436962c1f32d87c 205 Pfam PF01610 Transposase 10 181 1.0E-46 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_16525 be885197f872f144995adedc29eed850 232 Pfam PF01987 Mitochondrial biogenesis AIM24 21 223 3.4E-26 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 C4901_16525 be885197f872f144995adedc29eed850 232 SUPERFAMILY SSF51219 20 227 8.37E-31 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily C4901_16525 be885197f872f144995adedc29eed850 232 Gene3D G3DSA:3.60.160.10 14 232 4.5E-32 T 14-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily C4901_14015 1d49c3d70d506fd9e4c16a9607f3d090 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 28.005 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14015 1d49c3d70d506fd9e4c16a9607f3d090 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14015 1d49c3d70d506fd9e4c16a9607f3d090 118 Gene3D G3DSA:1.10.8.50 1 71 8.1E-29 T 14-10-2018 C4901_14015 1d49c3d70d506fd9e4c16a9607f3d090 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.5E-53 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14015 1d49c3d70d506fd9e4c16a9607f3d090 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 6.3E-33 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14015 1d49c3d70d506fd9e4c16a9607f3d090 118 PIRSF PIRSF002134 1 118 1.2E-44 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14015 1d49c3d70d506fd9e4c16a9607f3d090 118 SUPERFAMILY SSF46946 2 114 4.51E-47 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 C4901_14015 1d49c3d70d506fd9e4c16a9607f3d090 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 242 305 3.7E-24 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 225 9.3E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 323 1.0E-29 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 SUPERFAMILY SSF47789 247 322 4.71E-25 T 14-10-2018 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 Gene3D G3DSA:1.10.150.20 241 326 1.1E-35 T 14-10-2018 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 SUPERFAMILY SSF55257 7 230 1.73E-30 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 313 1.1E-110 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 314 34.681 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 SMART SM00662 23 231 4.9E-93 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 Gene3D G3DSA:2.170.120.12 53 174 3.9E-81 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 Gene3D G3DSA:3.30.1360.10 20 225 3.9E-81 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 SUPERFAMILY SSF56553 53 175 6.02E-38 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_14000 1851beec284ec8568ebbd923915cf70e 334 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 153 3.9E-22 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_06615 d49bb61f37a8f4cb642c2754ee4cad62 95 Pfam PF01610 Transposase 1 66 8.5E-15 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 Pfam PF00990 Diguanylate cyclase, GGDEF domain 12 155 2.9E-29 T 14-10-2018 IPR000160 GGDEF domain C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 Gene3D G3DSA:3.30.70.270 11 164 9.0E-39 T 14-10-2018 C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 Pfam PF00563 EAL domain 172 410 1.2E-55 T 14-10-2018 IPR001633 EAL domain C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 SUPERFAMILY SSF141868 172 411 4.58E-59 T 14-10-2018 IPR035919 EAL domain superfamily C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 18 157 1.5E-27 T 14-10-2018 IPR000160 GGDEF domain C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 SMART SM00267 3 159 2.7E-30 T 14-10-2018 IPR000160 GGDEF domain C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 SUPERFAMILY SSF55073 13 157 4.79E-34 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 SMART SM00052 165 418 6.5E-45 T 14-10-2018 IPR001633 EAL domain C4901_07935 f21819e3eeaaaa1c40f0d22da5478f0f 422 Gene3D G3DSA:3.20.20.450 165 421 5.9E-67 T 14-10-2018 IPR035919 EAL domain superfamily C4901_14825 25c011d4e8aa3f758c232ac97ffa8cb3 432 Pfam PF01494 FAD binding domain 6 193 1.1E-8 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C4901_14825 25c011d4e8aa3f758c232ac97ffa8cb3 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.4E-6 T 14-10-2018 C4901_14825 25c011d4e8aa3f758c232ac97ffa8cb3 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 153 168 1.4E-6 T 14-10-2018 C4901_14825 25c011d4e8aa3f758c232ac97ffa8cb3 432 Gene3D G3DSA:3.50.50.60 1 417 2.7E-63 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_14825 25c011d4e8aa3f758c232ac97ffa8cb3 432 SUPERFAMILY SSF54373 182 284 1.8E-23 T 14-10-2018 C4901_14825 25c011d4e8aa3f758c232ac97ffa8cb3 432 SUPERFAMILY SSF51905 1 378 2.78E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_08400 0dd66aaa0c1005acee62f6df7f4a5979 179 SUPERFAMILY SSF103247 44 150 2.35E-9 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_08400 0dd66aaa0c1005acee62f6df7f4a5979 179 Gene3D G3DSA:3.30.310.70 45 166 1.4E-5 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_08400 0dd66aaa0c1005acee62f6df7f4a5979 179 Pfam PF03625 Domain of unknown function DUF302 98 143 8.1E-6 T 14-10-2018 IPR005180 Domain of unknown function DUF302 C4901_06420 ee9589de45f8e38dae6fbcea0e0c8378 453 PIRSF PIRSF500061 2 451 1.3E-158 T 14-10-2018 C4901_06420 ee9589de45f8e38dae6fbcea0e0c8378 453 Gene3D G3DSA:3.20.20.70 63 443 2.1E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_06420 ee9589de45f8e38dae6fbcea0e0c8378 453 SUPERFAMILY SSF51395 26 434 1.65E-96 T 14-10-2018 C4901_06420 ee9589de45f8e38dae6fbcea0e0c8378 453 PIRSF PIRSF006429 2 453 2.0E-143 T 14-10-2018 IPR024188 Glutamate synthase large subunit-like protein C4901_06420 ee9589de45f8e38dae6fbcea0e0c8378 453 Pfam PF01645 Conserved region in glutamate synthase 85 337 7.4E-79 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 C4901_06420 ee9589de45f8e38dae6fbcea0e0c8378 453 Pfam PF01645 Conserved region in glutamate synthase 363 416 1.3E-9 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 C4901_07485 306a7442403117016821ed54a62a4c97 92 Gene3D G3DSA:3.30.2310.20 1 92 4.7E-26 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_07485 306a7442403117016821ed54a62a4c97 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 92 2.3E-22 T 14-10-2018 IPR007711 Toxin HigB-1 C4901_07485 306a7442403117016821ed54a62a4c97 92 SUPERFAMILY SSF143011 1 92 3.14E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_00885 e38c14d9291164ce2bca8b54789335c6 158 Pfam PF00583 Acetyltransferase (GNAT) family 45 141 8.9E-13 T 14-10-2018 IPR000182 GNAT domain C4901_00885 e38c14d9291164ce2bca8b54789335c6 158 Gene3D G3DSA:3.40.630.30 8 147 5.3E-25 T 14-10-2018 C4901_00885 e38c14d9291164ce2bca8b54789335c6 158 SUPERFAMILY SSF55729 9 145 2.99E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_11305 c717bcfa8e6a3330509a4587093f5dc6 171 Pfam PF04608 Phosphatidylglycerophosphatase A 26 160 6.8E-42 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 C4901_11305 c717bcfa8e6a3330509a4587093f5dc6 171 SUPERFAMILY SSF101307 19 161 2.35E-31 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 C4901_11305 c717bcfa8e6a3330509a4587093f5dc6 171 PIRSF PIRSF006162 14 169 1.5E-39 T 14-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 Pfam PF01256 Carbohydrate kinase 226 442 5.8E-46 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 Gene3D G3DSA:3.40.50.10260 86 193 7.2E-23 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 Pfam PF03853 YjeF-related protein N-terminus 99 168 1.6E-12 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 PIRSF PIRSF017184 88 467 1.8E-89 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 PIRSF PIRSF017184 23 94 0.14 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 202 464 20.199 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 Gene3D G3DSA:3.40.1190.20 197 465 9.3E-75 T 14-10-2018 IPR029056 Ribokinase-like C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 208 462 2.2E-51 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 SUPERFAMILY SSF53613 204 463 1.46E-63 T 14-10-2018 IPR029056 Ribokinase-like C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 403 413 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site C4901_10530 a0e07efc7f5f9d7ef0a665497c478eca 467 SUPERFAMILY SSF64153 37 190 7.72E-28 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 C4901_03370 53025604e8f7fd4880c9d3c9dcd92c02 574 Pfam PF03717 Penicillin-binding Protein dimerisation domain 63 209 5.9E-11 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 C4901_03370 53025604e8f7fd4880c9d3c9dcd92c02 574 SUPERFAMILY SSF56601 177 563 1.09E-81 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C4901_03370 53025604e8f7fd4880c9d3c9dcd92c02 574 Gene3D G3DSA:3.40.710.10 287 470 1.3E-104 T 14-10-2018 C4901_03370 53025604e8f7fd4880c9d3c9dcd92c02 574 Pfam PF00905 Penicillin binding protein transpeptidase domain 251 548 5.3E-66 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C4901_03370 53025604e8f7fd4880c9d3c9dcd92c02 574 SUPERFAMILY SSF56519 59 225 1.02E-36 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 C4901_03370 53025604e8f7fd4880c9d3c9dcd92c02 574 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 14 564 38.495 T 14-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_03370 53025604e8f7fd4880c9d3c9dcd92c02 574 Gene3D G3DSA:3.30.450.330 227 553 1.3E-104 T 14-10-2018 C4901_03370 53025604e8f7fd4880c9d3c9dcd92c02 574 Gene3D G3DSA:3.90.1310.30 55 226 1.5E-38 T 14-10-2018 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 PRINTS PR01011 Glutathione peroxidase family signature 29 46 2.3E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 PRINTS PR01011 Glutathione peroxidase family signature 64 80 2.3E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 PRINTS PR01011 Glutathione peroxidase family signature 130 139 2.3E-20 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 PIRSF PIRSF000303 4 169 4.8E-61 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 Pfam PF00255 Glutathione peroxidase 11 117 1.5E-41 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 ProSitePatterns PS00460 Glutathione peroxidases active site. 31 46 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 Gene3D G3DSA:3.40.30.10 8 169 5.9E-63 T 14-10-2018 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 67 74 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 C4901_05340 54b7f93f01c3ca2b6246515225b63682 169 SUPERFAMILY SSF52833 10 166 3.87E-57 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_14050 97674099d4027a23423be19d5fab24e5 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14050 97674099d4027a23423be19d5fab24e5 177 SUPERFAMILY SSF56053 83 177 4.03E-36 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14050 97674099d4027a23423be19d5fab24e5 177 Pfam PF00347 Ribosomal protein L6 90 164 1.1E-20 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14050 97674099d4027a23423be19d5fab24e5 177 Pfam PF00347 Ribosomal protein L6 12 82 6.6E-15 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14050 97674099d4027a23423be19d5fab24e5 177 Gene3D G3DSA:3.90.930.12 1 82 1.9E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14050 97674099d4027a23423be19d5fab24e5 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.1E-73 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C4901_14050 97674099d4027a23423be19d5fab24e5 177 PIRSF PIRSF002162 1 177 1.2E-40 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14050 97674099d4027a23423be19d5fab24e5 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.1E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C4901_14050 97674099d4027a23423be19d5fab24e5 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.1E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C4901_14050 97674099d4027a23423be19d5fab24e5 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.1E-34 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C4901_14050 97674099d4027a23423be19d5fab24e5 177 Gene3D G3DSA:3.90.930.12 83 177 4.5E-40 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14050 97674099d4027a23423be19d5fab24e5 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.088 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 C4901_14050 97674099d4027a23423be19d5fab24e5 177 SUPERFAMILY SSF56053 1 82 5.76E-22 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_03105 cbaba4a072960b0661066453bf139ae8 99 Pfam PF13466 STAS domain 37 91 5.8E-12 T 14-10-2018 IPR002645 STAS domain C4901_03105 cbaba4a072960b0661066453bf139ae8 99 Gene3D G3DSA:3.30.750.24 4 99 1.9E-9 T 14-10-2018 IPR036513 STAS domain superfamily C4901_03105 cbaba4a072960b0661066453bf139ae8 99 SUPERFAMILY SSF52091 41 96 3.34E-9 T 14-10-2018 IPR036513 STAS domain superfamily C4901_16410 2185fa7772837e00f990bd535ed2c8d1 282 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 82 95 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 C4901_16410 2185fa7772837e00f990bd535ed2c8d1 282 Pfam PF17284 Spermidine synthase tetramerisation domain 5 57 1.2E-16 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 C4901_16410 2185fa7772837e00f990bd535ed2c8d1 282 Gene3D G3DSA:2.30.140.10 3 57 3.7E-21 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 C4901_16410 2185fa7772837e00f990bd535ed2c8d1 282 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 5 282 36.792 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 C4901_16410 2185fa7772837e00f990bd535ed2c8d1 282 SUPERFAMILY SSF53335 6 280 3.88E-79 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_16410 2185fa7772837e00f990bd535ed2c8d1 282 TIGRFAM TIGR00417 speE: spermidine synthase 6 276 1.4E-86 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 C4901_16410 2185fa7772837e00f990bd535ed2c8d1 282 Pfam PF01564 Spermine/spermidine synthase domain 62 241 2.9E-50 T 14-10-2018 C4901_16410 2185fa7772837e00f990bd535ed2c8d1 282 Gene3D G3DSA:3.40.50.150 58 281 6.6E-68 T 14-10-2018 C4901_16185 67d054881d10836a7d7b771b8c60b1e4 211 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 10 201 8.9E-104 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 C4901_16185 67d054881d10836a7d7b771b8c60b1e4 211 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 12 182 1.3E-36 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain C4901_16185 67d054881d10836a7d7b771b8c60b1e4 211 SUPERFAMILY SSF52540 4 201 5.76E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16185 67d054881d10836a7d7b771b8c60b1e4 211 Hamap MF_01389 Urease accessory protein UreG [ureG]. 8 206 47.87 T 14-10-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 C4901_16185 67d054881d10836a7d7b771b8c60b1e4 211 Gene3D G3DSA:3.40.50.300 10 203 1.0E-49 T 14-10-2018 C4901_16185 67d054881d10836a7d7b771b8c60b1e4 211 PIRSF PIRSF005624 2 209 2.9E-49 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 SUPERFAMILY SSF63882 8 177 1.09E-49 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 Gene3D G3DSA:2.170.190.11 52 142 2.7E-134 T 14-10-2018 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 255 288 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 Gene3D G3DSA:3.90.105.10 29 175 2.7E-134 T 14-10-2018 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 SUPERFAMILY SSF63867 330 405 2.62E-16 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 Gene3D G3DSA:2.40.340.10 330 398 2.7E-134 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 168 1.1E-44 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 Pfam PF03454 MoeA C-terminal region (domain IV) 333 403 2.4E-15 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_16545 be748f3de091b5eec25436bf8851dd63 408 SUPERFAMILY SSF53218 178 323 1.44E-42 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C4901_16545 be748f3de091b5eec25436bf8851dd63 408 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 178 315 1.1E-31 T 14-10-2018 IPR001453 MoaB/Mog domain C4901_16545 be748f3de091b5eec25436bf8851dd63 408 Pfam PF00994 Probable molybdopterin binding domain 182 318 3.4E-28 T 14-10-2018 IPR001453 MoaB/Mog domain C4901_16545 be748f3de091b5eec25436bf8851dd63 408 Gene3D G3DSA:3.40.980.10 176 329 2.7E-134 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily C4901_16545 be748f3de091b5eec25436bf8851dd63 408 SMART SM00852 181 319 1.0E-44 T 14-10-2018 IPR001453 MoaB/Mog domain C4901_12315 4e5eff6e7b6d43be68a08050bd14d557 216 PIRSF PIRSF006755 1 215 2.1E-57 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C4901_12315 4e5eff6e7b6d43be68a08050bd14d557 216 Gene3D G3DSA:3.40.50.300 1 213 5.7E-57 T 14-10-2018 C4901_12315 4e5eff6e7b6d43be68a08050bd14d557 216 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 202 27.057 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C4901_12315 4e5eff6e7b6d43be68a08050bd14d557 216 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 170 1.5E-44 T 14-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 C4901_12315 4e5eff6e7b6d43be68a08050bd14d557 216 Pfam PF13500 AAA domain 3 204 2.8E-41 T 14-10-2018 C4901_12315 4e5eff6e7b6d43be68a08050bd14d557 216 SUPERFAMILY SSF52540 1 204 1.98E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16555 4aa72f140bbf159f9f8ce33b887d6784 323 Pfam PF01936 NYN domain 68 195 2.3E-13 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type C4901_16555 4aa72f140bbf159f9f8ce33b887d6784 323 Gene3D G3DSA:3.40.50.1010 85 205 1.1E-7 T 14-10-2018 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 Gene3D G3DSA:3.30.390.10 1 126 1.5E-48 T 14-10-2018 IPR029017 Enolase-like, N-terminal C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 SMART SM01192 138 425 2.6E-196 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 PIRSF PIRSF001400 1 424 1.9E-176 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 SUPERFAMILY SSF51604 138 419 9.04E-118 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 ProSitePatterns PS00164 Enolase signature. 334 347 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 418 5.3E-190 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 SMART SM01193 4 133 6.0E-78 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 Pfam PF00113 Enolase, C-terminal TIM barrel domain 139 420 1.8E-120 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 Hamap MF_00318 Enolase [eno]. 2 411 43.074 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 Pfam PF03952 Enolase, N-terminal domain 4 133 1.5E-52 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 PRINTS PR00148 Enolase signature 37 51 1.5E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 PRINTS PR00148 Enolase signature 160 173 1.5E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 PRINTS PR00148 Enolase signature 363 380 1.5E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 PRINTS PR00148 Enolase signature 106 122 1.5E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 PRINTS PR00148 Enolase signature 334 348 1.5E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 PRINTS PR00148 Enolase signature 311 322 1.5E-41 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 SUPERFAMILY SSF54826 3 135 7.91E-49 T 14-10-2018 C4901_10340 746ba916b349f61f6584e5d9b91332b1 428 Gene3D G3DSA:3.20.20.120 127 427 6.8E-127 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C4901_11955 a401a447d884276ea0e381fee8dc24df 289 Pfam PF00483 Nucleotidyl transferase 11 268 1.3E-28 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C4901_11955 a401a447d884276ea0e381fee8dc24df 289 Gene3D G3DSA:3.90.550.10 1 288 1.9E-89 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_11955 a401a447d884276ea0e381fee8dc24df 289 SUPERFAMILY SSF53448 6 277 2.16E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_11955 a401a447d884276ea0e381fee8dc24df 289 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 265 3.4E-113 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 C4901_15455 362961d6f9513da31758f5c9d43b84ab 453 Gene3D G3DSA:3.40.50.300 114 391 1.6E-48 T 14-10-2018 C4901_15455 362961d6f9513da31758f5c9d43b84ab 453 Pfam PF13481 AAA domain 140 307 3.4E-31 T 14-10-2018 C4901_15455 362961d6f9513da31758f5c9d43b84ab 453 SUPERFAMILY SSF52540 139 361 2.03E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03305 a08aa717094613cc89682d713d852b57 416 PIRSF PIRSF038885 1 416 2.3E-131 T 14-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 C4901_03305 a08aa717094613cc89682d713d852b57 416 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 279 306 1.6E-5 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C4901_03305 a08aa717094613cc89682d713d852b57 416 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 308 391 4.0E-23 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C4901_03305 a08aa717094613cc89682d713d852b57 416 SUPERFAMILY SSF81342 14 268 8.63E-80 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C4901_03305 a08aa717094613cc89682d713d852b57 416 SUPERFAMILY SSF81648 309 404 1.11E-20 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C4901_03305 a08aa717094613cc89682d713d852b57 416 Pfam PF00033 Cytochrome b/b6/petB 24 212 6.9E-57 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 C4901_03305 a08aa717094613cc89682d713d852b57 416 Gene3D G3DSA:1.20.810.10 1 416 6.7E-132 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 C4901_03170 85bcde79d682c68f5345c5a550db472a 141 Gene3D G3DSA:3.10.20.400 6 97 3.4E-38 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 C4901_03170 85bcde79d682c68f5345c5a550db472a 141 SUPERFAMILY SSF141734 6 120 1.31E-46 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 C4901_03170 85bcde79d682c68f5345c5a550db472a 141 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 32 106 6.0E-34 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C4901_03170 85bcde79d682c68f5345c5a550db472a 141 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 55 106 6.0E-20 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C4901_03170 85bcde79d682c68f5345c5a550db472a 141 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 6 110 31.72 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 C4901_10965 40d7a219308d2d0263585b4ce50991ae 927 SUPERFAMILY SSF53335 168 609 1.48E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_10965 40d7a219308d2d0263585b4ce50991ae 927 Gene3D G3DSA:3.40.50.150 279 615 4.6E-24 T 14-10-2018 C4901_12400 82bc219a28ccbce40132eacdfa43abe9 144 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 11 109 7.4E-39 T 14-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_12400 82bc219a28ccbce40132eacdfa43abe9 144 SUPERFAMILY SSF55239 7 144 1.96E-54 T 14-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_12400 82bc219a28ccbce40132eacdfa43abe9 144 SMART SM00961 10 109 5.4E-52 T 14-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_12400 82bc219a28ccbce40132eacdfa43abe9 144 Gene3D G3DSA:3.30.190.10 7 144 9.1E-54 T 14-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 Gene3D G3DSA:3.40.50.620 212 408 1.7E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 PRINTS PR00097 Anthranilate synthase component II signature 180 193 7.8E-5 T 14-10-2018 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 PRINTS PR00097 Anthranilate synthase component II signature 86 97 7.8E-5 T 14-10-2018 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 PRINTS PR00096 Glutamine amidotransferase superfamily signature 180 193 3.9E-6 T 14-10-2018 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 PRINTS PR00096 Glutamine amidotransferase superfamily signature 86 97 3.9E-6 T 14-10-2018 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 PRINTS PR00096 Glutamine amidotransferase superfamily signature 59 68 3.9E-6 T 14-10-2018 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 SUPERFAMILY SSF52317 14 211 4.06E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 Pfam PF00117 Glutamine amidotransferase class-I 17 201 3.8E-33 T 14-10-2018 IPR017926 Glutamine amidotransferase C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 Gene3D G3DSA:3.30.300.10 409 528 5.3E-51 T 14-10-2018 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 12 528 54.535 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 SUPERFAMILY SSF52402 200 423 2.05E-53 T 14-10-2018 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 15 207 1.8E-72 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 216 528 1.2E-145 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 Pfam PF00958 GMP synthase C terminal domain 436 527 2.2E-42 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 SUPERFAMILY SSF54810 408 528 2.09E-49 T 14-10-2018 C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 Pfam PF02540 NAD synthase 226 292 4.2E-6 T 14-10-2018 IPR022310 NAD/GMP synthase C4901_10765 3c0c6f5d0750691c42aa79f92d5ab3be 528 Gene3D G3DSA:3.40.50.880 14 208 2.2E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 299 353 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 167 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 449 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 420 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 185 197 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 235 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 388 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 358 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 116 139 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 265 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 318 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 PRINTS PR01165 Cytochrome c oxidase subunit I signature 479 500 3.7E-70 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 Gene3D G3DSA:1.20.210.10 41 584 6.3E-154 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 SUPERFAMILY SSF81442 54 577 3.4E-141 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00180 1f171e18f71ee0ab6a1e78c9efcb7c1f 726 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 518 2.0E-112 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 SUPERFAMILY SSF46785 6 90 2.59E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 SUPERFAMILY SSF53850 92 216 2.9E-15 T 14-10-2018 C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 Gene3D G3DSA:3.40.190.10 168 222 1.4E-17 T 14-10-2018 C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 Gene3D G3DSA:1.10.10.10 6 96 2.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 Gene3D G3DSA:3.40.190.10 97 167 1.4E-17 T 14-10-2018 C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 Pfam PF03466 LysR substrate binding domain 91 216 7.6E-16 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 5.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 5.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 5.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_08585 8b0c4a63a304a7bd6bba95019d1d3bb0 230 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.3E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_12755 24079589b313fc5465f60940507d0513 461 SUPERFAMILY SSF52374 5 300 1.6E-81 T 14-10-2018 C4901_12755 24079589b313fc5465f60940507d0513 461 Gene3D G3DSA:3.40.50.620 1 320 3.1E-97 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_12755 24079589b313fc5465f60940507d0513 461 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 6 450 1.9E-91 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C4901_12755 24079589b313fc5465f60940507d0513 461 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 311 3.1E-62 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C4901_12755 24079589b313fc5465f60940507d0513 461 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_12755 24079589b313fc5465f60940507d0513 461 SUPERFAMILY SSF48163 307 450 2.75E-17 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C4901_12755 24079589b313fc5465f60940507d0513 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 2.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_12755 24079589b313fc5465f60940507d0513 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 187 197 2.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_12755 24079589b313fc5465f60940507d0513 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 2.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_12755 24079589b313fc5465f60940507d0513 461 PRINTS PR00987 Glutamyl-tRNA synthetase signature 203 211 2.9E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_12755 24079589b313fc5465f60940507d0513 461 Gene3D G3DSA:1.10.10.350 388 453 2.6E-8 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C4901_03840 4ff941aceeb836880ea8620e1600d9cd 507 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 191 494 1.1E-94 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 C4901_03840 4ff941aceeb836880ea8620e1600d9cd 507 PRINTS PR00481 Cytosol aminopeptidase signature 289 310 5.0E-40 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_03840 4ff941aceeb836880ea8620e1600d9cd 507 PRINTS PR00481 Cytosol aminopeptidase signature 348 368 5.0E-40 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_03840 4ff941aceeb836880ea8620e1600d9cd 507 PRINTS PR00481 Cytosol aminopeptidase signature 376 391 5.0E-40 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_03840 4ff941aceeb836880ea8620e1600d9cd 507 PRINTS PR00481 Cytosol aminopeptidase signature 326 347 5.0E-40 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_03840 4ff941aceeb836880ea8620e1600d9cd 507 PRINTS PR00481 Cytosol aminopeptidase signature 267 284 5.0E-40 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 C4901_03840 4ff941aceeb836880ea8620e1600d9cd 507 SUPERFAMILY SSF53187 186 501 9.42E-93 T 14-10-2018 C4901_03840 4ff941aceeb836880ea8620e1600d9cd 507 Gene3D G3DSA:3.40.630.10 176 504 2.9E-104 T 14-10-2018 C4901_13300 1a994c5d90c360f7cb773d0ed639ca2a 250 Gene3D G3DSA:3.30.1150.10 123 246 2.4E-12 T 14-10-2018 C4901_13300 1a994c5d90c360f7cb773d0ed639ca2a 250 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 172 244 5.8E-10 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C4901_13300 1a994c5d90c360f7cb773d0ed639ca2a 250 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 174 244 8.8E-9 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 C4901_13300 1a994c5d90c360f7cb773d0ed639ca2a 250 SUPERFAMILY SSF74653 146 239 9.81E-10 T 14-10-2018 C4901_00040 857cbe0f7dd4fc17638edeebba33d67b 262 SUPERFAMILY SSF110399 6 248 7.72E-88 T 14-10-2018 C4901_00040 857cbe0f7dd4fc17638edeebba33d67b 262 Hamap MF_00443 Thiazole synthase [thiG]. 7 262 43.076 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 C4901_00040 857cbe0f7dd4fc17638edeebba33d67b 262 Gene3D G3DSA:3.20.20.70 1 262 7.7E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_00040 857cbe0f7dd4fc17638edeebba33d67b 262 Pfam PF05690 Thiazole biosynthesis protein ThiG 10 256 1.1E-111 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 C4901_16190 f85c9712f4fd11857c264e71091e13b1 228 Gene3D G3DSA:1.10.4190.10 8 207 2.6E-51 T 14-10-2018 IPR038277 UreF domain superfamily C4901_16190 f85c9712f4fd11857c264e71091e13b1 228 PIRSF PIRSF009467 9 228 4.5E-59 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 C4901_16190 f85c9712f4fd11857c264e71091e13b1 228 Pfam PF01730 UreF 44 185 2.3E-34 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 C4901_16190 f85c9712f4fd11857c264e71091e13b1 228 Hamap MF_01385 Urease accessory protein UreF [ureF]. 11 228 30.692 T 14-10-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 C4901_09600 9b78917e5f3b3c86231a0d98d05e8678 409 Pfam PF00155 Aminotransferase class I and II 31 390 1.1E-39 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C4901_09600 9b78917e5f3b3c86231a0d98d05e8678 409 Gene3D G3DSA:3.90.1150.10 13 385 3.6E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_09600 9b78917e5f3b3c86231a0d98d05e8678 409 SUPERFAMILY SSF53383 2 396 9.9E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_09600 9b78917e5f3b3c86231a0d98d05e8678 409 Gene3D G3DSA:3.40.640.10 42 292 3.6E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_09600 9b78917e5f3b3c86231a0d98d05e8678 409 TIGRFAM TIGR03538 DapC_gpp: succinyldiaminopimelate transaminase 1 394 1.8E-156 T 14-10-2018 IPR019878 Succinyldiaminopimelate transaminase, DapC, beta/gammaproteobacteria GO:0009016|GO:0009089 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 SUPERFAMILY SSF55424 378 493 1.07E-22 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 174 183 3.9E-45 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 312 3.9E-45 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 377 398 3.9E-45 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 442 457 3.9E-45 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 65 3.9E-45 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 211 236 3.9E-45 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 75 90 3.9E-45 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 341 348 3.9E-45 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 Gene3D G3DSA:3.50.50.60 42 367 3.8E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 Gene3D G3DSA:3.30.390.30 381 499 8.0E-19 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 42 361 3.6E-54 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 381 487 7.1E-12 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 Gene3D G3DSA:3.50.50.60 190 311 3.8E-87 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 SUPERFAMILY SSF51905 37 369 2.46E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PIRSF PIRSF000350 14 477 3.2E-56 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 229 7.8E-32 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 326 348 7.8E-32 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 44 63 7.8E-32 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 7.8E-32 T 14-10-2018 C4901_06830 bb7fb00a0510e9d8a7701f2ed946c089 514 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 313 7.8E-32 T 14-10-2018 C4901_07540 bd28fbfc8a78bf36981754572ee68e22 346 Pfam PF00005 ABC transporter 46 190 4.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_07540 bd28fbfc8a78bf36981754572ee68e22 346 SUPERFAMILY SSF52540 39 262 4.6E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07540 bd28fbfc8a78bf36981754572ee68e22 346 SMART SM00382 55 247 1.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_07540 bd28fbfc8a78bf36981754572ee68e22 346 Gene3D G3DSA:3.40.50.300 32 277 1.3E-57 T 14-10-2018 C4901_03820 4f8934300faa87d7cc801858566bb189 549 SUPERFAMILY SSF52540 2 239 7.95E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03820 4f8934300faa87d7cc801858566bb189 549 Gene3D G3DSA:3.40.50.300 282 549 2.0E-68 T 14-10-2018 C4901_03820 4f8934300faa87d7cc801858566bb189 549 Pfam PF00005 ABC transporter 335 468 6.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_03820 4f8934300faa87d7cc801858566bb189 549 SUPERFAMILY SSF52540 297 518 5.99E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03820 4f8934300faa87d7cc801858566bb189 549 Pfam PF00005 ABC transporter 15 186 2.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_03820 4f8934300faa87d7cc801858566bb189 549 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_03820 4f8934300faa87d7cc801858566bb189 549 Gene3D G3DSA:3.40.50.300 1 280 7.2E-79 T 14-10-2018 C4901_03820 4f8934300faa87d7cc801858566bb189 549 Pfam PF12848 ABC transporter 225 298 6.4E-12 T 14-10-2018 IPR032781 ABC-transporter extension domain C4901_03820 4f8934300faa87d7cc801858566bb189 549 SMART SM00382 343 521 8.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03820 4f8934300faa87d7cc801858566bb189 549 SMART SM00382 24 227 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03820 4f8934300faa87d7cc801858566bb189 549 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 1 548 3.6E-287 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 SUPERFAMILY SSF53927 208 515 3.01E-120 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 SMART SM00851 13 128 2.9E-47 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 PIRSF PIRSF000414 1 515 2.0E-206 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 SMART SM00798 133 447 2.6E-179 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 Gene3D G3DSA:3.40.50.1380 1 196 3.6E-78 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 515 6.3E-205 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 515 42.992 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 SUPERFAMILY SSF52335 2 191 2.93E-62 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 446 3.3E-108 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 Gene3D G3DSA:3.40.140.20 380 515 2.8E-56 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 Gene3D G3DSA:3.40.140.20 205 361 9.6E-55 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_00505 cb5da434e3b469abc3a43d5648ece5e8 516 Pfam PF02142 MGS-like domain 13 127 1.9E-22 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain C4901_07410 048d2543b595079d0e4fada32a2f2b22 153 SUPERFAMILY SSF53955 3 144 1.74E-36 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C4901_07410 048d2543b595079d0e4fada32a2f2b22 153 Pfam PF00959 Phage lysozyme 31 133 9.0E-9 T 14-10-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 C4901_07410 048d2543b595079d0e4fada32a2f2b22 153 Gene3D G3DSA:1.10.530.40 9 148 1.3E-40 T 14-10-2018 C4901_02565 3c71b126666047c2c587ae6938bff385 165 Pfam PF13560 Helix-turn-helix domain 21 77 1.9E-12 T 14-10-2018 C4901_02565 3c71b126666047c2c587ae6938bff385 165 SMART SM00530 24 79 2.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_02565 3c71b126666047c2c587ae6938bff385 165 SUPERFAMILY SSF47413 19 82 2.33E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_02565 3c71b126666047c2c587ae6938bff385 165 Gene3D G3DSA:1.10.260.40 14 84 9.6E-15 T 14-10-2018 C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 SUPERFAMILY SSF52374 16 175 1.31E-28 T 14-10-2018 C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 Pfam PF06574 FAD synthetase 13 167 3.4E-47 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 Pfam PF01687 Riboflavin kinase 185 304 1.1E-31 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 305 1.6E-84 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 SUPERFAMILY SSF82114 174 307 3.92E-41 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 SMART SM00904 183 306 1.7E-49 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 Gene3D G3DSA:2.40.30.30 188 310 1.7E-37 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 Gene3D G3DSA:3.40.50.620 1 186 2.2E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_05155 711edbce2ba03fe764ad9cf703dd6b14 313 PIRSF PIRSF004491 1 310 7.4E-92 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 Gene3D G3DSA:3.30.390.30 338 455 3.1E-24 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 318 1.3E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 3.1E-30 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 3.1E-30 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 3.1E-30 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.1E-30 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 170 188 3.1E-30 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 Gene3D G3DSA:3.50.50.60 4 323 1.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 1.8E-55 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 399 414 1.8E-55 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 133 142 1.8E-55 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 170 195 1.8E-55 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 1.8E-55 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.8E-55 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 334 355 1.8E-55 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 36 51 1.8E-55 T 14-10-2018 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 SUPERFAMILY SSF55424 334 449 1.89E-22 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 PIRSF PIRSF000350 1 424 1.1E-71 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 Gene3D G3DSA:3.50.50.60 142 261 1.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 37 47 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 338 445 1.4E-19 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 C4901_02900 bdb0ac98ae57055d00744a1161ccce4e 468 SUPERFAMILY SSF51905 1 366 6.48E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_07270 8202b5e7996aeaddfe6a04b74e3a320c 793 SUPERFAMILY SSF48208 245 678 5.71E-66 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 C4901_07270 8202b5e7996aeaddfe6a04b74e3a320c 793 Gene3D G3DSA:2.70.98.10 1 264 2.7E-64 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 C4901_07270 8202b5e7996aeaddfe6a04b74e3a320c 793 Pfam PF09137 Glucodextranase, domain N 13 264 2.3E-69 T 14-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 C4901_07270 8202b5e7996aeaddfe6a04b74e3a320c 793 SUPERFAMILY SSF74650 12 264 1.04E-51 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 C4901_07270 8202b5e7996aeaddfe6a04b74e3a320c 793 Pfam PF00723 Glycosyl hydrolases family 15 368 625 6.0E-10 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 C4901_07270 8202b5e7996aeaddfe6a04b74e3a320c 793 Pfam PF00723 Glycosyl hydrolases family 15 283 344 2.5E-6 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 C4901_07270 8202b5e7996aeaddfe6a04b74e3a320c 793 Gene3D G3DSA:1.50.10.10 272 698 3.5E-144 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 C4901_14350 8cbbef86d75cda4e930ea3f7aaff8f8a 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 C4901_14350 8cbbef86d75cda4e930ea3f7aaff8f8a 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.312 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C4901_14350 8cbbef86d75cda4e930ea3f7aaff8f8a 145 SUPERFAMILY SSF52161 1 139 5.49E-56 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14350 8cbbef86d75cda4e930ea3f7aaff8f8a 145 Gene3D G3DSA:3.90.1180.10 1 142 3.9E-59 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14350 8cbbef86d75cda4e930ea3f7aaff8f8a 145 Pfam PF00572 Ribosomal protein L13 15 138 1.2E-53 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C4901_14350 8cbbef86d75cda4e930ea3f7aaff8f8a 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 3 141 9.0E-62 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14350 8cbbef86d75cda4e930ea3f7aaff8f8a 145 PIRSF PIRSF002181 1 145 4.1E-49 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 C4901_07320 8542b4ca4584072091afa0a1f453b725 91 SUPERFAMILY SSF55464 1 85 2.33E-11 T 14-10-2018 C4901_07320 8542b4ca4584072091afa0a1f453b725 91 Pfam PF08751 TrwC relaxase 1 89 1.0E-13 T 14-10-2018 IPR014862 TrwC relaxase C4901_10015 3873dd8a3b119cd453b9f739de12860e 286 Gene3D G3DSA:2.60.120.10 150 255 2.7E-89 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_10015 3873dd8a3b119cd453b9f739de12860e 286 Pfam PF02678 Pirin 29 128 3.8E-34 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 C4901_10015 3873dd8a3b119cd453b9f739de12860e 286 Pfam PF05726 Pirin C-terminal cupin domain 184 285 9.5E-28 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 C4901_10015 3873dd8a3b119cd453b9f739de12860e 286 PIRSF PIRSF006232 9 286 2.9E-91 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 C4901_10015 3873dd8a3b119cd453b9f739de12860e 286 SUPERFAMILY SSF51182 13 285 1.97E-80 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_10015 3873dd8a3b119cd453b9f739de12860e 286 Gene3D G3DSA:2.60.120.10 24 281 2.7E-89 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_03420 bab0eae101ee1b79c3a5bd071b7b3897 258 Gene3D G3DSA:3.10.20.310 56 124 1.8E-10 T 14-10-2018 C4901_03420 bab0eae101ee1b79c3a5bd071b7b3897 258 Gene3D G3DSA:3.40.50.11690 129 253 4.1E-31 T 14-10-2018 C4901_03420 bab0eae101ee1b79c3a5bd071b7b3897 258 Pfam PF03799 Cell division protein FtsQ 130 241 1.1E-14 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB C4901_03420 bab0eae101ee1b79c3a5bd071b7b3897 258 Pfam PF08478 POTRA domain, FtsQ-type 57 123 2.8E-8 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type C4901_03420 bab0eae101ee1b79c3a5bd071b7b3897 258 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 27 249 17.886 T 14-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 C4901_07655 63d004817b663475138c2f5f27742af0 869 SUPERFAMILY SSF52980 621 777 1.13E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C4901_07655 63d004817b663475138c2f5f27742af0 869 TIGRFAM TIGR03623 TIGR03623: probable DNA repair protein 24 859 1.1E-185 T 14-10-2018 IPR019925 DNA repair protein, predicted C4901_07655 63d004817b663475138c2f5f27742af0 869 SUPERFAMILY SSF52540 250 513 1.2E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07655 63d004817b663475138c2f5f27742af0 869 Pfam PF12705 PD-(D/E)XK nuclease superfamily 603 858 4.9E-23 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type C4901_04455 3c004da8b7f659d68b573e447da0d08e 157 Gene3D G3DSA:3.40.630.30 5 148 2.3E-31 T 14-10-2018 C4901_04455 3c004da8b7f659d68b573e447da0d08e 157 SUPERFAMILY SSF55729 5 125 1.35E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_04455 3c004da8b7f659d68b573e447da0d08e 157 Pfam PF00583 Acetyltransferase (GNAT) family 43 119 5.7E-11 T 14-10-2018 IPR000182 GNAT domain C4901_13540 0c76b6461edc0a22844e8e8331b7fb0b 98 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 14 91 9.5E-24 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system C4901_13540 0c76b6461edc0a22844e8e8331b7fb0b 98 Gene3D G3DSA:3.10.450.530 3 94 2.6E-17 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily C4901_14930 16372dfa66d98ee42db8a48bb3280820 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 31.599 T 14-10-2018 IPR033747 Class I PurE C4901_14930 16372dfa66d98ee42db8a48bb3280820 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 157 8.9E-63 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C4901_14930 16372dfa66d98ee42db8a48bb3280820 163 PIRSF PIRSF001338 1 161 3.2E-64 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 C4901_14930 16372dfa66d98ee42db8a48bb3280820 163 Gene3D G3DSA:3.40.50.7700 1 162 2.3E-68 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 C4901_14930 16372dfa66d98ee42db8a48bb3280820 163 Pfam PF00731 AIR carboxylase 5 152 6.9E-61 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C4901_14930 16372dfa66d98ee42db8a48bb3280820 163 SMART SM01001 3 154 8.4E-96 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 C4901_14930 16372dfa66d98ee42db8a48bb3280820 163 SUPERFAMILY SSF52255 4 159 3.92E-63 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 C4901_16430 4856adb0c04cbece24217d24e969400a 144 SUPERFAMILY SSF88723 3 137 4.49E-28 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_16430 4856adb0c04cbece24217d24e969400a 144 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 136 11.791 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_16430 4856adb0c04cbece24217d24e969400a 144 Pfam PF01850 PIN domain 3 124 3.3E-13 T 14-10-2018 IPR002716 PIN domain C4901_16430 4856adb0c04cbece24217d24e969400a 144 Gene3D G3DSA:3.40.50.1010 2 139 1.2E-38 T 14-10-2018 C4901_14420 949936c721e4955a627e7192f2e8c631 206 SUPERFAMILY SSF74653 86 198 3.66E-18 T 14-10-2018 C4901_14420 949936c721e4955a627e7192f2e8c631 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 178 3.6E-11 T 14-10-2018 IPR006260 TonB/TolA, C-terminal C4901_14420 949936c721e4955a627e7192f2e8c631 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 128 186 5.5E-8 T 14-10-2018 IPR037682 TonB, C-terminal GO:0055085 C4901_14420 949936c721e4955a627e7192f2e8c631 206 Gene3D G3DSA:3.30.1150.10 77 199 2.2E-16 T 14-10-2018 C4901_05830 34ffcb36eed0589432f51f30d01fa91f 257 SMART SM00849 12 167 1.1E-28 T 14-10-2018 IPR001279 Metallo-beta-lactamase C4901_05830 34ffcb36eed0589432f51f30d01fa91f 257 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 168 255 1.7E-27 T 14-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C4901_05830 34ffcb36eed0589432f51f30d01fa91f 257 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 255 41.011 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C4901_05830 34ffcb36eed0589432f51f30d01fa91f 257 SUPERFAMILY SSF56281 7 255 1.82E-67 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_05830 34ffcb36eed0589432f51f30d01fa91f 257 PIRSF PIRSF005457 1 255 5.8E-93 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C4901_05830 34ffcb36eed0589432f51f30d01fa91f 257 Pfam PF00753 Metallo-beta-lactamase superfamily 26 167 1.3E-13 T 14-10-2018 IPR001279 Metallo-beta-lactamase C4901_05830 34ffcb36eed0589432f51f30d01fa91f 257 Gene3D G3DSA:3.60.15.10 1 255 2.0E-84 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_05830 34ffcb36eed0589432f51f30d01fa91f 257 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 5 255 1.4E-94 T 14-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 C4901_11840 dd49536b7d248c4f5d3e85b0eeb12e83 361 Gene3D G3DSA:3.40.50.300 28 188 1.2E-14 T 14-10-2018 C4901_11840 dd49536b7d248c4f5d3e85b0eeb12e83 361 PRINTS PR00364 Disease resistance protein signature 118 132 9.2E-5 T 14-10-2018 C4901_11840 dd49536b7d248c4f5d3e85b0eeb12e83 361 PRINTS PR00364 Disease resistance protein signature 45 60 9.2E-5 T 14-10-2018 C4901_11840 dd49536b7d248c4f5d3e85b0eeb12e83 361 PRINTS PR00364 Disease resistance protein signature 228 242 9.2E-5 T 14-10-2018 C4901_11840 dd49536b7d248c4f5d3e85b0eeb12e83 361 Pfam PF13401 AAA domain 42 170 9.2E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_11840 dd49536b7d248c4f5d3e85b0eeb12e83 361 SUPERFAMILY SSF52540 5 262 1.89E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11840 dd49536b7d248c4f5d3e85b0eeb12e83 361 SMART SM00382 42 185 8.9E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_11560 0dd145d5f2e496eb4fd0465f654883dd 162 Gene3D G3DSA:3.40.50.1010 4 139 4.4E-7 T 14-10-2018 C4901_11560 0dd145d5f2e496eb4fd0465f654883dd 162 Pfam PF01850 PIN domain 6 130 9.3E-9 T 14-10-2018 IPR002716 PIN domain C4901_11560 0dd145d5f2e496eb4fd0465f654883dd 162 SUPERFAMILY SSF88723 8 129 4.32E-9 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_13510 5089b18eb2d70db9ff7ccea2f8a08c37 94 Pfam PF05717 IS66 Orf2 like protein 17 67 2.3E-12 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_16090 72ef44c32b7c864467d60686a13210f3 639 SUPERFAMILY SSF56112 335 615 9.31E-54 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_16090 72ef44c32b7c864467d60686a13210f3 639 Gene3D G3DSA:1.10.510.10 442 618 6.7E-27 T 14-10-2018 C4901_16090 72ef44c32b7c864467d60686a13210f3 639 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 481 493 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 C4901_16090 72ef44c32b7c864467d60686a13210f3 639 Pfam PF00069 Protein kinase domain 343 600 1.3E-29 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C4901_16090 72ef44c32b7c864467d60686a13210f3 639 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 349 372 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 C4901_16090 72ef44c32b7c864467d60686a13210f3 639 SMART SM00220 343 610 1.0E-29 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C4901_16090 72ef44c32b7c864467d60686a13210f3 639 Gene3D G3DSA:3.30.200.20 334 440 1.2E-18 T 14-10-2018 C4901_06860 87fa4b197619c79998974a799f07bc4b 97 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 95 1.4E-15 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C4901_06860 87fa4b197619c79998974a799f07bc4b 97 Gene3D G3DSA:3.30.2310.20 3 95 1.6E-12 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 ProSitePatterns PS01117 MarR-type HTH domain signature. 101 134 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 SMART SM00347 61 161 2.7E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 Pfam PF01047 MarR family 71 126 4.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 PRINTS PR00598 Bacterial regulatory protein MarR family signature 121 137 2.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 2.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 PRINTS PR00598 Bacterial regulatory protein MarR family signature 151 171 2.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 117 2.7E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 Gene3D G3DSA:1.10.10.10 21 173 2.1E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_01245 b1681f2b40635f1c70a5354a92bef6a6 233 SUPERFAMILY SSF46785 37 177 1.39E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_05755 8362cd906dedd5a9079510689ceade1c 876 Gene3D G3DSA:3.30.450.20 310 432 1.1E-17 T 14-10-2018 C4901_05755 8362cd906dedd5a9079510689ceade1c 876 Pfam PF00989 PAS fold 320 431 1.6E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_05755 8362cd906dedd5a9079510689ceade1c 876 SUPERFAMILY SSF141868 625 870 2.48E-66 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05755 8362cd906dedd5a9079510689ceade1c 876 SUPERFAMILY SSF55073 451 608 4.87E-48 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_05755 8362cd906dedd5a9079510689ceade1c 876 SMART SM00267 435 607 2.6E-63 T 14-10-2018 IPR000160 GGDEF domain C4901_05755 8362cd906dedd5a9079510689ceade1c 876 Gene3D G3DSA:3.30.70.270 439 611 8.3E-58 T 14-10-2018 C4901_05755 8362cd906dedd5a9079510689ceade1c 876 Pfam PF00990 Diguanylate cyclase, GGDEF domain 446 602 4.3E-47 T 14-10-2018 IPR000160 GGDEF domain C4901_05755 8362cd906dedd5a9079510689ceade1c 876 SUPERFAMILY SSF55785 304 431 8.03E-18 T 14-10-2018 IPR035965 PAS domain superfamily C4901_05755 8362cd906dedd5a9079510689ceade1c 876 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 442 605 1.8E-43 T 14-10-2018 IPR000160 GGDEF domain C4901_05755 8362cd906dedd5a9079510689ceade1c 876 Pfam PF00563 EAL domain 624 858 1.0E-60 T 14-10-2018 IPR001633 EAL domain C4901_05755 8362cd906dedd5a9079510689ceade1c 876 Gene3D G3DSA:3.20.20.450 620 871 1.2E-77 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05755 8362cd906dedd5a9079510689ceade1c 876 SMART SM00052 618 863 2.2E-74 T 14-10-2018 IPR001633 EAL domain C4901_05755 8362cd906dedd5a9079510689ceade1c 876 SMART SM00091 319 387 2.4E-8 T 14-10-2018 IPR000014 PAS domain C4901_05755 8362cd906dedd5a9079510689ceade1c 876 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 324 442 8.7E-11 T 14-10-2018 IPR000014 PAS domain C4901_11300 7b86d21468d93a74e6dfe93127dbcb48 169 Pfam PF02464 Competence-damaged protein 11 160 2.1E-53 T 14-10-2018 IPR008136 CinA, C-terminal C4901_11300 7b86d21468d93a74e6dfe93127dbcb48 169 Gene3D G3DSA:3.90.950.20 3 163 5.2E-56 T 14-10-2018 IPR036653 CinA-like, C-terminal C4901_11300 7b86d21468d93a74e6dfe93127dbcb48 169 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 16 159 1.8E-42 T 14-10-2018 IPR008136 CinA, C-terminal C4901_11300 7b86d21468d93a74e6dfe93127dbcb48 169 SUPERFAMILY SSF142433 10 163 2.88E-50 T 14-10-2018 IPR036653 CinA-like, C-terminal C4901_02885 e495eab1561f13cdbc27957ba461f08f 487 Gene3D G3DSA:3.30.2290.10 26 245 2.2E-21 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal C4901_02885 e495eab1561f13cdbc27957ba461f08f 487 Pfam PF01523 Putative modulator of DNA gyrase 43 337 2.3E-72 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 C4901_02885 e495eab1561f13cdbc27957ba461f08f 487 PIRSF PIRSF004919 27 486 3.9E-143 T 14-10-2018 IPR025502 TldD C4901_02885 e495eab1561f13cdbc27957ba461f08f 487 SUPERFAMILY SSF111283 29 485 3.79E-134 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 C4901_11635 48ab611dea757200f772cfbc9e584c9b 283 SUPERFAMILY SSF141868 40 280 5.89E-59 T 14-10-2018 IPR035919 EAL domain superfamily C4901_11635 48ab611dea757200f772cfbc9e584c9b 283 Pfam PF00563 EAL domain 39 280 1.1E-56 T 14-10-2018 IPR001633 EAL domain C4901_11635 48ab611dea757200f772cfbc9e584c9b 283 SMART SM00052 32 283 7.3E-48 T 14-10-2018 IPR001633 EAL domain C4901_11635 48ab611dea757200f772cfbc9e584c9b 283 Gene3D G3DSA:3.20.20.450 37 283 7.6E-68 T 14-10-2018 IPR035919 EAL domain superfamily C4901_04995 09a9bf3dd3e7d5495df59945501b596c 440 Gene3D G3DSA:3.30.420.380 69 206 4.2E-24 T 14-10-2018 C4901_04995 09a9bf3dd3e7d5495df59945501b596c 440 Pfam PF05134 Type II secretion system (T2SS), protein L 73 224 1.7E-14 T 14-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain C4901_04995 09a9bf3dd3e7d5495df59945501b596c 440 Pfam PF12693 GspL periplasmic domain 288 436 2.0E-13 T 14-10-2018 IPR025691 GspL periplasmic domain C4901_04995 09a9bf3dd3e7d5495df59945501b596c 440 SUPERFAMILY SSF53067 64 178 5.44E-14 T 14-10-2018 C4901_04995 09a9bf3dd3e7d5495df59945501b596c 440 PIRSF PIRSF015761 66 171 5.4E-12 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 C4901_04995 09a9bf3dd3e7d5495df59945501b596c 440 PIRSF PIRSF015761 280 438 1.2E-10 T 14-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 C4901_04995 09a9bf3dd3e7d5495df59945501b596c 440 Gene3D G3DSA:3.30.1360.100 354 439 3.4E-5 T 14-10-2018 C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 SUPERFAMILY SSF51905 7 381 3.02E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 Gene3D G3DSA:3.50.50.60 8 334 2.0E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 Pfam PF01494 FAD binding domain 8 335 8.9E-29 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 290 303 - T 14-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 8 384 6.3E-115 T 14-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 276 291 3.3E-19 T 14-10-2018 C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 3.3E-19 T 14-10-2018 C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.3E-19 T 14-10-2018 C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 291 307 3.3E-19 T 14-10-2018 C4901_01635 c0e72ef0121ebe6ba287f325c41a2333 399 Gene3D G3DSA:3.30.9.50 77 265 2.0E-94 T 14-10-2018 C4901_04980 3a7da1ff0aaf6facfc9c23791ddcddd5 130 TIGRFAM TIGR01707 gspI: type II secretion system protein I 16 113 3.7E-23 T 14-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 C4901_04980 3a7da1ff0aaf6facfc9c23791ddcddd5 130 SUPERFAMILY SSF54523 17 49 1.96E-5 T 14-10-2018 C4901_04980 3a7da1ff0aaf6facfc9c23791ddcddd5 130 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 37 1.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04980 3a7da1ff0aaf6facfc9c23791ddcddd5 130 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 16 37 3.9E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04980 3a7da1ff0aaf6facfc9c23791ddcddd5 130 SUPERFAMILY SSF54523 48 128 3.69E-15 T 14-10-2018 C4901_04980 3a7da1ff0aaf6facfc9c23791ddcddd5 130 Gene3D G3DSA:3.30.1300.30 43 128 2.5E-19 T 14-10-2018 C4901_04980 3a7da1ff0aaf6facfc9c23791ddcddd5 130 Pfam PF02501 Type II secretion system (T2SS), protein I 50 127 2.0E-18 T 14-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 C4901_04980 3a7da1ff0aaf6facfc9c23791ddcddd5 130 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_11780 26cc23e9053f5c576fd431be019ffeaa 374 Gene3D G3DSA:3.40.50.2000 22 361 1.9E-67 T 14-10-2018 C4901_11780 26cc23e9053f5c576fd431be019ffeaa 374 SUPERFAMILY SSF53756 12 363 2.24E-75 T 14-10-2018 C4901_11780 26cc23e9053f5c576fd431be019ffeaa 374 Pfam PF13439 Glycosyltransferase Family 4 22 180 1.3E-18 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C4901_11780 26cc23e9053f5c576fd431be019ffeaa 374 Gene3D G3DSA:3.40.50.2000 176 352 1.9E-67 T 14-10-2018 C4901_11780 26cc23e9053f5c576fd431be019ffeaa 374 Pfam PF00534 Glycosyl transferases group 1 196 346 5.1E-34 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_09670 3220c92d003bdaf5d65a063b0884a8ff 257 SUPERFAMILY SSF53335 11 241 1.22E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_09670 3220c92d003bdaf5d65a063b0884a8ff 257 Pfam PF08241 Methyltransferase domain 49 144 1.1E-22 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C4901_09670 3220c92d003bdaf5d65a063b0884a8ff 257 Gene3D G3DSA:3.40.50.150 26 254 2.4E-54 T 14-10-2018 C4901_00525 4cc0d7ffdf249a70ca3a1d8d4dd490e9 290 SUPERFAMILY SSF53335 86 271 5.48E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_00525 4cc0d7ffdf249a70ca3a1d8d4dd490e9 290 Gene3D G3DSA:3.40.50.150 98 289 1.8E-47 T 14-10-2018 C4901_00525 4cc0d7ffdf249a70ca3a1d8d4dd490e9 290 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 4 289 26.284 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 C4901_00525 4cc0d7ffdf249a70ca3a1d8d4dd490e9 290 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 5 289 8.0E-62 T 14-10-2018 C4901_03255 701432cade53b957062ab478cae19824 160 SUPERFAMILY SSF52374 23 154 7.11E-22 T 14-10-2018 C4901_03255 701432cade53b957062ab478cae19824 160 Pfam PF01467 Cytidylyltransferase-like 27 118 2.9E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C4901_03255 701432cade53b957062ab478cae19824 160 Gene3D G3DSA:3.40.50.620 11 158 6.4E-32 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_03255 701432cade53b957062ab478cae19824 160 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 14 155 1.9E-56 T 14-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 C4901_03255 701432cade53b957062ab478cae19824 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 25 88 1.1E-13 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C4901_15620 84c20ce40c719d68b6464d1ba2f28aeb 1214 SUPERFAMILY SSF52540 422 687 3.95E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15620 84c20ce40c719d68b6464d1ba2f28aeb 1214 SUPERFAMILY SSF48452 124 265 2.15E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_15620 84c20ce40c719d68b6464d1ba2f28aeb 1214 SUPERFAMILY SSF55073 294 412 5.49E-5 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_15620 84c20ce40c719d68b6464d1ba2f28aeb 1214 Pfam PF13191 AAA ATPase domain 434 617 2.5E-16 T 14-10-2018 C4901_15620 84c20ce40c719d68b6464d1ba2f28aeb 1214 Gene3D G3DSA:1.10.10.10 8 109 2.7E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_15620 84c20ce40c719d68b6464d1ba2f28aeb 1214 Gene3D G3DSA:1.25.40.10 110 268 2.6E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_15620 84c20ce40c719d68b6464d1ba2f28aeb 1214 Pfam PF03704 Bacterial transcriptional activator domain 125 244 1.9E-7 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain C4901_15620 84c20ce40c719d68b6464d1ba2f28aeb 1214 SMART SM01043 109 248 0.0035 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain C4901_16490 a42530def74d825558215b3499d3b48e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_16490 a42530def74d825558215b3499d3b48e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_16490 a42530def74d825558215b3499d3b48e 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 1.1E-6 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_16490 a42530def74d825558215b3499d3b48e 147 Gene3D G3DSA:1.10.10.10 3 145 2.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_16490 a42530def74d825558215b3499d3b48e 147 Pfam PF12802 MarR family 35 94 1.2E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_16490 a42530def74d825558215b3499d3b48e 147 SUPERFAMILY SSF46785 12 145 1.06E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_16490 a42530def74d825558215b3499d3b48e 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 69 103 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site C4901_16490 a42530def74d825558215b3499d3b48e 147 SMART SM00347 30 130 2.8E-23 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 4 805 98.463 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Pfam PF00204 DNA gyrase B 222 391 2.6E-58 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 SMART SM00387 33 177 2.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 ProSitePatterns PS00177 DNA topoisomerase II signature. 423 431 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 72 85 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 269 282 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 421 435 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 526 538 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 737 753 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 488 504 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 37 52 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 506 523 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.2E-68 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Gene3D G3DSA:3.30.565.10 4 221 1.3E-84 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 471 480 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 221 243 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 313 329 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 361 375 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 182 197 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 197 210 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 7 17 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 375 395 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 758 770 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 PRINTS PR01159 DNA gyrase subunit B signature 774 790 2.7E-71 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 SUPERFAMILY SSF54211 222 393 3.98E-59 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Pfam PF01751 Toprim domain 420 532 6.6E-18 T 14-10-2018 IPR006171 TOPRIM domain C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 735 794 1.7E-28 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 SMART SM00433 37 798 1.2E-256 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Gene3D G3DSA:3.10.20.690 593 681 7.3E-10 T 14-10-2018 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 7 805 2.2E-296 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 SUPERFAMILY SSF55874 8 220 1.96E-68 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Gene3D G3DSA:3.30.230.10 222 393 2.4E-72 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 174 1.7E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 SUPERFAMILY SSF56719 395 796 3.92E-86 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Gene3D G3DSA:3.40.50.670 399 571 3.4E-74 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_00025 52e1afbba1fbb15c509e303bb5e390dd 805 Gene3D G3DSA:3.40.50.670 705 803 4.7E-25 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Gene3D G3DSA:3.30.70.1320 135 327 2.3E-253 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 SUPERFAMILY SSF82693 42 127 7.59E-20 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Gene3D G3DSA:3.30.70.1430 559 662 2.3E-253 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1036 0.0 T 14-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Gene3D G3DSA:3.30.70.1440 663 862 2.3E-253 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Gene3D G3DSA:3.30.2090.10 714 802 2.3E-253 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 PRINTS PR00702 Acriflavin resistance protein family signature 443 466 2.5E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 2.5E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 PRINTS PR00702 Acriflavin resistance protein family signature 360 381 2.5E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 PRINTS PR00702 Acriflavin resistance protein family signature 333 356 2.5E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 2.5E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 2.5E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 2.5E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 2.5E-39 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Pfam PF00873 AcrB/AcrD/AcrF family 7 1027 2.0E-225 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Gene3D G3DSA:3.30.70.1430 42 810 2.3E-253 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 SUPERFAMILY SSF82693 138 325 3.4E-16 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 SUPERFAMILY SSF82866 295 496 1.1E-39 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Gene3D G3DSA:3.30.2090.10 182 273 2.3E-253 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 SUPERFAMILY SSF82714 186 268 7.72E-17 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 SUPERFAMILY SSF82714 714 797 1.31E-16 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Gene3D G3DSA:1.20.1640.10 12 505 2.3E-253 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 Gene3D G3DSA:1.20.1640.10 506 1026 2.3E-253 T 14-10-2018 C4901_16225 fd7a5c593c97377627271af3c8891d26 1046 SUPERFAMILY SSF82866 798 1032 1.7E-46 T 14-10-2018 C4901_17020 4d7c135a5bf5bba38c74dfc562d6d276 101 ProSitePatterns PS00605 ATP synthase c subunit signature. 48 69 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17020 4d7c135a5bf5bba38c74dfc562d6d276 101 Hamap MF_01396 ATP synthase subunit c [atpH]. 18 83 13.278 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17020 4d7c135a5bf5bba38c74dfc562d6d276 101 SUPERFAMILY SSF81333 12 86 2.75E-15 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily C4901_17020 4d7c135a5bf5bba38c74dfc562d6d276 101 Gene3D G3DSA:1.20.20.10 7 86 3.6E-24 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17020 4d7c135a5bf5bba38c74dfc562d6d276 101 Pfam PF00137 ATP synthase subunit C 20 80 2.4E-8 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 C4901_17020 4d7c135a5bf5bba38c74dfc562d6d276 101 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 28 84 1.1E-20 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 C4901_01110 ac0674d6eda84ba3b91e7e74bbc7a38c 132 Gene3D G3DSA:1.20.120.910 1 124 4.3E-30 T 14-10-2018 C4901_01110 ac0674d6eda84ba3b91e7e74bbc7a38c 132 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 86 121 2.3E-12 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 C4901_01110 ac0674d6eda84ba3b91e7e74bbc7a38c 132 SUPERFAMILY SSF57716 88 121 2.0E-8 T 14-10-2018 C4901_01110 ac0674d6eda84ba3b91e7e74bbc7a38c 132 SUPERFAMILY SSF109635 4 86 2.62E-10 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily C4901_07225 da6fb89f9e2d18af77a05b331ec90c88 227 SUPERFAMILY SSF52833 1 82 2.2E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_07225 da6fb89f9e2d18af77a05b331ec90c88 227 Pfam PF02798 Glutathione S-transferase, N-terminal domain 3 79 1.6E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_07225 da6fb89f9e2d18af77a05b331ec90c88 227 Pfam PF00043 Glutathione S-transferase, C-terminal domain 129 195 3.0E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C4901_07225 da6fb89f9e2d18af77a05b331ec90c88 227 SUPERFAMILY SSF47616 76 202 1.91E-35 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C4901_07225 da6fb89f9e2d18af77a05b331ec90c88 227 Gene3D G3DSA:3.40.30.10 2 201 3.6E-82 T 14-10-2018 C4901_07225 da6fb89f9e2d18af77a05b331ec90c88 227 Gene3D G3DSA:1.20.1050.10 86 194 3.6E-82 T 14-10-2018 C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 SUPERFAMILY SSF46785 1 113 7.71E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 Gene3D G3DSA:3.40.190.10 167 267 4.7E-97 T 14-10-2018 C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 Pfam PF03466 LysR substrate binding domain 90 292 1.4E-43 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 2.8E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.0E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 SUPERFAMILY SSF53850 90 298 7.28E-42 T 14-10-2018 C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 Gene3D G3DSA:1.10.10.10 1 83 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_15540 df5dcca5e8b0da0ed6cb53efbf9f9602 312 Gene3D G3DSA:3.40.190.10 93 303 4.7E-97 T 14-10-2018 C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 183 211 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 SUPERFAMILY SSF51735 153 316 2.29E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 Gene3D G3DSA:3.90.180.10 11 345 3.3E-128 T 14-10-2018 C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 SMART SM00829 12 298 0.0082 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 Gene3D G3DSA:3.40.50.720 171 325 3.3E-128 T 14-10-2018 C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 148 1.4E-22 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 SUPERFAMILY SSF50129 13 176 1.95E-48 T 14-10-2018 IPR011032 GroES-like superfamily C4901_04935 f29aaea78358f9bbe1e54cff903b7faa 353 Pfam PF00107 Zinc-binding dehydrogenase 190 310 1.8E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C4901_15600 d7e43fec019c535c7473b7d69ab0cb11 123 Pfam PF00034 Cytochrome c 37 123 2.6E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_15600 d7e43fec019c535c7473b7d69ab0cb11 123 Gene3D G3DSA:1.10.760.10 29 123 3.5E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_15600 d7e43fec019c535c7473b7d69ab0cb11 123 SUPERFAMILY SSF46626 32 123 2.47E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_12055 1985ee27eadc306476388d4805195706 557 SMART SM00316 449 520 5.1E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_12055 1985ee27eadc306476388d4805195706 557 SMART SM00316 275 347 2.1E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_12055 1985ee27eadc306476388d4805195706 557 SMART SM00316 103 171 1.4E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_12055 1985ee27eadc306476388d4805195706 557 SMART SM00316 19 87 0.25 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_12055 1985ee27eadc306476388d4805195706 557 SMART SM00316 190 260 1.5E-30 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_12055 1985ee27eadc306476388d4805195706 557 SMART SM00316 362 434 6.0E-23 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_12055 1985ee27eadc306476388d4805195706 557 Gene3D G3DSA:2.40.50.140 444 527 1.5E-19 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 SUPERFAMILY SSF50249 347 437 4.03E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_12055 1985ee27eadc306476388d4805195706 557 Gene3D G3DSA:2.40.50.140 358 443 1.5E-23 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 Gene3D G3DSA:2.40.50.140 98 182 1.5E-6 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 Gene3D G3DSA:2.40.50.140 269 357 2.1E-29 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 4 520 1.1E-210 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 C4901_12055 1985ee27eadc306476388d4805195706 557 Pfam PF00575 S1 RNA binding domain 361 434 1.1E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 C4901_12055 1985ee27eadc306476388d4805195706 557 Pfam PF00575 S1 RNA binding domain 275 347 9.4E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 C4901_12055 1985ee27eadc306476388d4805195706 557 Pfam PF00575 S1 RNA binding domain 102 171 2.6E-10 T 14-10-2018 IPR003029 S1 domain GO:0003676 C4901_12055 1985ee27eadc306476388d4805195706 557 Pfam PF00575 S1 RNA binding domain 447 520 3.8E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 C4901_12055 1985ee27eadc306476388d4805195706 557 Pfam PF00575 S1 RNA binding domain 189 260 2.7E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 C4901_12055 1985ee27eadc306476388d4805195706 557 SUPERFAMILY SSF50249 189 277 2.24E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_12055 1985ee27eadc306476388d4805195706 557 PIRSF PIRSF002111 1 534 4.0E-213 T 14-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 C4901_12055 1985ee27eadc306476388d4805195706 557 SUPERFAMILY SSF50249 1 112 2.72E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_12055 1985ee27eadc306476388d4805195706 557 SUPERFAMILY SSF50249 256 364 1.43E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_12055 1985ee27eadc306476388d4805195706 557 SUPERFAMILY SSF50249 103 185 3.43E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 8.8E-85 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 SUPERFAMILY SSF50249 429 534 2.91E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_12055 1985ee27eadc306476388d4805195706 557 Gene3D G3DSA:2.40.50.140 187 268 1.1E-28 T 14-10-2018 C4901_12055 1985ee27eadc306476388d4805195706 557 Gene3D G3DSA:2.40.50.140 6 97 1.8E-15 T 14-10-2018 C4901_12090 9b90c43fab4b71a812eb287be2c7b318 361 Gene3D G3DSA:3.90.1150.10 258 361 3.1E-41 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_12090 9b90c43fab4b71a812eb287be2c7b318 361 Gene3D G3DSA:3.40.640.10 17 257 1.8E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_12090 9b90c43fab4b71a812eb287be2c7b318 361 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 360 52.709 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C4901_12090 9b90c43fab4b71a812eb287be2c7b318 361 SUPERFAMILY SSF53383 1 359 2.48E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_12090 9b90c43fab4b71a812eb287be2c7b318 361 PIRSF PIRSF000525 1 361 2.7E-158 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C4901_12090 9b90c43fab4b71a812eb287be2c7b318 361 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site C4901_12090 9b90c43fab4b71a812eb287be2c7b318 361 Pfam PF00266 Aminotransferase class-V 4 349 4.4E-55 T 14-10-2018 IPR000192 Aminotransferase class V domain C4901_12090 9b90c43fab4b71a812eb287be2c7b318 361 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 6.6E-160 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 Pfam PF02954 Bacterial regulatory protein, Fis family 432 469 8.8E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 SUPERFAMILY SSF52540 170 404 3.66E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12190 112157ec2042ff9cf5697c5653364f28 478 SMART SM00448 4 115 2.3E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 SMART SM00382 183 326 2.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_12190 112157ec2042ff9cf5697c5653364f28 478 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 187 200 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 SUPERFAMILY SSF52172 4 206 1.05E-32 T 14-10-2018 IPR011006 CheY-like superfamily C4901_12190 112157ec2042ff9cf5697c5653364f28 478 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 376 385 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_12190 112157ec2042ff9cf5697c5653364f28 478 Gene3D G3DSA:1.10.8.60 335 413 3.1E-19 T 14-10-2018 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 249 264 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 Gene3D G3DSA:3.40.50.300 162 334 1.8E-60 T 14-10-2018 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 Pfam PF00158 Sigma-54 interaction domain 170 329 1.8E-65 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 Gene3D G3DSA:3.40.50.2300 4 139 3.6E-28 T 14-10-2018 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 Gene3D G3DSA:1.10.10.60 422 472 8.5E-9 T 14-10-2018 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 SUPERFAMILY SSF46689 376 471 7.17E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 452 472 2.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 435 452 2.3E-7 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_12190 112157ec2042ff9cf5697c5653364f28 478 Pfam PF00072 Response regulator receiver domain 6 115 9.6E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_15875 b07295c4bad6785b202b78b1c02e674a 216 Pfam PF13505 Outer membrane protein beta-barrel domain 41 205 7.4E-14 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel C4901_15875 b07295c4bad6785b202b78b1c02e674a 216 SUPERFAMILY SSF56925 56 216 1.52E-21 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C4901_15875 b07295c4bad6785b202b78b1c02e674a 216 Gene3D G3DSA:2.40.160.20 46 216 3.1E-24 T 14-10-2018 C4901_16535 142a54713edebe1abae637afba2b08d3 232 Pfam PF00005 ABC transporter 22 156 1.4E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_16535 142a54713edebe1abae637afba2b08d3 232 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_16535 142a54713edebe1abae637afba2b08d3 232 Gene3D G3DSA:3.40.50.300 2 228 2.2E-58 T 14-10-2018 C4901_16535 142a54713edebe1abae637afba2b08d3 232 SUPERFAMILY SSF52540 17 229 4.11E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16535 142a54713edebe1abae637afba2b08d3 232 SMART SM00382 22 205 6.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 Gene3D G3DSA:3.30.465.10 84 208 7.8E-33 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 196 291 3.4E-27 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 21 292 7.2E-57 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 Pfam PF01565 FAD binding domain 39 155 1.6E-17 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 SUPERFAMILY SSF56176 18 199 5.23E-35 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 Gene3D G3DSA:3.30.43.10 4 78 1.6E-17 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 Gene3D G3DSA:3.90.78.10 209 295 5.4E-32 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 SUPERFAMILY SSF56194 190 293 3.4E-34 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03410 eb70fbb1accbdc4dcf7dea200c5ab0d4 295 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 295 80.744 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 SUPERFAMILY SSF82866 793 1015 1.27E-43 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Gene3D G3DSA:3.30.70.1430 40 800 2.0E-276 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 SUPERFAMILY SSF82693 40 130 1.02E-18 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 SUPERFAMILY SSF82714 705 789 1.05E-15 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Pfam PF00873 AcrB/AcrD/AcrF family 4 1010 5.4E-289 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Gene3D G3DSA:3.30.70.1320 135 326 2.0E-276 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Gene3D G3DSA:1.20.1640.10 503 1007 2.0E-276 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Gene3D G3DSA:3.30.70.1440 653 850 2.0E-276 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 SUPERFAMILY SSF82693 137 324 8.89E-20 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Gene3D G3DSA:3.30.2090.10 704 792 2.0E-276 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 609 623 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 5.4E-78 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Gene3D G3DSA:3.30.2090.10 179 269 2.0E-276 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 SUPERFAMILY SSF82714 183 265 1.1E-14 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 SUPERFAMILY SSF82693 555 650 2.14E-8 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 SUPERFAMILY SSF82866 290 490 6.41E-42 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Gene3D G3DSA:1.20.1640.10 10 502 2.0E-276 T 14-10-2018 C4901_07900 9273e123bd19c78084e538e6552c19b0 1027 Gene3D G3DSA:3.30.70.1430 557 652 2.0E-276 T 14-10-2018 C4901_15785 dabc76a308fd9160fbad5c459653e405 202 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 195 20.467 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 C4901_15785 dabc76a308fd9160fbad5c459653e405 202 SMART SM01207 8 187 6.7E-78 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 C4901_15785 dabc76a308fd9160fbad5c459653e405 202 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 9 196 1.6E-61 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 C4901_15785 dabc76a308fd9160fbad5c459653e405 202 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 186 1.4E-50 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 SUPERFAMILY SSF55874 444 590 9.04E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 SUPERFAMILY SSF55785 233 361 6.28E-26 T 14-10-2018 IPR035965 PAS domain superfamily C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 Gene3D G3DSA:3.30.450.20 242 361 5.0E-30 T 14-10-2018 C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 243 368 6.3E-28 T 14-10-2018 IPR000014 PAS domain C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 SMART SM00091 247 313 4.4E-11 T 14-10-2018 IPR000014 PAS domain C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 Gene3D G3DSA:1.10.287.130 362 433 1.1E-10 T 14-10-2018 C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 Pfam PF00512 His Kinase A (phospho-acceptor) domain 370 430 9.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 SUPERFAMILY SSF47384 354 431 4.12E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 Pfam PF00989 PAS fold 249 360 3.3E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 SMART SM00387 483 591 2.6E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 Gene3D G3DSA:3.30.565.10 446 594 2.4E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_03865 239bfcc3aa98f713d1a917defafdf570 598 SMART SM00388 369 437 3.1E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_15535 15b0722f6af75785f475b0bcbae0b7aa 237 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 24 223 4.1E-53 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 C4901_15535 15b0722f6af75785f475b0bcbae0b7aa 237 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 29 221 1.6E-79 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 C4901_15535 15b0722f6af75785f475b0bcbae0b7aa 237 Gene3D G3DSA:3.40.50.620 2 233 2.2E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_15535 15b0722f6af75785f475b0bcbae0b7aa 237 SUPERFAMILY SSF52402 7 184 2.26E-44 T 14-10-2018 C4901_15535 15b0722f6af75785f475b0bcbae0b7aa 237 PIRSF PIRSF000857 2 229 1.3E-78 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 C4901_15535 15b0722f6af75785f475b0bcbae0b7aa 237 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 25 198 1.7E-43 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 C4901_02835 a960ac08ddad8643a5f0800b670ac140 182 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 2 165 17.892 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 C4901_02835 a960ac08ddad8643a5f0800b670ac140 182 Gene3D G3DSA:3.30.160.150 17 168 1.4E-31 T 14-10-2018 C4901_02835 a960ac08ddad8643a5f0800b670ac140 182 Pfam PF04390 Lipopolysaccharide-assembly 54 159 2.4E-5 T 14-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 C4901_01670 7eea68c642d1bc8e7839475a41906f96 261 Pfam PF13277 YmdB-like protein 4 255 5.4E-101 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like C4901_01670 7eea68c642d1bc8e7839475a41906f96 261 Gene3D G3DSA:3.60.21.10 1 261 2.0E-103 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_01670 7eea68c642d1bc8e7839475a41906f96 261 SUPERFAMILY SSF56300 1 256 8.73E-77 T 14-10-2018 C4901_01670 7eea68c642d1bc8e7839475a41906f96 261 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 259 2.1E-82 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like C4901_01670 7eea68c642d1bc8e7839475a41906f96 261 PIRSF PIRSF004789 1 261 8.4E-92 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like C4901_06080 ec01e3a986b70e8e8a58c42016149621 395 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 216 316 2.5E-7 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_06080 ec01e3a986b70e8e8a58c42016149621 395 Gene3D G3DSA:3.50.50.100 1 395 3.5E-54 T 14-10-2018 C4901_06080 ec01e3a986b70e8e8a58c42016149621 395 SUPERFAMILY SSF51905 5 332 2.66E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 SUPERFAMILY SSF51569 1 291 1.83E-99 T 14-10-2018 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 43.559 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 Gene3D G3DSA:3.30.160.740 394 443 3.1E-5 T 14-10-2018 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 Gene3D G3DSA:1.10.238.260 280 393 8.1E-37 T 14-10-2018 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 Pfam PF00682 HMGL-like 7 273 1.4E-96 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 Gene3D G3DSA:3.20.20.70 2 276 1.9E-108 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 500 2.5E-36 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 SMART SM00917 370 500 6.9E-41 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 497 6.1E-216 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_12690 8fcfa55b9aa3faf74a89f669f3ef510b 514 SUPERFAMILY SSF110921 394 499 1.83E-25 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 C4901_11900 3c38e0d80a42a9f7e06af7e37facf028 180 Gene3D G3DSA:3.30.1370.110 51 180 1.1E-45 T 14-10-2018 C4901_11900 3c38e0d80a42a9f7e06af7e37facf028 180 SUPERFAMILY SSF160443 94 177 3.4E-19 T 14-10-2018 IPR036063 Smr domain superfamily C4901_11900 3c38e0d80a42a9f7e06af7e37facf028 180 Pfam PF01713 Smr domain 96 177 3.6E-26 T 14-10-2018 IPR002625 Smr domain C4901_11900 3c38e0d80a42a9f7e06af7e37facf028 180 SMART SM00463 93 177 3.3E-13 T 14-10-2018 IPR002625 Smr domain C4901_16495 96e7a70735243e88089026c42f47970e 138 SUPERFAMILY SSF47090 80 136 7.38E-14 T 14-10-2018 IPR036365 PGBD-like superfamily C4901_16495 96e7a70735243e88089026c42f47970e 138 Pfam PF01471 Putative peptidoglycan binding domain 84 133 9.8E-11 T 14-10-2018 IPR002477 Peptidoglycan binding-like C4901_16495 96e7a70735243e88089026c42f47970e 138 Gene3D G3DSA:1.10.101.10 62 138 1.1E-13 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 SUPERFAMILY SSF52172 2 128 1.1E-30 T 14-10-2018 IPR011006 CheY-like superfamily C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 Pfam PF00072 Response regulator receiver domain 3 113 3.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 203 6.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 SUPERFAMILY SSF46894 140 210 1.16E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 SMART SM00448 1 113 1.1E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 SMART SM00421 148 205 1.3E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06840 15cd316c766d3ecf8a0f144b32474b36 214 Gene3D G3DSA:3.40.50.12740 1 210 5.0E-59 T 14-10-2018 C4901_13910 8bd9943d1c4a3019cfde71d38fd7dc05 371 SUPERFAMILY SSF46626 156 265 8.0E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13910 8bd9943d1c4a3019cfde71d38fd7dc05 371 Gene3D G3DSA:1.10.760.10 274 371 1.5E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13910 8bd9943d1c4a3019cfde71d38fd7dc05 371 Gene3D G3DSA:1.10.760.10 144 271 6.5E-28 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13910 8bd9943d1c4a3019cfde71d38fd7dc05 371 SUPERFAMILY SSF46626 279 369 7.44E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13910 8bd9943d1c4a3019cfde71d38fd7dc05 371 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 285 364 1.8E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_13910 8bd9943d1c4a3019cfde71d38fd7dc05 371 Gene3D G3DSA:1.10.760.10 32 126 8.7E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13910 8bd9943d1c4a3019cfde71d38fd7dc05 371 SUPERFAMILY SSF46626 39 124 6.69E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 48 55 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 2 299 77.904 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 SUPERFAMILY SSF53671 2 298 6.15E-104 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 143 2.4E-49 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 79 92 1.0E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 119 133 1.0E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 277 288 1.0E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 46 60 1.0E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00102 Ornithine carbamoyltransferase signature 215 225 1.0E-30 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 3 298 1.0E-115 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 48 67 7.4E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 263 286 7.4E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 130 141 7.4E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 251 260 7.4E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 Gene3D G3DSA:3.40.50.1370 3 132 6.8E-114 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 Gene3D G3DSA:3.40.50.1370 133 294 6.8E-114 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C4901_03830 34c864d4135f3ad18be852eaa5651cd5 299 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 150 296 8.4E-50 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 C4901_11205 8a929e7950bc623415862cc6d4fdc26e 81 SUPERFAMILY SSF47598 1 45 3.0E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_11205 8a929e7950bc623415862cc6d4fdc26e 81 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 69 3.5E-18 T 14-10-2018 IPR022789 Antitoxin ParD C4901_11205 8a929e7950bc623415862cc6d4fdc26e 81 Gene3D G3DSA:1.10.8.1250 11 79 1.9E-11 T 14-10-2018 IPR038296 Antitoxin ParD superfamily C4901_11205 8a929e7950bc623415862cc6d4fdc26e 81 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 13 63 1.4E-6 T 14-10-2018 IPR022789 Antitoxin ParD C4901_00805 37c38a9256264928ddc199adee260c67 448 Gene3D G3DSA:3.30.70.1170 189 245 1.5E-14 T 14-10-2018 C4901_00805 37c38a9256264928ddc199adee260c67 448 Gene3D G3DSA:1.10.287.730 161 186 5.3E-6 T 14-10-2018 C4901_00805 37c38a9256264928ddc199adee260c67 448 SUPERFAMILY SSF48013 32 164 3.27E-19 T 14-10-2018 IPR035926 NusB-like superfamily C4901_00805 37c38a9256264928ddc199adee260c67 448 Pfam PF01189 16S rRNA methyltransferase RsmB/F 256 444 1.4E-54 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 C4901_00805 37c38a9256264928ddc199adee260c67 448 Pfam PF01029 NusB family 50 146 1.4E-12 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 C4901_00805 37c38a9256264928ddc199adee260c67 448 SUPERFAMILY SSF53335 155 446 1.56E-71 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_00805 37c38a9256264928ddc199adee260c67 448 Gene3D G3DSA:3.40.50.150 246 447 3.6E-60 T 14-10-2018 C4901_00805 37c38a9256264928ddc199adee260c67 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 381 397 4.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_00805 37c38a9256264928ddc199adee260c67 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 331 343 4.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_00805 37c38a9256264928ddc199adee260c67 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 251 4.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_00805 37c38a9256264928ddc199adee260c67 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 266 276 4.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_00805 37c38a9256264928ddc199adee260c67 448 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 429 446 4.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase C4901_00805 37c38a9256264928ddc199adee260c67 448 Gene3D G3DSA:1.10.940.10 26 158 2.2E-21 T 14-10-2018 IPR035926 NusB-like superfamily C4901_00805 37c38a9256264928ddc199adee260c67 448 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 51 448 1.4E-96 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 C4901_14865 41c18d0535d01d11a9065f80fda5ee66 201 SUPERFAMILY SSF48371 62 193 1.17E-19 T 14-10-2018 IPR016024 Armadillo-type fold C4901_14865 41c18d0535d01d11a9065f80fda5ee66 201 Gene3D G3DSA:1.25.10.10 1 198 1.1E-45 T 14-10-2018 IPR011989 Armadillo-like helical C4901_04695 2703abb54323fc687596e3ce96d3ef28 162 Pfam PF02635 DsrE/DsrF-like family 60 161 1.4E-6 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_04695 2703abb54323fc687596e3ce96d3ef28 162 Gene3D G3DSA:3.40.1260.10 46 162 9.8E-27 T 14-10-2018 IPR027396 DsrEFH-like C4901_04695 2703abb54323fc687596e3ce96d3ef28 162 SUPERFAMILY SSF75169 49 162 8.24E-21 T 14-10-2018 IPR027396 DsrEFH-like C4901_14145 2c9d81b38c719dcb288ce464068f61e2 156 SUPERFAMILY SSF47973 2 149 2.62E-58 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily C4901_14145 2c9d81b38c719dcb288ce464068f61e2 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.6E-64 T 14-10-2018 IPR023798 Ribosomal protein S7 domain C4901_14145 2c9d81b38c719dcb288ce464068f61e2 156 Gene3D G3DSA:1.10.455.10 2 155 5.8E-59 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily C4901_14145 2c9d81b38c719dcb288ce464068f61e2 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.4E-65 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 C4901_14145 2c9d81b38c719dcb288ce464068f61e2 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14145 2c9d81b38c719dcb288ce464068f61e2 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.617 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 C4901_14145 2c9d81b38c719dcb288ce464068f61e2 156 PIRSF PIRSF002122 3 156 9.4E-57 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 PRINTS PR00773 GrpE protein signature 61 77 1.3E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 PRINTS PR00773 GrpE protein signature 172 191 1.3E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 PRINTS PR00773 GrpE protein signature 89 104 1.3E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 PRINTS PR00773 GrpE protein signature 145 160 1.3E-24 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 Hamap MF_01151 Protein GrpE [grpE]. 9 193 19.973 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 Gene3D G3DSA:3.90.20.20 30 136 8.4E-25 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 SUPERFAMILY SSF51064 138 195 5.62E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 SUPERFAMILY SSF58014 41 136 1.96E-22 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 Gene3D G3DSA:2.30.22.10 137 193 2.0E-23 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 Pfam PF01025 GrpE 31 193 1.2E-48 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C4901_04475 767f09bbc70206cce67553d9e9763cb7 196 ProSitePatterns PS01071 grpE protein signature. 148 191 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 C4901_02720 3af83e30c0f364a8fc7932583564a2c4 323 Pfam PF02562 PhoH-like protein 110 313 1.3E-91 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 C4901_02720 3af83e30c0f364a8fc7932583564a2c4 323 SUPERFAMILY SSF52540 106 288 3.97E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02720 3af83e30c0f364a8fc7932583564a2c4 323 Gene3D G3DSA:3.40.50.300 107 313 5.1E-72 T 14-10-2018 C4901_05605 9faf3cf5a6795f5b303e9defb79efa44 287 Gene3D G3DSA:3.40.250.10 2 149 3.6E-45 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_05605 9faf3cf5a6795f5b303e9defb79efa44 287 SUPERFAMILY SSF52821 174 286 5.37E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_05605 9faf3cf5a6795f5b303e9defb79efa44 287 SMART SM00450 8 135 4.3E-13 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_05605 9faf3cf5a6795f5b303e9defb79efa44 287 SMART SM00450 161 281 3.2E-7 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_05605 9faf3cf5a6795f5b303e9defb79efa44 287 Pfam PF00581 Rhodanese-like domain 174 277 1.8E-9 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_05605 9faf3cf5a6795f5b303e9defb79efa44 287 Pfam PF00581 Rhodanese-like domain 10 131 1.3E-14 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_05605 9faf3cf5a6795f5b303e9defb79efa44 287 SUPERFAMILY SSF52821 6 150 4.32E-38 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_05605 9faf3cf5a6795f5b303e9defb79efa44 287 Gene3D G3DSA:3.40.250.10 165 286 3.9E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_08000 76a9380ecc9259e485d40add172e7f63 405 SUPERFAMILY SSF52374 10 402 1.35E-86 T 14-10-2018 C4901_08000 76a9380ecc9259e485d40add172e7f63 405 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 21 37 1.9E-19 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C4901_08000 76a9380ecc9259e485d40add172e7f63 405 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 72 91 1.9E-19 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C4901_08000 76a9380ecc9259e485d40add172e7f63 405 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 1.9E-19 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C4901_08000 76a9380ecc9259e485d40add172e7f63 405 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 9 187 1.8E-56 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 C4901_08000 76a9380ecc9259e485d40add172e7f63 405 Pfam PF00579 tRNA synthetases class I (W and Y) 9 175 1.4E-50 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_08000 76a9380ecc9259e485d40add172e7f63 405 Pfam PF00579 tRNA synthetases class I (W and Y) 230 357 1.6E-11 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_08000 76a9380ecc9259e485d40add172e7f63 405 Gene3D G3DSA:1.10.240.10 265 370 1.2E-39 T 14-10-2018 C4901_08000 76a9380ecc9259e485d40add172e7f63 405 Gene3D G3DSA:3.40.50.620 9 239 4.9E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 262 1.3E-37 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 263 30.319 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 PIRSF PIRSF000161 1 265 8.8E-79 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 Gene3D G3DSA:3.30.360.10 126 232 2.1E-89 T 14-10-2018 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 3.3E-32 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 SUPERFAMILY SSF55347 126 234 3.92E-30 T 14-10-2018 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 263 1.7E-79 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 Gene3D G3DSA:3.40.50.720 4 262 2.1E-89 T 14-10-2018 C4901_04495 3442c8224d2457708d1ec967f3686bd1 265 SUPERFAMILY SSF51735 1 264 4.26E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_06785 9d8301591b3d6cdd4bc0aaea781bc68d 100 Pfam PF04077 DsrH like protein 7 95 9.0E-25 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 C4901_06785 9d8301591b3d6cdd4bc0aaea781bc68d 100 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 99 7.0E-28 T 14-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 C4901_06785 9d8301591b3d6cdd4bc0aaea781bc68d 100 SUPERFAMILY SSF75169 1 99 3.01E-28 T 14-10-2018 IPR027396 DsrEFH-like C4901_06785 9d8301591b3d6cdd4bc0aaea781bc68d 100 Gene3D G3DSA:3.40.1260.10 1 100 1.1E-32 T 14-10-2018 IPR027396 DsrEFH-like C4901_00120 8342fdea2c1ef28ce06d927dac2daa6a 251 Pfam PF01738 Dienelactone hydrolase family 26 244 8.1E-42 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 C4901_00120 8342fdea2c1ef28ce06d927dac2daa6a 251 SUPERFAMILY SSF53474 24 244 2.7E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_00120 8342fdea2c1ef28ce06d927dac2daa6a 251 Gene3D G3DSA:3.40.50.1820 16 246 8.7E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_06980 ea6a93c29e36468ba0b39ef6d866f670 435 Gene3D G3DSA:2.60.40.10 325 435 7.3E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_06980 ea6a93c29e36468ba0b39ef6d866f670 435 SUPERFAMILY SSF81296 329 430 3.36E-14 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_06980 ea6a93c29e36468ba0b39ef6d866f670 435 Gene3D G3DSA:2.70.98.10 80 324 1.5E-14 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 C4901_06980 ea6a93c29e36468ba0b39ef6d866f670 435 SUPERFAMILY SSF74650 82 323 4.08E-13 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 C4901_06980 ea6a93c29e36468ba0b39ef6d866f670 435 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 151 427 5.5E-29 T 14-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 487 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 520 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 501 2.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 433 537 1.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 SUPERFAMILY SSF47384 316 389 2.35E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 Pfam PF00512 His Kinase A (phospho-acceptor) domain 327 390 2.9E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 Gene3D G3DSA:3.30.565.10 390 542 1.1E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 SMART SM00387 432 541 5.5E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 Gene3D G3DSA:1.10.287.130 312 389 3.7E-17 T 14-10-2018 C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 SMART SM00388 325 391 1.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_05100 a91ce9fe4b30bb0c5cc5ed69346e4d5e 550 SUPERFAMILY SSF55874 397 537 3.67E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_09915 a8f655d705add017663d5ec733043825 340 Gene3D G3DSA:1.10.1740.10 142 219 7.1E-16 T 14-10-2018 C4901_09915 a8f655d705add017663d5ec733043825 340 Gene3D G3DSA:1.10.10.10 272 333 2.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_09915 a8f655d705add017663d5ec733043825 340 SUPERFAMILY SSF88946 148 228 1.92E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C4901_09915 a8f655d705add017663d5ec733043825 340 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 160 329 3.2E-19 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C4901_09915 a8f655d705add017663d5ec733043825 340 SUPERFAMILY SSF88659 269 330 4.49E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_09915 a8f655d705add017663d5ec733043825 340 Pfam PF08281 Sigma-70, region 4 275 325 1.3E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_09915 a8f655d705add017663d5ec733043825 340 Pfam PF04542 Sigma-70 region 2 160 223 7.1E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C4901_08060 5b24e632a2c29ce88b5ebdc4c86c705d 329 Pfam PF01734 Patatin-like phospholipase 11 172 3.0E-19 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 C4901_08060 5b24e632a2c29ce88b5ebdc4c86c705d 329 Gene3D G3DSA:3.40.1090.10 94 194 3.9E-12 T 14-10-2018 C4901_08060 5b24e632a2c29ce88b5ebdc4c86c705d 329 Gene3D G3DSA:3.40.1090.20 8 93 1.2E-8 T 14-10-2018 C4901_08060 5b24e632a2c29ce88b5ebdc4c86c705d 329 SUPERFAMILY SSF52151 10 185 2.56E-43 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase C4901_06890 bc0b5488c3733fbeed71336bf339566a 174 SUPERFAMILY SSF55729 21 145 6.53E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_06890 bc0b5488c3733fbeed71336bf339566a 174 Gene3D G3DSA:3.40.630.30 3 161 4.7E-39 T 14-10-2018 C4901_07200 20aed260333f66670f1ea9af3fbf820f 167 Gene3D G3DSA:2.60.40.10 82 167 7.1E-15 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_07200 20aed260333f66670f1ea9af3fbf820f 167 Pfam PF16561 Glycogen recognition site of AMP-activated protein kinase 96 165 1.2E-11 T 14-10-2018 IPR032640 AMP-activated protein kinase, glycogen-binding domain Reactome: R-HSA-1445148|Reactome: R-HSA-1632852|Reactome: R-HSA-2151209|Reactome: R-HSA-380972|Reactome: R-HSA-5628897|Reactome: R-HSA-6804756 C4901_07200 20aed260333f66670f1ea9af3fbf820f 167 SUPERFAMILY SSF81296 88 165 1.26E-16 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_04085 0a4efd0a412b7c458ff1d9367ca2bed2 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 11 337 2.3E-131 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_04085 0a4efd0a412b7c458ff1d9367ca2bed2 345 Gene3D G3DSA:3.30.1330.10 10 173 1.4E-64 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_04085 0a4efd0a412b7c458ff1d9367ca2bed2 345 SUPERFAMILY SSF55326 10 173 6.88E-51 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_04085 0a4efd0a412b7c458ff1d9367ca2bed2 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 179 341 3.4E-34 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C4901_04085 0a4efd0a412b7c458ff1d9367ca2bed2 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 64 167 3.0E-14 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C4901_04085 0a4efd0a412b7c458ff1d9367ca2bed2 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 10 344 45.091 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_04085 0a4efd0a412b7c458ff1d9367ca2bed2 345 Gene3D G3DSA:3.90.650.10 174 342 3.6E-64 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_04085 0a4efd0a412b7c458ff1d9367ca2bed2 345 SUPERFAMILY SSF56042 174 342 7.48E-57 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 Gene3D G3DSA:1.10.287.110 12 122 5.2E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 PRINTS PR00625 DnaJ domain signature 53 73 1.1E-31 T 14-10-2018 IPR001623 DnaJ domain C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 PRINTS PR00625 DnaJ domain signature 18 36 1.1E-31 T 14-10-2018 IPR001623 DnaJ domain C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 PRINTS PR00625 DnaJ domain signature 73 92 1.1E-31 T 14-10-2018 IPR001623 DnaJ domain C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 PRINTS PR00625 DnaJ domain signature 36 51 1.1E-31 T 14-10-2018 IPR001623 DnaJ domain C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 Gene3D G3DSA:2.60.260.20 264 370 2.7E-25 T 14-10-2018 C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 SUPERFAMILY SSF49493 268 354 3.79E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 16 358 1.1E-130 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 13 382 40.147 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 Pfam PF00684 DnaJ central domain 157 217 2.2E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 Pfam PF01556 DnaJ C terminal domain 131 343 2.4E-41 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 SUPERFAMILY SSF46565 11 120 1.57E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 Pfam PF00226 DnaJ domain 16 78 1.1E-27 T 14-10-2018 IPR001623 DnaJ domain C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 Gene3D G3DSA:2.10.230.10 157 217 8.6E-36 T 14-10-2018 C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 SUPERFAMILY SSF57938 144 220 1.57E-20 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 SMART SM00271 15 73 2.7E-32 T 14-10-2018 IPR001623 DnaJ domain C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 Gene3D G3DSA:2.60.260.20 127 259 8.6E-36 T 14-10-2018 C4901_04485 4f29a497b934d36e592451f294e9d4a7 392 SUPERFAMILY SSF49493 125 277 1.02E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 C4901_17090 a75b9603b30f76a600ee83c1c5d9d24a 301 Gene3D G3DSA:1.10.8.300 201 299 1.6E-21 T 14-10-2018 C4901_17090 a75b9603b30f76a600ee83c1c5d9d24a 301 Gene3D G3DSA:3.40.50.300 3 200 2.2E-40 T 14-10-2018 C4901_17090 a75b9603b30f76a600ee83c1c5d9d24a 301 PIRSF PIRSF002849 2 298 7.5E-113 T 14-10-2018 C4901_17090 a75b9603b30f76a600ee83c1c5d9d24a 301 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 37 167 1.0E-58 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 C4901_17090 a75b9603b30f76a600ee83c1c5d9d24a 301 SUPERFAMILY SSF52540 25 282 1.66E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_17125 1a9f12ab96df0eb01da519fcad246adc 121 Gene3D G3DSA:3.30.230.10 4 120 1.6E-31 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_17125 1a9f12ab96df0eb01da519fcad246adc 121 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 18 95 5.0E-12 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C4901_17125 1a9f12ab96df0eb01da519fcad246adc 121 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 58 72 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 C4901_17125 1a9f12ab96df0eb01da519fcad246adc 121 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 8 120 16.81 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C4901_17125 1a9f12ab96df0eb01da519fcad246adc 121 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 11 117 9.5E-26 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C4901_17125 1a9f12ab96df0eb01da519fcad246adc 121 Pfam PF00825 Ribonuclease P 8 114 5.4E-26 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 C4901_17125 1a9f12ab96df0eb01da519fcad246adc 121 SUPERFAMILY SSF54211 8 118 1.21E-26 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_04925 83023ae3ac91a10c6a8e09140c7e489b 511 TIGRFAM TIGR02398 gluc_glyc_Psyn: glucosylglycerol-phosphate synthase 8 488 1.8E-192 T 14-10-2018 IPR012764 Glucosylglycerol-phosphate synthase GO:0016758|GO:0051473 MetaCyc: PWY-7902 C4901_04925 83023ae3ac91a10c6a8e09140c7e489b 511 Pfam PF00982 Glycosyltransferase family 20 5 486 8.3E-136 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 C4901_04925 83023ae3ac91a10c6a8e09140c7e489b 511 Gene3D G3DSA:3.40.50.2000 33 484 6.9E-139 T 14-10-2018 C4901_04925 83023ae3ac91a10c6a8e09140c7e489b 511 Gene3D G3DSA:3.40.50.2000 266 473 6.9E-139 T 14-10-2018 C4901_04925 83023ae3ac91a10c6a8e09140c7e489b 511 SUPERFAMILY SSF53756 5 490 9.94E-126 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Gene3D G3DSA:1.10.10.1100 423 477 1.3E-9 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 680 696 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 3.1E-12 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 3.1E-12 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.1E-12 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 237 251 3.1E-12 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00397 Sirohaem Fe-binding site signature 680 698 3.0E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00397 Sirohaem Fe-binding site signature 637 655 3.0E-7 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 SUPERFAMILY SSF55124 524 625 1.54E-22 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 11 796 8.0E-277 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 SUPERFAMILY SSF51905 9 193 7.95E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 563 624 5.2E-12 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PIRSF PIRSF037149 3 805 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 SUPERFAMILY SSF51905 145 311 1.31E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Gene3D G3DSA:3.50.50.60 120 243 3.0E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 472 7.4E-14 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Pfam PF04324 BFD-like [2Fe-2S] binding domain 489 538 2.9E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Gene3D G3DSA:3.50.50.60 12 307 3.0E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Gene3D G3DSA:3.90.480.10 572 634 2.1E-5 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.6E-16 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.6E-16 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 1.6E-16 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 1.6E-16 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 1.6E-16 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 284 8.1E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Gene3D G3DSA:3.30.413.10 635 797 1.3E-38 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 SUPERFAMILY SSF56014 634 797 7.07E-51 T 14-10-2018 C4901_05885 1e408a3d82295047a2ec49910149ff30 814 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 769 7.7E-28 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 C4901_01420 aeff23ca0a9d66a1df0a71b34505a33b 276 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 79 169 1.5E-39 T 14-10-2018 IPR012997 Rare lipoprotein A C4901_01420 aeff23ca0a9d66a1df0a71b34505a33b 276 Gene3D G3DSA:3.30.70.1070 201 275 4.2E-9 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C4901_01420 aeff23ca0a9d66a1df0a71b34505a33b 276 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 40 169 22.819 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 C4901_01420 aeff23ca0a9d66a1df0a71b34505a33b 276 Gene3D G3DSA:2.40.40.10 76 169 8.6E-35 T 14-10-2018 IPR036908 RlpA-like domain superfamily C4901_01420 aeff23ca0a9d66a1df0a71b34505a33b 276 Pfam PF03330 Lytic transglycolase 77 166 1.6E-25 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain C4901_01420 aeff23ca0a9d66a1df0a71b34505a33b 276 SUPERFAMILY SSF110997 201 270 4.71E-11 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C4901_01420 aeff23ca0a9d66a1df0a71b34505a33b 276 Pfam PF05036 Sporulation related domain 199 267 1.5E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C4901_01420 aeff23ca0a9d66a1df0a71b34505a33b 276 SUPERFAMILY SSF50685 75 165 9.07E-9 T 14-10-2018 IPR036908 RlpA-like domain superfamily C4901_13825 57ebeb3258b23a53126439497ad6c48e 243 Gene3D G3DSA:1.10.10.200 1 80 3.3E-35 T 14-10-2018 IPR017856 Integrase-like, N-terminal C4901_13825 57ebeb3258b23a53126439497ad6c48e 243 Gene3D G3DSA:3.30.70.980 86 235 1.1E-51 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_13825 57ebeb3258b23a53126439497ad6c48e 243 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 35.484 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_13825 57ebeb3258b23a53126439497ad6c48e 243 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 2.2E-94 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_13825 57ebeb3258b23a53126439497ad6c48e 243 Gene3D G3DSA:3.30.70.980 130 204 1.1E-51 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_13825 57ebeb3258b23a53126439497ad6c48e 243 Pfam PF01709 Transcriptional regulator 5 236 2.4E-90 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_13825 57ebeb3258b23a53126439497ad6c48e 243 SUPERFAMILY SSF75625 3 241 6.8E-92 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_08770 6c5954d1a1ede96aad341355a2650a7e 371 Gene3D G3DSA:3.30.390.10 23 123 5.7E-115 T 14-10-2018 IPR029017 Enolase-like, N-terminal C4901_08770 6c5954d1a1ede96aad341355a2650a7e 371 SUPERFAMILY SSF51604 119 370 3.28E-60 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C4901_08770 6c5954d1a1ede96aad341355a2650a7e 371 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 106 131 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 C4901_08770 6c5954d1a1ede96aad341355a2650a7e 371 Gene3D G3DSA:3.20.20.120 124 359 5.7E-115 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily C4901_08770 6c5954d1a1ede96aad341355a2650a7e 371 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 36 131 1.5E-14 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain C4901_08770 6c5954d1a1ede96aad341355a2650a7e 371 SUPERFAMILY SSF54826 13 132 4.39E-27 T 14-10-2018 C4901_08770 6c5954d1a1ede96aad341355a2650a7e 371 Pfam PF13378 Enolase C-terminal domain-like 153 362 1.7E-55 T 14-10-2018 IPR029065 Enolase C-terminal domain-like C4901_08770 6c5954d1a1ede96aad341355a2650a7e 371 SMART SM00922 150 246 6.8E-18 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal C4901_08605 1b3b0e3e585b8b752aca8d8be995940a 515 Gene3D G3DSA:1.10.645.20 161 514 9.0E-92 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08605 1b3b0e3e585b8b752aca8d8be995940a 515 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 287 438 3.4E-26 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08605 1b3b0e3e585b8b752aca8d8be995940a 515 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 25 137 1.5E-10 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08605 1b3b0e3e585b8b752aca8d8be995940a 515 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 136 2.0E-4 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08605 1b3b0e3e585b8b752aca8d8be995940a 515 SUPERFAMILY SSF143243 21 174 4.05E-23 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08605 1b3b0e3e585b8b752aca8d8be995940a 515 SUPERFAMILY SSF56762 170 514 2.75E-81 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_09525 af69f08542fb4d7850f376758726f69c 166 SMART SM00226 29 158 7.1E-33 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C4901_09525 af69f08542fb4d7850f376758726f69c 166 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 29 156 2.4E-29 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C4901_09525 af69f08542fb4d7850f376758726f69c 166 Gene3D G3DSA:3.40.50.2300 24 163 8.7E-41 T 14-10-2018 C4901_09525 af69f08542fb4d7850f376758726f69c 166 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 55 71 4.3E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C4901_09525 af69f08542fb4d7850f376758726f69c 166 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 130 145 4.3E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C4901_09525 af69f08542fb4d7850f376758726f69c 166 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 89 104 4.3E-15 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C4901_09525 af69f08542fb4d7850f376758726f69c 166 SUPERFAMILY SSF52788 31 158 1.96E-35 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily C4901_14590 b577c7216043ca3c83b7e9a5b5671c3f 266 SUPERFAMILY SSF53681 6 107 3.53E-33 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C4901_14590 b577c7216043ca3c83b7e9a5b5671c3f 266 Hamap MF_00258 Glutamate racemase [murI]. 5 257 35.738 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C4901_14590 b577c7216043ca3c83b7e9a5b5671c3f 266 Gene3D G3DSA:3.40.50.1860 96 208 3.9E-89 T 14-10-2018 C4901_14590 b577c7216043ca3c83b7e9a5b5671c3f 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 247 1.3E-67 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C4901_14590 b577c7216043ca3c83b7e9a5b5671c3f 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 215 5.5E-33 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C4901_14590 b577c7216043ca3c83b7e9a5b5671c3f 266 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C4901_14590 b577c7216043ca3c83b7e9a5b5671c3f 266 SUPERFAMILY SSF53681 110 264 9.81E-41 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 C4901_14590 b577c7216043ca3c83b7e9a5b5671c3f 266 Gene3D G3DSA:3.40.50.1860 5 249 3.9E-89 T 14-10-2018 C4901_09500 2255fc3f369497c645c9f7b23061bad1 114 Pfam PF00355 Rieske [2Fe-2S] domain 23 93 6.8E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 C4901_09500 2255fc3f369497c645c9f7b23061bad1 114 Gene3D G3DSA:2.102.10.10 5 114 2.5E-16 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C4901_09500 2255fc3f369497c645c9f7b23061bad1 114 SUPERFAMILY SSF50022 7 109 8.64E-22 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 C4901_07625 be454d0985f599feea0ce704b33d631c 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 42 53 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_07625 be454d0985f599feea0ce704b33d631c 160 Pfam PF13187 4Fe-4S dicluster domain 9 57 1.1E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_07625 be454d0985f599feea0ce704b33d631c 160 Pfam PF12139 Adenosine-5'-phosphosulfate reductase beta subunit 59 143 2.4E-36 T 14-10-2018 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal C4901_07625 be454d0985f599feea0ce704b33d631c 160 Gene3D G3DSA:3.30.70.20 2 62 2.9E-23 T 14-10-2018 C4901_07625 be454d0985f599feea0ce704b33d631c 160 Gene3D G3DSA:3.30.720.40 63 146 4.3E-16 T 14-10-2018 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily C4901_07625 be454d0985f599feea0ce704b33d631c 160 SUPERFAMILY SSF54862 4 81 5.84E-22 T 14-10-2018 C4901_07625 be454d0985f599feea0ce704b33d631c 160 TIGRFAM TIGR02060 aprB: adenylylsulfate reductase, beta subunit 1 133 3.5E-64 T 14-10-2018 IPR011802 Adenylylsulphate reductase, beta subunit C4901_07625 be454d0985f599feea0ce704b33d631c 160 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_15915 7eb1c564b965dcc1114ba4e7d4d7b37d 165 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 C4901_15915 7eb1c564b965dcc1114ba4e7d4d7b37d 165 SUPERFAMILY SSF52833 1 162 1.3E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_15915 7eb1c564b965dcc1114ba4e7d4d7b37d 165 Pfam PF08534 Redoxin 19 161 1.6E-25 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 C4901_15915 7eb1c564b965dcc1114ba4e7d4d7b37d 165 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 35.795 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 C4901_15915 7eb1c564b965dcc1114ba4e7d4d7b37d 165 Gene3D G3DSA:3.40.30.10 1 165 2.2E-46 T 14-10-2018 C4901_05955 f4fb8f10b58f8374cf727219851afecc 396 Pfam PF01757 Acyltransferase family 7 366 1.5E-31 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 C4901_10380 df9d052b976339af814b73d7edb47238 256 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 1 256 44.356 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C4901_10380 df9d052b976339af814b73d7edb47238 256 PIRSF PIRSF000456 1 256 4.4E-101 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C4901_10380 df9d052b976339af814b73d7edb47238 256 SUPERFAMILY SSF51161 1 256 2.64E-80 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_10380 df9d052b976339af814b73d7edb47238 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 30 56 1.8E-6 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10380 df9d052b976339af814b73d7edb47238 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 1 27 1.7E-4 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10380 df9d052b976339af814b73d7edb47238 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 138 167 0.0014 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10380 df9d052b976339af814b73d7edb47238 256 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 103 136 6.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10380 df9d052b976339af814b73d7edb47238 256 Gene3D G3DSA:2.160.10.10 1 188 1.9E-54 T 14-10-2018 C4901_10380 df9d052b976339af814b73d7edb47238 256 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 2 254 4.2E-101 T 14-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 C4901_10380 df9d052b976339af814b73d7edb47238 256 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 174 255 1.1E-28 T 14-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 C4901_10380 df9d052b976339af814b73d7edb47238 256 Gene3D G3DSA:1.20.1180.10 191 256 1.8E-23 T 14-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 C4901_02740 2bab9f63142e10e881c6771a0c795085 558 Pfam PF13808 DDE_Tnp_1-associated 332 424 2.5E-20 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_02740 2bab9f63142e10e881c6771a0c795085 558 Pfam PF14236 Domain of unknown function (DUF4338) 161 304 4.7E-40 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_01665 facba2808a50a8d6a93cf50f62754d53 192 SUPERFAMILY SSF100950 3 187 1.67E-45 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C4901_01665 facba2808a50a8d6a93cf50f62754d53 192 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 181 8.1E-38 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C4901_01665 facba2808a50a8d6a93cf50f62754d53 192 PIRSF PIRSF006806 1 184 1.6E-28 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C4901_01665 facba2808a50a8d6a93cf50f62754d53 192 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 181 1.7E-31 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase C4901_01665 facba2808a50a8d6a93cf50f62754d53 192 Gene3D G3DSA:3.40.50.10420 3 192 4.7E-45 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily C4901_15645 13dc843ea13be50d77e6a01fc560cba6 315 Gene3D G3DSA:1.10.3720.10 85 308 2.0E-14 T 14-10-2018 IPR035906 MetI-like superfamily C4901_15645 13dc843ea13be50d77e6a01fc560cba6 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 314 9.9E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C4901_15645 13dc843ea13be50d77e6a01fc560cba6 315 SUPERFAMILY SSF161098 91 296 3.01E-13 T 14-10-2018 IPR035906 MetI-like superfamily C4901_11730 63f732cc79383fdba390ed14614b6b27 219 PIRSF PIRSF000705 4 209 6.6E-51 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 C4901_11730 63f732cc79383fdba390ed14614b6b27 219 Pfam PF01712 Deoxynucleoside kinase 11 202 2.7E-34 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain C4901_11730 63f732cc79383fdba390ed14614b6b27 219 Gene3D G3DSA:3.40.50.300 10 204 2.6E-43 T 14-10-2018 C4901_11730 63f732cc79383fdba390ed14614b6b27 219 SUPERFAMILY SSF52540 9 212 9.41E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16235 e14e9197fd26136bb5ada71312af5df1 408 SUPERFAMILY SSF56954 2 396 3.53E-55 T 14-10-2018 C4901_16235 e14e9197fd26136bb5ada71312af5df1 408 Gene3D G3DSA:1.20.1600.10 7 399 6.8E-49 T 14-10-2018 C4901_16235 e14e9197fd26136bb5ada71312af5df1 408 Pfam PF02321 Outer membrane efflux protein 226 384 4.7E-19 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_16235 e14e9197fd26136bb5ada71312af5df1 408 Pfam PF02321 Outer membrane efflux protein 17 198 5.0E-19 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_05450 21cc2ceb0c568be62d375e4bc2df5c8d 135 Gene3D G3DSA:2.60.120.10 21 97 1.9E-5 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_05450 21cc2ceb0c568be62d375e4bc2df5c8d 135 SUPERFAMILY SSF51182 35 123 4.65E-8 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_00680 5e64de605b8c84c9668ba8b9e6fc8507 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_00680 5e64de605b8c84c9668ba8b9e6fc8507 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 424 9.8E-180 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 C4901_00680 5e64de605b8c84c9668ba8b9e6fc8507 428 Pfam PF00202 Aminotransferase class-III 33 393 5.5E-72 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_00680 5e64de605b8c84c9668ba8b9e6fc8507 428 SUPERFAMILY SSF53383 2 424 2.53E-129 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_00680 5e64de605b8c84c9668ba8b9e6fc8507 428 Gene3D G3DSA:3.90.1150.10 8 417 1.8E-172 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_00680 5e64de605b8c84c9668ba8b9e6fc8507 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 425 99.45 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 C4901_00680 5e64de605b8c84c9668ba8b9e6fc8507 428 Gene3D G3DSA:3.40.640.10 69 317 1.8E-172 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 SUPERFAMILY SSF49503 43 191 1.77E-15 T 14-10-2018 IPR008972 Cupredoxin C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 168 185 - T 14-10-2018 IPR028871 Blue (type 1) copper protein, binding site C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 ProSitePatterns PS00079 Multicopper oxidases signature 1. 169 189 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 PRINTS PR00158 Rusticyanin signature 94 113 2.5E-38 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 PRINTS PR00158 Rusticyanin signature 141 159 2.5E-38 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 PRINTS PR00158 Rusticyanin signature 75 92 2.5E-38 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 PRINTS PR00158 Rusticyanin signature 115 134 2.5E-38 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 PRINTS PR00158 Rusticyanin signature 53 73 2.5E-38 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 PRINTS PR00158 Rusticyanin signature 162 184 2.5E-38 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 155 192 1.6E-4 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 C4901_13955 ef8e53acf95b93852320eb2d5448a56c 192 Gene3D G3DSA:2.60.40.420 40 192 3.7E-38 T 14-10-2018 IPR008972 Cupredoxin C4901_16460 4ae55b969546c6e72810a84a2237248f 88 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 10 50 1.2E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_16460 4ae55b969546c6e72810a84a2237248f 88 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 9 48 1.3E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_16460 4ae55b969546c6e72810a84a2237248f 88 Gene3D G3DSA:2.10.260.10 9 51 3.8E-6 T 14-10-2018 C4901_16460 4ae55b969546c6e72810a84a2237248f 88 SMART SM00966 9 54 3.9E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_16460 4ae55b969546c6e72810a84a2237248f 88 SUPERFAMILY SSF89447 10 69 1.7E-8 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_15270 b05cc6125855215da1624a44c2a82acc 88 Gene3D G3DSA:3.10.450.530 1 84 2.2E-17 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily C4901_15270 b05cc6125855215da1624a44c2a82acc 88 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 5 82 1.7E-26 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 SMART SM00434 11 498 8.2E-281 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 7 843 24.056 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 686 6.7E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 539 582 1.9E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 1.4E-14 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 795 840 3.7E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 746 790 1.4E-12 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 636 2.6E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 SUPERFAMILY SSF101904 532 845 4.05E-103 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 842 0.0 T 14-10-2018 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Gene3D G3DSA:3.30.1360.40 236 333 6.9E-226 T 14-10-2018 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Gene3D G3DSA:3.90.199.10 33 520 6.9E-226 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Gene3D G3DSA:2.120.10.90 530 843 1.1E-118 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 1.7E-153 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 SUPERFAMILY SSF56719 30 520 1.31E-178 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C4901_12095 a6ff4e6a1b80b0b2d2f61712e0c0d769 868 Gene3D G3DSA:1.10.268.10 370 492 6.9E-226 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C4901_06685 b519388a60633f9a7b58ee8a2260a53b 388 Gene3D G3DSA:3.40.50.2000 182 363 6.4E-57 T 14-10-2018 C4901_06685 b519388a60633f9a7b58ee8a2260a53b 388 Pfam PF00534 Glycosyl transferases group 1 202 361 2.1E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_06685 b519388a60633f9a7b58ee8a2260a53b 388 Pfam PF13439 Glycosyltransferase Family 4 23 182 5.6E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C4901_06685 b519388a60633f9a7b58ee8a2260a53b 388 SUPERFAMILY SSF53756 14 379 2.08E-71 T 14-10-2018 C4901_06685 b519388a60633f9a7b58ee8a2260a53b 388 Gene3D G3DSA:3.40.50.2000 22 377 6.4E-57 T 14-10-2018 C4901_16885 0e19d90349a5f8238101b6db4e19fcdf 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 185 1.5E-58 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 C4901_16885 0e19d90349a5f8238101b6db4e19fcdf 195 SUPERFAMILY SSF52540 11 190 8.65E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16885 0e19d90349a5f8238101b6db4e19fcdf 195 Gene3D G3DSA:3.40.50.300 3 192 1.8E-45 T 14-10-2018 C4901_16885 0e19d90349a5f8238101b6db4e19fcdf 195 Pfam PF01926 50S ribosome-binding GTPase 26 142 1.1E-19 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_16885 0e19d90349a5f8238101b6db4e19fcdf 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 12 190 25.005 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 Gene3D G3DSA:3.30.450.20 225 358 3.3E-12 T 14-10-2018 C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 Pfam PF00563 EAL domain 664 898 4.5E-72 T 14-10-2018 IPR001633 EAL domain C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 231 349 2.5E-6 T 14-10-2018 IPR000014 PAS domain C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 SUPERFAMILY SSF55073 492 649 4.63E-47 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 SUPERFAMILY SSF141868 664 911 2.75E-86 T 14-10-2018 IPR035919 EAL domain superfamily C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 Gene3D G3DSA:3.30.70.270 481 661 1.1E-58 T 14-10-2018 C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 Gene3D G3DSA:3.20.20.450 662 920 1.8E-97 T 14-10-2018 IPR035919 EAL domain superfamily C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 484 646 5.0E-41 T 14-10-2018 IPR000160 GGDEF domain C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 SUPERFAMILY SSF55785 227 345 6.81E-12 T 14-10-2018 IPR035965 PAS domain superfamily C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 SMART SM00052 658 903 1.8E-104 T 14-10-2018 IPR001633 EAL domain C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 Pfam PF08448 PAS fold 240 349 2.7E-7 T 14-10-2018 IPR013656 PAS fold-4 C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 SMART SM00267 476 648 6.7E-60 T 14-10-2018 IPR000160 GGDEF domain C4901_07850 b7896343fa37c60ba5b198fe1ec14078 934 Pfam PF00990 Diguanylate cyclase, GGDEF domain 487 644 2.4E-48 T 14-10-2018 IPR000160 GGDEF domain C4901_13445 17f723d9cefeea64b027382cf19d06f1 210 Pfam PF14681 Uracil phosphoribosyltransferase 7 209 1.6E-72 T 14-10-2018 C4901_13445 17f723d9cefeea64b027382cf19d06f1 210 SUPERFAMILY SSF53271 6 208 5.77E-70 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C4901_13445 17f723d9cefeea64b027382cf19d06f1 210 Gene3D G3DSA:3.40.50.2020 4 209 1.2E-78 T 14-10-2018 C4901_13445 17f723d9cefeea64b027382cf19d06f1 210 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 5 209 4.0E-81 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 C4901_13445 17f723d9cefeea64b027382cf19d06f1 210 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 4 210 44.119 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.1E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.1E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.1E-17 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 SUPERFAMILY SSF55594 1 88 6.28E-29 T 14-10-2018 IPR035895 HPr-like superfamily C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 Pfam PF00381 PTS HPr component phosphorylation site 4 82 1.1E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.8E-29 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like C4901_02965 71c8f975cd9b13c02d004b3d0d41825a 89 Gene3D G3DSA:3.30.1340.10 1 88 1.1E-32 T 14-10-2018 IPR035895 HPr-like superfamily C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 Gene3D G3DSA:3.10.50.30 78 158 4.9E-30 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 32.531 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 9.0E-32 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 SUPERFAMILY SSF54534 83 157 3.92E-23 T 14-10-2018 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 Gene3D G3DSA:1.10.287.180 1 75 9.6E-32 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 1.7E-28 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 PIRSF PIRSF006092 1 158 5.7E-52 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 SUPERFAMILY SSF46557 4 77 1.26E-28 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 C4901_04510 4dbb0605e1253d84763b47ef44635b7b 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 155 3.2E-57 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 C4901_08430 4055036c9441d9d52d547abd9b91b213 460 Gene3D G3DSA:1.20.1250.20 275 454 3.4E-34 T 14-10-2018 C4901_08430 4055036c9441d9d52d547abd9b91b213 460 Pfam PF12832 MFS_1 like family 95 428 2.7E-60 T 14-10-2018 IPR024989 Major facilitator superfamily associated domain C4901_08430 4055036c9441d9d52d547abd9b91b213 460 Gene3D G3DSA:1.20.1250.20 89 266 5.1E-20 T 14-10-2018 C4901_08430 4055036c9441d9d52d547abd9b91b213 460 SUPERFAMILY SSF103473 86 450 1.13E-36 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_06695 cbda5bd7284ded70d2e369501f7472ee 326 Gene3D G3DSA:3.40.50.720 6 303 3.3E-114 T 14-10-2018 C4901_06695 cbda5bd7284ded70d2e369501f7472ee 326 Pfam PF16363 GDP-mannose 4,6 dehydratase 7 312 2.6E-100 T 14-10-2018 IPR016040 NAD(P)-binding domain C4901_06695 cbda5bd7284ded70d2e369501f7472ee 326 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 4 323 45.707 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 C4901_06695 cbda5bd7284ded70d2e369501f7472ee 326 SUPERFAMILY SSF51735 4 319 1.42E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_06695 cbda5bd7284ded70d2e369501f7472ee 326 Gene3D G3DSA:3.90.25.10 187 314 3.3E-114 T 14-10-2018 C4901_07245 9f805b8ef1bd5a2d9fdf550617c0db66 289 SUPERFAMILY SSF52540 7 223 4.72E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07245 9f805b8ef1bd5a2d9fdf550617c0db66 289 Pfam PF00005 ABC transporter 26 171 3.4E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_07245 9f805b8ef1bd5a2d9fdf550617c0db66 289 SMART SM00382 35 222 1.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_07245 9f805b8ef1bd5a2d9fdf550617c0db66 289 Gene3D G3DSA:3.40.50.300 6 278 7.7E-59 T 14-10-2018 C4901_07245 9f805b8ef1bd5a2d9fdf550617c0db66 289 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_00385 44ce108e56aa149b08010a9695345663 171 Gene3D G3DSA:1.10.1740.70 64 123 5.7E-6 T 14-10-2018 C4901_00385 44ce108e56aa149b08010a9695345663 171 SUPERFAMILY SSF140376 67 122 1.44E-11 T 14-10-2018 IPR037205 ChaB superfamily C4901_00385 44ce108e56aa149b08010a9695345663 171 Pfam PF06150 ChaB 69 122 1.8E-12 T 14-10-2018 IPR009317 ChaB C4901_16080 b22bcf738e7d8a23a6b89e4eb9c79267 93 Gene3D G3DSA:3.90.940.10 1 81 4.2E-26 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C4901_16080 b22bcf738e7d8a23a6b89e4eb9c79267 93 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 61 17.557 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_16080 b22bcf738e7d8a23a6b89e4eb9c79267 93 SUPERFAMILY SSF63562 1 66 9.42E-25 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C4901_16080 b22bcf738e7d8a23a6b89e4eb9c79267 93 Pfam PF01192 RNA polymerase Rpb6 8 58 4.0E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C4901_16080 b22bcf738e7d8a23a6b89e4eb9c79267 93 SMART SM01409 8 60 1.4E-16 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 C4901_16080 b22bcf738e7d8a23a6b89e4eb9c79267 93 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 58 2.8E-23 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 C4901_16940 a7eb86b813172500767b99fe7bf2a277 299 Gene3D G3DSA:3.30.110.70 69 149 2.6E-5 T 14-10-2018 C4901_16940 a7eb86b813172500767b99fe7bf2a277 299 SUPERFAMILY SSF117782 69 144 2.35E-7 T 14-10-2018 IPR035439 UPF0145 domain superfamily C4901_16940 a7eb86b813172500767b99fe7bf2a277 299 Pfam PF01906 Putative heavy-metal-binding 89 142 1.1E-4 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 C4901_07470 b90ea3ae7249a1ec67f136583acd866b 110 Pfam PF00893 Small Multidrug Resistance protein 1 93 3.7E-31 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 C4901_07470 b90ea3ae7249a1ec67f136583acd866b 110 SUPERFAMILY SSF103481 5 104 3.14E-20 T 14-10-2018 C4901_07470 b90ea3ae7249a1ec67f136583acd866b 110 Gene3D G3DSA:1.10.3730.20 1 109 6.6E-38 T 14-10-2018 C4901_07815 b92cb1eec436813db79a55420fa06bde 601 SUPERFAMILY SSF75304 6 448 7.98E-111 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C4901_07815 b92cb1eec436813db79a55420fa06bde 601 Gene3D G3DSA:3.10.490.10 471 600 2.0E-48 T 14-10-2018 C4901_07815 b92cb1eec436813db79a55420fa06bde 601 Pfam PF01425 Amidase 42 437 2.7E-86 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C4901_07815 b92cb1eec436813db79a55420fa06bde 601 Gene3D G3DSA:3.90.1300.10 38 441 3.7E-158 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C4901_07815 b92cb1eec436813db79a55420fa06bde 601 Gene3D G3DSA:1.20.58.1700 294 367 3.7E-158 T 14-10-2018 C4901_07815 b92cb1eec436813db79a55420fa06bde 601 TIGRFAM TIGR02713 allophanate_hyd: allophanate hydrolase 39 594 1.1E-233 T 14-10-2018 IPR014085 Allophanate hydrolase KEGG: 00220+3.5.1.54|KEGG: 00791+3.5.1.54|MetaCyc: PWY-5169|MetaCyc: PWY-5703 C4901_05325 0558bcf5bbba234242e0d35a16ac65d9 215 SMART SM00849 14 194 3.8E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase C4901_05325 0558bcf5bbba234242e0d35a16ac65d9 215 SUPERFAMILY SSF56281 24 212 6.81E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_05325 0558bcf5bbba234242e0d35a16ac65d9 215 Gene3D G3DSA:3.60.15.10 3 207 1.3E-41 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_05325 0558bcf5bbba234242e0d35a16ac65d9 215 Pfam PF00753 Metallo-beta-lactamase superfamily 26 194 1.7E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase C4901_01160 c9760119bedbcfbe45a75009aa22e70c 249 SMART SM00563 72 186 2.7E-30 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C4901_01160 c9760119bedbcfbe45a75009aa22e70c 249 SUPERFAMILY SSF69593 13 221 6.02E-36 T 14-10-2018 C4901_01160 c9760119bedbcfbe45a75009aa22e70c 249 Pfam PF01553 Acyltransferase 60 183 1.0E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C4901_05145 2a63578bf0176beb41c1047417903fe8 508 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 1 457 19.528 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 1 492 8.7E-145 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 PIRSF PIRSF002869 1 502 4.9E-161 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 Pfam PF03023 MviN-like protein 16 461 5.0E-140 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 PRINTS PR01806 Virulence factor MviN signature 348 367 4.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 PRINTS PR01806 Virulence factor MviN signature 40 56 4.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 PRINTS PR01806 Virulence factor MviN signature 400 417 4.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 PRINTS PR01806 Virulence factor MviN signature 21 40 4.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 PRINTS PR01806 Virulence factor MviN signature 124 148 4.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 PRINTS PR01806 Virulence factor MviN signature 250 276 4.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_05145 2a63578bf0176beb41c1047417903fe8 508 PRINTS PR01806 Virulence factor MviN signature 148 169 4.5E-76 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ C4901_16685 1895d6ceb4dc26f9ef186bda42a5280b 428 SUPERFAMILY SSF51412 17 317 3.3E-32 T 14-10-2018 C4901_16685 1895d6ceb4dc26f9ef186bda42a5280b 428 Pfam PF03060 Nitronate monooxygenase 167 306 3.4E-23 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 C4901_16685 1895d6ceb4dc26f9ef186bda42a5280b 428 Gene3D G3DSA:3.20.20.70 16 329 1.5E-40 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_03850 2f073ffe83e93275248c58a5f5ad9af3 326 Gene3D G3DSA:3.40.50.970 3 189 9.1E-72 T 14-10-2018 C4901_03850 2f073ffe83e93275248c58a5f5ad9af3 326 Pfam PF02779 Transketolase, pyrimidine binding domain 3 179 7.6E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C4901_03850 2f073ffe83e93275248c58a5f5ad9af3 326 SUPERFAMILY SSF52922 189 324 1.44E-36 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C4901_03850 2f073ffe83e93275248c58a5f5ad9af3 326 SUPERFAMILY SSF52518 4 189 3.64E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_03850 2f073ffe83e93275248c58a5f5ad9af3 326 Pfam PF02780 Transketolase, C-terminal domain 195 315 1.5E-35 T 14-10-2018 IPR033248 Transketolase, C-terminal domain C4901_03850 2f073ffe83e93275248c58a5f5ad9af3 326 SMART SM00861 4 179 1.3E-52 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C4901_03850 2f073ffe83e93275248c58a5f5ad9af3 326 Gene3D G3DSA:3.40.50.920 190 324 3.4E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C4901_15000 cc7c703d12238362fab2ae98852e1871 142 Gene3D G3DSA:3.30.450.30 13 133 9.3E-17 T 14-10-2018 C4901_15000 cc7c703d12238362fab2ae98852e1871 142 SUPERFAMILY SSF103196 5 133 4.01E-13 T 14-10-2018 C4901_15000 cc7c703d12238362fab2ae98852e1871 142 SMART SM00960 15 104 2.1E-4 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain C4901_11665 afec7e9fca90a33e49e0d805339cb7fb 143 Gene3D G3DSA:3.40.50.1010 1 125 2.8E-14 T 14-10-2018 C4901_11665 afec7e9fca90a33e49e0d805339cb7fb 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 137 10.873 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_11665 afec7e9fca90a33e49e0d805339cb7fb 143 SUPERFAMILY SSF88723 1 136 1.99E-16 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_11665 afec7e9fca90a33e49e0d805339cb7fb 143 Pfam PF01850 PIN domain 2 130 3.4E-13 T 14-10-2018 IPR002716 PIN domain C4901_04555 f30dca57b8cbbfa5be43193cf3b5c20b 118 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 1 118 20.205 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 C4901_04555 f30dca57b8cbbfa5be43193cf3b5c20b 118 Gene3D G3DSA:1.20.58.1610 1 118 8.7E-45 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04555 f30dca57b8cbbfa5be43193cf3b5c20b 118 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 21 117 9.8E-39 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_09940 8523d8cf8d68f8bd82ba717e4b27dc2f 326 Pfam PF01636 Phosphotransferase enzyme family 34 264 1.6E-30 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C4901_09940 8523d8cf8d68f8bd82ba717e4b27dc2f 326 Gene3D G3DSA:1.10.510.10 58 257 4.8E-103 T 14-10-2018 C4901_09940 8523d8cf8d68f8bd82ba717e4b27dc2f 326 SUPERFAMILY SSF56112 5 322 1.9E-71 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_09940 8523d8cf8d68f8bd82ba717e4b27dc2f 326 Gene3D G3DSA:1.20.1270.170 146 303 4.8E-103 T 14-10-2018 C4901_09940 8523d8cf8d68f8bd82ba717e4b27dc2f 326 Gene3D G3DSA:3.30.200.70 12 106 4.8E-103 T 14-10-2018 C4901_09940 8523d8cf8d68f8bd82ba717e4b27dc2f 326 Hamap MF_01497 Stress response kinase A [srkA]. 3 317 40.829 T 14-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 C4901_12715 77043882247d5f2919db0d08a51b8531 337 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 176 1.3E-72 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C4901_12715 77043882247d5f2919db0d08a51b8531 337 PIRSF PIRSF000116 3 206 1.1E-45 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C4901_12715 77043882247d5f2919db0d08a51b8531 337 PIRSF PIRSF000116 200 331 9.5E-13 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C4901_12715 77043882247d5f2919db0d08a51b8531 337 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 325 7.1E-132 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C4901_12715 77043882247d5f2919db0d08a51b8531 337 Gene3D G3DSA:3.40.50.720 1 180 3.7E-75 T 14-10-2018 C4901_12715 77043882247d5f2919db0d08a51b8531 337 Gene3D G3DSA:1.10.3730.40 181 337 2.7E-76 T 14-10-2018 C4901_12715 77043882247d5f2919db0d08a51b8531 337 SUPERFAMILY SSF48179 182 331 4.59E-71 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_12715 77043882247d5f2919db0d08a51b8531 337 SUPERFAMILY SSF51735 1 181 2.21E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_12715 77043882247d5f2919db0d08a51b8531 337 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 182 325 1.2E-67 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C4901_12715 77043882247d5f2919db0d08a51b8531 337 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 1 327 45.027 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 C4901_12925 6ab2e0e2799755bf3b01be04a38a0b7c 353 SUPERFAMILY SSF51905 6 329 2.34E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_12925 6ab2e0e2799755bf3b01be04a38a0b7c 353 Gene3D G3DSA:3.50.50.60 1 346 2.4E-66 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_12925 6ab2e0e2799755bf3b01be04a38a0b7c 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 5.3E-11 T 14-10-2018 C4901_12925 6ab2e0e2799755bf3b01be04a38a0b7c 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 137 152 5.3E-11 T 14-10-2018 C4901_12925 6ab2e0e2799755bf3b01be04a38a0b7c 353 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 255 270 5.3E-11 T 14-10-2018 C4901_12925 6ab2e0e2799755bf3b01be04a38a0b7c 353 Pfam PF01494 FAD binding domain 7 161 9.9E-9 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 C4901_12925 6ab2e0e2799755bf3b01be04a38a0b7c 353 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 6 287 2.7E-57 T 14-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 C4901_00300 21286653cce8294506a0a6caf5a9158e 351 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 160 334 2.8E-22 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_00300 21286653cce8294506a0a6caf5a9158e 351 Gene3D G3DSA:3.40.50.2000 190 351 3.6E-33 T 14-10-2018 C4901_00300 21286653cce8294506a0a6caf5a9158e 351 Gene3D G3DSA:3.40.50.2000 33 176 1.1E-26 T 14-10-2018 C4901_00300 21286653cce8294506a0a6caf5a9158e 351 SUPERFAMILY SSF53756 38 350 2.51E-65 T 14-10-2018 C4901_00820 04e93556a6692da8402d76167172595b 347 SUPERFAMILY SSF54106 30 78 7.72E-6 T 14-10-2018 C4901_00820 04e93556a6692da8402d76167172595b 347 Pfam PF01476 LysM domain 32 78 2.3E-11 T 14-10-2018 IPR018392 LysM domain C4901_00820 04e93556a6692da8402d76167172595b 347 SMART SM00257 31 79 0.0043 T 14-10-2018 IPR018392 LysM domain C4901_00820 04e93556a6692da8402d76167172595b 347 Gene3D G3DSA:3.10.350.10 30 77 2.2E-13 T 14-10-2018 IPR036779 LysM domain superfamily C4901_05485 11aaff2781a8d9802596a4bff0410b8f 172 Pfam PF00510 Cytochrome c oxidase subunit III 4 167 3.5E-7 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05485 11aaff2781a8d9802596a4bff0410b8f 172 Gene3D G3DSA:1.20.120.80 1 169 1.2E-30 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05485 11aaff2781a8d9802596a4bff0410b8f 172 SUPERFAMILY SSF81452 4 167 4.19E-29 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10085 2712fe9b49159354447d89df24ae5bee 98 Pfam PF00936 BMC domain 8 83 2.0E-24 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_10085 2712fe9b49159354447d89df24ae5bee 98 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 8 69 8.0E-20 T 14-10-2018 C4901_10085 2712fe9b49159354447d89df24ae5bee 98 SUPERFAMILY SSF143414 8 94 4.84E-27 T 14-10-2018 IPR037233 CcmK-like superfamily C4901_10085 2712fe9b49159354447d89df24ae5bee 98 SMART SM00877 7 84 4.5E-29 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_10085 2712fe9b49159354447d89df24ae5bee 98 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 25 44 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site C4901_10085 2712fe9b49159354447d89df24ae5bee 98 Gene3D G3DSA:3.30.70.1710 1 90 2.0E-35 T 14-10-2018 C4901_13465 6ad78c041f67c2f172b775d5d23e9e4f 195 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 14 178 1.2E-21 T 14-10-2018 IPR025847 MEDS domain C4901_00675 49568ffb2fa7ddd5535ac1b63f80c8d1 204 SUPERFAMILY SSF51391 3 201 1.96E-49 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C4901_00675 49568ffb2fa7ddd5535ac1b63f80c8d1 204 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 6 194 1.1E-46 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C4901_00675 49568ffb2fa7ddd5535ac1b63f80c8d1 204 Gene3D G3DSA:3.20.20.70 2 203 1.6E-51 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_00675 49568ffb2fa7ddd5535ac1b63f80c8d1 204 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 3 201 23.389 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C4901_00675 49568ffb2fa7ddd5535ac1b63f80c8d1 204 Pfam PF02581 Thiamine monophosphate synthase 6 182 1.6E-44 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C4901_07715 e32f998e254a1c972a2346fd5519607c 537 SMART SM00382 26 238 3.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_07715 e32f998e254a1c972a2346fd5519607c 537 SMART SM00382 343 511 2.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_07715 e32f998e254a1c972a2346fd5519607c 537 Pfam PF00005 ABC transporter 18 184 1.5E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_07715 e32f998e254a1c972a2346fd5519607c 537 Pfam PF00005 ABC transporter 336 466 5.4E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_07715 e32f998e254a1c972a2346fd5519607c 537 Gene3D G3DSA:3.40.50.300 5 277 2.6E-56 T 14-10-2018 C4901_07715 e32f998e254a1c972a2346fd5519607c 537 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_07715 e32f998e254a1c972a2346fd5519607c 537 Pfam PF12848 ABC transporter 224 309 1.1E-19 T 14-10-2018 IPR032781 ABC-transporter extension domain C4901_07715 e32f998e254a1c972a2346fd5519607c 537 SUPERFAMILY SSF52540 4 239 8.42E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07715 e32f998e254a1c972a2346fd5519607c 537 Gene3D G3DSA:3.40.50.300 278 534 1.0E-48 T 14-10-2018 C4901_07715 e32f998e254a1c972a2346fd5519607c 537 SUPERFAMILY SSF52540 334 516 3.83E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12405 cd678b968880c95449dacb6045e74bb3 314 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 79 192 3.8E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00820 CbxX/CfqX protein signature 32 46 1.0E-52 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00820 CbxX/CfqX protein signature 50 64 1.0E-52 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00820 CbxX/CfqX protein signature 148 161 1.0E-52 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00820 CbxX/CfqX protein signature 247 258 1.0E-52 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00820 CbxX/CfqX protein signature 262 273 1.0E-52 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00820 CbxX/CfqX protein signature 287 301 1.0E-52 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00820 CbxX/CfqX protein signature 91 106 1.0E-52 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00819 CbxX/CfqX superfamily signature 37 51 1.6E-74 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00819 CbxX/CfqX superfamily signature 129 148 1.6E-74 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00819 CbxX/CfqX superfamily signature 198 217 1.6E-74 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00819 CbxX/CfqX superfamily signature 160 172 1.6E-74 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00819 CbxX/CfqX superfamily signature 255 267 1.6E-74 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00819 CbxX/CfqX superfamily signature 181 198 1.6E-74 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00819 CbxX/CfqX superfamily signature 77 92 1.6E-74 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 PRINTS PR00819 CbxX/CfqX superfamily signature 115 129 1.6E-74 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 Gene3D G3DSA:3.40.50.300 14 210 3.7E-54 T 14-10-2018 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 TIGRFAM TIGR02880 cbbX_cfxQ: CbbX protein 19 301 6.5E-158 T 14-10-2018 IPR000470 CbxX/CfqX, monofunctional GO:0005524 C4901_12405 cd678b968880c95449dacb6045e74bb3 314 SUPERFAMILY SSF52540 30 288 5.46E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12405 cd678b968880c95449dacb6045e74bb3 314 Gene3D G3DSA:1.10.8.60 211 303 3.1E-27 T 14-10-2018 C4901_02870 87572e84d6701d220e1fd162e067c2ff 477 Gene3D G3DSA:2.40.50.140 31 114 2.6E-24 T 14-10-2018 C4901_02870 87572e84d6701d220e1fd162e067c2ff 477 SUPERFAMILY SSF50249 39 113 1.16E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_02870 87572e84d6701d220e1fd162e067c2ff 477 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 414 1.4E-153 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 C4901_02870 87572e84d6701d220e1fd162e067c2ff 477 Pfam PF10150 Ribonuclease E/G family 111 381 4.6E-104 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 C4901_03990 4d917f5d3eb452c7215b668eee2380e1 402 SUPERFAMILY SSF51735 153 358 4.18E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_03990 4d917f5d3eb452c7215b668eee2380e1 402 Gene3D G3DSA:3.40.50.720 168 347 1.8E-127 T 14-10-2018 C4901_03990 4d917f5d3eb452c7215b668eee2380e1 402 SUPERFAMILY SSF50129 1 187 1.54E-57 T 14-10-2018 IPR011032 GroES-like superfamily C4901_03990 4d917f5d3eb452c7215b668eee2380e1 402 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 136 5.0E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C4901_03990 4d917f5d3eb452c7215b668eee2380e1 402 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C4901_03990 4d917f5d3eb452c7215b668eee2380e1 402 Gene3D G3DSA:3.90.180.10 9 383 1.8E-127 T 14-10-2018 C4901_03990 4d917f5d3eb452c7215b668eee2380e1 402 Pfam PF00107 Zinc-binding dehydrogenase 187 272 1.2E-9 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C4901_14485 d8ac31a3170c8e8ba4cb37d1bbab2a67 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 8 181 3.4E-37 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 C4901_14485 d8ac31a3170c8e8ba4cb37d1bbab2a67 307 Gene3D G3DSA:3.40.50.300 1 192 8.6E-53 T 14-10-2018 C4901_14485 d8ac31a3170c8e8ba4cb37d1bbab2a67 307 PRINTS PR00478 Phosphoribulokinase family signature 139 156 6.9E-14 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C4901_14485 d8ac31a3170c8e8ba4cb37d1bbab2a67 307 PRINTS PR00478 Phosphoribulokinase family signature 12 29 6.9E-14 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C4901_14485 d8ac31a3170c8e8ba4cb37d1bbab2a67 307 PRINTS PR00478 Phosphoribulokinase family signature 157 180 6.9E-14 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C4901_14485 d8ac31a3170c8e8ba4cb37d1bbab2a67 307 PRINTS PR00478 Phosphoribulokinase family signature 104 122 6.9E-14 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C4901_14485 d8ac31a3170c8e8ba4cb37d1bbab2a67 307 ProSitePatterns PS00567 Phosphoribulokinase signature. 139 152 - T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 C4901_14485 d8ac31a3170c8e8ba4cb37d1bbab2a67 307 SUPERFAMILY SSF52540 3 185 2.57E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07695 3d584493be79e96c2cfe42154391b289 236 Gene3D G3DSA:2.60.120.10 11 135 8.7E-81 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_07695 3d584493be79e96c2cfe42154391b289 236 PIRSF PIRSF006232 1 232 6.6E-49 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 C4901_07695 3d584493be79e96c2cfe42154391b289 236 SUPERFAMILY SSF51182 2 231 2.97E-67 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_07695 3d584493be79e96c2cfe42154391b289 236 Gene3D G3DSA:2.60.120.10 7 231 8.7E-81 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_07695 3d584493be79e96c2cfe42154391b289 236 Pfam PF02678 Pirin 11 119 2.0E-35 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 C4901_13915 ed16ee61f8bf18381a700ef556ff31f7 46 Pfam PF11295 Protein of unknown function (DUF3096) 9 43 3.1E-18 T 14-10-2018 IPR021446 Protein of unknown function DUF3096 C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SUPERFAMILY SSF141868 563 812 1.83E-86 T 14-10-2018 IPR035919 EAL domain superfamily C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 385 542 1.9E-30 T 14-10-2018 IPR000160 GGDEF domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SMART SM00091 264 336 1.8 T 14-10-2018 IPR000014 PAS domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SMART SM00091 138 204 1.2E-9 T 14-10-2018 IPR000014 PAS domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Gene3D G3DSA:3.30.450.20 253 375 6.5E-15 T 14-10-2018 C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SUPERFAMILY SSF55785 145 251 3.84E-25 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SMART SM00267 377 548 2.7E-48 T 14-10-2018 IPR000160 GGDEF domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SUPERFAMILY SSF55073 393 546 2.35E-36 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Pfam PF00989 PAS fold 139 249 2.7E-16 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SUPERFAMILY SSF52172 3 141 1.08E-21 T 14-10-2018 IPR011006 CheY-like superfamily C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Gene3D G3DSA:3.40.50.2300 3 137 7.0E-20 T 14-10-2018 C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Gene3D G3DSA:3.20.20.450 559 811 1.0E-97 T 14-10-2018 IPR035919 EAL domain superfamily C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Pfam PF00072 Response regulator receiver domain 7 117 7.5E-14 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Pfam PF13188 PAS domain 266 300 6.6E-6 T 14-10-2018 IPR000014 PAS domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Gene3D G3DSA:3.30.450.20 138 252 1.5E-29 T 14-10-2018 C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SMART SM00052 558 804 3.5E-111 T 14-10-2018 IPR001633 EAL domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SMART SM00448 5 117 1.8E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 137 259 9.3E-20 T 14-10-2018 IPR000014 PAS domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 261 384 2.5E-6 T 14-10-2018 IPR000014 PAS domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Gene3D G3DSA:3.30.70.270 382 552 4.1E-45 T 14-10-2018 C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 SUPERFAMILY SSF55785 249 375 4.19E-13 T 14-10-2018 IPR035965 PAS domain superfamily C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Pfam PF00990 Diguanylate cyclase, GGDEF domain 388 542 1.1E-36 T 14-10-2018 IPR000160 GGDEF domain C4901_13470 16e996bd6fc14aeeb5e115f4da33f27f 824 Pfam PF00563 EAL domain 565 799 1.8E-68 T 14-10-2018 IPR001633 EAL domain C4901_14120 7d0bbf6aeeb6c69c5277c572a95c6e88 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 7 207 30.559 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14120 7d0bbf6aeeb6c69c5277c572a95c6e88 207 Gene3D G3DSA:3.40.1370.10 5 207 3.6E-61 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14120 7d0bbf6aeeb6c69c5277c572a95c6e88 207 Pfam PF00573 Ribosomal protein L4/L1 family 16 204 5.6E-57 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 C4901_14120 7d0bbf6aeeb6c69c5277c572a95c6e88 207 SUPERFAMILY SSF52166 11 206 6.28E-61 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14120 7d0bbf6aeeb6c69c5277c572a95c6e88 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 15 204 3.1E-62 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_10090 bbedd264f3a58b09f410eb1ddb852489 105 SMART SM00877 7 91 2.4E-23 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_10090 bbedd264f3a58b09f410eb1ddb852489 105 SUPERFAMILY SSF143414 8 101 1.18E-23 T 14-10-2018 IPR037233 CcmK-like superfamily C4901_10090 bbedd264f3a58b09f410eb1ddb852489 105 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 8 54 4.0E-19 T 14-10-2018 C4901_10090 bbedd264f3a58b09f410eb1ddb852489 105 Gene3D G3DSA:3.30.70.1710 1 97 1.4E-30 T 14-10-2018 C4901_10090 bbedd264f3a58b09f410eb1ddb852489 105 Pfam PF00936 BMC domain 8 90 4.6E-22 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_10090 bbedd264f3a58b09f410eb1ddb852489 105 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 25 44 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site C4901_10250 938cbca45229793dcde6fd1244e75c13 485 Pfam PF01566 Natural resistance-associated macrophage protein 94 450 3.0E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 C4901_16135 e6ff0d6582682a0a14f427f976fd9042 419 Pfam PF11871 Domain of unknown function (DUF3391) 3 137 3.7E-22 T 14-10-2018 IPR021812 Protein of unknown function DUF3391 C4901_16135 e6ff0d6582682a0a14f427f976fd9042 419 Gene3D G3DSA:1.10.3210.10 91 330 1.7E-62 T 14-10-2018 C4901_16135 e6ff0d6582682a0a14f427f976fd9042 419 SMART SM00471 168 304 3.8E-8 T 14-10-2018 IPR003607 HD/PDEase domain C4901_16135 e6ff0d6582682a0a14f427f976fd9042 419 TIGRFAM TIGR00277 HDIG: HDIG domain 172 262 1.8E-8 T 14-10-2018 IPR006675 HDIG domain C4901_16135 e6ff0d6582682a0a14f427f976fd9042 419 SUPERFAMILY SSF109604 161 334 5.8E-33 T 14-10-2018 C4901_16135 e6ff0d6582682a0a14f427f976fd9042 419 Pfam PF01966 HD domain 175 294 1.0E-11 T 14-10-2018 IPR006674 HD domain C4901_01415 2cb73923bac341721b23f29db442e7d4 283 Gene3D G3DSA:3.20.10.10 119 278 6.6E-53 T 14-10-2018 C4901_01415 2cb73923bac341721b23f29db442e7d4 283 SUPERFAMILY SSF56752 1 272 2.49E-71 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 C4901_01415 2cb73923bac341721b23f29db442e7d4 283 Gene3D G3DSA:3.30.470.10 1 116 4.3E-30 T 14-10-2018 C4901_01415 2cb73923bac341721b23f29db442e7d4 283 Pfam PF01063 Amino-transferase class IV 30 249 1.2E-38 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 C4901_01415 2cb73923bac341721b23f29db442e7d4 283 ProSitePatterns PS00770 Aminotransferases class-IV signature. 175 204 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 C4901_05180 2bbc016eeead5158cd0f9b15b6dae21d 370 Pfam PF01266 FAD dependent oxidoreductase 6 341 6.4E-65 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C4901_05180 2bbc016eeead5158cd0f9b15b6dae21d 370 SUPERFAMILY SSF51905 6 358 1.68E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05180 2bbc016eeead5158cd0f9b15b6dae21d 370 Gene3D G3DSA:3.50.50.60 7 342 1.8E-86 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_05180 2bbc016eeead5158cd0f9b15b6dae21d 370 SUPERFAMILY SSF54373 215 302 2.62E-19 T 14-10-2018 C4901_05180 2bbc016eeead5158cd0f9b15b6dae21d 370 Gene3D G3DSA:3.30.9.10 91 301 1.8E-86 T 14-10-2018 C4901_05180 2bbc016eeead5158cd0f9b15b6dae21d 370 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 7 345 4.2E-81 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 C4901_13355 b6e132650d101fb9356e50370924ac2a 143 SUPERFAMILY SSF51182 45 138 1.78E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_13355 b6e132650d101fb9356e50370924ac2a 143 Gene3D G3DSA:2.60.120.10 33 143 3.4E-28 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_13355 b6e132650d101fb9356e50370924ac2a 143 Pfam PF12973 ChrR Cupin-like domain 63 129 1.4E-21 T 14-10-2018 IPR025979 ChrR-like cupin domain C4901_05625 d80f08908cecb065b520e0797bdf69a0 380 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 45 377 3.5E-135 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 C4901_05625 d80f08908cecb065b520e0797bdf69a0 380 SUPERFAMILY SSF51735 45 379 5.24E-95 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_05625 d80f08908cecb065b520e0797bdf69a0 380 Pfam PF16363 GDP-mannose 4,6 dehydratase 47 366 7.5E-53 T 14-10-2018 IPR016040 NAD(P)-binding domain C4901_05625 d80f08908cecb065b520e0797bdf69a0 380 Gene3D G3DSA:3.40.50.720 46 316 6.3E-139 T 14-10-2018 C4901_05625 d80f08908cecb065b520e0797bdf69a0 380 Gene3D G3DSA:3.90.25.10 236 371 6.3E-139 T 14-10-2018 C4901_05625 d80f08908cecb065b520e0797bdf69a0 380 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 44 194 0.0083 T 14-10-2018 C4901_03780 8644858eed07c8c60676c92c3ec1f3c1 231 Pfam PF13545 Crp-like helix-turn-helix domain 151 220 3.4E-14 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C4901_03780 8644858eed07c8c60676c92c3ec1f3c1 231 SMART SM00100 13 131 5.8E-28 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C4901_03780 8644858eed07c8c60676c92c3ec1f3c1 231 SUPERFAMILY SSF46785 149 222 8.77E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_03780 8644858eed07c8c60676c92c3ec1f3c1 231 SMART SM00419 166 214 2.1E-4 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C4901_03780 8644858eed07c8c60676c92c3ec1f3c1 231 Gene3D G3DSA:1.10.10.10 146 221 7.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_03780 8644858eed07c8c60676c92c3ec1f3c1 231 SUPERFAMILY SSF51206 8 145 1.96E-35 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C4901_03780 8644858eed07c8c60676c92c3ec1f3c1 231 Pfam PF00027 Cyclic nucleotide-binding domain 31 118 3.6E-20 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C4901_03780 8644858eed07c8c60676c92c3ec1f3c1 231 Gene3D G3DSA:2.60.120.10 3 145 2.6E-44 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_02025 e3ca6307a63a1efc3edffd6621a0ce3b 1019 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 235 404 1.3E-25 T 14-10-2018 IPR013407 CRISPR-associated protein Cmr2 C4901_02025 e3ca6307a63a1efc3edffd6621a0ce3b 1019 TIGRFAM TIGR02577 cas_TM1794_Cmr2: CRISPR-associated protein Cas10/Cmr2, subtype III-B 482 872 9.8E-43 T 14-10-2018 IPR013407 CRISPR-associated protein Cmr2 C4901_02025 e3ca6307a63a1efc3edffd6621a0ce3b 1019 Gene3D G3DSA:3.30.70.2220 201 417 1.2E-51 T 14-10-2018 IPR038242 Cmr2, N-terminal domain superfamily C4901_02025 e3ca6307a63a1efc3edffd6621a0ce3b 1019 Pfam PF12469 CRISPR-associated protein 235 359 7.7E-32 T 14-10-2018 IPR024615 CRISPR-associated protein Cmr2, N-terminal C4901_12215 d859a272776de4aab6e12ab042b8929c 293 Gene3D G3DSA:3.40.50.300 79 287 3.2E-63 T 14-10-2018 C4901_12215 d859a272776de4aab6e12ab042b8929c 293 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 71 280 2.8E-83 T 14-10-2018 IPR004392 Hydrogenase maturation factor HypB GO:0016151|GO:0051604 C4901_12215 d859a272776de4aab6e12ab042b8929c 293 SUPERFAMILY SSF52540 69 279 3.14E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12215 d859a272776de4aab6e12ab042b8929c 293 PIRSF PIRSF005624 64 291 6.1E-91 T 14-10-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 C4901_12215 d859a272776de4aab6e12ab042b8929c 293 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 99 260 5.0E-32 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain C4901_16510 34c495c1f72bfc56779ba82b981584d0 363 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 44 357 1.5E-71 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C4901_16510 34c495c1f72bfc56779ba82b981584d0 363 Gene3D G3DSA:1.10.287.470 103 162 1.5E-66 T 14-10-2018 C4901_16510 34c495c1f72bfc56779ba82b981584d0 363 SUPERFAMILY SSF111369 60 273 1.7E-38 T 14-10-2018 C4901_16510 34c495c1f72bfc56779ba82b981584d0 363 Gene3D G3DSA:2.40.420.20 280 355 1.5E-66 T 14-10-2018 C4901_16510 34c495c1f72bfc56779ba82b981584d0 363 Gene3D G3DSA:2.40.50.100 68 196 1.5E-66 T 14-10-2018 C4901_16510 34c495c1f72bfc56779ba82b981584d0 363 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 70 268 1.1E-27 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C4901_16510 34c495c1f72bfc56779ba82b981584d0 363 Gene3D G3DSA:2.40.30.170 58 279 1.5E-66 T 14-10-2018 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 142 165 1.3E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 93 109 1.3E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 216 240 1.3E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 185 206 1.3E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 46 66 1.3E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 PRINTS PR00377 Inositol monophosphatase superfamily signature 68 84 1.3E-30 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 SUPERFAMILY SSF56655 24 270 1.57E-65 T 14-10-2018 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 Pfam PF00459 Inositol monophosphatase family 13 246 8.8E-50 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 219 233 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 93 106 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 Gene3D G3DSA:3.30.540.10 11 155 3.2E-38 T 14-10-2018 C4901_14490 d81d009e1ed8341a96db5516ad6a2fda 276 Gene3D G3DSA:3.40.190.80 170 272 6.4E-22 T 14-10-2018 C4901_09505 9939451f87f67a9e9b26c4c1b71c0cce 209 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 95 173 6.2E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_09505 9939451f87f67a9e9b26c4c1b71c0cce 209 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 179 1.6E-32 T 14-10-2018 C4901_09505 9939451f87f67a9e9b26c4c1b71c0cce 209 Gene3D G3DSA:1.10.150.240 13 79 1.9E-52 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C4901_09505 9939451f87f67a9e9b26c4c1b71c0cce 209 SUPERFAMILY SSF56784 1 208 5.74E-55 T 14-10-2018 IPR036412 HAD-like superfamily C4901_09505 9939451f87f67a9e9b26c4c1b71c0cce 209 Gene3D G3DSA:3.40.50.1000 2 201 1.9E-52 T 14-10-2018 IPR023214 HAD superfamily C4901_09505 9939451f87f67a9e9b26c4c1b71c0cce 209 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 179 1.4E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_04425 953c95ab0d0aaf3073aa5160a2a3a9b2 156 SUPERFAMILY SSF74982 6 136 3.01E-51 T 14-10-2018 IPR023620 Small protein B C4901_04425 953c95ab0d0aaf3073aa5160a2a3a9b2 156 TIGRFAM TIGR00086 smpB: SsrA-binding protein 11 154 2.7E-55 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C4901_04425 953c95ab0d0aaf3073aa5160a2a3a9b2 156 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 12 136 3.0E-51 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C4901_04425 953c95ab0d0aaf3073aa5160a2a3a9b2 156 Gene3D G3DSA:2.40.280.10 5 133 1.3E-47 T 14-10-2018 IPR023620 Small protein B C4901_04425 953c95ab0d0aaf3073aa5160a2a3a9b2 156 Pfam PF01668 SmpB protein 12 155 5.7E-59 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C4901_04425 953c95ab0d0aaf3073aa5160a2a3a9b2 156 Hamap MF_00023 SsrA-binding protein [smpB]. 1 156 71.499 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 C4901_04270 56973df7c7ebe4b2b2a911654eedea16 304 ProSitePatterns PS01125 ROK family signature. 131 158 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 C4901_04270 56973df7c7ebe4b2b2a911654eedea16 304 Pfam PF00480 ROK family 3 291 1.4E-73 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 C4901_04270 56973df7c7ebe4b2b2a911654eedea16 304 SUPERFAMILY SSF53067 3 291 1.97E-59 T 14-10-2018 C4901_04270 56973df7c7ebe4b2b2a911654eedea16 304 Gene3D G3DSA:3.30.420.40 4 288 3.3E-81 T 14-10-2018 C4901_04270 56973df7c7ebe4b2b2a911654eedea16 304 Gene3D G3DSA:3.30.420.40 120 281 3.3E-81 T 14-10-2018 C4901_16650 78e9be1cf9ad231447d03d7eb9a38390 105 SMART SM00530 51 104 0.0014 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_16650 78e9be1cf9ad231447d03d7eb9a38390 105 Gene3D G3DSA:1.10.260.40 2 104 1.7E-16 T 14-10-2018 C4901_16650 78e9be1cf9ad231447d03d7eb9a38390 105 Pfam PF01381 Helix-turn-helix 52 89 2.0E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_16650 78e9be1cf9ad231447d03d7eb9a38390 105 SUPERFAMILY SSF47413 50 98 1.97E-10 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_00370 ea0a8554863e634dbfc436fec846e20b 249 TIGRFAM TIGR04255 sporadTIGR04255: TIGR04255 family protein 8 246 4.1E-40 T 14-10-2018 IPR026349 Conserved hypothetical protein CHP04255 C4901_11210 17bec4d1cfa099310159e2da7b3a96f9 463 SUPERFAMILY SSF56349 151 428 2.33E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_11210 17bec4d1cfa099310159e2da7b3a96f9 463 Gene3D G3DSA:1.10.150.130 149 248 3.7E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_11210 17bec4d1cfa099310159e2da7b3a96f9 463 Pfam PF00589 Phage integrase family 253 422 4.2E-32 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_11210 17bec4d1cfa099310159e2da7b3a96f9 463 Gene3D G3DSA:1.10.443.10 252 432 5.1E-34 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 Gene3D G3DSA:3.40.1020.10 327 501 2.1E-67 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 42 55 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 Gene3D G3DSA:3.40.50.1100 50 146 6.1E-138 T 14-10-2018 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 SUPERFAMILY SSF55021 408 500 1.68E-26 T 14-10-2018 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 SUPERFAMILY SSF53686 3 353 1.57E-105 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 318 407 5.8E-24 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 417 500 3.8E-22 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 4 500 1.3E-238 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 18 305 6.2E-84 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 SUPERFAMILY SSF55021 326 411 4.12E-27 T 14-10-2018 C4901_01690 3ec2634899349574ebfb7855ab971fe7 501 Gene3D G3DSA:3.40.50.1100 14 316 6.1E-138 T 14-10-2018 C4901_03455 163272ca848f31ae8e587f95d0efac91 405 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 13 405 5.2E-131 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C4901_03455 163272ca848f31ae8e587f95d0efac91 405 Gene3D G3DSA:3.60.70.12 11 275 4.8E-94 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C4901_03455 163272ca848f31ae8e587f95d0efac91 405 SUPERFAMILY SSF56266 14 401 2.88E-137 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C4901_03455 163272ca848f31ae8e587f95d0efac91 405 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 405 148.417 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C4901_03455 163272ca848f31ae8e587f95d0efac91 405 Gene3D G3DSA:3.10.20.340 276 405 1.9E-43 T 14-10-2018 C4901_03455 163272ca848f31ae8e587f95d0efac91 405 Pfam PF01960 ArgJ family 20 405 1.6E-144 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 C4901_03455 163272ca848f31ae8e587f95d0efac91 405 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 21 403 1.0E-100 T 14-10-2018 C4901_14940 194db510d757a5f1a9dabae56f139bfb 343 PIRSF PIRSF004930 8 329 1.6E-101 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 C4901_14940 194db510d757a5f1a9dabae56f139bfb 343 SUPERFAMILY SSF55821 15 211 3.05E-64 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C4901_14940 194db510d757a5f1a9dabae56f139bfb 343 Gene3D G3DSA:3.40.50.11030 256 328 5.0E-6 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily C4901_14940 194db510d757a5f1a9dabae56f139bfb 343 Pfam PF03481 Putative GTP-binding controlling metal-binding 218 323 9.1E-17 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain C4901_14940 194db510d757a5f1a9dabae56f139bfb 343 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 15 206 1.1E-56 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C4901_14940 194db510d757a5f1a9dabae56f139bfb 343 Pfam PF01300 Telomere recombination 24 199 1.1E-55 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 C4901_14940 194db510d757a5f1a9dabae56f139bfb 343 Gene3D G3DSA:3.90.870.10 10 214 1.8E-80 T 14-10-2018 C4901_08310 4b3061ac76d6cffdc9af6a87ca87f219 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 6.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 C4901_08310 4b3061ac76d6cffdc9af6a87ca87f219 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 6.8E-37 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 C4901_08310 4b3061ac76d6cffdc9af6a87ca87f219 72 SUPERFAMILY SSF50249 2 70 1.94E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_08310 4b3061ac76d6cffdc9af6a87ca87f219 72 Gene3D G3DSA:2.40.50.140 2 70 1.4E-34 T 14-10-2018 C4901_08310 4b3061ac76d6cffdc9af6a87ca87f219 72 SMART SM00316 4 72 2.5E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 C4901_08310 4b3061ac76d6cffdc9af6a87ca87f219 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 26.119 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 C4901_09550 bb761ccd5764b6d6be7d4a82fcdcc4c8 321 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 23 309 1.6E-63 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C4901_09550 bb761ccd5764b6d6be7d4a82fcdcc4c8 321 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 15 316 3.4E-97 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C4901_09550 bb761ccd5764b6d6be7d4a82fcdcc4c8 321 SUPERFAMILY SSF52540 49 178 6.02E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_09550 bb761ccd5764b6d6be7d4a82fcdcc4c8 321 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 10 318 37.155 T 14-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 C4901_04165 a3d68ebbd2f256dfdedb02dd37fe63a4 120 Gene3D G3DSA:1.10.10.10 5 110 2.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_04165 a3d68ebbd2f256dfdedb02dd37fe63a4 120 Pfam PF12840 Helix-turn-helix domain 12 70 2.2E-12 T 14-10-2018 C4901_04165 a3d68ebbd2f256dfdedb02dd37fe63a4 120 SMART SM00418 13 91 1.5E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_04165 a3d68ebbd2f256dfdedb02dd37fe63a4 120 SUPERFAMILY SSF46785 11 103 1.21E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_04165 a3d68ebbd2f256dfdedb02dd37fe63a4 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 1.7E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_04165 a3d68ebbd2f256dfdedb02dd37fe63a4 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 1.7E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_04165 a3d68ebbd2f256dfdedb02dd37fe63a4 120 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 1.7E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_07150 598571c724ccd35f7c7df833555950c2 86 SUPERFAMILY SSF111148 1 77 1.09E-26 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 C4901_07150 598571c724ccd35f7c7df833555950c2 86 Pfam PF04362 Bacterial Fe(2+) trafficking 1 75 1.4E-26 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C4901_07150 598571c724ccd35f7c7df833555950c2 86 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 72 6.0E-17 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C4901_07150 598571c724ccd35f7c7df833555950c2 86 Gene3D G3DSA:1.10.3880.10 1 72 8.1E-28 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 C4901_00810 14ce7104189d34d7dd9a472274a6776f 307 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 298 1.5E-78 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 C4901_00810 14ce7104189d34d7dd9a472274a6776f 307 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 301 33.386 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 C4901_00810 14ce7104189d34d7dd9a472274a6776f 307 Gene3D G3DSA:3.40.50.12230 1 306 6.3E-99 T 14-10-2018 C4901_00810 14ce7104189d34d7dd9a472274a6776f 307 SUPERFAMILY SSF50486 203 303 4.71E-23 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 C4901_00810 14ce7104189d34d7dd9a472274a6776f 307 Pfam PF00551 Formyl transferase 7 177 8.6E-40 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_00810 14ce7104189d34d7dd9a472274a6776f 307 Pfam PF02911 Formyl transferase, C-terminal domain 202 297 3.0E-20 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_00810 14ce7104189d34d7dd9a472274a6776f 307 SUPERFAMILY SSF53328 2 204 1.83E-59 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_08205 52943fb18189408b734305a4cdf08a75 238 SMART SM00363 6 64 5.6E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_08205 52943fb18189408b734305a4cdf08a75 238 SUPERFAMILY SSF55174 6 91 2.75E-8 T 14-10-2018 C4901_08205 52943fb18189408b734305a4cdf08a75 238 Pfam PF01479 S4 domain 6 39 2.7E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_08205 52943fb18189408b734305a4cdf08a75 238 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 108 233 7.5E-33 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 C4901_08205 52943fb18189408b734305a4cdf08a75 238 Pfam PF00849 RNA pseudouridylate synthase 67 155 6.9E-7 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_08205 52943fb18189408b734305a4cdf08a75 238 Gene3D G3DSA:3.10.290.10 1 56 1.4E-12 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C4901_08205 52943fb18189408b734305a4cdf08a75 238 Gene3D G3DSA:3.30.2350.10 61 237 1.6E-38 T 14-10-2018 C4901_08205 52943fb18189408b734305a4cdf08a75 238 SUPERFAMILY SSF55120 66 236 7.68E-34 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_16040 f0560539826aba10054614e8ff4e55e7 889 Gene3D G3DSA:3.40.50.300 290 511 5.2E-12 T 14-10-2018 C4901_16040 f0560539826aba10054614e8ff4e55e7 889 Gene3D G3DSA:3.20.20.140 13 205 7.2E-15 T 14-10-2018 C4901_16040 f0560539826aba10054614e8ff4e55e7 889 SUPERFAMILY SSF52540 289 856 8.52E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16040 f0560539826aba10054614e8ff4e55e7 889 SUPERFAMILY SSF89550 22 268 1.12E-12 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 C4901_14765 8c7d83fcf61ec38b925eab6e8d657441 369 PIRSF PIRSF000390 1 360 1.2E-61 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C4901_14765 8c7d83fcf61ec38b925eab6e8d657441 369 Gene3D G3DSA:3.90.1150.10 232 358 1.3E-17 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_14765 8c7d83fcf61ec38b925eab6e8d657441 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 17 354 4.4E-67 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase C4901_14765 8c7d83fcf61ec38b925eab6e8d657441 369 SUPERFAMILY SSF53383 23 357 1.83E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_14765 8c7d83fcf61ec38b925eab6e8d657441 369 Gene3D G3DSA:3.40.640.10 3 231 2.6E-55 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_12680 dfa5f5586a032359cd01cc404584dd99 145 Gene3D G3DSA:3.40.50.1010 2 140 1.4E-8 T 14-10-2018 C4901_12680 dfa5f5586a032359cd01cc404584dd99 145 SUPERFAMILY SSF88723 2 127 5.61E-11 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_12680 dfa5f5586a032359cd01cc404584dd99 145 Pfam PF01850 PIN domain 3 117 1.6E-7 T 14-10-2018 IPR002716 PIN domain C4901_01875 6b46f4a27c6642509d0aff51b9dec00f 331 SUPERFAMILY SSF55729 14 234 3.12E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_01875 6b46f4a27c6642509d0aff51b9dec00f 331 Gene3D G3DSA:3.40.630.30 171 307 6.4E-8 T 14-10-2018 C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 SMART SM00965 72 120 1.6E-5 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 PRINTS PR00811 Bacterial general secretion pathway protein D signature 452 470 1.3E-18 T 14-10-2018 IPR001775 GspD/PilQ family C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 PRINTS PR00811 Bacterial general secretion pathway protein D signature 475 489 1.3E-18 T 14-10-2018 IPR001775 GspD/PilQ family C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 PRINTS PR00811 Bacterial general secretion pathway protein D signature 233 243 1.3E-18 T 14-10-2018 IPR001775 GspD/PilQ family C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 PRINTS PR00811 Bacterial general secretion pathway protein D signature 335 359 1.3E-18 T 14-10-2018 IPR001775 GspD/PilQ family C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 Gene3D G3DSA:3.55.50.30 29 144 6.9E-36 T 14-10-2018 C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 Pfam PF03958 Bacterial type II/III secretion system short domain 146 233 5.3E-19 T 14-10-2018 IPR005644 NolW-like C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 Pfam PF00263 Bacterial type II and III secretion system protein 339 487 6.6E-41 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 48 487 8.8E-137 T 14-10-2018 IPR013355 Type IV pilus secretin PilQ C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 433 466 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 C4901_16295 9b5eadbed145859dbbf57570bc972a68 496 Gene3D G3DSA:3.30.1370.120 145 232 9.8E-16 T 14-10-2018 IPR038591 NolW-like superfamily C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 Pfam PF14698 Argininosuccinate lyase C-terminal 369 434 5.0E-24 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00149 Fumarate lyase superfamily signature 106 124 4.2E-32 T 14-10-2018 IPR000362 Fumarate lyase family C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00149 Fumarate lyase superfamily signature 279 295 4.2E-32 T 14-10-2018 IPR000362 Fumarate lyase family C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00149 Fumarate lyase superfamily signature 235 262 4.2E-32 T 14-10-2018 IPR000362 Fumarate lyase family C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00149 Fumarate lyase superfamily signature 151 169 4.2E-32 T 14-10-2018 IPR000362 Fumarate lyase family C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 Hamap MF_00006 Argininosuccinate lyase [argH]. 6 457 43.214 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 Gene3D G3DSA:1.20.200.10 111 450 6.6E-148 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00145 Argininosuccinate lyase family signature 197 213 5.7E-67 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00145 Argininosuccinate lyase family signature 105 127 5.7E-67 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00145 Argininosuccinate lyase family signature 146 166 5.7E-67 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00145 Argininosuccinate lyase family signature 314 333 5.7E-67 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00145 Argininosuccinate lyase family signature 235 259 5.7E-67 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 PRINTS PR00145 Argininosuccinate lyase family signature 279 295 5.7E-67 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 Gene3D G3DSA:1.10.40.30 368 438 6.6E-148 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 TIGRFAM TIGR00838 argH: argininosuccinate lyase 8 459 9.5E-184 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 SUPERFAMILY SSF48557 8 459 2.04E-150 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 Gene3D G3DSA:1.10.275.50 4 110 1.2E-38 T 14-10-2018 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 ProSitePatterns PS00163 Fumarate lyases signature. 279 288 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C4901_02220 96b99bcf2c6dc3cb39cd5639c3906fde 468 Pfam PF00206 Lyase 10 304 1.4E-77 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 Gene3D G3DSA:3.50.50.100 4 383 4.4E-67 T 14-10-2018 C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.2E-10 T 14-10-2018 C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 1.2E-10 T 14-10-2018 C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.2E-10 T 14-10-2018 C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.0E-6 T 14-10-2018 C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 8.0E-6 T 14-10-2018 C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 8.0E-6 T 14-10-2018 C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 SUPERFAMILY SSF51905 1 336 1.12E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_15245 3e82cd323062504329d5deeeb436c5f9 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 319 8.1E-33 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_09250 afea9ca208da8c8de9c474e2c16c0dad 556 Gene3D G3DSA:3.40.50.300 52 164 7.5E-8 T 14-10-2018 C4901_09250 afea9ca208da8c8de9c474e2c16c0dad 556 SUPERFAMILY SSF52980 405 510 2.79E-10 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C4901_09250 afea9ca208da8c8de9c474e2c16c0dad 556 Pfam PF13087 AAA domain 198 370 7.4E-12 T 14-10-2018 C4901_09250 afea9ca208da8c8de9c474e2c16c0dad 556 SUPERFAMILY SSF52540 94 370 7.73E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_09250 afea9ca208da8c8de9c474e2c16c0dad 556 Gene3D G3DSA:3.40.960.10 409 510 1.0E-16 T 14-10-2018 C4901_09250 afea9ca208da8c8de9c474e2c16c0dad 556 Gene3D G3DSA:3.40.50.300 209 404 8.2E-24 T 14-10-2018 C4901_04600 d5f5613a0142b1f683412bec8b496584 203 Gene3D G3DSA:1.20.120.1200 5 169 9.9E-41 T 14-10-2018 C4901_04600 d5f5613a0142b1f683412bec8b496584 203 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 18 167 4.9E-35 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02465 5c8ef83454569fed9abd0dab40b62d8f 122 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 7 41 2.2E-10 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_02465 5c8ef83454569fed9abd0dab40b62d8f 122 Gene3D G3DSA:3.40.1620.10 2 45 3.9E-8 T 14-10-2018 C4901_02465 5c8ef83454569fed9abd0dab40b62d8f 122 SUPERFAMILY SSF143120 7 44 7.32E-8 T 14-10-2018 IPR036165 YefM-like superfamily C4901_02465 5c8ef83454569fed9abd0dab40b62d8f 122 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 10 41 2.1E-8 T 14-10-2018 C4901_06250 2bd81aa9e14889884d73d1a44ee17dd6 180 Pfam PF01695 IstB-like ATP binding protein 15 82 1.8E-16 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C4901_06250 2bd81aa9e14889884d73d1a44ee17dd6 180 Gene3D G3DSA:3.40.50.300 7 97 1.0E-12 T 14-10-2018 C4901_14705 97c0244cdb54164774e60bf6cea6315c 105 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 81 92 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_14705 97c0244cdb54164774e60bf6cea6315c 105 Pfam PF12838 4Fe-4S dicluster domain 26 94 7.3E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_14705 97c0244cdb54164774e60bf6cea6315c 105 Gene3D G3DSA:3.30.70.20 10 104 1.3E-11 T 14-10-2018 C4901_14705 97c0244cdb54164774e60bf6cea6315c 105 TIGRFAM TIGR02936 fdxN_nitrog: ferredoxin III, nif-specific 7 100 3.0E-41 T 14-10-2018 IPR014283 Ferredoxin III 4[4Fe-4S], nif-specific C4901_14705 97c0244cdb54164774e60bf6cea6315c 105 SUPERFAMILY SSF54862 14 101 9.0E-15 T 14-10-2018 C4901_02175 746db35688d9ec599db995d675cc65ed 120 SUPERFAMILY SSF75169 9 120 9.89E-25 T 14-10-2018 IPR027396 DsrEFH-like C4901_02175 746db35688d9ec599db995d675cc65ed 120 Gene3D G3DSA:3.40.1260.10 6 120 1.3E-32 T 14-10-2018 IPR027396 DsrEFH-like C4901_02175 746db35688d9ec599db995d675cc65ed 120 Pfam PF02635 DsrE/DsrF-like family 12 120 4.1E-11 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 ProSitePatterns PS00079 Multicopper oxidases signature 1. 160 180 - T 14-10-2018 IPR033138 Multicopper oxidases, conserved site C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 Gene3D G3DSA:2.60.40.420 32 183 5.6E-48 T 14-10-2018 IPR008972 Cupredoxin C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 SUPERFAMILY SSF49503 41 182 9.87E-21 T 14-10-2018 IPR008972 Cupredoxin C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 TIGRFAM TIGR03095 rusti_cyanin: rusticyanin 43 183 1.1E-59 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 99 183 1.2E-6 T 14-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 PRINTS PR00158 Rusticyanin signature 85 104 2.3E-69 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 PRINTS PR00158 Rusticyanin signature 153 175 2.3E-69 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 PRINTS PR00158 Rusticyanin signature 132 150 2.3E-69 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 PRINTS PR00158 Rusticyanin signature 106 125 2.3E-69 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 PRINTS PR00158 Rusticyanin signature 45 65 2.3E-69 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 PRINTS PR00158 Rusticyanin signature 66 83 2.3E-69 T 14-10-2018 IPR001243 Rusticyanin GO:0005507|GO:0009055 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 91 180 0.003 T 14-10-2018 C4901_10690 2e139ca93a784f85f6fec5bb12631173 183 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 159 176 - T 14-10-2018 IPR028871 Blue (type 1) copper protein, binding site C4901_00270 f0d033aecf931673900b672bb84c2405 319 Gene3D G3DSA:3.40.50.2000 164 310 5.4E-39 T 14-10-2018 C4901_00270 f0d033aecf931673900b672bb84c2405 319 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 3 311 3.9E-100 T 14-10-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 C4901_00270 f0d033aecf931673900b672bb84c2405 319 SUPERFAMILY SSF53756 1 310 3.14E-66 T 14-10-2018 C4901_00270 f0d033aecf931673900b672bb84c2405 319 Gene3D G3DSA:3.40.50.2000 1 162 1.1E-53 T 14-10-2018 C4901_00270 f0d033aecf931673900b672bb84c2405 319 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 295 9.6E-50 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_09710 184594d7b9a1d088fc7865a6c9956c27 142 SUPERFAMILY SSF54690 3 136 2.75E-43 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 C4901_09710 184594d7b9a1d088fc7865a6c9956c27 142 Gene3D G3DSA:3.90.1170.40 1 140 1.1E-42 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 C4901_09710 184594d7b9a1d088fc7865a6c9956c27 142 Pfam PF02391 MoaE protein 7 117 2.7E-32 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 C4901_10800 047391de0267ff263e3ce7fb17694d43 404 SUPERFAMILY SSF55681 2 300 5.77E-87 T 14-10-2018 C4901_10800 047391de0267ff263e3ce7fb17694d43 404 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 3 364 1.4E-124 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 C4901_10800 047391de0267ff263e3ce7fb17694d43 404 Gene3D G3DSA:3.40.50.800 304 373 3.3E-8 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C4901_10800 047391de0267ff263e3ce7fb17694d43 404 PIRSF PIRSF001549 1 394 2.0E-93 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 C4901_10800 047391de0267ff263e3ce7fb17694d43 404 SUPERFAMILY SSF52954 309 361 1.46E-6 T 14-10-2018 C4901_10800 047391de0267ff263e3ce7fb17694d43 404 Pfam PF13393 Histidyl-tRNA synthetase 2 294 8.0E-41 T 14-10-2018 C4901_10800 047391de0267ff263e3ce7fb17694d43 404 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 403 25.728 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 C4901_10800 047391de0267ff263e3ce7fb17694d43 404 Gene3D G3DSA:3.30.930.10 1 303 3.0E-98 T 14-10-2018 C4901_16595 dc749b82045053c93cbff0e27e2374a6 463 ProSitePatterns PS01219 Ammonium transporters signature. 219 244 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 C4901_16595 dc749b82045053c93cbff0e27e2374a6 463 Pfam PF00909 Ammonium Transporter Family 66 462 2.6E-125 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 C4901_16595 dc749b82045053c93cbff0e27e2374a6 463 Gene3D G3DSA:1.10.3430.10 40 463 2.3E-153 T 14-10-2018 IPR029020 Ammonium/urea transporter C4901_16595 dc749b82045053c93cbff0e27e2374a6 463 TIGRFAM TIGR00836 amt: ammonium transporter 64 462 3.5E-141 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 C4901_16595 dc749b82045053c93cbff0e27e2374a6 463 SUPERFAMILY SSF111352 60 443 4.45E-134 T 14-10-2018 C4901_02210 15161595dc2daaa7aca3c1509bfa2231 247 Pfam PF01925 Sulfite exporter TauE/SafE 6 240 3.0E-44 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C4901_08190 a548b97c03376b98678eef75565b620b 404 PIRSF PIRSF033563 1 403 3.8E-108 T 14-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 C4901_08190 a548b97c03376b98678eef75565b620b 404 Pfam PF06245 Protein of unknown function (DUF1015) 4 399 6.4E-112 T 14-10-2018 IPR008323 Uncharacterised conserved protein UCP033563 C4901_08635 ed97f768fdfe0954364a39dc2c85a0e9 177 Pfam PF04982 HPP family 54 159 2.5E-18 T 14-10-2018 IPR007065 HPP C4901_02650 3a1771a11a5c82f15287d372e8347af5 313 Pfam PF03631 Virulence factor BrkB 32 284 1.1E-63 T 14-10-2018 IPR017039 Virulence factor BrkB C4901_02650 3a1771a11a5c82f15287d372e8347af5 313 PIRSF PIRSF035875 10 306 5.2E-69 T 14-10-2018 IPR017039 Virulence factor BrkB C4901_02650 3a1771a11a5c82f15287d372e8347af5 313 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 24 283 9.2E-39 T 14-10-2018 IPR017039 Virulence factor BrkB C4901_00535 259973f49e6c78793eaa47a60d90aa59 150 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 150 7.4E-55 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C4901_00535 259973f49e6c78793eaa47a60d90aa59 150 Gene3D G3DSA:2.40.50.100 73 150 3.1E-30 T 14-10-2018 C4901_00535 259973f49e6c78793eaa47a60d90aa59 150 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 106 123 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_00535 259973f49e6c78793eaa47a60d90aa59 150 Pfam PF00364 Biotin-requiring enzyme 76 149 1.1E-23 T 14-10-2018 IPR000089 Biotin/lipoyl attachment C4901_00535 259973f49e6c78793eaa47a60d90aa59 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 96 110 1.4E-17 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C4901_00535 259973f49e6c78793eaa47a60d90aa59 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 79 92 1.4E-17 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C4901_00535 259973f49e6c78793eaa47a60d90aa59 150 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 111 124 1.4E-17 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 C4901_00535 259973f49e6c78793eaa47a60d90aa59 150 SUPERFAMILY SSF51230 75 150 1.05E-24 T 14-10-2018 IPR011053 Single hybrid motif C4901_11585 e39f6bd49bf7be8ae68762f3cd4beb9a 86 SUPERFAMILY SSF46955 9 58 3.3E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_11585 e39f6bd49bf7be8ae68762f3cd4beb9a 86 Pfam PF12728 Helix-turn-helix domain 10 57 4.7E-8 T 14-10-2018 C4901_02925 1a511278a398c91330514142af812f85 418 Pfam PF00665 Integrase core domain 193 301 4.6E-10 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_02925 1a511278a398c91330514142af812f85 418 Gene3D G3DSA:3.30.420.10 195 314 1.2E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_02925 1a511278a398c91330514142af812f85 418 SUPERFAMILY SSF53098 187 333 2.73E-14 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_11455 1238c9503d4cdd0dcca7654adf4970dd 707 Gene3D G3DSA:3.40.50.300 25 222 2.9E-8 T 14-10-2018 C4901_11455 1238c9503d4cdd0dcca7654adf4970dd 707 SUPERFAMILY SSF52540 44 402 3.3E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11455 1238c9503d4cdd0dcca7654adf4970dd 707 Gene3D G3DSA:3.40.50.300 257 433 4.5E-8 T 14-10-2018 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 SMART SM00926 13 67 2.8E-15 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Pfam PF01568 Molydopterin dinucleotide binding domain 779 860 6.4E-9 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Gene3D G3DSA:3.40.228.10 154 257 1.2E-42 T 14-10-2018 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Gene3D G3DSA:3.40.228.10 304 424 1.4E-11 T 14-10-2018 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 15 62 1.0E-12 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Pfam PF00384 Molybdopterin oxidoreductase 70 583 1.5E-34 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Gene3D G3DSA:3.40.50.740 463 639 2.6E-14 T 14-10-2018 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Gene3D G3DSA:3.40.50.740 72 153 1.2E-42 T 14-10-2018 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Gene3D G3DSA:2.20.25.90 8 71 8.1E-15 T 14-10-2018 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 SUPERFAMILY SSF50692 769 924 7.69E-28 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 SUPERFAMILY SSF53706 10 581 3.66E-135 T 14-10-2018 C4901_09680 84281e21d4e10efbac8ae5df92a60372 949 Gene3D G3DSA:2.40.40.20 751 917 1.7E-23 T 14-10-2018 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Gene3D G3DSA:3.40.50.800 531 630 2.6E-27 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 361 384 6.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 463 491 6.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 533 545 6.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 328 356 6.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 506 519 6.6E-54 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Pfam PF03129 Anticodon binding domain 540 621 5.9E-19 T 14-10-2018 IPR004154 Anticodon-binding C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 SUPERFAMILY SSF55681 242 525 6.45E-95 T 14-10-2018 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 633 33.746 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 320 528 1.6E-43 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 3.1E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 SUPERFAMILY SSF81271 3 61 2.91E-13 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Gene3D G3DSA:3.30.54.20 130 186 1.3E-61 T 14-10-2018 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 SMART SM00863 169 218 4.7E-26 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Pfam PF02824 TGS domain 4 61 1.0E-6 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Gene3D G3DSA:3.30.980.10 69 221 1.3E-61 T 14-10-2018 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Gene3D G3DSA:3.30.930.10 222 530 3.5E-122 T 14-10-2018 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 SUPERFAMILY SSF52954 529 627 4.23E-28 T 14-10-2018 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 626 3.8E-211 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 Gene3D G3DSA:3.10.20.30 3 63 1.5E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_05565 a171d1d13d7d5f35bbcc300b6590e9b3 639 SUPERFAMILY SSF55186 63 240 6.41E-63 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 C4901_16360 64865eb306a60a1913cc889a060b03fa 293 ProSitePatterns PS00380 Rhodanese signature 1. 29 40 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 C4901_16360 64865eb306a60a1913cc889a060b03fa 293 SMART SM00450 4 122 3.5E-9 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_16360 64865eb306a60a1913cc889a060b03fa 293 SMART SM00450 146 274 2.0E-23 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_16360 64865eb306a60a1913cc889a060b03fa 293 SUPERFAMILY SSF52821 149 282 1.11E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_16360 64865eb306a60a1913cc889a060b03fa 293 Gene3D G3DSA:3.40.250.10 1 137 3.0E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_16360 64865eb306a60a1913cc889a060b03fa 293 Pfam PF00581 Rhodanese-like domain 148 270 2.5E-15 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_16360 64865eb306a60a1913cc889a060b03fa 293 Pfam PF00581 Rhodanese-like domain 16 118 1.3E-16 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_16360 64865eb306a60a1913cc889a060b03fa 293 Gene3D G3DSA:3.40.250.10 139 282 8.8E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_16360 64865eb306a60a1913cc889a060b03fa 293 SUPERFAMILY SSF52821 1 173 3.54E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_03555 2d3ec61958d195c1dfd29f1a87ffa5a8 180 Gene3D G3DSA:3.40.50.300 2 177 7.2E-17 T 14-10-2018 C4901_03555 2d3ec61958d195c1dfd29f1a87ffa5a8 180 Pfam PF00071 Ras family 60 171 8.8E-6 T 14-10-2018 IPR001806 Small GTPase GO:0003924|GO:0005525 C4901_03555 2d3ec61958d195c1dfd29f1a87ffa5a8 180 SUPERFAMILY SSF52540 3 174 6.88E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15015 97d718f53f591e18eb466154367873dd 511 Gene3D G3DSA:3.30.390.50 256 333 2.9E-6 T 14-10-2018 C4901_15015 97d718f53f591e18eb466154367873dd 511 Gene3D G3DSA:3.30.930.10 20 240 1.4E-18 T 14-10-2018 C4901_15015 97d718f53f591e18eb466154367873dd 511 Pfam PF01976 Protein of unknown function DUF116 374 449 3.8E-6 T 14-10-2018 IPR002829 Protein of unknown function DUF116 C4901_15015 97d718f53f591e18eb466154367873dd 511 SUPERFAMILY SSF55681 16 229 2.49E-22 T 14-10-2018 C4901_04300 42ae5cdf178416b552c0c1d1e91b4f92 272 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 14 268 38.383 T 14-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 C4901_04300 42ae5cdf178416b552c0c1d1e91b4f92 272 Gene3D G3DSA:3.10.270.10 25 272 3.8E-103 T 14-10-2018 C4901_04300 42ae5cdf178416b552c0c1d1e91b4f92 272 Pfam PF02649 Type I GTP cyclohydrolase folE2 15 263 1.2E-99 T 14-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 C4901_09820 e980d1d324275a580a4603ac589e1c5e 785 SUPERFAMILY SSF48208 276 671 1.84E-65 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 C4901_09820 e980d1d324275a580a4603ac589e1c5e 785 SUPERFAMILY SSF74650 6 266 1.38E-54 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 C4901_09820 e980d1d324275a580a4603ac589e1c5e 785 Gene3D G3DSA:1.50.10.10 273 689 2.5E-147 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 C4901_09820 e980d1d324275a580a4603ac589e1c5e 785 Gene3D G3DSA:2.70.98.10 1 264 1.2E-67 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 C4901_09820 e980d1d324275a580a4603ac589e1c5e 785 Pfam PF09137 Glucodextranase, domain N 6 264 9.1E-72 T 14-10-2018 IPR015220 Glucodextranase, N-terminal KEGG: 00500+3.2.1.3|MetaCyc: PWY-5941 C4901_09820 e980d1d324275a580a4603ac589e1c5e 785 Pfam PF00723 Glycosyl hydrolases family 15 370 585 8.2E-11 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 C4901_09820 e980d1d324275a580a4603ac589e1c5e 785 Pfam PF00723 Glycosyl hydrolases family 15 282 349 7.3E-8 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 Gene3D G3DSA:3.40.50.300 1 68 3.9E-14 T 14-10-2018 C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 193 210 3.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 176 193 3.6E-5 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 Gene3D G3DSA:1.10.10.60 160 209 3.9E-12 T 14-10-2018 C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 Gene3D G3DSA:1.10.8.60 69 145 7.5E-20 T 14-10-2018 C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 Pfam PF00158 Sigma-54 interaction domain 1 63 4.1E-16 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 Pfam PF02954 Bacterial regulatory protein, Fis family 177 205 2.1E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 SUPERFAMILY SSF52540 1 140 4.59E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 110 119 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site C4901_06015 0613ad83fff1ddfbdbadbeec010a866c 210 SUPERFAMILY SSF46689 159 207 3.33E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_05140 ce04263b107f9a51665654676b4f7f2b 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.408 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_05140 ce04263b107f9a51665654676b4f7f2b 88 SUPERFAMILY SSF46992 3 84 1.26E-26 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_05140 ce04263b107f9a51665654676b4f7f2b 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 83 7.0E-14 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_05140 ce04263b107f9a51665654676b4f7f2b 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 4.7E-22 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_05140 ce04263b107f9a51665654676b4f7f2b 88 Gene3D G3DSA:1.20.58.110 1 86 2.3E-26 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_05140 ce04263b107f9a51665654676b4f7f2b 88 Pfam PF01649 Ribosomal protein S20 2 83 2.8E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_13015 61ad2efe72fb8d8bb4bce280c4477725 132 TIGRFAM TIGR04485 thiosulf_SoxX: sulfur oxidation c-type cytochrome SoxX 57 132 7.7E-25 T 14-10-2018 IPR030999 Sulfur oxidation c-type cytochrome SoxX C4901_13015 61ad2efe72fb8d8bb4bce280c4477725 132 SUPERFAMILY SSF46626 20 132 1.58E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13015 61ad2efe72fb8d8bb4bce280c4477725 132 Gene3D G3DSA:1.10.760.10 42 132 1.3E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_13015 61ad2efe72fb8d8bb4bce280c4477725 132 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 59 129 6.1E-7 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04870 cab97563704755c2eac8a1d2edaf1092 338 Gene3D G3DSA:1.10.150.130 58 169 2.6E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_04870 cab97563704755c2eac8a1d2edaf1092 338 Gene3D G3DSA:1.10.443.10 170 334 8.6E-33 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_04870 cab97563704755c2eac8a1d2edaf1092 338 SUPERFAMILY SSF56349 64 332 1.82E-57 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_04870 cab97563704755c2eac8a1d2edaf1092 338 Pfam PF00589 Phage integrase family 170 329 1.4E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_06700 096909607138e4022af409c47e186aef 403 Gene3D G3DSA:3.40.50.150 1 221 5.3E-50 T 14-10-2018 C4901_06700 096909607138e4022af409c47e186aef 403 Pfam PF08241 Methyltransferase domain 45 137 1.5E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C4901_06700 096909607138e4022af409c47e186aef 403 SUPERFAMILY SSF53335 5 186 5.47E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_00795 c7fe69740c944d257b4bb6af650aa513 303 PIRSF PIRSF026649 5 303 1.7E-93 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C4901_00795 c7fe69740c944d257b4bb6af650aa513 303 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 20 294 1.4E-63 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C4901_00330 427f4ed6a41d5caa916b57e10e1ec08a 404 Pfam PF00534 Glycosyl transferases group 1 215 374 1.0E-26 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_00330 427f4ed6a41d5caa916b57e10e1ec08a 404 Gene3D G3DSA:3.40.50.2000 37 200 1.0E-94 T 14-10-2018 C4901_00330 427f4ed6a41d5caa916b57e10e1ec08a 404 Gene3D G3DSA:3.40.50.2000 201 360 1.0E-94 T 14-10-2018 C4901_00330 427f4ed6a41d5caa916b57e10e1ec08a 404 SUPERFAMILY SSF53756 27 396 2.11E-73 T 14-10-2018 C4901_00330 427f4ed6a41d5caa916b57e10e1ec08a 404 Pfam PF13439 Glycosyltransferase Family 4 39 202 3.2E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C4901_09800 41c5cfeea7a619cd67f6daf39cc04cf7 211 Pfam PF02798 Glutathione S-transferase, N-terminal domain 9 80 3.0E-12 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_09800 41c5cfeea7a619cd67f6daf39cc04cf7 211 SUPERFAMILY SSF52833 5 90 7.48E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_09800 41c5cfeea7a619cd67f6daf39cc04cf7 211 Gene3D G3DSA:3.40.30.10 12 201 4.5E-45 T 14-10-2018 C4901_09800 41c5cfeea7a619cd67f6daf39cc04cf7 211 Gene3D G3DSA:1.20.1050.10 89 196 4.5E-45 T 14-10-2018 C4901_09800 41c5cfeea7a619cd67f6daf39cc04cf7 211 SUPERFAMILY SSF47616 94 204 3.9E-17 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C4901_05850 8a562ed2ad0f0e72bb7eeefc8a30aa36 373 ProSitePatterns PS00216 Sugar transport proteins signature 1. 243 259 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C4901_05850 8a562ed2ad0f0e72bb7eeefc8a30aa36 373 Gene3D G3DSA:1.20.1250.20 2 166 2.0E-22 T 14-10-2018 C4901_05850 8a562ed2ad0f0e72bb7eeefc8a30aa36 373 Gene3D G3DSA:1.20.1250.20 184 367 4.7E-24 T 14-10-2018 C4901_05850 8a562ed2ad0f0e72bb7eeefc8a30aa36 373 Pfam PF07690 Major Facilitator Superfamily 4 235 1.4E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_05850 8a562ed2ad0f0e72bb7eeefc8a30aa36 373 SUPERFAMILY SSF103473 4 362 6.93E-54 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_16945 9df1dc3775782a5964c7f5d575f97872 274 SUPERFAMILY SSF117782 165 252 1.31E-14 T 14-10-2018 IPR035439 UPF0145 domain superfamily C4901_16945 9df1dc3775782a5964c7f5d575f97872 274 SUPERFAMILY SSF117782 46 130 2.35E-15 T 14-10-2018 IPR035439 UPF0145 domain superfamily C4901_16945 9df1dc3775782a5964c7f5d575f97872 274 Pfam PF01906 Putative heavy-metal-binding 169 252 1.1E-10 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 C4901_16945 9df1dc3775782a5964c7f5d575f97872 274 Pfam PF01906 Putative heavy-metal-binding 73 129 1.8E-10 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 C4901_16945 9df1dc3775782a5964c7f5d575f97872 274 Gene3D G3DSA:3.30.110.70 40 133 4.6E-13 T 14-10-2018 C4901_16945 9df1dc3775782a5964c7f5d575f97872 274 Gene3D G3DSA:3.30.110.70 161 254 7.9E-12 T 14-10-2018 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 9.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 9.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 9.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 Pfam PF00672 HAMP domain 164 212 2.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 SUPERFAMILY SSF55874 279 416 1.01E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 SMART SM00387 314 418 2.2E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 220 273 1.1E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 SMART SM00388 217 276 2.6E-6 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 Gene3D G3DSA:1.10.287.130 161 271 1.7E-19 T 14-10-2018 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 SMART SM00304 164 216 8.1E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 SUPERFAMILY SSF158472 164 213 5.75E-5 T 14-10-2018 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 SUPERFAMILY SSF47384 201 273 2.75E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 Gene3D G3DSA:3.30.565.10 281 421 3.2E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_09635 e27b852c7a39cf4bf6424d66cffb8195 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 319 417 7.3E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_06880 295752ca92d3cfd82726acab6c52db2f 107 SUPERFAMILY SSF47413 45 96 1.66E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_06880 295752ca92d3cfd82726acab6c52db2f 107 Gene3D G3DSA:1.10.260.40 2 104 4.1E-15 T 14-10-2018 C4901_14435 88f08b5ffd3c2a671aa9fce86dc63242 149 Pfam PF05425 Copper resistance protein D 44 145 1.7E-13 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 C4901_14675 0fa6b11e256711967c27d50b92bcd6a8 155 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_14675 0fa6b11e256711967c27d50b92bcd6a8 155 SUPERFAMILY SSF54862 3 114 4.86E-22 T 14-10-2018 C4901_14675 0fa6b11e256711967c27d50b92bcd6a8 155 Gene3D G3DSA:3.30.720.40 74 154 1.1E-27 T 14-10-2018 IPR038465 APS reductase, beta subunit, C-terminal domain superfamily C4901_14675 0fa6b11e256711967c27d50b92bcd6a8 155 Pfam PF12139 Adenosine-5'-phosphosulfate reductase beta subunit 71 143 1.7E-29 T 14-10-2018 IPR022738 Adenylylsulphate reductase, beta subunit, C-terminal C4901_14675 0fa6b11e256711967c27d50b92bcd6a8 155 TIGRFAM TIGR02060 aprB: adenylylsulfate reductase, beta subunit 1 140 7.5E-61 T 14-10-2018 IPR011802 Adenylylsulphate reductase, beta subunit C4901_14675 0fa6b11e256711967c27d50b92bcd6a8 155 Pfam PF13187 4Fe-4S dicluster domain 9 68 4.3E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_14675 0fa6b11e256711967c27d50b92bcd6a8 155 Gene3D G3DSA:3.30.70.20 2 73 1.6E-27 T 14-10-2018 C4901_12075 ecc8c85efcd16575237e9bd6dfa4fb4f 367 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 8 364 58.285 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C4901_12075 ecc8c85efcd16575237e9bd6dfa4fb4f 367 SUPERFAMILY SSF53383 17 363 2.2E-82 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_12075 ecc8c85efcd16575237e9bd6dfa4fb4f 367 Pfam PF00155 Aminotransferase class I and II 38 360 1.6E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C4901_12075 ecc8c85efcd16575237e9bd6dfa4fb4f 367 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 12 362 1.3E-108 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 C4901_12075 ecc8c85efcd16575237e9bd6dfa4fb4f 367 Gene3D G3DSA:3.40.640.10 49 273 1.9E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_12075 ecc8c85efcd16575237e9bd6dfa4fb4f 367 Gene3D G3DSA:3.90.1150.10 26 356 1.9E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_12425 67c759c3a0e202b728aa3bb4af688e03 279 Gene3D G3DSA:1.10.620.20 13 242 1.0E-13 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 C4901_12425 67c759c3a0e202b728aa3bb4af688e03 279 SUPERFAMILY SSF47240 10 197 4.42E-29 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_00610 ce109f608ca152b3c74f2a6f2e5578b6 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 287 302 1.2E-6 T 14-10-2018 C4901_00610 ce109f608ca152b3c74f2a6f2e5578b6 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 1.2E-6 T 14-10-2018 C4901_00610 ce109f608ca152b3c74f2a6f2e5578b6 439 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.2E-6 T 14-10-2018 C4901_00610 ce109f608ca152b3c74f2a6f2e5578b6 439 SUPERFAMILY SSF51905 5 362 7.98E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_00610 ce109f608ca152b3c74f2a6f2e5578b6 439 Pfam PF04820 Tryptophan halogenase 95 355 1.1E-21 T 14-10-2018 IPR006905 Flavin-dependent halogenase C4901_00610 ce109f608ca152b3c74f2a6f2e5578b6 439 Pfam PF04820 Tryptophan halogenase 6 85 5.8E-8 T 14-10-2018 IPR006905 Flavin-dependent halogenase C4901_00610 ce109f608ca152b3c74f2a6f2e5578b6 439 Gene3D G3DSA:3.50.50.60 3 409 6.3E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_15640 e04dd348c73dda6245f6c5e5d30648b2 540 Gene3D G3DSA:3.10.105.10 287 503 2.0E-36 T 14-10-2018 C4901_15640 e04dd348c73dda6245f6c5e5d30648b2 540 SUPERFAMILY SSF53850 40 535 6.52E-77 T 14-10-2018 C4901_15640 e04dd348c73dda6245f6c5e5d30648b2 540 Gene3D G3DSA:3.40.190.10 21 269 9.6E-38 T 14-10-2018 C4901_15640 e04dd348c73dda6245f6c5e5d30648b2 540 PIRSF PIRSF002741 34 536 8.1E-45 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 C4901_15640 e04dd348c73dda6245f6c5e5d30648b2 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 450 4.3E-47 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain C4901_12705 ea890caa475eadaa259cea6ea3f21d8f 253 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 53 75 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C4901_12705 ea890caa475eadaa259cea6ea3f21d8f 253 Pfam PF01066 CDP-alcohol phosphatidyltransferase 12 75 2.5E-14 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C4901_12705 ea890caa475eadaa259cea6ea3f21d8f 253 Gene3D G3DSA:1.20.120.1760 7 132 3.3E-15 T 14-10-2018 C4901_12705 ea890caa475eadaa259cea6ea3f21d8f 253 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 19 179 2.2E-37 T 14-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 SUPERFAMILY SSF102114 116 369 3.27E-46 T 14-10-2018 C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 Gene3D G3DSA:2.40.50.140 380 440 1.4E-15 T 14-10-2018 C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 11 437 4.9E-95 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 10 436 2.3E-153 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 Gene3D G3DSA:3.40.50.12160 10 127 1.0E-25 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 Pfam PF00919 Uncharacterized protein family UPF0004 11 100 1.0E-18 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 9 439 56.293 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 Gene3D G3DSA:3.80.30.20 138 379 5.8E-65 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 Pfam PF04055 Radical SAM superfamily 146 323 2.3E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_14440 f348aa5169f27dc996e2211a6b2932ff 451 SMART SM00729 140 365 1.7E-44 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_12020 d7f23be49ec4569dadf8fdde5a061891 470 Pfam PF00483 Nucleotidyl transferase 5 280 4.6E-63 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C4901_12020 d7f23be49ec4569dadf8fdde5a061891 470 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3 463 8.9E-202 T 14-10-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 C4901_12020 d7f23be49ec4569dadf8fdde5a061891 470 Gene3D G3DSA:2.60.120.10 345 454 1.5E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_12020 d7f23be49ec4569dadf8fdde5a061891 470 SUPERFAMILY SSF51182 180 463 1.9E-82 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_12020 d7f23be49ec4569dadf8fdde5a061891 470 Pfam PF01050 Mannose-6-phosphate isomerase 309 459 1.8E-68 T 14-10-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 C4901_12020 d7f23be49ec4569dadf8fdde5a061891 470 SUPERFAMILY SSF53448 3 275 3.03E-67 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_12020 d7f23be49ec4569dadf8fdde5a061891 470 Gene3D G3DSA:3.90.550.10 1 344 1.3E-115 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_14540 2d835325c660e6d583a2df1c2614b1c2 436 Pfam PF08886 Glutamate-cysteine ligase 25 428 7.7E-185 T 14-10-2018 IPR011718 Glutamate--cysteine ligase GshA C4901_14540 2d835325c660e6d583a2df1c2614b1c2 436 TIGRFAM TIGR02049 gshA_ferroox: glutamate--cysteine ligase 26 429 1.5E-172 T 14-10-2018 IPR011718 Glutamate--cysteine ligase GshA C4901_14540 2d835325c660e6d583a2df1c2614b1c2 436 Gene3D G3DSA:3.40.50.11280 73 210 4.8E-45 T 14-10-2018 C4901_13965 fb4a1f5a5362be01142c903efe8e2c29 158 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 158 1.3E-56 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 C4901_13965 fb4a1f5a5362be01142c903efe8e2c29 158 Hamap MF_00984 Single-stranded DNA-binding protein. 5 113 39.22 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 C4901_13965 fb4a1f5a5362be01142c903efe8e2c29 158 Pfam PF00436 Single-strand binding protein family 5 109 1.1E-43 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 C4901_13965 fb4a1f5a5362be01142c903efe8e2c29 158 SUPERFAMILY SSF50249 3 158 1.92E-60 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_13965 fb4a1f5a5362be01142c903efe8e2c29 158 Gene3D G3DSA:2.40.50.140 1 120 2.2E-50 T 14-10-2018 C4901_04680 d53546e841356f8ba5e005cc49f05aaf 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_04680 d53546e841356f8ba5e005cc49f05aaf 89 SMART SM01387 8 88 2.3E-45 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_04680 d53546e841356f8ba5e005cc49f05aaf 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.159 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04680 d53546e841356f8ba5e005cc49f05aaf 89 SUPERFAMILY SSF47060 4 89 2.88E-32 T 14-10-2018 IPR009068 S15/NS1, RNA-binding C4901_04680 d53546e841356f8ba5e005cc49f05aaf 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 8.0E-25 T 14-10-2018 C4901_04680 d53546e841356f8ba5e005cc49f05aaf 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.9E-36 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04680 d53546e841356f8ba5e005cc49f05aaf 89 Gene3D G3DSA:1.10.287.10 1 89 7.6E-33 T 14-10-2018 C4901_04680 d53546e841356f8ba5e005cc49f05aaf 89 Pfam PF00312 Ribosomal protein S15 8 88 4.0E-33 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_13485 e904d59af044fff741aa5bf505a644f7 428 Gene3D G3DSA:1.50.10.10 69 418 8.8E-117 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 C4901_13485 e904d59af044fff741aa5bf505a644f7 428 PRINTS PR00735 Glycosyl hydrolase family 8 signature 264 275 2.9E-12 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C4901_13485 e904d59af044fff741aa5bf505a644f7 428 PRINTS PR00735 Glycosyl hydrolase family 8 signature 389 403 2.9E-12 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C4901_13485 e904d59af044fff741aa5bf505a644f7 428 PRINTS PR00735 Glycosyl hydrolase family 8 signature 98 111 2.9E-12 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C4901_13485 e904d59af044fff741aa5bf505a644f7 428 PRINTS PR00735 Glycosyl hydrolase family 8 signature 160 178 2.9E-12 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C4901_13485 e904d59af044fff741aa5bf505a644f7 428 PRINTS PR00735 Glycosyl hydrolase family 8 signature 288 297 2.9E-12 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C4901_13485 e904d59af044fff741aa5bf505a644f7 428 Pfam PF01270 Glycosyl hydrolases family 8 69 401 3.5E-56 T 14-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 C4901_13485 e904d59af044fff741aa5bf505a644f7 428 SUPERFAMILY SSF48208 58 408 1.36E-81 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 C4901_09835 3923d41bd2bdb762c4de6f4f2af9b135 382 Pfam PF07690 Major Facilitator Superfamily 15 337 2.1E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_09835 3923d41bd2bdb762c4de6f4f2af9b135 382 Gene3D G3DSA:1.20.1250.20 195 374 1.5E-18 T 14-10-2018 C4901_09835 3923d41bd2bdb762c4de6f4f2af9b135 382 SUPERFAMILY SSF103473 5 375 1.31E-25 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_09835 3923d41bd2bdb762c4de6f4f2af9b135 382 Gene3D G3DSA:1.20.1250.20 5 188 9.0E-9 T 14-10-2018 C4901_03570 f1b702e920585de7a5dc321eaf08fb8a 135 Gene3D G3DSA:3.30.450.30 14 135 5.4E-28 T 14-10-2018 C4901_03570 f1b702e920585de7a5dc321eaf08fb8a 135 SUPERFAMILY SSF103196 13 132 8.72E-29 T 14-10-2018 C4901_03570 f1b702e920585de7a5dc321eaf08fb8a 135 Pfam PF03259 Roadblock/LC7 domain 29 106 3.9E-17 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain C4901_03570 f1b702e920585de7a5dc321eaf08fb8a 135 SMART SM00960 18 107 8.8E-22 T 14-10-2018 IPR004942 Roadblock/LAMTOR2 domain C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 SMART SM00387 313 425 1.0E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 SUPERFAMILY SSF55874 258 423 5.5E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 421 2.3E-113 T 14-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 423 2.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 Gene3D G3DSA:3.30.565.10 294 427 1.5E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 Gene3D G3DSA:1.10.287.130 196 269 2.3E-21 T 14-10-2018 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 SUPERFAMILY SSF47384 190 268 6.87E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 3.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 Pfam PF13188 PAS domain 97 149 4.5E-5 T 14-10-2018 IPR000014 PAS domain C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 SMART SM00388 202 269 2.0E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 Pfam PF11808 Domain of unknown function (DUF3329) 6 88 1.0E-13 T 14-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 3.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.1E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_00925 0d1f808d2dfc7ee906e4cffc34dc4cca 440 SUPERFAMILY SSF55785 86 154 8.55E-7 T 14-10-2018 IPR035965 PAS domain superfamily C4901_07800 0a610c9887744bb76a588c0b9bb2e064 122 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 51 71 - T 14-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 C4901_07800 0a610c9887744bb76a588c0b9bb2e064 122 PIRSF PIRSF002030 1 122 1.4E-42 T 14-10-2018 IPR016339 Truncated hemoglobin, group 1 C4901_07800 0a610c9887744bb76a588c0b9bb2e064 122 Pfam PF01152 Bacterial-like globin 5 111 1.4E-16 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 C4901_07800 0a610c9887744bb76a588c0b9bb2e064 122 SUPERFAMILY SSF46458 5 121 5.38E-35 T 14-10-2018 IPR009050 Globin-like superfamily C4901_07800 0a610c9887744bb76a588c0b9bb2e064 122 Gene3D G3DSA:1.10.490.10 1 122 4.3E-41 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 C4901_13975 a963f6be195a29ee133b7248a3045814 237 SUPERFAMILY SSF102522 1 142 1.44E-46 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal C4901_13975 a963f6be195a29ee133b7248a3045814 237 Gene3D G3DSA:2.40.30.90 154 236 7.1E-18 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal C4901_13975 a963f6be195a29ee133b7248a3045814 237 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 2 232 1.2E-64 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase C4901_13975 a963f6be195a29ee133b7248a3045814 237 SUPERFAMILY SSF101852 151 235 1.29E-14 T 14-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal C4901_13975 a963f6be195a29ee133b7248a3045814 237 PIRSF PIRSF006779 1 236 1.6E-50 T 14-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase C4901_13975 a963f6be195a29ee133b7248a3045814 237 Gene3D G3DSA:3.40.50.10790 1 148 2.3E-46 T 14-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 SMART SM01209 103 294 1.2E-118 T 14-10-2018 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 2.1E-156 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 SUPERFAMILY SSF51246 327 419 1.1E-25 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 Gene3D G3DSA:3.30.1490.20 121 189 1.2E-21 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 Gene3D G3DSA:3.30.470.20 191 326 3.2E-51 T 14-10-2018 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 SUPERFAMILY SSF52440 1 103 1.28E-34 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 SMART SM01210 328 420 2.2E-38 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 SUPERFAMILY SSF56059 104 320 1.29E-54 T 14-10-2018 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 329 418 1.3E-25 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 Gene3D G3DSA:3.40.50.20 2 95 3.5E-36 T 14-10-2018 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.3E-33 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 Gene3D G3DSA:3.90.600.10 328 423 1.1E-30 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 294 2.3E-70 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 288 295 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_00500 cb09073e45200e8bebecd3ada1bd3e94 424 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 420 40.513 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 C4901_15885 7c2774593b3ce9005fc1ab8c2386b999 688 PIRSF PIRSF006402 1 687 1.2E-198 T 14-10-2018 IPR024705 Spermatogenesis-associated protein 20 C4901_15885 7c2774593b3ce9005fc1ab8c2386b999 688 SUPERFAMILY SSF48208 197 551 2.04E-64 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 C4901_15885 7c2774593b3ce9005fc1ab8c2386b999 688 Gene3D G3DSA:1.50.10.10 220 339 2.4E-6 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 C4901_15885 7c2774593b3ce9005fc1ab8c2386b999 688 SUPERFAMILY SSF52833 4 136 9.69E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_15885 7c2774593b3ce9005fc1ab8c2386b999 688 Gene3D G3DSA:3.40.30.10 6 174 1.5E-57 T 14-10-2018 C4901_15885 7c2774593b3ce9005fc1ab8c2386b999 688 Pfam PF03190 Protein of unknown function, DUF255 7 168 1.4E-67 T 14-10-2018 IPR004879 Domain of unknown function DUF255 C4901_11325 da645d4d0aca46816e43357352eb694a 370 PIRSF PIRSF001259 2 370 1.0E-112 T 14-10-2018 C4901_11325 da645d4d0aca46816e43357352eb694a 370 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 4.2E-74 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11325 da645d4d0aca46816e43357352eb694a 370 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 9.2E-84 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11325 da645d4d0aca46816e43357352eb694a 370 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 39.162 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11325 da645d4d0aca46816e43357352eb694a 370 SUPERFAMILY SSF55821 2 202 5.49E-85 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily C4901_11325 da645d4d0aca46816e43357352eb694a 370 SUPERFAMILY SSF142695 205 363 2.35E-34 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C4901_11325 da645d4d0aca46816e43357352eb694a 370 Pfam PF00925 GTP cyclohydrolase II 211 362 2.4E-26 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 C4901_11325 da645d4d0aca46816e43357352eb694a 370 Gene3D G3DSA:3.90.870.10 1 206 2.1E-89 T 14-10-2018 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 283 7.5E-131 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 282 38.266 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 Gene3D G3DSA:3.90.226.10 26 287 8.0E-84 T 14-10-2018 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 Pfam PF01039 Carboxyl transferase domain 97 241 2.6E-15 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 9.5E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 9.5E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 9.5E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 9.5E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 9.5E-41 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 C4901_12800 e35177f2afed7679dcccae75f08d05a6 297 SUPERFAMILY SSF52096 26 284 8.71E-87 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 SMART SM00100 24 142 7.5E-9 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 SUPERFAMILY SSF46785 161 237 6.48E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 Pfam PF00027 Cyclic nucleotide-binding domain 44 128 7.3E-12 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 SMART SM00419 181 229 6.2E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 Gene3D G3DSA:1.10.10.10 159 239 1.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 Gene3D G3DSA:2.60.120.10 37 157 2.1E-37 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 Pfam PF13545 Crp-like helix-turn-helix domain 163 236 7.3E-19 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 SUPERFAMILY SSF51206 17 156 8.9E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 203 218 5.4E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C4901_01220 c8681ac93413d5730778edb16db3f5b1 244 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 187 203 5.4E-12 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 C4901_01075 c958fd4adc005585f7ec9a9f95cf87dd 313 Pfam PF00535 Glycosyl transferase family 2 6 168 2.0E-32 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_01075 c958fd4adc005585f7ec9a9f95cf87dd 313 SUPERFAMILY SSF53448 2 253 3.46E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_01075 c958fd4adc005585f7ec9a9f95cf87dd 313 Gene3D G3DSA:3.90.550.10 1 221 1.6E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_05135 c3b541db18070032c18d3c535baf4eae 371 TIGRFAM TIGR01027 proB: glutamate 5-kinase 9 370 1.0E-131 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 SUPERFAMILY SSF88697 279 370 8.7E-24 T 14-10-2018 IPR015947 PUA-like superfamily C4901_05135 c3b541db18070032c18d3c535baf4eae 371 SUPERFAMILY SSF53633 9 260 5.24E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C4901_05135 c3b541db18070032c18d3c535baf4eae 371 ProSitePatterns PS00902 Glutamate 5-kinase signature. 210 227 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 Pfam PF01472 PUA domain 280 354 5.3E-20 T 14-10-2018 IPR002478 PUA domain GO:0003723 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 PRINTS PR00474 Glutamate 5-kinase family signature 46 60 2.3E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 PRINTS PR00474 Glutamate 5-kinase family signature 152 179 2.3E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 PRINTS PR00474 Glutamate 5-kinase family signature 212 232 2.3E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 PRINTS PR00474 Glutamate 5-kinase family signature 120 141 2.3E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 PRINTS PR00474 Glutamate 5-kinase family signature 80 108 2.3E-50 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 SMART SM00359 280 363 3.5E-12 T 14-10-2018 IPR002478 PUA domain GO:0003723 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 Gene3D G3DSA:3.40.1160.10 1 268 9.8E-92 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C4901_05135 c3b541db18070032c18d3c535baf4eae 371 Pfam PF00696 Amino acid kinase family 10 237 1.7E-43 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 Gene3D G3DSA:2.30.130.10 269 371 5.0E-33 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 Hamap MF_00456 Glutamate 5-kinase [proB]. 9 262 36.69 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C4901_05135 c3b541db18070032c18d3c535baf4eae 371 PIRSF PIRSF000729 5 371 2.0E-131 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 C4901_17050 a9758378bd99cdec383fcff6ead86d36 220 SUPERFAMILY SSF53335 19 217 1.3E-35 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_17050 a9758378bd99cdec383fcff6ead86d36 220 Pfam PF02527 rRNA small subunit methyltransferase G 36 214 2.8E-50 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C4901_17050 a9758378bd99cdec383fcff6ead86d36 220 Gene3D G3DSA:3.40.50.150 9 220 3.5E-62 T 14-10-2018 C4901_17050 a9758378bd99cdec383fcff6ead86d36 220 PIRSF PIRSF003078 14 220 3.0E-51 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C4901_17050 a9758378bd99cdec383fcff6ead86d36 220 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 39 216 4.2E-49 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C4901_17050 a9758378bd99cdec383fcff6ead86d36 220 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 27 215 26.504 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 C4901_10425 62d033bf9d08cee83b503a60bde52728 240 SUPERFAMILY SSF53633 3 233 3.67E-62 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C4901_10425 62d033bf9d08cee83b503a60bde52728 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 4 234 6.2E-83 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 C4901_10425 62d033bf9d08cee83b503a60bde52728 240 Gene3D G3DSA:3.40.1160.10 1 238 6.5E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C4901_10425 62d033bf9d08cee83b503a60bde52728 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 2 234 40.359 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 C4901_10425 62d033bf9d08cee83b503a60bde52728 240 Pfam PF00696 Amino acid kinase family 6 213 6.6E-26 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C4901_10425 62d033bf9d08cee83b503a60bde52728 240 PIRSF PIRSF005650 1 239 8.8E-80 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 C4901_07130 c144e9b9a4045732dd1cc0ad43ba45cc 88 SUPERFAMILY SSF47598 2 44 1.02E-8 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_07130 c144e9b9a4045732dd1cc0ad43ba45cc 88 TIGRFAM TIGR02606 antidote_CC2985: putative addiction module antidote protein, CC2985 family 3 72 1.9E-28 T 14-10-2018 IPR022789 Antitoxin ParD C4901_07130 c144e9b9a4045732dd1cc0ad43ba45cc 88 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 3 69 3.1E-22 T 14-10-2018 IPR022789 Antitoxin ParD C4901_07130 c144e9b9a4045732dd1cc0ad43ba45cc 88 Gene3D G3DSA:1.10.8.1250 8 87 6.9E-24 T 14-10-2018 IPR038296 Antitoxin ParD superfamily C4901_05465 0cf7db8eceda839b7986e63fb03af7bc 216 SUPERFAMILY SSF52833 1 89 3.65E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_05465 0cf7db8eceda839b7986e63fb03af7bc 216 Gene3D G3DSA:1.20.1050.10 81 198 3.7E-58 T 14-10-2018 C4901_05465 0cf7db8eceda839b7986e63fb03af7bc 216 SUPERFAMILY SSF47616 77 206 2.65E-22 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C4901_05465 0cf7db8eceda839b7986e63fb03af7bc 216 Pfam PF00043 Glutathione S-transferase, C-terminal domain 144 199 7.8E-8 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C4901_05465 0cf7db8eceda839b7986e63fb03af7bc 216 Gene3D G3DSA:3.40.30.10 9 200 3.7E-58 T 14-10-2018 C4901_05465 0cf7db8eceda839b7986e63fb03af7bc 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 9 80 1.4E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_05370 28a594260624f01fffe4e9e11766f116 212 TIGRFAM TIGR03481 HpnM: hopanoid biosynthesis associated membrane protein HpnM 15 206 1.0E-61 T 14-10-2018 IPR017842 Hopanoid biosynthesis-associated membrane protein HpnM C4901_05370 28a594260624f01fffe4e9e11766f116 212 PIRSF PIRSF004649 7 209 6.0E-40 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC C4901_05370 28a594260624f01fffe4e9e11766f116 212 Gene3D G3DSA:3.10.450.50 46 173 1.3E-29 T 14-10-2018 C4901_05370 28a594260624f01fffe4e9e11766f116 212 Gene3D G3DSA:1.10.10.640 75 198 1.3E-29 T 14-10-2018 C4901_05370 28a594260624f01fffe4e9e11766f116 212 Pfam PF05494 MlaC protein 43 199 2.1E-38 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 1 383 67.116 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 1 373 2.1E-136 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 207 244 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 PIRSF PIRSF000521 2 113 7.7E-10 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 PIRSF PIRSF000521 156 383 1.9E-30 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 PIRSF PIRSF000521 103 143 0.023 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 Pfam PF00202 Aminotransferase class-III 7 380 1.7E-108 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 Gene3D G3DSA:3.90.1150.10 8 370 2.5E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 Gene3D G3DSA:3.40.640.10 43 289 2.5E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_03835 da9c3b8a6a9fcd9648fe8051555478ee 386 SUPERFAMILY SSF53383 2 382 1.07E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 SUPERFAMILY SSF55811 24 146 4.87E-33 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 Pfam PF02581 Thiamine monophosphate synthase 151 326 3.7E-30 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 Pfam PF00293 NUDIX domain 25 145 3.5E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 Gene3D G3DSA:3.90.79.10 25 146 7.2E-32 T 14-10-2018 C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 SUPERFAMILY SSF51391 135 330 1.2E-36 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 PRINTS PR00502 NUDIX hydrolase family signature 54 68 3.9E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 PRINTS PR00502 NUDIX hydrolase family signature 68 83 3.9E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C4901_03460 f95f28194f6b5ea906a3e6ef86aec507 336 Gene3D G3DSA:3.20.20.70 147 332 5.1E-38 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_11915 4016497efb4c97f662bd90233398716e 169 SMART SM01058 5 116 3.0E-6 T 14-10-2018 IPR003711 CarD-like/TRCF domain C4901_11915 4016497efb4c97f662bd90233398716e 169 SUPERFAMILY SSF141259 4 70 3.4E-6 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily C4901_11915 4016497efb4c97f662bd90233398716e 169 Gene3D G3DSA:2.30.30.840 1 66 2.0E-17 T 14-10-2018 C4901_11915 4016497efb4c97f662bd90233398716e 169 Gene3D G3DSA:1.20.58.1290 67 162 4.2E-17 T 14-10-2018 C4901_11915 4016497efb4c97f662bd90233398716e 169 Pfam PF02559 CarD-like/TRCF domain 6 95 2.6E-7 T 14-10-2018 IPR003711 CarD-like/TRCF domain C4901_03680 274c3f286f2d8bf13d1edfd4a1a989b2 74 Pfam PF01402 Ribbon-helix-helix protein, copG family 4 39 8.3E-5 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 C4901_03680 274c3f286f2d8bf13d1edfd4a1a989b2 74 SUPERFAMILY SSF47598 1 46 1.11E-6 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_02635 38017cf091e8495e32c47d93e87300ed 154 Gene3D G3DSA:1.25.10.10 18 153 3.4E-15 T 14-10-2018 IPR011989 Armadillo-like helical C4901_02635 38017cf091e8495e32c47d93e87300ed 154 SUPERFAMILY SSF48371 43 140 1.73E-9 T 14-10-2018 IPR016024 Armadillo-type fold C4901_06165 0d57ea89163b7f4e958faa563918be08 290 PIRSF PIRSF000103 1 290 3.0E-65 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 C4901_06165 0d57ea89163b7f4e958faa563918be08 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 281 6.6E-16 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 C4901_06165 0d57ea89163b7f4e958faa563918be08 290 SUPERFAMILY SSF48179 164 282 1.47E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_06165 0d57ea89163b7f4e958faa563918be08 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 155 3.8E-28 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 C4901_06165 0d57ea89163b7f4e958faa563918be08 290 Gene3D G3DSA:1.10.1040.10 157 289 1.1E-30 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C4901_06165 0d57ea89163b7f4e958faa563918be08 290 SUPERFAMILY SSF51735 1 159 3.66E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_06165 0d57ea89163b7f4e958faa563918be08 290 Gene3D G3DSA:3.40.50.720 1 155 1.3E-38 T 14-10-2018 C4901_04950 eba2fcdf8964910b965896851151605d 295 Gene3D G3DSA:2.30.30.830 94 160 4.1E-7 T 14-10-2018 C4901_04950 eba2fcdf8964910b965896851151605d 295 Pfam PF11356 Type II secretion system protein C 37 159 2.3E-19 T 14-10-2018 IPR024961 Type II secretion system protein C, N-terminal C4901_04950 eba2fcdf8964910b965896851151605d 295 Pfam PF13180 PDZ domain 233 288 2.8E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_04950 eba2fcdf8964910b965896851151605d 295 SUPERFAMILY SSF50156 219 291 4.21E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_04950 eba2fcdf8964910b965896851151605d 295 Gene3D G3DSA:2.30.42.10 210 293 1.5E-10 T 14-10-2018 C4901_02570 18ddb0ba9d54e8ae2d58d8c03b413d97 106 Gene3D G3DSA:3.30.70.120 1 104 4.3E-28 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C4901_02570 18ddb0ba9d54e8ae2d58d8c03b413d97 106 SUPERFAMILY SSF54913 5 100 8.89E-25 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C4901_02570 18ddb0ba9d54e8ae2d58d8c03b413d97 106 Pfam PF02641 Uncharacterized ACR, COG1993 6 98 8.1E-26 T 14-10-2018 IPR003793 Domain of unknown function DUF190 C4901_04315 4f76a664e418e0b60b1b5fa3f653ad0a 81 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 9 69 16.149 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C4901_04315 4f76a664e418e0b60b1b5fa3f653ad0a 81 SUPERFAMILY SSF116842 5 69 1.57E-20 T 14-10-2018 C4901_04315 4f76a664e418e0b60b1b5fa3f653ad0a 81 Pfam PF02609 Exonuclease VII small subunit 10 60 1.4E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C4901_04315 4f76a664e418e0b60b1b5fa3f653ad0a 81 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 9 49 2.0E-7 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C4901_04315 4f76a664e418e0b60b1b5fa3f653ad0a 81 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 64 1.1E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 C4901_04315 4f76a664e418e0b60b1b5fa3f653ad0a 81 Gene3D G3DSA:1.10.287.1040 4 80 3.8E-24 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 C4901_08670 3ae5edb7185520195c253a96e86b57c6 289 PIRSF PIRSF005651 1 289 2.2E-64 T 14-10-2018 IPR010200 HflC GO:0016021|GO:0052547 C4901_08670 3ae5edb7185520195c253a96e86b57c6 289 Gene3D G3DSA:3.30.479.30 51 184 1.1E-13 T 14-10-2018 C4901_08670 3ae5edb7185520195c253a96e86b57c6 289 SUPERFAMILY SSF117892 54 186 1.2E-19 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily C4901_08670 3ae5edb7185520195c253a96e86b57c6 289 SMART SM00244 22 182 4.5E-22 T 14-10-2018 IPR001107 Band 7 domain C4901_08670 3ae5edb7185520195c253a96e86b57c6 289 Pfam PF01145 SPFH domain / Band 7 family 26 198 2.0E-22 T 14-10-2018 IPR001107 Band 7 domain C4901_16010 3cd660e2a693ac77e288ef310cb8ca97 272 SUPERFAMILY SSF53223 2 100 6.33E-26 T 14-10-2018 C4901_16010 3cd660e2a693ac77e288ef310cb8ca97 272 SUPERFAMILY SSF51735 101 267 1.64E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_16010 3cd660e2a693ac77e288ef310cb8ca97 272 Gene3D G3DSA:3.40.50.10860 5 253 7.4E-72 T 14-10-2018 C4901_16010 3cd660e2a693ac77e288ef310cb8ca97 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 268 1.2E-67 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C4901_16010 3cd660e2a693ac77e288ef310cb8ca97 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 116 190 1.9E-9 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase C4901_16010 3cd660e2a693ac77e288ef310cb8ca97 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 268 30.393 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C4901_16010 3cd660e2a693ac77e288ef310cb8ca97 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 5.1E-19 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 C4901_16010 3cd660e2a693ac77e288ef310cb8ca97 272 Gene3D G3DSA:3.40.50.720 115 235 7.4E-72 T 14-10-2018 C4901_00975 ea9a626a782157cd76eedd870e7fbb7a 115 Gene3D G3DSA:3.30.70.20 2 99 1.6E-29 T 14-10-2018 C4901_00975 ea9a626a782157cd76eedd870e7fbb7a 115 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.7E-13 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C4901_00975 ea9a626a782157cd76eedd870e7fbb7a 115 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.7E-13 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C4901_00975 ea9a626a782157cd76eedd870e7fbb7a 115 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.7E-13 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 C4901_00975 ea9a626a782157cd76eedd870e7fbb7a 115 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_00975 ea9a626a782157cd76eedd870e7fbb7a 115 SUPERFAMILY SSF54862 3 97 2.55E-22 T 14-10-2018 C4901_00975 ea9a626a782157cd76eedd870e7fbb7a 115 Pfam PF11953 Domain of unknown function (DUF3470) 66 105 7.3E-19 T 14-10-2018 IPR022569 Ferredoxin, C-terminal C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 Gene3D G3DSA:4.10.950.10 196 274 6.0E-36 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 Gene3D G3DSA:2.30.30.30 115 195 3.6E-30 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 45.45 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 SMART SM01383 42 118 3.4E-40 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.8E-30 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 Gene3D G3DSA:2.40.50.140 1 114 2.1E-40 T 14-10-2018 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 273 4.4E-122 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 SMART SM01382 124 252 9.3E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 SUPERFAMILY SSF50104 127 272 6.62E-59 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 6.1E-56 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 PIRSF PIRSF002158 13 275 2.4E-96 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14110 50dbd78bd1c598dd455f46e76f4da051 275 SUPERFAMILY SSF50249 3 124 3.19E-43 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_09760 43984c57c9003ee56828daef8e4d3d52 397 SMART SM00382 166 315 6.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_09760 43984c57c9003ee56828daef8e4d3d52 397 Gene3D G3DSA:3.40.50.300 134 308 1.1E-31 T 14-10-2018 C4901_09760 43984c57c9003ee56828daef8e4d3d52 397 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 170 306 1.9E-16 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_09760 43984c57c9003ee56828daef8e4d3d52 397 SUPERFAMILY SSF52540 146 392 1.37E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08270 6a222051120d797a3a2f81ce2be4ec67 411 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 297 316 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 C4901_08270 6a222051120d797a3a2f81ce2be4ec67 411 Gene3D G3DSA:3.40.718.10 2 411 9.1E-170 T 14-10-2018 C4901_08270 6a222051120d797a3a2f81ce2be4ec67 411 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 7 410 8.1E-199 T 14-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 C4901_08270 6a222051120d797a3a2f81ce2be4ec67 411 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 28 406 2.8E-111 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C4901_08270 6a222051120d797a3a2f81ce2be4ec67 411 SMART SM01329 27 406 3.9E-177 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 C4901_08270 6a222051120d797a3a2f81ce2be4ec67 411 SUPERFAMILY SSF53659 14 410 9.54E-138 T 14-10-2018 C4901_05165 9a12f68335e127330f72868368d1bad6 159 Pfam PF01252 Signal peptidase (SPase) II 7 146 8.3E-37 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C4901_05165 9a12f68335e127330f72868368d1bad6 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 128 144 1.3E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C4901_05165 9a12f68335e127330f72868368d1bad6 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 92 107 1.3E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C4901_05165 9a12f68335e127330f72868368d1bad6 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 1.3E-17 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C4901_05165 9a12f68335e127330f72868368d1bad6 159 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 153 16.476 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C4901_05165 9a12f68335e127330f72868368d1bad6 159 TIGRFAM TIGR00077 lspA: signal peptidase II 4 151 7.7E-37 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 C4901_09685 7eb3bbbc439f240377868ab61a0e50a9 231 Gene3D G3DSA:3.30.70.20 1 231 9.3E-68 T 14-10-2018 C4901_09685 7eb3bbbc439f240377868ab61a0e50a9 231 Pfam PF00037 4Fe-4S binding domain 6 22 1.5E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_09685 7eb3bbbc439f240377868ab61a0e50a9 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 105 116 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_09685 7eb3bbbc439f240377868ab61a0e50a9 231 SUPERFAMILY SSF54862 1 203 5.13E-69 T 14-10-2018 C4901_09685 7eb3bbbc439f240377868ab61a0e50a9 231 Pfam PF13247 4Fe-4S dicluster domain 67 166 1.1E-23 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 PIRSF PIRSF001619 2 314 1.5E-126 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 Hamap MF_01694 Biotin synthase [bioB]. 4 309 41.55 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 216 307 3.0E-18 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 SMART SM00876 216 308 2.2E-41 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 SUPERFAMILY SSF102114 7 307 6.28E-88 T 14-10-2018 C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 Pfam PF04055 Radical SAM superfamily 46 199 2.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 SMART SM00729 39 251 1.7E-39 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 Gene3D G3DSA:3.20.20.70 2 310 3.4E-122 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_01100 f4a5debbb5f9c78e3c540d2616f9b618 336 TIGRFAM TIGR00433 bioB: biotin synthase 12 307 1.6E-120 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 C4901_14905 f653ae469c0f4110e426a150aa9d0ab8 76 Pfam PF01206 Sulfurtransferase TusA 6 74 1.3E-22 T 14-10-2018 IPR001455 TusA-like domain C4901_14905 f653ae469c0f4110e426a150aa9d0ab8 76 Gene3D G3DSA:3.30.110.40 1 76 7.7E-27 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_14905 f653ae469c0f4110e426a150aa9d0ab8 76 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 14-10-2018 IPR001455 TusA-like domain C4901_14905 f653ae469c0f4110e426a150aa9d0ab8 76 SUPERFAMILY SSF64307 5 74 2.35E-22 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_15445 ab27d8116ee0e01e44da07d2adb1c36b 120 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 16 103 3.9E-24 T 14-10-2018 IPR009241 Toxin HigB-like C4901_02735 34e7e4199204b48d1d4cb7c1000035a7 502 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 64 445 1.1E-81 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 C4901_02735 34e7e4199204b48d1d4cb7c1000035a7 502 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 11 482 20.653 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 C4901_02735 34e7e4199204b48d1d4cb7c1000035a7 502 Gene3D G3DSA:3.60.110.10 231 464 9.6E-19 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C4901_02735 34e7e4199204b48d1d4cb7c1000035a7 502 Pfam PF00795 Carbon-nitrogen hydrolase 232 462 2.5E-21 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C4901_02735 34e7e4199204b48d1d4cb7c1000035a7 502 SUPERFAMILY SSF56317 218 475 2.49E-34 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 Gene3D G3DSA:3.90.190.20 310 446 1.7E-41 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 386 7.6E-14 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 Gene3D G3DSA:3.40.1190.10 80 308 3.0E-73 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 27 443 9.7E-131 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 Gene3D G3DSA:3.40.1390.10 1 79 6.9E-23 T 14-10-2018 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 SUPERFAMILY SSF63418 1 96 2.88E-24 T 14-10-2018 IPR035911 MurE/MurF, N-terminal C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 Pfam PF01225 Mur ligase family, catalytic domain 21 93 7.2E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 2 444 33.259 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 Pfam PF08245 Mur ligase middle domain 104 291 2.8E-44 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 SUPERFAMILY SSF53623 99 307 2.75E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_03380 b93a1c0899896b9a461845aa45c0854b 446 SUPERFAMILY SSF53244 311 443 5.72E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_01900 e8605adb127c251b7a23533674223df1 324 SMART SM00382 114 321 3.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01900 e8605adb127c251b7a23533674223df1 324 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 48 314 2.6E-96 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 C4901_01900 e8605adb127c251b7a23533674223df1 324 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 45 316 55.172 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 C4901_01900 e8605adb127c251b7a23533674223df1 324 Gene3D G3DSA:1.20.120.140 18 313 5.1E-103 T 14-10-2018 C4901_01900 e8605adb127c251b7a23533674223df1 324 SUPERFAMILY SSF52540 113 314 1.27E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01900 e8605adb127c251b7a23533674223df1 324 SMART SM00963 21 102 2.8E-15 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_01900 e8605adb127c251b7a23533674223df1 324 Pfam PF00448 SRP54-type protein, GTPase domain 116 315 1.7E-71 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_01900 e8605adb127c251b7a23533674223df1 324 Pfam PF02881 SRP54-type protein, helical bundle domain 34 96 1.4E-9 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_01900 e8605adb127c251b7a23533674223df1 324 SUPERFAMILY SSF47364 16 95 1.44E-15 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 C4901_01900 e8605adb127c251b7a23533674223df1 324 SMART SM00962 115 316 2.4E-98 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_01900 e8605adb127c251b7a23533674223df1 324 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 289 302 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 C4901_01900 e8605adb127c251b7a23533674223df1 324 Gene3D G3DSA:3.40.50.300 115 304 5.1E-103 T 14-10-2018 C4901_10930 868237e8d576824e98bca4753ef50fa5 346 Gene3D G3DSA:3.20.20.100 1 346 1.2E-115 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C4901_10930 868237e8d576824e98bca4753ef50fa5 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 5.8E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_10930 868237e8d576824e98bca4753ef50fa5 346 PRINTS PR00069 Aldo-keto reductase signature 115 133 5.8E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_10930 868237e8d576824e98bca4753ef50fa5 346 SUPERFAMILY SSF51430 1 344 2.23E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C4901_10930 868237e8d576824e98bca4753ef50fa5 346 Pfam PF00248 Aldo/keto reductase family 16 337 6.9E-66 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 Gene3D G3DSA:1.20.950.20 1 211 1.2E-68 T 14-10-2018 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 SUPERFAMILY SSF81342 8 224 1.33E-37 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 TIGRFAM TIGR02125 CytB-hydogenase: Ni/Fe-hydrogenase, b-type cytochrome subunit 12 225 7.1E-63 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 Pfam PF01292 Prokaryotic cytochrome b561 14 221 3.3E-29 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 16 39 2.6E-41 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 54 78 2.6E-41 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 213 226 2.6E-41 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 134 153 2.6E-41 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 PRINTS PR00161 Nickel-dependent hydrogenase/B-type cytochrome signature 182 204 2.6E-41 T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C4901_12250 d23a0e33b182c55f99ce566d3931427c 232 ProSitePatterns PS00883 Nickel-dependent hydrogenases b-type cytochrome subunit signature 2. 182 199 - T 14-10-2018 IPR000516 Nickel-dependent hydrogenase b-type cytochrome subunit GO:0005506|GO:0009055|GO:0016021 C4901_10575 51275e0786387ec9696526644d399a57 303 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 22 296 1.2E-34 T 14-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF C4901_10575 51275e0786387ec9696526644d399a57 303 SUPERFAMILY SSF47240 45 230 1.37E-7 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_02950 d21f3caf89fcab6936a265e69905f0c9 89 SUPERFAMILY SSF89447 1 39 1.12E-5 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_02950 d21f3caf89fcab6936a265e69905f0c9 89 SMART SM00966 4 50 3.0E-5 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_02950 d21f3caf89fcab6936a265e69905f0c9 89 Gene3D G3DSA:2.10.260.10 3 43 1.8E-5 T 14-10-2018 C4901_01975 a654cdccebbbcfffabf9457a18cd6634 134 SUPERFAMILY SSF88723 2 128 1.82E-16 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_01975 a654cdccebbbcfffabf9457a18cd6634 134 Gene3D G3DSA:3.40.50.1010 1 131 3.1E-30 T 14-10-2018 C4901_01975 a654cdccebbbcfffabf9457a18cd6634 134 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 128 11.117 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_01975 a654cdccebbbcfffabf9457a18cd6634 134 Pfam PF01850 PIN domain 2 122 2.9E-11 T 14-10-2018 IPR002716 PIN domain C4901_01805 936851c2e95378db3a929491e67dc810 400 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 34 392 1.3E-130 T 14-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 C4901_01805 936851c2e95378db3a929491e67dc810 400 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 17 396 45.494 T 14-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 C4901_01805 936851c2e95378db3a929491e67dc810 400 Gene3D G3DSA:3.40.640.10 69 301 1.6E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_01805 936851c2e95378db3a929491e67dc810 400 Gene3D G3DSA:3.90.1150.10 48 392 1.6E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_01805 936851c2e95378db3a929491e67dc810 400 Pfam PF00155 Aminotransferase class I and II 55 392 1.1E-52 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C4901_01805 936851c2e95378db3a929491e67dc810 400 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 247 256 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 C4901_01805 936851c2e95378db3a929491e67dc810 400 SUPERFAMILY SSF53383 23 394 6.95E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_11795 dc06396217f6b605730c0a8e3a3316c2 427 Pfam PF00534 Glycosyl transferases group 1 245 400 2.6E-35 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_11795 dc06396217f6b605730c0a8e3a3316c2 427 Gene3D G3DSA:3.40.50.2000 85 420 5.0E-64 T 14-10-2018 C4901_11795 dc06396217f6b605730c0a8e3a3316c2 427 Pfam PF13439 Glycosyltransferase Family 4 71 228 1.6E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C4901_11795 dc06396217f6b605730c0a8e3a3316c2 427 SUPERFAMILY SSF53756 63 424 5.1E-72 T 14-10-2018 C4901_11795 dc06396217f6b605730c0a8e3a3316c2 427 Gene3D G3DSA:3.40.50.2000 227 407 5.0E-64 T 14-10-2018 C4901_10095 1706ae9434d5148d0aaf15562abbea9f 81 SUPERFAMILY SSF159133 1 80 4.84E-22 T 14-10-2018 IPR036677 EutN/Ccml superfamily C4901_10095 1706ae9434d5148d0aaf15562abbea9f 81 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 80 5.0E-22 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml C4901_10095 1706ae9434d5148d0aaf15562abbea9f 81 Gene3D G3DSA:2.40.50.220 1 81 1.1E-25 T 14-10-2018 IPR036677 EutN/Ccml superfamily C4901_10095 1706ae9434d5148d0aaf15562abbea9f 81 TIGRFAM TIGR02704 carboxysome_B: carboxysome peptide B 1 80 3.3E-42 T 14-10-2018 IPR014077 Carboxysome peptide B C4901_10095 1706ae9434d5148d0aaf15562abbea9f 81 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 77 2.4E-17 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml C4901_09640 45a8e320b5677f14f6d75850b8df769a 67 Pfam PF11127 Protein of unknown function (DUF2892) 2 60 1.3E-14 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 C4901_03860 c09e3527903852379e3187e251bdd01f 406 Gene3D G3DSA:1.20.5.470 378 406 3.2E-8 T 14-10-2018 C4901_03860 c09e3527903852379e3187e251bdd01f 406 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_03860 c09e3527903852379e3187e251bdd01f 406 Gene3D G3DSA:3.40.50.620 7 176 1.9E-156 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_03860 c09e3527903852379e3187e251bdd01f 406 SUPERFAMILY SSF69864 177 401 8.11E-90 T 14-10-2018 C4901_03860 c09e3527903852379e3187e251bdd01f 406 Pfam PF00764 Arginosuccinate synthase 8 397 3.1E-151 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_03860 c09e3527903852379e3187e251bdd01f 406 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 399 5.7E-138 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_03860 c09e3527903852379e3187e251bdd01f 406 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 403 51.32 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_03860 c09e3527903852379e3187e251bdd01f 406 SUPERFAMILY SSF52402 6 209 3.09E-49 T 14-10-2018 C4901_03860 c09e3527903852379e3187e251bdd01f 406 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 118 129 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_03860 c09e3527903852379e3187e251bdd01f 406 Gene3D G3DSA:3.90.1260.10 65 357 1.9E-156 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 C4901_09215 22d2a2ed2ce67e8b3c83c9ab9dba3b6e 434 Gene3D G3DSA:3.90.220.20 13 420 1.6E-59 T 14-10-2018 C4901_09215 22d2a2ed2ce67e8b3c83c9ab9dba3b6e 434 Gene3D G3DSA:3.90.220.20 183 402 1.6E-59 T 14-10-2018 C4901_09215 22d2a2ed2ce67e8b3c83c9ab9dba3b6e 434 Pfam PF01420 Type I restriction modification DNA specificity domain 226 405 1.5E-10 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 C4901_09215 22d2a2ed2ce67e8b3c83c9ab9dba3b6e 434 SUPERFAMILY SSF116734 223 429 2.45E-31 T 14-10-2018 C4901_09215 22d2a2ed2ce67e8b3c83c9ab9dba3b6e 434 SUPERFAMILY SSF116734 13 208 8.01E-17 T 14-10-2018 C4901_13990 edd82d64b927120d12c74d8c6360203b 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 85 328 3.3E-34 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_13990 edd82d64b927120d12c74d8c6360203b 358 Gene3D G3DSA:3.40.50.2000 4 164 1.2E-29 T 14-10-2018 C4901_13990 edd82d64b927120d12c74d8c6360203b 358 Gene3D G3DSA:3.40.50.2000 182 349 8.3E-41 T 14-10-2018 C4901_13990 edd82d64b927120d12c74d8c6360203b 358 SUPERFAMILY SSF53756 9 346 1.88E-78 T 14-10-2018 C4901_08970 8747d04943cbdc699d609c6ebe8cd851 203 PIRSF PIRSF004682 2 189 1.1E-54 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 C4901_08970 8747d04943cbdc699d609c6ebe8cd851 203 Pfam PF13242 HAD-hyrolase-like 110 181 1.3E-11 T 14-10-2018 C4901_08970 8747d04943cbdc699d609c6ebe8cd851 203 SUPERFAMILY SSF56784 7 185 3.2E-48 T 14-10-2018 IPR036412 HAD-like superfamily C4901_08970 8747d04943cbdc699d609c6ebe8cd851 203 Gene3D G3DSA:3.40.50.1000 4 185 9.9E-54 T 14-10-2018 IPR023214 HAD superfamily C4901_08970 8747d04943cbdc699d609c6ebe8cd851 203 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 8 156 1.1E-32 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 C4901_08970 8747d04943cbdc699d609c6ebe8cd851 203 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 8 156 1.5E-35 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 C4901_12995 38e708df0b2d5f8f8605cf73d16ae7e3 113 Pfam PF00581 Rhodanese-like domain 11 100 1.5E-16 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_12995 38e708df0b2d5f8f8605cf73d16ae7e3 113 SMART SM00450 9 104 1.0E-26 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_12995 38e708df0b2d5f8f8605cf73d16ae7e3 113 SUPERFAMILY SSF52821 4 106 1.44E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_12995 38e708df0b2d5f8f8605cf73d16ae7e3 113 Gene3D G3DSA:3.40.250.10 8 111 6.9E-34 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 Gene3D G3DSA:2.40.10.120 54 276 5.5E-75 T 14-10-2018 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 Pfam PF13180 PDZ domain 283 371 5.3E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 SMART SM00228 282 365 3.2E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 1.9E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 PRINTS PR00834 HtrA/DegQ protease family signature 139 159 1.9E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 PRINTS PR00834 HtrA/DegQ protease family signature 118 130 1.9E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 PRINTS PR00834 HtrA/DegQ protease family signature 214 231 1.9E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 PRINTS PR00834 HtrA/DegQ protease family signature 323 335 1.9E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 PRINTS PR00834 HtrA/DegQ protease family signature 179 203 1.9E-51 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 Pfam PF13365 Trypsin-like peptidase domain 109 243 2.4E-31 T 14-10-2018 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 SUPERFAMILY SSF50156 240 365 2.76E-23 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 Gene3D G3DSA:2.30.42.10 277 378 1.1E-27 T 14-10-2018 C4901_03215 c6e55bedc4e2fab7d5a727d5b62e5649 394 SUPERFAMILY SSF50494 54 279 5.91E-60 T 14-10-2018 IPR009003 Peptidase S1, PA clan C4901_05540 7ad3ea02fdc7bec17941c3d8fcb09653 403 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 235 248 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 C4901_05540 7ad3ea02fdc7bec17941c3d8fcb09653 403 Pfam PF00155 Aminotransferase class I and II 31 386 1.0E-70 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C4901_05540 7ad3ea02fdc7bec17941c3d8fcb09653 403 Gene3D G3DSA:3.40.640.10 62 285 1.8E-130 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_05540 7ad3ea02fdc7bec17941c3d8fcb09653 403 SUPERFAMILY SSF53383 3 390 8.87E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_05540 7ad3ea02fdc7bec17941c3d8fcb09653 403 Gene3D G3DSA:3.90.1150.10 25 386 1.8E-130 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_08225 7141265d48360e2bb7f84efba1423378 710 SUPERFAMILY SSF56024 247 410 2.47E-22 T 14-10-2018 C4901_08225 7141265d48360e2bb7f84efba1423378 710 Pfam PF13091 PLD-like domain 256 383 3.9E-10 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 C4901_08225 7141265d48360e2bb7f84efba1423378 710 SMART SM00155 126 153 4.1 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C4901_08225 7141265d48360e2bb7f84efba1423378 710 SMART SM00155 343 370 6.1E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C4901_08225 7141265d48360e2bb7f84efba1423378 710 Gene3D G3DSA:3.30.870.10 7 224 1.1E-23 T 14-10-2018 C4901_08225 7141265d48360e2bb7f84efba1423378 710 Pfam PF00614 Phospholipase D Active site motif 128 150 7.1E-7 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 C4901_08225 7141265d48360e2bb7f84efba1423378 710 SUPERFAMILY SSF56024 7 220 1.41E-25 T 14-10-2018 C4901_08225 7141265d48360e2bb7f84efba1423378 710 Gene3D G3DSA:3.30.870.10 245 400 2.6E-16 T 14-10-2018 C4901_08225 7141265d48360e2bb7f84efba1423378 710 Pfam PF09335 SNARE associated Golgi protein 544 658 3.1E-16 T 14-10-2018 IPR032816 SNARE associated Golgi protein C4901_00440 02826b8b19292ccd757243ddc79a8f6a 178 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 178 69.914 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 C4901_00440 02826b8b19292ccd757243ddc79a8f6a 178 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 2 173 2.2E-47 T 14-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 C4901_00440 02826b8b19292ccd757243ddc79a8f6a 178 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 3 171 5.0E-34 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal C4901_00440 02826b8b19292ccd757243ddc79a8f6a 178 Gene3D G3DSA:3.40.225.10 1 176 4.6E-43 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily C4901_00440 02826b8b19292ccd757243ddc79a8f6a 178 SUPERFAMILY SSF53639 2 171 7.26E-37 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily C4901_00440 02826b8b19292ccd757243ddc79a8f6a 178 SMART SM01007 1 175 8.2E-27 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal C4901_05525 6728192bd8552a914399823e4bbc3bb2 148 Gene3D G3DSA:3.10.450.530 52 142 3.6E-11 T 14-10-2018 IPR038573 Ribonuclease toxin BrnT superfamily C4901_05525 6728192bd8552a914399823e4bbc3bb2 148 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 64 140 3.3E-18 T 14-10-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 3 171 28.242 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 9 76 4.2E-28 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 Gene3D G3DSA:3.10.20.80 4 77 1.4E-28 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 ProSitePatterns PS00938 Initiation factor 3 signature. 60 73 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 SUPERFAMILY SSF55200 85 171 8.5E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 85 170 5.9E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 SUPERFAMILY SSF54364 7 80 4.84E-26 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 Gene3D G3DSA:3.30.110.10 78 171 3.9E-37 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 C4901_05570 608a4e2fadeca509f6f4a946863c8ca7 171 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 9 171 5.9E-65 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 SUPERFAMILY SSF46785 4 111 2.0E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 SUPERFAMILY SSF53850 86 297 6.25E-50 T 14-10-2018 C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 Gene3D G3DSA:1.10.10.10 1 90 3.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 Gene3D G3DSA:3.40.190.290 91 303 1.7E-48 T 14-10-2018 C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.8E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 Pfam PF03466 LysR substrate binding domain 88 295 1.3E-51 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_12830 14e0c2608e5237541302a0cb85673a1f 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.7E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SUPERFAMILY SSF50998 32 222 2.35E-8 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SMART SM00564 376 408 20.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SMART SM00564 421 452 150.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SMART SM00564 167 222 18.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SMART SM00564 231 262 1.1 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SMART SM00564 272 304 62.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SMART SM00564 323 361 44.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SMART SM00564 125 157 6.7 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 Gene3D G3DSA:2.140.10.10 374 488 1.3E-11 T 14-10-2018 C4901_10130 7112a669044d1567cbe7a6df71db501b 498 Gene3D G3DSA:2.40.10.480 125 192 4.7E-8 T 14-10-2018 C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SUPERFAMILY SSF50998 335 474 3.92E-18 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C4901_10130 7112a669044d1567cbe7a6df71db501b 498 Pfam PF13360 PQQ-like domain 271 479 8.2E-17 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 Pfam PF13570 PQQ-like domain 215 254 2.7E-5 T 14-10-2018 IPR025666 Pyrrolo-quinoline quinone-like domain C4901_10130 7112a669044d1567cbe7a6df71db501b 498 Gene3D G3DSA:2.130.10.10 193 373 3.2E-29 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_10130 7112a669044d1567cbe7a6df71db501b 498 Pfam PF01011 PQQ enzyme repeat 131 161 2.9E-5 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_10130 7112a669044d1567cbe7a6df71db501b 498 SUPERFAMILY SSF50998 201 362 5.81E-30 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C4901_14045 5fd6f77c5b977b2c4bbbfb5757ea75e9 117 Gene3D G3DSA:3.30.420.100 2 117 1.1E-38 T 14-10-2018 C4901_14045 5fd6f77c5b977b2c4bbbfb5757ea75e9 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 3 117 24.514 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14045 5fd6f77c5b977b2c4bbbfb5757ea75e9 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 3 117 2.3E-36 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14045 5fd6f77c5b977b2c4bbbfb5757ea75e9 117 SUPERFAMILY SSF53137 4 115 1.92E-46 T 14-10-2018 C4901_14045 5fd6f77c5b977b2c4bbbfb5757ea75e9 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 6 117 3.9E-34 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 SUPERFAMILY SSF55920 177 433 4.32E-86 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 Gene3D G3DSA:3.90.230.10 173 437 9.8E-101 T 14-10-2018 C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 Pfam PF05195 Aminopeptidase P, N-terminal domain 9 127 1.9E-33 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 254 270 7.7E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 232 245 7.7E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 PRINTS PR00599 Methionine aminopeptidase-1 signature 372 384 7.7E-5 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 349 361 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 Pfam PF00557 Metallopeptidase family M24 182 413 9.8E-65 T 14-10-2018 IPR000994 Peptidase M24 C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 Gene3D G3DSA:3.40.350.10 4 172 1.7E-53 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 SMART SM01011 4 137 6.5E-59 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 C4901_01645 58e330d5f41cfbfaf99864914c92ff83 438 SUPERFAMILY SSF53092 4 175 2.88E-51 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal C4901_08580 dcadc47562fa1532cbac8dec95d0667a 81 Gene3D G3DSA:3.40.190.10 50 68 1.9E-10 T 14-10-2018 C4901_08580 dcadc47562fa1532cbac8dec95d0667a 81 SUPERFAMILY SSF53850 6 76 3.26E-5 T 14-10-2018 C4901_08580 dcadc47562fa1532cbac8dec95d0667a 81 Gene3D G3DSA:3.40.190.10 3 49 1.9E-10 T 14-10-2018 C4901_02325 5a73e6cb2beccc097f09432fdb890e1f 180 PIRSF PIRSF039093 1 180 9.7E-90 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 C4901_02325 5a73e6cb2beccc097f09432fdb890e1f 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 177 1.5E-87 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 C4901_02325 5a73e6cb2beccc097f09432fdb890e1f 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 177 42.263 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 C4901_02325 5a73e6cb2beccc097f09432fdb890e1f 180 SUPERFAMILY SSF56235 3 175 3.46E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_02325 5a73e6cb2beccc097f09432fdb890e1f 180 Pfam PF00227 Proteasome subunit 5 174 5.1E-23 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 C4901_02325 5a73e6cb2beccc097f09432fdb890e1f 180 Gene3D G3DSA:3.60.20.10 2 178 1.2E-69 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 TIGRFAM TIGR00615 recR: recombination protein RecR 5 197 3.5E-70 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 Pfam PF02132 RecR protein 41 79 2.1E-15 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 Gene3D G3DSA:3.40.1360.10 78 199 1.8E-38 T 14-10-2018 C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 96.859 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 Pfam PF13662 Toprim domain 83 172 4.4E-21 T 14-10-2018 IPR006171 TOPRIM domain C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 SUPERFAMILY SSF111304 6 198 1.24E-70 T 14-10-2018 IPR023627 Recombination protein RecR C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 Gene3D G3DSA:1.10.8.420 4 53 2.1E-16 T 14-10-2018 C4901_10545 8b0ad0f6d1904a0ca21dc8a3190850da 199 SMART SM00493 81 166 4.5E-11 T 14-10-2018 IPR006171 TOPRIM domain C4901_12380 2f9e249187ed5a0fc8db609eca286d49 259 PIRSF PIRSF006157 1 259 1.1E-82 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 C4901_12380 2f9e249187ed5a0fc8db609eca286d49 259 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 23 233 3.3E-28 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 C4901_12380 2f9e249187ed5a0fc8db609eca286d49 259 Gene3D G3DSA:3.40.830.10 1 259 8.6E-82 T 14-10-2018 C4901_12380 2f9e249187ed5a0fc8db609eca286d49 259 SUPERFAMILY SSF53213 4 258 1.05E-84 T 14-10-2018 C4901_02260 65b72f8c1540f8e871277e52016f9379 76 SUPERFAMILY SSF47598 1 37 1.0E-4 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_03090 5aca4f68a73c9c96e66f1a68e7ee076e 257 Pfam PF02405 Permease MlaE 40 251 1.8E-72 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 C4901_03090 5aca4f68a73c9c96e66f1a68e7ee076e 257 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 35 256 6.3E-84 T 14-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria C4901_08050 2438ec3745b5f066fec391de5717572a 297 SUPERFAMILY SSF56349 9 288 1.65E-59 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_08050 2438ec3745b5f066fec391de5717572a 297 Gene3D G3DSA:1.10.150.130 5 98 2.4E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_08050 2438ec3745b5f066fec391de5717572a 297 Gene3D G3DSA:1.10.443.10 111 291 1.7E-68 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_08050 2438ec3745b5f066fec391de5717572a 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 90 2.5E-17 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 C4901_08050 2438ec3745b5f066fec391de5717572a 297 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 6 297 56.272 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 C4901_08050 2438ec3745b5f066fec391de5717572a 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 8 297 55.06 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD C4901_08050 2438ec3745b5f066fec391de5717572a 297 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 12 296 5.1E-109 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 C4901_08050 2438ec3745b5f066fec391de5717572a 297 Pfam PF00589 Phage integrase family 112 282 1.6E-50 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_09875 a0b3637083ec508008031f01cae36617 463 Gene3D G3DSA:2.20.200.10 95 346 2.2E-77 T 14-10-2018 C4901_09875 a0b3637083ec508008031f01cae36617 463 Pfam PF02321 Outer membrane efflux protein 281 458 1.7E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_09875 a0b3637083ec508008031f01cae36617 463 Pfam PF02321 Outer membrane efflux protein 59 242 5.8E-8 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_09875 a0b3637083ec508008031f01cae36617 463 Gene3D G3DSA:1.20.1600.10 50 457 2.2E-77 T 14-10-2018 C4901_09875 a0b3637083ec508008031f01cae36617 463 SUPERFAMILY SSF56954 2 458 7.46E-65 T 14-10-2018 C4901_09875 a0b3637083ec508008031f01cae36617 463 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 458 4.1E-75 T 14-10-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0016020|GO:0022857|GO:0055085 C4901_16045 8e8e74bbd07656cabe2dcbc4c22f9630 396 Gene3D G3DSA:3.30.565.60 221 376 1.9E-28 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily C4901_16045 8e8e74bbd07656cabe2dcbc4c22f9630 396 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 297 356 1.8E-13 T 14-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain C4901_16045 8e8e74bbd07656cabe2dcbc4c22f9630 396 Gene3D G3DSA:3.30.950.30 2 126 1.8E-18 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily C4901_16045 8e8e74bbd07656cabe2dcbc4c22f9630 396 Pfam PF04326 Putative DNA-binding domain 14 127 5.4E-18 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 C4901_12615 aa532dd40c1bf20c63132224174883b8 104 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 36 60 - T 14-10-2018 IPR001455 TusA-like domain C4901_12615 aa532dd40c1bf20c63132224174883b8 104 Gene3D G3DSA:3.30.110.40 32 103 2.4E-14 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_12615 aa532dd40c1bf20c63132224174883b8 104 Pfam PF01206 Sulfurtransferase TusA 35 103 1.9E-15 T 14-10-2018 IPR001455 TusA-like domain C4901_12615 aa532dd40c1bf20c63132224174883b8 104 SUPERFAMILY SSF64307 30 103 1.06E-16 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_13165 ced76a0e68c2652c9c2cd9218497d88f 173 Pfam PF05717 IS66 Orf2 like protein 38 132 5.6E-25 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 71 234 3.5E-60 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 70 630 1.8E-258 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 SUPERFAMILY SSF52467 253 426 5.01E-62 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 SUPERFAMILY SSF52518 437 633 1.43E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 459 607 4.1E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 Gene3D G3DSA:3.40.50.970 429 637 7.1E-66 T 14-10-2018 C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 260 395 1.8E-44 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 SUPERFAMILY SSF52518 69 249 7.99E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 Gene3D G3DSA:3.40.50.970 59 240 1.5E-72 T 14-10-2018 C4901_12725 bacd17ff06a4ba5792a6adfe1dd8ec7e 638 Gene3D G3DSA:3.40.50.1220 254 425 8.5E-61 T 14-10-2018 C4901_07440 8c654cfbad28d8bddad580ee733dca4c 499 Gene3D G3DSA:1.20.1600.10 79 487 3.6E-68 T 14-10-2018 C4901_07440 8c654cfbad28d8bddad580ee733dca4c 499 PIRSF PIRSF001892 26 488 5.1E-70 T 14-10-2018 IPR028351 Cyclolysin transport protein CyaE GO:0005215 C4901_07440 8c654cfbad28d8bddad580ee733dca4c 499 Pfam PF02321 Outer membrane efflux protein 100 280 7.3E-20 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_07440 8c654cfbad28d8bddad580ee733dca4c 499 Pfam PF02321 Outer membrane efflux protein 306 481 1.4E-23 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_07440 8c654cfbad28d8bddad580ee733dca4c 499 SUPERFAMILY SSF56954 24 483 5.49E-67 T 14-10-2018 C4901_10030 933847b3da97793fdda1eb3f64cb92c5 267 Gene3D G3DSA:3.40.50.300 22 187 1.7E-29 T 14-10-2018 C4901_10030 933847b3da97793fdda1eb3f64cb92c5 267 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 182 263 1.2E-31 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal C4901_10030 933847b3da97793fdda1eb3f64cb92c5 267 SUPERFAMILY SSF52540 29 225 2.89E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10030 933847b3da97793fdda1eb3f64cb92c5 267 Pfam PF07728 AAA domain (dynein-related subfamily) 36 169 1.9E-30 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 C4901_04725 9282788adc86d5e801d1d6e4ced9c595 131 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 2 94 2.0E-28 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 C4901_04725 9282788adc86d5e801d1d6e4ced9c595 131 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 2 117 1.9E-31 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 C4901_04725 9282788adc86d5e801d1d6e4ced9c595 131 PIRSF PIRSF006113 1 118 1.0E-42 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 C4901_04725 9282788adc86d5e801d1d6e4ced9c595 131 SUPERFAMILY SSF55620 1 117 1.0E-36 T 14-10-2018 C4901_04725 9282788adc86d5e801d1d6e4ced9c595 131 Gene3D G3DSA:3.30.479.10 1 118 2.3E-42 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 C4901_06665 dea7ba144a18d77765a72f5fea20cc6a 246 Pfam PF01061 ABC-2 type transporter 5 206 3.8E-17 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 C4901_04290 10e5e2044cd6ced431351d0ea7c4e73a 295 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 49 236 5.7E-35 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C4901_04290 10e5e2044cd6ced431351d0ea7c4e73a 295 Gene3D G3DSA:1.10.287.470 85 157 4.6E-9 T 14-10-2018 C4901_04290 10e5e2044cd6ced431351d0ea7c4e73a 295 Gene3D G3DSA:2.40.30.170 176 295 1.3E-34 T 14-10-2018 C4901_04290 10e5e2044cd6ced431351d0ea7c4e73a 295 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 235 9.5E-16 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C4901_04290 10e5e2044cd6ced431351d0ea7c4e73a 295 Pfam PF00529 HlyD membrane-fusion protein of T1SS 236 287 5.6E-9 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C4901_04290 10e5e2044cd6ced431351d0ea7c4e73a 295 SUPERFAMILY SSF111369 49 207 5.75E-21 T 14-10-2018 C4901_14560 b5e970af21e21d1473a7e74d790628f1 192 Pfam PF03652 Holliday junction resolvase 46 178 1.5E-35 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C4901_14560 b5e970af21e21d1473a7e74d790628f1 192 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 45 180 22.171 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C4901_14560 b5e970af21e21d1473a7e74d790628f1 192 Gene3D G3DSA:3.30.420.140 43 179 4.4E-36 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 C4901_14560 b5e970af21e21d1473a7e74d790628f1 192 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 48 177 5.2E-33 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 C4901_14560 b5e970af21e21d1473a7e74d790628f1 192 SUPERFAMILY SSF53098 45 178 3.03E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_14560 b5e970af21e21d1473a7e74d790628f1 192 SMART SM00732 45 145 1.7E-25 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 C4901_03275 98a63fade2669cf00b0dd6c9b08f612a 274 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 82 93 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 C4901_03275 98a63fade2669cf00b0dd6c9b08f612a 274 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 5 269 4.5E-68 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C4901_03275 98a63fade2669cf00b0dd6c9b08f612a 274 SUPERFAMILY SSF53790 3 221 8.11E-74 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C4901_03275 98a63fade2669cf00b0dd6c9b08f612a 274 Gene3D G3DSA:3.30.950.10 112 227 9.1E-37 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C4901_03275 98a63fade2669cf00b0dd6c9b08f612a 274 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 205 5.0E-28 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 C4901_03275 98a63fade2669cf00b0dd6c9b08f612a 274 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 4 223 34.374 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C4901_03275 98a63fade2669cf00b0dd6c9b08f612a 274 PIRSF PIRSF005917 1 274 3.6E-90 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 C4901_03275 98a63fade2669cf00b0dd6c9b08f612a 274 Gene3D G3DSA:3.40.1010.10 1 111 1.8E-37 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 C4901_01580 9f5af233f53ff81e00fe0ffacb6af31d 168 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 80 160 2.2E-28 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C4901_01580 9f5af233f53ff81e00fe0ffacb6af31d 168 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 81 162 3.9E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 C4901_01580 9f5af233f53ff81e00fe0ffacb6af31d 168 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 130 136 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 C4901_01580 9f5af233f53ff81e00fe0ffacb6af31d 168 Gene3D G3DSA:1.10.10.10 77 162 5.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_01580 9f5af233f53ff81e00fe0ffacb6af31d 168 SUPERFAMILY SSF46767 80 162 3.92E-28 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 C4901_03480 3064243faf61415328deab38cdc1b11d 191 Pfam PF13808 DDE_Tnp_1-associated 88 180 1.4E-21 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_03480 3064243faf61415328deab38cdc1b11d 191 Pfam PF14236 Domain of unknown function (DUF4338) 4 60 9.7E-14 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_07055 f93ddb706afd5478a8f7dabec5f1c065 275 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 273 15.626 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 C4901_07055 f93ddb706afd5478a8f7dabec5f1c065 275 Pfam PF02673 Bacitracin resistance protein BacA 7 267 3.2E-73 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 C4901_08005 67776d5e2b600adf6017018415650859 255 Pfam PF02616 Segregation and condensation protein ScpA 42 249 4.8E-30 T 14-10-2018 IPR003768 Segregation and condensation protein A C4901_08005 67776d5e2b600adf6017018415650859 255 Hamap MF_01805 Segregation and condensation protein A [scpA]. 25 255 22.067 T 14-10-2018 IPR003768 Segregation and condensation protein A C4901_07505 a6f49ea6daf6ccfc81e82b01f54c68d4 152 Pfam PF01610 Transposase 2 128 3.0E-28 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_05220 31a8bc2e1b75fd9d9c0d7ac9f082f4df 432 Pfam PF01610 Transposase 167 408 1.3E-56 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_05220 31a8bc2e1b75fd9d9c0d7ac9f082f4df 432 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 102 151 9.0E-10 T 14-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain C4901_11835 1d735d66249aee2a7be73497acb82158 657 Gene3D G3DSA:3.60.20.10 2 181 1.0E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_11835 1d735d66249aee2a7be73497acb82158 657 Pfam PF13537 Glutamine amidotransferase domain 48 166 8.0E-44 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain C4901_11835 1d735d66249aee2a7be73497acb82158 657 SUPERFAMILY SSF52402 219 600 4.97E-60 T 14-10-2018 C4901_11835 1d735d66249aee2a7be73497acb82158 657 Pfam PF00733 Asparagine synthase 244 616 1.7E-82 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 C4901_11835 1d735d66249aee2a7be73497acb82158 657 PIRSF PIRSF001589 1 647 6.7E-162 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C4901_11835 1d735d66249aee2a7be73497acb82158 657 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 565 6.5E-143 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 C4901_11835 1d735d66249aee2a7be73497acb82158 657 SUPERFAMILY SSF56235 1 224 6.26E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_15685 916dcab4ccc6c79b128928db07d51c8c 147 SMART SM00953 8 136 1.9E-29 T 14-10-2018 IPR014914 RES domain C4901_15685 916dcab4ccc6c79b128928db07d51c8c 147 Pfam PF08808 RES domain 7 141 1.4E-23 T 14-10-2018 IPR014914 RES domain C4901_02995 04a6f171935c36117b8824a6b8f73ff9 241 Gene3D G3DSA:3.40.50.300 2 241 9.9E-70 T 14-10-2018 C4901_02995 04a6f171935c36117b8824a6b8f73ff9 241 Pfam PF00005 ABC transporter 19 166 6.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_02995 04a6f171935c36117b8824a6b8f73ff9 241 SMART SM00382 28 216 1.0E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_02995 04a6f171935c36117b8824a6b8f73ff9 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.1E-116 T 14-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 C4901_02995 04a6f171935c36117b8824a6b8f73ff9 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_02995 04a6f171935c36117b8824a6b8f73ff9 241 SUPERFAMILY SSF52540 6 237 8.4E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02995 04a6f171935c36117b8824a6b8f73ff9 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 9.7E-8 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal C4901_12275 7d9e9fc7338fd7219dde5d1f7a6e3454 481 SUPERFAMILY SSF56762 2 481 4.97E-127 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_12275 7d9e9fc7338fd7219dde5d1f7a6e3454 481 Gene3D G3DSA:1.10.645.10 1 481 4.1E-131 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_12275 7d9e9fc7338fd7219dde5d1f7a6e3454 481 Pfam PF00374 Nickel-dependent hydrogenase 38 119 9.8E-21 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C4901_12275 7d9e9fc7338fd7219dde5d1f7a6e3454 481 Pfam PF00374 Nickel-dependent hydrogenase 144 481 8.3E-58 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C4901_12275 7d9e9fc7338fd7219dde5d1f7a6e3454 481 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 38 63 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 C4901_06065 008ac33c704d61897142ed4f0e710426 1004 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 37 993 1.4E-285 T 14-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 C4901_06065 008ac33c704d61897142ed4f0e710426 1004 SUPERFAMILY SSF51445 37 888 5.88E-124 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_06065 008ac33c704d61897142ed4f0e710426 1004 Pfam PF00128 Alpha amylase, catalytic domain 57 125 5.4E-12 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06065 008ac33c704d61897142ed4f0e710426 1004 SMART SM00642 44 341 1.6E-4 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06065 008ac33c704d61897142ed4f0e710426 1004 Gene3D G3DSA:3.30.1590.10 127 223 2.4E-19 T 14-10-2018 C4901_06065 008ac33c704d61897142ed4f0e710426 1004 Gene3D G3DSA:3.20.20.80 599 694 1.7E-6 T 14-10-2018 C4901_06065 008ac33c704d61897142ed4f0e710426 1004 Gene3D G3DSA:3.20.20.80 314 463 9.7E-34 T 14-10-2018 C4901_06065 008ac33c704d61897142ed4f0e710426 1004 Gene3D G3DSA:3.20.20.80 758 892 5.6E-36 T 14-10-2018 C4901_06065 008ac33c704d61897142ed4f0e710426 1004 Gene3D G3DSA:3.20.20.80 38 126 4.3E-17 T 14-10-2018 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 2.2E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 106 125 2.2E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 4 17 2.2E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 60 76 2.2E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 82 98 2.2E-37 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 3 154 1.0E-50 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 SUPERFAMILY SSF53098 1 153 1.59E-50 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 112 146 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 Gene3D G3DSA:3.30.420.10 3 157 3.8E-48 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 3 149 2.4E-54 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C4901_13820 6ef3f4439d89fa6a4dd963205666a34f 165 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 46.139 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 C4901_09575 d6381e887a1ae0f5b618a0e908749f87 237 Gene3D G3DSA:3.40.50.300 2 232 1.2E-61 T 14-10-2018 C4901_09575 d6381e887a1ae0f5b618a0e908749f87 237 SMART SM00382 33 222 6.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_09575 d6381e887a1ae0f5b618a0e908749f87 237 Pfam PF00005 ABC transporter 24 172 8.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_09575 d6381e887a1ae0f5b618a0e908749f87 237 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_09575 d6381e887a1ae0f5b618a0e908749f87 237 SUPERFAMILY SSF52540 4 224 1.14E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_06480 980146375a62ecd1742618f2c60db326 211 SUPERFAMILY SSF140931 8 156 3.66E-27 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_06480 980146375a62ecd1742618f2c60db326 211 Pfam PF02661 Fic/DOC family 10 119 2.0E-15 T 14-10-2018 IPR003812 Fido domain C4901_06480 980146375a62ecd1742618f2c60db326 211 Gene3D G3DSA:1.10.3290.10 3 156 2.7E-33 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_01380 e23f05a641fd648fce056cbcb08fc945 320 SMART SM00729 82 287 7.0E-15 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_01380 e23f05a641fd648fce056cbcb08fc945 320 Pfam PF04055 Radical SAM superfamily 88 250 2.0E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_01380 e23f05a641fd648fce056cbcb08fc945 320 Gene3D G3DSA:3.20.20.70 80 290 6.0E-18 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_01380 e23f05a641fd648fce056cbcb08fc945 320 TIGRFAM TIGR00510 lipA: lipoyl synthase 32 313 2.3E-124 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C4901_01380 e23f05a641fd648fce056cbcb08fc945 320 Hamap MF_00206 Lipoyl synthase [lipA]. 1 320 144.655 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C4901_01380 e23f05a641fd648fce056cbcb08fc945 320 PIRSF PIRSF005963 2 319 1.9E-125 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 C4901_01380 e23f05a641fd648fce056cbcb08fc945 320 SUPERFAMILY SSF102114 50 313 7.98E-65 T 14-10-2018 C4901_13220 a4ae097ee153a2e7e9e9b99e9b446a81 585 PIRSF PIRSF001294 1 579 2.9E-224 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 C4901_13220 a4ae097ee153a2e7e9e9b99e9b446a81 585 Pfam PF03814 Potassium-transporting ATPase A subunit 10 575 2.9E-227 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 C4901_13220 a4ae097ee153a2e7e9e9b99e9b446a81 585 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 577 33.711 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 C4901_13220 a4ae097ee153a2e7e9e9b99e9b446a81 585 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 10 576 8.2E-210 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 C4901_13340 cd68c1fd3d99264cb223350b3594419d 307 Gene3D G3DSA:3.30.465.10 20 189 4.8E-49 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C4901_13340 cd68c1fd3d99264cb223350b3594419d 307 SUPERFAMILY SSF55447 195 299 8.5E-16 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily C4901_13340 cd68c1fd3d99264cb223350b3594419d 307 Gene3D G3DSA:3.30.390.50 194 298 6.8E-16 T 14-10-2018 C4901_13340 cd68c1fd3d99264cb223350b3594419d 307 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 21 187 1.2E-44 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 C4901_13340 cd68c1fd3d99264cb223350b3594419d 307 SUPERFAMILY SSF56176 22 188 3.87E-46 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C4901_13340 cd68c1fd3d99264cb223350b3594419d 307 SMART SM01092 195 297 3.1E-10 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal C4901_13340 cd68c1fd3d99264cb223350b3594419d 307 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 196 294 2.9E-12 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal C4901_07105 075450d94f880e3f48ea3e37423b7add 300 Pfam PF01926 50S ribosome-binding GTPase 9 125 2.6E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_07105 075450d94f880e3f48ea3e37423b7add 300 Gene3D G3DSA:3.30.300.20 186 299 1.9E-37 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_07105 075450d94f880e3f48ea3e37423b7add 300 Pfam PF07650 KH domain 209 284 3.4E-16 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_07105 075450d94f880e3f48ea3e37423b7add 300 SUPERFAMILY SSF54814 182 296 1.05E-36 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 C4901_07105 075450d94f880e3f48ea3e37423b7add 300 Hamap MF_00367 GTPase Era [era]. 4 296 32.585 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_07105 075450d94f880e3f48ea3e37423b7add 300 SUPERFAMILY SSF52540 8 182 1.22E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07105 075450d94f880e3f48ea3e37423b7add 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 9 29 2.7E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_07105 075450d94f880e3f48ea3e37423b7add 300 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 58 73 2.7E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 C4901_07105 075450d94f880e3f48ea3e37423b7add 300 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 165 2.4E-19 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 C4901_07105 075450d94f880e3f48ea3e37423b7add 300 TIGRFAM TIGR00436 era: GTP-binding protein Era 7 279 1.5E-72 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_07105 075450d94f880e3f48ea3e37423b7add 300 Gene3D G3DSA:3.40.50.300 2 184 1.8E-41 T 14-10-2018 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 SMART SM00928 328 373 1.5E-26 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 341 352 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 Gene3D G3DSA:3.40.50.11540 52 229 4.2E-80 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 7 414 1.7E-196 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 Pfam PF10531 SLBB domain 242 290 5.7E-15 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 Gene3D G3DSA:1.20.1440.230 326 423 1.1E-34 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 SUPERFAMILY SSF140490 324 421 9.02E-39 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 Gene3D G3DSA:3.10.20.600 231 325 2.6E-34 T 14-10-2018 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 SUPERFAMILY SSF142984 240 323 1.7E-26 T 14-10-2018 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 47 218 8.8E-47 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 SUPERFAMILY SSF142019 5 238 1.31E-83 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04580 b1e1b7dc1aa8b65408ad62c81b7f439f 425 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 330 413 4.0E-32 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_01235 0fc1a6d912b462fe40755443990befd2 269 TIGRFAM TIGR04255 sporadTIGR04255: TIGR04255 family protein 25 265 4.7E-35 T 14-10-2018 IPR026349 Conserved hypothetical protein CHP04255 C4901_14070 b9b0add6fb0fdba56f51c247703e13b7 105 SMART SM00739 3 30 0.0013 T 14-10-2018 IPR005824 KOW C4901_14070 b9b0add6fb0fdba56f51c247703e13b7 105 Pfam PF00467 KOW motif 6 36 2.0E-5 T 14-10-2018 IPR005824 KOW C4901_14070 b9b0add6fb0fdba56f51c247703e13b7 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 103 1.4E-34 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14070 b9b0add6fb0fdba56f51c247703e13b7 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 102 5.9E-22 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14070 b9b0add6fb0fdba56f51c247703e13b7 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 2 97 19.041 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14070 b9b0add6fb0fdba56f51c247703e13b7 105 SUPERFAMILY SSF50104 3 102 3.36E-30 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily C4901_14070 b9b0add6fb0fdba56f51c247703e13b7 105 Gene3D G3DSA:2.30.30.30 1 104 1.6E-34 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 C4901_16610 1ab7393cc896c08c5e2e764eda33b7bf 398 Gene3D G3DSA:3.40.50.150 110 375 2.8E-98 T 14-10-2018 C4901_16610 1ab7393cc896c08c5e2e764eda33b7bf 398 PIRSF PIRSF003085 1 388 5.0E-132 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 C4901_16610 1ab7393cc896c08c5e2e764eda33b7bf 398 Pfam PF02353 Mycolic acid cyclopropane synthetase 105 368 8.4E-92 T 14-10-2018 C4901_16610 1ab7393cc896c08c5e2e764eda33b7bf 398 SUPERFAMILY SSF53335 112 372 2.15E-78 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_12200 f833f3aa105b327a1cabc183cd64402a 382 PIRSF PIRSF005622 1 369 1.8E-149 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 C4901_12200 f833f3aa105b327a1cabc183cd64402a 382 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 4 367 3.9E-138 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 C4901_12200 f833f3aa105b327a1cabc183cd64402a 382 Gene3D G3DSA:3.40.50.11750 25 260 1.7E-103 T 14-10-2018 C4901_12200 f833f3aa105b327a1cabc183cd64402a 382 Gene3D G3DSA:3.40.50.11740 61 301 1.7E-103 T 14-10-2018 C4901_12200 f833f3aa105b327a1cabc183cd64402a 382 Gene3D G3DSA:1.10.10.2140 315 366 7.8E-24 T 14-10-2018 C4901_12200 f833f3aa105b327a1cabc183cd64402a 382 Pfam PF01924 Hydrogenase formation hypA family 13 364 1.0E-146 T 14-10-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 C4901_16890 2c8b062fb6644c7754e0649fa293dd2e 203 Pfam PF09499 ApaLI-like restriction endonuclease 3 189 6.4E-94 T 14-10-2018 IPR019036 Restriction endonuclease, type II, ApaLI C4901_07590 553d20b966e7dc77dba9d01bd8119774 109 SUPERFAMILY SSF47413 18 97 5.63E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_07590 553d20b966e7dc77dba9d01bd8119774 109 Gene3D G3DSA:1.10.260.40 18 81 3.4E-20 T 14-10-2018 C4901_07590 553d20b966e7dc77dba9d01bd8119774 109 Pfam PF13744 Helix-turn-helix domain 11 89 1.8E-25 T 14-10-2018 IPR039554 HigA2-like, helix-turn-helix domain C4901_12295 713f93147666487bf59213997a893de1 97 Pfam PF12674 Putative zinc ribbon domain 21 91 5.1E-10 T 14-10-2018 IPR025868 Putative zinc ribbon domain C4901_15830 326f07a1e5ceb1289f27314b7357cfa7 423 Gene3D G3DSA:3.40.50.12710 52 421 5.5E-103 T 14-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 C4901_15830 326f07a1e5ceb1289f27314b7357cfa7 423 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 116 351 4.2E-39 T 14-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 C4901_15830 326f07a1e5ceb1289f27314b7357cfa7 423 SUPERFAMILY SSF53335 67 412 7.83E-81 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_02850 f5fa11603055faba4f3335938dcf5141 240 Gene3D G3DSA:3.40.50.620 31 239 1.1E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_02850 f5fa11603055faba4f3335938dcf5141 240 Pfam PF01467 Cytidylyltransferase-like 33 205 6.9E-26 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C4901_02850 f5fa11603055faba4f3335938dcf5141 240 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 32 94 4.3E-11 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C4901_02850 f5fa11603055faba4f3335938dcf5141 240 SUPERFAMILY SSF52374 31 234 6.88E-44 T 14-10-2018 C4901_02850 f5fa11603055faba4f3335938dcf5141 240 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 29 232 29.711 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C4901_02850 f5fa11603055faba4f3335938dcf5141 240 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 33 231 5.4E-43 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C4901_00345 9f37f460241dae163c982ef412a48c52 320 SUPERFAMILY SSF53448 5 249 7.31E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_00345 9f37f460241dae163c982ef412a48c52 320 Gene3D G3DSA:3.90.550.10 1 227 4.3E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_00345 9f37f460241dae163c982ef412a48c52 320 Pfam PF00535 Glycosyl transferase family 2 9 153 7.4E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_08880 a205107821600312bac737b3331be4f6 274 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 254 7.3E-82 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 C4901_08880 a205107821600312bac737b3331be4f6 274 PIRSF PIRSF005902 1 258 4.6E-73 T 14-10-2018 IPR001130 TatD family GO:0016788 C4901_08880 a205107821600312bac737b3331be4f6 274 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 C4901_08880 a205107821600312bac737b3331be4f6 274 Gene3D G3DSA:3.20.20.140 1 259 1.2E-88 T 14-10-2018 C4901_08880 a205107821600312bac737b3331be4f6 274 Pfam PF01026 TatD related DNase 4 254 4.6E-75 T 14-10-2018 IPR001130 TatD family GO:0016788 C4901_08880 a205107821600312bac737b3331be4f6 274 SUPERFAMILY SSF51556 3 254 4.18E-83 T 14-10-2018 IPR032466 Metal-dependent hydrolase C4901_01460 7e1bcc773147048d6d5092419abc939f 477 SUPERFAMILY SSF89095 296 402 3.92E-33 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 C4901_01460 7e1bcc773147048d6d5092419abc939f 477 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 475 4.3E-170 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 C4901_01460 7e1bcc773147048d6d5092419abc939f 477 SMART SM00845 327 475 4.3E-77 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 C4901_01460 7e1bcc773147048d6d5092419abc939f 477 Gene3D G3DSA:1.10.150.380 296 408 7.7E-33 T 14-10-2018 C4901_01460 7e1bcc773147048d6d5092419abc939f 477 Pfam PF02637 GatB domain 328 475 8.0E-49 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 C4901_01460 7e1bcc773147048d6d5092419abc939f 477 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 476 37.601 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 C4901_01460 7e1bcc773147048d6d5092419abc939f 477 Gene3D G3DSA:1.10.10.410 415 476 7.9E-26 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal C4901_01460 7e1bcc773147048d6d5092419abc939f 477 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 143 157 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 C4901_01460 7e1bcc773147048d6d5092419abc939f 477 Pfam PF02934 GatB/GatE catalytic domain 5 287 9.7E-111 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 C4901_01460 7e1bcc773147048d6d5092419abc939f 477 SUPERFAMILY SSF55931 4 295 3.2E-118 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 C4901_03650 7e1065902bb5b36b01c303036fce2b09 415 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 2.2E-54 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03650 7e1065902bb5b36b01c303036fce2b09 415 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 2.2E-54 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03650 7e1065902bb5b36b01c303036fce2b09 415 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 2.2E-54 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03650 7e1065902bb5b36b01c303036fce2b09 415 PRINTS PR00758 Arsenical pump membrane protein signature 284 308 2.2E-54 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03650 7e1065902bb5b36b01c303036fce2b09 415 Pfam PF02040 Arsenical pump membrane protein 3 319 1.5E-98 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03650 7e1065902bb5b36b01c303036fce2b09 415 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 320 3.8E-134 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_01585 314a371767900129cf6925580c07ec38 81 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 39 1.1E-7 T 14-10-2018 C4901_01585 314a371767900129cf6925580c07ec38 81 Gene3D G3DSA:3.40.1620.10 1 38 6.6E-9 T 14-10-2018 C4901_01585 314a371767900129cf6925580c07ec38 81 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 42 6.8E-10 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_01585 314a371767900129cf6925580c07ec38 81 SUPERFAMILY SSF143120 1 41 6.67E-10 T 14-10-2018 IPR036165 YefM-like superfamily C4901_00490 cb79a93a15c536e5ddad504ae19950e9 179 SUPERFAMILY SSF52833 31 162 3.76E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_00490 cb79a93a15c536e5ddad504ae19950e9 179 Pfam PF13098 Thioredoxin-like domain 29 160 2.7E-8 T 14-10-2018 IPR012336 Thioredoxin-like fold C4901_00490 cb79a93a15c536e5ddad504ae19950e9 179 Gene3D G3DSA:3.40.30.10 26 171 3.3E-28 T 14-10-2018 C4901_08625 652c191ff758a705a2d6515f53ce77c2 670 Pfam PF00361 Proton-conducting membrane transporter 135 425 2.7E-54 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08625 652c191ff758a705a2d6515f53ce77c2 670 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 171 195 7.3E-10 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08625 652c191ff758a705a2d6515f53ce77c2 670 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 245 269 7.3E-10 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08625 652c191ff758a705a2d6515f53ce77c2 670 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 396 422 7.3E-10 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02530 c050c43a5bf51ccc263787065e8a946f 189 SUPERFAMILY SSF143422 3 65 6.93E-11 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_02530 c050c43a5bf51ccc263787065e8a946f 189 Pfam PF01797 Transposase IS200 like 67 113 2.3E-8 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_02530 c050c43a5bf51ccc263787065e8a946f 189 Pfam PF01797 Transposase IS200 like 3 65 1.6E-9 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_02530 c050c43a5bf51ccc263787065e8a946f 189 Gene3D G3DSA:3.30.70.1290 66 117 1.2E-5 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_02530 c050c43a5bf51ccc263787065e8a946f 189 Gene3D G3DSA:3.30.70.1290 1 65 2.0E-7 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_02530 c050c43a5bf51ccc263787065e8a946f 189 SUPERFAMILY SSF143422 67 113 1.83E-8 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_12100 89c439714b38a77c559dd4495233856b 243 Pfam PF14236 Domain of unknown function (DUF4338) 117 197 1.8E-18 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 Pfam PF00162 Phosphoglycerate kinase 6 378 4.6E-147 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 SUPERFAMILY SSF53748 4 389 2.24E-149 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 Gene3D G3DSA:3.40.50.1260 8 387 6.9E-156 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 309 334 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 365 382 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 342 353 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 133 155 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 105 120 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 164 186 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 187 206 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 7.2E-81 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 Gene3D G3DSA:3.40.50.1260 166 379 6.9E-156 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 389 40.704 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_14470 d817df7dd5a53f36a1798cb0af77cc2a 393 PIRSF PIRSF000724 1 392 9.7E-140 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_16615 e8658d5aaad4f4dae0f90e8574bbcb0e 352 Pfam PF04173 TQO small subunit DoxD 24 171 1.6E-28 T 14-10-2018 IPR007301 TQO small subunit DoxD KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 C4901_16615 e8658d5aaad4f4dae0f90e8574bbcb0e 352 Pfam PF07680 TQO small subunit DoxA 232 347 1.4E-10 T 14-10-2018 IPR011636 Thiosulphate:quinone oxidoreductase small subunit DoxA KEGG: 00920+1.8.5.2|MetaCyc: PWY-5303 C4901_05690 059ba855f2741f6679161debac25164a 427 SUPERFAMILY SSF141868 45 268 2.88E-54 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05690 059ba855f2741f6679161debac25164a 427 Gene3D G3DSA:3.20.20.450 41 272 2.8E-54 T 14-10-2018 IPR035919 EAL domain superfamily C4901_05690 059ba855f2741f6679161debac25164a 427 SMART SM00052 13 268 1.5E-27 T 14-10-2018 IPR001633 EAL domain C4901_05690 059ba855f2741f6679161debac25164a 427 SUPERFAMILY SSF103190 323 421 3.37E-10 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C4901_05690 059ba855f2741f6679161debac25164a 427 Pfam PF00563 EAL domain 44 263 1.0E-44 T 14-10-2018 IPR001633 EAL domain C4901_03000 18df086960d1cb43f20d91d79de86070 168 Pfam PF03968 OstA-like protein 31 139 2.1E-14 T 14-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal C4901_03000 18df086960d1cb43f20d91d79de86070 168 Gene3D G3DSA:2.60.450.10 22 155 7.0E-24 T 14-10-2018 C4901_03000 18df086960d1cb43f20d91d79de86070 168 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 22 156 1.5E-24 T 14-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 C4901_11250 72fed23bdce92b98ee4530a716318f8c 189 Pfam PF08238 Sel1 repeat 134 169 2.3E-10 T 14-10-2018 IPR006597 Sel1-like repeat C4901_11250 72fed23bdce92b98ee4530a716318f8c 189 Gene3D G3DSA:1.25.40.10 102 188 6.0E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_11250 72fed23bdce92b98ee4530a716318f8c 189 SMART SM00671 134 169 1.0E-11 T 14-10-2018 IPR006597 Sel1-like repeat C4901_11250 72fed23bdce92b98ee4530a716318f8c 189 SUPERFAMILY SSF81901 118 180 6.28E-14 T 14-10-2018 C4901_00660 50431535096cb113eb3054b6e7a5fcd3 59 ProSitePatterns PS00202 Rubredoxin signature. 38 48 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 C4901_00660 50431535096cb113eb3054b6e7a5fcd3 59 Pfam PF00301 Rubredoxin 9 54 5.5E-21 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C4901_00660 50431535096cb113eb3054b6e7a5fcd3 59 SUPERFAMILY SSF57802 7 58 1.16E-21 T 14-10-2018 C4901_00660 50431535096cb113eb3054b6e7a5fcd3 59 PIRSF PIRSF000071 1 59 4.0E-24 T 14-10-2018 IPR024922 Rubredoxin GO:0005506|GO:0009055 C4901_00660 50431535096cb113eb3054b6e7a5fcd3 59 PRINTS PR00163 Rubredoxin signature 38 54 2.9E-8 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C4901_00660 50431535096cb113eb3054b6e7a5fcd3 59 PRINTS PR00163 Rubredoxin signature 8 24 2.9E-8 T 14-10-2018 IPR024935 Rubredoxin domain GO:0005506 C4901_00660 50431535096cb113eb3054b6e7a5fcd3 59 Gene3D G3DSA:2.20.28.10 1 59 9.0E-27 T 14-10-2018 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 Gene3D G3DSA:3.30.70.260 349 423 1.7E-162 T 14-10-2018 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 SUPERFAMILY SSF55347 137 302 3.4E-53 T 14-10-2018 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 Pfam PF00742 Homoserine dehydrogenase 137 315 7.3E-65 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 Gene3D G3DSA:3.30.360.10 136 348 1.7E-162 T 14-10-2018 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 Pfam PF01842 ACT domain 355 420 3.0E-14 T 14-10-2018 IPR002912 ACT domain C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 Gene3D G3DSA:3.40.50.720 4 340 1.7E-162 T 14-10-2018 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 PIRSF PIRSF000098 1 434 5.6E-158 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 2.2E-18 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 SUPERFAMILY SSF51735 2 158 1.15E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_09460 7e5743e7559408c42f8ec653c89b90de 436 SUPERFAMILY SSF55021 354 423 8.89E-12 T 14-10-2018 C4901_09335 e3841b81309d131cee86b3427d4ec9a6 88 SUPERFAMILY SSF143011 1 83 7.85E-9 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_09335 e3841b81309d131cee86b3427d4ec9a6 88 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 86 9.7E-14 T 14-10-2018 IPR007711 Toxin HigB-1 C4901_09335 e3841b81309d131cee86b3427d4ec9a6 88 Gene3D G3DSA:3.30.2310.20 1 88 1.0E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_04730 e230f3f685cd622547028e6747bd4991 215 Gene3D G3DSA:1.10.150.240 18 84 3.4E-54 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C4901_04730 e230f3f685cd622547028e6747bd4991 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 91 179 2.2E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_04730 e230f3f685cd622547028e6747bd4991 215 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 6 212 3.4E-54 T 14-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 C4901_04730 e230f3f685cd622547028e6747bd4991 215 Gene3D G3DSA:3.40.50.1000 6 202 3.4E-54 T 14-10-2018 IPR023214 HAD superfamily C4901_04730 e230f3f685cd622547028e6747bd4991 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 181 5.6E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_04730 e230f3f685cd622547028e6747bd4991 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 184 3.8E-28 T 14-10-2018 C4901_04730 e230f3f685cd622547028e6747bd4991 215 SUPERFAMILY SSF56784 4 214 1.01E-52 T 14-10-2018 IPR036412 HAD-like superfamily C4901_05610 c09d3eb7df2634656660dc300866a0dd 208 Gene3D G3DSA:3.40.30.10 1 77 2.9E-24 T 14-10-2018 C4901_05610 c09d3eb7df2634656660dc300866a0dd 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 79 2.1E-16 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_05610 c09d3eb7df2634656660dc300866a0dd 208 SUPERFAMILY SSF52833 1 88 1.16E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_05610 c09d3eb7df2634656660dc300866a0dd 208 SUPERFAMILY SSF47616 72 199 4.89E-25 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C4901_05610 c09d3eb7df2634656660dc300866a0dd 208 Gene3D G3DSA:1.20.1050.10 84 198 6.2E-27 T 14-10-2018 C4901_05610 c09d3eb7df2634656660dc300866a0dd 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 128 193 4.5E-10 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 SUPERFAMILY SSF55785 342 454 7.68E-27 T 14-10-2018 IPR035965 PAS domain superfamily C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 Gene3D G3DSA:3.30.450.20 327 450 5.5E-34 T 14-10-2018 C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 Pfam PF00990 Diguanylate cyclase, GGDEF domain 458 613 5.1E-47 T 14-10-2018 IPR000160 GGDEF domain C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 SMART SM00052 629 874 2.8E-28 T 14-10-2018 IPR001633 EAL domain C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 SUPERFAMILY SSF55073 463 621 3.73E-50 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 SUPERFAMILY SSF141868 636 875 4.45E-46 T 14-10-2018 IPR035919 EAL domain superfamily C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 Gene3D G3DSA:3.30.70.270 452 631 4.2E-56 T 14-10-2018 C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 SMART SM00267 447 619 4.4E-62 T 14-10-2018 IPR000160 GGDEF domain C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 455 617 6.5E-42 T 14-10-2018 IPR000160 GGDEF domain C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 Pfam PF00989 PAS fold 333 443 4.1E-17 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 329 453 2.6E-26 T 14-10-2018 IPR000014 PAS domain C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 Pfam PF00563 EAL domain 637 868 8.4E-48 T 14-10-2018 IPR001633 EAL domain C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 SMART SM00091 331 397 4.6E-10 T 14-10-2018 IPR000014 PAS domain C4901_14690 000b8b2c93328d1bcc16d3721baca9d4 902 Gene3D G3DSA:3.20.20.450 632 882 1.3E-54 T 14-10-2018 IPR035919 EAL domain superfamily C4901_13450 19ad582ec2d7404d710ba2ed330666c6 253 SUPERFAMILY SSF48498 95 217 6.67E-40 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C4901_13450 19ad582ec2d7404d710ba2ed330666c6 253 SUPERFAMILY SSF46689 18 94 1.69E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_13450 19ad582ec2d7404d710ba2ed330666c6 253 Gene3D G3DSA:1.10.357.10 76 216 5.6E-49 T 14-10-2018 C4901_13450 19ad582ec2d7404d710ba2ed330666c6 253 Pfam PF08362 YcdC-like protein, C-terminal region 76 217 1.1E-48 T 14-10-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 C4901_13450 19ad582ec2d7404d710ba2ed330666c6 253 Gene3D G3DSA:1.10.10.60 16 75 9.3E-18 T 14-10-2018 C4901_13450 19ad582ec2d7404d710ba2ed330666c6 253 Pfam PF00440 Bacterial regulatory proteins, tetR family 29 75 8.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_13450 19ad582ec2d7404d710ba2ed330666c6 253 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 42 8.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_13450 19ad582ec2d7404d710ba2ed330666c6 253 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 50 73 8.7E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_09435 878ba23df632bda0cd90c0530f580e83 258 SUPERFAMILY SSF53098 2 220 8.93E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_09435 878ba23df632bda0cd90c0530f580e83 258 Gene3D G3DSA:3.30.420.10 3 211 1.4E-16 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_09435 878ba23df632bda0cd90c0530f580e83 258 Pfam PF10108 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB 45 253 1.1E-82 T 14-10-2018 IPR019288 Predicted 3'-5' exonuclease, PolB-like C4901_04010 9220288ce576e5cef8bb197497fb4f0e 153 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 8 152 29.296 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 C4901_04010 9220288ce576e5cef8bb197497fb4f0e 153 Pfam PF00692 dUTPase 18 151 1.3E-31 T 14-10-2018 IPR029054 dUTPase-like C4901_04010 9220288ce576e5cef8bb197497fb4f0e 153 SUPERFAMILY SSF51283 6 152 2.62E-46 T 14-10-2018 IPR036157 dUTPase-like superfamily C4901_04010 9220288ce576e5cef8bb197497fb4f0e 153 TIGRFAM TIGR00576 dut: dUTP diphosphatase 13 151 5.0E-40 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 C4901_04010 9220288ce576e5cef8bb197497fb4f0e 153 Gene3D G3DSA:2.70.40.10 2 151 9.1E-45 T 14-10-2018 IPR036157 dUTPase-like superfamily C4901_07160 7cf009b943ec25ebb425576b0b8f46c3 435 SUPERFAMILY SSF56059 113 318 3.18E-31 T 14-10-2018 C4901_07160 7cf009b943ec25ebb425576b0b8f46c3 435 SMART SM01209 111 289 0.0029 T 14-10-2018 C4901_07160 7cf009b943ec25ebb425576b0b8f46c3 435 Pfam PF13535 ATP-grasp domain 146 295 3.8E-28 T 14-10-2018 C4901_07160 7cf009b943ec25ebb425576b0b8f46c3 435 Gene3D G3DSA:3.30.470.20 103 409 2.4E-70 T 14-10-2018 C4901_07205 006f83e6525cc16cb7714e15edb47841 198 Pfam PF08281 Sigma-70, region 4 133 184 1.4E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_07205 006f83e6525cc16cb7714e15edb47841 198 SUPERFAMILY SSF88659 121 189 2.99E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_07205 006f83e6525cc16cb7714e15edb47841 198 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 58 89 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_07205 006f83e6525cc16cb7714e15edb47841 198 Pfam PF04542 Sigma-70 region 2 37 104 4.0E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C4901_07205 006f83e6525cc16cb7714e15edb47841 198 Gene3D G3DSA:1.10.1740.10 15 112 1.8E-27 T 14-10-2018 C4901_07205 006f83e6525cc16cb7714e15edb47841 198 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 187 7.8E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C4901_07205 006f83e6525cc16cb7714e15edb47841 198 Gene3D G3DSA:1.10.10.10 113 191 6.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07205 006f83e6525cc16cb7714e15edb47841 198 SUPERFAMILY SSF88946 14 121 3.77E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C4901_10205 19d45577948f332846faeabe8f5b3bc7 224 Gene3D G3DSA:1.20.1250.20 17 220 8.0E-15 T 14-10-2018 C4901_10205 19d45577948f332846faeabe8f5b3bc7 224 SUPERFAMILY SSF103473 20 221 1.44E-19 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_09990 a7d2b90838cd242bc047cbddc099d1bc 290 SUPERFAMILY SSF103481 42 141 1.11E-13 T 14-10-2018 C4901_09990 a7d2b90838cd242bc047cbddc099d1bc 290 Pfam PF00892 EamA-like transporter family 14 138 7.1E-23 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_09990 a7d2b90838cd242bc047cbddc099d1bc 290 Pfam PF00892 EamA-like transporter family 148 283 2.5E-22 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_09990 a7d2b90838cd242bc047cbddc099d1bc 290 SUPERFAMILY SSF103481 183 287 1.83E-14 T 14-10-2018 C4901_09805 473b2de6f7d589628cdafbe3d8488881 250 Pfam PF02798 Glutathione S-transferase, N-terminal domain 31 96 2.4E-10 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_09805 473b2de6f7d589628cdafbe3d8488881 250 Gene3D G3DSA:1.20.1050.130 27 161 2.6E-21 T 14-10-2018 C4901_09805 473b2de6f7d589628cdafbe3d8488881 250 SUPERFAMILY SSF52833 31 101 2.2E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_12070 4ef4ac07ea610f8b35efb93fc7e3d0aa 298 SUPERFAMILY SSF51735 14 178 9.73E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_12070 4ef4ac07ea610f8b35efb93fc7e3d0aa 298 SUPERFAMILY SSF48179 181 289 2.27E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_12070 4ef4ac07ea610f8b35efb93fc7e3d0aa 298 Gene3D G3DSA:1.10.3660.10 185 290 5.3E-29 T 14-10-2018 C4901_12070 4ef4ac07ea610f8b35efb93fc7e3d0aa 298 Gene3D G3DSA:3.40.50.720 10 184 3.3E-55 T 14-10-2018 C4901_12070 4ef4ac07ea610f8b35efb93fc7e3d0aa 298 Pfam PF02153 Prephenate dehydrogenase 27 280 1.1E-64 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 C4901_03995 68035884b0a010e8f6e8ce0b9185ac48 135 SUPERFAMILY SSF75169 26 135 6.18E-23 T 14-10-2018 IPR027396 DsrEFH-like C4901_03995 68035884b0a010e8f6e8ce0b9185ac48 135 Gene3D G3DSA:3.40.1260.10 23 135 1.3E-27 T 14-10-2018 IPR027396 DsrEFH-like C4901_03995 68035884b0a010e8f6e8ce0b9185ac48 135 Pfam PF02635 DsrE/DsrF-like family 49 135 2.3E-9 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_04760 34c8cda07892773c2256b5e7711ba166 692 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 299 353 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 SUPERFAMILY SSF81442 54 577 4.58E-145 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 Gene3D G3DSA:1.20.210.10 42 585 5.2E-162 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 430 449 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 367 388 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 116 139 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 58 83 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 143 167 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 235 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 358 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 402 420 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 479 500 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 246 265 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 PRINTS PR01165 Cytochrome c oxidase subunit I signature 297 318 7.2E-72 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04760 34c8cda07892773c2256b5e7711ba166 692 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 67 519 1.4E-116 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_08030 67de5450673e5f89fa462094015f103e 79 Gene3D G3DSA:3.30.1320.10 1 79 6.8E-29 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08030 67de5450673e5f89fa462094015f103e 79 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 1.1E-25 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08030 67de5450673e5f89fa462094015f103e 79 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_08030 67de5450673e5f89fa462094015f103e 79 SUPERFAMILY SSF54565 1 78 1.18E-26 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08030 67de5450673e5f89fa462094015f103e 79 Pfam PF00886 Ribosomal protein S16 8 68 1.6E-21 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08030 67de5450673e5f89fa462094015f103e 79 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 22.212 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_12455 3e0b6dbb006e5269ef5d3aa682936467 201 SUPERFAMILY SSF53448 1 184 2.35E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_12455 3e0b6dbb006e5269ef5d3aa682936467 201 Gene3D G3DSA:3.90.550.10 1 191 1.0E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_12455 3e0b6dbb006e5269ef5d3aa682936467 201 Pfam PF12804 MobA-like NTP transferase domain 4 162 4.8E-34 T 14-10-2018 IPR025877 MobA-like NTP transferase C4901_01065 182f5be6e3379dc9098d68077c74bf64 121 Pfam PF00892 EamA-like transporter family 51 119 2.0E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_01065 182f5be6e3379dc9098d68077c74bf64 121 Gene3D G3DSA:1.10.3730.20 3 121 2.6E-6 T 14-10-2018 C4901_01065 182f5be6e3379dc9098d68077c74bf64 121 SUPERFAMILY SSF103481 43 120 1.15E-10 T 14-10-2018 C4901_14250 8c6f8480df623bfb088125d9b15c8cc4 242 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 3 240 1.6E-36 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C4901_14250 8c6f8480df623bfb088125d9b15c8cc4 242 SUPERFAMILY SSF53067 1 112 1.68E-17 T 14-10-2018 C4901_14250 8c6f8480df623bfb088125d9b15c8cc4 242 SUPERFAMILY SSF53067 115 240 1.38E-27 T 14-10-2018 C4901_14250 8c6f8480df623bfb088125d9b15c8cc4 242 Pfam PF03309 Type III pantothenate kinase 3 196 1.7E-41 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C4901_14250 8c6f8480df623bfb088125d9b15c8cc4 242 Gene3D G3DSA:3.30.420.490 116 233 1.5E-60 T 14-10-2018 C4901_14250 8c6f8480df623bfb088125d9b15c8cc4 242 Gene3D G3DSA:3.30.420.40 3 238 1.5E-60 T 14-10-2018 C4901_14250 8c6f8480df623bfb088125d9b15c8cc4 242 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 242 16.903 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 C4901_15655 6fca2e23326d80174edc4a3153473908 325 Pfam PF00005 ABC transporter 28 185 2.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_15655 6fca2e23326d80174edc4a3153473908 325 Gene3D G3DSA:3.40.50.300 7 321 8.2E-90 T 14-10-2018 C4901_15655 6fca2e23326d80174edc4a3153473908 325 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_15655 6fca2e23326d80174edc4a3153473908 325 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 301 8.4E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 C4901_15655 6fca2e23326d80174edc4a3153473908 325 SUPERFAMILY SSF52540 10 256 1.28E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15655 6fca2e23326d80174edc4a3153473908 325 SMART SM00382 36 235 1.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_15655 6fca2e23326d80174edc4a3153473908 325 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 318 4.6E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 C4901_04875 4d9e3267fb286578cffe459114614331 83 Pfam PF14076 Domain of unknown function (DUF4258) 7 79 7.6E-8 T 14-10-2018 IPR025354 Protein of unknown function DUF4258 C4901_08870 14d03a7393d1c7887a00c7bd83806611 316 SUPERFAMILY SSF52540 5 194 9.19E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08870 14d03a7393d1c7887a00c7bd83806611 316 Gene3D G3DSA:3.40.50.300 2 161 1.6E-47 T 14-10-2018 C4901_08870 14d03a7393d1c7887a00c7bd83806611 316 Pfam PF13177 DNA polymerase III, delta subunit 15 161 1.5E-40 T 14-10-2018 C4901_08870 14d03a7393d1c7887a00c7bd83806611 316 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 14 194 5.5E-56 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 Gene3D G3DSA:1.10.10.10 1 88 1.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 Gene3D G3DSA:3.40.190.290 93 296 2.5E-33 T 14-10-2018 C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 Pfam PF03466 LysR substrate binding domain 92 275 2.6E-30 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 64 9.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 SUPERFAMILY SSF46785 4 113 2.61E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 SUPERFAMILY SSF53850 92 293 1.33E-29 T 14-10-2018 C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_07860 7d41569d0b2aa1f9bb198a9b144d1b0e 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.3E-8 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_13295 6af261461cdbe7a0eabe108e3eb66870 464 Gene3D G3DSA:1.10.4160.10 5 369 4.3E-15 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily C4901_13295 6af261461cdbe7a0eabe108e3eb66870 464 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 14 369 1.2E-15 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 C4901_13295 6af261461cdbe7a0eabe108e3eb66870 464 PIRSF PIRSF002744 1 457 1.8E-48 T 14-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 C4901_05300 cbbabc626c13b05bc27da3d00e9ec5e0 209 Gene3D G3DSA:1.10.357.10 14 204 2.7E-25 T 14-10-2018 C4901_05300 cbbabc626c13b05bc27da3d00e9ec5e0 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 35 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_05300 cbbabc626c13b05bc27da3d00e9ec5e0 209 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 43 66 1.3E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_05300 cbbabc626c13b05bc27da3d00e9ec5e0 209 SUPERFAMILY SSF46689 16 90 2.28E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_05300 cbbabc626c13b05bc27da3d00e9ec5e0 209 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 1.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_10385 96facc41e5d78356728d383396acd9c1 148 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 4 146 34.101 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C4901_10385 96facc41e5d78356728d383396acd9c1 148 Gene3D G3DSA:3.10.129.10 1 147 3.3E-57 T 14-10-2018 C4901_10385 96facc41e5d78356728d383396acd9c1 148 SUPERFAMILY SSF54637 6 143 3.45E-47 T 14-10-2018 IPR029069 HotDog domain superfamily C4901_10385 96facc41e5d78356728d383396acd9c1 148 Pfam PF07977 FabA-like domain 13 137 1.4E-35 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C4901_10385 96facc41e5d78356728d383396acd9c1 148 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 4 143 7.2E-59 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 59 66 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 278 301 2.7E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 145 156 2.7E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 2.7E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 59 78 2.7E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 SUPERFAMILY SSF53671 11 314 1.44E-92 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 166 311 1.9E-25 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 Gene3D G3DSA:3.40.50.1370 13 310 2.4E-88 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 12 315 40.626 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 275 3.4E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 144 161 3.4E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 229 238 3.4E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 294 308 3.4E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 49 71 3.4E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 PRINTS PR00101 Aspartate carbamoyltransferase signature 87 96 3.4E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 157 6.7E-39 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 13 312 1.2E-88 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14570 00ee57a60d6987afa8da092b20b8083d 323 Gene3D G3DSA:3.40.50.1370 145 300 2.4E-88 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 C4901_16275 faf115b6207dc431738377baae952364 468 Gene3D G3DSA:3.50.50.60 255 396 6.6E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_16275 faf115b6207dc431738377baae952364 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 455 6.3E-27 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_16275 faf115b6207dc431738377baae952364 468 Gene3D G3DSA:1.10.1060.10 10 142 1.0E-31 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_16275 faf115b6207dc431738377baae952364 468 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 132 8.8E-38 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 C4901_16275 faf115b6207dc431738377baae952364 468 PRINTS PR00419 Adrenodoxin reductase family signature 147 169 1.8E-34 T 14-10-2018 C4901_16275 faf115b6207dc431738377baae952364 468 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 1.8E-34 T 14-10-2018 C4901_16275 faf115b6207dc431738377baae952364 468 PRINTS PR00419 Adrenodoxin reductase family signature 322 335 1.8E-34 T 14-10-2018 C4901_16275 faf115b6207dc431738377baae952364 468 PRINTS PR00419 Adrenodoxin reductase family signature 212 222 1.8E-34 T 14-10-2018 C4901_16275 faf115b6207dc431738377baae952364 468 PRINTS PR00419 Adrenodoxin reductase family signature 170 183 1.8E-34 T 14-10-2018 C4901_16275 faf115b6207dc431738377baae952364 468 SUPERFAMILY SSF51971 144 397 1.18E-68 T 14-10-2018 C4901_16275 faf115b6207dc431738377baae952364 468 SUPERFAMILY SSF46548 5 156 3.45E-40 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_16275 faf115b6207dc431738377baae952364 468 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 5 467 7.4E-229 T 14-10-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 C4901_16275 faf115b6207dc431738377baae952364 468 Gene3D G3DSA:3.50.50.60 143 254 8.4E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06460 a4ac9f8743c44c547cb3f9328092d447 202 Pfam PF01381 Helix-turn-helix 23 75 5.0E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_06460 a4ac9f8743c44c547cb3f9328092d447 202 SMART SM00530 22 77 6.7E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_06460 a4ac9f8743c44c547cb3f9328092d447 202 Pfam PF07883 Cupin domain 129 195 2.1E-10 T 14-10-2018 IPR013096 Cupin 2, conserved barrel C4901_06460 a4ac9f8743c44c547cb3f9328092d447 202 SUPERFAMILY SSF47413 15 82 6.47E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_06460 a4ac9f8743c44c547cb3f9328092d447 202 Gene3D G3DSA:2.60.120.10 88 196 9.8E-22 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_06460 a4ac9f8743c44c547cb3f9328092d447 202 Gene3D G3DSA:1.10.260.40 13 86 9.1E-19 T 14-10-2018 C4901_06460 a4ac9f8743c44c547cb3f9328092d447 202 SUPERFAMILY SSF51182 86 196 2.6E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_02760 211affd1f136080132ef66f957f0aa1e 450 Pfam PF07282 Putative transposase DNA-binding domain 327 395 4.3E-16 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_14975 ed9e6581bb2bca259b5733e9a55a88ad 437 SUPERFAMILY SSF51569 2 280 1.9E-35 T 14-10-2018 C4901_14975 ed9e6581bb2bca259b5733e9a55a88ad 437 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 280 5.4E-42 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 C4901_14975 ed9e6581bb2bca259b5733e9a55a88ad 437 SMART SM00886 294 387 1.4E-8 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel C4901_14975 ed9e6581bb2bca259b5733e9a55a88ad 437 Pfam PF07876 Stress responsive A/B Barrel Domain 294 386 5.0E-7 T 14-10-2018 IPR013097 Stress responsive alpha-beta barrel C4901_14975 ed9e6581bb2bca259b5733e9a55a88ad 437 SUPERFAMILY SSF54909 296 388 2.47E-8 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C4901_14975 ed9e6581bb2bca259b5733e9a55a88ad 437 Gene3D G3DSA:3.20.20.70 1 289 2.4E-48 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_14975 ed9e6581bb2bca259b5733e9a55a88ad 437 Gene3D G3DSA:3.30.70.100 293 386 7.6E-7 T 14-10-2018 C4901_01965 d40ea4bfb64b25dbeff5b07ebfe33371 406 Pfam PF13635 Domain of unknown function (DUF4143) 196 355 1.1E-22 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 C4901_01965 d40ea4bfb64b25dbeff5b07ebfe33371 406 Pfam PF13173 AAA domain 18 133 6.6E-20 T 14-10-2018 C4901_01965 d40ea4bfb64b25dbeff5b07ebfe33371 406 SUPERFAMILY SSF52540 8 201 1.3E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 SMART SM00345 13 71 9.6E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 2.4E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.8E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 SMART SM00895 81 205 3.0E-7 T 14-10-2018 IPR011711 GntR, C-terminal C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 SUPERFAMILY SSF46785 10 75 7.71E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 Pfam PF07729 FCD domain 81 204 7.6E-18 T 14-10-2018 IPR011711 GntR, C-terminal C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 Gene3D G3DSA:1.10.10.10 9 72 1.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 Gene3D G3DSA:1.20.120.530 74 213 3.7E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C4901_13315 17ebd0233e365fbd0c63b57644fbc2ba 231 SUPERFAMILY SSF48008 77 210 2.25E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal C4901_13405 4491a63d7da255529de7e514dffd4497 901 Gene3D G3DSA:3.40.720.10 477 785 9.7E-9 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 C4901_13405 4491a63d7da255529de7e514dffd4497 901 SUPERFAMILY SSF51004 107 410 5.75E-22 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily C4901_13405 4491a63d7da255529de7e514dffd4497 901 Pfam PF04185 Phosphoesterase family 480 766 6.5E-7 T 14-10-2018 IPR007312 Phosphoesterase GO:0016788 C4901_13405 4491a63d7da255529de7e514dffd4497 901 Gene3D G3DSA:2.130.10.10 266 387 1.2E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_13405 4491a63d7da255529de7e514dffd4497 901 Gene3D G3DSA:2.130.10.10 107 265 8.9E-12 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_14575 ed3f8e0de98af274006656b01dc462f5 428 Gene3D G3DSA:3.20.20.140 57 368 1.1E-110 T 14-10-2018 C4901_14575 ed3f8e0de98af274006656b01dc462f5 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 43 423 1.6E-91 T 14-10-2018 C4901_14575 ed3f8e0de98af274006656b01dc462f5 428 SUPERFAMILY SSF51338 1 424 9.22E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_14575 ed3f8e0de98af274006656b01dc462f5 428 Gene3D G3DSA:2.30.40.10 9 420 1.1E-110 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_14575 ed3f8e0de98af274006656b01dc462f5 428 Pfam PF01979 Amidohydrolase family 243 420 3.9E-11 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C4901_14575 ed3f8e0de98af274006656b01dc462f5 428 SUPERFAMILY SSF51556 56 367 6.19E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase C4901_08790 31c86ca83e02ad3e4ce7209e8e9fa02d 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 186 1.3E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C4901_08790 31c86ca83e02ad3e4ce7209e8e9fa02d 194 PIRSF PIRSF006305 1 193 4.4E-42 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C4901_08790 31c86ca83e02ad3e4ce7209e8e9fa02d 194 SUPERFAMILY SSF52972 3 187 6.54E-56 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C4901_08790 31c86ca83e02ad3e4ce7209e8e9fa02d 194 Pfam PF02545 Maf-like protein 5 187 9.8E-42 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C4901_08790 31c86ca83e02ad3e4ce7209e8e9fa02d 194 Gene3D G3DSA:3.90.950.10 4 193 4.6E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C4901_08790 31c86ca83e02ad3e4ce7209e8e9fa02d 194 Hamap MF_00528 Septum formation protein Maf [maf]. 5 193 29.066 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C4901_03055 98eeee2e1c4e844e51f9a9c37aaefb9c 205 Gene3D G3DSA:3.30.460.10 98 186 3.5E-8 T 14-10-2018 C4901_03055 98eeee2e1c4e844e51f9a9c37aaefb9c 205 SUPERFAMILY SSF81301 109 193 2.09E-10 T 14-10-2018 C4901_03055 98eeee2e1c4e844e51f9a9c37aaefb9c 205 SUPERFAMILY SSF46785 7 79 1.96E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_03270 8af9ffad339d85a64a6285be4a54495c 649 Gene3D G3DSA:1.25.40.650 163 263 4.5E-11 T 14-10-2018 C4901_03270 8af9ffad339d85a64a6285be4a54495c 649 Pfam PF04348 LppC putative lipoprotein 58 621 1.2E-80 T 14-10-2018 IPR007443 Penicillin-binding protein activator LpoA C4901_03270 8af9ffad339d85a64a6285be4a54495c 649 Gene3D G3DSA:3.40.50.2300 275 614 1.1E-63 T 14-10-2018 C4901_03270 8af9ffad339d85a64a6285be4a54495c 649 SUPERFAMILY SSF53822 273 621 9.03E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I C4901_03270 8af9ffad339d85a64a6285be4a54495c 649 Gene3D G3DSA:3.40.50.2300 383 615 1.1E-63 T 14-10-2018 C4901_05075 6a37af52117a2f37b4557b40bda89a8a 408 SUPERFAMILY SSF54523 16 124 3.22E-5 T 14-10-2018 C4901_05075 6a37af52117a2f37b4557b40bda89a8a 408 Pfam PF16074 Type IV Pilus-assembly protein W 250 403 2.9E-12 T 14-10-2018 IPR032092 Type IV Pilus-assembly protein W GO:0043683 C4901_05075 6a37af52117a2f37b4557b40bda89a8a 408 Pfam PF07963 Prokaryotic N-terminal methylation motif 11 36 2.4E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_05075 6a37af52117a2f37b4557b40bda89a8a 408 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 36 1.6E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_11815 c7bbf06da325131b065110e8ae2ada42 200 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 140 173 2.2E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_11815 c7bbf06da325131b065110e8ae2ada42 200 Gene3D G3DSA:2.160.10.10 52 199 2.6E-24 T 14-10-2018 C4901_11815 c7bbf06da325131b065110e8ae2ada42 200 SUPERFAMILY SSF51161 77 195 1.18E-25 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_00915 ff612a79c1accff7c34342a5a05cdb6f 120 Gene3D G3DSA:3.30.2020.30 1 99 1.1E-28 T 14-10-2018 IPR038492 GBBH-like, N-terminal domain superfamily Reactome: R-HSA-71262 C4901_00915 ff612a79c1accff7c34342a5a05cdb6f 120 Pfam PF06155 Protein of unknown function (DUF971) 11 95 2.3E-29 T 14-10-2018 IPR010376 Gamma-butyrobetaine hydroxylase-like, N-terminal Reactome: R-HSA-71262 C4901_08075 adb247dab835e2a55748cc6ba4017ccf 660 Gene3D G3DSA:3.40.50.300 267 622 6.7E-108 T 14-10-2018 C4901_08075 adb247dab835e2a55748cc6ba4017ccf 660 Gene3D G3DSA:3.40.50.300 4 257 1.2E-78 T 14-10-2018 C4901_08075 adb247dab835e2a55748cc6ba4017ccf 660 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 2 657 35.042 T 14-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 C4901_08075 adb247dab835e2a55748cc6ba4017ccf 660 Pfam PF13361 UvrD-like helicase C-terminal domain 264 603 1.8E-59 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C4901_08075 adb247dab835e2a55748cc6ba4017ccf 660 Gene3D G3DSA:1.10.10.160 106 178 1.2E-78 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily C4901_08075 adb247dab835e2a55748cc6ba4017ccf 660 SUPERFAMILY SSF52540 2 626 5.43E-151 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08075 adb247dab835e2a55748cc6ba4017ccf 660 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 255 8.9E-61 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C4901_08075 adb247dab835e2a55748cc6ba4017ccf 660 Gene3D G3DSA:1.10.486.10 370 534 6.7E-108 T 14-10-2018 C4901_15480 da498294c04b652fa352ea8d8811fbdf 264 SUPERFAMILY SSF52096 7 211 1.29E-28 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily C4901_15480 da498294c04b652fa352ea8d8811fbdf 264 Gene3D G3DSA:3.90.226.10 13 215 1.3E-46 T 14-10-2018 C4901_15480 da498294c04b652fa352ea8d8811fbdf 264 Pfam PF01343 Peptidase family S49 74 218 1.1E-27 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 C4901_15480 da498294c04b652fa352ea8d8811fbdf 264 Gene3D G3DSA:3.40.1750.20 115 181 1.3E-46 T 14-10-2018 C4901_04435 1316be586833af3c8e9e2b6d3e177e22 144 Gene3D G3DSA:3.30.530.20 2 143 7.9E-40 T 14-10-2018 IPR023393 START-like domain superfamily C4901_04435 1316be586833af3c8e9e2b6d3e177e22 144 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 133 7.4E-31 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 C4901_04435 1316be586833af3c8e9e2b6d3e177e22 144 SUPERFAMILY SSF55961 3 143 8.04E-37 T 14-10-2018 C4901_02230 33344e9a5ca26a93b28adb96077d90dd 243 Pfam PF00072 Response regulator receiver domain 3 112 2.1E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_02230 33344e9a5ca26a93b28adb96077d90dd 243 Gene3D G3DSA:2.40.50.40 136 204 4.6E-9 T 14-10-2018 C4901_02230 33344e9a5ca26a93b28adb96077d90dd 243 Pfam PF04397 LytTr DNA-binding domain 146 240 8.5E-25 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 C4901_02230 33344e9a5ca26a93b28adb96077d90dd 243 Gene3D G3DSA:3.40.50.2300 1 131 1.1E-34 T 14-10-2018 C4901_02230 33344e9a5ca26a93b28adb96077d90dd 243 SUPERFAMILY SSF52172 1 138 2.85E-34 T 14-10-2018 IPR011006 CheY-like superfamily C4901_02230 33344e9a5ca26a93b28adb96077d90dd 243 SMART SM00448 1 112 3.8E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_02230 33344e9a5ca26a93b28adb96077d90dd 243 SMART SM00850 145 242 1.2E-27 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 SUPERFAMILY SSF53720 29 430 3.14E-78 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 8 430 39.238 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PIRSF PIRSF000099 4 431 1.2E-149 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 Gene3D G3DSA:3.40.50.1980 236 352 8.2E-117 T 14-10-2018 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 232 264 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 Gene3D G3DSA:3.40.50.1980 36 234 8.2E-117 T 14-10-2018 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 37 429 5.3E-150 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PRINTS PR00083 Histidinol dehydrogenase signature 173 199 4.1E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PRINTS PR00083 Histidinol dehydrogenase signature 323 348 4.1E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PRINTS PR00083 Histidinol dehydrogenase signature 203 228 4.1E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PRINTS PR00083 Histidinol dehydrogenase signature 140 166 4.1E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PRINTS PR00083 Histidinol dehydrogenase signature 254 273 4.1E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PRINTS PR00083 Histidinol dehydrogenase signature 232 253 4.1E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 4.1E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 PRINTS PR00083 Histidinol dehydrogenase signature 364 382 4.1E-80 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03140 adf8182bc735b50e10b9fdaf6e636c01 432 Pfam PF00815 Histidinol dehydrogenase 23 430 5.7E-159 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 C4901_03965 13ec98c3917648c4331be7dff7c7c72e 363 ProSitePatterns PS01215 Mrp family signature. 204 220 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 C4901_03965 13ec98c3917648c4331be7dff7c7c72e 363 Pfam PF01883 Iron-sulfur cluster assembly protein 8 79 5.4E-18 T 14-10-2018 IPR002744 MIP18 family-like C4901_03965 13ec98c3917648c4331be7dff7c7c72e 363 SUPERFAMILY SSF117916 2 82 1.5E-15 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C4901_03965 13ec98c3917648c4331be7dff7c7c72e 363 SUPERFAMILY SSF52540 100 347 1.38E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03965 13ec98c3917648c4331be7dff7c7c72e 363 Gene3D G3DSA:3.40.50.300 90 339 4.1E-83 T 14-10-2018 C4901_03965 13ec98c3917648c4331be7dff7c7c72e 363 Hamap MF_02040 Iron-sulfur cluster carrier protein. 93 341 37.409 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein C4901_03965 13ec98c3917648c4331be7dff7c7c72e 363 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 98 340 1.0E-101 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 C4901_03965 13ec98c3917648c4331be7dff7c7c72e 363 Gene3D G3DSA:3.30.300.130 2 89 5.2E-11 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily C4901_09880 d80bbbb61c339064d97e7902b7f72300 521 Pfam PF07690 Major Facilitator Superfamily 22 414 6.1E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_09880 d80bbbb61c339064d97e7902b7f72300 521 SUPERFAMILY SSF103473 20 498 3.4E-37 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 138 275 1.4E-19 T 14-10-2018 IPR000160 GGDEF domain C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 Gene3D G3DSA:3.20.20.450 284 539 5.3E-66 T 14-10-2018 IPR035919 EAL domain superfamily C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 Gene3D G3DSA:3.30.70.270 125 279 7.8E-32 T 14-10-2018 C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 Pfam PF00563 EAL domain 289 528 2.3E-53 T 14-10-2018 IPR001633 EAL domain C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 SMART SM00052 282 533 1.0E-46 T 14-10-2018 IPR001633 EAL domain C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 SMART SM00267 105 276 3.4E-16 T 14-10-2018 IPR000160 GGDEF domain C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 SUPERFAMILY SSF55073 128 275 1.02E-29 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 Pfam PF00990 Diguanylate cyclase, GGDEF domain 128 271 4.7E-22 T 14-10-2018 IPR000160 GGDEF domain C4901_08730 0487b9484909717d7fb09b5d75b2a1e8 544 SUPERFAMILY SSF141868 290 530 2.88E-58 T 14-10-2018 IPR035919 EAL domain superfamily C4901_10265 14910110db4b46eafd4120dbb49e1f4c 288 Pfam PF01163 RIO1 family 61 220 7.0E-37 T 14-10-2018 C4901_10265 14910110db4b46eafd4120dbb49e1f4c 288 SUPERFAMILY SSF56112 19 192 4.17E-17 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_10265 14910110db4b46eafd4120dbb49e1f4c 288 SMART SM00090 2 234 5.0E-14 T 14-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 C4901_10265 14910110db4b46eafd4120dbb49e1f4c 288 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 164 175 - T 14-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 C4901_10265 14910110db4b46eafd4120dbb49e1f4c 288 Gene3D G3DSA:1.10.510.10 140 221 5.0E-17 T 14-10-2018 C4901_10265 14910110db4b46eafd4120dbb49e1f4c 288 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 164 176 - T 14-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 7.2E-221 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 Gene3D G3DSA:3.30.499.20 4 286 5.6E-95 T 14-10-2018 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 1.2E-151 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 108 116 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 82 95 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 119 132 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 209 222 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 286 300 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 400 413 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 133 148 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 195 208 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 PRINTS PR00415 Aconitase family signature 343 354 2.7E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 Gene3D G3DSA:3.30.499.10 324 466 8.7E-47 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 58.218 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 C4901_08440 c68ceeef8afd096f1ec62cc8cfa285e4 467 SUPERFAMILY SSF53732 2 464 1.23E-161 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 C4901_10585 214758035c9f2b6ccd72fa07ffb9d55d 63 Pfam PF05532 CsbD-like 4 56 1.4E-17 T 14-10-2018 IPR008462 CsbD-like domain C4901_10585 214758035c9f2b6ccd72fa07ffb9d55d 63 SUPERFAMILY SSF69047 1 60 5.1E-20 T 14-10-2018 IPR036629 YjbJ superfamily C4901_10585 214758035c9f2b6ccd72fa07ffb9d55d 63 PIRSF PIRSF039008 1 62 1.4E-22 T 14-10-2018 IPR026042 Stress response protein YjbJ C4901_10585 214758035c9f2b6ccd72fa07ffb9d55d 63 Gene3D G3DSA:1.10.1470.10 1 62 6.6E-24 T 14-10-2018 IPR036629 YjbJ superfamily C4901_00840 2aad95ee6473e9ce89fe399de7badef7 192 SUPERFAMILY SSF52833 5 187 2.0E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_00840 2aad95ee6473e9ce89fe399de7badef7 192 Pfam PF13098 Thioredoxin-like domain 49 145 2.8E-7 T 14-10-2018 IPR012336 Thioredoxin-like fold C4901_00840 2aad95ee6473e9ce89fe399de7badef7 192 Gene3D G3DSA:3.40.30.10 47 191 1.2E-20 T 14-10-2018 C4901_06815 2f966a7573c747412f619afc2cf0f9ec 259 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 154 165 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_06815 2f966a7573c747412f619afc2cf0f9ec 259 Pfam PF13247 4Fe-4S dicluster domain 118 223 5.4E-17 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_06815 2f966a7573c747412f619afc2cf0f9ec 259 Gene3D G3DSA:3.30.70.20 128 192 3.9E-52 T 14-10-2018 C4901_06815 2f966a7573c747412f619afc2cf0f9ec 259 Gene3D G3DSA:3.30.70.20 64 256 3.9E-52 T 14-10-2018 C4901_06815 2f966a7573c747412f619afc2cf0f9ec 259 SUPERFAMILY SSF54862 62 257 3.87E-48 T 14-10-2018 C4901_03075 a34e6b612ad58bd82618e0c5101f550c 227 SUPERFAMILY SSF117396 17 87 3.01E-6 T 14-10-2018 IPR036520 UPF0759 superfamily C4901_06780 ac78ca3f01b8c39d80693730b8adab55 129 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 15 129 4.3E-39 T 14-10-2018 IPR017462 Sulphur relay, TusC/DsrF C4901_06780 ac78ca3f01b8c39d80693730b8adab55 129 SUPERFAMILY SSF75169 12 129 9.42E-38 T 14-10-2018 IPR027396 DsrEFH-like C4901_06780 ac78ca3f01b8c39d80693730b8adab55 129 Pfam PF02635 DsrE/DsrF-like family 13 129 1.4E-26 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_06780 ac78ca3f01b8c39d80693730b8adab55 129 Gene3D G3DSA:3.40.1260.10 10 129 9.2E-42 T 14-10-2018 IPR027396 DsrEFH-like C4901_16020 a4c5ed554fded78a63fc2dfec6415b5b 209 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 76 3.8E-21 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_16020 a4c5ed554fded78a63fc2dfec6415b5b 209 SUPERFAMILY SSF47616 69 201 9.61E-23 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C4901_16020 a4c5ed554fded78a63fc2dfec6415b5b 209 Pfam PF13410 Glutathione S-transferase, C-terminal domain 124 185 9.4E-9 T 14-10-2018 C4901_16020 a4c5ed554fded78a63fc2dfec6415b5b 209 Gene3D G3DSA:3.40.30.10 3 194 9.1E-62 T 14-10-2018 C4901_16020 a4c5ed554fded78a63fc2dfec6415b5b 209 Gene3D G3DSA:1.20.1050.10 78 190 9.1E-62 T 14-10-2018 C4901_16020 a4c5ed554fded78a63fc2dfec6415b5b 209 SUPERFAMILY SSF52833 1 94 2.04E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_07965 d738b02a4f840fc691c15e5bf9c55ab7 277 Gene3D G3DSA:3.10.50.40 138 266 1.2E-27 T 14-10-2018 C4901_07965 d738b02a4f840fc691c15e5bf9c55ab7 277 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 171 192 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 C4901_07965 d738b02a4f840fc691c15e5bf9c55ab7 277 Gene3D G3DSA:1.10.4030.30 36 93 9.1E-6 T 14-10-2018 C4901_07965 d738b02a4f840fc691c15e5bf9c55ab7 277 Pfam PF13624 SurA N-terminal domain 9 138 2.5E-8 T 14-10-2018 C4901_07965 d738b02a4f840fc691c15e5bf9c55ab7 277 SUPERFAMILY SSF54534 142 236 7.2E-26 T 14-10-2018 C4901_07965 d738b02a4f840fc691c15e5bf9c55ab7 277 Pfam PF13616 PPIC-type PPIASE domain 143 234 5.4E-20 T 14-10-2018 C4901_07965 d738b02a4f840fc691c15e5bf9c55ab7 277 SUPERFAMILY SSF109998 34 171 2.55E-15 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily C4901_04120 9f9b3140651152eb9bb0fbac6186fd19 273 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 52 267 35.084 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 C4901_04120 9f9b3140651152eb9bb0fbac6186fd19 273 SUPERFAMILY SSF53335 52 265 5.63E-52 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_04120 9f9b3140651152eb9bb0fbac6186fd19 273 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 52 267 5.0E-60 T 14-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 C4901_04120 9f9b3140651152eb9bb0fbac6186fd19 273 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 55 265 4.4E-68 T 14-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 C4901_04120 9f9b3140651152eb9bb0fbac6186fd19 273 PIRSF PIRSF023956 52 269 1.4E-65 T 14-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 C4901_04120 9f9b3140651152eb9bb0fbac6186fd19 273 Gene3D G3DSA:3.40.50.150 50 268 1.6E-59 T 14-10-2018 C4901_01780 3b454715408f610694d9fbd709ca6949 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 386 396 2.7E-16 T 14-10-2018 IPR001775 GspD/PilQ family C4901_01780 3b454715408f610694d9fbd709ca6949 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 654 668 2.7E-16 T 14-10-2018 IPR001775 GspD/PilQ family C4901_01780 3b454715408f610694d9fbd709ca6949 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 485 509 2.7E-16 T 14-10-2018 IPR001775 GspD/PilQ family C4901_01780 3b454715408f610694d9fbd709ca6949 689 PRINTS PR00811 Bacterial general secretion pathway protein D signature 631 649 2.7E-16 T 14-10-2018 IPR001775 GspD/PilQ family C4901_01780 3b454715408f610694d9fbd709ca6949 689 Pfam PF00263 Bacterial type II and III secretion system protein 490 667 1.4E-35 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C4901_01780 3b454715408f610694d9fbd709ca6949 689 Gene3D G3DSA:3.30.1370.130 198 258 6.8E-7 T 14-10-2018 C4901_01780 3b454715408f610694d9fbd709ca6949 689 Gene3D G3DSA:3.30.1370.120 197 276 6.8E-7 T 14-10-2018 IPR038591 NolW-like superfamily C4901_01780 3b454715408f610694d9fbd709ca6949 689 Pfam PF07655 Secretin N-terminal domain 269 357 1.7E-15 T 14-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 C4901_01780 3b454715408f610694d9fbd709ca6949 689 SMART SM00965 217 265 7.4E-4 T 14-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 C4901_01780 3b454715408f610694d9fbd709ca6949 689 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 612 645 - T 14-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 C4901_07020 85302c20438aee3b46aad287c24fca79 208 Gene3D G3DSA:3.40.50.150 7 201 1.2E-40 T 14-10-2018 C4901_07020 85302c20438aee3b46aad287c24fca79 208 SUPERFAMILY SSF53335 17 200 1.29E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_07020 85302c20438aee3b46aad287c24fca79 208 Pfam PF13649 Methyltransferase domain 54 143 1.6E-14 T 14-10-2018 C4901_15490 6db043944863c939815e3d52aa95d81a 289 SMART SM00052 38 289 4.7E-48 T 14-10-2018 IPR001633 EAL domain C4901_15490 6db043944863c939815e3d52aa95d81a 289 Pfam PF00563 EAL domain 45 286 8.9E-55 T 14-10-2018 IPR001633 EAL domain C4901_15490 6db043944863c939815e3d52aa95d81a 289 Gene3D G3DSA:3.20.20.450 43 289 2.4E-67 T 14-10-2018 IPR035919 EAL domain superfamily C4901_15490 6db043944863c939815e3d52aa95d81a 289 SUPERFAMILY SSF141868 45 286 1.7E-58 T 14-10-2018 IPR035919 EAL domain superfamily C4901_11865 07f4f8782b5aff61c827c10a228fcc62 461 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 20 461 5.8E-123 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase C4901_11865 07f4f8782b5aff61c827c10a228fcc62 461 TIGRFAM TIGR03013 EpsB_2: sugar transferase, PEP-CTERM system associated 20 461 4.1E-165 T 14-10-2018 IPR017464 Sugar transferase, PEP-CTERM system associated C4901_11865 07f4f8782b5aff61c827c10a228fcc62 461 Pfam PF02397 Bacterial sugar transferase 272 455 2.6E-65 T 14-10-2018 IPR003362 Bacterial sugar transferase C4901_00450 55e0865a23169f01aeef236a016795f5 819 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 802 819 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site C4901_00450 55e0865a23169f01aeef236a016795f5 819 SUPERFAMILY SSF56935 69 819 8.06E-65 T 14-10-2018 C4901_00450 55e0865a23169f01aeef236a016795f5 819 Gene3D G3DSA:2.40.170.20 213 819 1.3E-49 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C4901_00450 55e0865a23169f01aeef236a016795f5 819 Gene3D G3DSA:2.170.130.10 66 200 8.2E-8 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C4901_00450 55e0865a23169f01aeef236a016795f5 819 Pfam PF00593 TonB dependent receptor 312 817 9.1E-26 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C4901_12370 18b5a918b1cf2e2af32ea71b207e4294 245 Pfam PF04555 Restriction endonuclease XhoI 30 219 6.5E-91 T 14-10-2018 IPR007636 Restriction endonuclease, type II, XhoI GO:0003677|GO:0009036|GO:0009307 C4901_12370 18b5a918b1cf2e2af32ea71b207e4294 245 PIRSF PIRSF000994 1 245 1.3E-121 T 14-10-2018 IPR007636 Restriction endonuclease, type II, XhoI GO:0003677|GO:0009036|GO:0009307 C4901_16835 bdd3ff2583b0ccde76794e263f0a4576 555 SUPERFAMILY SSF52540 125 524 7.72E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16835 bdd3ff2583b0ccde76794e263f0a4576 555 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 405 494 5.9E-5 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain C4901_16835 bdd3ff2583b0ccde76794e263f0a4576 555 Gene3D G3DSA:3.40.50.300 369 535 4.4E-14 T 14-10-2018 C4901_16835 bdd3ff2583b0ccde76794e263f0a4576 555 Gene3D G3DSA:3.40.50.300 134 224 3.8E-8 T 14-10-2018 C4901_12060 a0ac970e3edc2373a5d4ca81ec277fff 222 TIGRFAM TIGR00017 cmk: cytidylate kinase 3 216 8.2E-72 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C4901_12060 a0ac970e3edc2373a5d4ca81ec277fff 222 Gene3D G3DSA:3.40.50.300 1 222 4.3E-73 T 14-10-2018 C4901_12060 a0ac970e3edc2373a5d4ca81ec277fff 222 SUPERFAMILY SSF52540 3 219 5.52E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12060 a0ac970e3edc2373a5d4ca81ec277fff 222 Hamap MF_00238 Cytidylate kinase [cmk]. 3 222 32.031 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C4901_12060 a0ac970e3edc2373a5d4ca81ec277fff 222 Pfam PF02224 Cytidylate kinase 6 219 3.4E-70 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 C4901_09070 1d8fb388fa7564cc0041c8ef67aa9251 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 14 37 2.0E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_09070 1d8fb388fa7564cc0041c8ef67aa9251 165 SUPERFAMILY SSF54523 17 99 1.1E-13 T 14-10-2018 C4901_09070 1d8fb388fa7564cc0041c8ef67aa9251 165 Gene3D G3DSA:3.30.700.10 17 165 7.2E-15 T 14-10-2018 C4901_09070 1d8fb388fa7564cc0041c8ef67aa9251 165 Pfam PF07963 Prokaryotic N-terminal methylation motif 13 37 1.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_09070 1d8fb388fa7564cc0041c8ef67aa9251 165 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 15 35 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_10835 96be278caed96b0cd8a302020361896d 113 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 91 2.1E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C4901_10835 96be278caed96b0cd8a302020361896d 113 PRINTS PR00355 Adrenodoxin signature 60 74 2.9E-9 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C4901_10835 96be278caed96b0cd8a302020361896d 113 PRINTS PR00355 Adrenodoxin signature 42 52 2.9E-9 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C4901_10835 96be278caed96b0cd8a302020361896d 113 PRINTS PR00355 Adrenodoxin signature 83 91 2.9E-9 T 14-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C4901_10835 96be278caed96b0cd8a302020361896d 113 Gene3D G3DSA:3.10.20.30 1 113 1.5E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_10835 96be278caed96b0cd8a302020361896d 113 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 2.3E-47 T 14-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 C4901_10835 96be278caed96b0cd8a302020361896d 113 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 14-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 C4901_10835 96be278caed96b0cd8a302020361896d 113 SUPERFAMILY SSF54292 6 105 4.99E-29 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_01620 5250f903e25ce9e7bd81115bf0416742 296 Pfam PF02470 MlaD protein 38 112 3.7E-10 T 14-10-2018 IPR003399 Mce/MlaD C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 Gene3D G3DSA:3.30.70.2740 336 417 2.0E-17 T 14-10-2018 C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 SUPERFAMILY SSF55103 221 459 1.03E-66 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 Gene3D G3DSA:3.30.465.10 96 217 6.7E-41 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 SUPERFAMILY SSF56176 7 216 1.82E-69 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 Gene3D G3DSA:1.10.45.10 418 457 1.4E-12 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 Gene3D G3DSA:3.30.70.2190 219 332 1.3E-5 T 14-10-2018 C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 Pfam PF02913 FAD linked oxidases, C-terminal domain 219 457 3.0E-66 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 Gene3D G3DSA:3.30.43.10 2 94 1.7E-24 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 C4901_03250 cf260f898667e6f9927ff6eda75e6451 462 Pfam PF01565 FAD binding domain 42 180 5.0E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C4901_05150 9ccd024a35db0e0ae47eeb88bd85348c 135 PIRSF PIRSF016498 13 130 5.5E-12 T 14-10-2018 IPR018699 Protein of unknown function DUF2203 C4901_05150 9ccd024a35db0e0ae47eeb88bd85348c 135 Pfam PF09969 Uncharacterized conserved protein (DUF2203) 15 122 4.9E-19 T 14-10-2018 IPR018699 Protein of unknown function DUF2203 C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 PRINTS PR00474 Glutamate 5-kinase family signature 54 68 2.9E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 PRINTS PR00474 Glutamate 5-kinase family signature 242 262 2.9E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 PRINTS PR00474 Glutamate 5-kinase family signature 192 219 2.9E-8 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 TIGRFAM TIGR00761 argB: acetylglutamate kinase 24 267 8.0E-72 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 PIRSF PIRSF000728 8 292 7.2E-105 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 SUPERFAMILY SSF53633 5 291 1.96E-90 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 Gene3D G3DSA:3.40.1160.10 3 292 1.3E-94 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 Pfam PF00696 Amino acid kinase family 23 269 3.6E-40 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 C4901_02350 a4e456f7b3ee77f0e1551d0a8a8b3891 292 Hamap MF_00082 Acetylglutamate kinase [argB]. 22 285 50.412 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C4901_00905 941de1aaae2aa3b311e6fcc15a4fb3c5 164 Pfam PF06271 RDD family 21 151 1.9E-21 T 14-10-2018 IPR010432 RDD C4901_02865 3620cd2db30465301106830381b3f0f4 189 Hamap MF_00528 Septum formation protein Maf [maf]. 1 189 27.919 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C4901_02865 3620cd2db30465301106830381b3f0f4 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 183 6.7E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C4901_02865 3620cd2db30465301106830381b3f0f4 189 SUPERFAMILY SSF52972 2 183 5.89E-54 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C4901_02865 3620cd2db30465301106830381b3f0f4 189 PIRSF PIRSF006305 1 188 2.4E-47 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C4901_02865 3620cd2db30465301106830381b3f0f4 189 Pfam PF02545 Maf-like protein 2 184 1.6E-50 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 C4901_02865 3620cd2db30465301106830381b3f0f4 189 Gene3D G3DSA:3.90.950.10 1 187 2.1E-61 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C4901_08960 93bc21a08349dfacbceffd4bb26459d0 567 SUPERFAMILY SSF53067 3 344 2.07E-10 T 14-10-2018 C4901_08960 93bc21a08349dfacbceffd4bb26459d0 567 Gene3D G3DSA:3.30.420.350 139 334 1.1E-64 T 14-10-2018 C4901_08960 93bc21a08349dfacbceffd4bb26459d0 567 Gene3D G3DSA:3.90.870.20 356 559 2.9E-57 T 14-10-2018 IPR038152 Carbamoyltransferase, C-terminal domain superfamily C4901_08960 93bc21a08349dfacbceffd4bb26459d0 567 Pfam PF16861 Carbamoyltransferase C-terminus 392 560 9.3E-44 T 14-10-2018 IPR031730 Carbamoyltransferase, C-terminal C4901_08960 93bc21a08349dfacbceffd4bb26459d0 567 Pfam PF02543 Carbamoyltransferase N-terminus 3 341 1.2E-45 T 14-10-2018 IPR003696 Carbamoyltransferase GO:0003824|GO:0009058 C4901_08960 93bc21a08349dfacbceffd4bb26459d0 567 Gene3D G3DSA:3.30.420.40 10 341 1.1E-64 T 14-10-2018 C4901_08445 3378872e62108d01843f67e2dedd1a17 217 Gene3D G3DSA:3.20.19.10 1 183 2.3E-72 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 C4901_08445 3378872e62108d01843f67e2dedd1a17 217 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 209 43.153 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 C4901_08445 3378872e62108d01843f67e2dedd1a17 217 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 2 195 2.5E-79 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 C4901_08445 3378872e62108d01843f67e2dedd1a17 217 Pfam PF00694 Aconitase C-terminal domain 2 131 5.7E-40 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 C4901_08445 3378872e62108d01843f67e2dedd1a17 217 SUPERFAMILY SSF52016 4 204 3.73E-58 T 14-10-2018 C4901_11830 e9d200d47c9895af2a274332d5ed2b46 537 SUPERFAMILY SSF56801 3 511 1.96E-152 T 14-10-2018 C4901_11830 e9d200d47c9895af2a274332d5ed2b46 537 Pfam PF13193 AMP-binding enzyme C-terminal domain 425 500 1.7E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C4901_11830 e9d200d47c9895af2a274332d5ed2b46 537 Gene3D G3DSA:3.40.50.12780 1 409 2.3E-123 T 14-10-2018 C4901_11830 e9d200d47c9895af2a274332d5ed2b46 537 ProSitePatterns PS00455 Putative AMP-binding domain signature. 163 174 - T 14-10-2018 IPR020845 AMP-binding, conserved site C4901_11830 e9d200d47c9895af2a274332d5ed2b46 537 Gene3D G3DSA:3.30.300.30 410 523 4.2E-29 T 14-10-2018 C4901_11830 e9d200d47c9895af2a274332d5ed2b46 537 Pfam PF00501 AMP-binding enzyme 10 417 2.2E-109 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C4901_07465 731295f045da05959eb82110106b77d0 248 SUPERFAMILY SSF52540 61 236 7.76E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07465 731295f045da05959eb82110106b77d0 248 Gene3D G3DSA:3.40.50.300 59 240 3.9E-40 T 14-10-2018 C4901_07465 731295f045da05959eb82110106b77d0 248 Pfam PF01695 IstB-like ATP binding protein 53 227 1.1E-60 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C4901_07465 731295f045da05959eb82110106b77d0 248 SMART SM00382 95 228 0.0037 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_02100 280cf6e4be5ad7a31542be24d4874b9d 221 SUPERFAMILY SSF53335 4 166 6.09E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_02100 280cf6e4be5ad7a31542be24d4874b9d 221 Gene3D G3DSA:3.40.50.150 3 167 2.0E-10 T 14-10-2018 C4901_02100 280cf6e4be5ad7a31542be24d4874b9d 221 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 88 94 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C4901_07915 7629c5b828337a2710055867379d8da9 775 SUPERFAMILY SSF81660 308 436 6.21E-10 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 Pfam PF00702 haloacid dehalogenase-like hydrolase 292 527 4.6E-26 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 Gene3D G3DSA:3.40.1110.10 309 426 1.9E-18 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 50 1.3E-12 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 545 570 3.1E-9 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 397 415 3.1E-9 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 675 696 3.1E-9 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 292 306 2.8E-39 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 426 437 2.8E-39 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 549 2.8E-39 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 448 458 2.8E-39 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 143 157 2.8E-39 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 514 533 2.8E-39 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 Pfam PF00122 E1-E2 ATPase 97 271 4.3E-42 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 Gene3D G3DSA:3.40.50.1000 427 482 2.2E-8 T 14-10-2018 IPR023214 HAD superfamily C4901_07915 7629c5b828337a2710055867379d8da9 775 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 485 603 2.3E-27 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 66 472 2.3E-58 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 Gene3D G3DSA:1.20.1110.10 36 99 1.4E-8 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 Gene3D G3DSA:1.20.1110.10 483 754 1.0E-45 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 Gene3D G3DSA:2.60.120.1500 100 187 1.8E-28 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 Gene3D G3DSA:1.20.1110.10 188 308 4.0E-10 T 14-10-2018 C4901_07915 7629c5b828337a2710055867379d8da9 775 TIGRFAM TIGR01647 ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 6 720 1.2E-198 T 14-10-2018 IPR006534 P-type ATPase, subfamily IIIA GO:0008553|GO:0016021|GO:0120029 KEGG: 00190+3.6.3.6 C4901_07915 7629c5b828337a2710055867379d8da9 775 SUPERFAMILY SSF81653 97 193 7.98E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 SMART SM00831 1 59 1.4E-4 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 SUPERFAMILY SSF56784 291 603 1.42E-42 T 14-10-2018 IPR036412 HAD-like superfamily C4901_07915 7629c5b828337a2710055867379d8da9 775 SUPERFAMILY SSF81665 3 759 4.18E-71 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 C4901_07915 7629c5b828337a2710055867379d8da9 775 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 294 300 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 C4901_02840 7626528bc7a5be94891175d184f4881d 334 SUPERFAMILY SSF52540 10 183 4.3E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02840 7626528bc7a5be94891175d184f4881d 334 Pfam PF06144 DNA polymerase III, delta subunit 19 184 1.6E-14 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 C4901_02840 7626528bc7a5be94891175d184f4881d 334 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 324 1.2E-55 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 C4901_02840 7626528bc7a5be94891175d184f4881d 334 Gene3D G3DSA:3.40.50.300 1 135 4.1E-29 T 14-10-2018 C4901_02840 7626528bc7a5be94891175d184f4881d 334 SUPERFAMILY SSF48019 204 328 1.14E-23 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 C4901_02840 7626528bc7a5be94891175d184f4881d 334 Gene3D G3DSA:1.20.272.10 207 331 3.6E-29 T 14-10-2018 C4901_02840 7626528bc7a5be94891175d184f4881d 334 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 208 325 5.9E-11 T 14-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 C4901_09260 fcc3bb57d65f6126e770395a062595a5 652 Pfam PF13604 AAA domain 398 460 6.5E-8 T 14-10-2018 C4901_09260 fcc3bb57d65f6126e770395a062595a5 652 Gene3D G3DSA:3.40.50.300 385 592 4.5E-16 T 14-10-2018 C4901_09260 fcc3bb57d65f6126e770395a062595a5 652 SUPERFAMILY SSF52540 358 468 3.48E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_06465 37493d7fdb28585a75f62799662d3777 202 SUPERFAMILY SSF140931 3 147 9.94E-27 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_06465 37493d7fdb28585a75f62799662d3777 202 Pfam PF02661 Fic/DOC family 2 110 2.3E-15 T 14-10-2018 IPR003812 Fido domain C4901_06465 37493d7fdb28585a75f62799662d3777 202 Gene3D G3DSA:1.10.3290.10 1 147 1.0E-32 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_08135 7d50e4a5294d34f6aa288285c8a32b99 238 Gene3D G3DSA:1.10.246.40 13 77 1.7E-6 T 14-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily C4901_08135 7d50e4a5294d34f6aa288285c8a32b99 238 Pfam PF14706 Transposase DNA-binding 20 77 2.0E-11 T 14-10-2018 IPR014735 Transposase, Tn5-like, N-terminal C4901_08135 7d50e4a5294d34f6aa288285c8a32b99 238 Gene3D G3DSA:3.90.350.10 79 216 1.0E-22 T 14-10-2018 IPR014736 Transposase, Tn5-like, core C4901_08135 7d50e4a5294d34f6aa288285c8a32b99 238 SUPERFAMILY SSF53098 17 211 5.23E-31 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_04295 84197150432858b40d91498ebae83547 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 3.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_04295 84197150432858b40d91498ebae83547 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 3.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_04295 84197150432858b40d91498ebae83547 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 3.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_04295 84197150432858b40d91498ebae83547 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 3.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_04295 84197150432858b40d91498ebae83547 142 Gene3D G3DSA:1.10.10.10 4 142 8.7E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_04295 84197150432858b40d91498ebae83547 142 SMART SM00347 25 125 7.7E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_04295 84197150432858b40d91498ebae83547 142 SUPERFAMILY SSF46785 8 139 7.06E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_04295 84197150432858b40d91498ebae83547 142 Pfam PF12802 MarR family 30 89 1.9E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 C4901_13250 e3558f884bf89c0177d6e57809fda6ab 130 SUPERFAMILY SSF103247 5 127 6.67E-24 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_13250 e3558f884bf89c0177d6e57809fda6ab 130 Pfam PF03625 Domain of unknown function DUF302 39 97 2.4E-7 T 14-10-2018 IPR005180 Domain of unknown function DUF302 C4901_13250 e3558f884bf89c0177d6e57809fda6ab 130 Gene3D G3DSA:3.30.310.70 6 127 3.5E-15 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_06895 573f0e351acc4558567e2dd185c438ed 91 Gene3D G3DSA:1.20.5.780 1 91 1.3E-20 T 14-10-2018 C4901_06895 573f0e351acc4558567e2dd185c438ed 91 Pfam PF08681 Protein of unknown function (DUF1778) 10 87 5.9E-23 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 C4901_06895 573f0e351acc4558567e2dd185c438ed 91 SUPERFAMILY SSF47598 7 84 1.49E-17 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_05475 f75d5a5c250d52b203504eda07f5c3e7 339 Pfam PF06481 COX Aromatic Rich Motif 274 316 5.8E-7 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 C4901_05475 f75d5a5c250d52b203504eda07f5c3e7 339 Gene3D G3DSA:2.60.40.420 145 314 6.9E-45 T 14-10-2018 IPR008972 Cupredoxin C4901_05475 f75d5a5c250d52b203504eda07f5c3e7 339 Gene3D G3DSA:1.10.287.90 30 114 5.9E-19 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05475 f75d5a5c250d52b203504eda07f5c3e7 339 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 182 254 5.9E-9 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_05475 f75d5a5c250d52b203504eda07f5c3e7 339 SUPERFAMILY SSF49503 155 313 4.4E-39 T 14-10-2018 IPR008972 Cupredoxin C4901_05475 f75d5a5c250d52b203504eda07f5c3e7 339 SUPERFAMILY SSF81464 29 117 3.27E-12 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_03360 4a1b2b74a6be70daf3c2332b43c8a919 312 SUPERFAMILY SSF53335 5 308 3.96E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_03360 4a1b2b74a6be70daf3c2332b43c8a919 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 5 308 37.185 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C4901_03360 4a1b2b74a6be70daf3c2332b43c8a919 312 SUPERFAMILY SSF81799 114 213 1.31E-31 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 C4901_03360 4a1b2b74a6be70daf3c2332b43c8a919 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 5 307 1.6E-102 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C4901_03360 4a1b2b74a6be70daf3c2332b43c8a919 312 Gene3D G3DSA:1.10.150.170 112 214 6.1E-100 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 C4901_03360 4a1b2b74a6be70daf3c2332b43c8a919 312 PIRSF PIRSF004486 1 309 7.5E-97 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C4901_03360 4a1b2b74a6be70daf3c2332b43c8a919 312 Pfam PF01795 MraW methylase family 5 307 4.9E-104 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 C4901_03360 4a1b2b74a6be70daf3c2332b43c8a919 312 Gene3D G3DSA:3.40.50.150 8 307 6.1E-100 T 14-10-2018 C4901_16520 5dd5c252e19d2dbd4a91ed2a8f0e2339 202 SUPERFAMILY SSF47616 87 199 6.4E-28 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily C4901_16520 5dd5c252e19d2dbd4a91ed2a8f0e2339 202 SUPERFAMILY SSF52833 1 77 2.61E-17 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_16520 5dd5c252e19d2dbd4a91ed2a8f0e2339 202 Gene3D G3DSA:3.40.30.10 3 193 1.4E-67 T 14-10-2018 C4901_16520 5dd5c252e19d2dbd4a91ed2a8f0e2339 202 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 75 9.1E-9 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_16520 5dd5c252e19d2dbd4a91ed2a8f0e2339 202 Gene3D G3DSA:1.20.1050.10 82 188 1.4E-67 T 14-10-2018 C4901_16520 5dd5c252e19d2dbd4a91ed2a8f0e2339 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 103 189 2.2E-11 T 14-10-2018 IPR004046 Glutathione S-transferase, C-terminal C4901_14370 845e599c119a93be767f571823c84298 136 SUPERFAMILY SSF54593 13 129 3.09E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_14370 845e599c119a93be767f571823c84298 136 Gene3D G3DSA:3.10.180.10 1 125 5.9E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_14370 845e599c119a93be767f571823c84298 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 123 1.6E-16 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C4901_01285 1ec9252f0b95896460cb986a3bcef334 222 TIGRFAM TIGR04038 tatD_link_rSAM: radical SAM protein, TatD family-associated 20 211 1.1E-60 T 14-10-2018 IPR023821 Radical SAM, TatD-associated C4901_01285 1ec9252f0b95896460cb986a3bcef334 222 Pfam PF04055 Radical SAM superfamily 30 193 1.7E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_01285 1ec9252f0b95896460cb986a3bcef334 222 SUPERFAMILY SSF102114 25 185 2.75E-22 T 14-10-2018 C4901_01285 1ec9252f0b95896460cb986a3bcef334 222 Gene3D G3DSA:3.20.20.70 22 220 1.4E-18 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_14995 acdd6060edeb308fdc45ac47c11e4b74 184 Pfam PF03029 Conserved hypothetical ATP binding protein 26 87 2.4E-7 T 14-10-2018 IPR004130 GPN-loop GTPase C4901_14995 acdd6060edeb308fdc45ac47c11e4b74 184 SUPERFAMILY SSF52540 2 162 1.46E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14995 acdd6060edeb308fdc45ac47c11e4b74 184 Gene3D G3DSA:3.40.50.300 1 166 8.6E-16 T 14-10-2018 C4901_09775 52f0f19e2f35129b7fa3933620a63023 231 Pfam PF11740 Plasmid replication region DNA-binding N-term 16 127 9.6E-22 T 14-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain C4901_09775 52f0f19e2f35129b7fa3933620a63023 231 Gene3D G3DSA:1.20.5.340 69 185 1.5E-8 T 14-10-2018 C4901_09775 52f0f19e2f35129b7fa3933620a63023 231 SUPERFAMILY SSF90257 96 193 2.88E-6 T 14-10-2018 C4901_00260 62b156c14fad62d965243e3506fea20d 190 SUPERFAMILY SSF52499 2 182 4.45E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C4901_00260 62b156c14fad62d965243e3506fea20d 190 Pfam PF00857 Isochorismatase family 8 158 1.6E-28 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 C4901_00260 62b156c14fad62d965243e3506fea20d 190 Gene3D G3DSA:3.40.50.850 2 185 5.5E-54 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C4901_06185 411e14730d0668095e4c2347c3bcead2 563 PRINTS PR00762 Chloride channel signature 333 353 1.9E-10 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_06185 411e14730d0668095e4c2347c3bcead2 563 PRINTS PR00762 Chloride channel signature 366 382 1.9E-10 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_06185 411e14730d0668095e4c2347c3bcead2 563 PRINTS PR00762 Chloride channel signature 121 140 1.9E-10 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_06185 411e14730d0668095e4c2347c3bcead2 563 PRINTS PR00762 Chloride channel signature 384 403 1.9E-10 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_06185 411e14730d0668095e4c2347c3bcead2 563 Gene3D G3DSA:1.10.3080.10 25 440 5.2E-72 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 C4901_06185 411e14730d0668095e4c2347c3bcead2 563 Pfam PF00654 Voltage gated chloride channel 80 417 1.9E-64 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_06185 411e14730d0668095e4c2347c3bcead2 563 SUPERFAMILY SSF81340 20 429 8.11E-74 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 C4901_06400 11dae88d68ef62b5c59d9f2066020deb 404 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 3.2E-8 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated C4901_06400 11dae88d68ef62b5c59d9f2066020deb 404 Gene3D G3DSA:3.90.180.10 4 390 1.8E-110 T 14-10-2018 C4901_06400 11dae88d68ef62b5c59d9f2066020deb 404 Gene3D G3DSA:3.40.50.720 169 362 1.8E-110 T 14-10-2018 C4901_06400 11dae88d68ef62b5c59d9f2066020deb 404 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C4901_06400 11dae88d68ef62b5c59d9f2066020deb 404 Pfam PF00107 Zinc-binding dehydrogenase 189 260 1.1E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C4901_06400 11dae88d68ef62b5c59d9f2066020deb 404 SUPERFAMILY SSF50129 1 195 5.02E-55 T 14-10-2018 IPR011032 GroES-like superfamily C4901_06400 11dae88d68ef62b5c59d9f2066020deb 404 SUPERFAMILY SSF51735 156 363 3.16E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_06400 11dae88d68ef62b5c59d9f2066020deb 404 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 143 9.2E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C4901_10950 77c83641e4daf5861e99b52d27298321 251 Pfam PF10615 Protein of unknown function (DUF2470) 169 234 2.3E-15 T 14-10-2018 IPR019595 Domain of unknown function DUF2470 C4901_10950 77c83641e4daf5861e99b52d27298321 251 Gene3D G3DSA:2.30.110.10 1 151 1.3E-45 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 C4901_10950 77c83641e4daf5861e99b52d27298321 251 Gene3D G3DSA:3.20.180.10 156 238 3.7E-24 T 14-10-2018 IPR037119 Haem oxygenase HugZ-like superfamily C4901_10950 77c83641e4daf5861e99b52d27298321 251 SUPERFAMILY SSF50475 10 237 1.65E-53 T 14-10-2018 C4901_10950 77c83641e4daf5861e99b52d27298321 251 Pfam PF13883 Pyridoxamine 5'-phosphate oxidase 7 150 4.2E-19 T 14-10-2018 C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 Pfam PF02540 NAD synthase 261 509 1.1E-68 T 14-10-2018 IPR022310 NAD/GMP synthase C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 SUPERFAMILY SSF56317 2 242 5.49E-62 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 2 534 27.859 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 34 49 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 Gene3D G3DSA:3.60.110.10 1 254 6.6E-90 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 PIRSF PIRSF006630 1 244 2.6E-75 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 PIRSF PIRSF006630 240 535 8.4E-103 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 Gene3D G3DSA:3.40.50.620 259 535 4.2E-103 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 Pfam PF00795 Carbon-nitrogen hydrolase 3 242 1.1E-26 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 TIGRFAM TIGR00552 nadE: NAD+ synthetase 268 513 6.7E-57 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 C4901_08355 0b7dbcfe943f0df3755479dbcb09b832 537 SUPERFAMILY SSF52402 249 517 2.87E-70 T 14-10-2018 C4901_00390 8a6a8ab92b0ef33e47c3500f26a2b00d 221 SUPERFAMILY SSF52540 6 142 2.21E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00390 8a6a8ab92b0ef33e47c3500f26a2b00d 221 Gene3D G3DSA:3.40.50.300 1 204 3.3E-24 T 14-10-2018 C4901_00390 8a6a8ab92b0ef33e47c3500f26a2b00d 221 Pfam PF13671 AAA domain 9 139 3.9E-9 T 14-10-2018 C4901_16105 575e0af4a6ce14035f42f21cae063f12 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 2 193 3.4E-52 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 C4901_16105 575e0af4a6ce14035f42f21cae063f12 197 Gene3D G3DSA:3.90.950.10 1 196 2.0E-71 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C4901_16105 575e0af4a6ce14035f42f21cae063f12 197 SUPERFAMILY SSF52972 2 193 4.97E-65 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like C4901_16105 575e0af4a6ce14035f42f21cae063f12 197 Pfam PF01725 Ham1 family 3 190 3.8E-51 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 C4901_16105 575e0af4a6ce14035f42f21cae063f12 197 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 195 46.225 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 C4901_16730 05b189e762d2b52a62044c1bd71b5aa8 309 Gene3D G3DSA:3.40.190.10 143 243 9.5E-29 T 14-10-2018 C4901_16730 05b189e762d2b52a62044c1bd71b5aa8 309 Gene3D G3DSA:3.40.190.10 65 275 9.5E-29 T 14-10-2018 C4901_16730 05b189e762d2b52a62044c1bd71b5aa8 309 SUPERFAMILY SSF53850 63 298 2.95E-17 T 14-10-2018 C4901_16730 05b189e762d2b52a62044c1bd71b5aa8 309 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 65 294 5.0E-44 T 14-10-2018 C4901_06425 8c201c16a4624dd89a9a4206f804b37b 232 SUPERFAMILY SSF69336 5 199 4.32E-37 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 C4901_06425 8c201c16a4624dd89a9a4206f804b37b 232 PIRSF PIRSF006519 1 228 5.7E-62 T 14-10-2018 IPR012061 Glutamate synthase, large subunit domain 3 stand-alone protein C4901_06425 8c201c16a4624dd89a9a4206f804b37b 232 Pfam PF01493 GXGXG motif 40 171 1.8E-10 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 C4901_06425 8c201c16a4624dd89a9a4206f804b37b 232 Gene3D G3DSA:2.160.20.60 22 206 1.6E-12 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 C4901_00605 bff6423aff18483b58f3f92b2e4438c9 257 Gene3D G3DSA:3.90.550.10 5 242 1.2E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_00605 bff6423aff18483b58f3f92b2e4438c9 257 SUPERFAMILY SSF53448 10 243 7.31E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_00605 bff6423aff18483b58f3f92b2e4438c9 257 Pfam PF00535 Glycosyl transferase family 2 10 138 1.2E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_03260 68c72f7a59d430533ef543c749b7e132 199 Pfam PF04972 BON domain 130 192 3.3E-7 T 14-10-2018 IPR007055 BON domain C4901_03260 68c72f7a59d430533ef543c749b7e132 199 Pfam PF04972 BON domain 51 119 2.7E-11 T 14-10-2018 IPR007055 BON domain C4901_03260 68c72f7a59d430533ef543c749b7e132 199 SMART SM00749 134 196 0.62 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria C4901_03260 68c72f7a59d430533ef543c749b7e132 199 SMART SM00749 56 120 40.0 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria C4901_13980 c93cc671abe78844d360e5c46d5dc575 258 Gene3D G3DSA:3.90.550.10 1 249 3.2E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_13980 c93cc671abe78844d360e5c46d5dc575 258 Pfam PF00535 Glycosyl transferase family 2 2 136 2.1E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_13980 c93cc671abe78844d360e5c46d5dc575 258 SUPERFAMILY SSF53448 1 238 2.44E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_14740 03d6aa79c12a22775d19807f4744b894 518 SUPERFAMILY SSF53807 3 517 2.98E-171 T 14-10-2018 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 Gene3D G3DSA:1.20.89.10 323 518 6.4E-86 T 14-10-2018 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 ProSitePatterns PS00699 Nitrogenases component 1 alpha and beta subunits signature 1. 87 94 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 TIGRFAM TIGR01286 nifK: nitrogenase molybdenum-iron protein beta chain 2 518 3.6E-252 T 14-10-2018 IPR005976 Nitrogenase molybdenum-iron protein beta chain GO:0009399|GO:0016163|GO:0016612|GO:0055114 KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 Pfam PF11844 Domain of unknown function (DUF3364) 1 55 2.1E-23 T 14-10-2018 IPR024564 Nitrogenase molybdenum-iron protein beta chain, N-terminal KEGG: 00625+1.18.6.1|KEGG: 00910+1.18.6.1 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 Gene3D G3DSA:3.40.50.1980 69 211 7.9E-45 T 14-10-2018 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 Gene3D G3DSA:3.40.50.1980 220 322 3.7E-27 T 14-10-2018 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 Gene3D G3DSA:3.40.50.1980 367 479 6.4E-86 T 14-10-2018 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 Pfam PF00148 Nitrogenase component 1 type Oxidoreductase 69 494 2.7E-117 T 14-10-2018 IPR000510 Nitrogenase/oxidoreductase, component 1 GO:0016491|GO:0055114 C4901_14740 03d6aa79c12a22775d19807f4744b894 518 ProSitePatterns PS00090 Nitrogenases component 1 alpha and beta subunits signature 2. 150 164 - T 14-10-2018 IPR000318 Nitrogenase component 1, conserved site GO:0009399|GO:0016163 C4901_12930 361a8c44db2e4a0f2721a8c6be4a23bf 362 SUPERFAMILY SSF55681 4 250 1.07E-62 T 14-10-2018 C4901_12930 361a8c44db2e4a0f2721a8c6be4a23bf 362 Gene3D G3DSA:3.30.390.50 258 346 2.1E-21 T 14-10-2018 C4901_12930 361a8c44db2e4a0f2721a8c6be4a23bf 362 Gene3D G3DSA:3.30.930.10 4 256 1.2E-57 T 14-10-2018 C4901_08575 8381224b0f67860839e9c12a049911f4 653 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 20 596 1.0E-184 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_08575 8381224b0f67860839e9c12a049911f4 653 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 602 1.6E-68 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C4901_08575 8381224b0f67860839e9c12a049911f4 653 Gene3D G3DSA:3.40.710.10 245 607 8.2E-91 T 14-10-2018 C4901_08575 8381224b0f67860839e9c12a049911f4 653 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 234 3.5E-31 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 C4901_08575 8381224b0f67860839e9c12a049911f4 653 SUPERFAMILY SSF56601 249 604 1.05E-90 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C4901_08575 8381224b0f67860839e9c12a049911f4 653 SUPERFAMILY SSF56519 56 248 1.57E-40 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 C4901_08575 8381224b0f67860839e9c12a049911f4 653 Gene3D G3DSA:3.90.1310.30 57 244 2.9E-34 T 14-10-2018 C4901_13715 8c50521ccf4d2f65ca591f9c8c2976d1 150 Gene3D G3DSA:3.40.50.300 27 130 8.4E-18 T 14-10-2018 C4901_13715 8c50521ccf4d2f65ca591f9c8c2976d1 150 Pfam PF01695 IstB-like ATP binding protein 24 128 8.7E-22 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C4901_13715 8c50521ccf4d2f65ca591f9c8c2976d1 150 SUPERFAMILY SSF52540 43 123 2.71E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 4.6E-65 T 14-10-2018 C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 SUPERFAMILY SSF51735 7 246 1.94E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 Gene3D G3DSA:3.40.50.720 1 247 7.2E-83 T 14-10-2018 C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 185 1.8E-5 T 14-10-2018 C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 245 1.8E-97 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08835 8183c85230169b348ab69d5d6ff0958e 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 8.2E-6 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 8.2E-6 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 8.7E-85 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 Pfam PF00117 Glutamine amidotransferase class-I 4 186 7.7E-55 T 14-10-2018 IPR017926 Glutamine amidotransferase C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 SUPERFAMILY SSF52317 1 187 1.26E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00097 Anthranilate synthase component II signature 74 85 2.0E-37 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.0E-37 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00097 Anthranilate synthase component II signature 119 131 2.0E-37 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.0E-37 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00097 Anthranilate synthase component II signature 99 107 2.0E-37 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00097 Anthranilate synthase component II signature 47 56 2.0E-37 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 8.2E-14 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 8.2E-14 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 8.2E-14 T 14-10-2018 C4901_14390 f0cb444e1964e310fc463d76b75ff156 191 Gene3D G3DSA:3.40.50.880 1 187 2.0E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_06415 e8ce96777b801593c9151286d2f5f77c 471 Gene3D G3DSA:1.20.1740.10 12 462 4.8E-47 T 14-10-2018 C4901_06415 e8ce96777b801593c9151286d2f5f77c 471 PIRSF PIRSF006060 2 466 9.1E-63 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C4901_06415 e8ce96777b801593c9151286d2f5f77c 471 Pfam PF00324 Amino acid permease 36 413 1.2E-28 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 C4901_16870 430b6365c55115eb780631b7cff40959 449 Pfam PF01225 Mur ligase family, catalytic domain 2 98 3.6E-16 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 C4901_16870 430b6365c55115eb780631b7cff40959 449 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 447 3.7E-196 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 C4901_16870 430b6365c55115eb780631b7cff40959 449 Gene3D G3DSA:3.40.1190.10 90 312 1.9E-61 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_16870 430b6365c55115eb780631b7cff40959 449 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 448 56.676 T 14-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 C4901_16870 430b6365c55115eb780631b7cff40959 449 Gene3D G3DSA:3.40.50.720 1 89 2.3E-31 T 14-10-2018 C4901_16870 430b6365c55115eb780631b7cff40959 449 SUPERFAMILY SSF53244 309 447 2.75E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_16870 430b6365c55115eb780631b7cff40959 449 SUPERFAMILY SSF53623 94 307 2.49E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 C4901_16870 430b6365c55115eb780631b7cff40959 449 SUPERFAMILY SSF51984 1 89 3.4E-22 T 14-10-2018 C4901_16870 430b6365c55115eb780631b7cff40959 449 Pfam PF08245 Mur ligase middle domain 107 290 2.9E-21 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 C4901_16870 430b6365c55115eb780631b7cff40959 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 358 3.1E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 C4901_16870 430b6365c55115eb780631b7cff40959 449 Gene3D G3DSA:3.90.190.20 313 448 7.9E-29 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 C4901_05765 386e3c5bcb5909f2d53ba9bc4a211fe8 295 Gene3D G3DSA:3.30.200.20 3 103 3.8E-30 T 14-10-2018 C4901_05765 386e3c5bcb5909f2d53ba9bc4a211fe8 295 Pfam PF01259 SAICAR synthetase 14 267 2.6E-98 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_05765 386e3c5bcb5909f2d53ba9bc4a211fe8 295 ProSitePatterns PS01057 SAICAR synthetase signature 1. 105 119 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_05765 386e3c5bcb5909f2d53ba9bc4a211fe8 295 Gene3D G3DSA:3.30.470.20 105 248 5.8E-59 T 14-10-2018 C4901_05765 386e3c5bcb5909f2d53ba9bc4a211fe8 295 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 14 291 1.1E-74 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 C4901_05765 386e3c5bcb5909f2d53ba9bc4a211fe8 295 SUPERFAMILY SSF56104 7 291 7.85E-99 T 14-10-2018 C4901_05765 386e3c5bcb5909f2d53ba9bc4a211fe8 295 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 11 292 25.363 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_15710 12db3dea8df5a8919a9ab119781b5469 203 PIRSF PIRSF024492 1 168 1.4E-39 T 14-10-2018 IPR014519 Uncharacterised conserved protein UCP024492 C4901_15710 12db3dea8df5a8919a9ab119781b5469 203 Pfam PF04343 Protein of unknown function, DUF488 11 123 3.8E-25 T 14-10-2018 IPR007438 Protein of unknown function DUF488 C4901_15500 a6a485c6e871e4b432c526f2fa3926b2 173 Pfam PF06146 Phosphate-starvation-inducible E 89 155 5.0E-14 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 603 5.4E-73 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 Pfam PF13721 SecD export protein N-terminal TM region 1 102 2.1E-28 T 14-10-2018 IPR027398 SecD export protein N-terminal TM domain C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 Gene3D G3DSA:1.20.1640.10 438 621 1.9E-11 T 14-10-2018 C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 Pfam PF07549 SecD/SecF GG Motif 114 138 2.2E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 122 610 3.2E-137 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 Gene3D G3DSA:3.30.70.3400 199 282 1.4E-17 T 14-10-2018 C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 624 44.981 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 SUPERFAMILY SSF82866 420 618 2.35E-40 T 14-10-2018 C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 Gene3D G3DSA:3.30.1360.200 283 437 7.8E-24 T 14-10-2018 C4901_11375 ab9b0b71227b5efc6354c05e61df958a 625 Pfam PF02355 Protein export membrane protein 443 613 5.6E-23 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial C4901_06720 800cff58900afa57a1d2127fc1eccca1 501 SUPERFAMILY SSF53098 24 494 4.32E-100 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_06720 800cff58900afa57a1d2127fc1eccca1 501 Pfam PF02281 Transposase Tn5 dimerisation domain 402 486 4.2E-9 T 14-10-2018 IPR003201 Transposase Tn5, dimerisation C4901_06720 800cff58900afa57a1d2127fc1eccca1 501 Gene3D G3DSA:1.10.740.10 388 494 7.5E-11 T 14-10-2018 IPR014737 Transposase, Tn5-like, C-terminal C4901_06720 800cff58900afa57a1d2127fc1eccca1 501 Gene3D G3DSA:1.10.246.40 14 81 1.2E-13 T 14-10-2018 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily C4901_06720 800cff58900afa57a1d2127fc1eccca1 501 Pfam PF01609 Transposase DDE domain 193 397 4.0E-7 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_06720 800cff58900afa57a1d2127fc1eccca1 501 Pfam PF14706 Transposase DNA-binding 24 80 1.6E-21 T 14-10-2018 IPR014735 Transposase, Tn5-like, N-terminal C4901_06720 800cff58900afa57a1d2127fc1eccca1 501 Gene3D G3DSA:3.90.350.10 82 387 6.3E-75 T 14-10-2018 IPR014736 Transposase, Tn5-like, core C4901_04755 3230670d1dcd3810d832c7b78e01c6c2 328 SUPERFAMILY SSF81464 35 123 1.41E-15 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04755 3230670d1dcd3810d832c7b78e01c6c2 328 Pfam PF06481 COX Aromatic Rich Motif 253 299 1.2E-8 T 14-10-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 C4901_04755 3230670d1dcd3810d832c7b78e01c6c2 328 SUPERFAMILY SSF49503 137 296 1.37E-41 T 14-10-2018 IPR008972 Cupredoxin C4901_04755 3230670d1dcd3810d832c7b78e01c6c2 328 Gene3D G3DSA:2.60.40.420 128 297 2.8E-45 T 14-10-2018 IPR008972 Cupredoxin C4901_04755 3230670d1dcd3810d832c7b78e01c6c2 328 Gene3D G3DSA:1.10.287.90 35 120 1.2E-20 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04755 3230670d1dcd3810d832c7b78e01c6c2 328 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 162 239 4.1E-7 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00515 4f917385a6e081877563c014b9a03d9e 326 Gene3D G3DSA:3.20.20.70 6 249 5.5E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_00515 4f917385a6e081877563c014b9a03d9e 326 PIRSF PIRSF006621 1 326 2.0E-102 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C4901_00515 4f917385a6e081877563c014b9a03d9e 326 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.544 T 14-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 C4901_00515 4f917385a6e081877563c014b9a03d9e 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 C4901_00515 4f917385a6e081877563c014b9a03d9e 326 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 2.4E-104 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 C4901_00515 4f917385a6e081877563c014b9a03d9e 326 SUPERFAMILY SSF51395 10 318 9.16E-90 T 14-10-2018 C4901_00515 4f917385a6e081877563c014b9a03d9e 326 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 318 6.3E-125 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 C4901_00515 4f917385a6e081877563c014b9a03d9e 326 Gene3D G3DSA:1.10.1200.80 251 324 1.6E-13 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 C4901_03045 67fe7942b57e116955d4fa849dcecb26 118 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 110 2.0E-20 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 C4901_03045 67fe7942b57e116955d4fa849dcecb26 118 PIRSF PIRSF033490 1 113 3.8E-24 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 C4901_03045 67fe7942b57e116955d4fa849dcecb26 118 SUPERFAMILY SSF50118 2 113 6.21E-22 T 14-10-2018 C4901_03045 67fe7942b57e116955d4fa849dcecb26 118 Gene3D G3DSA:2.30.30.110 1 113 1.5E-23 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor C4901_01315 3801f9a636fa412e850d3028a4b30636 472 SUPERFAMILY SSF52833 313 464 8.5E-7 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_01315 3801f9a636fa412e850d3028a4b30636 472 Gene3D G3DSA:3.40.30.10 321 470 2.3E-15 T 14-10-2018 C4901_04570 de18e1396e548e5ed60e14b8a533b94d 417 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 43 54 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04570 de18e1396e548e5ed60e14b8a533b94d 417 SUPERFAMILY SSF56762 16 417 2.35E-138 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04570 de18e1396e548e5ed60e14b8a533b94d 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 417 1.9E-125 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04570 de18e1396e548e5ed60e14b8a533b94d 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 417 50.254 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04570 de18e1396e548e5ed60e14b8a533b94d 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 6 417 1.8E-186 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04570 de18e1396e548e5ed60e14b8a533b94d 417 Gene3D G3DSA:1.10.645.20 4 417 1.9E-174 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_00560 692453994fd72b0093ba340a89cf06ce 240 Pfam PF12146 Serine aminopeptidase, S33 11 117 4.9E-9 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 C4901_00560 692453994fd72b0093ba340a89cf06ce 240 SUPERFAMILY SSF53474 8 225 5.4E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_00560 692453994fd72b0093ba340a89cf06ce 240 Gene3D G3DSA:3.40.50.1820 2 226 1.1E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_01430 ea396be0880ba7c15a7389b04c8e39d1 626 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 599 4.3E-73 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 C4901_01430 ea396be0880ba7c15a7389b04c8e39d1 626 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 603 8.6E-199 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 C4901_01430 ea396be0880ba7c15a7389b04c8e39d1 626 Gene3D G3DSA:3.30.1390.30 84 159 1.0E-36 T 14-10-2018 C4901_01430 ea396be0880ba7c15a7389b04c8e39d1 626 SUPERFAMILY SSF56601 249 603 2.0E-94 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like C4901_01430 ea396be0880ba7c15a7389b04c8e39d1 626 SUPERFAMILY SSF56519 55 247 4.71E-42 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 C4901_01430 ea396be0880ba7c15a7389b04c8e39d1 626 Gene3D G3DSA:3.90.1310.10 63 243 1.0E-36 T 14-10-2018 C4901_01430 ea396be0880ba7c15a7389b04c8e39d1 626 Pfam PF03717 Penicillin-binding Protein dimerisation domain 63 234 2.2E-35 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 C4901_01430 ea396be0880ba7c15a7389b04c8e39d1 626 Gene3D G3DSA:3.40.710.10 244 608 5.6E-95 T 14-10-2018 C4901_01145 9b211189857526d3687ad151d0c4a2d1 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 10 326 33.962 T 14-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 C4901_01145 9b211189857526d3687ad151d0c4a2d1 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 39 319 5.5E-102 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 C4901_01145 9b211189857526d3687ad151d0c4a2d1 329 SUPERFAMILY SSF53659 11 322 3.39E-100 T 14-10-2018 C4901_01145 9b211189857526d3687ad151d0c4a2d1 329 Gene3D G3DSA:3.40.718.10 7 326 1.8E-112 T 14-10-2018 C4901_01145 9b211189857526d3687ad151d0c4a2d1 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 13 322 2.7E-114 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 C4901_09570 ccd7de4c2cd80da4c8bcce9196ca6aaf 204 Pfam PF01618 MotA/TolQ/ExbB proton channel family 69 187 3.8E-33 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C4901_00445 8ed90b2f7071334d8fa6090078387adb 260 Gene3D G3DSA:1.10.10.10 149 246 6.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_00445 8ed90b2f7071334d8fa6090078387adb 260 SMART SM00862 169 243 5.8E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C4901_00445 8ed90b2f7071334d8fa6090078387adb 260 SUPERFAMILY SSF46894 153 243 3.68E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C4901_00445 8ed90b2f7071334d8fa6090078387adb 260 Pfam PF00486 Transcriptional regulatory protein, C terminal 170 242 7.9E-13 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C4901_10895 deb95f6a18d82fc97f79f637cc4f69e9 164 Gene3D G3DSA:1.20.120.1370 7 160 1.5E-39 T 14-10-2018 IPR038309 Rsd/AlgQ superfamily C4901_10895 deb95f6a18d82fc97f79f637cc4f69e9 164 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 12 152 5.1E-33 T 14-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 C4901_07110 bed6452a68becde1f0ef7a99996e2cb2 237 Pfam PF02565 Recombination protein O C terminal 89 225 2.1E-22 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 C4901_07110 bed6452a68becde1f0ef7a99996e2cb2 237 Gene3D G3DSA:2.40.50.140 3 79 2.1E-28 T 14-10-2018 C4901_07110 bed6452a68becde1f0ef7a99996e2cb2 237 Hamap MF_00201 DNA repair protein RecO [recO]. 2 233 20.843 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 C4901_07110 bed6452a68becde1f0ef7a99996e2cb2 237 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 157 8.1E-22 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 C4901_07110 bed6452a68becde1f0ef7a99996e2cb2 237 SUPERFAMILY SSF50249 3 76 1.2E-12 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_07110 bed6452a68becde1f0ef7a99996e2cb2 237 Pfam PF11967 Recombination protein O N terminal 1 76 2.8E-18 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal C4901_07110 bed6452a68becde1f0ef7a99996e2cb2 237 SUPERFAMILY SSF57863 89 207 4.45E-12 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger C4901_07110 bed6452a68becde1f0ef7a99996e2cb2 237 Gene3D G3DSA:1.20.1440.120 81 236 3.1E-47 T 14-10-2018 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 Pfam PF00551 Formyl transferase 88 263 5.9E-37 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 PIRSF PIRSF036480 2 284 2.2E-110 T 14-10-2018 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 SUPERFAMILY SSF55021 4 82 1.37E-15 T 14-10-2018 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 Gene3D G3DSA:3.30.70.260 2 87 1.1E-27 T 14-10-2018 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 111 138 4.9E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 39 51 4.9E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 7 33 4.9E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 257 282 4.9E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 89 111 4.9E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 235 257 4.9E-55 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 2 283 47.027 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 Gene3D G3DSA:3.40.50.170 88 284 2.8E-71 T 14-10-2018 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 SUPERFAMILY SSF53328 88 284 4.84E-62 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_10210 53f2b3f2b85fe57301f694209221484c 284 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 6 283 1.4E-100 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 C4901_04765 f500526050a2d1ce522111434656f044 211 Pfam PF00510 Cytochrome c oxidase subunit III 28 208 3.3E-12 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04765 f500526050a2d1ce522111434656f044 211 SUPERFAMILY SSF81452 25 208 1.06E-39 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04765 f500526050a2d1ce522111434656f044 211 Gene3D G3DSA:1.20.120.80 23 210 2.0E-37 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_00250 9284e1fe899e58d08120d576d7f70912 221 SUPERFAMILY SSF53335 5 206 7.25E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_00250 9284e1fe899e58d08120d576d7f70912 221 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 11 200 1.2E-36 T 14-10-2018 C4901_00250 9284e1fe899e58d08120d576d7f70912 221 Gene3D G3DSA:3.40.50.150 5 213 4.9E-48 T 14-10-2018 C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 440 1.4E-89 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 Pfam PF07690 Major Facilitator Superfamily 24 417 1.1E-60 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 SUPERFAMILY SSF103473 12 480 5.89E-75 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 Gene3D G3DSA:1.20.1720.10 19 229 7.6E-49 T 14-10-2018 C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 Gene3D G3DSA:1.20.1250.20 267 487 2.1E-30 T 14-10-2018 C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 3.0E-8 T 14-10-2018 C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 3.0E-8 T 14-10-2018 C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 310 334 3.0E-8 T 14-10-2018 C4901_11710 7efa0a4334a6bf0262b8705adf0f1b9e 498 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 3.0E-8 T 14-10-2018 C4901_10665 0929006f2bed7288698d2086059bf6b0 508 SUPERFAMILY SSF103473 17 490 6.67E-31 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_10665 0929006f2bed7288698d2086059bf6b0 508 Gene3D G3DSA:1.20.1720.10 18 222 1.4E-21 T 14-10-2018 C4901_10665 0929006f2bed7288698d2086059bf6b0 508 Gene3D G3DSA:1.20.1250.20 264 491 6.9E-6 T 14-10-2018 C4901_10665 0929006f2bed7288698d2086059bf6b0 508 Pfam PF07690 Major Facilitator Superfamily 21 410 1.4E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 Gene3D G3DSA:1.10.1050.10 7 209 6.8E-83 T 14-10-2018 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 Pfam PF01479 S4 domain 100 146 3.0E-18 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 Gene3D G3DSA:3.10.290.10 98 194 6.8E-83 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 209 33.559 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 SMART SM00363 99 163 2.0E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 SMART SM01390 4 98 7.5E-50 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 7 98 1.3E-32 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 8 209 2.0E-73 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 SUPERFAMILY SSF55174 7 209 3.93E-66 T 14-10-2018 C4901_14005 811b2d8c555f7c1bfbf0c00b3312839d 209 ProSitePatterns PS00632 Ribosomal protein S4 signature. 97 121 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 Gene3D G3DSA:3.30.9.10 83 320 7.6E-94 T 14-10-2018 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 SUPERFAMILY SSF54373 234 318 5.89E-5 T 14-10-2018 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 Gene3D G3DSA:3.50.50.60 7 363 7.6E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 18 28 3.5E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 46 3.5E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 79 91 3.5E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 3.5E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 5 17 3.5E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 344 356 3.5E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 Pfam PF01266 FAD dependent oxidoreductase 7 322 1.2E-41 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 349 359 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 C4901_00200 b331b4ba1e27a17bea351a89cf3b995c 387 SUPERFAMILY SSF51905 5 226 5.18E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_02045 c72db3fa051eebc88bdfb31acfaef8c8 397 TIGRFAM TIGR01898 cas_TM1791_cmr6: CRISPR type III-B/RAMP module RAMP protein Cmr6 91 300 4.7E-28 T 14-10-2018 IPR010172 CRISPR-associated protein, TM1791 C4901_02045 c72db3fa051eebc88bdfb31acfaef8c8 397 Pfam PF03787 RAMP superfamily 85 300 1.7E-11 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein C4901_02200 88f6dd5e969cc83fb348a90fbcac06a6 475 Pfam PF00083 Sugar (and other) transporter 58 455 1.5E-51 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 C4901_02200 88f6dd5e969cc83fb348a90fbcac06a6 475 SUPERFAMILY SSF103473 11 454 9.94E-78 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_02200 88f6dd5e969cc83fb348a90fbcac06a6 475 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C4901_02040 8e6bee116804eec4f8c20c8444b640b0 121 Pfam PF09701 CRISPR-associated protein (Cas_Cmr5) 6 114 7.1E-22 T 14-10-2018 IPR010160 CRISPR-associated protein, Cmr5 C4901_02040 8e6bee116804eec4f8c20c8444b640b0 121 TIGRFAM TIGR01881 cas_Cmr5: CRISPR type III-B/RAMP module-associated protein Cmr5 29 113 3.5E-7 T 14-10-2018 IPR010160 CRISPR-associated protein, Cmr5 C4901_02040 8e6bee116804eec4f8c20c8444b640b0 121 SUPERFAMILY SSF158568 5 114 1.09E-23 T 14-10-2018 IPR023101 AF1862-like domain superfamily C4901_02040 8e6bee116804eec4f8c20c8444b640b0 121 Gene3D G3DSA:1.10.520.30 1 119 1.3E-16 T 14-10-2018 IPR023101 AF1862-like domain superfamily C4901_10710 3e359205e748d41152560b608fd45d94 628 SUPERFAMILY SSF81442 107 601 1.09E-126 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 Gene3D G3DSA:1.20.210.10 92 604 9.4E-143 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 459 478 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 178 202 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 373 388 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 396 417 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 509 530 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 248 266 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 327 348 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 150 173 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 431 449 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 101 126 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 277 296 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 PRINTS PR01165 Cytochrome c oxidase subunit I signature 219 231 3.3E-56 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10710 3e359205e748d41152560b608fd45d94 628 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 112 550 2.0E-104 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_08390 7f142cb133719e4eddb4c9ccf0bda99d 257 Gene3D G3DSA:3.60.20.10 1 256 2.2E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_08390 7f142cb133719e4eddb4c9ccf0bda99d 257 Pfam PF13230 Glutamine amidotransferases class-II 37 213 1.1E-9 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 C4901_08390 7f142cb133719e4eddb4c9ccf0bda99d 257 SUPERFAMILY SSF56235 2 250 2.76E-26 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_13765 5da6e96bd2ab033aad44ef2d7f07594a 227 SUPERFAMILY SSF52402 6 225 7.72E-62 T 14-10-2018 C4901_13765 5da6e96bd2ab033aad44ef2d7f07594a 227 Gene3D G3DSA:3.40.50.620 5 225 6.1E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_13765 5da6e96bd2ab033aad44ef2d7f07594a 227 Pfam PF06508 Queuosine biosynthesis protein QueC 8 218 2.5E-71 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C4901_13765 5da6e96bd2ab033aad44ef2d7f07594a 227 PIRSF PIRSF006293 5 227 1.1E-70 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C4901_13765 5da6e96bd2ab033aad44ef2d7f07594a 227 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 7 224 54.084 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C4901_13765 5da6e96bd2ab033aad44ef2d7f07594a 227 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 9 211 6.9E-57 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 C4901_06345 9e1e6c218de8ba036c44c78d8c392800 838 Gene3D G3DSA:2.40.170.20 269 838 1.5E-39 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C4901_06345 9e1e6c218de8ba036c44c78d8c392800 838 Pfam PF00593 TonB dependent receptor 366 836 1.1E-18 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C4901_06345 9e1e6c218de8ba036c44c78d8c392800 838 SUPERFAMILY SSF56935 123 838 2.31E-59 T 14-10-2018 C4901_06345 9e1e6c218de8ba036c44c78d8c392800 838 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 821 838 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site C4901_06345 9e1e6c218de8ba036c44c78d8c392800 838 Gene3D G3DSA:2.170.130.10 112 256 2.3E-6 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C4901_06345 9e1e6c218de8ba036c44c78d8c392800 838 Pfam PF07715 TonB-dependent Receptor Plug Domain 130 221 2.0E-7 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C4901_11705 1b03cfd2cb5c43cb8c37c943c729c4f6 114 SMART SM00387 4 109 6.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_11705 1b03cfd2cb5c43cb8c37c943c729c4f6 114 PRINTS PR00344 Bacterial sensor protein C-terminal signature 39 53 6.9E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_11705 1b03cfd2cb5c43cb8c37c943c729c4f6 114 PRINTS PR00344 Bacterial sensor protein C-terminal signature 69 87 6.9E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_11705 1b03cfd2cb5c43cb8c37c943c729c4f6 114 Gene3D G3DSA:3.30.565.10 1 112 5.4E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_11705 1b03cfd2cb5c43cb8c37c943c729c4f6 114 SUPERFAMILY SSF55874 2 109 2.49E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_11705 1b03cfd2cb5c43cb8c37c943c729c4f6 114 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 8 106 9.7E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_08070 e552013ce867a859e5dd2b0caf3bb646 201 Pfam PF01292 Prokaryotic cytochrome b561 10 189 1.7E-17 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 C4901_08070 e552013ce867a859e5dd2b0caf3bb646 201 Gene3D G3DSA:1.20.950.20 2 182 1.6E-8 T 14-10-2018 C4901_08070 e552013ce867a859e5dd2b0caf3bb646 201 SUPERFAMILY SSF81342 9 194 9.42E-14 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C4901_03225 56f544b84377a74fb130f08b8cebcacb 130 Gene3D G3DSA:2.30.30.220 1 119 1.1E-38 T 14-10-2018 IPR036760 SspB-like superfamily C4901_03225 56f544b84377a74fb130f08b8cebcacb 130 Pfam PF04386 Stringent starvation protein B 4 115 1.2E-23 T 14-10-2018 IPR007481 Stringent starvation protein B C4901_03225 56f544b84377a74fb130f08b8cebcacb 130 SUPERFAMILY SSF101738 2 108 5.76E-35 T 14-10-2018 IPR036760 SspB-like superfamily C4901_12700 84a75a0bdd9e84b53e1d478958d7304d 133 Pfam PF14534 Domain of unknown function (DUF4440) 13 113 9.0E-13 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 C4901_12700 84a75a0bdd9e84b53e1d478958d7304d 133 SUPERFAMILY SSF54427 12 120 6.21E-16 T 14-10-2018 IPR032710 NTF2-like domain superfamily C4901_12700 84a75a0bdd9e84b53e1d478958d7304d 133 Gene3D G3DSA:3.10.450.50 3 120 1.3E-13 T 14-10-2018 C4901_09630 c5397e47a85bd2619bdd6e0cb4a11065 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 222 6.3E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C4901_09630 c5397e47a85bd2619bdd6e0cb4a11065 228 Pfam PF00072 Response regulator receiver domain 4 114 3.9E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_09630 c5397e47a85bd2619bdd6e0cb4a11065 228 Gene3D G3DSA:3.40.50.2300 1 117 4.3E-39 T 14-10-2018 C4901_09630 c5397e47a85bd2619bdd6e0cb4a11065 228 Gene3D G3DSA:1.10.10.10 118 226 1.7E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_09630 c5397e47a85bd2619bdd6e0cb4a11065 228 SMART SM00448 2 113 8.3E-44 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_09630 c5397e47a85bd2619bdd6e0cb4a11065 228 SMART SM00862 146 222 6.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 C4901_09630 c5397e47a85bd2619bdd6e0cb4a11065 228 SUPERFAMILY SSF52172 1 177 2.2E-43 T 14-10-2018 IPR011006 CheY-like superfamily C4901_01625 5a7019918adea990db765c025e8044da 257 SUPERFAMILY SSF52540 6 239 9.67E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01625 5a7019918adea990db765c025e8044da 257 SMART SM00382 31 228 2.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01625 5a7019918adea990db765c025e8044da 257 Pfam PF00005 ABC transporter 23 172 1.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_01625 5a7019918adea990db765c025e8044da 257 Gene3D G3DSA:3.40.50.300 4 251 2.0E-65 T 14-10-2018 C4901_01625 5a7019918adea990db765c025e8044da 257 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_03645 bd87e3ad996d222f9d35001431e35441 140 Gene3D G3DSA:3.10.180.10 1 114 2.4E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_03645 bd87e3ad996d222f9d35001431e35441 140 SUPERFAMILY SSF54593 1 107 2.22E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_16030 4972e8d875b048db8aa26c45c3bfa756 66 Gene3D G3DSA:1.10.1660.10 4 57 2.8E-8 T 14-10-2018 C4901_16030 4972e8d875b048db8aa26c45c3bfa756 66 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 9 55 3.0E-18 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 C4901_16030 4972e8d875b048db8aa26c45c3bfa756 66 Pfam PF12728 Helix-turn-helix domain 9 56 8.4E-19 T 14-10-2018 C4901_16030 4972e8d875b048db8aa26c45c3bfa756 66 SUPERFAMILY SSF46955 8 60 9.34E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 Pfam PF00072 Response regulator receiver domain 8 119 1.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 Gene3D G3DSA:1.10.10.10 232 292 3.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 SUPERFAMILY SSF46894 222 291 1.16E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 SMART SM00448 6 119 4.6E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 263 275 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 247 263 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 233 247 1.8E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 Gene3D G3DSA:3.40.50.12740 5 175 8.8E-45 T 14-10-2018 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 ProSitePatterns PS00622 LuxR-type HTH domain signature. 247 274 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 Pfam PF00196 Bacterial regulatory proteins, luxR family 233 287 5.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 SUPERFAMILY SSF52172 3 128 6.69E-40 T 14-10-2018 IPR011006 CheY-like superfamily C4901_06225 e90ebe2cd96e2b66924e7f90e235a2d5 303 SMART SM00421 230 287 2.4E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 C4901_07310 1fa5b0e9a35615f737a61a5cc1371e37 233 SUPERFAMILY SSF56925 41 211 1.73E-5 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C4901_09530 7797d469db0b20ef15dea51547042880 71 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 61 3.7E-21 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C4901_09530 7797d469db0b20ef15dea51547042880 71 SUPERFAMILY SSF52788 1 61 9.29E-26 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily C4901_09530 7797d469db0b20ef15dea51547042880 71 Gene3D G3DSA:3.40.50.2300 1 70 1.0E-28 T 14-10-2018 C4901_09530 7797d469db0b20ef15dea51547042880 71 SMART SM00226 2 71 1.2E-5 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C4901_09530 7797d469db0b20ef15dea51547042880 71 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 3.1E-9 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C4901_09530 7797d469db0b20ef15dea51547042880 71 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 3.1E-9 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 C4901_04175 9b89166a6d53a6a01e40d5be87f55eae 354 SUPERFAMILY SSF51395 2 347 1.01E-111 T 14-10-2018 C4901_04175 9b89166a6d53a6a01e40d5be87f55eae 354 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 338 9.7E-63 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 C4901_04175 9b89166a6d53a6a01e40d5be87f55eae 354 Gene3D G3DSA:3.20.20.70 1 353 1.4E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_11320 3cbccb8e1b7aaea358dc9d6a820baae5 159 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 17 152 8.0E-50 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11320 3cbccb8e1b7aaea358dc9d6a820baae5 159 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 16 153 2.8E-53 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11320 3cbccb8e1b7aaea358dc9d6a820baae5 159 SUPERFAMILY SSF52121 7 157 2.75E-57 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11320 3cbccb8e1b7aaea358dc9d6a820baae5 159 Gene3D G3DSA:3.40.50.960 5 158 6.2E-57 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11320 3cbccb8e1b7aaea358dc9d6a820baae5 159 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 11 156 30.627 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_10720 b87f3882922cc2de2259eac340b71236 183 Gene3D G3DSA:2.60.40.420 37 179 2.9E-20 T 14-10-2018 IPR008972 Cupredoxin C4901_10720 b87f3882922cc2de2259eac340b71236 183 SUPERFAMILY SSF49503 40 177 1.31E-15 T 14-10-2018 IPR008972 Cupredoxin C4901_10520 475a943512eeb2450a414fcdd5a99b71 145 Gene3D G3DSA:3.40.50.300 1 143 2.1E-34 T 14-10-2018 C4901_10520 475a943512eeb2450a414fcdd5a99b71 145 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 134 6.7E-30 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 C4901_10520 475a943512eeb2450a414fcdd5a99b71 145 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 125 2.5E-29 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 C4901_10520 475a943512eeb2450a414fcdd5a99b71 145 SUPERFAMILY SSF52540 23 114 4.5E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11395 200f147b71a72041e66e82b6a928637a 348 Gene3D G3DSA:2.40.10.240 64 162 1.5E-111 T 14-10-2018 C4901_11395 200f147b71a72041e66e82b6a928637a 348 Gene3D G3DSA:3.40.1780.10 14 339 1.5E-111 T 14-10-2018 C4901_11395 200f147b71a72041e66e82b6a928637a 348 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 340 44.534 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C4901_11395 200f147b71a72041e66e82b6a928637a 348 SUPERFAMILY SSF111337 1 339 1.16E-125 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C4901_11395 200f147b71a72041e66e82b6a928637a 348 Pfam PF02547 Queuosine biosynthesis protein 5 339 6.0E-125 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C4901_11395 200f147b71a72041e66e82b6a928637a 348 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 4 339 1.9E-120 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 Gene3D G3DSA:3.90.45.10 1 166 8.5E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 PRINTS PR01576 Peptide deformylase signature 101 119 2.0E-36 T 14-10-2018 IPR023635 Peptide deformylase C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 PRINTS PR01576 Peptide deformylase signature 89 100 2.0E-36 T 14-10-2018 IPR023635 Peptide deformylase C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 PRINTS PR01576 Peptide deformylase signature 120 149 2.0E-36 T 14-10-2018 IPR023635 Peptide deformylase C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 PRINTS PR01576 Peptide deformylase signature 33 62 2.0E-36 T 14-10-2018 IPR023635 Peptide deformylase C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.224 T 14-10-2018 IPR023635 Peptide deformylase C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 SUPERFAMILY SSF56420 3 164 2.22E-60 T 14-10-2018 IPR036821 Peptide deformylase superfamily C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 PIRSF PIRSF004749 1 167 2.4E-55 T 14-10-2018 IPR023635 Peptide deformylase C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 Pfam PF01327 Polypeptide deformylase 4 152 8.6E-50 T 14-10-2018 IPR023635 Peptide deformylase C4901_00815 46bb0ab8512b476853acc7d487ccbd69 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 6.6E-53 T 14-10-2018 IPR023635 Peptide deformylase C4901_00355 38e54581c34665c4ca6ca4f3eb46e4c2 588 Pfam PF01609 Transposase DDE domain 191 465 1.3E-10 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_16465 62a0feae711b544be27ec20526ae68b0 209 SUPERFAMILY SSF54001 22 171 6.45E-18 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily C4901_16465 62a0feae711b544be27ec20526ae68b0 209 Gene3D G3DSA:3.10.620.30 2 144 2.3E-10 T 14-10-2018 C4901_16465 62a0feae711b544be27ec20526ae68b0 209 Pfam PF01841 Transglutaminase-like superfamily 28 132 2.3E-12 T 14-10-2018 IPR002931 Transglutaminase-like C4901_14695 2a4d59dd2b42776501e323d746580b5b 343 SUPERFAMILY SSF46626 20 175 2.4E-46 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_14695 2a4d59dd2b42776501e323d746580b5b 343 Pfam PF03150 Di-haem cytochrome c peroxidase 37 187 4.2E-50 T 14-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 C4901_14695 2a4d59dd2b42776501e323d746580b5b 343 Gene3D G3DSA:1.10.760.10 174 321 8.0E-98 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_14695 2a4d59dd2b42776501e323d746580b5b 343 SUPERFAMILY SSF46626 174 335 7.0E-27 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_14695 2a4d59dd2b42776501e323d746580b5b 343 PIRSF PIRSF000294 1 340 1.5E-96 T 14-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 C4901_14695 2a4d59dd2b42776501e323d746580b5b 343 Gene3D G3DSA:1.10.760.10 33 173 8.0E-98 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_12575 b0c0735f9a43c4af95fe3eead45adb51 218 SUPERFAMILY SSF52141 33 215 2.09E-62 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_12575 b0c0735f9a43c4af95fe3eead45adb51 218 Pfam PF03167 Uracil DNA glycosylase superfamily 63 209 9.4E-47 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_12575 b0c0735f9a43c4af95fe3eead45adb51 218 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 49 212 8.5E-63 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 C4901_12575 b0c0735f9a43c4af95fe3eead45adb51 218 SMART SM00986 63 209 7.6E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_12575 b0c0735f9a43c4af95fe3eead45adb51 218 Gene3D G3DSA:3.40.470.10 38 218 1.1E-71 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_12575 b0c0735f9a43c4af95fe3eead45adb51 218 SMART SM00987 63 209 7.6E-41 T 14-10-2018 C4901_02085 dc2772291376acb606fe7e1bb40fbccd 278 Gene3D G3DSA:3.100.10.20 36 106 4.6E-7 T 14-10-2018 C4901_02085 dc2772291376acb606fe7e1bb40fbccd 278 Pfam PF01867 CRISPR associated protein Cas1 38 109 2.6E-6 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 C4901_03110 53988dbc2369a59db8beccc584726750 310 Pfam PF00005 ABC transporter 27 169 1.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_03110 53988dbc2369a59db8beccc584726750 310 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_03110 53988dbc2369a59db8beccc584726750 310 Gene3D G3DSA:3.40.50.300 5 242 1.9E-67 T 14-10-2018 C4901_03110 53988dbc2369a59db8beccc584726750 310 SUPERFAMILY SSF52540 5 231 1.84E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03110 53988dbc2369a59db8beccc584726750 310 SMART SM00382 34 242 2.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_04775 79e6f11f141dd10af7c12c9022f8c91f 387 Pfam PF13635 Domain of unknown function (DUF4143) 176 333 7.4E-21 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 C4901_04775 79e6f11f141dd10af7c12c9022f8c91f 387 SUPERFAMILY SSF52540 6 135 5.45E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04775 79e6f11f141dd10af7c12c9022f8c91f 387 Gene3D G3DSA:3.40.50.300 4 72 1.6E-7 T 14-10-2018 C4901_04775 79e6f11f141dd10af7c12c9022f8c91f 387 Pfam PF13173 AAA domain 18 134 9.7E-27 T 14-10-2018 C4901_03530 b801b656cd27b7d956b82854437a7b86 168 Pfam PF00583 Acetyltransferase (GNAT) family 44 144 1.4E-14 T 14-10-2018 IPR000182 GNAT domain C4901_03530 b801b656cd27b7d956b82854437a7b86 168 Gene3D G3DSA:3.40.630.30 19 153 9.1E-23 T 14-10-2018 C4901_03530 b801b656cd27b7d956b82854437a7b86 168 SUPERFAMILY SSF55729 20 152 6.08E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_03315 da8df16696576f55d9721a3483c8e7c8 402 Pfam PF02353 Mycolic acid cyclopropane synthetase 105 377 2.7E-97 T 14-10-2018 C4901_03315 da8df16696576f55d9721a3483c8e7c8 402 PIRSF PIRSF003085 9 398 7.4E-124 T 14-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 C4901_03315 da8df16696576f55d9721a3483c8e7c8 402 Gene3D G3DSA:3.40.50.150 114 386 7.1E-102 T 14-10-2018 C4901_03315 da8df16696576f55d9721a3483c8e7c8 402 SUPERFAMILY SSF53335 116 382 6.04E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_16070 d1627ec12e54cb57afde53b5ce66e709 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 4 124 1.4E-44 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 C4901_16070 d1627ec12e54cb57afde53b5ce66e709 127 SUPERFAMILY SSF55298 2 125 1.24E-42 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C4901_16070 d1627ec12e54cb57afde53b5ce66e709 127 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 102 120 - T 14-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 C4901_16070 d1627ec12e54cb57afde53b5ce66e709 127 Pfam PF01042 Endoribonuclease L-PSP 9 123 1.8E-38 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 C4901_16070 d1627ec12e54cb57afde53b5ce66e709 127 Gene3D G3DSA:3.30.1330.40 1 126 5.4E-46 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C4901_02405 9e08cfe05f7b74d620af09305afe6aca 201 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 3 199 8.4E-25 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 C4901_02405 9e08cfe05f7b74d620af09305afe6aca 201 SUPERFAMILY SSF89392 15 200 1.18E-32 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX C4901_02405 9e08cfe05f7b74d620af09305afe6aca 201 Pfam PF03550 Outer membrane lipoprotein LolB 44 198 4.9E-31 T 14-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 C4901_02405 9e08cfe05f7b74d620af09305afe6aca 201 Gene3D G3DSA:2.50.20.10 24 201 1.1E-33 T 14-10-2018 C4901_01125 be6eefc416617bb2cadf1b3f6ab6e607 218 Gene3D G3DSA:3.90.550.10 1 217 4.3E-54 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_01125 be6eefc416617bb2cadf1b3f6ab6e607 218 SUPERFAMILY SSF53448 1 215 2.16E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_01125 be6eefc416617bb2cadf1b3f6ab6e607 218 Pfam PF00483 Nucleotidyl transferase 2 146 2.7E-17 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 C4901_09545 bc3350bb163f1e864640489a244d74d7 62 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 26.854 T 14-10-2018 IPR038053 Uncharacterised protein family UPF0434 C4901_09545 bc3350bb163f1e864640489a244d74d7 62 Pfam PF03966 Trm112p-like protein 2 40 8.2E-13 T 14-10-2018 IPR005651 Trm112-like C4901_09545 bc3350bb163f1e864640489a244d74d7 62 SUPERFAMILY SSF158997 1 55 3.92E-22 T 14-10-2018 C4901_09545 bc3350bb163f1e864640489a244d74d7 62 Gene3D G3DSA:2.20.25.10 8 62 2.3E-25 T 14-10-2018 C4901_05915 bcfb3b113d36586b0feeb11e320594a9 337 Gene3D G3DSA:3.30.420.40 8 326 3.7E-103 T 14-10-2018 C4901_05915 bcfb3b113d36586b0feeb11e320594a9 337 Pfam PF02685 Glucokinase 8 328 5.0E-96 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 C4901_05915 bcfb3b113d36586b0feeb11e320594a9 337 Gene3D G3DSA:3.40.367.20 104 315 3.7E-103 T 14-10-2018 C4901_05915 bcfb3b113d36586b0feeb11e320594a9 337 Hamap MF_00524 Glucokinase [glk]. 6 332 31.405 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 C4901_05915 bcfb3b113d36586b0feeb11e320594a9 337 TIGRFAM TIGR00749 glk: glucokinase 8 326 5.3E-80 T 14-10-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0005536|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 C4901_05915 bcfb3b113d36586b0feeb11e320594a9 337 SUPERFAMILY SSF53067 10 332 9.26E-51 T 14-10-2018 C4901_14890 533323e0465ea9ae215da90b2d5ec514 217 Gene3D G3DSA:2.60.40.420 50 206 2.6E-31 T 14-10-2018 IPR008972 Cupredoxin C4901_14890 533323e0465ea9ae215da90b2d5ec514 217 SUPERFAMILY SSF49503 93 206 5.81E-13 T 14-10-2018 IPR008972 Cupredoxin C4901_12540 313825bec19b334440c4d4df55d69760 134 Gene3D G3DSA:3.40.50.10110 1 132 2.4E-31 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily C4901_12540 313825bec19b334440c4d4df55d69760 134 SUPERFAMILY SSF102400 1 132 8.37E-29 T 14-10-2018 IPR036768 DNA polymerase III subunit chi superfamily C4901_12540 313825bec19b334440c4d4df55d69760 134 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 127 2.0E-29 T 14-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 C4901_13835 64343678c66006f9dbfa78d6807317ed 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 74 93 1.3E-10 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 C4901_13835 64343678c66006f9dbfa78d6807317ed 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 131 144 1.3E-10 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 C4901_13835 64343678c66006f9dbfa78d6807317ed 156 PRINTS PR01404 DATP pyrophosphohydrolase signature 25 46 1.3E-10 T 14-10-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 C4901_13835 64343678c66006f9dbfa78d6807317ed 156 Pfam PF00293 NUDIX domain 11 131 3.7E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_13835 64343678c66006f9dbfa78d6807317ed 156 SUPERFAMILY SSF55811 9 148 4.87E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_13835 64343678c66006f9dbfa78d6807317ed 156 Gene3D G3DSA:3.90.79.10 6 147 2.3E-28 T 14-10-2018 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 PRINTS PR01100 Shikimate kinase family signature 32 45 3.6E-24 T 14-10-2018 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 PRINTS PR01100 Shikimate kinase family signature 60 68 3.6E-24 T 14-10-2018 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 PRINTS PR01100 Shikimate kinase family signature 8 23 3.6E-24 T 14-10-2018 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 PRINTS PR01100 Shikimate kinase family signature 78 87 3.6E-24 T 14-10-2018 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 PRINTS PR01100 Shikimate kinase family signature 99 116 3.6E-24 T 14-10-2018 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 Gene3D G3DSA:3.40.50.300 5 177 1.3E-57 T 14-10-2018 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 Pfam PF01202 Shikimate kinase 14 164 4.7E-50 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 ProSitePatterns PS01128 Shikimate kinase signature. 61 86 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 SUPERFAMILY SSF52540 7 167 4.47E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16290 940c2774f8fab4e463cf64d3b3d61779 180 Hamap MF_00109 Shikimate kinase [aroK]. 5 171 29.293 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 C4901_08370 145734b99756c96164d5788d14cd8535 239 SUPERFAMILY SSF64438 6 238 2.56E-69 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic C4901_08370 145734b99756c96164d5788d14cd8535 239 Gene3D G3DSA:3.60.140.10 2 239 6.7E-77 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily C4901_08370 145734b99756c96164d5788d14cd8535 239 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 237 7.9E-66 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase C4901_08370 145734b99756c96164d5788d14cd8535 239 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 238 6.5E-49 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase C4901_16745 2cb219869e5477bbacaa6f29c5d31cc5 740 Gene3D G3DSA:3.40.50.970 41 377 8.7E-36 T 14-10-2018 C4901_16745 2cb219869e5477bbacaa6f29c5d31cc5 740 SUPERFAMILY SSF52518 390 580 3.24E-27 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_16745 2cb219869e5477bbacaa6f29c5d31cc5 740 Pfam PF09364 XFP N-terminal domain 103 256 1.5E-8 T 14-10-2018 IPR018970 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal C4901_16745 2cb219869e5477bbacaa6f29c5d31cc5 740 Gene3D G3DSA:3.40.50.970 399 594 2.5E-37 T 14-10-2018 C4901_16745 2cb219869e5477bbacaa6f29c5d31cc5 740 SUPERFAMILY SSF52518 48 339 2.49E-33 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_16745 2cb219869e5477bbacaa6f29c5d31cc5 740 SUPERFAMILY SSF52922 589 737 7.53E-7 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 C4901_16745 2cb219869e5477bbacaa6f29c5d31cc5 740 SMART SM00861 392 580 0.0024 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain C4901_16745 2cb219869e5477bbacaa6f29c5d31cc5 740 Pfam PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 411 558 9.0E-14 T 14-10-2018 IPR005593 Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase GO:0005975|GO:0016832 C4901_13415 c444f030d0ad4ca3a35c008a0eb56768 248 Pfam PF01791 DeoC/LacD family aldolase 27 209 5.3E-15 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 C4901_13415 c444f030d0ad4ca3a35c008a0eb56768 248 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 12 222 2.2E-42 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 C4901_13415 c444f030d0ad4ca3a35c008a0eb56768 248 SUPERFAMILY SSF51569 9 241 3.87E-53 T 14-10-2018 C4901_13415 c444f030d0ad4ca3a35c008a0eb56768 248 PIRSF PIRSF001357 4 248 6.7E-54 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 C4901_13415 c444f030d0ad4ca3a35c008a0eb56768 248 Gene3D G3DSA:3.20.20.70 5 248 5.0E-65 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_13415 c444f030d0ad4ca3a35c008a0eb56768 248 SMART SM01133 9 243 2.0E-36 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 C4901_06985 5fb31b2528c836ba68f24da3ea66011a 244 SUPERFAMILY SSF55729 45 200 1.6E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_06985 5fb31b2528c836ba68f24da3ea66011a 244 Gene3D G3DSA:3.40.630.30 18 236 6.3E-59 T 14-10-2018 C4901_06985 5fb31b2528c836ba68f24da3ea66011a 244 Pfam PF13302 Acetyltransferase (GNAT) domain 56 176 2.8E-12 T 14-10-2018 IPR000182 GNAT domain C4901_10020 9629060ed7c45c613184dfbea1b67d7e 185 Pfam PF00293 NUDIX domain 45 163 4.2E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_10020 9629060ed7c45c613184dfbea1b67d7e 185 Gene3D G3DSA:3.90.79.10 3 181 1.3E-39 T 14-10-2018 C4901_10020 9629060ed7c45c613184dfbea1b67d7e 185 SUPERFAMILY SSF55811 28 174 8.26E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_12500 6401b1860e6000c9ad2af5a52d10c471 214 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_12500 6401b1860e6000c9ad2af5a52d10c471 214 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 7 205 1.8E-65 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 C4901_12500 6401b1860e6000c9ad2af5a52d10c471 214 SMART SM00382 30 211 1.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_12500 6401b1860e6000c9ad2af5a52d10c471 214 Gene3D G3DSA:3.40.50.300 2 203 1.2E-43 T 14-10-2018 C4901_12500 6401b1860e6000c9ad2af5a52d10c471 214 SUPERFAMILY SSF52540 4 195 7.03E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12500 6401b1860e6000c9ad2af5a52d10c471 214 Pfam PF00005 ABC transporter 23 163 7.9E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_15080 07e59fb4103627aeab460ec4349d3620 352 Pfam PF03595 Voltage-dependent anion channel 11 331 2.0E-47 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 C4901_15080 07e59fb4103627aeab460ec4349d3620 352 Gene3D G3DSA:1.50.10.150 7 339 4.1E-12 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily C4901_09610 7800b27705128a8697ce78a0176aee7a 376 Gene3D G3DSA:3.30.70.360 179 292 2.8E-116 T 14-10-2018 C4901_09610 7800b27705128a8697ce78a0176aee7a 376 Pfam PF01546 Peptidase family M20/M25/M40 63 371 1.3E-42 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 C4901_09610 7800b27705128a8697ce78a0176aee7a 376 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 2 375 49.427 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 C4901_09610 7800b27705128a8697ce78a0176aee7a 376 SUPERFAMILY SSF55031 179 288 1.33E-25 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain C4901_09610 7800b27705128a8697ce78a0176aee7a 376 SUPERFAMILY SSF53187 2 373 1.36E-63 T 14-10-2018 C4901_09610 7800b27705128a8697ce78a0176aee7a 376 Pfam PF07687 Peptidase dimerisation domain 176 282 4.0E-18 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain C4901_09610 7800b27705128a8697ce78a0176aee7a 376 Gene3D G3DSA:3.40.630.10 7 362 2.8E-116 T 14-10-2018 C4901_09610 7800b27705128a8697ce78a0176aee7a 376 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 2.1E-151 T 14-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 C4901_02550 0121729c0e529e1f951f06638f72212b 258 Pfam PF00227 Proteasome subunit 4 186 7.8E-9 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 C4901_02550 0121729c0e529e1f951f06638f72212b 258 PIRSF PIRSF009120 1 248 3.9E-92 T 14-10-2018 IPR016545 Uncharacterised conserved protein UCP009120, proteasome-type protease, Sll0069 C4901_02550 0121729c0e529e1f951f06638f72212b 258 Gene3D G3DSA:3.60.20.10 2 205 1.5E-26 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_02550 0121729c0e529e1f951f06638f72212b 258 SUPERFAMILY SSF56235 2 240 9.77E-34 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_08930 9bc1c5309eb428cad3e7e044d7797854 281 Pfam PF12840 Helix-turn-helix domain 9 69 3.9E-15 T 14-10-2018 C4901_08930 9bc1c5309eb428cad3e7e044d7797854 281 SMART SM00418 8 88 5.9E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_08930 9bc1c5309eb428cad3e7e044d7797854 281 Gene3D G3DSA:3.40.50.2300 121 258 1.7E-36 T 14-10-2018 C4901_08930 9bc1c5309eb428cad3e7e044d7797854 281 SUPERFAMILY SSF52788 123 256 1.7E-36 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily C4901_08930 9bc1c5309eb428cad3e7e044d7797854 281 Gene3D G3DSA:1.10.10.10 2 93 1.1E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_08930 9bc1c5309eb428cad3e7e044d7797854 281 SUPERFAMILY SSF46785 4 93 1.66E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_08930 9bc1c5309eb428cad3e7e044d7797854 281 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 125 253 1.3E-21 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C4901_08930 9bc1c5309eb428cad3e7e044d7797854 281 SMART SM00226 123 257 6.8E-36 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I C4901_14060 dbc50d0c5b10d5746b44f622bcb205a8 101 SUPERFAMILY SSF57716 2 101 1.21E-35 T 14-10-2018 C4901_14060 dbc50d0c5b10d5746b44f622bcb205a8 101 Gene3D G3DSA:4.10.830.10 40 101 1.5E-23 T 14-10-2018 C4901_14060 dbc50d0c5b10d5746b44f622bcb205a8 101 Pfam PF00253 Ribosomal protein S14p/S29e 48 100 4.4E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14060 dbc50d0c5b10d5746b44f622bcb205a8 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.966 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid C4901_13605 a393447cae7fb9d4cdf4aa8f91f73268 105 Pfam PF13683 Integrase core domain 29 93 2.6E-16 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_13605 a393447cae7fb9d4cdf4aa8f91f73268 105 SUPERFAMILY SSF53098 11 102 1.17E-21 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_03095 49b2fd8754fbe826dc4e3aa5394ac4fa 158 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 5 149 1.9E-54 T 14-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 C4901_03095 49b2fd8754fbe826dc4e3aa5394ac4fa 158 Pfam PF02470 MlaD protein 41 118 2.7E-23 T 14-10-2018 IPR003399 Mce/MlaD C4901_07955 e50068e2803950b2bb0f4f83ce558d8c 365 Gene3D G3DSA:3.30.1400.10 210 348 3.7E-37 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 C4901_07955 e50068e2803950b2bb0f4f83ce558d8c 365 SMART SM00771 210 340 3.2E-31 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C4901_07955 e50068e2803950b2bb0f4f83ce558d8c 365 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 213 331 2.0E-18 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C4901_07955 e50068e2803950b2bb0f4f83ce558d8c 365 SUPERFAMILY SSF64383 211 346 1.57E-33 T 14-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 C4901_07955 e50068e2803950b2bb0f4f83ce558d8c 365 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 214 339 5.5E-35 T 14-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 C4901_14875 f752bf31921bf6d43e03ff5fe3b5b318 275 SUPERFAMILY SSF103481 23 123 1.31E-14 T 14-10-2018 C4901_14875 f752bf31921bf6d43e03ff5fe3b5b318 275 Pfam PF00892 EamA-like transporter family 128 262 9.8E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_14875 f752bf31921bf6d43e03ff5fe3b5b318 275 Pfam PF00892 EamA-like transporter family 2 119 9.5E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_14875 f752bf31921bf6d43e03ff5fe3b5b318 275 SUPERFAMILY SSF103481 164 264 2.88E-12 T 14-10-2018 C4901_05940 1f1a20da6b7a731bc64240240b94452a 496 SUPERFAMILY SSF51445 13 491 2.25E-151 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_05940 1f1a20da6b7a731bc64240240b94452a 496 Gene3D G3DSA:3.20.20.80 11 492 1.8E-168 T 14-10-2018 C4901_05940 1f1a20da6b7a731bc64240240b94452a 496 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 10 490 1.7E-83 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 C4901_05940 1f1a20da6b7a731bc64240240b94452a 496 Pfam PF02446 4-alpha-glucanotransferase 20 470 1.4E-137 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 C4901_11980 d8f6dee4bd8bdf428503ddf4dd82be83 459 SUPERFAMILY SSF54966 2 137 3.53E-46 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_11980 d8f6dee4bd8bdf428503ddf4dd82be83 459 Hamap MF_01339 Ribulose bisphosphate carboxylase [cbbM]. 1 459 77.449 T 14-10-2018 IPR020871 Ribulose bisphosphate carboxylase large subunit, type II GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_11980 d8f6dee4bd8bdf428503ddf4dd82be83 459 SUPERFAMILY SSF51649 138 455 3.4E-110 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_11980 d8f6dee4bd8bdf428503ddf4dd82be83 459 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 186 194 - T 14-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_11980 d8f6dee4bd8bdf428503ddf4dd82be83 459 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 143 440 3.1E-113 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_11980 d8f6dee4bd8bdf428503ddf4dd82be83 459 Gene3D G3DSA:3.20.20.110 137 439 1.2E-128 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_11980 d8f6dee4bd8bdf428503ddf4dd82be83 459 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 13 130 1.6E-35 T 14-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_11980 d8f6dee4bd8bdf428503ddf4dd82be83 459 Gene3D G3DSA:3.30.70.150 5 136 1.6E-47 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_07115 e4c7d864c1716bf7f20a959ea582eb54 241 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 2 234 1.1E-92 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C4901_07115 e4c7d864c1716bf7f20a959ea582eb54 241 SUPERFAMILY SSF63892 1 235 4.58E-93 T 14-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C4901_07115 e4c7d864c1716bf7f20a959ea582eb54 241 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 2 234 7.0E-97 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C4901_07115 e4c7d864c1716bf7f20a959ea582eb54 241 Gene3D G3DSA:3.20.20.70 1 240 4.4E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_07115 e4c7d864c1716bf7f20a959ea582eb54 241 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 239 123.284 T 14-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 C4901_07395 031678bfb22a5b5d002714a52b848deb 262 Pfam PF01609 Transposase DDE domain 17 169 7.0E-9 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_07395 031678bfb22a5b5d002714a52b848deb 262 SUPERFAMILY SSF53098 17 179 1.59E-12 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_12475 5ccbc8d23e6cdb37a39c74d61bb5a2bd 177 ProSitePatterns PS00194 Thioredoxin family active site. 64 82 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C4901_12475 5ccbc8d23e6cdb37a39c74d61bb5a2bd 177 Pfam PF08534 Redoxin 35 156 6.3E-15 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 C4901_12475 5ccbc8d23e6cdb37a39c74d61bb5a2bd 177 SUPERFAMILY SSF52833 29 168 1.04E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_12475 5ccbc8d23e6cdb37a39c74d61bb5a2bd 177 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 5 169 2.2E-42 T 14-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 C4901_12475 5ccbc8d23e6cdb37a39c74d61bb5a2bd 177 Gene3D G3DSA:3.40.30.10 22 176 1.0E-37 T 14-10-2018 C4901_11050 74e4e59f86d1c56d5ac8cfc41fef4b97 134 SUPERFAMILY SSF47413 65 128 1.84E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_11050 74e4e59f86d1c56d5ac8cfc41fef4b97 134 Pfam PF15731 Antitoxin component of bacterial toxin-antitoxin system, MqsA 1 131 1.7E-64 T 14-10-2018 IPR032758 Antitoxin MqsA/HigA-2 C4901_11050 74e4e59f86d1c56d5ac8cfc41fef4b97 134 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 47 6.6E-13 T 14-10-2018 IPR022453 Zinc finger, MqsA-type C4901_11050 74e4e59f86d1c56d5ac8cfc41fef4b97 134 Gene3D G3DSA:1.20.58.720 1 63 6.8E-30 T 14-10-2018 C4901_11050 74e4e59f86d1c56d5ac8cfc41fef4b97 134 Gene3D G3DSA:1.10.260.40 64 131 5.0E-23 T 14-10-2018 C4901_11050 74e4e59f86d1c56d5ac8cfc41fef4b97 134 TIGRFAM TIGR03830 CxxCG_CxxCG_HTH: putative zinc finger/helix-turn-helix protein, YgiT family 3 131 1.6E-45 T 14-10-2018 IPR022452 Antitoxin MqsA C4901_11050 74e4e59f86d1c56d5ac8cfc41fef4b97 134 SMART SM00530 73 127 1.2E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_04460 1ea3b4d23726178620e85a9f07f7aa7f 550 SUPERFAMILY SSF52540 5 506 1.32E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04460 1ea3b4d23726178620e85a9f07f7aa7f 550 Gene3D G3DSA:3.40.50.300 1 258 1.3E-38 T 14-10-2018 C4901_04460 1ea3b4d23726178620e85a9f07f7aa7f 550 Gene3D G3DSA:3.40.50.300 283 550 3.5E-49 T 14-10-2018 C4901_04460 1ea3b4d23726178620e85a9f07f7aa7f 550 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 549 9.3E-144 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 C4901_04460 1ea3b4d23726178620e85a9f07f7aa7f 550 SUPERFAMILY SSF52540 1 217 5.5E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04460 1ea3b4d23726178620e85a9f07f7aa7f 550 PIRSF PIRSF003128 1 550 2.1E-151 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 C4901_04460 1ea3b4d23726178620e85a9f07f7aa7f 550 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 505 8.6E-15 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal C4901_09010 33d4eea4d0344bd2a40fb773a6d8568e 203 Gene3D G3DSA:3.40.1180.10 136 203 9.5E-16 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C4901_09010 33d4eea4d0344bd2a40fb773a6d8568e 203 Pfam PF01255 Putative undecaprenyl diphosphate synthase 144 202 2.8E-15 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C4901_09010 33d4eea4d0344bd2a40fb773a6d8568e 203 Pfam PF01255 Putative undecaprenyl diphosphate synthase 12 131 5.2E-18 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 C4901_09010 33d4eea4d0344bd2a40fb773a6d8568e 203 SUPERFAMILY SSF64005 4 196 1.7E-42 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C4901_09010 33d4eea4d0344bd2a40fb773a6d8568e 203 Gene3D G3DSA:3.40.1180.10 1 135 2.3E-23 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 C4901_16130 a7631bcd3f2852f8bb6317318e4cc19c 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site C4901_16130 a7631bcd3f2852f8bb6317318e4cc19c 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 1.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_16130 a7631bcd3f2852f8bb6317318e4cc19c 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 1.5E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_16130 a7631bcd3f2852f8bb6317318e4cc19c 198 SUPERFAMILY SSF46689 9 85 5.99E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_16130 a7631bcd3f2852f8bb6317318e4cc19c 198 Gene3D G3DSA:1.10.357.10 9 198 2.6E-35 T 14-10-2018 C4901_16130 a7631bcd3f2852f8bb6317318e4cc19c 198 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 89 196 4.1E-7 T 14-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal C4901_16130 a7631bcd3f2852f8bb6317318e4cc19c 198 SUPERFAMILY SSF48498 87 196 1.16E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C4901_16130 a7631bcd3f2852f8bb6317318e4cc19c 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 62 8.9E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_14855 37a4ff03df8dfcee451c309a728cfaac 135 Gene3D G3DSA:3.90.1010.10 1 130 6.1E-54 T 14-10-2018 C4901_14855 37a4ff03df8dfcee451c309a728cfaac 135 Pfam PF01592 NifU-like N terminal domain 3 125 1.1E-52 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C4901_14855 37a4ff03df8dfcee451c309a728cfaac 135 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 4.7E-64 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C4901_14855 37a4ff03df8dfcee451c309a728cfaac 135 SUPERFAMILY SSF82649 2 126 9.68E-46 T 14-10-2018 C4901_15020 cad82dec600e1691b9b40132ad4ec20b 341 Gene3D G3DSA:3.30.450.20 5 164 1.3E-11 T 14-10-2018 C4901_15020 cad82dec600e1691b9b40132ad4ec20b 341 SUPERFAMILY SSF103190 52 102 4.71E-7 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily C4901_08200 834cf11b10f3847be046859764060627 367 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 78 97 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 C4901_08200 834cf11b10f3847be046859764060627 367 SUPERFAMILY SSF51395 2 348 5.5E-94 T 14-10-2018 C4901_08200 834cf11b10f3847be046859764060627 367 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 1 333 45.695 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 C4901_08200 834cf11b10f3847be046859764060627 367 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 289 309 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 C4901_08200 834cf11b10f3847be046859764060627 367 Pfam PF01180 Dihydroorotate dehydrogenase 43 335 5.7E-84 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 C4901_08200 834cf11b10f3847be046859764060627 367 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 354 1.7E-115 T 14-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 C4901_08200 834cf11b10f3847be046859764060627 367 Gene3D G3DSA:3.20.20.70 1 331 7.6E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_00375 891e12870e9597b3029387b1826e92b2 197 Pfam PF14236 Domain of unknown function (DUF4338) 55 155 5.8E-16 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_03115 f95f403ba7b2752d5620651447492315 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 191 210 2.1E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_03115 f95f403ba7b2752d5620651447492315 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 171 190 2.1E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_03115 f95f403ba7b2752d5620651447492315 251 PRINTS PR00164 ABC-2 type transport system membrane protein signature 53 75 2.1E-9 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_03115 f95f403ba7b2752d5620651447492315 251 PIRSF PIRSF006648 2 248 2.4E-21 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 C4901_03115 f95f403ba7b2752d5620651447492315 251 Pfam PF01061 ABC-2 type transporter 4 214 1.7E-34 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 C4901_15030 a853d07fa85c05577695802d57ba451c 852 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 15 819 4.4E-257 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 C4901_15030 a853d07fa85c05577695802d57ba451c 852 Hamap MF_01871 UPF0753 protein . 10 833 23.383 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 C4901_12220 3b4119e2da5c1095adfed7c94f875e27 113 Gene3D G3DSA:2.20.28.10 69 102 4.8E-28 T 14-10-2018 C4901_12220 3b4119e2da5c1095adfed7c94f875e27 113 Gene3D G3DSA:3.30.2320.50 2 109 4.8E-28 T 14-10-2018 C4901_12220 3b4119e2da5c1095adfed7c94f875e27 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 112 2.9E-28 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 C4901_12220 3b4119e2da5c1095adfed7c94f875e27 113 PIRSF PIRSF004761 1 113 3.6E-32 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 C4901_12220 3b4119e2da5c1095adfed7c94f875e27 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 8.9E-30 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 C4901_12220 3b4119e2da5c1095adfed7c94f875e27 113 Hamap MF_00213 Hydrogenase maturation factor HypA [hypA]. 1 113 20.887 T 14-10-2018 IPR000688 Hydrogenase maturation factor HypA/HybF GO:0016151|GO:0051604 C4901_10705 b54fc629c2ac892abfb66adf907291b7 184 Gene3D G3DSA:1.20.120.80 20 184 1.2E-7 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_12030 04fefd07eea5a7095642320df3e20cc1 311 Pfam PF00294 pfkB family carbohydrate kinase 5 295 4.1E-42 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB C4901_12030 04fefd07eea5a7095642320df3e20cc1 311 Gene3D G3DSA:3.40.1190.20 1 303 1.7E-111 T 14-10-2018 IPR029056 Ribokinase-like C4901_12030 04fefd07eea5a7095642320df3e20cc1 311 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 3 305 3.7E-117 T 14-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 C4901_12030 04fefd07eea5a7095642320df3e20cc1 311 SUPERFAMILY SSF53613 5 302 3.59E-57 T 14-10-2018 IPR029056 Ribokinase-like C4901_15880 4cdad6047940ab1b837c9c3dc6950a45 398 Gene3D G3DSA:3.30.750.80 77 181 7.6E-32 T 14-10-2018 C4901_15880 4cdad6047940ab1b837c9c3dc6950a45 398 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 172 305 4.3E-18 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 C4901_15880 4cdad6047940ab1b837c9c3dc6950a45 398 SUPERFAMILY SSF88697 4 74 3.38E-12 T 14-10-2018 IPR015947 PUA-like superfamily C4901_15880 4cdad6047940ab1b837c9c3dc6950a45 398 Gene3D G3DSA:3.40.50.150 182 396 1.2E-65 T 14-10-2018 C4901_15880 4cdad6047940ab1b837c9c3dc6950a45 398 Gene3D G3DSA:2.30.130.10 5 74 2.8E-20 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 C4901_15880 4cdad6047940ab1b837c9c3dc6950a45 398 SUPERFAMILY SSF53335 86 391 4.22E-70 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_12005 81446a368c96bff6da882f83ffc4250f 290 Pfam PF13641 Glycosyltransferase like family 2 50 262 1.1E-9 T 14-10-2018 C4901_12005 81446a368c96bff6da882f83ffc4250f 290 SUPERFAMILY SSF53448 45 276 4.93E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_12005 81446a368c96bff6da882f83ffc4250f 290 Gene3D G3DSA:3.90.550.10 40 260 6.7E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_14625 3e2435ae39e0a72af376bc1e97f40e09 137 SUPERFAMILY SSF52833 4 102 1.83E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_14625 3e2435ae39e0a72af376bc1e97f40e09 137 PRINTS PR00421 Thioredoxin family signature 68 79 2.9E-8 T 14-10-2018 C4901_14625 3e2435ae39e0a72af376bc1e97f40e09 137 PRINTS PR00421 Thioredoxin family signature 21 29 2.9E-8 T 14-10-2018 C4901_14625 3e2435ae39e0a72af376bc1e97f40e09 137 PRINTS PR00421 Thioredoxin family signature 29 38 2.9E-8 T 14-10-2018 C4901_14625 3e2435ae39e0a72af376bc1e97f40e09 137 Pfam PF00085 Thioredoxin 4 100 1.6E-25 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C4901_14625 3e2435ae39e0a72af376bc1e97f40e09 137 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 102 5.6E-30 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C4901_14625 3e2435ae39e0a72af376bc1e97f40e09 137 Gene3D G3DSA:3.40.30.10 2 106 1.4E-29 T 14-10-2018 C4901_14625 3e2435ae39e0a72af376bc1e97f40e09 137 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C4901_09090 af1bccb05afd3ca19f5bb476de888d5e 328 Pfam PF12762 ISXO2-like transposase domain 140 291 2.9E-33 T 14-10-2018 IPR024445 ISXO2-like transposase domain C4901_09090 af1bccb05afd3ca19f5bb476de888d5e 328 Pfam PF12760 Transposase zinc-ribbon domain 18 65 6.9E-9 T 14-10-2018 IPR024442 Transposase, zinc-ribbon C4901_09090 af1bccb05afd3ca19f5bb476de888d5e 328 SMART SM01126 140 291 5.3E-43 T 14-10-2018 IPR024445 ISXO2-like transposase domain C4901_06680 35148d142e12a63aed0d25000e8b4315 371 SUPERFAMILY SSF53756 17 368 1.26E-61 T 14-10-2018 C4901_06680 35148d142e12a63aed0d25000e8b4315 371 Pfam PF13439 Glycosyltransferase Family 4 18 170 1.9E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C4901_06680 35148d142e12a63aed0d25000e8b4315 371 Pfam PF00534 Glycosyl transferases group 1 193 346 1.3E-25 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_06680 35148d142e12a63aed0d25000e8b4315 371 Gene3D G3DSA:3.40.50.2000 99 360 4.0E-45 T 14-10-2018 C4901_06680 35148d142e12a63aed0d25000e8b4315 371 Gene3D G3DSA:3.40.50.2000 175 348 4.0E-45 T 14-10-2018 C4901_13555 688b4953dbc175935199cea849bcdbb4 165 Pfam PF01527 Transposase 3 51 6.4E-6 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C4901_13555 688b4953dbc175935199cea849bcdbb4 165 SUPERFAMILY SSF46689 2 143 8.6E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_06435 dfbc7dfe53522349dd50d1990c325313 441 SUPERFAMILY SSF55931 99 440 1.67E-104 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 C4901_06435 dfbc7dfe53522349dd50d1990c325313 441 Pfam PF00120 Glutamine synthetase, catalytic domain 100 438 1.4E-104 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_06435 dfbc7dfe53522349dd50d1990c325313 441 Gene3D G3DSA:3.10.20.70 1 101 5.0E-16 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_06435 dfbc7dfe53522349dd50d1990c325313 441 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 230 245 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 C4901_06435 dfbc7dfe53522349dd50d1990c325313 441 Gene3D G3DSA:3.30.590.10 102 440 4.0E-111 T 14-10-2018 C4901_06435 dfbc7dfe53522349dd50d1990c325313 441 SUPERFAMILY SSF54368 5 98 2.49E-21 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_06435 dfbc7dfe53522349dd50d1990c325313 441 SMART SM01230 99 353 6.5E-110 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 C4901_06435 dfbc7dfe53522349dd50d1990c325313 441 TIGRFAM TIGR03105 gln_synth_III: glutamine synthetase, type III 7 440 1.0E-188 T 14-10-2018 IPR017536 Glutamine synthetase, type III C4901_16180 066780a322cd3fba82a8f6be60c8924b 398 SUPERFAMILY SSF56935 38 398 6.41E-7 T 14-10-2018 C4901_16180 066780a322cd3fba82a8f6be60c8924b 398 Pfam PF11336 Protein of unknown function (DUF3138) 27 398 1.1E-80 T 14-10-2018 IPR021485 Protein of unknown function DUF3138 C4901_09965 8252354ca5ebef90017d9948dcfc12ff 385 Gene3D G3DSA:1.20.1250.20 211 385 1.9E-17 T 14-10-2018 C4901_09965 8252354ca5ebef90017d9948dcfc12ff 385 ProSitePatterns PS00216 Sugar transport proteins signature 1. 268 285 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C4901_09965 8252354ca5ebef90017d9948dcfc12ff 385 SUPERFAMILY SSF103473 16 385 1.57E-42 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_09965 8252354ca5ebef90017d9948dcfc12ff 385 Pfam PF07690 Major Facilitator Superfamily 27 264 2.2E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_09965 8252354ca5ebef90017d9948dcfc12ff 385 Gene3D G3DSA:1.20.1250.20 14 202 4.6E-17 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 SUPERFAMILY SSF56235 2 517 2.89E-134 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 Gene3D G3DSA:1.10.246.130 228 333 4.9E-8 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 Gene3D G3DSA:3.60.20.40 334 518 4.0E-62 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 334 352 4.7E-29 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 132 4.7E-29 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 212 228 4.7E-29 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 93 111 4.7E-29 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 22 47 4.7E-29 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 241 260 4.7E-29 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 388 403 4.7E-29 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 358 376 4.7E-29 T 14-10-2018 C4901_04780 01fc4e904624581ce4f1639fe0a88c87 520 Pfam PF01019 Gamma-glutamyltranspeptidase 15 514 3.2E-118 T 14-10-2018 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 SUPERFAMILY SSF50249 2 123 4.37E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 PIRSF PIRSF002133 1 124 3.0E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 6.6E-69 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 39.63 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 Pfam PF00164 Ribosomal protein S12/S23 16 123 7.4E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 3.6E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 3.6E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 3.6E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 3.6E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 3.6E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 3.6E-61 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14150 ade315aa5151d276602befe9e9b3bd47 124 Gene3D G3DSA:2.40.50.140 1 124 5.0E-63 T 14-10-2018 C4901_00435 ece357c8e4c4b06336009f226f8a0562 366 Gene3D G3DSA:3.30.70.150 1 103 7.0E-17 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_00435 ece357c8e4c4b06336009f226f8a0562 366 SUPERFAMILY SSF51649 105 364 1.57E-61 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_00435 ece357c8e4c4b06336009f226f8a0562 366 SUPERFAMILY SSF54966 2 101 1.02E-19 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_00435 ece357c8e4c4b06336009f226f8a0562 366 Gene3D G3DSA:3.20.20.110 104 366 5.8E-72 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_00435 ece357c8e4c4b06336009f226f8a0562 366 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 108 364 2.2E-29 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 SUPERFAMILY SSF56425 239 382 1.04E-54 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 Pfam PF00890 FAD binding domain 12 241 1.6E-17 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 TIGRFAM TIGR02061 aprA: adenylylsulfate reductase, alpha subunit 12 617 0.0 T 14-10-2018 IPR011803 Adenylylsulphate reductase, alpha subunit KEGG: 00920+1.8.99.2|MetaCyc: PWY-5278|MetaCyc: PWY-5279 C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 Gene3D G3DSA:3.90.700.10 264 393 1.1E-261 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 Pfam PF02910 Fumarate reductase flavoprotein C-term 499 613 7.4E-7 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 SUPERFAMILY SSF51905 5 473 1.52E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 PIRSF PIRSF000171 1 622 2.2E-242 T 14-10-2018 C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 SUPERFAMILY SSF46977 486 617 2.09E-40 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 C4901_07620 e8b84ea4bbf2805f9de4d625be85d444 622 Gene3D G3DSA:3.50.50.90 10 617 1.1E-261 T 14-10-2018 C4901_06220 797f5c63758de2d154e9812740e8b421 334 Gene3D G3DSA:3.30.540.10 1 196 3.0E-76 T 14-10-2018 C4901_06220 797f5c63758de2d154e9812740e8b421 334 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 334 47.189 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 308 333 5.5E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 149 172 5.5E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 5.5E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 180 203 5.5E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 206 233 5.5E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 5.5E-71 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 PIRSF PIRSF500210 1 334 2.5E-128 T 14-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 PIRSF PIRSF000904 1 334 1.9E-126 T 14-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 194 1.6E-65 T 14-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 C4901_06220 797f5c63758de2d154e9812740e8b421 334 SUPERFAMILY SSF56655 3 332 3.0E-116 T 14-10-2018 C4901_06220 797f5c63758de2d154e9812740e8b421 334 Gene3D G3DSA:3.40.190.80 197 333 5.0E-54 T 14-10-2018 C4901_05865 4e0264044fd2fb1de1f4d218f05cfe68 135 Pfam PF01903 CbiX 27 130 4.5E-25 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 C4901_05865 4e0264044fd2fb1de1f4d218f05cfe68 135 SUPERFAMILY SSF53800 20 132 5.76E-28 T 14-10-2018 C4901_05865 4e0264044fd2fb1de1f4d218f05cfe68 135 Gene3D G3DSA:3.40.50.1400 17 135 8.7E-29 T 14-10-2018 C4901_04200 a31c8357115f27c4e1faf169440bd402 212 Gene3D G3DSA:3.30.1020.10 146 210 9.4E-23 T 14-10-2018 C4901_04200 a31c8357115f27c4e1faf169440bd402 212 PIRSF PIRSF000239 1 209 7.5E-75 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_04200 a31c8357115f27c4e1faf169440bd402 212 Pfam PF00578 AhpC/TSA family 6 135 6.3E-31 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_04200 a31c8357115f27c4e1faf169440bd402 212 Gene3D G3DSA:3.40.30.10 1 145 1.9E-50 T 14-10-2018 C4901_04200 a31c8357115f27c4e1faf169440bd402 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 187 4.3E-10 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_04200 a31c8357115f27c4e1faf169440bd402 212 SUPERFAMILY SSF52833 3 209 3.23E-63 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_16750 d523cdd12399655e866b85f5ac22c643 447 SUPERFAMILY SSF142764 14 443 4.84E-85 T 14-10-2018 C4901_16750 d523cdd12399655e866b85f5ac22c643 447 Pfam PF07005 Putative sugar-binding N-terminal domain 13 251 2.3E-57 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain C4901_16750 d523cdd12399655e866b85f5ac22c643 447 Gene3D G3DSA:3.40.980.20 263 446 7.1E-12 T 14-10-2018 C4901_16750 d523cdd12399655e866b85f5ac22c643 447 Gene3D G3DSA:3.40.50.10840 13 254 1.5E-23 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily C4901_16750 d523cdd12399655e866b85f5ac22c643 447 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 274 436 2.9E-36 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain C4901_01995 40eccee72de18cc9cf577e60273ec299 150 SUPERFAMILY SSF81593 9 105 5.1E-18 T 14-10-2018 C4901_01995 40eccee72de18cc9cf577e60273ec299 150 Pfam PF05168 HEPN domain 12 85 1.0E-16 T 14-10-2018 IPR007842 HEPN domain C4901_01995 40eccee72de18cc9cf577e60273ec299 150 SMART SM00748 14 102 8.6E-6 T 14-10-2018 IPR007842 HEPN domain C4901_01995 40eccee72de18cc9cf577e60273ec299 150 Gene3D G3DSA:1.20.120.330 3 103 2.7E-19 T 14-10-2018 C4901_15475 8e398611ec9870b30a4209922a60ed03 334 Pfam PF00589 Phage integrase family 166 326 2.5E-23 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_15475 8e398611ec9870b30a4209922a60ed03 334 Gene3D G3DSA:1.10.443.10 168 334 5.6E-32 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_15475 8e398611ec9870b30a4209922a60ed03 334 SUPERFAMILY SSF56349 60 329 3.83E-54 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_15475 8e398611ec9870b30a4209922a60ed03 334 Gene3D G3DSA:1.10.150.130 54 167 1.8E-7 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_00790 2841eda8c7a239a79dcc44e16df7f1f9 296 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 286 3.8E-53 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C4901_00790 2841eda8c7a239a79dcc44e16df7f1f9 296 PIRSF PIRSF026649 8 295 6.5E-79 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C4901_05405 c3911d4afdbebc8dd864b2bdc6e2db44 347 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 319 2.7E-25 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD C4901_05405 c3911d4afdbebc8dd864b2bdc6e2db44 347 TIGRFAM TIGR03476 HpnL: putative membrane protein 27 331 2.2E-70 T 14-10-2018 C4901_07750 61b137729f17fbf048f8d0942e6a680e 771 SUPERFAMILY SSF82866 601 760 1.12E-12 T 14-10-2018 C4901_07750 61b137729f17fbf048f8d0942e6a680e 771 SUPERFAMILY SSF82866 215 391 2.75E-13 T 14-10-2018 C4901_07750 61b137729f17fbf048f8d0942e6a680e 771 Pfam PF03176 MMPL family 177 384 3.4E-5 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 SUPERFAMILY SSF46785 12 111 7.48E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 Gene3D G3DSA:2.40.50.100 126 193 6.6E-28 T 14-10-2018 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 Gene3D G3DSA:2.40.50.100 196 267 3.2E-26 T 14-10-2018 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 87 2.8E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 SUPERFAMILY SSF50331 126 193 4.62E-22 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 Pfam PF03459 TOBE domain 128 191 2.9E-17 T 14-10-2018 IPR005116 Transport-associated OB, type 1 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 Pfam PF03459 TOBE domain 200 262 5.6E-11 T 14-10-2018 IPR005116 Transport-associated OB, type 1 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 Gene3D G3DSA:1.10.10.10 7 123 1.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 126 193 2.1E-25 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 199 265 1.1E-18 T 14-10-2018 IPR004606 Molybdenum-pterin binding GO:0015689 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 PIRSF PIRSF005763 9 267 1.3E-89 T 14-10-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 C4901_03975 a8815bc84c3a5c7eace95282c762c639 267 SUPERFAMILY SSF50331 199 265 7.53E-19 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal C4901_10550 f9541f8b886fdf36bbbdd25ae2c8fcb6 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 2 102 1.2E-26 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C4901_10550 f9541f8b886fdf36bbbdd25ae2c8fcb6 106 Gene3D G3DSA:3.30.1310.10 1 106 1.6E-39 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily C4901_10550 f9541f8b886fdf36bbbdd25ae2c8fcb6 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 3 96 21.668 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C4901_10550 f9541f8b886fdf36bbbdd25ae2c8fcb6 106 PIRSF PIRSF004555 1 106 9.9E-36 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C4901_10550 f9541f8b886fdf36bbbdd25ae2c8fcb6 106 SUPERFAMILY SSF82607 9 102 7.46E-32 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily C4901_10550 f9541f8b886fdf36bbbdd25ae2c8fcb6 106 Pfam PF02575 YbaB/EbfC DNA-binding family 9 98 6.7E-31 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family C4901_06795 b53bd2b93fc6b17c93910da51b1e7d93 258 SUPERFAMILY SSF103501 6 227 7.59E-40 T 14-10-2018 IPR036197 NarG-like superfamily C4901_06795 b53bd2b93fc6b17c93910da51b1e7d93 258 Pfam PF02665 Nitrate reductase gamma subunit 73 212 8.4E-14 T 14-10-2018 IPR023234 NarG-like domain C4901_06795 b53bd2b93fc6b17c93910da51b1e7d93 258 Gene3D G3DSA:1.20.950.20 57 219 1.8E-18 T 14-10-2018 C4901_10830 443ada06f7be75e07b6c7e33d46f096a 68 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 1.4E-30 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C4901_10830 443ada06f7be75e07b6c7e33d46f096a 68 Pfam PF04384 Iron-sulphur cluster assembly 3 65 1.1E-29 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C4901_10830 443ada06f7be75e07b6c7e33d46f096a 68 SUPERFAMILY SSF140319 3 64 1.83E-25 T 14-10-2018 IPR036762 IscX-like superfamily C4901_10830 443ada06f7be75e07b6c7e33d46f096a 68 Gene3D G3DSA:1.10.10.600 1 66 7.4E-27 T 14-10-2018 IPR036762 IscX-like superfamily C4901_10830 443ada06f7be75e07b6c7e33d46f096a 68 PIRSF PIRSF039003 3 66 2.0E-31 T 14-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 C4901_08020 0a8bbfa6bd0b9f6ec0ed341dbc0e22ca 195 SUPERFAMILY SSF48150 1 182 4.08E-47 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 C4901_08020 0a8bbfa6bd0b9f6ec0ed341dbc0e22ca 195 Gene3D G3DSA:1.10.340.30 1 103 3.1E-29 T 14-10-2018 C4901_08020 0a8bbfa6bd0b9f6ec0ed341dbc0e22ca 195 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 2 143 4.1E-16 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C4901_08020 0a8bbfa6bd0b9f6ec0ed341dbc0e22ca 195 SMART SM00478 6 163 1.7E-28 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 C4901_08020 0a8bbfa6bd0b9f6ec0ed341dbc0e22ca 195 Gene3D G3DSA:1.10.1670.10 104 192 4.8E-16 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 C4901_08020 0a8bbfa6bd0b9f6ec0ed341dbc0e22ca 195 PIRSF PIRSF001435 1 189 4.4E-67 T 14-10-2018 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 SUPERFAMILY SSF52540 22 254 7.94E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 1.5E-142 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 5.4E-31 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 338 171.33 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 271 331 7.0E-21 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 SMART SM00382 54 182 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 Gene3D G3DSA:3.40.50.300 22 184 1.5E-39 T 14-10-2018 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 62 81 3.9E-6 T 14-10-2018 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 333 338 3.9E-6 T 14-10-2018 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 Gene3D G3DSA:1.10.10.10 260 336 5.4E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 Gene3D G3DSA:1.10.8.60 185 258 1.8E-27 T 14-10-2018 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 1.6E-112 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 C4901_13810 c60fcd7e11f872e28d9ff8eba3135ae1 338 SUPERFAMILY SSF46785 260 333 3.97E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_16790 3ceb11e8bf53884e1a113a47b5c959f7 566 Gene3D G3DSA:3.30.300.30 445 550 7.7E-7 T 14-10-2018 C4901_16790 3ceb11e8bf53884e1a113a47b5c959f7 566 SUPERFAMILY SSF56801 8 554 1.96E-117 T 14-10-2018 C4901_16790 3ceb11e8bf53884e1a113a47b5c959f7 566 Gene3D G3DSA:3.40.50.12780 7 306 7.3E-55 T 14-10-2018 C4901_16790 3ceb11e8bf53884e1a113a47b5c959f7 566 PRINTS PR00154 AMP-binding signature 177 185 2.8E-5 T 14-10-2018 IPR020459 AMP-binding C4901_16790 3ceb11e8bf53884e1a113a47b5c959f7 566 PRINTS PR00154 AMP-binding signature 165 176 2.8E-5 T 14-10-2018 IPR020459 AMP-binding C4901_16790 3ceb11e8bf53884e1a113a47b5c959f7 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 170 181 - T 14-10-2018 IPR020845 AMP-binding, conserved site C4901_16790 3ceb11e8bf53884e1a113a47b5c959f7 566 Pfam PF00501 AMP-binding enzyme 19 448 6.7E-90 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C4901_16790 3ceb11e8bf53884e1a113a47b5c959f7 566 Gene3D G3DSA:3.40.50.12780 307 444 8.5E-35 T 14-10-2018 C4901_11065 e314c531a18ab5020d9c924fd761eb49 90 SUPERFAMILY SSF46955 13 57 4.58E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily C4901_11065 e314c531a18ab5020d9c924fd761eb49 90 Pfam PF12728 Helix-turn-helix domain 13 57 2.0E-6 T 14-10-2018 C4901_15855 68c9b441aeb1ac78384ad51e57edbb82 127 SMART SM00360 16 89 6.9E-17 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 C4901_15855 68c9b441aeb1ac78384ad51e57edbb82 127 Gene3D G3DSA:3.30.70.330 11 120 9.5E-18 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily C4901_15855 68c9b441aeb1ac78384ad51e57edbb82 127 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 17 85 2.4E-15 T 14-10-2018 IPR000504 RNA recognition motif domain GO:0003676 C4901_15855 68c9b441aeb1ac78384ad51e57edbb82 127 SUPERFAMILY SSF54928 14 104 1.01E-19 T 14-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 C4901_07700 561f45df4793fd7866e0ac8245d60ba0 202 SUPERFAMILY SSF52218 1 198 2.23E-65 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C4901_07700 561f45df4793fd7866e0ac8245d60ba0 202 Pfam PF03358 NADPH-dependent FMN reductase 13 142 1.2E-11 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 C4901_07700 561f45df4793fd7866e0ac8245d60ba0 202 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 198 4.6E-94 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 C4901_07700 561f45df4793fd7866e0ac8245d60ba0 202 Gene3D G3DSA:3.40.50.360 1 200 2.0E-78 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C4901_07700 561f45df4793fd7866e0ac8245d60ba0 202 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 200 48.407 T 14-10-2018 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 C4901_11330 87b7b21173679e8dddb79bb9e1861023 388 SUPERFAMILY SSF56112 15 185 3.83E-28 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_11330 87b7b21173679e8dddb79bb9e1861023 388 Pfam PF00069 Protein kinase domain 31 158 7.6E-17 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 C4901_11330 87b7b21173679e8dddb79bb9e1861023 388 Gene3D G3DSA:1.10.510.10 19 176 1.2E-23 T 14-10-2018 C4901_12000 54e64a007f0f6f237c078c783149b575 371 Pfam PF00953 Glycosyl transferase family 4 101 253 7.1E-29 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 C4901_03295 fd56098fe8ae52d8afa3920a4b933fcc 315 Pfam PF00106 short chain dehydrogenase 15 204 1.8E-34 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_03295 fd56098fe8ae52d8afa3920a4b933fcc 315 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 153 181 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C4901_03295 fd56098fe8ae52d8afa3920a4b933fcc 315 Gene3D G3DSA:3.40.50.720 3 246 3.0E-54 T 14-10-2018 C4901_03295 fd56098fe8ae52d8afa3920a4b933fcc 315 SUPERFAMILY SSF51735 10 240 1.42E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_03295 fd56098fe8ae52d8afa3920a4b933fcc 315 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 185 3.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_03295 fd56098fe8ae52d8afa3920a4b933fcc 315 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 187 204 3.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_03295 fd56098fe8ae52d8afa3920a4b933fcc 315 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 3.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_03295 fd56098fe8ae52d8afa3920a4b933fcc 315 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 3.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_08945 779d7a58128fd19f10999739d6fce923 72 Pfam PF11755 Protein of unknown function (DUF3311) 12 68 2.2E-18 T 14-10-2018 IPR021741 Protein of unknown function DUF3311 C4901_05420 b04423d0852a83e7921c0dfddc9e3318 253 SUPERFAMILY SSF53167 48 179 9.69E-21 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 C4901_05420 b04423d0852a83e7921c0dfddc9e3318 253 Gene3D G3DSA:3.40.50.1580 47 185 5.6E-18 T 14-10-2018 C4901_05420 b04423d0852a83e7921c0dfddc9e3318 253 Pfam PF01048 Phosphorylase superfamily 50 182 4.5E-17 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 C4901_14925 b694711cc4cb7c425368920868a01bc7 364 Gene3D G3DSA:3.30.1490.20 102 171 3.6E-25 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_14925 b694711cc4cb7c425368920868a01bc7 364 SUPERFAMILY SSF51246 296 356 3.45E-14 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C4901_14925 b694711cc4cb7c425368920868a01bc7 364 Gene3D G3DSA:3.40.50.20 1 101 5.1E-31 T 14-10-2018 C4901_14925 b694711cc4cb7c425368920868a01bc7 364 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 347 2.2E-110 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 C4901_14925 b694711cc4cb7c425368920868a01bc7 364 Gene3D G3DSA:3.30.470.20 172 361 7.8E-66 T 14-10-2018 C4901_14925 b694711cc4cb7c425368920868a01bc7 364 Pfam PF02222 ATP-grasp domain 106 272 8.4E-52 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type C4901_14925 b694711cc4cb7c425368920868a01bc7 364 SUPERFAMILY SSF52440 2 95 1.29E-19 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_14925 b694711cc4cb7c425368920868a01bc7 364 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 2 344 39.703 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 C4901_14925 b694711cc4cb7c425368920868a01bc7 364 SUPERFAMILY SSF56059 97 292 9.37E-58 T 14-10-2018 C4901_15345 8c1f32bac7ef0eb4b00059c761806870 1093 Pfam PF08751 TrwC relaxase 33 316 1.9E-71 T 14-10-2018 IPR014862 TrwC relaxase C4901_15345 8c1f32bac7ef0eb4b00059c761806870 1093 Gene3D G3DSA:2.30.30.940 912 977 3.7E-5 T 14-10-2018 C4901_15345 8c1f32bac7ef0eb4b00059c761806870 1093 Pfam PF13604 AAA domain 575 747 3.0E-48 T 14-10-2018 C4901_15345 8c1f32bac7ef0eb4b00059c761806870 1093 Gene3D G3DSA:3.40.50.300 542 738 1.2E-34 T 14-10-2018 C4901_15345 8c1f32bac7ef0eb4b00059c761806870 1093 SUPERFAMILY SSF52540 685 1036 2.12E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15345 8c1f32bac7ef0eb4b00059c761806870 1093 SUPERFAMILY SSF55464 23 320 4.21E-68 T 14-10-2018 C4901_15345 8c1f32bac7ef0eb4b00059c761806870 1093 SUPERFAMILY SSF52540 535 710 1.39E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15345 8c1f32bac7ef0eb4b00059c761806870 1093 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 35 319 1.2E-63 T 14-10-2018 IPR014059 Conjugative relaxase, N-terminal C4901_01765 0bf9ebaba75c63ee71f63d2a9dfa90ea 304 Gene3D G3DSA:3.30.420.40 54 174 5.4E-11 T 14-10-2018 C4901_01765 0bf9ebaba75c63ee71f63d2a9dfa90ea 304 Gene3D G3DSA:3.30.1490.300 80 137 5.4E-11 T 14-10-2018 C4901_01765 0bf9ebaba75c63ee71f63d2a9dfa90ea 304 Gene3D G3DSA:3.30.420.40 175 214 5.4E-11 T 14-10-2018 C4901_01765 0bf9ebaba75c63ee71f63d2a9dfa90ea 304 SUPERFAMILY SSF53067 48 163 4.53E-8 T 14-10-2018 C4901_06565 17211c99510d4d4d73027f522ef3652b 365 Pfam PF00535 Glycosyl transferase family 2 66 172 1.7E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_06565 17211c99510d4d4d73027f522ef3652b 365 SUPERFAMILY SSF53448 64 277 2.44E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_06565 17211c99510d4d4d73027f522ef3652b 365 Gene3D G3DSA:3.90.550.10 28 299 4.7E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_00035 76bb088ba5c50c86cc60cc7a361c8aa9 220 Pfam PF02390 Putative methyltransferase 50 183 2.7E-40 T 14-10-2018 C4901_00035 76bb088ba5c50c86cc60cc7a361c8aa9 220 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 41 180 1.0E-37 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 C4901_00035 76bb088ba5c50c86cc60cc7a361c8aa9 220 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 12 216 26.719 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 C4901_00035 76bb088ba5c50c86cc60cc7a361c8aa9 220 Gene3D G3DSA:3.40.50.150 22 218 9.9E-50 T 14-10-2018 C4901_00035 76bb088ba5c50c86cc60cc7a361c8aa9 220 SUPERFAMILY SSF53335 47 205 6.78E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 SUPERFAMILY SSF51161 77 361 2.21E-71 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 52 374 2.3E-107 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 46 371 34.767 T 14-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 Gene3D G3DSA:2.160.10.10 144 352 8.3E-59 T 14-10-2018 C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 67 133 2.2E-16 T 14-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 190 224 1.9E-9 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 303 337 2.4E-5 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 302 4.5E-4 T 14-10-2018 IPR001451 Hexapeptide repeat C4901_10390 4237d13c23376fe22c81deb63cba8a93 391 Gene3D G3DSA:3.40.1390.10 39 141 8.1E-23 T 14-10-2018 C4901_07690 f7aeb588bf078ba6c506078460ff24f8 253 SUPERFAMILY SSF48498 113 223 8.31E-13 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C4901_07690 f7aeb588bf078ba6c506078460ff24f8 253 SUPERFAMILY SSF46689 35 105 1.1E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_07690 f7aeb588bf078ba6c506078460ff24f8 253 Gene3D G3DSA:1.10.357.10 42 224 5.3E-32 T 14-10-2018 C4901_07690 f7aeb588bf078ba6c506078460ff24f8 253 Pfam PF00440 Bacterial regulatory proteins, tetR family 46 89 9.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_07690 f7aeb588bf078ba6c506078460ff24f8 253 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 67 90 4.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_07690 f7aeb588bf078ba6c506078460ff24f8 253 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 59 4.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_04530 ad1c5e0e144d848879570ae3dd30a72b 262 Gene3D G3DSA:3.20.20.20 1 256 2.9E-93 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C4901_04530 ad1c5e0e144d848879570ae3dd30a72b 262 Pfam PF00809 Pterin binding enzyme 1 239 1.0E-75 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C4901_04530 ad1c5e0e144d848879570ae3dd30a72b 262 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C4901_04530 ad1c5e0e144d848879570ae3dd30a72b 262 SUPERFAMILY SSF51717 1 256 8.9E-88 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 C4901_04530 ad1c5e0e144d848879570ae3dd30a72b 262 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 253 2.1E-86 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 Gene3D G3DSA:3.40.50.720 4 245 6.2E-70 T 14-10-2018 C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 242 1.0E-49 T 14-10-2018 C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 SUPERFAMILY SSF51735 8 245 3.04E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15825 aa53c54dd14c049bc6d99d279048fa1b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 1.4E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_10145 2b80620f66e49bf7b5624883fa7347c8 138 PRINTS PR00606 Class ID cytochrome C signature 50 63 1.7E-10 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_10145 2b80620f66e49bf7b5624883fa7347c8 138 PRINTS PR00606 Class ID cytochrome C signature 88 101 1.7E-10 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_10145 2b80620f66e49bf7b5624883fa7347c8 138 PRINTS PR00606 Class ID cytochrome C signature 65 78 1.7E-10 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_10145 2b80620f66e49bf7b5624883fa7347c8 138 PRINTS PR00606 Class ID cytochrome C signature 107 117 1.7E-10 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_10145 2b80620f66e49bf7b5624883fa7347c8 138 PRINTS PR00606 Class ID cytochrome C signature 119 129 1.7E-10 T 14-10-2018 IPR002324 Cytochrome c, class ID GO:0005506|GO:0009055|GO:0020037 C4901_10145 2b80620f66e49bf7b5624883fa7347c8 138 Gene3D G3DSA:1.10.760.10 47 130 6.2E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_10145 2b80620f66e49bf7b5624883fa7347c8 138 SUPERFAMILY SSF46626 52 130 1.42E-9 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 Pfam PF00231 ATP synthase 5 285 1.4E-89 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 272 285 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 Gene3D G3DSA:1.10.287.80 6 282 1.8E-100 T 14-10-2018 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 SUPERFAMILY SSF52943 3 286 6.41E-86 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 Gene3D G3DSA:3.40.1380.10 61 205 1.8E-100 T 14-10-2018 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 PRINTS PR00126 ATP synthase gamma subunit signature 264 285 1.6E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 PRINTS PR00126 ATP synthase gamma subunit signature 233 252 1.6E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.6E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.6E-34 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 286 34.2 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_17000 9835cbdf748792f9d11e9c6f247fef73 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 286 1.6E-99 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_03535 ecb81b5066ed3d08c9e2d6823b25e539 217 Pfam PF00484 Carbonic anhydrase 36 119 3.0E-7 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 C4901_03535 ecb81b5066ed3d08c9e2d6823b25e539 217 Gene3D G3DSA:3.40.1050.10 8 187 2.2E-50 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 C4901_03535 ecb81b5066ed3d08c9e2d6823b25e539 217 SUPERFAMILY SSF53056 15 187 1.96E-27 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 C4901_03535 ecb81b5066ed3d08c9e2d6823b25e539 217 SMART SM00947 26 190 4.7E-8 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 C4901_11105 928edfd7b7a759a20754cea0c6591b0f 341 Gene3D G3DSA:1.10.443.10 130 310 2.4E-34 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_11105 928edfd7b7a759a20754cea0c6591b0f 341 SUPERFAMILY SSF56349 29 306 8.83E-58 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_11105 928edfd7b7a759a20754cea0c6591b0f 341 Gene3D G3DSA:1.10.150.130 27 126 2.2E-8 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_11105 928edfd7b7a759a20754cea0c6591b0f 341 Pfam PF00589 Phage integrase family 131 300 2.1E-32 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_10675 0c6702ab3493e80ea8e1a05692019bea 233 SUPERFAMILY SSF53474 7 230 7.6E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_10675 0c6702ab3493e80ea8e1a05692019bea 233 Pfam PF12697 Alpha/beta hydrolase family 13 224 3.0E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_10675 0c6702ab3493e80ea8e1a05692019bea 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 36 51 4.5E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_10675 0c6702ab3493e80ea8e1a05692019bea 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 80 93 4.5E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_10675 0c6702ab3493e80ea8e1a05692019bea 233 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 4.5E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_10675 0c6702ab3493e80ea8e1a05692019bea 233 Gene3D G3DSA:3.40.50.1820 2 231 3.2E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_03435 3522bfc47d09a90e5613932abd961e2e 303 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 291 1.3E-117 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C4901_03435 3522bfc47d09a90e5613932abd961e2e 303 SUPERFAMILY SSF54211 133 277 1.06E-53 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_03435 3522bfc47d09a90e5613932abd961e2e 303 Gene3D G3DSA:3.30.1700.10 128 302 2.0E-67 T 14-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C4901_03435 3522bfc47d09a90e5613932abd961e2e 303 Gene3D G3DSA:3.30.230.20 1 127 3.5E-50 T 14-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C4901_03435 3522bfc47d09a90e5613932abd961e2e 303 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 279 46.983 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C4901_03435 3522bfc47d09a90e5613932abd961e2e 303 SUPERFAMILY SSF54211 3 124 1.82E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_03435 3522bfc47d09a90e5613932abd961e2e 303 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 275 3.9E-109 T 14-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 C4901_00115 c28cd6e1f5782e913bd9c2dc0776e15d 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.703 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C4901_00115 c28cd6e1f5782e913bd9c2dc0776e15d 91 PIRSF PIRSF029827 1 90 1.4E-40 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C4901_00115 c28cd6e1f5782e913bd9c2dc0776e15d 91 SUPERFAMILY SSF111148 1 90 3.27E-40 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 C4901_00115 c28cd6e1f5782e913bd9c2dc0776e15d 91 Gene3D G3DSA:1.10.3880.10 1 90 2.1E-40 T 14-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 C4901_00115 c28cd6e1f5782e913bd9c2dc0776e15d 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 75 4.0E-28 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C4901_00115 c28cd6e1f5782e913bd9c2dc0776e15d 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 4.9E-43 T 14-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 C4901_07285 58d5890c9d4333082059ed59376e0c91 681 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 127 502 9.7E-70 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain C4901_07285 58d5890c9d4333082059ed59376e0c91 681 SUPERFAMILY SSF52540 132 517 3.04E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07285 58d5890c9d4333082059ed59376e0c91 681 Gene3D G3DSA:3.40.50.300 306 546 1.7E-36 T 14-10-2018 C4901_07285 58d5890c9d4333082059ed59376e0c91 681 Gene3D G3DSA:3.40.50.300 90 230 3.1E-20 T 14-10-2018 C4901_12410 810a3490af367fb370989dca167f7456 343 SUPERFAMILY SSF51556 9 335 3.85E-82 T 14-10-2018 IPR032466 Metal-dependent hydrolase C4901_12410 810a3490af367fb370989dca167f7456 343 Hamap MF_01962 Adenine deaminase. 11 323 79.116 T 14-10-2018 IPR028892 Adenine deaminase type 2 GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 C4901_12410 810a3490af367fb370989dca167f7456 343 Gene3D G3DSA:3.20.20.140 5 339 1.6E-102 T 14-10-2018 C4901_12410 810a3490af367fb370989dca167f7456 343 Pfam PF00962 Adenosine/AMP deaminase 15 331 8.4E-73 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 C4901_12410 810a3490af367fb370989dca167f7456 343 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 16 333 1.8E-111 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 C4901_14170 54d10373c4c15aff353592f4006226c6 172 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 160 26.238 T 14-10-2018 IPR022973 Ribosomal protein L10 C4901_14170 54d10373c4c15aff353592f4006226c6 172 Pfam PF00466 Ribosomal protein L10 5 99 2.4E-25 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 C4901_14170 54d10373c4c15aff353592f4006226c6 172 Gene3D G3DSA:3.30.70.1730 4 132 7.7E-37 T 14-10-2018 C4901_14170 54d10373c4c15aff353592f4006226c6 172 SUPERFAMILY SSF160369 4 170 1.96E-54 T 14-10-2018 C4901_14170 54d10373c4c15aff353592f4006226c6 172 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_05390 fed2a408bdcb3ab8dd09a20824340f7d 472 Gene3D G3DSA:3.80.30.20 196 409 4.9E-25 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C4901_05390 fed2a408bdcb3ab8dd09a20824340f7d 472 SMART SM00729 197 409 8.3E-33 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_05390 fed2a408bdcb3ab8dd09a20824340f7d 472 SUPERFAMILY SSF102114 160 432 4.32E-48 T 14-10-2018 C4901_05390 fed2a408bdcb3ab8dd09a20824340f7d 472 TIGRFAM TIGR03471 HpnJ: hopanoid biosynthesis associated radical SAM protein HpnJ 2 472 1.1E-247 T 14-10-2018 IPR017834 Hopanoid biosynthesis associated radical SAM protein HpnJ C4901_05390 fed2a408bdcb3ab8dd09a20824340f7d 472 Pfam PF04055 Radical SAM superfamily 203 362 9.3E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_04035 5f87a2a1e82b8b865337cedc56e1c4f7 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 4.8E-25 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_04035 5f87a2a1e82b8b865337cedc56e1c4f7 78 SUPERFAMILY SSF143800 2 75 4.51E-30 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04035 5f87a2a1e82b8b865337cedc56e1c4f7 78 Gene3D G3DSA:2.30.170.40 2 78 5.1E-32 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04035 5f87a2a1e82b8b865337cedc56e1c4f7 78 Pfam PF00830 Ribosomal L28 family 3 62 3.1E-26 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04035 5f87a2a1e82b8b865337cedc56e1c4f7 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 20.423 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_12510 72063aaf7cf2ed26fcb3cff08303d02e 187 Pfam PF03918 Cytochrome C biogenesis protein 54 183 1.5E-35 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family C4901_12510 72063aaf7cf2ed26fcb3cff08303d02e 187 Gene3D G3DSA:1.10.8.640 53 132 5.3E-25 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily C4901_03150 b41a2bdf44c4afb0a22cee08501f5b4b 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 1.7E-61 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C4901_03150 b41a2bdf44c4afb0a22cee08501f5b4b 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C4901_03150 b41a2bdf44c4afb0a22cee08501f5b4b 195 Gene3D G3DSA:3.30.230.40 90 195 1.0E-37 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 C4901_03150 b41a2bdf44c4afb0a22cee08501f5b4b 195 Gene3D G3DSA:3.30.230.40 1 89 7.2E-33 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 C4901_03150 b41a2bdf44c4afb0a22cee08501f5b4b 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 195 41.197 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C4901_03150 b41a2bdf44c4afb0a22cee08501f5b4b 195 SUPERFAMILY SSF54211 2 85 3.67E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_03150 b41a2bdf44c4afb0a22cee08501f5b4b 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 C4901_03150 b41a2bdf44c4afb0a22cee08501f5b4b 195 SUPERFAMILY SSF54211 87 178 1.77E-33 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_02920 c05471f7c6fe284d66189c1636d653cf 122 Pfam PF12635 Protein of unknown function (DUF3780) 34 115 1.4E-13 T 14-10-2018 IPR024220 Protein of unknown function DUF3780 C4901_04820 0b53cbb8d57eda92cfb229e93522295f 176 Gene3D G3DSA:3.30.310.70 42 165 3.5E-5 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_04820 0b53cbb8d57eda92cfb229e93522295f 176 SUPERFAMILY SSF103247 42 165 1.26E-18 T 14-10-2018 IPR035923 TT1751-like domain superfamily C4901_05170 ff62be4d0995c93f18415f5d2065ef75 145 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 93 2.2E-12 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C4901_05170 ff62be4d0995c93f18415f5d2065ef75 145 Gene3D G3DSA:3.10.50.40 2 144 1.3E-33 T 14-10-2018 C4901_05170 ff62be4d0995c93f18415f5d2065ef75 145 SUPERFAMILY SSF54534 4 142 4.12E-30 T 14-10-2018 C4901_15285 2cad0c38ffea7ee6d0bc69b4eebd31c0 326 PIRSF PIRSF037112 21 319 1.9E-101 T 14-10-2018 IPR017113 Antirestriction, ArdC C4901_15285 2cad0c38ffea7ee6d0bc69b4eebd31c0 326 Pfam PF08401 Domain of unknown function (DUF1738) 31 147 8.0E-33 T 14-10-2018 IPR013610 Domain of unknown function DUF1738 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 Gene3D G3DSA:1.10.300.10 102 201 9.7E-94 T 14-10-2018 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 Gene3D G3DSA:3.90.170.10 267 431 4.2E-70 T 14-10-2018 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 SUPERFAMILY SSF52540 3 430 2.87E-171 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 Pfam PF00709 Adenylosuccinate synthetase 5 423 1.5E-173 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 429 5.3E-178 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 431 205.917 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 SMART SM00788 4 424 1.4E-283 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 C4901_08680 df340137c2fbe59a0a12ee286c3d53db 431 Gene3D G3DSA:3.40.440.10 6 249 9.7E-94 T 14-10-2018 C4901_05045 bb5019af82d87c8e725560a41fe0ec8f 195 Pfam PF01385 Probable transposase 5 50 1.1E-7 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C4901_12720 069713fd59729ef4967f1d9df19a3a24 166 Pfam PF13710 ACT domain 13 72 3.7E-15 T 14-10-2018 C4901_12720 069713fd59729ef4967f1d9df19a3a24 166 SUPERFAMILY SSF55021 1 75 5.12E-22 T 14-10-2018 C4901_12720 069713fd59729ef4967f1d9df19a3a24 166 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 2.6E-63 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C4901_12720 069713fd59729ef4967f1d9df19a3a24 166 Gene3D G3DSA:3.30.70.1150 83 161 3.3E-28 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal C4901_12720 069713fd59729ef4967f1d9df19a3a24 166 SUPERFAMILY SSF55021 79 158 2.9E-25 T 14-10-2018 C4901_12720 069713fd59729ef4967f1d9df19a3a24 166 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 63 1.0E-24 T 14-10-2018 C4901_12720 069713fd59729ef4967f1d9df19a3a24 166 Gene3D G3DSA:3.30.70.260 1 79 4.4E-35 T 14-10-2018 C4901_12720 069713fd59729ef4967f1d9df19a3a24 166 Pfam PF10369 Small subunit of acetolactate synthase 84 157 3.8E-26 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 C4901_02190 872e8d9c9b404ffe880040e01ea93d74 292 SUPERFAMILY SSF53335 35 290 4.3E-69 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_02190 872e8d9c9b404ffe880040e01ea93d74 292 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 60 286 2.6E-57 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 C4901_02190 872e8d9c9b404ffe880040e01ea93d74 292 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 28 283 34.311 T 14-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 C4901_02190 872e8d9c9b404ffe880040e01ea93d74 292 Gene3D G3DSA:3.40.50.150 28 292 3.3E-84 T 14-10-2018 C4901_03625 d72b778579167b6f3179c12a1605f3db 735 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 9 724 5.6E-295 T 14-10-2018 C4901_03625 d72b778579167b6f3179c12a1605f3db 735 Gene3D G3DSA:1.10.268.10 369 454 1.1E-172 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C4901_03625 d72b778579167b6f3179c12a1605f3db 735 SMART SM00434 11 461 3.9E-224 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_03625 d72b778579167b6f3179c12a1605f3db 735 SUPERFAMILY SSF101904 500 727 7.85E-37 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C4901_03625 d72b778579167b6f3179c12a1605f3db 735 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 4 732 31.871 T 14-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 C4901_03625 d72b778579167b6f3179c12a1605f3db 735 Gene3D G3DSA:3.90.199.10 32 481 1.1E-172 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 C4901_03625 d72b778579167b6f3179c12a1605f3db 735 Gene3D G3DSA:2.120.10.90 499 724 7.5E-12 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal C4901_03625 d72b778579167b6f3179c12a1605f3db 735 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 466 2.1E-130 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 C4901_03625 d72b778579167b6f3179c12a1605f3db 735 SUPERFAMILY SSF56719 31 482 2.75E-151 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 C4901_03625 d72b778579167b6f3179c12a1605f3db 735 Gene3D G3DSA:3.30.1360.40 238 331 1.1E-172 T 14-10-2018 C4901_08815 56c23381e6a4c786177922d9be3a813b 59 SUPERFAMILY SSF57829 2 55 3.97E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 C4901_08815 56c23381e6a4c786177922d9be3a813b 59 Pfam PF01783 Ribosomal L32p protein family 2 55 1.0E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08815 56c23381e6a4c786177922d9be3a813b 59 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 4.8E-20 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08815 56c23381e6a4c786177922d9be3a813b 59 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 18.075 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 Gene3D G3DSA:1.10.8.280 289 404 6.6E-237 T 14-10-2018 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 938 22.385 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 Gene3D G3DSA:1.20.1580.10 90 493 6.6E-237 T 14-10-2018 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 Gene3D G3DSA:1.20.1580.10 691 828 1.9E-139 T 14-10-2018 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 Gene3D G3DSA:3.40.50.300 613 934 1.9E-139 T 14-10-2018 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 4 923 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 SUPERFAMILY SSF52540 1 570 3.64E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 Gene3D G3DSA:3.30.190.20 130 246 6.6E-237 T 14-10-2018 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 SUPERFAMILY SSF52540 618 909 3.47E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 Pfam PF00005 ABC transporter 790 858 7.7E-6 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_13970 75dd1638c5ac2151ab57b2e6e0182adb 958 Gene3D G3DSA:3.40.50.300 6 595 6.6E-237 T 14-10-2018 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 68 124 3.7E-25 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 85 110 6.6E-65 T 14-10-2018 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 113 133 6.6E-65 T 14-10-2018 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 258 284 6.6E-65 T 14-10-2018 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 160 181 6.6E-65 T 14-10-2018 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 236 257 6.6E-65 T 14-10-2018 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 431 450 6.6E-65 T 14-10-2018 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 326 338 6.6E-65 T 14-10-2018 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 61 85 3.1E-10 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 276 298 3.1E-10 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 87 107 3.1E-10 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 430 452 3.1E-10 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 7 649 4.4E-231 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04610 02d0dec28a468945d4256b574c9621ef 653 Pfam PF00361 Proton-conducting membrane transporter 136 419 2.6E-87 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02035 135503dc78692ae996bef0644954b0d7 304 TIGRFAM TIGR02580 cas_RAMP_Cmr4: CRISPR type III-B/RAMP module RAMP protein Cmr4 7 297 1.7E-62 T 14-10-2018 IPR013410 CRISPR-associated RAMP Cmr4 C4901_02035 135503dc78692ae996bef0644954b0d7 304 Pfam PF03787 RAMP superfamily 9 297 9.4E-32 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein C4901_07005 682c2b69e44e9721fa5082d2326fe91b 743 SUPERFAMILY SSF53448 135 424 2.95E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_07005 682c2b69e44e9721fa5082d2326fe91b 743 Gene3D G3DSA:3.90.550.10 132 362 4.7E-12 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_07005 682c2b69e44e9721fa5082d2326fe91b 743 Pfam PF13632 Glycosyl transferase family group 2 234 472 3.9E-15 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_06905 811c925f87ca6f776813e53d238e3877 146 SUPERFAMILY SSF110849 26 108 1.73E-13 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily C4901_06905 811c925f87ca6f776813e53d238e3877 146 Gene3D G3DSA:3.90.1530.30 40 106 2.7E-10 T 14-10-2018 C4901_06905 811c925f87ca6f776813e53d238e3877 146 SMART SM00470 26 119 5.5E-8 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C4901_06905 811c925f87ca6f776813e53d238e3877 146 Pfam PF02195 ParB-like nuclease domain 28 115 2.1E-13 T 14-10-2018 IPR003115 ParB/Sulfiredoxin C4901_13830 1c6d549f8c47bb42261f0a97f0e64eab 197 SUPERFAMILY SSF53474 1 165 1.09E-14 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_04575 17a3fcbb000af8db90873809e995d231 176 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 31 175 1.9E-58 T 14-10-2018 C4901_04575 17a3fcbb000af8db90873809e995d231 176 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 30 175 4.7E-62 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04575 17a3fcbb000af8db90873809e995d231 176 Gene3D G3DSA:3.40.30.10 93 173 2.8E-31 T 14-10-2018 C4901_04575 17a3fcbb000af8db90873809e995d231 176 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 133 151 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04575 17a3fcbb000af8db90873809e995d231 176 SUPERFAMILY SSF52833 22 175 1.68E-58 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_04575 17a3fcbb000af8db90873809e995d231 176 PIRSF PIRSF000216 9 176 6.6E-67 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04575 17a3fcbb000af8db90873809e995d231 176 Gene3D G3DSA:1.10.10.1590 21 92 6.9E-27 T 14-10-2018 C4901_01270 cd01afe370856da42bda279a3f3fd2d8 231 TIGRFAM TIGR02495 NrdG2: anaerobic ribonucleoside-triphosphate reductase activating protein 7 182 5.0E-51 T 14-10-2018 IPR012840 Anaerobic ribonucleoside-triphosphate reductase activating protein C4901_01270 cd01afe370856da42bda279a3f3fd2d8 231 SUPERFAMILY SSF102114 19 199 9.81E-19 T 14-10-2018 C4901_01270 cd01afe370856da42bda279a3f3fd2d8 231 Pfam PF04055 Radical SAM superfamily 27 166 3.7E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_01270 cd01afe370856da42bda279a3f3fd2d8 231 Pfam PF13353 4Fe-4S single cluster domain 22 110 1.9E-9 T 14-10-2018 C4901_01270 cd01afe370856da42bda279a3f3fd2d8 231 Gene3D G3DSA:3.20.20.70 6 203 1.1E-28 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_06620 548ad760d0415d3f1fc42cb93eaf70d1 167 Pfam PF01610 Transposase 24 146 3.1E-24 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_12505 ac386fd2e6f931721868a326202c6e17 312 SUPERFAMILY SSF48452 163 268 7.34E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_12505 ac386fd2e6f931721868a326202c6e17 312 Gene3D G3DSA:1.25.40.10 150 285 2.6E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_00510 bf73702063206faec04bba374dbab971 101 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 66 86 2.6E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_00510 bf73702063206faec04bba374dbab971 101 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 49 66 2.6E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_00510 bf73702063206faec04bba374dbab971 101 SUPERFAMILY SSF46689 13 85 6.27E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_00510 bf73702063206faec04bba374dbab971 101 Gene3D G3DSA:1.10.10.60 2 85 2.2E-23 T 14-10-2018 C4901_00510 bf73702063206faec04bba374dbab971 101 Pfam PF02954 Bacterial regulatory protein, Fis family 44 81 7.2E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 C4901_00510 bf73702063206faec04bba374dbab971 101 PIRSF PIRSF002097 2 86 5.0E-29 T 14-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 C4901_16370 e1fbd082684ff02d3249bf6acc344ce8 320 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_16370 e1fbd082684ff02d3249bf6acc344ce8 320 Pfam PF00005 ABC transporter 29 169 9.9E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_16370 e1fbd082684ff02d3249bf6acc344ce8 320 Gene3D G3DSA:3.40.50.300 6 245 6.6E-60 T 14-10-2018 C4901_16370 e1fbd082684ff02d3249bf6acc344ce8 320 SMART SM00382 37 219 5.5E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_16370 e1fbd082684ff02d3249bf6acc344ce8 320 SUPERFAMILY SSF52540 8 218 2.26E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00585 c3dd0240e6b2deca6ec5afae7f0019e4 455 Gene3D G3DSA:3.30.300.30 344 452 4.8E-11 T 14-10-2018 C4901_00585 c3dd0240e6b2deca6ec5afae7f0019e4 455 Pfam PF13193 AMP-binding enzyme C-terminal domain 360 433 5.0E-6 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain C4901_00585 c3dd0240e6b2deca6ec5afae7f0019e4 455 SUPERFAMILY SSF56801 47 446 3.66E-45 T 14-10-2018 C4901_00585 c3dd0240e6b2deca6ec5afae7f0019e4 455 Gene3D G3DSA:3.40.50.12780 129 343 9.9E-25 T 14-10-2018 C4901_00585 c3dd0240e6b2deca6ec5afae7f0019e4 455 Pfam PF00501 AMP-binding enzyme 126 293 1.0E-17 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 C4901_05120 fb612557f065ed6d57f91a2c05cce49d 110 SUPERFAMILY SSF141091 1 100 1.19E-33 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05120 fb612557f065ed6d57f91a2c05cce49d 110 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 4.0E-37 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05120 fb612557f065ed6d57f91a2c05cce49d 110 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 25.427 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05120 fb612557f065ed6d57f91a2c05cce49d 110 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 8.9E-34 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_05120 fb612557f065ed6d57f91a2c05cce49d 110 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_01130 27e8078f87993e9e01d2a28c46b3cb61 313 Pfam PF01636 Phosphotransferase enzyme family 9 237 1.6E-28 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase C4901_01130 27e8078f87993e9e01d2a28c46b3cb61 313 Gene3D G3DSA:3.90.1200.10 78 312 1.4E-72 T 14-10-2018 C4901_01130 27e8078f87993e9e01d2a28c46b3cb61 313 SUPERFAMILY SSF56112 7 297 1.93E-48 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_01130 27e8078f87993e9e01d2a28c46b3cb61 313 Gene3D G3DSA:3.30.200.20 2 77 4.5E-19 T 14-10-2018 C4901_01335 ddcd60d3ac2213d1d8f5ab78ac00ab18 457 SUPERFAMILY SSF102114 6 445 4.97E-125 T 14-10-2018 C4901_01335 ddcd60d3ac2213d1d8f5ab78ac00ab18 457 Gene3D G3DSA:3.80.30.20 2 364 1.3E-111 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C4901_01335 ddcd60d3ac2213d1d8f5ab78ac00ab18 457 SMART SM00729 50 270 5.2E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_01335 ddcd60d3ac2213d1d8f5ab78ac00ab18 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 4 457 7.2E-162 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 C4901_01335 ddcd60d3ac2213d1d8f5ab78ac00ab18 457 Pfam PF04055 Radical SAM superfamily 55 229 5.2E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_01335 ddcd60d3ac2213d1d8f5ab78ac00ab18 457 PIRSF PIRSF000167 2 456 5.1E-154 T 14-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 C4901_01335 ddcd60d3ac2213d1d8f5ab78ac00ab18 457 Gene3D G3DSA:1.10.10.920 365 457 2.1E-30 T 14-10-2018 C4901_01335 ddcd60d3ac2213d1d8f5ab78ac00ab18 457 Pfam PF06969 HemN C-terminal domain 364 431 6.1E-10 T 14-10-2018 IPR010723 HemN, C-terminal C4901_07040 ee7cc63af5ee0a9e3a3b17e884e894db 405 Pfam PF08388 Group II intron, maturase-specific domain 273 347 3.6E-19 T 14-10-2018 IPR013597 Group II intron, maturase-specific C4901_07040 ee7cc63af5ee0a9e3a3b17e884e894db 405 SUPERFAMILY SSF56672 1 344 3.43E-58 T 14-10-2018 C4901_07040 ee7cc63af5ee0a9e3a3b17e884e894db 405 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 3 337 5.1E-112 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase C4901_07040 ee7cc63af5ee0a9e3a3b17e884e894db 405 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 47 257 2.4E-37 T 14-10-2018 IPR000477 Reverse transcriptase domain C4901_13265 975a95c16ea6e8c9544ec3a4aaa56b87 267 Pfam PF13557 Putative MetA-pathway of phenol degradation 42 246 5.2E-7 T 14-10-2018 IPR025737 MetA-pathway of phenol degradation, putative C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 SUPERFAMILY SSF55785 33 125 2.51E-7 T 14-10-2018 IPR035965 PAS domain superfamily C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 Gene3D G3DSA:1.10.287.130 166 223 1.7E-13 T 14-10-2018 C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 SUPERFAMILY SSF55874 229 375 1.83E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 375 5.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 357 5.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 324 5.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 SMART SM00091 32 100 2.9E-5 T 14-10-2018 IPR000014 PAS domain C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 Gene3D G3DSA:3.30.450.20 31 131 2.5E-14 T 14-10-2018 C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 Gene3D G3DSA:3.30.565.10 225 377 6.9E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 Pfam PF00989 PAS fold 34 124 1.5E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 265 377 7.3E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 SUPERFAMILY SSF47384 153 218 1.96E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 SMART SM00387 265 378 1.7E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 SMART SM00388 162 219 6.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_01605 afc67e8e807c151ddb09dffcf7542ce1 384 Pfam PF00512 His Kinase A (phospho-acceptor) domain 163 217 5.2E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 C4901_04620 65ec5fae820107b21a9d292db66373d0 477 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 6 435 1.7E-140 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 C4901_04620 65ec5fae820107b21a9d292db66373d0 477 Pfam PF00361 Proton-conducting membrane transporter 121 415 1.9E-72 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04620 65ec5fae820107b21a9d292db66373d0 477 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 69 94 5.4E-9 T 14-10-2018 C4901_04620 65ec5fae820107b21a9d292db66373d0 477 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 212 233 5.4E-9 T 14-10-2018 C4901_04620 65ec5fae820107b21a9d292db66373d0 477 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 409 428 5.4E-9 T 14-10-2018 C4901_04620 65ec5fae820107b21a9d292db66373d0 477 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 2 466 18.106 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 C4901_14495 dbd8a73c870054f5cbaf5e6ece9e978c 184 Gene3D G3DSA:3.40.30.10 7 184 2.5E-41 T 14-10-2018 C4901_14495 dbd8a73c870054f5cbaf5e6ece9e978c 184 Pfam PF00578 AhpC/TSA family 12 130 4.5E-17 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_14495 dbd8a73c870054f5cbaf5e6ece9e978c 184 SUPERFAMILY SSF52833 6 183 1.86E-46 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_09510 c38d118989d982eb2ebe8a74208c0ba3 145 SUPERFAMILY SSF55120 5 143 1.83E-37 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_09510 c38d118989d982eb2ebe8a74208c0ba3 145 Gene3D G3DSA:3.30.2350.10 3 145 2.1E-43 T 14-10-2018 C4901_09510 c38d118989d982eb2ebe8a74208c0ba3 145 Pfam PF00849 RNA pseudouridylate synthase 6 79 2.3E-7 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 C4901_13475 60abf63801507953c33eae3745470e0d 154 Gene3D G3DSA:3.40.50.2300 6 150 1.7E-33 T 14-10-2018 C4901_13475 60abf63801507953c33eae3745470e0d 154 Pfam PF00072 Response regulator receiver domain 14 137 2.0E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_13475 60abf63801507953c33eae3745470e0d 154 SUPERFAMILY SSF52172 11 139 7.68E-30 T 14-10-2018 IPR011006 CheY-like superfamily C4901_13475 60abf63801507953c33eae3745470e0d 154 SMART SM00448 12 136 2.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_12840 365b6353c795441ebd3637394fbcfc8f 414 Gene3D G3DSA:3.30.450.90 57 159 2.2E-26 T 14-10-2018 C4901_12840 365b6353c795441ebd3637394fbcfc8f 414 Gene3D G3DSA:3.40.50.300 161 414 5.1E-82 T 14-10-2018 C4901_12840 365b6353c795441ebd3637394fbcfc8f 414 SMART SM00382 182 310 0.0018 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_12840 365b6353c795441ebd3637394fbcfc8f 414 SUPERFAMILY SSF52540 60 397 5.35E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12840 365b6353c795441ebd3637394fbcfc8f 414 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 62 406 7.3E-120 T 14-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 C4901_12840 365b6353c795441ebd3637394fbcfc8f 414 Pfam PF00437 Type II/IV secretion system protein 65 328 6.4E-38 T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_12840 365b6353c795441ebd3637394fbcfc8f 414 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 253 267 - T 14-10-2018 IPR001482 Type II/IV secretion system protein C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 131 1.1E-30 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 Gene3D G3DSA:2.60.15.10 1 89 2.2E-25 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 Gene3D G3DSA:1.20.5.440 90 132 4.3E-5 T 14-10-2018 C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 81 1.0E-18 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 SUPERFAMILY SSF51344 3 85 1.57E-20 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 19.397 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 88 131 1.6E-5 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 SUPERFAMILY SSF46604 88 135 9.94E-7 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_16990 e510eb669a5e22a7d3c71f51914453bb 147 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 8.9E-25 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 C4901_07770 2d10cb7851c1a9ccaf46ed999ec18ee3 338 Gene3D G3DSA:3.40.50.720 152 306 7.3E-106 T 14-10-2018 C4901_07770 2d10cb7851c1a9ccaf46ed999ec18ee3 338 SMART SM00829 15 334 1.5E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C4901_07770 2d10cb7851c1a9ccaf46ed999ec18ee3 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 134 4.5E-26 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C4901_07770 2d10cb7851c1a9ccaf46ed999ec18ee3 338 Pfam PF00107 Zinc-binding dehydrogenase 178 298 1.6E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C4901_07770 2d10cb7851c1a9ccaf46ed999ec18ee3 338 SUPERFAMILY SSF51735 144 304 4.42E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_07770 2d10cb7851c1a9ccaf46ed999ec18ee3 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 C4901_07770 2d10cb7851c1a9ccaf46ed999ec18ee3 338 SUPERFAMILY SSF50129 7 165 5.82E-42 T 14-10-2018 IPR011032 GroES-like superfamily C4901_07770 2d10cb7851c1a9ccaf46ed999ec18ee3 338 Gene3D G3DSA:3.90.180.10 15 334 7.3E-106 T 14-10-2018 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 SUPERFAMILY SSF50800 71 166 1.22E-24 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 Gene3D G3DSA:3.40.1380.20 336 469 3.8E-161 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 PRINTS PR01050 Pyruvate kinase family signature 217 243 7.1E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 PRINTS PR01050 Pyruvate kinase family signature 60 76 7.1E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 PRINTS PR01050 Pyruvate kinase family signature 294 312 7.1E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 PRINTS PR01050 Pyruvate kinase family signature 244 268 7.1E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 PRINTS PR01050 Pyruvate kinase family signature 313 329 7.1E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 PRINTS PR01050 Pyruvate kinase family signature 187 201 7.1E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 PRINTS PR01050 Pyruvate kinase family signature 269 293 7.1E-56 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 Gene3D G3DSA:2.40.33.10 71 169 3.8E-161 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 471 3.4E-159 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 SUPERFAMILY SSF51621 2 338 4.54E-92 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 SUPERFAMILY SSF52935 324 473 1.44E-36 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 Pfam PF00224 Pyruvate kinase, barrel domain 3 338 7.7E-114 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 471 2.4E-28 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 C4901_14465 84d7ce525b9f34c57ac6a195a9f96276 480 Gene3D G3DSA:3.20.20.60 3 335 3.8E-161 T 14-10-2018 C4901_02330 5eec6b18c7b408c32125bcf4954d58ea 447 Pfam PF07724 AAA domain (Cdc48 subfamily) 192 333 5.6E-39 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_02330 5eec6b18c7b408c32125bcf4954d58ea 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 137 4.6E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_02330 5eec6b18c7b408c32125bcf4954d58ea 447 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 447 9.6E-206 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 C4901_02330 5eec6b18c7b408c32125bcf4954d58ea 447 SMART SM01086 339 435 1.3E-19 T 14-10-2018 IPR019489 Clp ATPase, C-terminal C4901_02330 5eec6b18c7b408c32125bcf4954d58ea 447 Gene3D G3DSA:1.10.8.60 339 444 2.6E-35 T 14-10-2018 C4901_02330 5eec6b18c7b408c32125bcf4954d58ea 447 SMART SM00382 50 336 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_02330 5eec6b18c7b408c32125bcf4954d58ea 447 SUPERFAMILY SSF52540 3 440 7.79E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02330 5eec6b18c7b408c32125bcf4954d58ea 447 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 447 41.847 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 C4901_01760 c349bd846558e1be2f2e81b69607c6f6 411 Pfam PF00482 Type II secretion system (T2SS), protein F 273 395 8.4E-26 T 14-10-2018 IPR018076 Type II secretion system F domain C4901_01760 c349bd846558e1be2f2e81b69607c6f6 411 Pfam PF00482 Type II secretion system (T2SS), protein F 70 193 1.0E-27 T 14-10-2018 IPR018076 Type II secretion system F domain C4901_01760 c349bd846558e1be2f2e81b69607c6f6 411 Gene3D G3DSA:1.20.81.30 256 367 1.2E-27 T 14-10-2018 C4901_01760 c349bd846558e1be2f2e81b69607c6f6 411 Gene3D G3DSA:1.20.81.30 59 173 2.1E-29 T 14-10-2018 C4901_01760 c349bd846558e1be2f2e81b69607c6f6 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 368 382 4.1E-12 T 14-10-2018 IPR003004 GspF/PilC family C4901_01760 c349bd846558e1be2f2e81b69607c6f6 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 384 403 4.1E-12 T 14-10-2018 IPR003004 GspF/PilC family C4901_01760 c349bd846558e1be2f2e81b69607c6f6 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 165 193 4.1E-12 T 14-10-2018 IPR003004 GspF/PilC family C4901_01760 c349bd846558e1be2f2e81b69607c6f6 411 PRINTS PR00812 Bacterial general secretion pathway protein F signature 66 78 4.1E-12 T 14-10-2018 IPR003004 GspF/PilC family C4901_10685 72d5ce7ae7235837e1e0429906d5c019 321 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 68 297 2.7E-26 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related C4901_03560 ee09ef627131e544138c36acd4b9530f 451 Pfam PF00782 Dual specificity phosphatase, catalytic domain 321 403 1.3E-6 T 14-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 C4901_03560 ee09ef627131e544138c36acd4b9530f 451 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 381 391 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 C4901_03560 ee09ef627131e544138c36acd4b9530f 451 Pfam PF00005 ABC transporter 31 176 4.3E-8 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_03560 ee09ef627131e544138c36acd4b9530f 451 SUPERFAMILY SSF52799 297 434 5.85E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like C4901_03560 ee09ef627131e544138c36acd4b9530f 451 SUPERFAMILY SSF52540 14 238 5.63E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03560 ee09ef627131e544138c36acd4b9530f 451 Gene3D G3DSA:3.40.50.300 16 282 9.9E-37 T 14-10-2018 C4901_03560 ee09ef627131e544138c36acd4b9530f 451 Gene3D G3DSA:3.90.190.10 296 443 1.0E-28 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like C4901_03560 ee09ef627131e544138c36acd4b9530f 451 SMART SM00382 39 225 1.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03560 ee09ef627131e544138c36acd4b9530f 451 SMART SM00404 343 435 0.0013 T 14-10-2018 IPR003595 Protein-tyrosine phosphatase, catalytic C4901_00555 ec02e9f0f0577f0fa0270b9777a3103f 106 Pfam PF03091 CutA1 divalent ion tolerance protein 7 102 1.9E-34 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 C4901_00555 ec02e9f0f0577f0fa0270b9777a3103f 106 SUPERFAMILY SSF54913 4 105 1.93E-35 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C4901_00555 ec02e9f0f0577f0fa0270b9777a3103f 106 Gene3D G3DSA:3.30.70.120 2 106 1.7E-37 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C4901_10725 7d46e49cbdf5d3c95fbea0d410e2e1e4 100 SUPERFAMILY SSF46626 14 100 7.57E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_10725 7d46e49cbdf5d3c95fbea0d410e2e1e4 100 Pfam PF00034 Cytochrome c 17 99 5.5E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10725 7d46e49cbdf5d3c95fbea0d410e2e1e4 100 Gene3D G3DSA:1.10.760.10 17 100 1.6E-24 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_10715 3aac5025a7dede347268239eb6ed390d 253 Gene3D G3DSA:1.10.287.90 40 114 3.5E-6 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10715 3aac5025a7dede347268239eb6ed390d 253 Gene3D G3DSA:2.60.40.2600 131 252 1.3E-39 T 14-10-2018 C4901_10715 3aac5025a7dede347268239eb6ed390d 253 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 178 232 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10715 3aac5025a7dede347268239eb6ed390d 253 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 159 237 5.9E-11 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10715 3aac5025a7dede347268239eb6ed390d 253 SUPERFAMILY SSF49503 132 250 2.53E-34 T 14-10-2018 IPR008972 Cupredoxin C4901_12180 1507d27dcf1edbcba8cb3e6ff49abd5c 451 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 255 319 1.5E-6 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_12180 1507d27dcf1edbcba8cb3e6ff49abd5c 451 Pfam PF07282 Putative transposase DNA-binding domain 310 369 3.5E-17 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_12180 1507d27dcf1edbcba8cb3e6ff49abd5c 451 Pfam PF01385 Probable transposase 176 286 2.5E-12 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C4901_15680 0894aa9169120aea625863ea8965a311 241 Gene3D G3DSA:1.10.10.10 1 91 1.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_15680 0894aa9169120aea625863ea8965a311 241 SUPERFAMILY SSF46785 4 85 1.34E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_15680 0894aa9169120aea625863ea8965a311 241 Pfam PF12840 Helix-turn-helix domain 8 68 1.4E-12 T 14-10-2018 C4901_15680 0894aa9169120aea625863ea8965a311 241 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 9.5E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_15680 0894aa9169120aea625863ea8965a311 241 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 9.5E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_15680 0894aa9169120aea625863ea8965a311 241 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 9.5E-5 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_15680 0894aa9169120aea625863ea8965a311 241 SMART SM00418 9 88 5.7E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_03985 3d6066d1d0d0359e4188e71501bde144 319 Pfam PF13531 Bacterial extracellular solute-binding protein 44 308 1.9E-36 T 14-10-2018 C4901_03985 3d6066d1d0d0359e4188e71501bde144 319 Gene3D G3DSA:3.40.190.10 44 303 1.5E-40 T 14-10-2018 C4901_03985 3d6066d1d0d0359e4188e71501bde144 319 SUPERFAMILY SSF53850 42 308 1.58E-23 T 14-10-2018 C4901_03985 3d6066d1d0d0359e4188e71501bde144 319 Gene3D G3DSA:3.40.190.10 124 274 1.5E-40 T 14-10-2018 C4901_10595 23c0af6868c1c3a7d1906840e72464cb 243 Gene3D G3DSA:1.20.1260.10 51 207 1.5E-44 T 14-10-2018 IPR012347 Ferritin-like C4901_10595 23c0af6868c1c3a7d1906840e72464cb 243 Pfam PF00210 Ferritin-like domain 82 208 1.2E-12 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 C4901_10595 23c0af6868c1c3a7d1906840e72464cb 243 SUPERFAMILY SSF47240 63 205 5.91E-18 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_11735 c029e23e0d67a4bf47ee83d1ce954777 166 Gene3D G3DSA:3.30.70.560 5 162 6.7E-51 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C4901_11735 c029e23e0d67a4bf47ee83d1ce954777 166 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 7 137 2.6E-40 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C4901_11735 c029e23e0d67a4bf47ee83d1ce954777 166 SUPERFAMILY SSF55083 7 146 2.09E-47 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C4901_11735 c029e23e0d67a4bf47ee83d1ce954777 166 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 9 137 6.4E-34 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 C4901_04750 695e53397d506a6c93c1bb3a9002e76d 355 Gene3D G3DSA:1.20.120.1840 2 188 4.9E-53 T 14-10-2018 C4901_04750 695e53397d506a6c93c1bb3a9002e76d 355 Gene3D G3DSA:3.40.50.10470 189 344 6.3E-51 T 14-10-2018 C4901_04750 695e53397d506a6c93c1bb3a9002e76d 355 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 38 338 1.8E-104 T 14-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 C4901_04750 695e53397d506a6c93c1bb3a9002e76d 355 SUPERFAMILY SSF100950 7 341 4.12E-109 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C4901_04750 695e53397d506a6c93c1bb3a9002e76d 355 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 10 349 39.796 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 C4901_04750 695e53397d506a6c93c1bb3a9002e76d 355 Pfam PF01008 Initiation factor 2 subunit family 53 338 2.4E-71 T 14-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 C4901_04750 695e53397d506a6c93c1bb3a9002e76d 355 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 12 338 3.6E-133 T 14-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 C4901_12255 f04ab31c9f3a0d6f03d33c767e19ff49 597 Gene3D G3DSA:1.10.645.10 2 582 1.6E-253 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_12255 f04ab31c9f3a0d6f03d33c767e19ff49 597 SUPERFAMILY SSF56762 12 582 8.37E-171 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_12255 f04ab31c9f3a0d6f03d33c767e19ff49 597 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 54 79 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 C4901_12255 f04ab31c9f3a0d6f03d33c767e19ff49 597 Pfam PF00374 Nickel-dependent hydrogenase 54 582 1.9E-219 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C4901_12255 f04ab31c9f3a0d6f03d33c767e19ff49 597 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 573 582 - T 14-10-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 C4901_01570 f0936b6e36ab4ac4918ad5ce5b0de5aa 128 SUPERFAMILY SSF54593 1 125 2.15E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_01570 f0936b6e36ab4ac4918ad5ce5b0de5aa 128 Gene3D G3DSA:3.10.180.10 8 121 2.8E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_01570 f0936b6e36ab4ac4918ad5ce5b0de5aa 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 119 4.8E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 Pfam PF00557 Metallopeptidase family M24 13 241 1.9E-55 T 14-10-2018 IPR000994 Peptidase M24 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 161 173 5.2E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 192 204 5.2E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 91 107 5.2E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 5.2E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 167 185 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 249 1.4E-96 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 Hamap MF_01974 Methionine aminopeptidase [map]. 3 250 42.255 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 Gene3D G3DSA:3.90.230.10 1 255 1.9E-112 T 14-10-2018 C4901_10440 1a2bd39b6b61ddde384dbeeac14915db 255 SUPERFAMILY SSF55920 3 253 3.53E-93 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like C4901_02680 145026d56243d89e4be91ff0be492493 68 PIRSF PIRSF002599 1 68 7.7E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 C4901_02680 145026d56243d89e4be91ff0be492493 68 SMART SM00357 3 67 5.4E-26 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 C4901_02680 145026d56243d89e4be91ff0be492493 68 Gene3D G3DSA:2.40.50.140 2 65 5.8E-29 T 14-10-2018 C4901_02680 145026d56243d89e4be91ff0be492493 68 PRINTS PR00050 Cold shock protein signature 4 19 4.1E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_02680 145026d56243d89e4be91ff0be492493 68 PRINTS PR00050 Cold shock protein signature 40 58 4.1E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_02680 145026d56243d89e4be91ff0be492493 68 PRINTS PR00050 Cold shock protein signature 25 34 4.1E-16 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_02680 145026d56243d89e4be91ff0be492493 68 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 14-10-2018 IPR019844 Cold-shock conserved site C4901_02680 145026d56243d89e4be91ff0be492493 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 4.2E-30 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 C4901_02680 145026d56243d89e4be91ff0be492493 68 SUPERFAMILY SSF50249 1 66 4.93E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold C4901_05320 5650e9d05e84081ea4e9343c274d6252 365 Pfam PF01548 Transposase 8 154 1.2E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C4901_05320 5650e9d05e84081ea4e9343c274d6252 365 Pfam PF02371 Transposase IS116/IS110/IS902 family 224 297 5.0E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C4901_13145 5650e9d05e84081ea4e9343c274d6252 365 Pfam PF01548 Transposase 8 154 1.2E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C4901_13145 5650e9d05e84081ea4e9343c274d6252 365 Pfam PF02371 Transposase IS116/IS110/IS902 family 224 297 5.0E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C4901_02055 0023688f68bf245d9e398a6d117d2296 438 Pfam PF07592 Rhodopirellula transposase DDE domain 194 355 8.8E-75 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_02055 0023688f68bf245d9e398a6d117d2296 438 Pfam PF07592 Rhodopirellula transposase DDE domain 92 193 1.3E-38 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 Gene3D G3DSA:2.60.260.20 1 70 5.0E-20 T 14-10-2018 C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 Pfam PF05194 UreE urease accessory protein, C-terminal domain 76 143 1.5E-23 T 14-10-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0016151|GO:0019627|GO:0065003 C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 SUPERFAMILY SSF69287 1 69 3.14E-17 T 14-10-2018 IPR036118 UreE urease accessory, N-terminal domain superfamily C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 PIRSF PIRSF036402 1 144 2.4E-40 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 SUPERFAMILY SSF69737 74 137 1.06E-17 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 Pfam PF02814 UreE urease accessory protein, N-terminal domain 11 64 1.0E-16 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 Hamap MF_00822 Urease accessory protein UreE [ureE]. 3 138 21.982 T 14-10-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 Gene3D G3DSA:3.30.70.790 71 142 1.0E-27 T 14-10-2018 IPR036675 UreE, C-terminal domain superfamily GO:0016151|GO:0019627|GO:0065003 C4901_16195 2a0fac377c8dac62d68124eb42400ac2 144 SMART SM00988 1 64 4.0E-15 T 14-10-2018 IPR004029 UreE urease accessory, N-terminal C4901_08665 e649ebbcb9162e4cb8966e35250834e2 359 Gene3D G3DSA:3.30.479.30 125 229 3.4E-15 T 14-10-2018 C4901_08665 e649ebbcb9162e4cb8966e35250834e2 359 TIGRFAM TIGR01933 hflK: HflK protein 63 331 5.5E-61 T 14-10-2018 IPR010201 HflK GO:0016021 C4901_08665 e649ebbcb9162e4cb8966e35250834e2 359 Pfam PF12221 Bacterial membrane protein N terminal 3 37 1.7E-7 T 14-10-2018 IPR020980 Menbrane protein HflK, N-terminal C4901_08665 e649ebbcb9162e4cb8966e35250834e2 359 SUPERFAMILY SSF117892 132 243 1.27E-15 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily C4901_08665 e649ebbcb9162e4cb8966e35250834e2 359 SMART SM00244 61 238 1.2E-11 T 14-10-2018 IPR001107 Band 7 domain C4901_08665 e649ebbcb9162e4cb8966e35250834e2 359 Pfam PF01145 SPFH domain / Band 7 family 65 253 6.7E-25 T 14-10-2018 IPR001107 Band 7 domain C4901_08745 04c751b3ba3b430502d5a340f1640d74 361 Pfam PF12849 PBP superfamily domain 39 327 1.7E-45 T 14-10-2018 IPR024370 PBP domain C4901_08745 04c751b3ba3b430502d5a340f1640d74 361 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 39 360 7.0E-101 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 C4901_08745 04c751b3ba3b430502d5a340f1640d74 361 SUPERFAMILY SSF53850 39 360 1.71E-70 T 14-10-2018 C4901_08745 04c751b3ba3b430502d5a340f1640d74 361 PIRSF PIRSF002756 8 361 7.1E-78 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 C4901_08745 04c751b3ba3b430502d5a340f1640d74 361 Gene3D G3DSA:3.40.190.10 43 348 8.3E-95 T 14-10-2018 C4901_08745 04c751b3ba3b430502d5a340f1640d74 361 Gene3D G3DSA:3.40.190.10 115 298 8.3E-95 T 14-10-2018 C4901_14035 a343066c41cfc2e98f50ff972d4cec26 62 PIRSF PIRSF002211 1 62 5.9E-24 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14035 a343066c41cfc2e98f50ff972d4cec26 62 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 60 2.8E-18 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14035 a343066c41cfc2e98f50ff972d4cec26 62 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 60 18.351 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14035 a343066c41cfc2e98f50ff972d4cec26 62 Pfam PF00327 Ribosomal protein L30p/L7e 7 56 2.3E-15 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain C4901_14035 a343066c41cfc2e98f50ff972d4cec26 62 SUPERFAMILY SSF55129 4 61 1.57E-17 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily C4901_14035 a343066c41cfc2e98f50ff972d4cec26 62 Gene3D G3DSA:3.30.1390.20 1 60 1.3E-21 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily C4901_05335 de06e7d21dd9b3cac0c455f4208446b4 387 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 24 357 3.3E-87 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 C4901_05335 de06e7d21dd9b3cac0c455f4208446b4 387 Gene3D G3DSA:3.20.20.70 23 383 1.1E-141 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_05335 de06e7d21dd9b3cac0c455f4208446b4 387 SUPERFAMILY SSF51395 22 380 3.21E-127 T 14-10-2018 C4901_06475 3f288e29a506bb2d751121f19d60af4a 259 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 79 234 4.3E-24 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system C4901_12225 16cbbc041d19d9785dd028471c164dff 356 Pfam PF00374 Nickel-dependent hydrogenase 275 352 9.1E-9 T 14-10-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 C4901_12225 16cbbc041d19d9785dd028471c164dff 356 Gene3D G3DSA:1.10.645.10 201 353 6.5E-18 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_12225 16cbbc041d19d9785dd028471c164dff 356 Gene3D G3DSA:1.10.645.10 3 138 1.2E-11 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_12225 16cbbc041d19d9785dd028471c164dff 356 SUPERFAMILY SSF56762 7 351 3.66E-35 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_00470 e930cb04d0417c1aff133f90bf597fc9 291 Pfam PF11459 Transcriptional regulator, AbiEi antitoxin, Type IV TA system 112 284 3.9E-43 T 14-10-2018 IPR021561 Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system C4901_00470 e930cb04d0417c1aff133f90bf597fc9 291 Pfam PF17194 Transcriptional regulator, AbiEi antitoxin N-terminal domain 5 104 3.7E-28 T 14-10-2018 IPR033455 Transcriptional regulator AbiEi antitoxin, N-terminal domain C4901_03885 5c536ded5e0eefe96d99384049513e08 369 SMART SM00897 37 200 0.0037 T 14-10-2018 IPR013702 FIST domain, N-terminal C4901_03885 5c536ded5e0eefe96d99384049513e08 369 SMART SM01204 201 345 3.1E-19 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 C4901_03885 5c536ded5e0eefe96d99384049513e08 369 Pfam PF08495 FIST N domain 40 198 7.3E-5 T 14-10-2018 IPR013702 FIST domain, N-terminal C4901_03885 5c536ded5e0eefe96d99384049513e08 369 Pfam PF10442 FIST C domain 208 344 1.2E-18 T 14-10-2018 IPR019494 FIST, C-domain Reactome: R-HSA-8951664|Reactome: R-HSA-983168 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 Gene3D G3DSA:2.20.28.140 3 37 1.2E-13 T 14-10-2018 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 PRINTS PR00421 Thioredoxin family signature 67 76 2.6E-9 T 14-10-2018 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 PRINTS PR00421 Thioredoxin family signature 59 67 2.6E-9 T 14-10-2018 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 PRINTS PR00421 Thioredoxin family signature 107 118 2.6E-9 T 14-10-2018 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 SUPERFAMILY SSF52833 27 143 8.27E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 141 3.0E-33 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 Pfam PF00085 Thioredoxin 42 140 4.7E-28 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 PIRSF PIRSF000077 38 143 7.1E-33 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 Gene3D G3DSA:3.40.30.10 41 143 1.3E-30 T 14-10-2018 C4901_01720 02ca4615ba66d35af2ac6c6d1cdfa234 143 ProSitePatterns PS00194 Thioredoxin family active site. 60 78 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C4901_00380 aa80ac358bff3bf8f9aba1b29efabc17 219 Pfam PF13808 DDE_Tnp_1-associated 28 78 1.8E-11 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_11100 1013cd5a7d9f067326b1500479ab80c7 526 Pfam PF03050 Transposase IS66 family 179 466 2.6E-100 T 14-10-2018 IPR004291 Transposase, IS66 C4901_11100 1013cd5a7d9f067326b1500479ab80c7 526 Pfam PF13007 Transposase C of IS166 homeodomain 38 112 3.8E-10 T 14-10-2018 IPR024463 Transposase TnpC, homeodomain C4901_11100 1013cd5a7d9f067326b1500479ab80c7 526 Pfam PF13817 IS66 C-terminal element 474 510 1.8E-11 T 14-10-2018 IPR039552 Transposase IS66, C-terminal C4901_11100 1013cd5a7d9f067326b1500479ab80c7 526 Pfam PF13005 zinc-finger binding domain of transposase IS66 126 157 5.6E-9 T 14-10-2018 IPR024474 Zinc-finger binding domain of transposase IS66 C4901_06350 8922446787317ba6fb7ccec04ab65fda 200 Pfam PF00881 Nitroreductase family 8 176 4.1E-31 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 C4901_06350 8922446787317ba6fb7ccec04ab65fda 200 SUPERFAMILY SSF55469 1 200 4.32E-52 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C4901_06350 8922446787317ba6fb7ccec04ab65fda 200 Gene3D G3DSA:3.40.109.10 1 196 1.6E-49 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 C4901_13805 289db112f6b4510a5f904e67624f1e18 143 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 15 129 2.4E-26 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 C4901_13805 289db112f6b4510a5f904e67624f1e18 143 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 11 135 2.6E-45 T 14-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 C4901_13805 289db112f6b4510a5f904e67624f1e18 143 Gene3D G3DSA:3.10.129.10 3 141 4.0E-40 T 14-10-2018 C4901_13805 289db112f6b4510a5f904e67624f1e18 143 Pfam PF03061 Thioesterase superfamily 26 108 3.1E-12 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 C4901_13805 289db112f6b4510a5f904e67624f1e18 143 SUPERFAMILY SSF54637 9 139 1.94E-37 T 14-10-2018 IPR029069 HotDog domain superfamily C4901_13805 289db112f6b4510a5f904e67624f1e18 143 PIRSF PIRSF003230 2 143 1.5E-42 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 C4901_14535 3aa54a74c7c5fcd4b248be091b3cf2ac 132 Gene3D G3DSA:3.40.50.12740 13 132 2.2E-36 T 14-10-2018 C4901_14535 3aa54a74c7c5fcd4b248be091b3cf2ac 132 SMART SM00448 14 127 1.1E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_14535 3aa54a74c7c5fcd4b248be091b3cf2ac 132 Pfam PF00072 Response regulator receiver domain 16 127 1.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_14535 3aa54a74c7c5fcd4b248be091b3cf2ac 132 SUPERFAMILY SSF52172 13 131 2.28E-34 T 14-10-2018 IPR011006 CheY-like superfamily C4901_09415 645a558a10db39f5724c3b9fe0a61e6f 228 Gene3D G3DSA:3.40.470.10 21 227 2.5E-63 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_09415 645a558a10db39f5724c3b9fe0a61e6f 228 SUPERFAMILY SSF52141 28 224 1.9E-46 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_09415 645a558a10db39f5724c3b9fe0a61e6f 228 SMART SM00987 54 220 9.0E-32 T 14-10-2018 C4901_09415 645a558a10db39f5724c3b9fe0a61e6f 228 SMART SM00986 54 220 9.0E-32 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_09415 645a558a10db39f5724c3b9fe0a61e6f 228 Pfam PF03167 Uracil DNA glycosylase superfamily 55 220 3.6E-32 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_09395 ba2c80d38f3842ad39b7e4233246e7e6 297 Pfam PF13649 Methyltransferase domain 120 216 7.5E-12 T 14-10-2018 C4901_09395 ba2c80d38f3842ad39b7e4233246e7e6 297 SUPERFAMILY SSF53335 99 286 1.55E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_09395 ba2c80d38f3842ad39b7e4233246e7e6 297 Gene3D G3DSA:3.40.50.150 75 289 2.0E-22 T 14-10-2018 C4901_01010 9a8cc7d15dc9d265e578105b17fb6b70 256 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 10 256 1.3E-115 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 C4901_01010 9a8cc7d15dc9d265e578105b17fb6b70 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_01010 9a8cc7d15dc9d265e578105b17fb6b70 256 SUPERFAMILY SSF52540 10 242 5.04E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_01010 9a8cc7d15dc9d265e578105b17fb6b70 256 SMART SM00382 34 236 1.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01010 9a8cc7d15dc9d265e578105b17fb6b70 256 Gene3D G3DSA:3.40.50.300 8 254 9.4E-70 T 14-10-2018 C4901_01010 9a8cc7d15dc9d265e578105b17fb6b70 256 Pfam PF00005 ABC transporter 25 180 8.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_00860 d5e4245f05227822225de93cac5d9294 137 SMART SM00450 37 134 4.8E-28 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_00860 d5e4245f05227822225de93cac5d9294 137 Pfam PF00581 Rhodanese-like domain 40 129 4.7E-20 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_00860 d5e4245f05227822225de93cac5d9294 137 Gene3D G3DSA:3.40.250.10 29 136 6.8E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_00860 d5e4245f05227822225de93cac5d9294 137 SUPERFAMILY SSF52821 32 136 3.54E-37 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SUPERFAMILY SSF50998 152 374 1.14E-34 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 Gene3D G3DSA:2.40.10.480 350 416 3.8E-5 T 14-10-2018 C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 Pfam PF13360 PQQ-like domain 355 464 5.8E-10 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 Pfam PF13360 PQQ-like domain 212 321 7.7E-14 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SUPERFAMILY SSF50998 354 494 3.49E-18 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 Gene3D G3DSA:2.130.10.10 201 349 1.3E-24 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 Pfam PF01011 PQQ enzyme repeat 138 168 9.4E-6 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SMART SM00564 281 313 24.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SMART SM00564 240 271 6.8E-5 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SMART SM00564 430 461 45.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SMART SM00564 385 417 290.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SMART SM00564 174 231 49.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SMART SM00564 327 370 30.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 SMART SM00564 132 164 1.8 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 Gene3D G3DSA:2.40.128.630 119 200 3.5E-8 T 14-10-2018 C4901_06155 5abc5c9952a5b9ed2f224b64929fdde3 503 Gene3D G3DSA:2.40.128.630 421 494 8.8E-6 T 14-10-2018 C4901_01550 16da155606e27133fe05374b14367ac5 200 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 70 81 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_01550 16da155606e27133fe05374b14367ac5 200 Gene3D G3DSA:1.10.1060.10 2 101 7.5E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_01550 16da155606e27133fe05374b14367ac5 200 SUPERFAMILY SSF46548 21 99 1.71E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_01550 16da155606e27133fe05374b14367ac5 200 Pfam PF13183 4Fe-4S dicluster domain 24 83 1.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_13270 a82b5e0b8b235b5cf94eec6ff7b27d88 235 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 66 156 6.6E-9 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal C4901_13270 a82b5e0b8b235b5cf94eec6ff7b27d88 235 Gene3D G3DSA:3.40.225.10 40 233 4.7E-17 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily C4901_13270 a82b5e0b8b235b5cf94eec6ff7b27d88 235 SUPERFAMILY SSF53639 43 216 7.06E-14 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily C4901_13270 a82b5e0b8b235b5cf94eec6ff7b27d88 235 SMART SM01007 39 225 0.0036 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal C4901_10525 c3203857ff4b14b2943666d0d8567acc 150 Gene3D G3DSA:3.40.50.300 1 147 4.4E-38 T 14-10-2018 C4901_10525 c3203857ff4b14b2943666d0d8567acc 150 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 8 127 1.5E-32 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 C4901_10525 c3203857ff4b14b2943666d0d8567acc 150 SUPERFAMILY SSF52540 23 117 1.0E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10525 c3203857ff4b14b2943666d0d8567acc 150 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 6 136 2.4E-33 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 C4901_14715 fdc9a8d66670a717df62e2cc2db70b2d 158 Gene3D G3DSA:1.10.3100.20 2 156 1.7E-63 T 14-10-2018 C4901_14715 fdc9a8d66670a717df62e2cc2db70b2d 158 Pfam PF03270 Protein of unknown function, DUF269 35 155 3.7E-51 T 14-10-2018 IPR004952 Uncharacterised protein family UPF0460 C4901_14715 fdc9a8d66670a717df62e2cc2db70b2d 158 PIRSF PIRSF005788 1 156 2.6E-66 T 14-10-2018 IPR004952 Uncharacterised protein family UPF0460 C4901_14715 fdc9a8d66670a717df62e2cc2db70b2d 158 TIGRFAM TIGR02935 TIGR02935: probable nitrogen fixation protein 15 154 2.0E-65 T 14-10-2018 IPR004952 Uncharacterised protein family UPF0460 C4901_04095 07fee7833cbdd825fdc187096dee24f6 384 Pfam PF01594 AI-2E family transporter 50 371 3.8E-51 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like C4901_08145 9a4a29996f17308def7705434933e813 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 259 344 1.2E-8 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_08145 9a4a29996f17308def7705434933e813 402 Pfam PF12323 Helix-turn-helix domain 1 45 7.2E-15 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain C4901_08145 9a4a29996f17308def7705434933e813 402 Pfam PF07282 Putative transposase DNA-binding domain 317 386 4.1E-21 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_08145 9a4a29996f17308def7705434933e813 402 Pfam PF01385 Probable transposase 178 288 9.7E-20 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C4901_03710 bb06e5aa9682c52639d6ab64f2d4adcd 296 Gene3D G3DSA:3.10.310.30 221 286 1.6E-8 T 14-10-2018 C4901_03710 bb06e5aa9682c52639d6ab64f2d4adcd 296 SUPERFAMILY SSF64182 6 284 4.53E-19 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 131 146 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 6 314 1.4E-116 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 314 2.6E-29 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 SUPERFAMILY SSF53271 71 306 1.78E-58 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 6 123 3.4E-48 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 Gene3D G3DSA:3.40.50.2020 9 303 1.3E-124 T 14-10-2018 C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 6 315 48.106 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 SMART SM01400 6 123 6.6E-75 T 14-10-2018 C4901_02420 fadbd495284388c5bb0cb5d432d37176 316 Gene3D G3DSA:3.40.50.2020 150 291 1.3E-124 T 14-10-2018 C4901_00410 bc103207607615ee6a2131c76579a623 216 Gene3D G3DSA:3.40.50.150 2 215 1.4E-68 T 14-10-2018 C4901_00410 bc103207607615ee6a2131c76579a623 216 Pfam PF01596 O-methyltransferase 21 211 9.5E-54 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 C4901_00410 bc103207607615ee6a2131c76579a623 216 SUPERFAMILY SSF53335 6 212 1.17E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_01680 c1f85fed542f08a4713dfa9ba2f65aa2 222 SUPERFAMILY SSF52833 1 90 2.47E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_01680 c1f85fed542f08a4713dfa9ba2f65aa2 222 Gene3D G3DSA:1.20.1050.10 78 191 9.7E-16 T 14-10-2018 C4901_01680 c1f85fed542f08a4713dfa9ba2f65aa2 222 Gene3D G3DSA:3.40.30.10 9 77 9.7E-16 T 14-10-2018 C4901_01680 c1f85fed542f08a4713dfa9ba2f65aa2 222 Pfam PF13417 Glutathione S-transferase, N-terminal domain 4 76 1.5E-7 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 PIRSF PIRSF002560 1 143 5.1E-27 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 Pfam PF00210 Ferritin-like domain 11 138 3.0E-21 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 Gene3D G3DSA:1.20.1260.10 1 143 2.4E-36 T 14-10-2018 IPR012347 Ferritin-like C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 SUPERFAMILY SSF47240 1 138 2.18E-32 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 PRINTS PR00601 Bacterioferritin signature 3 22 1.0E-11 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 PRINTS PR00601 Bacterioferritin signature 107 127 1.0E-11 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 PRINTS PR00601 Bacterioferritin signature 23 43 1.0E-11 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 PRINTS PR00601 Bacterioferritin signature 86 106 1.0E-11 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C4901_10075 6c8d266ba43f57c080c0f0338811fa23 145 PRINTS PR00601 Bacterioferritin signature 44 64 1.0E-11 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 C4901_01410 9b137ac0c1077e57754c97dd791e5d76 94 Pfam PF04359 Protein of unknown function (DUF493) 13 94 9.5E-23 T 14-10-2018 IPR007454 Uncharacterised protein family UPF0250 C4901_01410 9b137ac0c1077e57754c97dd791e5d76 94 Gene3D G3DSA:3.30.70.260 7 94 8.0E-25 T 14-10-2018 C4901_01410 9b137ac0c1077e57754c97dd791e5d76 94 SUPERFAMILY SSF117991 8 94 3.53E-20 T 14-10-2018 IPR027471 YbeD-like domain superfamily C4901_11505 2db57006495ada3f1ff35060e02b2d63 693 Gene3D G3DSA:3.40.50.300 108 268 5.5E-21 T 14-10-2018 C4901_11505 2db57006495ada3f1ff35060e02b2d63 693 Gene3D G3DSA:3.40.50.300 319 537 9.2E-38 T 14-10-2018 C4901_11505 2db57006495ada3f1ff35060e02b2d63 693 SUPERFAMILY SSF52540 149 517 5.9E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11505 2db57006495ada3f1ff35060e02b2d63 693 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 145 514 1.2E-71 T 14-10-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain C4901_13685 43795045c63be8ccdc9e050cb33d22f5 392 Pfam PF03050 Transposase IS66 family 38 331 1.4E-41 T 14-10-2018 IPR004291 Transposase, IS66 C4901_07570 a29adec828ef6ae388b6c9d72420c112 175 Pfam PF01610 Transposase 44 147 4.1E-29 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 SUPERFAMILY SSF52402 28 227 1.47E-50 T 14-10-2018 C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 Gene3D G3DSA:3.40.50.620 26 228 5.6E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 SUPERFAMILY SSF52467 235 353 1.53E-45 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 SMART SM00893 30 222 5.7E-43 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 236 317 5.5E-36 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 Gene3D G3DSA:3.40.50.1220 230 364 5.2E-53 T 14-10-2018 C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 298 324 - T 14-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 Pfam PF01012 Electron transfer flavoprotein domain 30 212 5.9E-40 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C4901_14830 9076741d9111ad620cacc637c0ef9ce2 365 PIRSF PIRSF000089 26 359 1.8E-105 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 C4901_06640 dcf462a38490d5f530346dd64238ec88 146 Gene3D G3DSA:3.40.50.1010 4 81 2.1E-14 T 14-10-2018 C4901_06640 dcf462a38490d5f530346dd64238ec88 146 Pfam PF01850 PIN domain 12 78 2.2E-7 T 14-10-2018 IPR002716 PIN domain C4901_06640 dcf462a38490d5f530346dd64238ec88 146 SUPERFAMILY SSF88723 5 80 2.8E-11 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_04160 ed8e6b625a25a29c66f555293b1d0cfd 417 Gene3D G3DSA:1.20.1250.20 19 218 5.9E-20 T 14-10-2018 C4901_04160 ed8e6b625a25a29c66f555293b1d0cfd 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 74 90 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C4901_04160 ed8e6b625a25a29c66f555293b1d0cfd 417 SUPERFAMILY SSF103473 23 414 5.1E-54 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_04160 ed8e6b625a25a29c66f555293b1d0cfd 417 Pfam PF07690 Major Facilitator Superfamily 25 197 2.5E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_04160 ed8e6b625a25a29c66f555293b1d0cfd 417 Pfam PF07690 Major Facilitator Superfamily 246 411 3.9E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_04160 ed8e6b625a25a29c66f555293b1d0cfd 417 Gene3D G3DSA:1.20.1250.20 235 416 1.7E-24 T 14-10-2018 C4901_01525 aa28f90adeb26d040ed2c1f82e919ffa 695 Gene3D G3DSA:3.40.50.410 507 691 9.0E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_01525 aa28f90adeb26d040ed2c1f82e919ffa 695 SUPERFAMILY SSF53300 511 691 5.48E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_01525 aa28f90adeb26d040ed2c1f82e919ffa 695 SMART SM00327 510 694 1.1E-10 T 14-10-2018 IPR002035 von Willebrand factor, type A C4901_01305 e71b90bad5144ca0a0179e2c1ed85579 511 Pfam PF01976 Protein of unknown function DUF116 354 446 3.5E-6 T 14-10-2018 IPR002829 Protein of unknown function DUF116 C4901_01305 e71b90bad5144ca0a0179e2c1ed85579 511 SUPERFAMILY SSF55681 9 206 1.78E-22 T 14-10-2018 C4901_01305 e71b90bad5144ca0a0179e2c1ed85579 511 Gene3D G3DSA:3.30.930.10 8 233 1.6E-20 T 14-10-2018 C4901_07975 4259dd729f5fda6325cb468c5c4040f3 99 Gene3D G3DSA:3.30.70.1060 1 98 4.2E-26 T 14-10-2018 C4901_07975 4259dd729f5fda6325cb468c5c4040f3 99 SUPERFAMILY SSF54909 1 97 5.01E-24 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C4901_07975 4259dd729f5fda6325cb468c5c4040f3 99 Pfam PF03795 YCII-related domain 1 95 2.1E-21 T 14-10-2018 IPR005545 YCII-related C4901_10490 df810e37fd018b0002779d42d5789c61 466 Pfam PF13384 Homeodomain-like domain 14 45 2.9E-6 T 14-10-2018 C4901_10490 df810e37fd018b0002779d42d5789c61 466 SUPERFAMILY SSF53098 115 279 7.33E-9 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_10490 df810e37fd018b0002779d42d5789c61 466 Pfam PF00665 Integrase core domain 116 234 1.5E-9 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_10490 df810e37fd018b0002779d42d5789c61 466 SUPERFAMILY SSF46689 6 91 2.11E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_10490 df810e37fd018b0002779d42d5789c61 466 Gene3D G3DSA:1.10.10.60 3 40 2.9E-6 T 14-10-2018 C4901_06105 c6326e38793643c99bc793c9c4a11307 306 Pfam PF11231 Protein of unknown function (DUF3034) 26 302 7.3E-54 T 14-10-2018 IPR021393 Protein of unknown function DUF3034 C4901_10105 e15e03ec3d0e1e2acbbb08436e4d3e00 522 Pfam PF08936 Carboxysome Shell Carbonic Anhydrase 61 519 5.7E-197 T 14-10-2018 IPR014074 Carboxysome shell carbonic anhydrase C4901_10105 e15e03ec3d0e1e2acbbb08436e4d3e00 522 Gene3D G3DSA:1.20.120.1310 48 154 4.7E-36 T 14-10-2018 C4901_10105 e15e03ec3d0e1e2acbbb08436e4d3e00 522 Gene3D G3DSA:3.30.1330.140 406 522 3.1E-43 T 14-10-2018 C4901_10105 e15e03ec3d0e1e2acbbb08436e4d3e00 522 TIGRFAM TIGR02701 shell_carb_anhy: carboxysome shell carbonic anhydrase 61 509 9.5E-193 T 14-10-2018 IPR014074 Carboxysome shell carbonic anhydrase C4901_10025 aa54667cc73a5a9d2265292d2577eeea 204 SUPERFAMILY SSF143414 138 200 1.27E-9 T 14-10-2018 IPR037233 CcmK-like superfamily C4901_10025 aa54667cc73a5a9d2265292d2577eeea 204 SMART SM00877 138 201 5.4E-13 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_10025 aa54667cc73a5a9d2265292d2577eeea 204 SMART SM00877 34 115 0.3 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_10025 aa54667cc73a5a9d2265292d2577eeea 204 Gene3D G3DSA:3.30.70.1810 2 103 1.6E-41 T 14-10-2018 C4901_10025 aa54667cc73a5a9d2265292d2577eeea 204 Pfam PF00936 BMC domain 142 198 1.4E-7 T 14-10-2018 IPR000249 Microcompartment protein, bacteria C4901_10025 aa54667cc73a5a9d2265292d2577eeea 204 Gene3D G3DSA:3.30.70.1810 104 202 3.4E-34 T 14-10-2018 C4901_08255 75a20f17b3846fb9aa69c35257c26f23 371 Gene3D G3DSA:2.40.30.10 276 361 2.3E-17 T 14-10-2018 C4901_08255 75a20f17b3846fb9aa69c35257c26f23 371 Gene3D G3DSA:3.40.50.620 1 208 7.5E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_08255 75a20f17b3846fb9aa69c35257c26f23 371 Gene3D G3DSA:2.30.30.280 209 273 1.6E-20 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C4901_08255 75a20f17b3846fb9aa69c35257c26f23 371 SUPERFAMILY SSF52402 2 240 1.08E-48 T 14-10-2018 C4901_08255 75a20f17b3846fb9aa69c35257c26f23 371 Pfam PF03054 tRNA methyl transferase 4 354 4.3E-112 T 14-10-2018 C4901_08255 75a20f17b3846fb9aa69c35257c26f23 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 4 354 1.2E-108 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C4901_08255 75a20f17b3846fb9aa69c35257c26f23 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 3 355 35.055 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 C4901_09185 fec30d8b1cb177183831a5b3521396b8 68 SUPERFAMILY SSF143100 1 60 9.68E-14 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like C4901_09185 fec30d8b1cb177183831a5b3521396b8 68 Gene3D G3DSA:3.30.160.250 1 63 2.0E-7 T 14-10-2018 C4901_16705 1cd67517b88f573866f34e3b29ea9fbf 149 Pfam PF04471 Restriction endonuclease 81 124 1.0E-8 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 C4901_16705 1cd67517b88f573866f34e3b29ea9fbf 149 SUPERFAMILY SSF52980 84 127 7.15E-7 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C4901_16405 b700dea962da3ab6ee2b274e474ce88a 158 SUPERFAMILY SSF56271 4 157 1.07E-44 T 14-10-2018 IPR016104 Pyruvoyl-dependent histidine/arginine decarboxylase GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 C4901_16405 b700dea962da3ab6ee2b274e474ce88a 158 TIGRFAM TIGR00286 TIGR00286: arginine decarboxylase, pyruvoyl-dependent 7 157 2.2E-49 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 C4901_16405 b700dea962da3ab6ee2b274e474ce88a 158 Gene3D G3DSA:3.50.20.10 44 157 2.2E-39 T 14-10-2018 IPR016105 Pyruvoyl-dependent histidine/arginine decarboxylase, 3-layer sandwich domain GO:0006520|GO:0016831 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 C4901_16405 b700dea962da3ab6ee2b274e474ce88a 158 Hamap MF_01404 Pyruvoyl-dependent arginine decarboxylase [pdaD]. 1 158 40.81 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 C4901_16405 b700dea962da3ab6ee2b274e474ce88a 158 ProDom PD010449 DECARBOXYLASE PYRUVOYL-DEPENDENT ARGININE SUBUNIT ALPHA CONTAINS: BETA PVLARGDC LYA DECARBOX 3 145 1.0E-33 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 C4901_16405 b700dea962da3ab6ee2b274e474ce88a 158 Pfam PF01862 Pyruvoyl-dependent arginine decarboxylase (PvlArgDC) 5 156 2.0E-45 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 C4901_16405 b700dea962da3ab6ee2b274e474ce88a 158 Gene3D G3DSA:3.30.60.30 1 43 4.4E-18 T 14-10-2018 C4901_16405 b700dea962da3ab6ee2b274e474ce88a 158 PIRSF PIRSF005216 2 158 1.2E-41 T 14-10-2018 IPR002724 Pyruvoyl-dependent arginine decarboxylase GO:0006527|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 C4901_15365 7fea7509fcb1bb62e37cae9ec6712324 176 Pfam PF04471 Restriction endonuclease 49 155 2.2E-17 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 C4901_15365 7fea7509fcb1bb62e37cae9ec6712324 176 SUPERFAMILY SSF52980 54 154 3.16E-13 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 C4901_07155 f8f0573ffd8cbacb4d048789e7b38f1b 150 Pfam PF01521 Iron-sulphur cluster biosynthesis 37 120 1.9E-10 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C4901_07155 f8f0573ffd8cbacb4d048789e7b38f1b 150 SUPERFAMILY SSF89360 37 126 1.82E-19 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_07155 f8f0573ffd8cbacb4d048789e7b38f1b 150 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 38 134 8.3E-20 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C4901_07155 f8f0573ffd8cbacb4d048789e7b38f1b 150 Gene3D G3DSA:2.60.300.12 36 132 4.1E-20 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_01195 9426dbf579786e74da32f119fb143a6d 75 Gene3D G3DSA:3.30.110.40 1 73 8.5E-24 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_01195 9426dbf579786e74da32f119fb143a6d 75 Pfam PF01206 Sulfurtransferase TusA 2 70 1.5E-21 T 14-10-2018 IPR001455 TusA-like domain C4901_01195 9426dbf579786e74da32f119fb143a6d 75 SUPERFAMILY SSF64307 2 70 2.49E-20 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 SUPERFAMILY SSF52540 623 874 3.6E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 SMART SM00490 731 815 3.3E-18 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 Pfam PF00176 SNF2 family N-terminal domain 432 687 4.9E-49 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 Gene3D G3DSA:3.40.50.300 627 829 3.7E-83 T 14-10-2018 C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 Gene3D G3DSA:3.40.50.10810 414 619 4.7E-60 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 Gene3D G3DSA:1.20.120.850 642 866 3.7E-83 T 14-10-2018 C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 Pfam PF12419 SNF2 Helicase protein 232 362 6.8E-32 T 14-10-2018 IPR022138 Helicase SWF/SNF-related C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 SMART SM00487 409 594 2.4E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 SUPERFAMILY SSF52540 389 618 4.62E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02515 6dacf0e4129c692afbb8178aaa94c81d 879 Pfam PF00271 Helicase conserved C-terminal domain 714 815 8.9E-16 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_05735 718805a70016fb617ed5189b306aad47 393 SUPERFAMILY SSF53756 28 381 3.27E-68 T 14-10-2018 C4901_05735 718805a70016fb617ed5189b306aad47 393 Gene3D G3DSA:3.40.50.2000 212 386 9.1E-35 T 14-10-2018 C4901_05735 718805a70016fb617ed5189b306aad47 393 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 29 350 7.7E-51 T 14-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative C4901_05735 718805a70016fb617ed5189b306aad47 393 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 100 356 3.4E-30 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_05735 718805a70016fb617ed5189b306aad47 393 Gene3D G3DSA:3.40.50.2000 22 194 4.9E-28 T 14-10-2018 C4901_02610 ae45a034ba5f744db67de6929cc048d2 124 SUPERFAMILY SSF46626 74 121 1.68E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_02610 ae45a034ba5f744db67de6929cc048d2 124 Gene3D G3DSA:1.10.760.10 63 123 4.6E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_02610 ae45a034ba5f744db67de6929cc048d2 124 Pfam PF00034 Cytochrome c 74 119 1.6E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_01015 ec1d764de737d6ce504c49bd70a08113 243 SUPERFAMILY SSF109755 12 232 6.28E-71 T 14-10-2018 C4901_01015 ec1d764de737d6ce504c49bd70a08113 243 Gene3D G3DSA:1.20.58.220 1 119 2.3E-41 T 14-10-2018 IPR038078 PhoU-like domain superfamily C4901_01015 ec1d764de737d6ce504c49bd70a08113 243 Pfam PF01895 PhoU domain 25 110 6.0E-19 T 14-10-2018 IPR026022 PhoU domain C4901_01015 ec1d764de737d6ce504c49bd70a08113 243 Pfam PF01895 PhoU domain 129 213 8.4E-17 T 14-10-2018 IPR026022 PhoU domain C4901_01015 ec1d764de737d6ce504c49bd70a08113 243 PIRSF PIRSF003107 7 227 1.0E-71 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 C4901_01015 ec1d764de737d6ce504c49bd70a08113 243 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 12 222 1.5E-72 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 C4901_01015 ec1d764de737d6ce504c49bd70a08113 243 Gene3D G3DSA:1.20.58.220 120 238 4.7E-36 T 14-10-2018 IPR038078 PhoU-like domain superfamily C4901_05380 7c3d0611e8bf5c46a0bb6ed18ef5ebaa 335 TIGRFAM TIGR03466 HpnA: hopanoid-associated sugar epimerase 1 326 1.8E-146 T 14-10-2018 IPR017829 Hopanoid-associated sugar epimerase KEGG: 00941+1.1.1.219|MetaCyc: PWY-5152 C4901_05380 7c3d0611e8bf5c46a0bb6ed18ef5ebaa 335 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 228 9.5E-35 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C4901_05380 7c3d0611e8bf5c46a0bb6ed18ef5ebaa 335 SUPERFAMILY SSF51735 1 324 3.06E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_05380 7c3d0611e8bf5c46a0bb6ed18ef5ebaa 335 Gene3D G3DSA:3.40.50.720 1 327 4.2E-117 T 14-10-2018 C4901_12140 6589138965d48ea5438db69108f34c13 287 SUPERFAMILY SSF46689 122 170 1.97E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_12140 6589138965d48ea5438db69108f34c13 287 Pfam PF01527 Transposase 125 172 1.7E-5 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C4901_12390 a23e29ad89ced5cdca801e351c9d8040 165 Gene3D G3DSA:1.20.120.1490 55 155 2.2E-5 T 14-10-2018 C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 PIRSF PIRSF010376 7 281 2.6E-80 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 7 279 3.9E-71 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 SUPERFAMILY SSF54211 8 159 8.35E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 Gene3D G3DSA:3.30.230.10 3 162 1.8E-55 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 Pfam PF00288 GHMP kinases N terminal domain 89 146 1.2E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 SUPERFAMILY SSF55060 162 279 6.71E-24 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 Pfam PF08544 GHMP kinases C terminal 207 260 2.8E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 Gene3D G3DSA:3.30.70.890 163 281 1.8E-22 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily C4901_02410 e81d8502d8dc47df3d1c08081011c10b 291 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 7 273 30.021 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 C4901_05820 f9edd0d81bb6906e1888a5cd443b267f 263 Gene3D G3DSA:3.40.50.720 1 260 2.0E-53 T 14-10-2018 C4901_05820 f9edd0d81bb6906e1888a5cd443b267f 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 7.5E-81 T 14-10-2018 C4901_05820 f9edd0d81bb6906e1888a5cd443b267f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_05820 f9edd0d81bb6906e1888a5cd443b267f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_05820 f9edd0d81bb6906e1888a5cd443b267f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_05820 f9edd0d81bb6906e1888a5cd443b267f 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 4.9E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_05820 f9edd0d81bb6906e1888a5cd443b267f 263 SUPERFAMILY SSF51735 6 257 5.95E-63 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_05820 f9edd0d81bb6906e1888a5cd443b267f 263 PIRSF PIRSF000094 1 262 2.1E-109 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 C4901_03785 902706cbea213f06a637e4c9201fe934 149 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 10 137 28.409 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 C4901_03785 902706cbea213f06a637e4c9201fe934 149 Pfam PF01597 Glycine cleavage H-protein 14 131 1.6E-30 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate C4901_03785 902706cbea213f06a637e4c9201fe934 149 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 54 83 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C4901_03785 902706cbea213f06a637e4c9201fe934 149 Gene3D G3DSA:2.40.50.100 7 133 2.4E-29 T 14-10-2018 C4901_03785 902706cbea213f06a637e4c9201fe934 149 SUPERFAMILY SSF51230 9 116 8.11E-28 T 14-10-2018 IPR011053 Single hybrid motif C4901_03580 30df5e4bdd4a5477aac6b8da630fe4a0 84 SUPERFAMILY SSF55021 11 83 8.1E-9 T 14-10-2018 C4901_03580 30df5e4bdd4a5477aac6b8da630fe4a0 84 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 11 84 8.0E-5 T 14-10-2018 C4901_03580 30df5e4bdd4a5477aac6b8da630fe4a0 84 Gene3D G3DSA:3.30.70.260 9 84 5.4E-9 T 14-10-2018 C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 Gene3D G3DSA:3.40.50.300 598 719 1.2E-26 T 14-10-2018 C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 Gene3D G3DSA:3.40.50.300 342 442 2.6E-17 T 14-10-2018 C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 Pfam PF00580 UvrD/REP helicase N-terminal domain 71 331 3.8E-44 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 Pfam PF12705 PD-(D/E)XK nuclease superfamily 737 967 3.4E-24 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 SUPERFAMILY SSF52540 70 709 6.95E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 Pfam PF13361 UvrD-like helicase C-terminal domain 513 691 6.3E-21 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 Gene3D G3DSA:1.10.10.160 175 250 8.1E-60 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 Gene3D G3DSA:3.40.50.300 75 333 8.1E-60 T 14-10-2018 C4901_15665 52b7870e3e0486d7b9844d7bcd2c9839 970 Pfam PF13361 UvrD-like helicase C-terminal domain 340 446 1.8E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C4901_14125 1525d7df0491d60853552bf745253186 220 Gene3D G3DSA:2.40.30.10 131 213 2.4E-15 T 14-10-2018 C4901_14125 1525d7df0491d60853552bf745253186 220 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 207 1.1E-84 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14125 1525d7df0491d60853552bf745253186 220 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 210 38.22 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14125 1525d7df0491d60853552bf745253186 220 Gene3D G3DSA:2.40.50.620 33 99 4.0E-15 T 14-10-2018 C4901_14125 1525d7df0491d60853552bf745253186 220 ProSitePatterns PS00474 Ribosomal protein L3 signature. 104 127 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site C4901_14125 1525d7df0491d60853552bf745253186 220 Pfam PF00297 Ribosomal protein L3 102 185 7.8E-15 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_14125 1525d7df0491d60853552bf745253186 220 SUPERFAMILY SSF50447 2 214 2.12E-77 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily C4901_04920 f0bcc7394bfe6b35a0e62d44d0ce67b4 256 Gene3D G3DSA:3.40.50.1000 13 242 8.9E-49 T 14-10-2018 IPR023214 HAD superfamily C4901_04920 f0bcc7394bfe6b35a0e62d44d0ce67b4 256 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 11 244 5.3E-38 T 14-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal C4901_04920 f0bcc7394bfe6b35a0e62d44d0ce67b4 256 Gene3D G3DSA:3.90.1070.10 99 165 8.9E-49 T 14-10-2018 C4901_04920 f0bcc7394bfe6b35a0e62d44d0ce67b4 256 SUPERFAMILY SSF56784 11 214 1.78E-24 T 14-10-2018 IPR036412 HAD-like superfamily C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 SUPERFAMILY SSF55681 10 472 1.38E-104 T 14-10-2018 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 565 40.93 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 Gene3D G3DSA:3.90.960.10 240 383 7.6E-235 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 559 4.2E-229 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 Pfam PF04073 Aminoacyl-tRNA editing domain 258 373 1.1E-21 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 PIRSF PIRSF001535 1 566 9.4E-257 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 Pfam PF03129 Anticodon binding domain 470 561 4.8E-15 T 14-10-2018 IPR004154 Anticodon-binding C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 SUPERFAMILY SSF52954 458 565 2.62E-29 T 14-10-2018 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 Gene3D G3DSA:3.30.930.10 11 459 7.6E-235 T 14-10-2018 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 SUPERFAMILY SSF55826 218 383 9.03E-26 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.2E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.2E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.2E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.2E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 453 3.6E-47 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_04220 551e18a87eaa835d8b028f1076af6a43 566 Gene3D G3DSA:3.40.50.800 6 547 7.6E-235 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily C4901_10730 2416bc0e2cc34cda4dc4a279602cce5a 127 Pfam PF00034 Cytochrome c 77 122 2.5E-4 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_10730 2416bc0e2cc34cda4dc4a279602cce5a 127 SUPERFAMILY SSF46626 77 124 5.05E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_10730 2416bc0e2cc34cda4dc4a279602cce5a 127 Gene3D G3DSA:1.10.760.10 70 126 1.0E-13 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_08090 ce9c323ec210595d8f08c0e239fd31b5 286 Gene3D G3DSA:3.40.50.1000 156 285 1.9E-16 T 14-10-2018 IPR023214 HAD superfamily C4901_08090 ce9c323ec210595d8f08c0e239fd31b5 286 Gene3D G3DSA:3.40.50.1000 51 148 7.9E-13 T 14-10-2018 IPR023214 HAD superfamily C4901_08090 ce9c323ec210595d8f08c0e239fd31b5 286 SUPERFAMILY SSF56784 52 281 7.17E-26 T 14-10-2018 IPR036412 HAD-like superfamily C4901_08090 ce9c323ec210595d8f08c0e239fd31b5 286 Pfam PF02358 Trehalose-phosphatase 56 257 4.4E-13 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 C4901_04445 ed278cc70f4061503f5d933e0b0513da 115 Pfam PF04355 SmpA / OmlA family 30 99 3.9E-19 T 14-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 C4901_04445 ed278cc70f4061503f5d933e0b0513da 115 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 3 114 23.502 T 14-10-2018 IPR026592 Outer membrane protein assembly factor BamE C4901_04445 ed278cc70f4061503f5d933e0b0513da 115 Gene3D G3DSA:3.30.1450.10 29 109 4.2E-24 T 14-10-2018 IPR037873 BamE-like C4901_04365 86c5654e080571edf4667d574ed2b514 78 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 43 2.8E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_04365 86c5654e080571edf4667d574ed2b514 78 Gene3D G3DSA:2.10.260.10 1 78 7.0E-14 T 14-10-2018 C4901_04365 86c5654e080571edf4667d574ed2b514 78 SUPERFAMILY SSF89447 3 66 8.37E-10 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_06590 f81aa31de962151637ea20c275141c1e 93 Gene3D G3DSA:1.10.260.40 8 83 4.1E-12 T 14-10-2018 C4901_06590 f81aa31de962151637ea20c275141c1e 93 SUPERFAMILY SSF47413 15 72 7.51E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_13225 f8653f7b0fe1629ba0183606bbf6da5d 30 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 1.0E-8 T 14-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 C4901_13225 f8653f7b0fe1629ba0183606bbf6da5d 30 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 2.0E-10 T 14-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 C4901_01920 e861b1e497444c77991e88ed93bb729a 442 SUPERFAMILY SSF81340 8 424 4.84E-89 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 C4901_01920 e861b1e497444c77991e88ed93bb729a 442 Gene3D G3DSA:1.10.3080.10 17 432 5.2E-85 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 C4901_01920 e861b1e497444c77991e88ed93bb729a 442 PRINTS PR00762 Chloride channel signature 116 135 9.4E-22 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_01920 e861b1e497444c77991e88ed93bb729a 442 PRINTS PR00762 Chloride channel signature 377 396 9.4E-22 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_01920 e861b1e497444c77991e88ed93bb729a 442 PRINTS PR00762 Chloride channel signature 168 187 9.4E-22 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_01920 e861b1e497444c77991e88ed93bb729a 442 PRINTS PR00762 Chloride channel signature 82 99 9.4E-22 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_01920 e861b1e497444c77991e88ed93bb729a 442 Pfam PF00654 Voltage gated chloride channel 69 409 1.9E-81 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 C4901_05440 e24e0f5701f99b5beb62e79d6fa33291 299 SUPERFAMILY SSF54593 167 295 1.2E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_05440 e24e0f5701f99b5beb62e79d6fa33291 299 Gene3D G3DSA:3.10.180.10 2 151 7.5E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_05440 e24e0f5701f99b5beb62e79d6fa33291 299 SUPERFAMILY SSF54593 6 198 1.79E-28 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_05440 e24e0f5701f99b5beb62e79d6fa33291 299 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 147 3.3E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C4901_05440 e24e0f5701f99b5beb62e79d6fa33291 299 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 168 294 7.0E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain C4901_05440 e24e0f5701f99b5beb62e79d6fa33291 299 Gene3D G3DSA:3.10.180.10 161 297 2.5E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase C4901_06965 8fa1f7592c3e5eb1bb5fcf9ca63ff193 208 Pfam PF05656 Protein of unknown function (DUF805) 38 191 1.5E-23 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 C4901_09695 28cc47fe6bd9781eac6d2d563e741980 163 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 8 163 33.155 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_09695 28cc47fe6bd9781eac6d2d563e741980 163 SUPERFAMILY SSF55040 17 160 5.36E-54 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_09695 28cc47fe6bd9781eac6d2d563e741980 163 Gene3D G3DSA:3.30.70.640 8 163 2.3E-61 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_09695 28cc47fe6bd9781eac6d2d563e741980 163 Pfam PF01967 MoaC family 21 155 5.8E-50 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_09695 28cc47fe6bd9781eac6d2d563e741980 163 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 10 157 1.6E-55 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 C4901_04040 dd3074d8c7e31faff055eb25c9557d6c 51 Pfam PF00471 Ribosomal protein L33 4 49 8.0E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04040 dd3074d8c7e31faff055eb25c9557d6c 51 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_04040 dd3074d8c7e31faff055eb25c9557d6c 51 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 51 5.5E-22 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04040 dd3074d8c7e31faff055eb25c9557d6c 51 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 14.429 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04040 dd3074d8c7e31faff055eb25c9557d6c 51 Gene3D G3DSA:2.20.28.120 1 51 8.8E-26 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_04040 dd3074d8c7e31faff055eb25c9557d6c 51 SUPERFAMILY SSF57829 1 49 2.38E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 C4901_07325 1bd73b44afff8d60e0b535f8a59cfb6b 141 Pfam PF08751 TrwC relaxase 16 139 1.3E-24 T 14-10-2018 IPR014862 TrwC relaxase C4901_07325 1bd73b44afff8d60e0b535f8a59cfb6b 141 SUPERFAMILY SSF55464 9 140 5.04E-23 T 14-10-2018 C4901_12435 2a9d117c13a348601981443c0d1aab7c 157 Pfam PF01641 SelR domain 29 145 5.5E-47 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 C4901_12435 2a9d117c13a348601981443c0d1aab7c 157 Gene3D G3DSA:2.170.150.20 22 156 9.7E-56 T 14-10-2018 C4901_12435 2a9d117c13a348601981443c0d1aab7c 157 SUPERFAMILY SSF51316 26 150 7.32E-53 T 14-10-2018 IPR011057 Mss4-like superfamily C4901_12435 2a9d117c13a348601981443c0d1aab7c 157 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 28 147 1.8E-46 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 C4901_04020 1324aa3b41732384a2240dce2ae6d4c9 224 Gene3D G3DSA:3.40.140.10 100 224 8.9E-39 T 14-10-2018 C4901_04020 1324aa3b41732384a2240dce2ae6d4c9 224 Pfam PF04002 RadC-like JAB domain 107 222 1.6E-39 T 14-10-2018 IPR025657 RadC-like JAB domain C4901_04020 1324aa3b41732384a2240dce2ae6d4c9 224 SUPERFAMILY SSF102712 112 193 1.05E-5 T 14-10-2018 C4901_04020 1324aa3b41732384a2240dce2ae6d4c9 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 2.2E-70 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 C4901_04020 1324aa3b41732384a2240dce2ae6d4c9 224 SUPERFAMILY SSF47781 15 90 1.85E-8 T 14-10-2018 IPR010994 RuvA domain 2-like C4901_04020 1324aa3b41732384a2240dce2ae6d4c9 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site C4901_13200 65552a6bb62c8dafe5cea116ccd62c3c 202 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 4.8E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_13200 65552a6bb62c8dafe5cea116ccd62c3c 202 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 6.7E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_09445 028bdeb1d0d100612f99a376e47a0722 556 Pfam PF01368 DHH family 63 188 3.6E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 C4901_09445 028bdeb1d0d100612f99a376e47a0722 556 Gene3D G3DSA:3.90.1640.30 37 306 2.7E-86 T 14-10-2018 C4901_09445 028bdeb1d0d100612f99a376e47a0722 556 SUPERFAMILY SSF64182 39 437 1.18E-105 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily C4901_09445 028bdeb1d0d100612f99a376e47a0722 556 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 15 546 5.9E-131 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 C4901_09445 028bdeb1d0d100612f99a376e47a0722 556 Gene3D G3DSA:3.10.310.30 308 435 6.2E-27 T 14-10-2018 C4901_09445 028bdeb1d0d100612f99a376e47a0722 556 Pfam PF02272 DHHA1 domain 302 428 1.8E-17 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 Pfam PF00334 Nucleoside diphosphate kinase 4 138 2.0E-55 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.915 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 SUPERFAMILY SSF54919 1 141 1.83E-57 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 Gene3D G3DSA:3.30.70.141 1 143 3.9E-57 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 SMART SM00562 3 140 3.4E-85 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 4.5E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 4.5E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 4.5E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 4.5E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_10825 55ed2fb12078ee5751b846e1d8ee6040 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 4.5E-37 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 251 6.6E-66 T 14-10-2018 C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 SUPERFAMILY SSF51735 8 253 1.71E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 2.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.1E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 Gene3D G3DSA:3.40.50.720 2 259 6.5E-84 T 14-10-2018 C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 9.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 9.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 9.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 9.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 9.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_09825 837dd5e8bd0d2f2a147f595c5665849e 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 9.3E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15195 0f7095a9bfc10ee42581bcdfb0a42231 228 Pfam PF07963 Prokaryotic N-terminal methylation motif 12 33 4.7E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_15195 0f7095a9bfc10ee42581bcdfb0a42231 228 Gene3D G3DSA:3.30.700.10 14 132 1.2E-14 T 14-10-2018 C4901_15195 0f7095a9bfc10ee42581bcdfb0a42231 228 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_15195 0f7095a9bfc10ee42581bcdfb0a42231 228 SUPERFAMILY SSF54523 14 122 1.1E-13 T 14-10-2018 C4901_15195 0f7095a9bfc10ee42581bcdfb0a42231 228 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 12 34 3.1E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_02195 244378a5ba61a4751f36e99e948a758d 116 Gene3D G3DSA:1.10.287.1080 1 107 6.6E-38 T 14-10-2018 C4901_02195 244378a5ba61a4751f36e99e948a758d 116 SUPERFAMILY SSF101386 4 114 2.33E-39 T 14-10-2018 C4901_02195 244378a5ba61a4751f36e99e948a758d 116 Pfam PF12643 MazG-like family 35 114 4.6E-13 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 C4901_02195 244378a5ba61a4751f36e99e948a758d 116 PIRSF PIRSF029826 1 115 6.5E-47 T 14-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 SUPERFAMILY SSF48179 182 318 4.65E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 Gene3D G3DSA:3.40.50.720 1 179 1.3E-47 T 14-10-2018 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 SUPERFAMILY SSF51735 1 155 2.12E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 153 1.7E-38 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 281 314 1.8E-5 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 184 212 8.2E-9 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 SMART SM01350 184 335 4.1E-5 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 335 8.2E-123 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 1.4E-13 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 111 136 1.4E-13 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 58 87 1.4E-13 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 C4901_05920 43d48abc3f6e675ad392acb7e289b49c 336 Gene3D G3DSA:1.10.1040.10 180 336 4.5E-57 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 C4901_13180 d1fe542fc560d6d33454ccd70f2d4006 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 1.1E-11 T 14-10-2018 IPR003004 GspF/PilC family C4901_13180 d1fe542fc560d6d33454ccd70f2d4006 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 1.1E-11 T 14-10-2018 IPR003004 GspF/PilC family C4901_13180 d1fe542fc560d6d33454ccd70f2d4006 405 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 1.1E-11 T 14-10-2018 IPR003004 GspF/PilC family C4901_13180 d1fe542fc560d6d33454ccd70f2d4006 405 Pfam PF00482 Type II secretion system (T2SS), protein F 70 192 8.7E-20 T 14-10-2018 IPR018076 Type II secretion system F domain C4901_13180 d1fe542fc560d6d33454ccd70f2d4006 405 Pfam PF00482 Type II secretion system (T2SS), protein F 273 392 1.3E-21 T 14-10-2018 IPR018076 Type II secretion system F domain C4901_13180 d1fe542fc560d6d33454ccd70f2d4006 405 Gene3D G3DSA:1.20.81.30 57 171 2.1E-17 T 14-10-2018 C4901_13180 d1fe542fc560d6d33454ccd70f2d4006 405 Gene3D G3DSA:1.20.81.30 255 368 3.7E-19 T 14-10-2018 C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 Pfam PF00563 EAL domain 394 634 4.8E-58 T 14-10-2018 IPR001633 EAL domain C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 212 377 1.9E-35 T 14-10-2018 IPR000160 GGDEF domain C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 SUPERFAMILY SSF55073 220 378 1.41E-44 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 SMART SM00267 204 378 6.9E-55 T 14-10-2018 IPR000160 GGDEF domain C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 SMART SM00052 388 639 4.3E-79 T 14-10-2018 IPR001633 EAL domain C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 SUPERFAMILY SSF141868 394 646 2.62E-72 T 14-10-2018 IPR035919 EAL domain superfamily C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 Gene3D G3DSA:3.20.20.450 390 654 2.2E-77 T 14-10-2018 IPR035919 EAL domain superfamily C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 Gene3D G3DSA:3.30.70.270 210 384 6.1E-50 T 14-10-2018 C4901_14815 b8aad4f747e3f0b183f60d64a75cfc94 655 Pfam PF00990 Diguanylate cyclase, GGDEF domain 215 374 9.5E-40 T 14-10-2018 IPR000160 GGDEF domain C4901_03365 d0f252341d64ffd1a02373e053dc2a03 93 Hamap MF_00910 Cell division protein FtsL [ftsL]. 2 85 13.9 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C4901_03365 d0f252341d64ffd1a02373e053dc2a03 93 Pfam PF04999 Cell division protein FtsL 3 86 2.2E-19 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C4901_03365 d0f252341d64ffd1a02373e053dc2a03 93 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 4 84 2.1E-15 T 14-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 C4901_07735 37d3670b132f35a71966984b58084741 88 Pfam PF00550 Phosphopantetheine attachment site 12 66 7.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain C4901_07735 37d3670b132f35a71966984b58084741 88 SUPERFAMILY SSF47336 4 86 1.18E-12 T 14-10-2018 IPR036736 ACP-like superfamily C4901_07735 37d3670b132f35a71966984b58084741 88 Gene3D G3DSA:1.10.1200.10 7 87 5.2E-16 T 14-10-2018 IPR036736 ACP-like superfamily C4901_06145 f5f4b69d6a027245288368871fee0c8a 330 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 22 307 17.3 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 C4901_06145 f5f4b69d6a027245288368871fee0c8a 330 Pfam PF01040 UbiA prenyltransferase family 39 273 7.5E-49 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 C4901_06145 f5f4b69d6a027245288368871fee0c8a 330 Gene3D G3DSA:1.10.357.140 28 183 2.1E-15 T 14-10-2018 C4901_06145 f5f4b69d6a027245288368871fee0c8a 330 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 77 99 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site C4901_06145 f5f4b69d6a027245288368871fee0c8a 330 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 25 305 5.7E-77 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 C4901_10510 7f7179fddace7b9c914a6d6680feb57a 456 Pfam PF13520 Amino acid permease 3 424 9.4E-48 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C4901_10510 7f7179fddace7b9c914a6d6680feb57a 456 PIRSF PIRSF006060 1 454 1.0E-74 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 Gene3D G3DSA:2.120.10.30 167 436 5.3E-86 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 Pfam PF07676 WD40-like Beta Propeller Repeat 206 227 0.0082 T 14-10-2018 IPR011659 WD40-like Beta Propeller C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 Pfam PF07676 WD40-like Beta Propeller Repeat 285 320 2.1E-10 T 14-10-2018 IPR011659 WD40-like Beta Propeller C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 Pfam PF07676 WD40-like Beta Propeller Repeat 330 361 1.2E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 Pfam PF07676 WD40-like Beta Propeller Repeat 249 277 4.6E-4 T 14-10-2018 IPR011659 WD40-like Beta Propeller C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 SUPERFAMILY SSF52964 31 163 2.62E-27 T 14-10-2018 C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 SUPERFAMILY SSF69304 157 433 7.19E-53 T 14-10-2018 C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 432 6.0E-132 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 Gene3D G3DSA:3.40.50.10070 22 166 7.0E-33 T 14-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 6 431 39.981 T 14-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 C4901_13785 6ec147ce51896ffe4e49fa2c660ae436 437 Pfam PF04052 TolB amino-terminal domain 25 131 6.1E-22 T 14-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 Gene3D G3DSA:3.40.47.10 1 255 5.0E-96 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 4.8E-198 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 1.3E-39 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 PIRSF PIRSF000447 1 413 2.6E-189 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 SMART SM00825 Beta-ketoacyl synthase 6 413 7.9E-19 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 SUPERFAMILY SSF53901 4 252 4.61E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 Gene3D G3DSA:3.40.47.10 257 401 7.7E-56 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 SUPERFAMILY SSF53901 214 412 9.6E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_08845 2fa4d5bdf68c4143edc4869876e87fa3 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 4.7E-63 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal C4901_06455 91d8df37fbc862e89e0efad009a145d9 413 Gene3D G3DSA:3.50.50.60 31 386 1.2E-101 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06455 91d8df37fbc862e89e0efad009a145d9 413 Gene3D G3DSA:3.30.9.10 112 343 1.2E-101 T 14-10-2018 C4901_06455 91d8df37fbc862e89e0efad009a145d9 413 SUPERFAMILY SSF54373 259 341 4.97E-8 T 14-10-2018 C4901_06455 91d8df37fbc862e89e0efad009a145d9 413 SUPERFAMILY SSF51905 30 398 1.65E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06455 91d8df37fbc862e89e0efad009a145d9 413 Pfam PF01266 FAD dependent oxidoreductase 31 378 3.5E-52 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 C4901_14055 319d4b2cba3bf2a4f7f62401d827e48f 128 Pfam PF00410 Ribosomal protein S8 3 127 1.6E-43 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14055 319d4b2cba3bf2a4f7f62401d827e48f 128 SUPERFAMILY SSF56047 1 127 4.32E-41 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14055 319d4b2cba3bf2a4f7f62401d827e48f 128 Gene3D G3DSA:3.30.1490.10 71 127 5.7E-20 T 14-10-2018 C4901_14055 319d4b2cba3bf2a4f7f62401d827e48f 128 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 1 128 27.445 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14055 319d4b2cba3bf2a4f7f62401d827e48f 128 Gene3D G3DSA:3.30.1370.30 1 70 1.2E-25 T 14-10-2018 C4901_14055 319d4b2cba3bf2a4f7f62401d827e48f 128 ProSitePatterns PS00053 Ribosomal protein S8 signature. 98 115 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_17120 b855320767fe969bc84fd6e3610ab073 70 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 4.0E-17 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C4901_17120 b855320767fe969bc84fd6e3610ab073 70 SMART SM01234 1 68 7.8E-46 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C4901_17120 b855320767fe969bc84fd6e3610ab073 70 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 69 4.9E-30 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C4901_17120 b855320767fe969bc84fd6e3610ab073 70 Pfam PF01809 Haemolytic domain 3 68 1.8E-31 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C4901_17120 b855320767fe969bc84fd6e3610ab073 70 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 24.936 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor C4901_04985 0e97741ba96b9feb3834f7def415f7ef 197 Gene3D G3DSA:3.10.610.10 33 143 4.1E-11 T 14-10-2018 C4901_04985 0e97741ba96b9feb3834f7def415f7ef 197 SUPERFAMILY SSF54523 47 195 4.32E-26 T 14-10-2018 C4901_04985 0e97741ba96b9feb3834f7def415f7ef 197 Pfam PF11612 Type II secretion system (T2SS), protein J 57 193 1.1E-25 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 C4901_04985 0e97741ba96b9feb3834f7def415f7ef 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04985 0e97741ba96b9feb3834f7def415f7ef 197 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 5 194 1.1E-20 T 14-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 C4901_04985 0e97741ba96b9feb3834f7def415f7ef 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 27 3.5E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_04985 0e97741ba96b9feb3834f7def415f7ef 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 27 7.3E-10 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 SUPERFAMILY SSF53335 1 259 4.28E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 Gene3D G3DSA:3.40.50.150 1 279 3.2E-68 T 14-10-2018 C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 Pfam PF01555 DNA methylase 9 255 5.5E-47 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 12 18 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 54 74 4.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 8 22 4.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 239 259 4.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 216 234 4.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 C4901_16895 f7baefc15d6ddb821badcc354d4c5328 406 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 197 214 4.8E-28 T 14-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 C4901_04105 b83cd80625897cd7c3f09fdf77baea54 200 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 3 195 7.7E-47 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 C4901_04105 b83cd80625897cd7c3f09fdf77baea54 200 Pfam PF03358 NADPH-dependent FMN reductase 3 139 1.7E-10 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 C4901_04105 b83cd80625897cd7c3f09fdf77baea54 200 Gene3D G3DSA:3.40.50.360 1 196 4.1E-65 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C4901_04105 b83cd80625897cd7c3f09fdf77baea54 200 SUPERFAMILY SSF52218 1 195 1.21E-59 T 14-10-2018 IPR029039 Flavoprotein-like superfamily C4901_16485 de2b8fcca1cda271c21d7bb4ebeb5a05 214 SUPERFAMILY SSF101874 41 211 9.29E-48 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily C4901_16485 de2b8fcca1cda271c21d7bb4ebeb5a05 214 Pfam PF04264 YceI-like domain 43 208 4.4E-37 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like C4901_16485 de2b8fcca1cda271c21d7bb4ebeb5a05 214 Gene3D G3DSA:2.40.128.110 41 212 2.1E-44 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily C4901_16485 de2b8fcca1cda271c21d7bb4ebeb5a05 214 SMART SM00867 42 210 2.4E-51 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 SUPERFAMILY SSF101790 874 963 9.16E-16 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 SUPERFAMILY SSF103025 581 870 1.24E-81 T 14-10-2018 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 SUPERFAMILY SSF51905 166 450 8.43E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 Pfam PF01571 Aminomethyltransferase folate-binding domain 588 850 2.5E-69 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 167 441 2.3E-12 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 Gene3D G3DSA:3.30.1360.120 579 955 8.5E-94 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 394 408 9.1E-8 T 14-10-2018 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 189 9.1E-8 T 14-10-2018 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 858 948 1.5E-15 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 19 99 3.6E-21 T 14-10-2018 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 Gene3D G3DSA:3.10.20.440 14 101 1.9E-9 T 14-10-2018 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 393 409 2.1E-7 T 14-10-2018 C4901_06445 6d4b3b10eea7978934188e9a911599e3 966 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 168 187 2.1E-7 T 14-10-2018 C4901_02810 5b998c7e61874f8ed55f84b3c5849c9c 249 Pfam PF00753 Metallo-beta-lactamase superfamily 12 171 7.1E-11 T 14-10-2018 IPR001279 Metallo-beta-lactamase C4901_02810 5b998c7e61874f8ed55f84b3c5849c9c 249 SUPERFAMILY SSF56281 1 195 9.66E-52 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_02810 5b998c7e61874f8ed55f84b3c5849c9c 249 SMART SM00849 12 171 3.6E-26 T 14-10-2018 IPR001279 Metallo-beta-lactamase C4901_02810 5b998c7e61874f8ed55f84b3c5849c9c 249 Gene3D G3DSA:3.60.15.10 1 234 3.1E-75 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_01005 401c4c1fb4b75a7299816bac75c386d4 420 Gene3D G3DSA:2.40.160.10 16 420 1.6E-28 T 14-10-2018 IPR023614 Porin domain superfamily C4901_01005 401c4c1fb4b75a7299816bac75c386d4 420 Pfam PF03573 outer membrane porin, OprD family 121 293 2.8E-13 T 14-10-2018 IPR005318 Outer membrane porin, bacterial GO:0016021 C4901_15440 2425af98cc4b962e716a4bf0c521cd5f 103 Pfam PF13560 Helix-turn-helix domain 39 94 4.3E-13 T 14-10-2018 C4901_15440 2425af98cc4b962e716a4bf0c521cd5f 103 SUPERFAMILY SSF47413 30 101 1.54E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_15440 2425af98cc4b962e716a4bf0c521cd5f 103 SMART SM00530 42 98 6.7E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_15440 2425af98cc4b962e716a4bf0c521cd5f 103 Gene3D G3DSA:1.10.260.40 14 101 5.1E-17 T 14-10-2018 C4901_15105 a3b328dd3f2b377a187d9a99ed628569 141 Pfam PF11740 Plasmid replication region DNA-binding N-term 91 133 1.7E-6 T 14-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 361 3.6E-46 T 14-10-2018 IPR000160 GGDEF domain C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 SUPERFAMILY SSF55073 209 363 4.47E-47 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 SMART SM00267 193 365 3.9E-63 T 14-10-2018 IPR000160 GGDEF domain C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 Gene3D G3DSA:3.20.20.450 378 635 5.8E-78 T 14-10-2018 IPR035919 EAL domain superfamily C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 Gene3D G3DSA:3.30.70.270 198 369 5.5E-56 T 14-10-2018 C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 SMART SM00052 375 623 6.2E-70 T 14-10-2018 IPR001633 EAL domain C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 SUPERFAMILY SSF141868 382 632 6.93E-71 T 14-10-2018 IPR035919 EAL domain superfamily C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 Pfam PF00563 EAL domain 383 618 1.8E-61 T 14-10-2018 IPR001633 EAL domain C4901_15010 0601aeedcb8a7d717e6cb1e5323f408f 677 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 363 6.8E-43 T 14-10-2018 IPR000160 GGDEF domain C4901_12985 c4b154cbd7e71563ae7c7d31dbd179e9 156 SUPERFAMILY SSF75169 4 154 1.44E-19 T 14-10-2018 IPR027396 DsrEFH-like C4901_12985 c4b154cbd7e71563ae7c7d31dbd179e9 156 Pfam PF13686 DsrE/DsrF/DrsH-like family 3 155 6.2E-54 T 14-10-2018 IPR032836 DsrE2-like family C4901_12985 c4b154cbd7e71563ae7c7d31dbd179e9 156 Gene3D G3DSA:3.40.1260.10 1 156 5.1E-41 T 14-10-2018 IPR027396 DsrEFH-like C4901_09910 407ec3fdccbb48a39ad253a95cca9aa5 139 SUPERFAMILY SSF52833 3 124 7.46E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_09910 407ec3fdccbb48a39ad253a95cca9aa5 139 Gene3D G3DSA:3.40.30.10 1 130 6.6E-21 T 14-10-2018 C4901_05410 cd17e79ba5a8ae9f086f5c477dc2c139 353 Gene3D G3DSA:1.10.600.10 16 343 1.9E-93 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C4901_05410 cd17e79ba5a8ae9f086f5c477dc2c139 353 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 164 179 - T 14-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 C4901_05410 cd17e79ba5a8ae9f086f5c477dc2c139 353 SUPERFAMILY SSF48576 17 329 2.59E-57 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C4901_05410 cd17e79ba5a8ae9f086f5c477dc2c139 353 Pfam PF00494 Squalene/phytoene synthase 26 316 3.0E-55 T 14-10-2018 C4901_10040 9dca75bd12aef6b0699abae435b0d212 1054 Hamap MF_01871 UPF0753 protein . 10 1022 23.915 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 C4901_10040 9dca75bd12aef6b0699abae435b0d212 1054 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 17 1007 2.4E-267 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 SUPERFAMILY SSF53784 2 413 1.44E-111 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 PIRSF PIRSF036483 3 419 1.9E-207 T 14-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 Pfam PF00365 Phosphofructokinase 11 325 8.2E-47 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 Hamap MF_01978 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 4 400 44.48 T 14-10-2018 IPR011404 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase, XF0274 GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 Gene3D G3DSA:3.40.50.450 6 401 9.6E-154 T 14-10-2018 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 Gene3D G3DSA:3.40.50.460 143 388 9.6E-154 T 14-10-2018 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 180 196 1.6E-11 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 155 1.6E-11 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 238 250 1.6E-11 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C4901_01035 4e8274e8e90245864622b9ffd49507d7 421 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 1.6E-11 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 C4901_06005 094673b3050b6316d49a8a571c0a1328 133 Pfam PF13767 Domain of unknown function (DUF4168) 52 127 2.6E-15 T 14-10-2018 IPR025433 Domain of unknown function DUF4168 C4901_05965 094673b3050b6316d49a8a571c0a1328 133 Pfam PF13767 Domain of unknown function (DUF4168) 52 127 2.6E-15 T 14-10-2018 IPR025433 Domain of unknown function DUF4168 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 Pfam PF00534 Glycosyl transferases group 1 615 789 3.4E-10 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 Pfam PF00534 Glycosyl transferases group 1 1059 1203 5.4E-24 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 Pfam PF00534 Glycosyl transferases group 1 223 379 1.3E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 SUPERFAMILY SSF53756 869 1229 2.24E-44 T 14-10-2018 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 Gene3D G3DSA:3.40.50.2000 91 393 4.9E-49 T 14-10-2018 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 Gene3D G3DSA:3.40.50.2000 199 383 4.9E-49 T 14-10-2018 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 SUPERFAMILY SSF53756 425 813 1.78E-36 T 14-10-2018 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 SUPERFAMILY SSF53756 16 402 1.32E-61 T 14-10-2018 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 Gene3D G3DSA:3.40.50.2000 1034 1213 3.5E-28 T 14-10-2018 C4901_06705 1f8b6a52277af1d52bbff0fc8ab65712 1241 Gene3D G3DSA:3.40.50.2000 611 791 1.1E-22 T 14-10-2018 C4901_08935 66ea2af346cf5373d161b74ef99f062c 264 PIRSF PIRSF016184 2 264 1.4E-51 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 C4901_08935 66ea2af346cf5373d161b74ef99f062c 264 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 2 107 1.3E-23 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 C4901_08935 66ea2af346cf5373d161b74ef99f062c 264 SUPERFAMILY SSF54506 4 263 6.46E-82 T 14-10-2018 C4901_08935 66ea2af346cf5373d161b74ef99f062c 264 Gene3D G3DSA:3.10.310.10 117 252 1.0E-91 T 14-10-2018 C4901_08935 66ea2af346cf5373d161b74ef99f062c 264 Pfam PF02567 Phenazine biosynthesis-like protein 8 260 3.9E-56 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 C4901_08935 66ea2af346cf5373d161b74ef99f062c 264 Gene3D G3DSA:3.10.310.10 6 256 1.0E-91 T 14-10-2018 C4901_13525 b331ab0a4b6c980bb080b7ac57ea4aa4 293 Pfam PF03050 Transposase IS66 family 83 282 1.1E-16 T 14-10-2018 IPR004291 Transposase, IS66 C4901_13635 b331ab0a4b6c980bb080b7ac57ea4aa4 293 Pfam PF03050 Transposase IS66 family 83 282 1.1E-16 T 14-10-2018 IPR004291 Transposase, IS66 C4901_12155 b331ab0a4b6c980bb080b7ac57ea4aa4 293 Pfam PF03050 Transposase IS66 family 83 282 1.1E-16 T 14-10-2018 IPR004291 Transposase, IS66 C4901_02010 276d9652e08b677486aea41879af2ae4 348 Pfam PF10040 CRISPR-associated endoribonuclease Cas6 204 326 8.9E-14 T 14-10-2018 IPR019267 CRISPR-associated protein Cas6, C-terminal C4901_02010 276d9652e08b677486aea41879af2ae4 348 Gene3D G3DSA:3.30.70.1900 194 330 2.7E-9 T 14-10-2018 C4901_08250 6ea241d6d6c38d530e5a0b3b5a500944 206 SMART SM00986 32 188 7.3E-23 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_08250 6ea241d6d6c38d530e5a0b3b5a500944 206 Gene3D G3DSA:3.40.470.10 5 198 3.8E-55 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_08250 6ea241d6d6c38d530e5a0b3b5a500944 206 Pfam PF03167 Uracil DNA glycosylase superfamily 35 184 4.4E-21 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_08250 6ea241d6d6c38d530e5a0b3b5a500944 206 SMART SM00987 32 188 7.3E-23 T 14-10-2018 C4901_08250 6ea241d6d6c38d530e5a0b3b5a500944 206 SUPERFAMILY SSF52141 9 195 1.96E-42 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 C4901_07265 a1730e395b348f1c8879e2cacf9dfe78 432 Gene3D G3DSA:1.20.1530.20 19 422 4.7E-85 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily C4901_07265 a1730e395b348f1c8879e2cacf9dfe78 432 Pfam PF00999 Sodium/hydrogen exchanger family 25 415 6.9E-46 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 C4901_07425 5dbf0a1250a45e4c2c678e4897f9d9c3 125 Gene3D G3DSA:2.60.40.1220 27 125 3.2E-23 T 14-10-2018 C4901_07425 5dbf0a1250a45e4c2c678e4897f9d9c3 125 Pfam PF04234 CopC domain 27 123 3.9E-18 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 C4901_07425 5dbf0a1250a45e4c2c678e4897f9d9c3 125 SUPERFAMILY SSF81296 26 124 1.71E-21 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_03200 a7382cbc0b8a47bcfe699564c92e8634 497 Gene3D G3DSA:1.10.286.90 222 246 2.8E-6 T 14-10-2018 C4901_03200 a7382cbc0b8a47bcfe699564c92e8634 497 Pfam PF00083 Sugar (and other) transporter 65 475 3.6E-37 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 C4901_03200 a7382cbc0b8a47bcfe699564c92e8634 497 SUPERFAMILY SSF103473 17 473 8.63E-71 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_03195 4e6e2e1dd3c2c058b89b0f122be7d56b 292 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 89 107 6.5E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C4901_03195 4e6e2e1dd3c2c058b89b0f122be7d56b 292 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 12 39 6.5E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C4901_03195 4e6e2e1dd3c2c058b89b0f122be7d56b 292 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 158 186 6.5E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C4901_03195 4e6e2e1dd3c2c058b89b0f122be7d56b 292 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 107 133 6.5E-49 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C4901_03195 4e6e2e1dd3c2c058b89b0f122be7d56b 292 ProSitePatterns PS01218 TatC family signature. 158 177 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site C4901_03195 4e6e2e1dd3c2c058b89b0f122be7d56b 292 Pfam PF00902 Sec-independent protein translocase protein (TatC) 15 224 5.9E-65 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C4901_03195 4e6e2e1dd3c2c058b89b0f122be7d56b 292 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 241 16.206 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C4901_03195 4e6e2e1dd3c2c058b89b0f122be7d56b 292 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 14 230 7.1E-70 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 C4901_11985 e5e6fda6d049e247ee7ab2c62033df3d 270 SUPERFAMILY SSF52540 6 233 1.13E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11985 e5e6fda6d049e247ee7ab2c62033df3d 270 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 184 267 8.4E-31 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal C4901_11985 e5e6fda6d049e247ee7ab2c62033df3d 270 Pfam PF07728 AAA domain (dynein-related subfamily) 37 171 8.5E-33 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 C4901_11985 e5e6fda6d049e247ee7ab2c62033df3d 270 Gene3D G3DSA:3.40.50.300 20 189 4.6E-30 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 Gene3D G3DSA:3.50.30.20 2 152 4.7E-56 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 257 268 5.5E-11 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 342 355 5.5E-11 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00096 Glutamine amidotransferase superfamily signature 229 238 5.5E-11 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 Pfam PF00117 Glutamine amidotransferase class-I 190 364 1.7E-46 T 14-10-2018 IPR017926 Glutamine amidotransferase C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 368 1.6E-139 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 SMART SM01097 3 133 1.2E-84 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 371 47.764 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 257 273 6.7E-40 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 226 240 6.7E-40 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 187 201 6.7E-40 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 299 310 6.7E-40 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 274 291 6.7E-40 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00097 Anthranilate synthase component II signature 342 355 1.9E-5 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00097 Anthranilate synthase component II signature 257 268 1.9E-5 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 PRINTS PR00097 Anthranilate synthase component II signature 229 238 1.9E-5 T 14-10-2018 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 Gene3D G3DSA:3.40.50.880 153 370 2.1E-72 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 SUPERFAMILY SSF52317 173 368 9.02E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 SUPERFAMILY SSF52021 4 139 1.96E-54 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_04500 4a62e2634542484ccffc1d5886b75e83 377 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 1.5E-49 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 C4901_10280 45cf02437f1b4333f7f0a445df2ab6e6 140 SUPERFAMILY SSF81301 44 140 8.73E-14 T 14-10-2018 C4901_10280 45cf02437f1b4333f7f0a445df2ab6e6 140 Pfam PF01909 Nucleotidyltransferase domain 46 113 3.5E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 C4901_10280 45cf02437f1b4333f7f0a445df2ab6e6 140 Gene3D G3DSA:3.30.460.10 35 138 1.6E-11 T 14-10-2018 C4901_03795 2f01c7601048dcf68da34921f01dd0cd 165 Pfam PF01814 Hemerythrin HHE cation binding domain 28 149 1.3E-17 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C4901_03795 2f01c7601048dcf68da34921f01dd0cd 165 Gene3D G3DSA:1.20.120.520 13 157 7.7E-15 T 14-10-2018 C4901_14020 e18bf0464d8f317be2ace5c48a886015 37 SUPERFAMILY SSF57840 1 37 2.62E-15 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14020 e18bf0464d8f317be2ace5c48a886015 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14020 e18bf0464d8f317be2ace5c48a886015 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 2.1E-20 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14020 e18bf0464d8f317be2ace5c48a886015 37 Pfam PF00444 Ribosomal protein L36 1 37 3.7E-18 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_14020 e18bf0464d8f317be2ace5c48a886015 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 16.829 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_10960 c5fad9b70635745f3a85b4aae48963e3 324 Gene3D G3DSA:1.10.443.10 162 324 3.0E-34 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_10960 c5fad9b70635745f3a85b4aae48963e3 324 Gene3D G3DSA:1.10.150.130 53 161 2.5E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_10960 c5fad9b70635745f3a85b4aae48963e3 324 SUPERFAMILY SSF56349 59 321 7.53E-62 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_10960 c5fad9b70635745f3a85b4aae48963e3 324 Pfam PF00589 Phage integrase family 163 315 4.2E-26 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_14525 471aa8eec4af70627772bdbc7f08558e 181 SUPERFAMILY SSF50341 36 175 2.35E-25 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C4901_14525 471aa8eec4af70627772bdbc7f08558e 181 SMART SM00260 34 171 1.2E-13 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C4901_14525 471aa8eec4af70627772bdbc7f08558e 181 Pfam PF01584 CheW-like domain 39 173 5.4E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C4901_14525 471aa8eec4af70627772bdbc7f08558e 181 Gene3D G3DSA:2.40.50.180 57 141 6.9E-19 T 14-10-2018 C4901_02600 c8a1c00ed59a4bf9d26ea0b205efe49d 314 Pfam PF00146 NADH dehydrogenase 16 309 1.9E-33 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_01455 9f50b1e3c4c778a760a8eb674fa537a5 481 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 472 6.8E-184 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C4901_01455 9f50b1e3c4c778a760a8eb674fa537a5 481 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 8 472 95.469 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C4901_01455 9f50b1e3c4c778a760a8eb674fa537a5 481 ProSitePatterns PS00571 Amidases signature. 147 178 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 C4901_01455 9f50b1e3c4c778a760a8eb674fa537a5 481 Gene3D G3DSA:3.90.1300.10 1 481 2.3E-207 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C4901_01455 9f50b1e3c4c778a760a8eb674fa537a5 481 SUPERFAMILY SSF75304 2 478 9.81E-169 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C4901_01455 9f50b1e3c4c778a760a8eb674fa537a5 481 Pfam PF01425 Amidase 21 461 8.4E-165 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 C4901_16830 82d4f29550b19a409782eab7478fd13a 655 Pfam PF05170 AsmA family 16 132 1.0E-10 T 14-10-2018 IPR007844 AsmA C4901_16830 82d4f29550b19a409782eab7478fd13a 655 Pfam PF05170 AsmA family 266 533 4.3E-25 T 14-10-2018 IPR007844 AsmA C4901_02815 e447c3441f84b1bd5aa68223f2f746d1 153 Gene3D G3DSA:3.90.190.10 1 135 5.9E-28 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like C4901_02815 e447c3441f84b1bd5aa68223f2f746d1 153 SUPERFAMILY SSF52799 7 95 9.27E-8 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like C4901_02815 e447c3441f84b1bd5aa68223f2f746d1 153 Pfam PF04273 Putative phosphatase (DUF442) 7 107 9.7E-13 T 14-10-2018 IPR005939 Beta-lactamase hydrolase-like GO:0016787 C4901_13770 a4e6a8d0d3277f2d3720d7583cd299e7 214 PIRSF PIRSF000370 3 214 2.1E-66 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 C4901_13770 a4e6a8d0d3277f2d3720d7583cd299e7 214 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 211 36.225 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 C4901_13770 a4e6a8d0d3277f2d3720d7583cd299e7 214 Gene3D G3DSA:3.20.20.70 5 208 3.8E-35 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_13770 a4e6a8d0d3277f2d3720d7583cd299e7 214 Pfam PF13394 4Fe-4S single cluster domain 26 108 3.1E-12 T 14-10-2018 C4901_13770 a4e6a8d0d3277f2d3720d7583cd299e7 214 TIGRFAM TIGR04349 rSAM_QueE_gams: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 214 2.8E-107 T 14-10-2018 IPR027621 Putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE C4901_13770 a4e6a8d0d3277f2d3720d7583cd299e7 214 SUPERFAMILY SSF102114 27 142 3.53E-16 T 14-10-2018 C4901_13770 a4e6a8d0d3277f2d3720d7583cd299e7 214 Pfam PF04055 Radical SAM superfamily 28 144 1.2E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 59 87 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 58 111 1.7E-17 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 PRINTS PR01650 Bacterial translocase SecE signature 32 53 3.7E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 PRINTS PR01650 Bacterial translocase SecE signature 53 73 3.7E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 PRINTS PR01650 Bacterial translocase SecE signature 77 97 3.7E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 PRINTS PR01650 Bacterial translocase SecE signature 97 113 3.7E-18 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 58 110 1.3E-19 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 Gene3D G3DSA:1.20.5.1030 54 110 4.0E-18 T 14-10-2018 IPR038379 SecE superfamily C4901_14190 1c90a1bace63476f150d0afab3bb6b5a 114 Hamap MF_00422 Protein translocase subunit SecE [secE]. 53 110 12.682 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 C4901_01060 75888b97f7ed819c8dfa282f921cd885 571 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 85 246 8.3E-18 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like C4901_07595 48b9ecf4a5407d5f2af4e0956c3f51fb 100 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 1 88 3.8E-19 T 14-10-2018 IPR009241 Toxin HigB-like C4901_10345 64bbb26ba0381b3fceb640c1656dbdb3 279 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 8 271 52.661 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C4901_10345 64bbb26ba0381b3fceb640c1656dbdb3 279 SUPERFAMILY SSF51569 2 269 3.76E-102 T 14-10-2018 C4901_10345 64bbb26ba0381b3fceb640c1656dbdb3 279 Pfam PF00793 DAHP synthetase I family 8 266 6.8E-69 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C4901_10345 64bbb26ba0381b3fceb640c1656dbdb3 279 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 13 269 8.1E-121 T 14-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C4901_10345 64bbb26ba0381b3fceb640c1656dbdb3 279 Gene3D G3DSA:3.20.20.70 2 274 2.1E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 Gene3D G3DSA:1.20.1640.10 99 300 7.5E-11 T 14-10-2018 C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 119 279 8.8E-50 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 282 5.3E-71 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 SUPERFAMILY SSF82866 90 293 9.02E-38 T 14-10-2018 C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 Pfam PF02355 Protein export membrane protein 116 290 9.0E-65 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 Pfam PF07549 SecD/SecF GG Motif 33 57 1.3E-7 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 293 27.557 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 2.5E-31 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 PRINTS PR01755 Bacterial translocase SecF protein signature 150 164 2.5E-31 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 PRINTS PR01755 Bacterial translocase SecF protein signature 198 216 2.5E-31 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C4901_11370 0857d60d511fe0926b87923f52b9f7b8 306 PRINTS PR01755 Bacterial translocase SecF protein signature 230 245 2.5E-31 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial C4901_11820 56c5cdb798c9bd45757b5c0e28acea8b 332 TIGRFAM TIGR00552 nadE: NAD+ synthetase 169 283 2.3E-28 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 C4901_11820 56c5cdb798c9bd45757b5c0e28acea8b 332 SUPERFAMILY SSF52402 12 287 3.49E-47 T 14-10-2018 C4901_11820 56c5cdb798c9bd45757b5c0e28acea8b 332 Pfam PF02540 NAD synthase 170 305 8.0E-29 T 14-10-2018 IPR022310 NAD/GMP synthase C4901_11820 56c5cdb798c9bd45757b5c0e28acea8b 332 Pfam PF02540 NAD synthase 21 108 8.4E-15 T 14-10-2018 IPR022310 NAD/GMP synthase C4901_11820 56c5cdb798c9bd45757b5c0e28acea8b 332 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 315 44.962 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 C4901_06910 3bd2b404401a2f8ee942414f03692c71 168 SUPERFAMILY SSF102712 56 140 1.44E-5 T 14-10-2018 C4901_06910 3bd2b404401a2f8ee942414f03692c71 168 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 117 122 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site C4901_06910 3bd2b404401a2f8ee942414f03692c71 168 Gene3D G3DSA:3.40.140.10 45 168 2.4E-39 T 14-10-2018 C4901_06910 3bd2b404401a2f8ee942414f03692c71 168 Pfam PF04002 RadC-like JAB domain 48 167 7.5E-39 T 14-10-2018 IPR025657 RadC-like JAB domain C4901_06910 3bd2b404401a2f8ee942414f03692c71 168 TIGRFAM TIGR00608 radc: DNA repair protein RadC 29 168 2.2E-41 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 C4901_07650 eb6c80b500369384be741a3e3333318f 469 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_07650 eb6c80b500369384be741a3e3333318f 469 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 458 3.7E-169 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C4901_07650 eb6c80b500369384be741a3e3333318f 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 193 201 1.7E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_07650 eb6c80b500369384be741a3e3333318f 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 177 187 1.7E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_07650 eb6c80b500369384be741a3e3333318f 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 1.7E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_07650 eb6c80b500369384be741a3e3333318f 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 1.7E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_07650 eb6c80b500369384be741a3e3333318f 469 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 1.7E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 C4901_07650 eb6c80b500369384be741a3e3333318f 469 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 459 31.476 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C4901_07650 eb6c80b500369384be741a3e3333318f 469 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 303 2.8E-106 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 C4901_07650 eb6c80b500369384be741a3e3333318f 469 SUPERFAMILY SSF52374 3 294 5.9E-109 T 14-10-2018 C4901_07650 eb6c80b500369384be741a3e3333318f 469 Gene3D G3DSA:3.40.50.620 2 312 5.4E-130 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_07650 eb6c80b500369384be741a3e3333318f 469 SUPERFAMILY SSF48163 297 459 3.53E-41 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C4901_07650 eb6c80b500369384be741a3e3333318f 469 Gene3D G3DSA:1.10.10.350 361 460 2.5E-21 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 C4901_12120 17742f4d82b7976cafb4be735e5b7a90 294 Pfam PF14236 Domain of unknown function (DUF4338) 63 291 6.8E-70 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_01675 88c4d13caa652b8f78b03429c7f420ac 153 SUPERFAMILY SSF88697 1 150 9.94E-55 T 14-10-2018 IPR015947 PUA-like superfamily C4901_01675 88c4d13caa652b8f78b03429c7f420ac 153 Gene3D G3DSA:3.10.590.10 1 152 4.1E-57 T 14-10-2018 C4901_01675 88c4d13caa652b8f78b03429c7f420ac 153 Pfam PF01878 EVE domain 2 147 6.6E-49 T 14-10-2018 IPR002740 EVE domain C4901_06555 1717a300f847d1ba5b5c60e7a808a992 231 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 26 177 2.6E-18 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system C4901_14075 6aa539ff2e6f69cb2cd03c7bc2d7a125 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.882 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C4901_14075 6aa539ff2e6f69cb2cd03c7bc2d7a125 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.0E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 C4901_14075 6aa539ff2e6f69cb2cd03c7bc2d7a125 122 SMART SM01374 1 122 8.9E-81 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C4901_14075 6aa539ff2e6f69cb2cd03c7bc2d7a125 122 SUPERFAMILY SSF50193 1 122 1.13E-50 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14075 6aa539ff2e6f69cb2cd03c7bc2d7a125 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14075 6aa539ff2e6f69cb2cd03c7bc2d7a125 122 Gene3D G3DSA:2.40.150.20 1 122 4.5E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 C4901_14075 6aa539ff2e6f69cb2cd03c7bc2d7a125 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 9.9E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 C4901_10235 cac7680d8227feb2e38bfb481d060832 822 Pfam PF07715 TonB-dependent Receptor Plug Domain 111 209 4.6E-6 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C4901_10235 cac7680d8227feb2e38bfb481d060832 822 Pfam PF00593 TonB dependent receptor 370 820 5.2E-23 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C4901_10235 cac7680d8227feb2e38bfb481d060832 822 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 805 822 - T 14-10-2018 IPR010917 TonB-dependent receptor, conserved site C4901_10235 cac7680d8227feb2e38bfb481d060832 822 Gene3D G3DSA:2.170.130.10 95 226 4.0E-5 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C4901_10235 cac7680d8227feb2e38bfb481d060832 822 Gene3D G3DSA:2.40.170.20 236 822 3.0E-44 T 14-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily C4901_10235 cac7680d8227feb2e38bfb481d060832 822 SUPERFAMILY SSF56935 101 822 9.52E-62 T 14-10-2018 C4901_10120 5cad965658f8a550a9d7629aeb8e5189 472 Gene3D G3DSA:3.30.70.150 14 139 6.4E-48 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10120 5cad965658f8a550a9d7629aeb8e5189 472 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 188 196 - T 14-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10120 5cad965658f8a550a9d7629aeb8e5189 472 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 16 136 2.4E-43 T 14-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10120 5cad965658f8a550a9d7629aeb8e5189 472 SUPERFAMILY SSF54966 4 140 2.75E-55 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10120 5cad965658f8a550a9d7629aeb8e5189 472 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 146 454 5.5E-127 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10120 5cad965658f8a550a9d7629aeb8e5189 472 Gene3D G3DSA:3.20.20.110 142 472 1.6E-150 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10120 5cad965658f8a550a9d7629aeb8e5189 472 SUPERFAMILY SSF51649 141 465 5.37E-139 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10120 5cad965658f8a550a9d7629aeb8e5189 472 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 1 467 59.413 T 14-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_14955 c2c0985e8eb48bae7d027f50f605d674 559 SUPERFAMILY SSF143975 4 378 2.22E-135 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_14955 c2c0985e8eb48bae7d027f50f605d674 559 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 557 2.0E-234 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_14955 c2c0985e8eb48bae7d027f50f605d674 559 SUPERFAMILY SSF52016 380 557 4.0E-57 T 14-10-2018 C4901_14955 c2c0985e8eb48bae7d027f50f605d674 559 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 5 557 45.228 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_14955 c2c0985e8eb48bae7d027f50f605d674 559 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 123 133 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_14955 c2c0985e8eb48bae7d027f50f605d674 559 Pfam PF00920 Dehydratase family 35 554 4.2E-208 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_14955 c2c0985e8eb48bae7d027f50f605d674 559 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 C4901_14955 c2c0985e8eb48bae7d027f50f605d674 559 Gene3D G3DSA:3.50.30.80 379 528 3.3E-51 T 14-10-2018 C4901_03175 e60e14e4a80191a86ab76a3a341542ce 107 Gene3D G3DSA:1.10.287.1080 2 96 2.4E-31 T 14-10-2018 C4901_03175 e60e14e4a80191a86ab76a3a341542ce 107 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 3 89 21.756 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 C4901_03175 e60e14e4a80191a86ab76a3a341542ce 107 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 6 89 1.7E-31 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 C4901_03175 e60e14e4a80191a86ab76a3a341542ce 107 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 7 92 1.2E-16 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 C4901_03175 e60e14e4a80191a86ab76a3a341542ce 107 SUPERFAMILY SSF101386 4 93 7.48E-27 T 14-10-2018 C4901_12975 442c22aee07816c2e0ee923b432450dd 470 Pfam PF02754 Cysteine-rich domain 282 380 1.8E-8 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_03430 284b6f989b1e827b23cedef26b94e210 382 SUPERFAMILY SSF55307 204 319 2.98E-42 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 360 37.062 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 3.8E-39 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.2E-34 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal C4901_03430 284b6f989b1e827b23cedef26b94e210 382 Gene3D G3DSA:3.40.50.1440 9 317 4.0E-113 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 PRINTS PR00423 Cell division protein FtsZ signature 98 118 8.0E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 PRINTS PR00423 Cell division protein FtsZ signature 212 233 8.0E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 PRINTS PR00423 Cell division protein FtsZ signature 126 147 8.0E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 PRINTS PR00423 Cell division protein FtsZ signature 189 211 8.0E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 318 3.2E-126 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 SMART SM00865 207 325 1.0E-54 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 SUPERFAMILY SSF52490 13 208 1.1E-66 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 C4901_03430 284b6f989b1e827b23cedef26b94e210 382 SMART SM00864 13 205 1.5E-110 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 C4901_02880 91f9be177578699ae1573974ba376eba 268 SUPERFAMILY SSF56317 3 266 1.28E-78 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C4901_02880 91f9be177578699ae1573974ba376eba 268 Pfam PF00795 Carbon-nitrogen hydrolase 3 258 6.0E-50 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C4901_02880 91f9be177578699ae1573974ba376eba 268 Gene3D G3DSA:3.60.110.10 2 268 4.2E-91 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C4901_02880 91f9be177578699ae1573974ba376eba 268 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 151 171 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site C4901_16500 9c3a880c883b64663c91cbbbd1f67591 124 SUPERFAMILY SSF47090 66 122 4.08E-15 T 14-10-2018 IPR036365 PGBD-like superfamily C4901_16500 9c3a880c883b64663c91cbbbd1f67591 124 Gene3D G3DSA:1.10.101.10 50 124 6.5E-14 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 C4901_16500 9c3a880c883b64663c91cbbbd1f67591 124 Pfam PF01471 Putative peptidoglycan binding domain 70 122 1.9E-13 T 14-10-2018 IPR002477 Peptidoglycan binding-like C4901_03290 dfb75ee1a1582fb4eacd279696621f28 104 SUPERFAMILY SSF46626 13 104 1.3E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_03290 dfb75ee1a1582fb4eacd279696621f28 104 Gene3D G3DSA:1.10.760.10 10 104 1.9E-26 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_03290 dfb75ee1a1582fb4eacd279696621f28 104 Pfam PF00034 Cytochrome c 18 104 1.5E-8 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_04100 d8803304fd12deb41faab565405a42c6 228 SMART SM00382 39 160 0.005 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_04100 d8803304fd12deb41faab565405a42c6 228 Gene3D G3DSA:1.10.8.60 161 226 2.0E-21 T 14-10-2018 C4901_04100 d8803304fd12deb41faab565405a42c6 228 Gene3D G3DSA:3.40.50.300 1 157 2.6E-27 T 14-10-2018 C4901_04100 d8803304fd12deb41faab565405a42c6 228 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 4 226 2.4E-59 T 14-10-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 C4901_04100 d8803304fd12deb41faab565405a42c6 228 SUPERFAMILY SSF52540 16 205 8.59E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04100 d8803304fd12deb41faab565405a42c6 228 Pfam PF00308 Bacterial dnaA protein 15 65 3.9E-6 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA C4901_04100 d8803304fd12deb41faab565405a42c6 228 Pfam PF00308 Bacterial dnaA protein 96 196 2.6E-6 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA C4901_15520 fdf2659e36b17f2aea5cb68c4096067c 105 Gene3D G3DSA:3.30.950.10 12 78 3.5E-9 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 C4901_15520 fdf2659e36b17f2aea5cb68c4096067c 105 SUPERFAMILY SSF53790 14 81 5.89E-6 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 C4901_04235 9a0d7aac5f78b1c929d5b1f5eccb3de5 314 Pfam PF13007 Transposase C of IS166 homeodomain 3 57 1.5E-5 T 14-10-2018 IPR024463 Transposase TnpC, homeodomain C4901_04235 9a0d7aac5f78b1c929d5b1f5eccb3de5 314 Pfam PF03050 Transposase IS66 family 150 205 1.2E-7 T 14-10-2018 IPR004291 Transposase, IS66 C4901_03760 48084c5cf11f8e9bded063f1751aba9a 200 SUPERFAMILY SSF52172 77 199 3.13E-26 T 14-10-2018 IPR011006 CheY-like superfamily C4901_03760 48084c5cf11f8e9bded063f1751aba9a 200 Pfam PF00072 Response regulator receiver domain 79 194 3.8E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_03760 48084c5cf11f8e9bded063f1751aba9a 200 SMART SM00448 77 194 3.9E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_03760 48084c5cf11f8e9bded063f1751aba9a 200 Gene3D G3DSA:3.40.50.2300 76 200 1.6E-27 T 14-10-2018 C4901_11430 e4c957d778e19886f017765e549325f5 147 Pfam PF00589 Phage integrase family 6 139 3.7E-22 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_11430 e4c957d778e19886f017765e549325f5 147 SUPERFAMILY SSF56349 5 144 5.59E-38 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_11430 e4c957d778e19886f017765e549325f5 147 Gene3D G3DSA:1.10.443.10 1 147 4.2E-31 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_15505 e4f536ae0798360ec4a013bb73c2657c 212 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 188 3.2E-7 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_15505 e4f536ae0798360ec4a013bb73c2657c 212 Gene3D G3DSA:3.40.30.10 1 145 1.7E-47 T 14-10-2018 C4901_15505 e4f536ae0798360ec4a013bb73c2657c 212 SUPERFAMILY SSF52833 3 208 1.2E-62 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_15505 e4f536ae0798360ec4a013bb73c2657c 212 Pfam PF00578 AhpC/TSA family 5 135 5.0E-28 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_15505 e4f536ae0798360ec4a013bb73c2657c 212 PIRSF PIRSF000239 1 209 1.8E-74 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_15505 e4f536ae0798360ec4a013bb73c2657c 212 Gene3D G3DSA:3.30.1020.10 146 210 3.6E-23 T 14-10-2018 C4901_03610 1c013f63245c3812dbb82c19fe3cbe9c 98 TIGRFAM TIGR04535 ferrit_encaps: ferritin-like protein 7 96 1.4E-39 T 14-10-2018 IPR030907 Ferritin-like protein C4901_03610 1c013f63245c3812dbb82c19fe3cbe9c 98 SUPERFAMILY SSF47240 6 92 1.42E-21 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_08180 80d8974f061d972e31d09f91387678f8 346 Pfam PF14236 Domain of unknown function (DUF4338) 10 171 3.3E-35 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_08180 80d8974f061d972e31d09f91387678f8 346 Pfam PF13808 DDE_Tnp_1-associated 200 294 1.1E-18 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 PIRSF PIRSF006337 18 606 2.4E-221 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 Gene3D G3DSA:1.10.10.760 459 503 7.4E-176 T 14-10-2018 C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 SMART SM00642 108 517 3.7E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 21 82 9.5E-10 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 SUPERFAMILY SSF81296 21 107 1.29E-20 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 Gene3D G3DSA:3.20.20.80 117 531 7.4E-176 T 14-10-2018 C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 SUPERFAMILY SSF51445 104 532 4.78E-107 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 Pfam PF11941 Domain of unknown function (DUF3459) 522 611 2.8E-13 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 Gene3D G3DSA:2.60.40.10 2 107 6.8E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 30 579 6.8E-211 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 C4901_06060 994892bb8dd828fcbe1b5ce6626abb94 625 Pfam PF00128 Alpha amylase, catalytic domain 139 223 2.3E-10 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 C4901_12025 75d7a061885c149319e54cdcad047fcf 332 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 327 2.2E-128 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 C4901_12025 75d7a061885c149319e54cdcad047fcf 332 Gene3D G3DSA:3.90.25.10 166 309 5.1E-119 T 14-10-2018 C4901_12025 75d7a061885c149319e54cdcad047fcf 332 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 328 49.183 T 14-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 C4901_12025 75d7a061885c149319e54cdcad047fcf 332 Gene3D G3DSA:3.40.50.720 3 321 5.1E-119 T 14-10-2018 C4901_12025 75d7a061885c149319e54cdcad047fcf 332 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 240 8.8E-43 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C4901_12025 75d7a061885c149319e54cdcad047fcf 332 SUPERFAMILY SSF51735 1 325 6.37E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_13615 d5af650d3ac82246124bd6e67ed049cc 152 Pfam PF05717 IS66 Orf2 like protein 17 108 2.8E-25 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_07925 dbe63cc9dea5c59f2fc04c095531541a 187 Gene3D G3DSA:2.60.40.2470 66 187 2.3E-32 T 14-10-2018 IPR038162 Ig-like SoxY domain superfamily C4901_07925 dbe63cc9dea5c59f2fc04c095531541a 187 PIRSF PIRSF010312 29 187 9.0E-32 T 14-10-2018 IPR016568 Sulphur oxidation, SoxY C4901_07925 dbe63cc9dea5c59f2fc04c095531541a 187 Pfam PF13501 Sulfur oxidation protein SoxY 84 185 3.1E-24 T 14-10-2018 IPR032711 Ig-like SoxY domain C4901_14505 4c1ff7c07bab700632b676ebabc0c759 155 SMART SM00260 5 143 0.007 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C4901_14505 4c1ff7c07bab700632b676ebabc0c759 155 Pfam PF01584 CheW-like domain 10 79 1.1E-9 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 C4901_14505 4c1ff7c07bab700632b676ebabc0c759 155 SUPERFAMILY SSF50341 6 140 2.75E-13 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 C4901_14505 4c1ff7c07bab700632b676ebabc0c759 155 Gene3D G3DSA:2.40.50.180 29 120 5.7E-7 T 14-10-2018 C4901_15670 9ac168eb8434bf5d1c51a19703f7d84c 166 Pfam PF00929 Exonuclease 6 155 2.1E-13 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C4901_15670 9ac168eb8434bf5d1c51a19703f7d84c 166 SUPERFAMILY SSF53098 4 161 1.81E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_15670 9ac168eb8434bf5d1c51a19703f7d84c 166 SMART SM00479 3 165 7.9E-12 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III C4901_15670 9ac168eb8434bf5d1c51a19703f7d84c 166 Gene3D G3DSA:3.30.420.10 2 163 3.8E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_05395 25511815f33236c3e8f6a216b7becd14 284 TIGRFAM TIGR03473 HpnK: hopanoid biosynthesis associated protein HpnK 6 283 2.6E-114 T 14-10-2018 IPR017836 Hopanoid biosynthesis associated protein HpnK C4901_05395 25511815f33236c3e8f6a216b7becd14 284 Gene3D G3DSA:3.20.20.370 3 284 2.2E-52 T 14-10-2018 C4901_05395 25511815f33236c3e8f6a216b7becd14 284 SUPERFAMILY SSF88713 6 283 3.78E-66 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 C4901_05395 25511815f33236c3e8f6a216b7becd14 284 Pfam PF04794 YdjC-like protein 7 272 1.9E-55 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like C4901_06580 f4466c5da81bcc46512d266f4f042908 155 Pfam PF13657 HipA N-terminal domain 13 83 2.9E-10 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 C4901_06580 f4466c5da81bcc46512d266f4f042908 155 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 20 83 2.4E-11 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 Gene3D G3DSA:1.20.120.640 306 455 2.7E-42 T 14-10-2018 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 SUPERFAMILY SSF52374 1 310 3.1E-94 T 14-10-2018 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 2.1E-123 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 Gene3D G3DSA:3.40.50.620 1 305 1.5E-128 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.9E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 1.9E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 1.9E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.9E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 456 37.935 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 SUPERFAMILY SSF47323 316 455 6.02E-34 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 455 6.5E-163 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 SMART SM00840 340 402 2.4E-21 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 C4901_12750 50f6cce63d33ed6b73318da0b06c0b8b 456 Pfam PF09190 DALR domain 340 402 2.8E-17 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 430 751 7.4E-156 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 SUPERFAMILY SSF51726 395 756 5.62E-121 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 SUPERFAMILY SSF51726 3 393 3.35E-113 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 4 312 1.5E-119 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 2 757 37.296 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 7 756 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 PIRSF PIRSF000382 2 761 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 Gene3D G3DSA:3.20.20.210 6 523 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C4901_16605 2b768d43d91a43c624934a9cdd9bf28e 762 Gene3D G3DSA:3.20.20.210 388 755 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 C4901_15035 bde401237bddb6a86895cf81c49db75b 552 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 82 124 1.2E-8 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_15035 bde401237bddb6a86895cf81c49db75b 552 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 230 251 3.4E-27 T 14-10-2018 C4901_15035 bde401237bddb6a86895cf81c49db75b 552 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 252 278 3.4E-27 T 14-10-2018 C4901_15035 bde401237bddb6a86895cf81c49db75b 552 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 115 135 3.4E-27 T 14-10-2018 C4901_15035 bde401237bddb6a86895cf81c49db75b 552 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 162 183 3.4E-27 T 14-10-2018 C4901_15035 bde401237bddb6a86895cf81c49db75b 552 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 319 331 3.4E-27 T 14-10-2018 C4901_15035 bde401237bddb6a86895cf81c49db75b 552 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 87 112 3.4E-27 T 14-10-2018 C4901_15035 bde401237bddb6a86895cf81c49db75b 552 Pfam PF00361 Proton-conducting membrane transporter 138 420 1.1E-37 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 SMART SM00859 3 142 4.3E-56 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 142 4.2E-35 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 SUPERFAMILY SSF51735 2 174 4.65E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 338 42.865 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 Gene3D G3DSA:3.30.360.10 148 312 7.4E-127 T 14-10-2018 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 145 161 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 344 6.3E-129 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 Gene3D G3DSA:3.40.50.720 3 330 7.4E-127 T 14-10-2018 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 161 315 8.4E-20 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 C4901_14310 eec847917a19f0b3614bf649a9f434ed 344 SUPERFAMILY SSF55347 150 312 3.01E-52 T 14-10-2018 C4901_06440 936a06ccb332d8b98c04980658c4772e 215 Gene3D G3DSA:3.30.1360.120 106 180 2.4E-10 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 C4901_06440 936a06ccb332d8b98c04980658c4772e 215 Gene3D G3DSA:3.30.70.1520 45 105 2.4E-10 T 14-10-2018 C4901_07945 3c18c5c6ff36caa3b6737f00b7ad36e4 127 PIRSF PIRSF027377 2 122 4.0E-50 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C4901_07945 3c18c5c6ff36caa3b6737f00b7ad36e4 127 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 127 47.757 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C4901_07945 3c18c5c6ff36caa3b6737f00b7ad36e4 127 Gene3D G3DSA:3.30.1130.10 3 124 4.3E-43 T 14-10-2018 C4901_07945 3c18c5c6ff36caa3b6737f00b7ad36e4 127 Pfam PF14489 QueF-like protein 40 118 6.5E-30 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C4901_07945 3c18c5c6ff36caa3b6737f00b7ad36e4 127 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 8 116 1.9E-50 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 C4901_07945 3c18c5c6ff36caa3b6737f00b7ad36e4 127 SUPERFAMILY SSF55620 4 112 3.63E-25 T 14-10-2018 C4901_09455 c3e095afbc4692bd972fc60fc4b4db9d 358 PIRSF PIRSF038945 2 353 2.1E-152 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 C4901_09455 c3e095afbc4692bd972fc60fc4b4db9d 358 Gene3D G3DSA:3.40.50.1100 64 160 8.8E-120 T 14-10-2018 C4901_09455 c3e095afbc4692bd972fc60fc4b4db9d 358 SUPERFAMILY SSF53686 7 355 4.71E-102 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme C4901_09455 c3e095afbc4692bd972fc60fc4b4db9d 358 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 56 69 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 C4901_09455 c3e095afbc4692bd972fc60fc4b4db9d 358 Gene3D G3DSA:3.40.50.1100 12 327 8.8E-120 T 14-10-2018 C4901_09455 c3e095afbc4692bd972fc60fc4b4db9d 358 TIGRFAM TIGR00260 thrC: threonine synthase 10 328 7.9E-89 T 14-10-2018 IPR004450 Threonine synthase-like C4901_09455 c3e095afbc4692bd972fc60fc4b4db9d 358 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 26 321 5.4E-70 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme C4901_12185 4de77e64e20da8ed605da43bd9826b2c 316 Pfam PF03824 High-affinity nickel-transport protein 28 305 1.5E-56 T 14-10-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 C4901_04115 fd9230542dda3da31aea0565313acb62 271 Gene3D G3DSA:3.40.190.80 155 261 1.3E-9 T 14-10-2018 C4901_04115 fd9230542dda3da31aea0565313acb62 271 SUPERFAMILY SSF56655 15 261 1.13E-50 T 14-10-2018 C4901_04115 fd9230542dda3da31aea0565313acb62 271 Pfam PF00459 Inositol monophosphatase family 17 240 1.1E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_04115 fd9230542dda3da31aea0565313acb62 271 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 218 232 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 C4901_04115 fd9230542dda3da31aea0565313acb62 271 Gene3D G3DSA:3.30.540.10 7 150 1.0E-32 T 14-10-2018 C4901_04115 fd9230542dda3da31aea0565313acb62 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 91 107 1.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_04115 fd9230542dda3da31aea0565313acb62 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 140 163 1.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_04115 fd9230542dda3da31aea0565313acb62 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 215 239 1.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_04115 fd9230542dda3da31aea0565313acb62 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 71 87 1.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_04115 fd9230542dda3da31aea0565313acb62 271 PRINTS PR00377 Inositol monophosphatase superfamily signature 49 69 1.4E-18 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 C4901_04115 fd9230542dda3da31aea0565313acb62 271 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 91 104 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site C4901_17035 63efd2b0f587b4f44934e9048f2c584c 104 Gene3D G3DSA:1.25.40.10 20 100 1.7E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_17035 63efd2b0f587b4f44934e9048f2c584c 104 SUPERFAMILY SSF81901 25 69 8.76E-6 T 14-10-2018 C4901_00670 540a5255b8ddea7527416de19d7e9bae 260 Gene3D G3DSA:3.40.1190.20 1 256 2.7E-67 T 14-10-2018 IPR029056 Ribokinase-like C4901_00670 540a5255b8ddea7527416de19d7e9bae 260 SUPERFAMILY SSF53613 1 252 1.46E-58 T 14-10-2018 IPR029056 Ribokinase-like C4901_00670 540a5255b8ddea7527416de19d7e9bae 260 Pfam PF08543 Phosphomethylpyrimidine kinase 7 243 7.5E-64 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 C4901_15375 131559084d58f2aa0cd21fa5f9f4176a 130 Pfam PF01402 Ribbon-helix-helix protein, copG family 5 38 7.1E-5 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 C4901_09485 59a9cda361197b658d7c700adf38730d 210 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 7 204 1.2E-60 T 14-10-2018 C4901_09485 59a9cda361197b658d7c700adf38730d 210 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 132 147 - T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 C4901_09485 59a9cda361197b658d7c700adf38730d 210 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 3 205 2.2E-64 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 C4901_09485 59a9cda361197b658d7c700adf38730d 210 Gene3D G3DSA:3.40.50.150 1 208 4.1E-76 T 14-10-2018 C4901_09485 59a9cda361197b658d7c700adf38730d 210 SUPERFAMILY SSF53335 5 205 7.37E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_09485 59a9cda361197b658d7c700adf38730d 210 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 2 210 37.476 T 14-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 C4901_08910 7b89cd7eb1a5bbabc5dffe412f756c7f 417 Gene3D G3DSA:1.20.1250.20 227 411 2.2E-17 T 14-10-2018 C4901_08910 7b89cd7eb1a5bbabc5dffe412f756c7f 417 Pfam PF07690 Major Facilitator Superfamily 29 323 5.4E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_08910 7b89cd7eb1a5bbabc5dffe412f756c7f 417 Gene3D G3DSA:1.20.1250.20 22 226 4.5E-16 T 14-10-2018 C4901_08910 7b89cd7eb1a5bbabc5dffe412f756c7f 417 SUPERFAMILY SSF103473 17 408 1.57E-40 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_08590 3f7e2374ebfc6bf07c037e4e42796c0f 266 Gene3D G3DSA:1.20.1290.10 3 125 2.5E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C4901_08590 3f7e2374ebfc6bf07c037e4e42796c0f 266 Gene3D G3DSA:1.20.1290.10 126 263 4.3E-35 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C4901_08590 3f7e2374ebfc6bf07c037e4e42796c0f 266 SUPERFAMILY SSF69118 3 263 5.92E-65 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C4901_08590 3f7e2374ebfc6bf07c037e4e42796c0f 266 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 117 3.3E-16 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C4901_08590 3f7e2374ebfc6bf07c037e4e42796c0f 266 Pfam PF02627 Carboxymuconolactone decarboxylase family 172 256 3.0E-19 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 C4901_00865 d0b7e12bf46b77c3a1a472d5bf24cac6 114 SMART SM00418 26 105 8.2E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_00865 d0b7e12bf46b77c3a1a472d5bf24cac6 114 SUPERFAMILY SSF46785 15 104 1.37E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_00865 d0b7e12bf46b77c3a1a472d5bf24cac6 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 1.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_00865 d0b7e12bf46b77c3a1a472d5bf24cac6 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 43 1.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_00865 d0b7e12bf46b77c3a1a472d5bf24cac6 114 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 1.4E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_00865 d0b7e12bf46b77c3a1a472d5bf24cac6 114 Pfam PF01022 Bacterial regulatory protein, arsR family 33 78 2.2E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_00865 d0b7e12bf46b77c3a1a472d5bf24cac6 114 Gene3D G3DSA:1.10.10.10 5 106 1.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_08850 09f17b74351685a47f0af1f2eb4c3639 447 Gene3D G3DSA:3.60.120.10 2 444 1.7E-123 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C4901_08850 09f17b74351685a47f0af1f2eb4c3639 447 Pfam PF00425 chorismate binding enzyme 179 433 5.0E-86 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal C4901_08850 09f17b74351685a47f0af1f2eb4c3639 447 SUPERFAMILY SSF56322 77 442 6.28E-110 T 14-10-2018 IPR005801 ADC synthase GO:0009058 C4901_08850 09f17b74351685a47f0af1f2eb4c3639 447 PRINTS PR00095 Anthranilate synthase component I signature 281 294 1.2E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_08850 09f17b74351685a47f0af1f2eb4c3639 447 PRINTS PR00095 Anthranilate synthase component I signature 390 404 1.2E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_08850 09f17b74351685a47f0af1f2eb4c3639 447 PRINTS PR00095 Anthranilate synthase component I signature 295 308 1.2E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_08850 09f17b74351685a47f0af1f2eb4c3639 447 PRINTS PR00095 Anthranilate synthase component I signature 375 389 1.2E-19 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 SMART SM00028 183 216 34.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 SMART SM00028 72 105 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 SMART SM00028 38 71 75.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 SMART SM00028 217 250 9.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 SMART SM00028 110 143 31.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 Gene3D G3DSA:1.25.40.10 176 315 1.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 9 389 36.41 T 14-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 Gene3D G3DSA:1.25.40.10 22 102 7.3E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 SUPERFAMILY SSF81901 42 285 1.96E-17 T 14-10-2018 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 Gene3D G3DSA:1.25.40.10 103 172 5.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 Pfam PF13432 Tetratricopeptide repeat 188 240 2.9E-8 T 14-10-2018 C4901_12040 337ecb565bd824fb3493a84618d7f62c 391 Pfam PF13432 Tetratricopeptide repeat 76 137 0.0045 T 14-10-2018 C4901_00145 5d0fd56a7578a24139b0c1a96819db65 333 Pfam PF01610 Transposase 68 309 9.9E-61 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_00145 5d0fd56a7578a24139b0c1a96819db65 333 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 3 52 6.2E-10 T 14-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain C4901_12335 e731ab0ab2601bfab69694e6d0b30dd5 153 Pfam PF10116 Protein required for attachment to host cells 5 144 1.1E-36 T 14-10-2018 IPR019291 Host attachment protein C4901_10065 979d3ed0cb1c08659e1385c2a627c3da 207 Gene3D G3DSA:3.40.50.300 6 207 2.0E-41 T 14-10-2018 C4901_10065 979d3ed0cb1c08659e1385c2a627c3da 207 SUPERFAMILY SSF52540 4 207 2.4E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10065 979d3ed0cb1c08659e1385c2a627c3da 207 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 181 1.1E-10 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C4901_10065 979d3ed0cb1c08659e1385c2a627c3da 207 PIRSF PIRSF009320 3 207 3.6E-32 T 14-10-2018 C4901_14655 88bcc671f14d8592311c8124f99396fd 217 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 217 29.357 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14655 88bcc671f14d8592311c8124f99396fd 217 Pfam PF00156 Phosphoribosyl transferase domain 44 159 2.9E-13 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C4901_14655 88bcc671f14d8592311c8124f99396fd 217 Gene3D G3DSA:3.40.50.2020 1 213 3.5E-64 T 14-10-2018 C4901_14655 88bcc671f14d8592311c8124f99396fd 217 SUPERFAMILY SSF53271 1 209 1.23E-42 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C4901_14655 88bcc671f14d8592311c8124f99396fd 217 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 11 182 3.3E-52 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_07070 d6007aad87df396c99b87097b3483da6 201 SUPERFAMILY SSF89069 10 76 6.28E-11 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 C4901_07070 d6007aad87df396c99b87097b3483da6 201 Gene3D G3DSA:1.10.10.880 10 77 1.4E-14 T 14-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 C4901_07070 d6007aad87df396c99b87097b3483da6 201 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 11 83 2.9E-13 T 14-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 C4901_08700 df3d6b852450b45b0b26cd379ca749ae 133 Gene3D G3DSA:3.30.70.60 1 91 1.3E-30 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 C4901_08700 df3d6b852450b45b0b26cd379ca749ae 133 SUPERFAMILY SSF54995 1 102 5.76E-36 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08700 df3d6b852450b45b0b26cd379ca749ae 133 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.427 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 C4901_08700 df3d6b852450b45b0b26cd379ca749ae 133 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 C4901_08700 df3d6b852450b45b0b26cd379ca749ae 133 Pfam PF01250 Ribosomal protein S6 3 90 4.9E-26 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_08700 df3d6b852450b45b0b26cd379ca749ae 133 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 1.5E-31 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 7 157 6.1E-56 T 14-10-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 SUPERFAMILY SSF53163 7 163 1.36E-44 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily C4901_12245 5a759eb8807e404aba81c17161064c1c 192 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 8 152 2.6E-44 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 Pfam PF01750 Hydrogenase maturation protease 24 152 4.6E-36 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 PRINTS PR00446 Hydrogen uptake protein signature 60 70 3.1E-30 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 PRINTS PR00446 Hydrogen uptake protein signature 7 19 3.1E-30 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 PRINTS PR00446 Hydrogen uptake protein signature 71 87 3.1E-30 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 PRINTS PR00446 Hydrogen uptake protein signature 19 30 3.1E-30 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 PRINTS PR00446 Hydrogen uptake protein signature 39 56 3.1E-30 T 14-10-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 C4901_12245 5a759eb8807e404aba81c17161064c1c 192 Gene3D G3DSA:3.40.50.1450 6 166 2.6E-40 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 71 4.4E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 Gene3D G3DSA:1.10.1140.10 343 458 1.5E-58 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 458 56.92 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 SUPERFAMILY SSF47917 343 457 5.49E-53 T 14-10-2018 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 458 5.0E-252 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 331 340 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 SUPERFAMILY SSF52540 75 345 6.96E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 SMART SM00382 140 379 7.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 SUPERFAMILY SSF50615 2 73 8.11E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 Gene3D G3DSA:2.40.10.170 1 73 5.4E-30 T 14-10-2018 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 128 340 1.8E-64 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_16995 3fea3eed28d1cccc0e50c9c3db8bd07a 458 Gene3D G3DSA:3.40.50.300 74 342 2.2E-110 T 14-10-2018 C4901_16660 b24b511e486ecb948bb83e4ece9e6dcf 143 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 135 10.905 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_16660 b24b511e486ecb948bb83e4ece9e6dcf 143 SUPERFAMILY SSF88723 4 137 1.63E-19 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_16660 b24b511e486ecb948bb83e4ece9e6dcf 143 Gene3D G3DSA:3.40.50.1010 2 131 1.2E-30 T 14-10-2018 C4901_16660 b24b511e486ecb948bb83e4ece9e6dcf 143 Pfam PF01850 PIN domain 6 127 1.9E-10 T 14-10-2018 IPR002716 PIN domain C4901_06130 b989f8c88c9578d0745c75a89b93ed06 184 Pfam PF00510 Cytochrome c oxidase subunit III 56 178 3.5E-8 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06130 b989f8c88c9578d0745c75a89b93ed06 184 SUPERFAMILY SSF81452 37 178 1.96E-31 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06130 b989f8c88c9578d0745c75a89b93ed06 184 Gene3D G3DSA:1.20.120.80 29 183 1.0E-28 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_01345 fc5b4404d3c0f231655ee73518d5bf95 398 Gene3D G3DSA:3.20.20.70 17 389 2.9E-50 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_01345 fc5b4404d3c0f231655ee73518d5bf95 398 Pfam PF03060 Nitronate monooxygenase 21 381 6.6E-34 T 14-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 C4901_01345 fc5b4404d3c0f231655ee73518d5bf95 398 SUPERFAMILY SSF51412 20 307 1.98E-32 T 14-10-2018 C4901_10055 6950361381f041d6cdd05813d83ff7e3 784 Pfam PF13519 von Willebrand factor type A domain 592 710 7.1E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A C4901_10055 6950361381f041d6cdd05813d83ff7e3 784 SMART SM00327 589 783 3.2E-14 T 14-10-2018 IPR002035 von Willebrand factor, type A C4901_10055 6950361381f041d6cdd05813d83ff7e3 784 Gene3D G3DSA:3.40.50.410 584 769 2.1E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_10055 6950361381f041d6cdd05813d83ff7e3 784 SUPERFAMILY SSF53300 590 778 3.18E-22 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_13670 0868c14fa52259a293e8574afcdba3c3 115 Pfam PF05717 IS66 Orf2 like protein 38 111 2.3E-24 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_08280 6fc13e5145549bff6da33fa36f6b50bb 359 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 85 357 1.2E-34 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C4901_08280 6fc13e5145549bff6da33fa36f6b50bb 359 Gene3D G3DSA:1.10.287.470 108 168 3.0E-37 T 14-10-2018 C4901_08280 6fc13e5145549bff6da33fa36f6b50bb 359 Gene3D G3DSA:2.40.30.170 60 283 3.0E-37 T 14-10-2018 C4901_08280 6fc13e5145549bff6da33fa36f6b50bb 359 SUPERFAMILY SSF111369 85 276 6.54E-7 T 14-10-2018 C4901_08280 6fc13e5145549bff6da33fa36f6b50bb 359 Gene3D G3DSA:2.40.420.20 48 331 3.0E-37 T 14-10-2018 C4901_08280 6fc13e5145549bff6da33fa36f6b50bb 359 Gene3D G3DSA:2.40.50.100 74 203 3.0E-37 T 14-10-2018 C4901_08280 6fc13e5145549bff6da33fa36f6b50bb 359 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 270 2.0E-14 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain C4901_12670 7026f7a4c2d1a6b2b709ca3a89daf1d7 327 SMART SM00829 10 323 1.3E-49 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 C4901_12670 7026f7a4c2d1a6b2b709ca3a89daf1d7 327 Gene3D G3DSA:3.40.50.720 120 262 6.2E-105 T 14-10-2018 C4901_12670 7026f7a4c2d1a6b2b709ca3a89daf1d7 327 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 324 1.7E-130 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 C4901_12670 7026f7a4c2d1a6b2b709ca3a89daf1d7 327 Pfam PF00107 Zinc-binding dehydrogenase 151 266 2.1E-28 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 C4901_12670 7026f7a4c2d1a6b2b709ca3a89daf1d7 327 SUPERFAMILY SSF51735 112 286 1.67E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_12670 7026f7a4c2d1a6b2b709ca3a89daf1d7 327 SUPERFAMILY SSF50129 1 139 7.46E-35 T 14-10-2018 IPR011032 GroES-like superfamily C4901_12670 7026f7a4c2d1a6b2b709ca3a89daf1d7 327 Gene3D G3DSA:3.90.180.10 13 323 6.2E-105 T 14-10-2018 C4901_12670 7026f7a4c2d1a6b2b709ca3a89daf1d7 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 100 8.4E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 C4901_02245 aabbf42333a805acb96cf6a4c3bc689a 187 Pfam PF00857 Isochorismatase family 10 177 1.6E-38 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 C4901_02245 aabbf42333a805acb96cf6a4c3bc689a 187 Gene3D G3DSA:3.40.50.850 1 183 8.2E-45 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C4901_02245 aabbf42333a805acb96cf6a4c3bc689a 187 SUPERFAMILY SSF52499 8 184 8.24E-47 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C4901_03675 7b53c3343f90df334a0026240a8bfe0f 279 Pfam PF01610 Transposase 36 255 5.0E-56 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_06200 fa786cb925ec264edbcfbf9cc790f880 173 Pfam PF07295 Zinc-ribbon containing domain 36 165 2.8E-36 T 14-10-2018 IPR009912 Zinc-ribbon containing domain C4901_08600 31997389db408c9d5ce66d2572cccc85 167 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 53 163 3.7E-24 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08600 31997389db408c9d5ce66d2572cccc85 167 SUPERFAMILY SSF56770 42 165 4.45E-43 T 14-10-2018 C4901_08600 31997389db408c9d5ce66d2572cccc85 167 Gene3D G3DSA:3.40.50.12280 25 167 2.8E-42 T 14-10-2018 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 17 283 1.2E-112 T 14-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 Gene3D G3DSA:1.20.120.1810 14 124 4.2E-26 T 14-10-2018 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 50 280 1.6E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 Pfam PF04542 Sigma-70 region 2 59 124 7.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 253 279 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 SUPERFAMILY SSF88946 15 124 4.45E-35 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 Pfam PF04545 Sigma-70, region 4 230 280 1.9E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 PRINTS PR00046 Major sigma-70 factor signature 268 279 8.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 PRINTS PR00046 Major sigma-70 factor signature 253 268 8.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 PRINTS PR00046 Major sigma-70 factor signature 234 246 8.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 PRINTS PR00046 Major sigma-70 factor signature 79 92 8.5E-18 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 Gene3D G3DSA:1.10.10.10 215 282 6.0E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_01885 45eece5c1d9ab9453be14758e7109228 289 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 79 92 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 C4901_01885 45eece5c1d9ab9453be14758e7109228 289 SUPERFAMILY SSF88659 207 283 1.55E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_08995 9487900b67f0778cb27d1f3bc5ddb920 128 Pfam PF02656 Domain of unknown function (DUF202) 7 86 2.6E-17 T 14-10-2018 IPR003807 Domain of unknown function DUF202 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 95 27.927 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 SUPERFAMILY SSF50129 1 94 9.42E-36 T 14-10-2018 IPR011032 GroES-like superfamily C4901_00570 be5c63aabe3027abe489121661f1e92f 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 94 1.1E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 SMART SM00883 2 94 1.5E-58 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 PRINTS PR00297 10kDa chaperonin signature 60 72 2.9E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 PRINTS PR00297 10kDa chaperonin signature 25 46 2.9E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 PRINTS PR00297 10kDa chaperonin signature 3 18 2.9E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 PRINTS PR00297 10kDa chaperonin signature 81 94 2.9E-34 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 C4901_00570 be5c63aabe3027abe489121661f1e92f 97 Gene3D G3DSA:2.30.33.40 1 97 6.2E-38 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 C4901_03800 f3ab5a33189eb3f93e14c81a6f3fbb8a 82 SUPERFAMILY SSF52833 3 75 6.42E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_03800 f3ab5a33189eb3f93e14c81a6f3fbb8a 82 Gene3D G3DSA:3.40.30.10 1 81 4.8E-12 T 14-10-2018 C4901_03800 f3ab5a33189eb3f93e14c81a6f3fbb8a 82 Pfam PF13192 Thioredoxin domain 1 73 2.3E-11 T 14-10-2018 IPR012336 Thioredoxin-like fold C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 Pfam PF00303 Thymidylate synthase 3 264 1.7E-122 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 SUPERFAMILY SSF55831 1 264 4.84E-128 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.176 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 5.4E-49 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 5.4E-49 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 5.4E-49 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 5.4E-49 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 5.4E-49 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 Gene3D G3DSA:3.30.572.10 1 264 6.6E-130 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 85 264 3.9E-96 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_08470 e7e950a68a5c01e61cc32039cee93bd2 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 3 84 1.8E-41 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 C4901_15735 b0ff889f7fc574d71e1500898bbf99b9 221 Pfam PF13384 Homeodomain-like domain 107 138 1.0E-6 T 14-10-2018 C4901_15735 b0ff889f7fc574d71e1500898bbf99b9 221 Gene3D G3DSA:1.10.10.60 95 133 9.1E-7 T 14-10-2018 C4901_15735 b0ff889f7fc574d71e1500898bbf99b9 221 SUPERFAMILY SSF46689 98 185 5.82E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_10810 fdcf51a4a5fcd75872b1f2c0396ff226 360 SMART SM00530 23 84 1.6E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_10810 fdcf51a4a5fcd75872b1f2c0396ff226 360 Gene3D G3DSA:1.10.260.40 12 93 5.8E-25 T 14-10-2018 C4901_10810 fdcf51a4a5fcd75872b1f2c0396ff226 360 SUPERFAMILY SSF47413 19 84 1.49E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_10810 fdcf51a4a5fcd75872b1f2c0396ff226 360 Pfam PF13413 Helix-turn-helix domain 23 84 7.0E-25 T 14-10-2018 C4901_10810 fdcf51a4a5fcd75872b1f2c0396ff226 360 Pfam PF13464 Domain of unknown function (DUF4115) 291 358 3.2E-7 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 C4901_05680 8d256f20d83cb1bb086132e1e3bccdea 73 SUPERFAMILY SSF53098 1 70 1.88E-16 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_05680 8d256f20d83cb1bb086132e1e3bccdea 73 Pfam PF13683 Integrase core domain 9 61 6.8E-16 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_00650 1bca48441b5dad245080da8c13844925 244 Pfam PF03006 Haemolysin-III related 41 230 7.7E-23 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 C4901_13335 f7601b07c0433b0a043362d535e3252a 190 SUPERFAMILY SSF51182 12 148 6.23E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_13335 f7601b07c0433b0a043362d535e3252a 190 Pfam PF04115 Ureidoglycolate lyase 68 149 5.2E-10 T 14-10-2018 IPR007247 Ureidoglycolate lyase GO:0000256|GO:0050385 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 C4901_13335 f7601b07c0433b0a043362d535e3252a 190 Gene3D G3DSA:2.60.120.480 12 169 1.5E-15 T 14-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 C4901_05745 0ee2940450c68745b8f5cd124ff5d677 170 Gene3D G3DSA:2.40.160.20 22 169 1.7E-16 T 14-10-2018 C4901_05745 0ee2940450c68745b8f5cd124ff5d677 170 Pfam PF13505 Outer membrane protein beta-barrel domain 6 167 9.0E-9 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel C4901_05745 0ee2940450c68745b8f5cd124ff5d677 170 SUPERFAMILY SSF56925 18 167 2.28E-12 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C4901_10780 c53c0e636319c89b5076269cb14ea933 496 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 17 362 6.6E-123 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 C4901_10780 c53c0e636319c89b5076269cb14ea933 496 Pfam PF13742 OB-fold nucleic acid binding domain 16 108 2.2E-27 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 C4901_10780 c53c0e636319c89b5076269cb14ea933 496 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 13 492 28.611 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 C4901_10780 c53c0e636319c89b5076269cb14ea933 496 Pfam PF02601 Exonuclease VII, large subunit 131 489 1.7E-90 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 C4901_16390 09fff8b95e0aad22840c5e1802c8970d 180 Pfam PF02566 OsmC-like protein 70 176 2.8E-21 T 14-10-2018 IPR003718 OsmC/Ohr family C4901_16390 09fff8b95e0aad22840c5e1802c8970d 180 Gene3D G3DSA:3.30.300.20 10 168 1.0E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_16390 09fff8b95e0aad22840c5e1802c8970d 180 SUPERFAMILY SSF82784 14 178 2.09E-35 T 14-10-2018 IPR036102 OsmC/Ohr superfamily C4901_16160 31feb7492b69f6f75cef43afd819051b 450 Pfam PF07282 Putative transposase DNA-binding domain 327 395 4.3E-16 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_03655 1059bb0d83e41086bf05e1c31b731280 69 Pfam PF02040 Arsenical pump membrane protein 1 65 5.2E-24 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03655 1059bb0d83e41086bf05e1c31b731280 69 PRINTS PR00758 Arsenical pump membrane protein signature 4 29 1.2E-20 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03655 1059bb0d83e41086bf05e1c31b731280 69 PRINTS PR00758 Arsenical pump membrane protein signature 37 61 1.2E-20 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_11990 cb860eef5f86f98c041bb372229cc8d4 760 SUPERFAMILY SSF53300 568 754 3.42E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_11990 cb860eef5f86f98c041bb372229cc8d4 760 Gene3D G3DSA:3.40.50.410 568 755 6.6E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_11990 cb860eef5f86f98c041bb372229cc8d4 760 SMART SM00327 567 759 6.5E-12 T 14-10-2018 IPR002035 von Willebrand factor, type A C4901_11990 cb860eef5f86f98c041bb372229cc8d4 760 Pfam PF00092 von Willebrand factor type A domain 572 729 5.2E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A C4901_11355 43d0d8aeeddf493eb189f7a39df2d00e 438 SUPERFAMILY SSF53383 4 433 2.86E-181 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_11355 43d0d8aeeddf493eb189f7a39df2d00e 438 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 6 433 54.13 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C4901_11355 43d0d8aeeddf493eb189f7a39df2d00e 438 PIRSF PIRSF000412 1 437 8.3E-173 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C4901_11355 43d0d8aeeddf493eb189f7a39df2d00e 438 Gene3D G3DSA:3.90.1150.10 383 432 3.2E-10 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_11355 43d0d8aeeddf493eb189f7a39df2d00e 438 Pfam PF00464 Serine hydroxymethyltransferase 7 382 6.8E-180 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C4901_11355 43d0d8aeeddf493eb189f7a39df2d00e 438 Gene3D G3DSA:3.40.640.10 36 288 1.1E-182 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_11355 43d0d8aeeddf493eb189f7a39df2d00e 438 Gene3D G3DSA:3.90.1150.10 9 382 1.1E-182 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_11355 43d0d8aeeddf493eb189f7a39df2d00e 438 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 C4901_06215 a4b8b73ee2db1abae257b9b9628bf47b 245 Pfam PF05818 Enterobacterial TraT complement resistance protein 42 245 4.3E-53 T 14-10-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 C4901_10285 43414ea443357a1321cf37610a76a295 143 SMART SM00748 14 123 1.3E-16 T 14-10-2018 IPR007842 HEPN domain C4901_10285 43414ea443357a1321cf37610a76a295 143 SUPERFAMILY SSF81593 8 127 1.45E-26 T 14-10-2018 C4901_10285 43414ea443357a1321cf37610a76a295 143 Gene3D G3DSA:1.20.120.330 3 130 2.6E-28 T 14-10-2018 C4901_10285 43414ea443357a1321cf37610a76a295 143 Pfam PF05168 HEPN domain 11 127 7.6E-23 T 14-10-2018 IPR007842 HEPN domain C4901_14520 c4fbe622a08fd1ff44c63226b92f57a8 559 SMART SM00283 295 556 6.4E-79 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C4901_14520 c4fbe622a08fd1ff44c63226b92f57a8 559 SUPERFAMILY SSF58104 259 557 2.75E-63 T 14-10-2018 C4901_14520 c4fbe622a08fd1ff44c63226b92f57a8 559 Gene3D G3DSA:1.10.287.950 230 558 1.3E-61 T 14-10-2018 C4901_14520 c4fbe622a08fd1ff44c63226b92f57a8 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 340 523 9.0E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 C4901_06235 26aa6e63274f42d258758c0fab64d835 406 SUPERFAMILY SSF141130 16 383 6.8E-81 T 14-10-2018 C4901_06235 26aa6e63274f42d258758c0fab64d835 406 Pfam PF03069 Acetamidase/Formamidase family 7 384 1.2E-177 T 14-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 C4901_06235 26aa6e63274f42d258758c0fab64d835 406 Gene3D G3DSA:2.60.120.580 10 136 1.6E-16 T 14-10-2018 C4901_06235 26aa6e63274f42d258758c0fab64d835 406 Gene3D G3DSA:2.60.120.580 193 281 8.7E-22 T 14-10-2018 C4901_02225 0919cd85b19dd5c99510fe9dc0b3b88d 359 Pfam PF06580 Histidine kinase 156 234 9.3E-22 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 C4901_08215 a3efb19ab7932600ca729d64de67a3d6 69 Pfam PF09360 Iron-binding zinc finger CDGSH type 9 53 4.2E-18 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 C4901_08215 a3efb19ab7932600ca729d64de67a3d6 69 SMART SM00704 18 59 8.4E-10 T 14-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 C4901_08215 a3efb19ab7932600ca729d64de67a3d6 69 Gene3D G3DSA:3.40.5.90 1 66 6.6E-19 T 14-10-2018 C4901_17105 2313ec4990b8b7476d9b1459895ce784 402 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 22 397 18.411 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 C4901_17105 2313ec4990b8b7476d9b1459895ce784 402 Pfam PF06965 Na+/H+ antiporter 1 29 391 3.9E-112 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 C4901_17105 2313ec4990b8b7476d9b1459895ce784 402 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 29 391 2.0E-90 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 C4901_17105 2313ec4990b8b7476d9b1459895ce784 402 Gene3D G3DSA:1.20.1530.10 24 399 3.0E-110 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily C4901_00125 76508520bdfdb238dd189e0466cbb061 452 SMART SM00729 152 361 5.1E-10 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_00125 76508520bdfdb238dd189e0466cbb061 452 Pfam PF04055 Radical SAM superfamily 157 316 2.2E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_00125 76508520bdfdb238dd189e0466cbb061 452 SUPERFAMILY SSF102114 141 324 3.53E-25 T 14-10-2018 C4901_00125 76508520bdfdb238dd189e0466cbb061 452 Gene3D G3DSA:3.80.30.20 149 330 7.8E-12 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe C4901_02975 6b5a3d57699bf3f134ced942e29eb80b 291 PIRSF PIRSF005052 1 286 6.3E-109 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C4901_02975 6b5a3d57699bf3f134ced942e29eb80b 291 SUPERFAMILY SSF52540 3 154 2.22E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_02975 6b5a3d57699bf3f134ced942e29eb80b 291 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 284 39.803 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C4901_02975 6b5a3d57699bf3f134ced942e29eb80b 291 Pfam PF03668 P-loop ATPase protein family 1 283 5.2E-99 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 C4901_02975 6b5a3d57699bf3f134ced942e29eb80b 291 Gene3D G3DSA:3.40.50.300 2 158 3.7E-9 T 14-10-2018 C4901_06750 cfe05a5c513eec8efbc3f7f3b98e767a 161 Pfam PF03050 Transposase IS66 family 28 101 8.0E-17 T 14-10-2018 IPR004291 Transposase, IS66 C4901_16245 bbca0ef9ce63ccf6baa023307371b7b9 188 Pfam PF01292 Prokaryotic cytochrome b561 6 183 1.6E-11 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 C4901_16245 bbca0ef9ce63ccf6baa023307371b7b9 188 SUPERFAMILY SSF81342 5 188 8.63E-12 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 C4901_16245 bbca0ef9ce63ccf6baa023307371b7b9 188 Gene3D G3DSA:1.20.950.20 1 177 2.8E-8 T 14-10-2018 C4901_06925 a2ee6bf85e3b8b883ecf314a5127b21b 159 Pfam PF13671 AAA domain 4 118 6.5E-9 T 14-10-2018 C4901_06925 a2ee6bf85e3b8b883ecf314a5127b21b 159 Gene3D G3DSA:3.40.50.300 1 154 4.0E-21 T 14-10-2018 C4901_06925 a2ee6bf85e3b8b883ecf314a5127b21b 159 SUPERFAMILY SSF52540 2 126 5.81E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16325 afe12dbba845bc824971d87723a20286 245 Gene3D G3DSA:1.10.287.540 106 141 1.8E-6 T 14-10-2018 C4901_16325 afe12dbba845bc824971d87723a20286 245 PIRSF PIRSF016482 49 244 1.3E-49 T 14-10-2018 IPR007445 Pilus assembly protein, PilO C4901_16325 afe12dbba845bc824971d87723a20286 245 Pfam PF04350 Pilus assembly protein, PilO 101 238 2.1E-47 T 14-10-2018 IPR007445 Pilus assembly protein, PilO C4901_16325 afe12dbba845bc824971d87723a20286 245 Gene3D G3DSA:3.30.70.60 143 245 8.2E-33 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 C4901_03085 d3338170113f735cb5b8ecb9abbbd07f 263 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 C4901_03085 d3338170113f735cb5b8ecb9abbbd07f 263 Gene3D G3DSA:3.40.50.300 1 244 3.0E-60 T 14-10-2018 C4901_03085 d3338170113f735cb5b8ecb9abbbd07f 263 Pfam PF00005 ABC transporter 17 164 9.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_03085 d3338170113f735cb5b8ecb9abbbd07f 263 SMART SM00382 25 213 3.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03085 d3338170113f735cb5b8ecb9abbbd07f 263 SUPERFAMILY SSF52540 2 228 1.39E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_00965 cd11ae9a42bbf12152f105e8fcb6c932 77 Gene3D G3DSA:3.30.70.20 11 72 3.3E-15 T 14-10-2018 C4901_00965 cd11ae9a42bbf12152f105e8fcb6c932 77 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 53 64 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_00965 cd11ae9a42bbf12152f105e8fcb6c932 77 Pfam PF13187 4Fe-4S dicluster domain 24 67 1.6E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_00965 cd11ae9a42bbf12152f105e8fcb6c932 77 SUPERFAMILY SSF54862 5 70 4.57E-14 T 14-10-2018 C4901_10350 08039eadbbfb6cad64b1b3f0146e1aa2 546 Hamap MF_01227 CTP synthase [pyrG]. 1 535 50.16 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C4901_10350 08039eadbbfb6cad64b1b3f0146e1aa2 546 TIGRFAM TIGR00337 PyrG: CTP synthase 1 530 3.0E-241 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C4901_10350 08039eadbbfb6cad64b1b3f0146e1aa2 546 Pfam PF06418 CTP synthase N-terminus 1 261 4.3E-124 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 C4901_10350 08039eadbbfb6cad64b1b3f0146e1aa2 546 Pfam PF00117 Glutamine amidotransferase class-I 296 530 6.2E-56 T 14-10-2018 IPR017926 Glutamine amidotransferase C4901_10350 08039eadbbfb6cad64b1b3f0146e1aa2 546 Gene3D G3DSA:3.40.50.300 1 278 7.3E-129 T 14-10-2018 C4901_10350 08039eadbbfb6cad64b1b3f0146e1aa2 546 Gene3D G3DSA:3.40.50.880 281 538 6.8E-100 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_10350 08039eadbbfb6cad64b1b3f0146e1aa2 546 SUPERFAMILY SSF52540 1 261 9.86E-120 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10350 08039eadbbfb6cad64b1b3f0146e1aa2 546 SUPERFAMILY SSF52317 286 534 1.11E-83 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_11930 7254c280ada185fe4778be2d746f395a 178 SUPERFAMILY SSF56420 2 164 3.4E-53 T 14-10-2018 IPR036821 Peptide deformylase superfamily C4901_11930 7254c280ada185fe4778be2d746f395a 178 Hamap MF_00163 Peptide deformylase [def]. 2 167 25.665 T 14-10-2018 IPR023635 Peptide deformylase C4901_11930 7254c280ada185fe4778be2d746f395a 178 Gene3D G3DSA:3.90.45.10 1 178 2.2E-58 T 14-10-2018 IPR036821 Peptide deformylase superfamily C4901_11930 7254c280ada185fe4778be2d746f395a 178 Pfam PF01327 Polypeptide deformylase 4 159 1.1E-42 T 14-10-2018 IPR023635 Peptide deformylase C4901_11930 7254c280ada185fe4778be2d746f395a 178 PIRSF PIRSF004749 1 172 1.3E-45 T 14-10-2018 IPR023635 Peptide deformylase C4901_11930 7254c280ada185fe4778be2d746f395a 178 PRINTS PR01576 Peptide deformylase signature 98 109 8.2E-27 T 14-10-2018 IPR023635 Peptide deformylase C4901_11930 7254c280ada185fe4778be2d746f395a 178 PRINTS PR01576 Peptide deformylase signature 110 128 8.2E-27 T 14-10-2018 IPR023635 Peptide deformylase C4901_11930 7254c280ada185fe4778be2d746f395a 178 PRINTS PR01576 Peptide deformylase signature 34 63 8.2E-27 T 14-10-2018 IPR023635 Peptide deformylase C4901_11930 7254c280ada185fe4778be2d746f395a 178 PRINTS PR01576 Peptide deformylase signature 129 158 8.2E-27 T 14-10-2018 IPR023635 Peptide deformylase C4901_11930 7254c280ada185fe4778be2d746f395a 178 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 10 160 3.8E-31 T 14-10-2018 IPR023635 Peptide deformylase C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 153 298 3.0E-12 T 14-10-2018 IPR000160 GGDEF domain C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 SMART SM00267 135 301 1.2E-5 T 14-10-2018 IPR000160 GGDEF domain C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 Pfam PF00072 Response regulator receiver domain 18 129 6.3E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 Gene3D G3DSA:3.30.70.270 149 301 1.8E-19 T 14-10-2018 C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 Gene3D G3DSA:3.40.50.2300 16 148 9.8E-31 T 14-10-2018 C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 SMART SM00448 16 131 1.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 SUPERFAMILY SSF55073 150 298 3.3E-16 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 Pfam PF00990 Diguanylate cyclase, GGDEF domain 150 297 1.3E-10 T 14-10-2018 IPR000160 GGDEF domain C4901_04150 ca9f87a78e2bb490861ef7e71637ddcf 424 SUPERFAMILY SSF52172 14 144 4.41E-32 T 14-10-2018 IPR011006 CheY-like superfamily C4901_07420 9732f5c756cce41d450166d174686638 379 Pfam PF05425 Copper resistance protein D 192 305 2.0E-21 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 C4901_12915 649b340b0ffa6e94357dde19132f606d 410 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 18 162 2.2E-10 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C4901_12915 649b340b0ffa6e94357dde19132f606d 410 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 211 409 1.5E-27 T 14-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) C4901_12915 649b340b0ffa6e94357dde19132f606d 410 Gene3D G3DSA:2.40.160.60 24 410 3.6E-56 T 14-10-2018 C4901_12915 649b340b0ffa6e94357dde19132f606d 410 SUPERFAMILY SSF56935 24 409 4.03E-43 T 14-10-2018 C4901_00995 09e2980ec7383d7e2745310c012a5933 240 SUPERFAMILY SSF161098 43 223 3.53E-30 T 14-10-2018 IPR035906 MetI-like superfamily C4901_00995 09e2980ec7383d7e2745310c012a5933 240 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 66 233 4.8E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C4901_00995 09e2980ec7383d7e2745310c012a5933 240 Gene3D G3DSA:1.10.3720.10 17 235 2.8E-24 T 14-10-2018 IPR035906 MetI-like superfamily C4901_11040 5e5a6fcba04c14b29eb983a927596468 241 SUPERFAMILY SSF52540 12 119 6.76E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11040 5e5a6fcba04c14b29eb983a927596468 241 Gene3D G3DSA:3.40.50.300 9 169 1.8E-5 T 14-10-2018 C4901_03735 ce0ec21dd5b1ca82161133aa71d96031 158 Gene3D G3DSA:3.40.30.10 2 155 2.9E-45 T 14-10-2018 C4901_03735 ce0ec21dd5b1ca82161133aa71d96031 158 SUPERFAMILY SSF52833 4 154 4.81E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_03735 ce0ec21dd5b1ca82161133aa71d96031 158 PIRSF PIRSF000239 1 156 4.2E-29 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_03735 ce0ec21dd5b1ca82161133aa71d96031 158 Pfam PF00578 AhpC/TSA family 6 133 1.2E-34 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_00220 ec07eaff85b0c08be841be89a21d125d 450 SUPERFAMILY SSF56954 3 445 1.44E-36 T 14-10-2018 C4901_00220 ec07eaff85b0c08be841be89a21d125d 450 Gene3D G3DSA:1.20.1600.10 67 449 3.5E-26 T 14-10-2018 C4901_05050 9c9dc706b6862ea3f92338e079df9a72 242 Pfam PF12323 Helix-turn-helix domain 4 47 1.6E-8 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain C4901_04285 986249496231abfc6b35335cd7232d69 151 Gene3D G3DSA:3.40.50.620 1 142 1.8E-26 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_04285 986249496231abfc6b35335cd7232d69 151 Pfam PF00582 Universal stress protein family 3 140 2.9E-21 T 14-10-2018 IPR006016 UspA C4901_04285 986249496231abfc6b35335cd7232d69 151 SUPERFAMILY SSF52402 2 140 5.44E-26 T 14-10-2018 C4901_01495 5fdf4c94b232a98701e9dc1f4fb42261 296 Pfam PF14236 Domain of unknown function (DUF4338) 69 289 4.2E-69 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_13260 5fdf4c94b232a98701e9dc1f4fb42261 296 Pfam PF14236 Domain of unknown function (DUF4338) 69 289 4.2E-69 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_10620 5fdf4c94b232a98701e9dc1f4fb42261 296 Pfam PF14236 Domain of unknown function (DUF4338) 69 289 4.2E-69 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_06290 5fdf4c94b232a98701e9dc1f4fb42261 296 Pfam PF14236 Domain of unknown function (DUF4338) 69 289 4.2E-69 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_15815 5fdf4c94b232a98701e9dc1f4fb42261 296 Pfam PF14236 Domain of unknown function (DUF4338) 69 289 4.2E-69 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_08765 3a50d72865b59650f2bee2d706aca409 281 Pfam PF01226 Formate/nitrite transporter 35 268 8.6E-43 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 C4901_08765 3a50d72865b59650f2bee2d706aca409 281 Gene3D G3DSA:1.20.1080.10 30 276 3.1E-36 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 C4901_14530 b5acf8f08af7e0f18dddfd17302de6d5 120 Pfam PF00072 Response regulator receiver domain 6 117 9.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_14530 b5acf8f08af7e0f18dddfd17302de6d5 120 SMART SM00448 4 117 3.3E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_14530 b5acf8f08af7e0f18dddfd17302de6d5 120 Gene3D G3DSA:3.40.50.12740 4 120 4.9E-44 T 14-10-2018 C4901_14530 b5acf8f08af7e0f18dddfd17302de6d5 120 SUPERFAMILY SSF52172 5 120 6.55E-37 T 14-10-2018 IPR011006 CheY-like superfamily C4901_13985 77cb7cc587910ff090afbe2a5322f967 488 SUPERFAMILY SSF52374 350 481 7.32E-23 T 14-10-2018 C4901_13985 77cb7cc587910ff090afbe2a5322f967 488 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 352 416 2.4E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C4901_13985 77cb7cc587910ff090afbe2a5322f967 488 Pfam PF01467 Cytidylyltransferase-like 355 449 1.6E-13 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 C4901_13985 77cb7cc587910ff090afbe2a5322f967 488 Pfam PF00294 pfkB family carbohydrate kinase 17 317 1.8E-29 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB C4901_13985 77cb7cc587910ff090afbe2a5322f967 488 SUPERFAMILY SSF53613 18 325 7.64E-43 T 14-10-2018 IPR029056 Ribokinase-like C4901_13985 77cb7cc587910ff090afbe2a5322f967 488 Gene3D G3DSA:3.40.50.620 327 487 7.3E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_13985 77cb7cc587910ff090afbe2a5322f967 488 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 57 80 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 C4901_13985 77cb7cc587910ff090afbe2a5322f967 488 Gene3D G3DSA:3.40.1190.20 8 322 3.2E-76 T 14-10-2018 IPR029056 Ribokinase-like C4901_12450 d2905a8fb8f3f9ebaa803db15762863b 320 Gene3D G3DSA:3.40.50.720 161 309 2.0E-33 T 14-10-2018 C4901_12450 d2905a8fb8f3f9ebaa803db15762863b 320 Pfam PF13478 XdhC Rossmann domain 162 302 2.0E-29 T 14-10-2018 IPR027051 XdhC Rossmann domain C4901_07075 f5661142c51b0be9a9d4c46f6b829ee2 326 Gene3D G3DSA:2.50.20.10 21 198 6.6E-54 T 14-10-2018 C4901_07075 f5661142c51b0be9a9d4c46f6b829ee2 326 Pfam PF03888 MucB/RseB N-terminal domain 23 197 1.8E-56 T 14-10-2018 IPR033434 MucB/RseB, N-terminal C4901_07075 f5661142c51b0be9a9d4c46f6b829ee2 326 PIRSF PIRSF005427 5 320 2.2E-84 T 14-10-2018 IPR005588 MucB/RseB C4901_07075 f5661142c51b0be9a9d4c46f6b829ee2 326 Gene3D G3DSA:3.30.200.100 220 318 6.1E-20 T 14-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily C4901_07075 f5661142c51b0be9a9d4c46f6b829ee2 326 Pfam PF17188 MucB/RseB C-terminal domain 221 315 1.7E-21 T 14-10-2018 IPR033436 MucB/RseB, C-terminal C4901_08905 20f6df4972d1e2cc4b42caf3619ec37b 81 SUPERFAMILY SSF52833 4 69 6.52E-10 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_08905 20f6df4972d1e2cc4b42caf3619ec37b 81 Pfam PF00462 Glutaredoxin 7 61 7.8E-8 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C4901_08905 20f6df4972d1e2cc4b42caf3619ec37b 81 Gene3D G3DSA:3.40.30.10 4 76 2.8E-14 T 14-10-2018 C4901_01555 1546c686b2824ba6680105a4983b3c79 304 Pfam PF02754 Cysteine-rich domain 160 246 1.3E-10 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_01555 1546c686b2824ba6680105a4983b3c79 304 Pfam PF02754 Cysteine-rich domain 6 88 6.1E-8 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_01795 158372b74d4b32883ecb9d3fcec2c509 196 Gene3D G3DSA:1.25.40.10 2 181 4.5E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_01795 158372b74d4b32883ecb9d3fcec2c509 196 Pfam PF14559 Tetratricopeptide repeat 58 116 5.7E-6 T 14-10-2018 C4901_01795 158372b74d4b32883ecb9d3fcec2c509 196 SMART SM00028 7 40 7.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_01795 158372b74d4b32883ecb9d3fcec2c509 196 SMART SM00028 109 142 1.4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 C4901_01795 158372b74d4b32883ecb9d3fcec2c509 196 SUPERFAMILY SSF48452 6 171 9.66E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_07550 be607afe31fd749add8a39c2202efed5 268 Pfam PF06182 ABC-2 family transporter protein 40 267 1.2E-40 T 14-10-2018 IPR010390 Protein of unknown function DUF990 C4901_13700 35c2382bb4c35b706c6b0734305abd11 213 Pfam PF03090 Replicase family 27 156 4.1E-45 T 14-10-2018 IPR004322 Plasmid replicase, bacterial C4901_13700 35c2382bb4c35b706c6b0734305abd11 213 Gene3D G3DSA:1.10.340.50 173 208 3.9E-6 T 14-10-2018 C4901_00245 0810709d78160413a6128c8a1c325fae 608 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 138 574 98.937 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C4901_00245 0810709d78160413a6128c8a1c325fae 608 Gene3D G3DSA:3.20.20.540 193 505 1.7E-151 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C4901_00245 0810709d78160413a6128c8a1c325fae 608 Pfam PF01964 Radical SAM ThiC family 139 570 3.4E-199 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C4901_00245 0810709d78160413a6128c8a1c325fae 608 Pfam PF13667 ThiC-associated domain 22 100 6.0E-26 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C4901_00245 0810709d78160413a6128c8a1c325fae 608 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 138 572 1.1E-213 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 C4901_08560 d931adffdc234577949152b8f13ff3d3 144 Gene3D G3DSA:3.40.50.1010 2 125 4.2E-7 T 14-10-2018 C4901_08560 d931adffdc234577949152b8f13ff3d3 144 Pfam PF01850 PIN domain 3 132 1.6E-8 T 14-10-2018 IPR002716 PIN domain C4901_08560 d931adffdc234577949152b8f13ff3d3 144 SUPERFAMILY SSF88723 3 136 6.28E-10 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_12280 5eeb908b5481f01fa9ecbb7504d83fb5 352 Gene3D G3DSA:4.10.480.10 201 280 1.3E-16 T 14-10-2018 IPR037148 [NiFe]-hydrogenase, small subunit, C-terminal domain superfamily C4901_12280 5eeb908b5481f01fa9ecbb7504d83fb5 352 Gene3D G3DSA:3.40.50.700 1 199 5.7E-46 T 14-10-2018 IPR037024 [NiFe]-hydrogenase, small subunit, N-terminal domain superfamily C4901_12280 5eeb908b5481f01fa9ecbb7504d83fb5 352 PIRSF PIRSF000310 1 325 3.9E-81 T 14-10-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 C4901_12280 5eeb908b5481f01fa9ecbb7504d83fb5 352 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 202 277 3.3E-21 T 14-10-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal C4901_12280 5eeb908b5481f01fa9ecbb7504d83fb5 352 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 15 178 1.3E-27 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_12280 5eeb908b5481f01fa9ecbb7504d83fb5 352 SUPERFAMILY SSF56770 4 280 2.88E-74 T 14-10-2018 C4901_15135 445abceeb9f3d9aa6164edafae67ce35 435 Pfam PF12323 Helix-turn-helix domain 5 47 9.1E-8 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain C4901_15135 445abceeb9f3d9aa6164edafae67ce35 435 Pfam PF01385 Probable transposase 180 299 5.4E-16 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C4901_03070 7c3f2f3bbab0ce8919814c5b05727ac9 149 Gene3D G3DSA:2.130.10.10 28 130 1.2E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_03070 7c3f2f3bbab0ce8919814c5b05727ac9 149 SUPERFAMILY SSF50974 73 126 3.14E-6 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 C4901_03920 e67b0ebc374afededff4362276281571 420 SUPERFAMILY SSF56954 9 416 1.96E-45 T 14-10-2018 C4901_03920 e67b0ebc374afededff4362276281571 420 Pfam PF02321 Outer membrane efflux protein 230 414 9.5E-11 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_03920 e67b0ebc374afededff4362276281571 420 Pfam PF02321 Outer membrane efflux protein 31 204 3.3E-9 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_03920 e67b0ebc374afededff4362276281571 420 Gene3D G3DSA:1.20.1600.10 25 417 1.2E-40 T 14-10-2018 C4901_00335 98cb8c82d63909e91ccad1bd6421ea61 371 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 85 330 2.7E-38 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_00335 98cb8c82d63909e91ccad1bd6421ea61 371 Gene3D G3DSA:3.40.50.2000 7 170 1.1E-33 T 14-10-2018 C4901_00335 98cb8c82d63909e91ccad1bd6421ea61 371 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 13 326 1.7E-91 T 14-10-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative C4901_00335 98cb8c82d63909e91ccad1bd6421ea61 371 SUPERFAMILY SSF53756 12 362 9.42E-78 T 14-10-2018 C4901_00335 98cb8c82d63909e91ccad1bd6421ea61 371 Gene3D G3DSA:3.40.50.2000 184 364 2.4E-44 T 14-10-2018 C4901_05705 0508a77aef9fefd4e573767a5dcf3a86 330 Gene3D G3DSA:1.25.40.10 153 313 6.4E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_05705 0508a77aef9fefd4e573767a5dcf3a86 330 SUPERFAMILY SSF48452 217 302 1.36E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_13565 36174c1d20af0585f42cda1fac620392 99 SUPERFAMILY SSF52540 18 96 3.01E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13565 36174c1d20af0585f42cda1fac620392 99 Pfam PF13361 UvrD-like helicase C-terminal domain 19 82 8.9E-21 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 C4901_13565 36174c1d20af0585f42cda1fac620392 99 Gene3D G3DSA:3.40.50.300 15 94 2.9E-27 T 14-10-2018 C4901_12785 00a50cc7f01031568c14b23730b24116 163 Pfam PF02674 Colicin V production protein 4 144 1.3E-30 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 C4901_11080 367d6fbbae23fc210aba0ca96fdef619 638 Pfam PF13245 AAA domain 23 244 1.4E-16 T 14-10-2018 C4901_11080 367d6fbbae23fc210aba0ca96fdef619 638 SUPERFAMILY SSF52540 19 616 8.0E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11080 367d6fbbae23fc210aba0ca96fdef619 638 Gene3D G3DSA:3.40.50.300 512 625 4.6E-8 T 14-10-2018 C4901_10660 0542dfbd7118ee6cf48aede418c20ba1 393 Gene3D G3DSA:1.20.1250.20 12 190 2.3E-11 T 14-10-2018 C4901_10660 0542dfbd7118ee6cf48aede418c20ba1 393 Pfam PF07690 Major Facilitator Superfamily 42 233 1.1E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_10660 0542dfbd7118ee6cf48aede418c20ba1 393 SUPERFAMILY SSF103473 13 384 2.62E-29 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_10660 0542dfbd7118ee6cf48aede418c20ba1 393 Gene3D G3DSA:1.20.1250.20 209 390 4.4E-9 T 14-10-2018 C4901_06600 e00f95b3014b0ed78d4b7906e3db0b38 46 SUPERFAMILY SSF143120 4 43 8.5E-10 T 14-10-2018 IPR036165 YefM-like superfamily C4901_06600 e00f95b3014b0ed78d4b7906e3db0b38 46 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 5 42 6.1E-12 T 14-10-2018 C4901_06600 e00f95b3014b0ed78d4b7906e3db0b38 46 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 3 43 2.8E-11 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_06600 e00f95b3014b0ed78d4b7906e3db0b38 46 Gene3D G3DSA:3.40.1620.10 1 40 9.3E-10 T 14-10-2018 C4901_00400 3a36d0da6445b788992ba1d0cc46e492 73 Pfam PF10276 Zinc-finger domain 39 61 4.7E-8 T 14-10-2018 IPR019401 Zinc finger, CHCC-type Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_00400 3a36d0da6445b788992ba1d0cc46e492 73 Gene3D G3DSA:2.60.260.40 16 64 5.8E-10 T 14-10-2018 C4901_03050 a37060f3b3ff7a3cbddd9c44be6f9239 78 Pfam PF01402 Ribbon-helix-helix protein, copG family 4 35 5.3E-5 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 C4901_16810 d07268ca92c3c6dcc08e343ecf4879d4 321 SUPERFAMILY SSF54909 15 319 5.9E-78 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel C4901_16810 d07268ca92c3c6dcc08e343ecf4879d4 321 Pfam PF07682 Sulphur oxygenase reductase 16 316 5.6E-123 T 14-10-2018 IPR011661 Sulphur oxygenase reductase KEGG: 00920+1.13.11.55|MetaCyc: PWY-5302 C4901_06245 9defa881130f5e21998aaf6ff4b0232a 555 Gene3D G3DSA:1.10.4160.10 19 468 4.2E-19 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily C4901_15820 3f05f09a2cf04329314e16a9e83b0391 88 SUPERFAMILY SSF56925 41 88 9.68E-10 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C4901_15820 3f05f09a2cf04329314e16a9e83b0391 88 Pfam PF13505 Outer membrane protein beta-barrel domain 39 87 5.5E-7 T 14-10-2018 IPR027385 Outer membrane protein beta-barrel C4901_15820 3f05f09a2cf04329314e16a9e83b0391 88 Gene3D G3DSA:2.40.160.20 1 88 3.1E-11 T 14-10-2018 C4901_12195 d2c684bc257073842aa79df2d4c94b22 344 PIRSF PIRSF005644 10 344 3.7E-121 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE C4901_12195 d2c684bc257073842aa79df2d4c94b22 344 Gene3D G3DSA:3.30.1330.10 15 163 8.9E-45 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_12195 d2c684bc257073842aa79df2d4c94b22 344 Pfam PF00586 AIR synthase related protein, N-terminal domain 58 157 2.1E-17 T 14-10-2018 IPR016188 PurM-like, N-terminal domain C4901_12195 d2c684bc257073842aa79df2d4c94b22 344 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 13 344 7.3E-136 T 14-10-2018 IPR011854 Carbamoyl dehydratase HypE C4901_12195 d2c684bc257073842aa79df2d4c94b22 344 SUPERFAMILY SSF56042 164 339 1.94E-45 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_12195 d2c684bc257073842aa79df2d4c94b22 344 SUPERFAMILY SSF55326 15 161 1.55E-29 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily C4901_12195 d2c684bc257073842aa79df2d4c94b22 344 Gene3D G3DSA:3.90.650.10 164 344 1.7E-54 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily C4901_12195 d2c684bc257073842aa79df2d4c94b22 344 Pfam PF02769 AIR synthase related protein, C-terminal domain 170 318 4.1E-29 T 14-10-2018 IPR010918 PurM-like, C-terminal domain C4901_03475 d6e2147269bc0ac2e41d8c3023279493 153 Pfam PF01609 Transposase DDE domain 43 137 5.3E-8 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 127 158 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 Gene3D G3DSA:1.10.10.10 203 271 3.2E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 83 270 5.4E-95 T 14-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 SUPERFAMILY SSF88659 204 266 7.1E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 Gene3D G3DSA:1.10.1740.10 80 201 9.3E-41 T 14-10-2018 C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 Pfam PF04542 Sigma-70 region 2 105 169 2.5E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 Pfam PF08281 Sigma-70, region 4 212 261 7.6E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 SUPERFAMILY SSF88946 86 188 3.92E-29 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 C4901_07065 d799243d0aaebe9d1f41ef28170bbe36 272 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 101 266 3.4E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 C4901_13135 a7af5464699484c2e796929441334e47 240 PRINTS PR00811 Bacterial general secretion pathway protein D signature 11 21 7.3E-9 T 14-10-2018 IPR001775 GspD/PilQ family C4901_13135 a7af5464699484c2e796929441334e47 240 PRINTS PR00811 Bacterial general secretion pathway protein D signature 113 131 7.3E-9 T 14-10-2018 IPR001775 GspD/PilQ family C4901_13135 a7af5464699484c2e796929441334e47 240 PRINTS PR00811 Bacterial general secretion pathway protein D signature 136 150 7.3E-9 T 14-10-2018 IPR001775 GspD/PilQ family C4901_13135 a7af5464699484c2e796929441334e47 240 Pfam PF00263 Bacterial type II and III secretion system protein 7 148 8.1E-41 T 14-10-2018 IPR004846 Type II/III secretion system GO:0009306 C4901_02180 293b0943a31043b183f5ce9620bdfa24 484 SUPERFAMILY SSF56935 40 443 5.86E-8 T 14-10-2018 C4901_02180 293b0943a31043b183f5ce9620bdfa24 484 Gene3D G3DSA:2.40.160.10 68 174 2.0E-5 T 14-10-2018 IPR023614 Porin domain superfamily C4901_13345 fb66cb10349ff82f0c52577eedfd5ea7 152 Pfam PF01799 [2Fe-2S] binding domain 75 144 4.1E-25 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 C4901_13345 fb66cb10349ff82f0c52577eedfd5ea7 152 Gene3D G3DSA:3.30.365.10 3 152 9.6E-54 T 14-10-2018 C4901_13345 fb66cb10349ff82f0c52577eedfd5ea7 152 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 41 49 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 C4901_13345 fb66cb10349ff82f0c52577eedfd5ea7 152 SUPERFAMILY SSF54292 4 80 5.66E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_13345 fb66cb10349ff82f0c52577eedfd5ea7 152 SUPERFAMILY SSF47741 75 149 2.49E-27 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily C4901_13345 fb66cb10349ff82f0c52577eedfd5ea7 152 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 54 4.3E-5 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C4901_05250 5bb6de3a6c15d112c6ab8a4edef09383 704 Gene3D G3DSA:3.40.50.300 473 639 1.3E-33 T 14-10-2018 C4901_05250 5bb6de3a6c15d112c6ab8a4edef09383 704 SUPERFAMILY SSF52540 487 667 6.81E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05250 5bb6de3a6c15d112c6ab8a4edef09383 704 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 254 380 7.7E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_05250 5bb6de3a6c15d112c6ab8a4edef09383 704 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 495 616 9.4E-25 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_05250 5bb6de3a6c15d112c6ab8a4edef09383 704 SUPERFAMILY SSF52540 225 412 1.11E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_05250 5bb6de3a6c15d112c6ab8a4edef09383 704 Gene3D G3DSA:3.40.50.300 229 396 1.7E-23 T 14-10-2018 C4901_05250 5bb6de3a6c15d112c6ab8a4edef09383 704 SMART SM00382 250 384 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_05250 5bb6de3a6c15d112c6ab8a4edef09383 704 SMART SM00382 492 620 3.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_07780 2ee286ad357f5a1d2142029ebf5ab0c7 292 Gene3D G3DSA:3.40.630.30 70 244 3.9E-40 T 14-10-2018 C4901_07780 2ee286ad357f5a1d2142029ebf5ab0c7 292 PRINTS PR01549 Autoinducer synthesis protein signature 100 122 2.7E-11 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 C4901_07780 2ee286ad357f5a1d2142029ebf5ab0c7 292 PRINTS PR01549 Autoinducer synthesis protein signature 80 99 2.7E-11 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 C4901_07780 2ee286ad357f5a1d2142029ebf5ab0c7 292 PRINTS PR01549 Autoinducer synthesis protein signature 180 201 2.7E-11 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 C4901_07780 2ee286ad357f5a1d2142029ebf5ab0c7 292 PRINTS PR01549 Autoinducer synthesis protein signature 123 141 2.7E-11 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 C4901_07780 2ee286ad357f5a1d2142029ebf5ab0c7 292 PRINTS PR01549 Autoinducer synthesis protein signature 202 223 2.7E-11 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 C4901_07780 2ee286ad357f5a1d2142029ebf5ab0c7 292 SUPERFAMILY SSF55729 68 229 1.04E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_07780 2ee286ad357f5a1d2142029ebf5ab0c7 292 Pfam PF00765 Autoinducer synthase 75 226 1.8E-14 T 14-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 C4901_14935 7a0ec6ef9b76b5731d674f102b908aa7 826 SUPERFAMILY SSF52540 229 441 3.34E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14935 7a0ec6ef9b76b5731d674f102b908aa7 826 Gene3D G3DSA:3.40.50.300 451 704 1.1E-60 T 14-10-2018 C4901_14935 7a0ec6ef9b76b5731d674f102b908aa7 826 SMART SM00487 230 412 7.2E-26 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain C4901_14935 7a0ec6ef9b76b5731d674f102b908aa7 826 Pfam PF00271 Helicase conserved C-terminal domain 530 635 6.7E-19 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_14935 7a0ec6ef9b76b5731d674f102b908aa7 826 SUPERFAMILY SSF52540 443 674 2.94E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14935 7a0ec6ef9b76b5731d674f102b908aa7 826 Pfam PF00176 SNF2 family N-terminal domain 252 513 1.9E-35 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 C4901_14935 7a0ec6ef9b76b5731d674f102b908aa7 826 Gene3D G3DSA:3.40.50.10810 225 420 1.3E-42 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily C4901_14935 7a0ec6ef9b76b5731d674f102b908aa7 826 SMART SM00490 553 635 1.3E-23 T 14-10-2018 IPR001650 Helicase, C-terminal C4901_14640 cdd32930aa1c07960ae1df323b86ab7c 488 SUPERFAMILY SSF103473 8 224 1.96E-11 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_14640 cdd32930aa1c07960ae1df323b86ab7c 488 Pfam PF13000 Acetyl-coenzyme A transporter 1 15 75 8.4E-6 T 14-10-2018 IPR024371 Acetyl-coenzyme A transporter 1-like GO:0008521|GO:0016021 Reactome: R-HSA-425397|Reactome: R-HSA-5619061 C4901_14640 cdd32930aa1c07960ae1df323b86ab7c 488 SUPERFAMILY SSF103473 205 474 4.32E-14 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_14640 cdd32930aa1c07960ae1df323b86ab7c 488 Gene3D G3DSA:1.20.1250.20 230 469 8.7E-9 T 14-10-2018 C4901_14640 cdd32930aa1c07960ae1df323b86ab7c 488 Gene3D G3DSA:1.20.1250.20 4 229 3.9E-8 T 14-10-2018 C4901_12010 5ad58606c9bfbdfcc788c8d2a2c01bec 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 23 214 1.3E-25 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C4901_12010 5ad58606c9bfbdfcc788c8d2a2c01bec 323 SUPERFAMILY SSF51735 19 314 2.42E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_12010 5ad58606c9bfbdfcc788c8d2a2c01bec 323 Gene3D G3DSA:3.40.50.720 12 317 6.4E-54 T 14-10-2018 C4901_14710 93b3081b56104258f9d8e35cbd8b1d54 74 Pfam PF05082 Rop-like 9 67 3.5E-26 T 14-10-2018 IPR007774 Putative nitrogen fixation protein C4901_14710 93b3081b56104258f9d8e35cbd8b1d54 74 PIRSF PIRSF037676 1 72 4.9E-24 T 14-10-2018 IPR007774 Putative nitrogen fixation protein C4901_14710 93b3081b56104258f9d8e35cbd8b1d54 74 Gene3D G3DSA:1.10.287.660 6 72 2.6E-26 T 14-10-2018 IPR029012 Helix hairpin bin domain superfamily C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 SUPERFAMILY SSF53850 91 293 1.61E-38 T 14-10-2018 C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 1.9E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.3E-22 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 SUPERFAMILY SSF46785 5 90 4.86E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 Gene3D G3DSA:1.10.10.10 5 93 6.2E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 Gene3D G3DSA:3.40.190.290 94 294 2.3E-49 T 14-10-2018 C4901_04415 ecf11f243064ebac1e82b786294ddaa3 296 Pfam PF03466 LysR substrate binding domain 90 293 1.6E-34 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_14760 f134810ad945835ba9a0ff1ce9b19136 282 Pfam PF13289 SIR2-like domain 102 257 1.7E-19 T 14-10-2018 IPR039444 SIR2-like domain C4901_15860 4382ddea92787a6a701c48a817c9b5fe 301 Pfam PF13460 NAD(P)H-binding 13 154 9.0E-12 T 14-10-2018 IPR016040 NAD(P)-binding domain C4901_15860 4382ddea92787a6a701c48a817c9b5fe 301 SUPERFAMILY SSF51735 6 296 1.22E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_15860 4382ddea92787a6a701c48a817c9b5fe 301 Gene3D G3DSA:3.40.50.720 8 256 9.9E-42 T 14-10-2018 C4901_04520 002a3666cd106c7b036ddf24bbf7564e 208 Gene3D G3DSA:3.40.50.150 20 203 1.2E-56 T 14-10-2018 C4901_04520 002a3666cd106c7b036ddf24bbf7564e 208 SUPERFAMILY SSF53335 23 200 1.62E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_04520 002a3666cd106c7b036ddf24bbf7564e 208 Pfam PF01728 FtsJ-like methyltransferase 24 198 1.2E-53 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 C4901_04520 002a3666cd106c7b036ddf24bbf7564e 208 PIRSF PIRSF005461 1 206 2.4E-69 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 C4901_04520 002a3666cd106c7b036ddf24bbf7564e 208 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 200 28.888 T 14-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 C4901_01905 f321478a59e6e44564adc84eb72d39d7 84 Gene3D G3DSA:3.30.70.20 2 81 4.2E-34 T 14-10-2018 C4901_01905 f321478a59e6e44564adc84eb72d39d7 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_01905 f321478a59e6e44564adc84eb72d39d7 84 SUPERFAMILY SSF54862 4 73 1.84E-19 T 14-10-2018 C4901_01905 f321478a59e6e44564adc84eb72d39d7 84 Pfam PF00037 4Fe-4S binding domain 6 25 3.5E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_13875 433cfa2318f8bdb46622e46e0cb816ff 180 SUPERFAMILY SSF53098 23 98 4.4E-12 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_13875 433cfa2318f8bdb46622e46e0cb816ff 180 Pfam PF01609 Transposase DDE domain 24 87 2.1E-9 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_12940 0dfe77f6d150486f82579b3b4ec59df1 145 SUPERFAMILY SSF51230 10 119 9.29E-29 T 14-10-2018 IPR011053 Single hybrid motif C4901_12940 0dfe77f6d150486f82579b3b4ec59df1 145 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 55 84 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 C4901_12940 0dfe77f6d150486f82579b3b4ec59df1 145 Gene3D G3DSA:2.40.50.100 7 134 4.0E-36 T 14-10-2018 C4901_12940 0dfe77f6d150486f82579b3b4ec59df1 145 Pfam PF01597 Glycine cleavage H-protein 17 131 1.5E-37 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate C4901_12940 0dfe77f6d150486f82579b3b4ec59df1 145 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 10 138 30.127 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 C4901_01940 2ba832dfa4e1d49869a25e28144e9150 442 Pfam PF09822 ABC-type uncharacterized transport system 37 255 1.7E-22 T 14-10-2018 IPR019196 ABC-type uncharacterised transport system Reactome: R-HSA-5610787|Reactome: R-HSA-5620924 C4901_01940 2ba832dfa4e1d49869a25e28144e9150 442 SUPERFAMILY SSF52317 194 390 1.69E-9 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_08460 bdedf7331dbc0992fdd6e7855b5e620f 849 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 805 846 1.2E-18 T 14-10-2018 IPR020011 Motility protein FimV, C-terminal C4901_08460 bdedf7331dbc0992fdd6e7855b5e620f 849 Gene3D G3DSA:1.20.58.2200 789 849 5.2E-20 T 14-10-2018 IPR038440 FimV, C-terminal domain superfamily C4901_08460 bdedf7331dbc0992fdd6e7855b5e620f 849 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 180 252 1.5E-18 T 14-10-2018 IPR020012 Motility protein FimV, N-terminal C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 31.541 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 7.2E-35 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 Pfam PF01197 Ribosomal protein L31 1 65 4.2E-33 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 Gene3D G3DSA:2.30.170.50 1 69 2.7E-35 T 14-10-2018 C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 SUPERFAMILY SSF143800 1 66 2.75E-28 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 PRINTS PR01249 Ribosomal protein L31 signature 31 46 5.9E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 PRINTS PR01249 Ribosomal protein L31 signature 46 64 5.9E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.9E-23 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_16760 fab0913cd9e54c1718ff7cce240b1038 69 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_00240 27d6f08824f0a599f03453bb4dc47f64 122 Pfam PF03692 Putative zinc- or iron-chelating domain 6 84 1.1E-5 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein C4901_13780 333996a948ecc32d009374987d75477d 204 SUPERFAMILY SSF103088 90 196 1.44E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily C4901_13780 333996a948ecc32d009374987d75477d 204 Pfam PF00691 OmpA family 98 192 6.8E-17 T 14-10-2018 IPR006665 OmpA-like domain C4901_13780 333996a948ecc32d009374987d75477d 204 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 26 198 27.071 T 14-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 C4901_13780 333996a948ecc32d009374987d75477d 204 PRINTS PR01021 OMPA domain signature 128 143 5.9E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C4901_13780 333996a948ecc32d009374987d75477d 204 PRINTS PR01021 OMPA domain signature 143 159 5.9E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C4901_13780 333996a948ecc32d009374987d75477d 204 PRINTS PR01021 OMPA domain signature 98 120 5.9E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C4901_13780 333996a948ecc32d009374987d75477d 204 Gene3D G3DSA:3.30.1330.60 82 199 1.2E-31 T 14-10-2018 IPR036737 OmpA-like domain superfamily C4901_05385 c85266050a51d8af0a7e4dfe5d47a48d 375 TIGRFAM TIGR03472 HpnI: hopanoid biosynthesis associated glycosyl transferase protein HpnI 11 370 1.1E-130 T 14-10-2018 IPR017835 Hopanoid biosynthesis associated glycosyltransferase, HpnI C4901_05385 c85266050a51d8af0a7e4dfe5d47a48d 375 Pfam PF13506 Glycosyl transferase family 21 98 270 4.0E-46 T 14-10-2018 IPR025993 Ceramide glucosyltransferase GO:0016757 KEGG: 00600+2.4.1.80|MetaCyc: PWY-5129|MetaCyc: PWY-7836|MetaCyc: PWY-7838|MetaCyc: PWY-7839|MetaCyc: PWY-7841|Reactome: R-HSA-1660662 C4901_05385 c85266050a51d8af0a7e4dfe5d47a48d 375 SUPERFAMILY SSF53448 43 283 2.65E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_05385 c85266050a51d8af0a7e4dfe5d47a48d 375 Gene3D G3DSA:3.90.550.10 34 254 2.4E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_08160 af7cd53e7fc9385e76dde5eb31e88d0d 294 Gene3D G3DSA:3.60.110.10 2 293 1.9E-93 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C4901_08160 af7cd53e7fc9385e76dde5eb31e88d0d 294 Pfam PF00795 Carbon-nitrogen hydrolase 6 272 1.1E-54 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 C4901_08160 af7cd53e7fc9385e76dde5eb31e88d0d 294 SUPERFAMILY SSF56317 5 290 3.14E-82 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily C4901_03205 9e15db997bf376f586c232be15a55a74 394 Pfam PF13439 Glycosyltransferase Family 4 15 183 6.4E-30 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 C4901_03205 9e15db997bf376f586c232be15a55a74 394 Gene3D G3DSA:3.40.50.2000 181 361 6.5E-72 T 14-10-2018 C4901_03205 9e15db997bf376f586c232be15a55a74 394 SUPERFAMILY SSF53756 2 379 5.3E-81 T 14-10-2018 C4901_03205 9e15db997bf376f586c232be15a55a74 394 Pfam PF00534 Glycosyl transferases group 1 195 357 1.4E-31 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 C4901_03205 9e15db997bf376f586c232be15a55a74 394 Gene3D G3DSA:3.40.50.2000 5 377 6.5E-72 T 14-10-2018 C4901_06280 df519c3c9043bab075738f1be75b09a7 531 Pfam PF07690 Major Facilitator Superfamily 43 435 5.5E-64 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_06280 df519c3c9043bab075738f1be75b09a7 531 SUPERFAMILY SSF103473 26 525 1.24E-68 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_06280 df519c3c9043bab075738f1be75b09a7 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 151 5.6E-5 T 14-10-2018 C4901_06280 df519c3c9043bab075738f1be75b09a7 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 40 64 5.6E-5 T 14-10-2018 C4901_06280 df519c3c9043bab075738f1be75b09a7 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 161 185 5.6E-5 T 14-10-2018 C4901_06280 df519c3c9043bab075738f1be75b09a7 531 PRINTS PR01036 Tetracycline resistance protein TetB signature 426 445 5.6E-5 T 14-10-2018 C4901_06280 df519c3c9043bab075738f1be75b09a7 531 Gene3D G3DSA:1.20.1720.10 37 245 1.8E-52 T 14-10-2018 C4901_06280 df519c3c9043bab075738f1be75b09a7 531 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 36 505 2.3E-126 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 C4901_06280 df519c3c9043bab075738f1be75b09a7 531 Gene3D G3DSA:1.20.1250.20 281 523 7.3E-19 T 14-10-2018 C4901_02750 38fe73761f2a6941bd2ef11c5cf02848 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 2.3E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C4901_02750 38fe73761f2a6941bd2ef11c5cf02848 344 Pfam PF01548 Transposase 6 146 1.8E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C4901_15275 38fe73761f2a6941bd2ef11c5cf02848 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 290 2.3E-25 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C4901_15275 38fe73761f2a6941bd2ef11c5cf02848 344 Pfam PF01548 Transposase 6 146 1.8E-14 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 65 9.1E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 Gene3D G3DSA:3.40.190.290 93 302 2.1E-40 T 14-10-2018 C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 2.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 2.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 2.4E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 SUPERFAMILY SSF53850 93 295 7.03E-42 T 14-10-2018 C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 Pfam PF03466 LysR substrate binding domain 92 294 3.6E-46 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 SUPERFAMILY SSF46785 4 104 3.54E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_11975 64bd2d84d6201b35f6a9b27d86044dbb 308 Gene3D G3DSA:1.10.10.10 1 86 2.3E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_10915 a8c8e329e91b504004abfa5a49084ec9 521 Gene3D G3DSA:3.40.50.300 287 519 3.6E-62 T 14-10-2018 C4901_10915 a8c8e329e91b504004abfa5a49084ec9 521 SMART SM00533 11 306 0.0079 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 C4901_10915 a8c8e329e91b504004abfa5a49084ec9 521 SMART SM00534 326 511 1.2E-51 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 C4901_10915 a8c8e329e91b504004abfa5a49084ec9 521 SUPERFAMILY SSF52540 284 514 1.69E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10915 a8c8e329e91b504004abfa5a49084ec9 521 Pfam PF00488 MutS domain V 330 514 5.8E-32 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 C4901_10915 a8c8e329e91b504004abfa5a49084ec9 521 SUPERFAMILY SSF48334 21 280 4.45E-11 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily C4901_14115 4b6b378e6e72ebf73ef69132fa5c168f 96 Pfam PF00276 Ribosomal protein L23 8 92 4.9E-26 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 C4901_14115 4b6b378e6e72ebf73ef69132fa5c168f 96 Gene3D G3DSA:3.30.70.330 1 95 4.2E-28 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily C4901_14115 4b6b378e6e72ebf73ef69132fa5c168f 96 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 6 95 19.203 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 C4901_14115 4b6b378e6e72ebf73ef69132fa5c168f 96 SUPERFAMILY SSF54189 3 92 1.15E-24 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 C4901_06490 e804d2ab074619879770b1516f498450 65 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 13 56 3.5E-10 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system C4901_16320 f816c124241572fd6ecf99611cd4ae83 165 Pfam PF04351 Pilus assembly protein, PilP 27 163 7.2E-34 T 14-10-2018 IPR007446 Pilus assembly protein PilP C4901_16320 f816c124241572fd6ecf99611cd4ae83 165 PIRSF PIRSF016481 1 165 6.1E-30 T 14-10-2018 IPR007446 Pilus assembly protein PilP C4901_16320 f816c124241572fd6ecf99611cd4ae83 165 Gene3D G3DSA:2.30.30.830 74 165 2.2E-26 T 14-10-2018 C4901_02305 aaf65f6275cc36083d13560c8b353d3f 287 Pfam PF01678 Diaminopimelate epimerase 159 271 3.5E-24 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C4901_02305 aaf65f6275cc36083d13560c8b353d3f 287 Pfam PF01678 Diaminopimelate epimerase 8 127 5.6E-32 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C4901_02305 aaf65f6275cc36083d13560c8b353d3f 287 Gene3D G3DSA:3.10.310.10 8 274 3.1E-96 T 14-10-2018 C4901_02305 aaf65f6275cc36083d13560c8b353d3f 287 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 6 278 37.42 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C4901_02305 aaf65f6275cc36083d13560c8b353d3f 287 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 7 277 2.4E-88 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 C4901_02305 aaf65f6275cc36083d13560c8b353d3f 287 SUPERFAMILY SSF54506 7 276 2.17E-49 T 14-10-2018 C4901_02305 aaf65f6275cc36083d13560c8b353d3f 287 Gene3D G3DSA:3.10.310.10 120 265 3.1E-96 T 14-10-2018 C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 SUPERFAMILY SSF48557 8 450 1.24E-91 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 Gene3D G3DSA:1.10.40.30 380 443 1.2E-140 T 14-10-2018 C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 ProSitePatterns PS00163 Fumarate lyases signature. 292 301 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 PRINTS PR00149 Fumarate lyase superfamily signature 249 276 2.4E-18 T 14-10-2018 IPR000362 Fumarate lyase family C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 2.4E-18 T 14-10-2018 IPR000362 Fumarate lyase family C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 PRINTS PR00149 Fumarate lyase superfamily signature 161 179 2.4E-18 T 14-10-2018 IPR000362 Fumarate lyase family C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 PRINTS PR00149 Fumarate lyase superfamily signature 292 308 2.4E-18 T 14-10-2018 IPR000362 Fumarate lyase family C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 Pfam PF00206 Lyase 12 310 7.3E-51 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 Gene3D G3DSA:1.20.200.10 116 444 1.2E-140 T 14-10-2018 C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 10 449 6.2E-105 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 Gene3D G3DSA:1.10.275.10 1 115 2.0E-35 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal C4901_08245 b33c60d2822cbe3cc2d2f379ffd4f2e1 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 329 443 7.9E-41 T 14-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 C4901_03615 985d1f2fe38eb1672b079c5846ac8392 193 Pfam PF12007 Protein of unknown function (DUF3501) 4 192 2.1E-69 T 14-10-2018 IPR021890 Protein of unknown function DUF3501 C4901_09690 9124ffd18590c625689c6f6b2f5133e1 342 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 296 3.0E-32 T 14-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 C4901_15220 133aee5b00c05dea08bdd0d1d883bb29 66 Pfam PF10049 Protein of unknown function (DUF2283) 2 50 2.1E-16 T 14-10-2018 IPR019270 Protein of unknown function DUF2283 C4901_12790 237e75131c97a836071626f9cd3e0f63 189 Pfam PF05036 Sporulation related domain 111 183 6.4E-8 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C4901_12790 237e75131c97a836071626f9cd3e0f63 189 Gene3D G3DSA:3.30.70.1070 107 186 1.8E-5 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C4901_12790 237e75131c97a836071626f9cd3e0f63 189 SUPERFAMILY SSF110997 111 182 1.26E-8 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C4901_16965 59a673776fd539416af59238124bf506 400 Gene3D G3DSA:3.30.950.30 5 139 6.3E-13 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily C4901_16965 59a673776fd539416af59238124bf506 400 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 311 376 1.2E-13 T 14-10-2018 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain C4901_16965 59a673776fd539416af59238124bf506 400 Pfam PF04326 Putative DNA-binding domain 17 129 1.9E-9 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 C4901_16965 59a673776fd539416af59238124bf506 400 Gene3D G3DSA:3.30.565.60 234 397 1.1E-26 T 14-10-2018 IPR038475 RecG, C-terminal domain superfamily C4901_12600 72fd8409d6ca5e0a6708084da2b9e969 296 Pfam PF00581 Rhodanese-like domain 174 251 4.5E-6 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_12600 72fd8409d6ca5e0a6708084da2b9e969 296 Gene3D G3DSA:3.40.250.10 151 256 1.7E-11 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_12600 72fd8409d6ca5e0a6708084da2b9e969 296 SMART SM00450 158 256 6.6E-6 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_12600 72fd8409d6ca5e0a6708084da2b9e969 296 SUPERFAMILY SSF52821 156 253 4.71E-13 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_06635 b9289e1aeff67c49741d9ac50f64ab04 198 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 6.9E-9 T 14-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain C4901_00075 dfc15a7e28c4a035d1cbb39c2f851ecc 110 Gene3D G3DSA:1.10.260.40 8 80 1.3E-12 T 14-10-2018 C4901_00075 dfc15a7e28c4a035d1cbb39c2f851ecc 110 SUPERFAMILY SSF47413 14 72 5.35E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_00075 dfc15a7e28c4a035d1cbb39c2f851ecc 110 Pfam PF13560 Helix-turn-helix domain 16 73 6.8E-8 T 14-10-2018 C4901_09465 170cbeb5876fa07c37b8f5cbe93f343e 399 Gene3D G3DSA:3.90.1150.10 288 385 2.7E-127 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_09465 170cbeb5876fa07c37b8f5cbe93f343e 399 SUPERFAMILY SSF53383 1 380 2.93E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_09465 170cbeb5876fa07c37b8f5cbe93f343e 399 Pfam PF00155 Aminotransferase class I and II 31 370 3.2E-57 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C4901_09465 170cbeb5876fa07c37b8f5cbe93f343e 399 Gene3D G3DSA:3.40.640.10 63 287 2.7E-127 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_02560 f0a5c53368ba0a806073a664a09cf220 173 Pfam PF10722 Putative bacterial sensory transduction regulator 15 140 1.3E-9 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN C4901_01135 ec4df99043557b3d8ee8bc100bfeeb7a 718 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 12 700 18.255 T 14-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 C4901_01135 ec4df99043557b3d8ee8bc100bfeeb7a 718 Pfam PF04453 Organic solvent tolerance protein 288 640 7.2E-78 T 14-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 C4901_01950 f4b3f3f626a1bfc36d2efe3834d8b118 313 SMART SM00382 32 215 2.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_01950 f4b3f3f626a1bfc36d2efe3834d8b118 313 Pfam PF00005 ABC transporter 24 166 1.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 C4901_01950 f4b3f3f626a1bfc36d2efe3834d8b118 313 Gene3D G3DSA:3.40.50.300 2 243 2.5E-61 T 14-10-2018 C4901_01950 f4b3f3f626a1bfc36d2efe3834d8b118 313 SUPERFAMILY SSF52540 6 229 3.41E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12555 ba55a4012468c46e3358459f2e6b6068 154 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 36 147 2.9E-21 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C4901_12555 ba55a4012468c46e3358459f2e6b6068 154 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 34 152 17.402 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 C4901_15920 26e6648188497023489322b082db8b59 466 Gene3D G3DSA:3.90.1150.10 68 440 1.2E-145 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_15920 26e6648188497023489322b082db8b59 466 SUPERFAMILY SSF53383 1 446 1.13E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_15920 26e6648188497023489322b082db8b59 466 Pfam PF02347 Glycine cleavage system P-protein 4 438 3.1E-115 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 C4901_15920 26e6648188497023489322b082db8b59 466 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 1 446 45.079 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 C4901_15920 26e6648188497023489322b082db8b59 466 Gene3D G3DSA:3.40.640.10 79 347 1.2E-145 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_15920 26e6648188497023489322b082db8b59 466 PIRSF PIRSF006815 1 447 1.1E-159 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 C4901_00395 ac7ab96fcb532c8bd207ebda5c7b698f 356 Gene3D G3DSA:3.40.50.2000 5 148 8.3E-41 T 14-10-2018 C4901_00395 ac7ab96fcb532c8bd207ebda5c7b698f 356 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 5 333 1.2E-119 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 C4901_00395 ac7ab96fcb532c8bd207ebda5c7b698f 356 SUPERFAMILY SSF53756 5 333 3.45E-88 T 14-10-2018 C4901_00395 ac7ab96fcb532c8bd207ebda5c7b698f 356 Gene3D G3DSA:3.40.50.2000 163 338 3.0E-54 T 14-10-2018 C4901_00395 ac7ab96fcb532c8bd207ebda5c7b698f 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 72 316 1.3E-55 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_01225 a8d1a5c58a4c4c2a876f018469cf0630 147 Pfam PF01850 PIN domain 4 128 2.2E-10 T 14-10-2018 IPR002716 PIN domain C4901_01225 a8d1a5c58a4c4c2a876f018469cf0630 147 Gene3D G3DSA:3.40.50.1010 2 141 6.3E-13 T 14-10-2018 C4901_01225 a8d1a5c58a4c4c2a876f018469cf0630 147 SUPERFAMILY SSF88723 1 143 6.45E-19 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_01225 a8d1a5c58a4c4c2a876f018469cf0630 147 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 139 9.499 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_02255 24e4f4b50215afbaaab6664104425178 407 SUPERFAMILY SSF52440 3 108 2.73E-29 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily C4901_02255 24e4f4b50215afbaaab6664104425178 407 Pfam PF02222 ATP-grasp domain 124 301 2.1E-50 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type C4901_02255 24e4f4b50215afbaaab6664104425178 407 SUPERFAMILY SSF51246 325 396 9.1E-18 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 C4901_02255 24e4f4b50215afbaaab6664104425178 407 Gene3D G3DSA:3.40.50.20 2 123 2.3E-49 T 14-10-2018 C4901_02255 24e4f4b50215afbaaab6664104425178 407 Gene3D G3DSA:3.30.1490.20 124 197 1.6E-28 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_02255 24e4f4b50215afbaaab6664104425178 407 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 396 2.3E-173 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 C4901_02255 24e4f4b50215afbaaab6664104425178 407 Gene3D G3DSA:3.30.470.20 198 404 4.0E-62 T 14-10-2018 C4901_02255 24e4f4b50215afbaaab6664104425178 407 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 8 397 50.783 T 14-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 C4901_02255 24e4f4b50215afbaaab6664104425178 407 SUPERFAMILY SSF56059 114 319 4.6E-55 T 14-10-2018 C4901_15255 5ce65a108ccf53b3a64eb0099e0f730a 93 SUPERFAMILY SSF47598 4 50 2.56E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_15255 5ce65a108ccf53b3a64eb0099e0f730a 93 Gene3D G3DSA:1.10.8.1250 13 92 1.2E-9 T 14-10-2018 IPR038296 Antitoxin ParD superfamily C4901_15255 5ce65a108ccf53b3a64eb0099e0f730a 93 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 56 5.9E-5 T 14-10-2018 IPR022789 Antitoxin ParD C4901_12035 d32a95f37dedcbb1e8029d067e32eb4b 239 Gene3D G3DSA:3.20.20.70 5 233 4.9E-73 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_12035 d32a95f37dedcbb1e8029d067e32eb4b 239 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 7 222 2.6E-43 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_12035 d32a95f37dedcbb1e8029d067e32eb4b 239 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 5 229 34.56 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_12035 d32a95f37dedcbb1e8029d067e32eb4b 239 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 59 72 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_12035 d32a95f37dedcbb1e8029d067e32eb4b 239 SUPERFAMILY SSF51366 6 226 4.4E-66 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C4901_12035 d32a95f37dedcbb1e8029d067e32eb4b 239 SMART SM00934 7 224 4.9E-85 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_12035 d32a95f37dedcbb1e8029d067e32eb4b 239 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 9 222 2.6E-51 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 C4901_14615 3a7fa9dda6c22c8f8e19f3857170fd96 161 SUPERFAMILY SSF52833 46 154 1.29E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_14615 3a7fa9dda6c22c8f8e19f3857170fd96 161 Gene3D G3DSA:3.40.30.10 22 155 5.4E-22 T 14-10-2018 C4901_14615 3a7fa9dda6c22c8f8e19f3857170fd96 161 Pfam PF00578 AhpC/TSA family 51 139 1.1E-11 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 C4901_12205 47f5320cfb0398a93bec26bfe1645c15 76 SUPERFAMILY SSF159127 1 70 1.7E-22 T 14-10-2018 IPR037254 HupF/HypC superfamily C4901_12205 47f5320cfb0398a93bec26bfe1645c15 76 Pfam PF01455 HupF/HypC family 1 66 2.1E-25 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C4901_12205 47f5320cfb0398a93bec26bfe1645c15 76 Gene3D G3DSA:2.40.50.970 1 73 5.8E-26 T 14-10-2018 IPR037254 HupF/HypC superfamily C4901_12205 47f5320cfb0398a93bec26bfe1645c15 76 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 69 2.4E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C4901_12205 47f5320cfb0398a93bec26bfe1645c15 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 18 34 5.2E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C4901_12205 47f5320cfb0398a93bec26bfe1645c15 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 39 55 5.2E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C4901_12205 47f5320cfb0398a93bec26bfe1645c15 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 57 69 5.2E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C4901_12205 47f5320cfb0398a93bec26bfe1645c15 76 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 5.2E-21 T 14-10-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC C4901_10795 0994829af26f013e12582d9ec59d7601 210 Pfam PF09976 Tetratricopeptide repeat-like domain 14 193 8.8E-30 T 14-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 C4901_10795 0994829af26f013e12582d9ec59d7601 210 Gene3D G3DSA:1.25.40.10 51 153 6.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_10795 0994829af26f013e12582d9ec59d7601 210 SUPERFAMILY SSF48452 63 194 2.23E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_00665 b0b286dc5fb255e5a7b0558ae2574b43 341 SUPERFAMILY SSF53800 20 338 4.45E-99 T 14-10-2018 C4901_00665 b0b286dc5fb255e5a7b0558ae2574b43 341 Hamap MF_00323 Ferrochelatase [hemH]. 20 337 35.093 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C4901_00665 b0b286dc5fb255e5a7b0558ae2574b43 341 TIGRFAM TIGR00109 hemH: ferrochelatase 19 332 2.1E-88 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C4901_00665 b0b286dc5fb255e5a7b0558ae2574b43 341 Pfam PF00762 Ferrochelatase 21 335 1.3E-102 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C4901_00665 b0b286dc5fb255e5a7b0558ae2574b43 341 ProSitePatterns PS00534 Ferrochelatase signature. 208 226 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 C4901_00665 b0b286dc5fb255e5a7b0558ae2574b43 341 Gene3D G3DSA:3.40.50.1400 21 338 9.3E-106 T 14-10-2018 C4901_00665 b0b286dc5fb255e5a7b0558ae2574b43 341 Gene3D G3DSA:3.40.50.1400 178 318 9.3E-106 T 14-10-2018 C4901_01540 db5d2238728f05d60ca374e2bafcf3f6 427 SUPERFAMILY SSF51905 10 424 6.09E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_01540 db5d2238728f05d60ca374e2bafcf3f6 427 Gene3D G3DSA:3.40.50.720 6 114 4.2E-12 T 14-10-2018 C4901_01540 db5d2238728f05d60ca374e2bafcf3f6 427 Pfam PF12831 FAD dependent oxidoreductase 11 46 7.0E-10 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal C4901_01540 db5d2238728f05d60ca374e2bafcf3f6 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.6E-5 T 14-10-2018 C4901_01540 db5d2238728f05d60ca374e2bafcf3f6 427 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 351 367 1.6E-5 T 14-10-2018 C4901_01540 db5d2238728f05d60ca374e2bafcf3f6 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.3E-5 T 14-10-2018 C4901_01540 db5d2238728f05d60ca374e2bafcf3f6 427 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 366 373 2.3E-5 T 14-10-2018 C4901_16005 e149843847de98ef80865eab1a27defb 680 Pfam PF01432 Peptidase family M3 224 672 8.0E-142 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 C4901_16005 e149843847de98ef80865eab1a27defb 680 Gene3D G3DSA:1.10.1370.10 142 605 1.2E-252 T 14-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 C4901_16005 e149843847de98ef80865eab1a27defb 680 SUPERFAMILY SSF55486 4 672 3.04E-180 T 14-10-2018 C4901_16005 e149843847de98ef80865eab1a27defb 680 Gene3D G3DSA:1.10.1370.40 15 670 1.2E-252 T 14-10-2018 C4901_12355 b1736303142e4785bf2c5dc44c83e1da 180 Pfam PF10543 ORF6N domain 22 105 3.4E-25 T 14-10-2018 IPR018873 KilA-N, DNA-binding domain C4901_02605 8d539d145a10ba8a278a9ca506880ab3 100 Pfam PF00034 Cytochrome c 17 99 1.3E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_02605 8d539d145a10ba8a278a9ca506880ab3 100 SUPERFAMILY SSF46626 14 100 1.62E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_02605 8d539d145a10ba8a278a9ca506880ab3 100 Gene3D G3DSA:1.10.760.10 17 100 4.2E-23 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_02575 7af012309fe9a17ffb0d15fee9ee552d 658 Pfam PF00361 Proton-conducting membrane transporter 122 406 1.7E-26 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02575 7af012309fe9a17ffb0d15fee9ee552d 658 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 226 250 3.8E-5 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02575 7af012309fe9a17ffb0d15fee9ee552d 658 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 3.8E-5 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02575 7af012309fe9a17ffb0d15fee9ee552d 658 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 157 181 3.8E-5 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_03600 51de73e0918f174f1a29b246fb40f5fa 139 SUPERFAMILY SSF47240 3 138 3.56E-42 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_03600 51de73e0918f174f1a29b246fb40f5fa 139 Pfam PF02915 Rubrerythrin 10 133 1.6E-29 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 C4901_03600 51de73e0918f174f1a29b246fb40f5fa 139 Gene3D G3DSA:1.20.1260.10 1 137 5.2E-55 T 14-10-2018 IPR012347 Ferritin-like C4901_01440 691d6b7c3aeaf15c2c74a97d4e294dc6 287 Pfam PF04085 rod shape-determining protein MreC 133 273 1.4E-31 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C4901_01440 691d6b7c3aeaf15c2c74a97d4e294dc6 287 Gene3D G3DSA:2.40.10.350 184 261 9.1E-29 T 14-10-2018 C4901_01440 691d6b7c3aeaf15c2c74a97d4e294dc6 287 Gene3D G3DSA:2.40.10.340 125 271 9.1E-29 T 14-10-2018 C4901_01440 691d6b7c3aeaf15c2c74a97d4e294dc6 287 PIRSF PIRSF038471 7 284 1.3E-65 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C4901_01440 691d6b7c3aeaf15c2c74a97d4e294dc6 287 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 10 277 4.3E-38 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 C4901_11420 dfdd57be3ea0cba0cd2eb442f5751a9d 144 Pfam PF05717 IS66 Orf2 like protein 9 103 4.5E-26 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_12440 daa275b4f002a249f1a5332105934c3f 155 Pfam PF01799 [2Fe-2S] binding domain 71 142 2.8E-28 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 C4901_12440 daa275b4f002a249f1a5332105934c3f 155 Gene3D G3DSA:1.10.150.120 74 154 6.3E-26 T 14-10-2018 C4901_12440 daa275b4f002a249f1a5332105934c3f 155 Gene3D G3DSA:3.10.20.30 1 73 1.8E-26 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_12440 daa275b4f002a249f1a5332105934c3f 155 SUPERFAMILY SSF47741 71 150 1.3E-30 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily C4901_12440 daa275b4f002a249f1a5332105934c3f 155 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 5 51 9.5E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 C4901_12440 daa275b4f002a249f1a5332105934c3f 155 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 C4901_12440 daa275b4f002a249f1a5332105934c3f 155 SUPERFAMILY SSF54292 2 76 3.15E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 C4901_12920 3ccf47f5afa9cbfc33329d77a273ef06 376 Gene3D G3DSA:3.20.20.70 44 298 2.3E-19 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_12920 3ccf47f5afa9cbfc33329d77a273ef06 376 Pfam PF04055 Radical SAM superfamily 62 240 4.2E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_12920 3ccf47f5afa9cbfc33329d77a273ef06 376 SUPERFAMILY SSF102114 48 285 3.53E-26 T 14-10-2018 C4901_12920 3ccf47f5afa9cbfc33329d77a273ef06 376 SMART SM00729 57 281 2.6E-17 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_15910 81399e5548119faabc2412db98d045af 486 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 1 481 55.938 T 14-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 C4901_15910 81399e5548119faabc2412db98d045af 486 Gene3D G3DSA:3.40.640.10 80 335 5.0E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_15910 81399e5548119faabc2412db98d045af 486 SUPERFAMILY SSF53383 9 479 5.22E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_15910 81399e5548119faabc2412db98d045af 486 Pfam PF02347 Glycine cleavage system P-protein 27 363 1.0E-11 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 C4901_15910 81399e5548119faabc2412db98d045af 486 Gene3D G3DSA:3.90.1150.10 336 466 3.7E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_10625 c58f56611fed571be530d032db36e315 186 Gene3D G3DSA:3.40.50.2300 17 162 1.6E-28 T 14-10-2018 C4901_10625 c58f56611fed571be530d032db36e315 186 Pfam PF00072 Response regulator receiver domain 31 142 1.4E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_10625 c58f56611fed571be530d032db36e315 186 SUPERFAMILY SSF52172 29 149 7.97E-29 T 14-10-2018 IPR011006 CheY-like superfamily C4901_10625 c58f56611fed571be530d032db36e315 186 SMART SM00448 29 142 2.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 C4901_06845 e16226992ae05a3b3fdf4ef4593542b5 345 Gene3D G3DSA:3.60.21.10 65 309 1.4E-45 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_06845 e16226992ae05a3b3fdf4ef4593542b5 345 Pfam PF00149 Calcineurin-like phosphoesterase 80 211 7.0E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C4901_06845 e16226992ae05a3b3fdf4ef4593542b5 345 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 135 140 - T 14-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 C4901_06845 e16226992ae05a3b3fdf4ef4593542b5 345 SUPERFAMILY SSF56300 68 301 6.61E-35 T 14-10-2018 C4901_12805 2aff85e36c9594a1c4638f29d2b9de6b 271 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 47 60 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C4901_12805 2aff85e36c9594a1c4638f29d2b9de6b 271 Gene3D G3DSA:3.20.20.70 1 266 1.3E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_12805 2aff85e36c9594a1c4638f29d2b9de6b 271 Pfam PF00290 Tryptophan synthase alpha chain 12 262 2.0E-79 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C4901_12805 2aff85e36c9594a1c4638f29d2b9de6b 271 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 12 262 32.941 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C4901_12805 2aff85e36c9594a1c4638f29d2b9de6b 271 SUPERFAMILY SSF51366 2 247 3.2E-82 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C4901_12805 2aff85e36c9594a1c4638f29d2b9de6b 271 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 15 259 4.8E-70 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 C4901_15495 15bcd71a66cd0e4ffa15dfc625fedbdd 108 SUPERFAMILY SSF57652 37 107 4.97E-7 T 14-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 C4901_15495 15bcd71a66cd0e4ffa15dfc625fedbdd 108 Gene3D G3DSA:4.10.490.10 38 107 8.3E-19 T 14-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Gene3D G3DSA:3.30.70.2740 669 741 3.5E-7 T 14-10-2018 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 SUPERFAMILY SSF55103 642 780 1.47E-29 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 SUPERFAMILY SSF55103 387 552 2.78E-16 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Pfam PF13183 4Fe-4S dicluster domain 813 892 5.8E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Pfam PF01565 FAD binding domain 169 314 6.7E-25 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Pfam PF02913 FAD linked oxidases, C-terminal domain 413 548 5.0E-10 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Pfam PF02913 FAD linked oxidases, C-terminal domain 679 777 1.2E-21 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Pfam PF11880 Domain of unknown function (DUF3400) 1241 1285 5.1E-21 T 14-10-2018 IPR021817 Protein of unknown function DUF3400 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 SUPERFAMILY SSF56176 130 398 3.36E-54 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Pfam PF02754 Cysteine-rich domain 1149 1238 0.0095 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Pfam PF02754 Cysteine-rich domain 1024 1112 2.8E-5 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 SUPERFAMILY SSF46548 800 908 4.97E-12 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Pfam PF12447 Protein of unknown function (DUF3683) 8 119 1.4E-46 T 14-10-2018 IPR022153 Protein of unknown function DUF3683 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 Gene3D G3DSA:3.30.465.40 128 325 3.6E-36 T 14-10-2018 C4901_07835 466a2166d2644b099c16d9abe07f35b3 1285 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 878 889 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_04640 37cdb882f0e94d7228454abd7be20023 107 Gene3D G3DSA:4.10.490.10 31 103 1.1E-18 T 14-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 C4901_04640 37cdb882f0e94d7228454abd7be20023 107 SUPERFAMILY SSF57652 27 103 1.96E-8 T 14-10-2018 IPR036369 High potential iron-sulphur protein superfamily GO:0009055|GO:0019646 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 Gene3D G3DSA:3.30.479.30 49 181 2.4E-38 T 14-10-2018 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 Pfam PF16200 C-terminal region of band_7 245 302 1.1E-16 T 14-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 PRINTS PR00721 Stomatin signature 155 173 3.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 PRINTS PR00721 Stomatin signature 174 195 3.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 PRINTS PR00721 Stomatin signature 76 97 3.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 PRINTS PR00721 Stomatin signature 111 128 3.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 PRINTS PR00721 Stomatin signature 28 50 3.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 PRINTS PR00721 Stomatin signature 131 154 3.2E-27 T 14-10-2018 IPR001972 Stomatin family GO:0016020 C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 SUPERFAMILY SSF117892 52 186 1.44E-37 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 SMART SM00244 21 179 1.2E-54 T 14-10-2018 IPR001107 Band 7 domain C4901_05285 dcb7d6b77cdc301a31ccc3658f189b9a 314 Pfam PF01145 SPFH domain / Band 7 family 25 194 4.8E-29 T 14-10-2018 IPR001107 Band 7 domain C4901_12980 dfd684cb41b76755d2bd08d509f5d548 225 SUPERFAMILY SSF46548 11 99 2.09E-15 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_12980 dfd684cb41b76755d2bd08d509f5d548 225 Pfam PF13183 4Fe-4S dicluster domain 18 80 5.5E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_12980 dfd684cb41b76755d2bd08d509f5d548 225 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 67 78 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_12980 dfd684cb41b76755d2bd08d509f5d548 225 Gene3D G3DSA:1.10.1060.10 6 100 6.8E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 C4901_16860 0620bcb8c5979281f9df87d487e7b8bc 207 PIRSF PIRSF001488 1 205 1.0E-32 T 14-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL C4901_16860 0620bcb8c5979281f9df87d487e7b8bc 207 SUPERFAMILY SSF52833 20 197 5.14E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_16860 0620bcb8c5979281f9df87d487e7b8bc 207 Gene3D G3DSA:3.40.30.10 19 206 3.4E-39 T 14-10-2018 C4901_13290 e415213c51e952385487c4bda4376e95 202 Pfam PF13673 Acetyltransferase (GNAT) domain 62 170 2.5E-9 T 14-10-2018 IPR000182 GNAT domain C4901_13290 e415213c51e952385487c4bda4376e95 202 SUPERFAMILY SSF55729 30 198 8.19E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_13290 e415213c51e952385487c4bda4376e95 202 Gene3D G3DSA:3.40.630.30 29 188 5.5E-20 T 14-10-2018 C4901_00705 b2e44bb1c7c91d3533fc9907e7048c6a 208 Gene3D G3DSA:3.40.50.850 1 208 6.5E-51 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C4901_00705 b2e44bb1c7c91d3533fc9907e7048c6a 208 Pfam PF00857 Isochorismatase family 7 180 3.4E-31 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 C4901_00705 b2e44bb1c7c91d3533fc9907e7048c6a 208 SUPERFAMILY SSF52499 4 186 1.96E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 C4901_14375 cb673b4c6a79d4d5699e0cb3406a1613 139 Gene3D G3DSA:2.20.25.10 1 32 9.6E-6 T 14-10-2018 C4901_14375 cb673b4c6a79d4d5699e0cb3406a1613 139 SUPERFAMILY SSF82784 1 137 3.27E-41 T 14-10-2018 IPR036102 OsmC/Ohr superfamily C4901_14375 cb673b4c6a79d4d5699e0cb3406a1613 139 Pfam PF02566 OsmC-like protein 34 130 1.1E-17 T 14-10-2018 IPR003718 OsmC/Ohr family C4901_14375 cb673b4c6a79d4d5699e0cb3406a1613 139 Gene3D G3DSA:3.30.300.20 39 136 9.7E-30 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_03845 e0bed0ecb81ef9fdfe9a9b445307bb97 337 TIGRFAM TIGR03182 PDH_E1_alph_y: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 6 317 1.1E-120 T 14-10-2018 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y GO:0004739|GO:0006086|GO:0043231 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-70268 C4901_03845 e0bed0ecb81ef9fdfe9a9b445307bb97 337 Pfam PF00676 Dehydrogenase E1 component 12 310 3.3E-82 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 C4901_03845 e0bed0ecb81ef9fdfe9a9b445307bb97 337 SUPERFAMILY SSF52518 6 322 9.39E-92 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold C4901_03845 e0bed0ecb81ef9fdfe9a9b445307bb97 337 Gene3D G3DSA:3.40.50.970 1 328 9.8E-116 T 14-10-2018 C4901_09175 7cdcc898aaf1f1b2dfb6dc8efa762943 69 Pfam PF16277 Domain of unknown function (DUF4926) 4 57 5.6E-17 T 14-10-2018 IPR032568 Protein of unknown function DUF4926 C4901_04390 b31df6cb544cac3074e04a83536b6828 283 SUPERFAMILY SSF51430 4 261 2.75E-84 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C4901_04390 b31df6cb544cac3074e04a83536b6828 283 Pfam PF00248 Aldo/keto reductase family 23 257 2.8E-46 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain C4901_04390 b31df6cb544cac3074e04a83536b6828 283 PIRSF PIRSF000097 1 115 1.6E-36 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_04390 b31df6cb544cac3074e04a83536b6828 283 PIRSF PIRSF000097 110 273 7.4E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_04390 b31df6cb544cac3074e04a83536b6828 283 Gene3D G3DSA:3.20.20.100 1 283 2.2E-114 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C4901_04390 b31df6cb544cac3074e04a83536b6828 283 PRINTS PR00069 Aldo-keto reductase signature 154 183 1.0E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_04390 b31df6cb544cac3074e04a83536b6828 283 PRINTS PR00069 Aldo-keto reductase signature 120 137 1.0E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_04390 b31df6cb544cac3074e04a83536b6828 283 PRINTS PR00069 Aldo-keto reductase signature 35 59 1.0E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_04390 b31df6cb544cac3074e04a83536b6828 283 PRINTS PR00069 Aldo-keto reductase signature 91 109 1.0E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_04390 b31df6cb544cac3074e04a83536b6828 283 PRINTS PR00069 Aldo-keto reductase signature 193 217 1.0E-39 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 C4901_04390 b31df6cb544cac3074e04a83536b6828 283 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 Gene3D G3DSA:3.40.50.10490 29 515 8.4E-217 T 14-10-2018 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 Gene3D G3DSA:3.40.50.10490 114 308 8.4E-217 T 14-10-2018 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 506 523 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 Pfam PF00342 Phosphoglucose isomerase 68 550 2.3E-201 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 Gene3D G3DSA:1.10.1390.10 516 557 3.4E-16 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 SUPERFAMILY SSF53697 25 557 6.43E-199 T 14-10-2018 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 62 533 39.261 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 278 296 3.5E-50 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 474 492 3.5E-50 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 355 376 3.5E-50 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 506 519 3.5E-50 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 492 506 3.5E-50 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 166 185 3.5E-50 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_05925 0512cbb2f5cc117ef71a1b728a752024 560 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 282 295 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 C4901_07710 2583b35f7b4a788be2e57dd389bd7edd 452 Pfam PF02646 RmuC family 132 423 1.5E-90 T 14-10-2018 IPR003798 DNA recombination RmuC C4901_01855 18a88579a42a8db081ba5b09fd75838c 284 Pfam PF03743 Bacterial conjugation TrbI-like protein 121 260 2.3E-7 T 14-10-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI C4901_00545 165081c302692b6da82f87dddd1c6f18 177 SUPERFAMILY SSF52833 7 171 1.81E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_00545 165081c302692b6da82f87dddd1c6f18 177 ProSitePatterns PS00194 Thioredoxin family active site. 64 82 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C4901_00545 165081c302692b6da82f87dddd1c6f18 177 Pfam PF08534 Redoxin 43 164 1.9E-16 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 C4901_00545 165081c302692b6da82f87dddd1c6f18 177 Gene3D G3DSA:3.40.30.10 30 177 2.7E-30 T 14-10-2018 C4901_10655 18e85731a870331c45aa185b7296ff28 163 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 91 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 C4901_10655 18e85731a870331c45aa185b7296ff28 163 Gene3D G3DSA:3.40.140.10 1 158 7.3E-57 T 14-10-2018 C4901_10655 18e85731a870331c45aa185b7296ff28 163 Pfam PF14437 MafB19-like deaminase 4 150 2.6E-26 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 C4901_10655 18e85731a870331c45aa185b7296ff28 163 SUPERFAMILY SSF53927 3 150 1.47E-49 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 C4901_10655 18e85731a870331c45aa185b7296ff28 163 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 9 150 45.405 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 C4901_03155 cc44c7058ae0292bb15643f2a2c1b220 216 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 3 209 34.918 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C4901_03155 cc44c7058ae0292bb15643f2a2c1b220 216 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 4 208 1.1E-62 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C4901_03155 cc44c7058ae0292bb15643f2a2c1b220 216 Gene3D G3DSA:3.40.50.880 1 215 1.2E-70 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_03155 cc44c7058ae0292bb15643f2a2c1b220 216 PIRSF PIRSF000495 2 212 1.1E-65 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 C4901_03155 cc44c7058ae0292bb15643f2a2c1b220 216 SUPERFAMILY SSF52317 2 209 2.75E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_03155 cc44c7058ae0292bb15643f2a2c1b220 216 Pfam PF00117 Glutamine amidotransferase class-I 6 206 1.2E-16 T 14-10-2018 IPR017926 Glutamine amidotransferase C4901_03210 08049afdbebe37d44fe805136b1c3c00 264 Gene3D G3DSA:3.60.21.10 7 252 2.8E-17 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_03210 08049afdbebe37d44fe805136b1c3c00 264 SUPERFAMILY SSF56300 7 253 1.25E-29 T 14-10-2018 C4901_03210 08049afdbebe37d44fe805136b1c3c00 264 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 9 228 2.1E-10 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 C4901_09890 917f8fc7b441feff419e896a998bf236 125 Pfam PF02635 DsrE/DsrF-like family 10 100 3.5E-8 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_09890 917f8fc7b441feff419e896a998bf236 125 Gene3D G3DSA:3.40.1260.10 2 125 1.8E-25 T 14-10-2018 IPR027396 DsrEFH-like C4901_09890 917f8fc7b441feff419e896a998bf236 125 SUPERFAMILY SSF75169 9 125 1.58E-13 T 14-10-2018 IPR027396 DsrEFH-like C4901_15065 83e74736cfa5cebee921781506fd4aca 185 Pfam PF02613 Nitrate reductase delta subunit 30 163 2.5E-6 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone C4901_15065 83e74736cfa5cebee921781506fd4aca 185 SUPERFAMILY SSF89155 10 167 9.29E-20 T 14-10-2018 IPR036411 TorD-like superfamily C4901_15065 83e74736cfa5cebee921781506fd4aca 185 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 15 164 6.7E-26 T 14-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 C4901_08515 fdf56af258e24f4e8ea275ea42868d6d 74 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 47 5.1E-12 T 14-10-2018 IPR022453 Zinc finger, MqsA-type C4901_08515 fdf56af258e24f4e8ea275ea42868d6d 74 Gene3D G3DSA:1.20.58.720 1 70 2.3E-5 T 14-10-2018 C4901_00875 78e6679ed841f675d11c2fdac0aaa14d 390 SUPERFAMILY SSF51261 185 387 3.24E-38 T 14-10-2018 IPR011055 Duplicated hybrid motif C4901_00875 78e6679ed841f675d11c2fdac0aaa14d 390 Gene3D G3DSA:2.70.70.10 256 388 1.0E-26 T 14-10-2018 IPR011055 Duplicated hybrid motif C4901_00875 78e6679ed841f675d11c2fdac0aaa14d 390 Pfam PF01551 Peptidase family M23 290 383 4.5E-21 T 14-10-2018 IPR016047 Peptidase M23 C4901_00520 f8d39015849ef705476f7d6d93e26f81 209 TIGRFAM TIGR02098 MJ0042_CXXC: MJ0042 family finger-like domain 4 38 2.9E-11 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative C4901_00520 f8d39015849ef705476f7d6d93e26f81 209 Pfam PF11906 Protein of unknown function (DUF3426) 65 196 5.5E-20 T 14-10-2018 IPR021834 Protein of unknown function DUF3426 C4901_00520 f8d39015849ef705476f7d6d93e26f81 209 Pfam PF13719 zinc-ribbon domain 3 38 1.6E-12 T 14-10-2018 IPR011723 Zinc finger/thioredoxin putative C4901_01980 9eef191cb5845879ee08900e02743d67 71 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 47 7.7E-20 T 14-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB C4901_13245 5f54fae8a57e3a52a36d5a8a57d32ef5 404 SUPERFAMILY SSF56300 151 366 1.83E-36 T 14-10-2018 C4901_13245 5f54fae8a57e3a52a36d5a8a57d32ef5 404 Gene3D G3DSA:3.60.21.10 149 335 7.9E-17 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_13245 5f54fae8a57e3a52a36d5a8a57d32ef5 404 Pfam PF00149 Calcineurin-like phosphoesterase 151 310 1.2E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C4901_02705 8176fddae88a0ba0bef1be18ef8f7100 195 SUPERFAMILY SSF56235 1 187 1.61E-22 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_02705 8176fddae88a0ba0bef1be18ef8f7100 195 Pfam PF00227 Proteasome subunit 2 182 4.4E-6 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 C4901_02705 8176fddae88a0ba0bef1be18ef8f7100 195 Gene3D G3DSA:3.60.20.10 2 188 1.4E-39 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal C4901_01730 d97c0372897e1116be04577ae257cdc4 162 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_01730 d97c0372897e1116be04577ae257cdc4 162 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 1.7E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_01730 d97c0372897e1116be04577ae257cdc4 162 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 3.6E-8 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_01730 d97c0372897e1116be04577ae257cdc4 162 SUPERFAMILY SSF54523 8 134 4.24E-15 T 14-10-2018 C4901_01730 d97c0372897e1116be04577ae257cdc4 162 Gene3D G3DSA:3.30.700.10 8 161 2.3E-17 T 14-10-2018 C4901_07920 f9a35d15b7a265a8436d34968cbc899f 150 Pfam PF00582 Universal stress protein family 4 147 4.2E-33 T 14-10-2018 IPR006016 UspA C4901_07920 f9a35d15b7a265a8436d34968cbc899f 150 Gene3D G3DSA:3.40.50.620 1 148 8.4E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_07920 f9a35d15b7a265a8436d34968cbc899f 150 SUPERFAMILY SSF52402 4 147 2.76E-36 T 14-10-2018 C4901_07920 f9a35d15b7a265a8436d34968cbc899f 150 PRINTS PR01438 Universal stress protein signature 4 22 9.9E-21 T 14-10-2018 IPR006015 Universal stress protein A C4901_07920 f9a35d15b7a265a8436d34968cbc899f 150 PRINTS PR01438 Universal stress protein signature 107 119 9.9E-21 T 14-10-2018 IPR006015 Universal stress protein A C4901_07920 f9a35d15b7a265a8436d34968cbc899f 150 PRINTS PR01438 Universal stress protein signature 125 147 9.9E-21 T 14-10-2018 IPR006015 Universal stress protein A C4901_04795 7bed3b64289562d2fcbb4e7854df77c9 616 Gene3D G3DSA:1.50.10.10 227 604 4.5E-83 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 C4901_04795 7bed3b64289562d2fcbb4e7854df77c9 616 SUPERFAMILY SSF48208 204 595 1.06E-102 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 C4901_04795 7bed3b64289562d2fcbb4e7854df77c9 616 Pfam PF00723 Glycosyl hydrolases family 15 228 538 1.0E-53 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 C4901_06715 91723a833230879fcccb42b694b9cf60 172 Gene3D G3DSA:3.90.79.10 7 171 4.8E-29 T 14-10-2018 C4901_06715 91723a833230879fcccb42b694b9cf60 172 SUPERFAMILY SSF55811 10 168 8.67E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_06715 91723a833230879fcccb42b694b9cf60 172 Pfam PF00293 NUDIX domain 35 145 8.9E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_06715 91723a833230879fcccb42b694b9cf60 172 ProSitePatterns PS00893 Nudix box signature. 67 88 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C4901_03870 2a0be5aeca04a007ec700d1a632de8af 145 Gene3D G3DSA:3.40.630.30 1 143 1.1E-28 T 14-10-2018 C4901_03870 2a0be5aeca04a007ec700d1a632de8af 145 SUPERFAMILY SSF55729 1 138 4.05E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_03870 2a0be5aeca04a007ec700d1a632de8af 145 Pfam PF00583 Acetyltransferase (GNAT) family 11 122 7.9E-14 T 14-10-2018 IPR000182 GNAT domain C4901_08105 ba42aa19ec25507107d8348daa0a8661 381 SUPERFAMILY SSF51569 1 359 4.67E-71 T 14-10-2018 C4901_08105 ba42aa19ec25507107d8348daa0a8661 381 Gene3D G3DSA:3.30.70.1140 1 83 7.8E-8 T 14-10-2018 C4901_08105 ba42aa19ec25507107d8348daa0a8661 381 Pfam PF00793 DAHP synthetase I family 94 348 4.5E-42 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 C4901_08105 ba42aa19ec25507107d8348daa0a8661 381 Gene3D G3DSA:3.20.20.70 84 357 7.1E-69 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_11215 baea03d8b9845fd8dba8bedd48e39b73 243 Gene3D G3DSA:3.40.50.1010 107 205 1.4E-10 T 14-10-2018 C4901_11215 baea03d8b9845fd8dba8bedd48e39b73 243 Pfam PF01936 NYN domain 5 199 2.6E-11 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type C4901_14240 27e8753b96665ed5e27a0665e212167d 392 Pfam PF13191 AAA ATPase domain 19 204 4.2E-16 T 14-10-2018 C4901_14240 27e8753b96665ed5e27a0665e212167d 392 Gene3D G3DSA:3.40.50.300 13 223 1.9E-13 T 14-10-2018 C4901_14240 27e8753b96665ed5e27a0665e212167d 392 SUPERFAMILY SSF52540 6 286 2.97E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_13020 3cef9c41c61c702016727bfa86553a85 176 PIRSF PIRSF010312 18 176 7.3E-32 T 14-10-2018 IPR016568 Sulphur oxidation, SoxY C4901_13020 3cef9c41c61c702016727bfa86553a85 176 Gene3D G3DSA:2.60.40.2470 55 176 1.9E-32 T 14-10-2018 IPR038162 Ig-like SoxY domain superfamily C4901_13020 3cef9c41c61c702016727bfa86553a85 176 Pfam PF13501 Sulfur oxidation protein SoxY 73 174 2.7E-24 T 14-10-2018 IPR032711 Ig-like SoxY domain C4901_12490 1cf4037e1bcc0132a03deae31b8ba5e6 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 44 61 7.7E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12490 1cf4037e1bcc0132a03deae31b8ba5e6 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 120 140 7.7E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12490 1cf4037e1bcc0132a03deae31b8ba5e6 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 203 227 7.7E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12490 1cf4037e1bcc0132a03deae31b8ba5e6 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 155 181 7.7E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12490 1cf4037e1bcc0132a03deae31b8ba5e6 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 99 119 7.7E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12490 1cf4037e1bcc0132a03deae31b8ba5e6 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 61 81 7.7E-55 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12490 1cf4037e1bcc0132a03deae31b8ba5e6 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 44 227 1.8E-76 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 C4901_12490 1cf4037e1bcc0132a03deae31b8ba5e6 245 Pfam PF01578 Cytochrome C assembly protein 27 183 1.6E-30 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 C4901_00740 fcc40e4f0ad60b2e0292f29bf25847dc 197 Pfam PF16925 Bacterial transcriptional repressor C-terminal 81 180 4.3E-17 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal C4901_00740 fcc40e4f0ad60b2e0292f29bf25847dc 197 Gene3D G3DSA:1.10.357.10 7 195 2.4E-49 T 14-10-2018 C4901_00740 fcc40e4f0ad60b2e0292f29bf25847dc 197 SUPERFAMILY SSF46689 4 76 9.23E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_00740 fcc40e4f0ad60b2e0292f29bf25847dc 197 SUPERFAMILY SSF48498 79 192 9.89E-22 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily C4901_00740 fcc40e4f0ad60b2e0292f29bf25847dc 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 1.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 C4901_04310 2023b7df74408ac8f0cdf9af214f2ee2 266 Gene3D G3DSA:1.10.600.10 2 263 1.4E-86 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C4901_04310 2023b7df74408ac8f0cdf9af214f2ee2 266 Pfam PF00348 Polyprenyl synthetase 8 238 6.5E-52 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 C4901_04310 2023b7df74408ac8f0cdf9af214f2ee2 266 SUPERFAMILY SSF48576 7 258 1.98E-75 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C4901_04310 2023b7df74408ac8f0cdf9af214f2ee2 266 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 185 197 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C4901_04310 2023b7df74408ac8f0cdf9af214f2ee2 266 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 57 73 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C4901_09665 afe724a255b3ae40a7bf2871b5a3a9e9 402 Pfam PF12323 Helix-turn-helix domain 1 46 2.0E-16 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain C4901_09665 afe724a255b3ae40a7bf2871b5a3a9e9 402 Pfam PF01385 Probable transposase 178 288 1.2E-18 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C4901_09665 afe724a255b3ae40a7bf2871b5a3a9e9 402 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 257 344 6.3E-9 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_09665 afe724a255b3ae40a7bf2871b5a3a9e9 402 Pfam PF07282 Putative transposase DNA-binding domain 317 386 9.8E-22 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_01295 29ff6818315272b0d9e787906678b78d 335 Pfam PF01136 Peptidase family U32 81 334 1.1E-56 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C4901_04825 3a96d90269eb607e6ed7d89ec89453ff 298 SUPERFAMILY SSF103481 180 285 9.02E-11 T 14-10-2018 C4901_04825 3a96d90269eb607e6ed7d89ec89453ff 298 SUPERFAMILY SSF103481 45 136 9.81E-6 T 14-10-2018 C4901_04825 3a96d90269eb607e6ed7d89ec89453ff 298 Pfam PF00892 EamA-like transporter family 145 280 1.3E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_11550 5112cc6490dfc91c08c5de0f90f5dca1 241 SUPERFAMILY SSF52540 13 110 4.87E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11550 5112cc6490dfc91c08c5de0f90f5dca1 241 Gene3D G3DSA:3.40.50.300 9 158 1.5E-5 T 14-10-2018 C4901_09115 c5856471632a28a6f0c1f8b014c50982 115 Pfam PF14190 Domain of unknown function (DUF4313) 29 103 7.9E-7 T 14-10-2018 IPR025462 Protein of unknown function DUF4313 C4901_00045 cfe0a02f08cb908bee3f09f5469338aa 66 Pfam PF02597 ThiS family 4 66 3.6E-13 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 C4901_00045 cfe0a02f08cb908bee3f09f5469338aa 66 Gene3D G3DSA:3.10.20.30 2 66 2.1E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_00045 cfe0a02f08cb908bee3f09f5469338aa 66 SUPERFAMILY SSF54285 2 65 1.96E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C4901_00045 cfe0a02f08cb908bee3f09f5469338aa 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 3.8E-21 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis C4901_02075 fee1a698dcc8d3be49eb158763df98e3 94 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 5 91 9.987 T 14-10-2018 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 C4901_02075 fee1a698dcc8d3be49eb158763df98e3 94 Gene3D G3DSA:3.30.70.240 2 87 1.0E-11 T 14-10-2018 C4901_02075 fee1a698dcc8d3be49eb158763df98e3 94 SUPERFAMILY SSF143430 5 75 6.67E-13 T 14-10-2018 C4901_02075 fee1a698dcc8d3be49eb158763df98e3 94 Pfam PF09827 CRISPR associated protein Cas2 6 68 8.7E-6 T 14-10-2018 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 C4901_12570 31e302d8ead56eb6b3a56acb828d35fc 140 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 6 135 2.2E-38 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 C4901_12570 31e302d8ead56eb6b3a56acb828d35fc 140 SUPERFAMILY SSF55729 3 138 2.1E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_12570 31e302d8ead56eb6b3a56acb828d35fc 140 Pfam PF00583 Acetyltransferase (GNAT) family 26 114 4.4E-16 T 14-10-2018 IPR000182 GNAT domain C4901_12570 31e302d8ead56eb6b3a56acb828d35fc 140 Gene3D G3DSA:3.40.630.30 1 140 7.7E-42 T 14-10-2018 C4901_03190 9b0dd1c9f82cfbe8a61061a936df8ddb 148 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 4.8E-11 T 14-10-2018 C4901_03190 9b0dd1c9f82cfbe8a61061a936df8ddb 148 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 4.8E-11 T 14-10-2018 C4901_03190 9b0dd1c9f82cfbe8a61061a936df8ddb 148 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 4.8E-11 T 14-10-2018 C4901_03190 9b0dd1c9f82cfbe8a61061a936df8ddb 148 Pfam PF02416 mttA/Hcf106 family 5 35 1.2E-7 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 C4901_03930 66772e3ac8f35e1677f462332d1f8947 300 Pfam PF01385 Probable transposase 90 210 2.9E-14 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C4901_06405 f54092186b7bae5f08c2048f8a5effc1 191 Gene3D G3DSA:3.10.290.30 5 184 3.5E-56 T 14-10-2018 IPR024047 MM3350-like superfamily C4901_06405 f54092186b7bae5f08c2048f8a5effc1 191 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 10 180 2.6E-56 T 14-10-2018 IPR012912 Plasmid pRiA4b, Orf3 C4901_06405 f54092186b7bae5f08c2048f8a5effc1 191 SUPERFAMILY SSF159941 10 183 2.35E-56 T 14-10-2018 IPR024047 MM3350-like superfamily C4901_05010 38760ecadfb9fd04172a01e62f6412c9 77 Pfam PF11127 Protein of unknown function (DUF2892) 5 64 3.9E-12 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 C4901_05200 a5c3c65614ea020ae2b96bc8ab8441f4 78 SUPERFAMILY SSF56349 4 69 7.06E-13 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_05200 a5c3c65614ea020ae2b96bc8ab8441f4 78 Pfam PF00589 Phage integrase family 4 54 4.8E-8 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_05200 a5c3c65614ea020ae2b96bc8ab8441f4 78 Gene3D G3DSA:1.10.443.10 1 74 1.0E-11 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_13110 4f8447550ee431bb39d498d0daf38128 26 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 4 26 1.0E-7 T 14-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 C4901_13110 4f8447550ee431bb39d498d0daf38128 26 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 4 26 4.6E-8 T 14-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 C4901_12230 424b7e12e463b42bc811375aab1b29c4 176 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 22 171 5.0E-36 T 14-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE C4901_12230 424b7e12e463b42bc811375aab1b29c4 176 Gene3D G3DSA:3.30.1460.40 13 143 5.2E-32 T 14-10-2018 IPR038530 [NiFe]-hydrogenase assembly, chaperone, HybE superfamily C4901_12230 424b7e12e463b42bc811375aab1b29c4 176 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 24 170 2.1E-34 T 14-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE C4901_12230 424b7e12e463b42bc811375aab1b29c4 176 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 21 144 4.0E-15 T 14-10-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE C4901_11190 2c73084dd99f3681a60a70608092165b 74 Pfam PF09720 Putative addiction module component 13 65 2.0E-12 T 14-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module C4901_11190 2c73084dd99f3681a60a70608092165b 74 TIGRFAM TIGR02574 stabl_TIGR02574: putative addiction module component, TIGR02574 family 11 70 1.4E-9 T 14-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module C4901_13755 2eb9f444f66ee6c429b570ef6f1ad561 41 Pfam PF01610 Transposase 1 25 7.7E-5 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_06305 5193860f2b3b6bdef96f630ff2bb8f54 291 SUPERFAMILY SSF47240 1 287 3.69E-80 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_06305 5193860f2b3b6bdef96f630ff2bb8f54 291 Gene3D G3DSA:1.20.1260.10 1 197 3.7E-67 T 14-10-2018 IPR012347 Ferritin-like C4901_06305 5193860f2b3b6bdef96f630ff2bb8f54 291 Pfam PF05067 Manganese containing catalase 1 285 3.6E-81 T 14-10-2018 IPR007760 Manganese catalase C4901_02845 0fd1f4e29fea772c5eecd0f09d7c9238 419 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 7 418 40.965 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C4901_02845 0fd1f4e29fea772c5eecd0f09d7c9238 419 PIRSF PIRSF000151 1 419 1.5E-169 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 C4901_02845 0fd1f4e29fea772c5eecd0f09d7c9238 419 SUPERFAMILY SSF53720 7 418 7.46E-117 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 C4901_02845 0fd1f4e29fea772c5eecd0f09d7c9238 419 Gene3D G3DSA:3.40.605.10 15 415 1.2E-158 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 C4901_02845 0fd1f4e29fea772c5eecd0f09d7c9238 419 Pfam PF00171 Aldehyde dehydrogenase family 10 285 3.9E-15 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 C4901_02845 0fd1f4e29fea772c5eecd0f09d7c9238 419 Gene3D G3DSA:3.40.309.10 228 376 1.2E-158 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 C4901_02845 0fd1f4e29fea772c5eecd0f09d7c9238 419 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 325 346 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C4901_02845 0fd1f4e29fea772c5eecd0f09d7c9238 419 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 15 408 9.5E-145 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 C4901_09945 e04d232c3e5759fe92ea8e8526ba9157 498 Pfam PF04293 SpoVR like protein 13 443 2.2E-152 T 14-10-2018 IPR007390 Sporulation stage V, protein R C4901_04490 43cc621ddd1f67f32583ab598ad1adb6 165 SUPERFAMILY SSF75169 49 164 1.06E-19 T 14-10-2018 IPR027396 DsrEFH-like C4901_04490 43cc621ddd1f67f32583ab598ad1adb6 165 Pfam PF02635 DsrE/DsrF-like family 58 164 2.3E-11 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_04490 43cc621ddd1f67f32583ab598ad1adb6 165 Gene3D G3DSA:3.40.1260.10 47 164 1.6E-22 T 14-10-2018 IPR027396 DsrEFH-like C4901_03935 3b007848bcb247280bb9c2c714b35538 78 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 2 49 2.0E-7 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_03935 3b007848bcb247280bb9c2c714b35538 78 SUPERFAMILY SSF143120 3 41 5.75E-7 T 14-10-2018 IPR036165 YefM-like superfamily C4901_03935 3b007848bcb247280bb9c2c714b35538 78 Gene3D G3DSA:3.40.1620.10 2 38 4.1E-6 T 14-10-2018 C4901_03935 3b007848bcb247280bb9c2c714b35538 78 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 39 7.6E-6 T 14-10-2018 C4901_02875 a562bd2f4bc25e28e26e6103fbcfa7f2 1270 Pfam PF13116 Protein of unknown function 526 795 5.8E-27 T 14-10-2018 IPR025263 Domain of unknown function DUF3971 C4901_02875 a562bd2f4bc25e28e26e6103fbcfa7f2 1270 Pfam PF13502 AsmA-like C-terminal region 1021 1261 9.5E-46 T 14-10-2018 IPR032712 AsmA-like, C-terminal C4901_02875 a562bd2f4bc25e28e26e6103fbcfa7f2 1270 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 41 1265 2.0E-160 T 14-10-2018 IPR011836 Conserved hypothetical protein CHP02099 C4901_05280 81afc6ab178eae9c67c7b0ab6ec34f2f 271 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 6 258 18.528 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C4901_05280 81afc6ab178eae9c67c7b0ab6ec34f2f 271 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 256 4.2E-73 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C4901_05280 81afc6ab178eae9c67c7b0ab6ec34f2f 271 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 9 253 8.9E-72 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 C4901_03500 25d6b1e4cdf2c25b7b78344ddd8b502d 452 Pfam PF02661 Fic/DOC family 217 310 1.7E-11 T 14-10-2018 IPR003812 Fido domain C4901_03500 25d6b1e4cdf2c25b7b78344ddd8b502d 452 Gene3D G3DSA:1.10.3290.10 138 363 6.6E-37 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_03500 25d6b1e4cdf2c25b7b78344ddd8b502d 452 SUPERFAMILY SSF140931 191 367 1.27E-20 T 14-10-2018 IPR036597 Fido-like domain superfamily C4901_02475 4b9fc8effe832e9a0a9033ad8c2f460a 47 Gene3D G3DSA:3.30.2310.20 1 47 2.8E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_02475 4b9fc8effe832e9a0a9033ad8c2f460a 47 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 2 47 6.7E-13 T 14-10-2018 IPR007711 Toxin HigB-1 C4901_02475 4b9fc8effe832e9a0a9033ad8c2f460a 47 SUPERFAMILY SSF143011 3 47 6.8E-11 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_09705 b8cfa04d875ac492355ead05dd82ef88 81 Gene3D G3DSA:3.10.20.30 3 81 8.2E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily C4901_09705 b8cfa04d875ac492355ead05dd82ef88 81 SUPERFAMILY SSF54285 4 81 2.43E-14 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp C4901_09705 b8cfa04d875ac492355ead05dd82ef88 81 Pfam PF02597 ThiS family 6 81 1.3E-11 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 C4901_14385 a41aef64d927b98d5de8da61b81d4f3f 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 65 8.4E-16 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_14385 a41aef64d927b98d5de8da61b81d4f3f 342 Gene3D G3DSA:3.40.1030.10 72 341 4.1E-103 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_14385 a41aef64d927b98d5de8da61b81d4f3f 342 Gene3D G3DSA:1.20.970.10 1 70 7.8E-22 T 14-10-2018 C4901_14385 a41aef64d927b98d5de8da61b81d4f3f 342 SUPERFAMILY SSF52418 76 340 7.06E-90 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_14385 a41aef64d927b98d5de8da61b81d4f3f 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 9 336 3.5E-121 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 C4901_14385 a41aef64d927b98d5de8da61b81d4f3f 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 6 337 37.307 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 C4901_14385 a41aef64d927b98d5de8da61b81d4f3f 342 Pfam PF00591 Glycosyl transferase family, a/b domain 77 326 8.3E-94 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_14385 a41aef64d927b98d5de8da61b81d4f3f 342 SUPERFAMILY SSF47648 6 69 4.06E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 C4901_03720 3fabdff33c9d5f11e5af7229e26eeaff 114 SUPERFAMILY SSF103088 8 110 1.83E-24 T 14-10-2018 IPR036737 OmpA-like domain superfamily C4901_03720 3fabdff33c9d5f11e5af7229e26eeaff 114 PRINTS PR01021 OMPA domain signature 35 50 3.7E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C4901_03720 3fabdff33c9d5f11e5af7229e26eeaff 114 PRINTS PR01021 OMPA domain signature 50 66 3.7E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C4901_03720 3fabdff33c9d5f11e5af7229e26eeaff 114 PRINTS PR01021 OMPA domain signature 5 27 3.7E-9 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 C4901_03720 3fabdff33c9d5f11e5af7229e26eeaff 114 Gene3D G3DSA:3.30.1330.60 2 113 1.8E-25 T 14-10-2018 IPR036737 OmpA-like domain superfamily C4901_03720 3fabdff33c9d5f11e5af7229e26eeaff 114 Pfam PF00691 OmpA family 8 94 1.2E-20 T 14-10-2018 IPR006665 OmpA-like domain C4901_02185 6acda76028a33959a7dfd3c0705ecc55 170 Gene3D G3DSA:3.40.1260.10 40 170 3.8E-10 T 14-10-2018 IPR027396 DsrEFH-like C4901_02185 6acda76028a33959a7dfd3c0705ecc55 170 SUPERFAMILY SSF75169 52 168 2.77E-11 T 14-10-2018 IPR027396 DsrEFH-like C4901_02125 057a486603409eab9dc38d4983674e2f 176 Gene3D G3DSA:1.10.10.60 89 127 6.3E-7 T 14-10-2018 C4901_02125 057a486603409eab9dc38d4983674e2f 176 Pfam PF13384 Homeodomain-like domain 101 132 7.0E-7 T 14-10-2018 C4901_02125 057a486603409eab9dc38d4983674e2f 176 SUPERFAMILY SSF46689 92 176 2.2E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 C4901_05455 c8014898102441a466aca65c9b5d5a53 156 Pfam PF07681 DoxX 6 85 6.4E-8 T 14-10-2018 IPR032808 DoxX family C4901_06975 a479c5dff843f717be26e25ea33b0aa0 515 Gene3D G3DSA:2.60.40.10 398 503 4.0E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold C4901_06975 a479c5dff843f717be26e25ea33b0aa0 515 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 27 496 1.2E-141 T 14-10-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 C4901_06975 a479c5dff843f717be26e25ea33b0aa0 515 Gene3D G3DSA:2.70.98.10 26 397 1.2E-126 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 C4901_06975 a479c5dff843f717be26e25ea33b0aa0 515 PIRSF PIRSF006281 9 502 7.6E-133 T 14-10-2018 IPR014438 Glucan biosynthesis protein MdoG/MdoD C4901_06975 a479c5dff843f717be26e25ea33b0aa0 515 SUPERFAMILY SSF74650 27 396 1.88E-113 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 C4901_06975 a479c5dff843f717be26e25ea33b0aa0 515 SUPERFAMILY SSF81296 400 498 3.36E-12 T 14-10-2018 IPR014756 Immunoglobulin E-set C4901_00475 14851fc5bc8ed45f688d95db5b7619e4 307 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 14 269 5.4E-43 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system C4901_01050 0c4a53efef2442d882dc6407e1a5a9f0 174 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 163 2.2E-17 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 C4901_01050 0c4a53efef2442d882dc6407e1a5a9f0 174 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 159 4.0E-34 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 C4901_01050 0c4a53efef2442d882dc6407e1a5a9f0 174 SUPERFAMILY SSF56300 1 160 2.69E-28 T 14-10-2018 C4901_01050 0c4a53efef2442d882dc6407e1a5a9f0 174 Gene3D G3DSA:3.60.21.10 1 166 1.5E-31 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_09420 6a64ee59b99f5c537b5baccecebb94d6 338 Gene3D G3DSA:3.20.20.300 3 338 3.4E-111 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 C4901_09420 6a64ee59b99f5c537b5baccecebb94d6 338 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 5 338 48.877 T 14-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 C4901_09420 6a64ee59b99f5c537b5baccecebb94d6 338 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 10 296 9.4E-73 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 C4901_09420 6a64ee59b99f5c537b5baccecebb94d6 338 SUPERFAMILY SSF51445 5 299 8.0E-83 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_02345 1278201341a45b7e83dd6042396f187a 149 Gene3D G3DSA:2.60.40.790 7 149 4.2E-37 T 14-10-2018 IPR008978 HSP20-like chaperone C4901_02345 1278201341a45b7e83dd6042396f187a 149 Pfam PF00011 Hsp20/alpha crystallin family 48 148 4.1E-23 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain C4901_02345 1278201341a45b7e83dd6042396f187a 149 SUPERFAMILY SSF49764 26 148 6.93E-39 T 14-10-2018 IPR008978 HSP20-like chaperone C4901_07250 db09c5e19af87976168c81e296129ff8 243 Pfam PF09347 Domain of unknown function (DUF1989) 16 187 4.2E-39 T 14-10-2018 IPR018959 Protein of unknown function DUF1989 C4901_07250 db09c5e19af87976168c81e296129ff8 243 TIGRFAM TIGR03425 urea_degr_2: urea carboxylase-associated protein 2 11 240 3.7E-74 T 14-10-2018 IPR017792 Urea carboxylase-associated protein 2 C4901_04690 6a4d6c86049195025c5cb0264090ea2d 328 Pfam PF13649 Methyltransferase domain 159 255 6.4E-15 T 14-10-2018 C4901_04690 6a4d6c86049195025c5cb0264090ea2d 328 Gene3D G3DSA:1.10.10.10 1 75 8.4E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_04690 6a4d6c86049195025c5cb0264090ea2d 328 Gene3D G3DSA:3.40.50.150 149 318 3.0E-34 T 14-10-2018 C4901_04690 6a4d6c86049195025c5cb0264090ea2d 328 SUPERFAMILY SSF46785 4 78 7.48E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_04690 6a4d6c86049195025c5cb0264090ea2d 328 SUPERFAMILY SSF53335 152 315 1.24E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_15635 23074c2f7329ba33f5fdb69c717fa4b0 434 Pfam PF13657 HipA N-terminal domain 11 123 8.7E-19 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 C4901_15635 23074c2f7329ba33f5fdb69c717fa4b0 434 Pfam PF07804 HipA-like C-terminal domain 178 409 4.8E-45 T 14-10-2018 IPR012893 HipA-like, C-terminal C4901_05715 ae7d5923561fe65bb9e0acc69c9edbf4 173 Pfam PF13036 Peptidoglycan-synthase activator LpoB 77 143 4.6E-5 T 14-10-2018 IPR014094 Penicillin-binding protein activator LpoB C4901_01810 ea5f4581310738f0889626504dbd8060 238 Gene3D G3DSA:3.40.50.1820 1 237 4.0E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_01810 ea5f4581310738f0889626504dbd8060 238 Pfam PF12146 Serine aminopeptidase, S33 2 207 7.2E-14 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 C4901_01810 ea5f4581310738f0889626504dbd8060 238 PRINTS PR00111 Alpha/beta hydrolase fold signature 183 197 4.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_01810 ea5f4581310738f0889626504dbd8060 238 PRINTS PR00111 Alpha/beta hydrolase fold signature 77 90 4.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_01810 ea5f4581310738f0889626504dbd8060 238 PRINTS PR00111 Alpha/beta hydrolase fold signature 23 38 4.9E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_01810 ea5f4581310738f0889626504dbd8060 238 SUPERFAMILY SSF53474 2 237 4.53E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_16355 5bde79c4b8ac07cdc6d53404ee930653 116 Pfam PF05036 Sporulation related domain 38 90 7.4E-12 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 C4901_16355 5bde79c4b8ac07cdc6d53404ee930653 116 Gene3D G3DSA:3.30.70.1070 34 115 2.0E-10 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C4901_16355 5bde79c4b8ac07cdc6d53404ee930653 116 SUPERFAMILY SSF110997 38 110 1.7E-11 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 C4901_00565 3605c6d65327cf0691f607ce98b3edd2 136 Pfam PF04186 FxsA cytoplasmic membrane protein 8 110 1.3E-25 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 C4901_16575 5f4981c155ce14964d00925a3f8b4967 175 Gene3D G3DSA:1.20.1250.20 3 126 3.2E-20 T 14-10-2018 C4901_16575 5f4981c155ce14964d00925a3f8b4967 175 SUPERFAMILY SSF103473 8 124 2.62E-12 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_16575 5f4981c155ce14964d00925a3f8b4967 175 Pfam PF07690 Major Facilitator Superfamily 20 122 2.1E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_00255 05a5bc4c597f5e42323a855e9736c87b 105 SMART SM00450 5 100 1.1E-20 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_00255 05a5bc4c597f5e42323a855e9736c87b 105 Pfam PF00581 Rhodanese-like domain 6 96 1.8E-14 T 14-10-2018 IPR001763 Rhodanese-like domain C4901_00255 05a5bc4c597f5e42323a855e9736c87b 105 SUPERFAMILY SSF52821 2 101 6.55E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_00255 05a5bc4c597f5e42323a855e9736c87b 105 Gene3D G3DSA:3.40.250.10 1 98 1.2E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily C4901_10820 ee1cae6c5e7906c79917dd0084839ba4 394 SMART SM00729 136 355 0.0092 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_10820 ee1cae6c5e7906c79917dd0084839ba4 394 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 35 387 1.9E-132 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 C4901_10820 ee1cae6c5e7906c79917dd0084839ba4 394 PIRSF PIRSF006004 32 392 1.0E-140 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 C4901_10820 ee1cae6c5e7906c79917dd0084839ba4 394 SUPERFAMILY SSF102114 135 376 2.75E-16 T 14-10-2018 C4901_10820 ee1cae6c5e7906c79917dd0084839ba4 394 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 37 383 72.369 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 C4901_10820 ee1cae6c5e7906c79917dd0084839ba4 394 Pfam PF04055 Radical SAM superfamily 141 307 6.7E-16 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_10820 ee1cae6c5e7906c79917dd0084839ba4 394 Gene3D G3DSA:1.10.150.530 37 98 5.9E-18 T 14-10-2018 C4901_10820 ee1cae6c5e7906c79917dd0084839ba4 394 Gene3D G3DSA:3.20.20.70 99 368 2.2E-109 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_07705 0d82828738e549f09a33125c79340a02 116 Gene3D G3DSA:1.10.10.10 2 111 1.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07705 0d82828738e549f09a33125c79340a02 116 Pfam PF01638 HxlR-like helix-turn-helix 16 104 7.3E-24 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type C4901_07705 0d82828738e549f09a33125c79340a02 116 SUPERFAMILY SSF46785 5 108 1.9E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_14790 5eb6d38d62e65c9ec3eae140c77a2166 148 Pfam PF01521 Iron-sulphur cluster biosynthesis 29 119 5.3E-8 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C4901_14790 5eb6d38d62e65c9ec3eae140c77a2166 148 SUPERFAMILY SSF89360 26 122 1.18E-18 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_14790 5eb6d38d62e65c9ec3eae140c77a2166 148 Gene3D G3DSA:2.60.300.12 30 133 1.6E-15 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_14790 5eb6d38d62e65c9ec3eae140c77a2166 148 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 32 131 8.6E-17 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C4901_11680 063b8849e44854227e9b3e45feb4a43d 74 TIGRFAM TIGR02574 stabl_TIGR02574: putative addiction module component, TIGR02574 family 11 70 9.1E-10 T 14-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module C4901_11680 063b8849e44854227e9b3e45feb4a43d 74 Pfam PF09720 Putative addiction module component 13 65 5.3E-12 T 14-10-2018 IPR013406 Conserved hypothetical protein CHP02574, addiction module C4901_04465 3e45a09d3278db4e44fc34de3ed5b242 289 Gene3D G3DSA:2.60.200.30 127 262 4.3E-91 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C4901_04465 3e45a09d3278db4e44fc34de3ed5b242 289 SUPERFAMILY SSF111331 7 287 3.01E-83 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily C4901_04465 3e45a09d3278db4e44fc34de3ed5b242 289 Pfam PF01513 ATP-NAD kinase 58 265 5.0E-60 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C4901_04465 3e45a09d3278db4e44fc34de3ed5b242 289 Hamap MF_00361 NAD kinase [nadK]. 6 285 32.837 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 C4901_04465 3e45a09d3278db4e44fc34de3ed5b242 289 Gene3D G3DSA:3.40.50.10330 24 285 4.3E-91 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 C4901_12855 e4088faeba6e51a503d2470c7842bbac 80 SMART SM00966 6 51 2.4E-7 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_12855 e4088faeba6e51a503d2470c7842bbac 80 SUPERFAMILY SSF89447 1 72 9.07E-17 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_12855 e4088faeba6e51a503d2470c7842bbac 80 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 6 47 8.2E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_12855 e4088faeba6e51a503d2470c7842bbac 80 Gene3D G3DSA:2.10.260.10 1 79 6.4E-23 T 14-10-2018 C4901_15140 94f0665c0f266810a728188ab66e29f8 114 Gene3D G3DSA:3.30.70.1290 7 111 3.1E-17 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_15140 94f0665c0f266810a728188ab66e29f8 114 Pfam PF01797 Transposase IS200 like 24 105 3.1E-18 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_15140 94f0665c0f266810a728188ab66e29f8 114 SMART SM01321 22 110 9.1E-4 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 C4901_15140 94f0665c0f266810a728188ab66e29f8 114 SUPERFAMILY SSF143422 18 106 7.98E-20 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 C4901_07535 8fa442adb3ca9741ab4e250bd3729a17 614 Gene3D G3DSA:3.30.1490.20 46 126 3.5E-7 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 C4901_07535 8fa442adb3ca9741ab4e250bd3729a17 614 SUPERFAMILY SSF52009 360 466 6.93E-22 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 C4901_07535 8fa442adb3ca9741ab4e250bd3729a17 614 Gene3D G3DSA:3.50.30.10 358 468 3.6E-23 T 14-10-2018 C4901_07535 8fa442adb3ca9741ab4e250bd3729a17 614 SUPERFAMILY SSF56059 8 315 3.06E-28 T 14-10-2018 C4901_07535 8fa442adb3ca9741ab4e250bd3729a17 614 Pfam PF00391 PEP-utilising enzyme, mobile domain 395 461 2.5E-19 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 C4901_07535 8fa442adb3ca9741ab4e250bd3729a17 614 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 62 313 5.2E-23 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 C4901_13575 23578e521feba56632077d86a912a856 91 SUPERFAMILY SSF48295 2 60 3.19E-13 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C4901_13575 23578e521feba56632077d86a912a856 91 Pfam PF01527 Transposase 3 53 2.8E-9 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C4901_05665 23578e521feba56632077d86a912a856 91 SUPERFAMILY SSF48295 2 60 3.19E-13 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 C4901_05665 23578e521feba56632077d86a912a856 91 Pfam PF01527 Transposase 3 53 2.8E-9 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 C4901_05065 b51c39b5b9edabf90309eeae8ca5a0de 228 SUPERFAMILY SSF54523 20 132 2.75E-13 T 14-10-2018 C4901_05065 b51c39b5b9edabf90309eeae8ca5a0de 228 Gene3D G3DSA:3.30.700.10 20 130 1.2E-10 T 14-10-2018 C4901_05065 b51c39b5b9edabf90309eeae8ca5a0de 228 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 17 39 1.7E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_05520 79ecb0c2ffad3338e448501d5c1f4be7 76 Pfam PF02798 Glutathione S-transferase, N-terminal domain 12 43 4.0E-8 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 C4901_05520 79ecb0c2ffad3338e448501d5c1f4be7 76 SUPERFAMILY SSF52833 8 50 4.4E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_05520 79ecb0c2ffad3338e448501d5c1f4be7 76 Gene3D G3DSA:3.40.30.10 2 66 7.9E-16 T 14-10-2018 C4901_13365 1ef9c41584d7f9326c6a2056a68b1ca8 419 SUPERFAMILY SSF51556 58 354 4.95E-66 T 14-10-2018 IPR032466 Metal-dependent hydrolase C4901_13365 1ef9c41584d7f9326c6a2056a68b1ca8 419 SUPERFAMILY SSF51338 14 74 2.16E-8 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_13365 1ef9c41584d7f9326c6a2056a68b1ca8 419 Pfam PF01979 Amidohydrolase family 55 366 9.2E-42 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 C4901_13365 1ef9c41584d7f9326c6a2056a68b1ca8 419 Gene3D G3DSA:2.30.40.10 15 58 7.8E-89 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 C4901_13365 1ef9c41584d7f9326c6a2056a68b1ca8 419 Gene3D G3DSA:3.20.20.140 59 367 7.8E-89 T 14-10-2018 C4901_14255 e2ba80ed21d3b9609702242506c4cadc 315 Gene3D G3DSA:1.10.10.10 2 56 3.3E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_14255 e2ba80ed21d3b9609702242506c4cadc 315 Pfam PF03099 Biotin/lipoate A/B protein ligase family 101 204 4.6E-13 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C4901_14255 e2ba80ed21d3b9609702242506c4cadc 315 Gene3D G3DSA:3.30.930.10 71 265 2.5E-49 T 14-10-2018 C4901_14255 e2ba80ed21d3b9609702242506c4cadc 315 SUPERFAMILY SSF50037 268 313 9.61E-6 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal C4901_14255 e2ba80ed21d3b9609702242506c4cadc 315 Gene3D G3DSA:2.30.30.100 269 315 4.1E-10 T 14-10-2018 C4901_14255 e2ba80ed21d3b9609702242506c4cadc 315 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 82 312 1.3E-49 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 C4901_14255 e2ba80ed21d3b9609702242506c4cadc 315 SUPERFAMILY SSF55681 80 265 1.36E-42 T 14-10-2018 C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 Pfam PF01011 PQQ enzyme repeat 171 198 5.7E-7 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 SMART SM00564 315 347 0.23 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 SMART SM00564 165 197 3.6E-7 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 SMART SM00564 361 401 760.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 SMART SM00564 274 305 1.6E-6 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 SMART SM00564 234 265 25.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 SMART SM00564 457 488 100.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 SMART SM00564 416 448 80.0 T 14-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 Gene3D G3DSA:2.130.10.10 124 228 1.0E-10 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 Pfam PF13360 PQQ-like domain 387 484 7.2E-10 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 Pfam PF13360 PQQ-like domain 237 347 1.0E-14 T 14-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 Gene3D G3DSA:2.130.10.10 229 526 7.2E-46 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_10940 b3616ca70e99bf6938fa275212255bd0 530 SUPERFAMILY SSF50998 97 518 1.91E-42 T 14-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 Gene3D G3DSA:3.40.190.290 95 302 6.6E-37 T 14-10-2018 C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 SUPERFAMILY SSF53850 94 298 4.03E-37 T 14-10-2018 C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 Pfam PF03466 LysR substrate binding domain 93 295 5.5E-38 T 14-10-2018 IPR005119 LysR, substrate-binding C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 4.4E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 SUPERFAMILY SSF46785 3 112 8.02E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_09885 8e694ffc45e0bab8f7759f8c215571d1 303 Gene3D G3DSA:1.10.10.10 3 94 2.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_13660 b026f5c733bf6859ace4fbe5c0d4063f 271 Pfam PF01610 Transposase 168 243 3.7E-16 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_08120 effcc2441b028eb7b053a5dfb7ab98a5 82 SUPERFAMILY SSF89447 2 44 6.8E-12 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily C4901_08120 effcc2441b028eb7b053a5dfb7ab98a5 82 ProDom PD030562 SUPPRESSOR HTRA PROTEASE TRANSCRIPTIONAL REGULATOR HTAR SOHA ABRB YDCA BLL1688 4 44 0.002 T 14-10-2018 C4901_08120 effcc2441b028eb7b053a5dfb7ab98a5 82 Pfam PF15937 prlF antitoxin for toxin YhaV_toxin 4 48 8.3E-10 T 14-10-2018 IPR031848 PrlF antitoxin GO:0001558|GO:0003700|GO:0097351 C4901_08120 effcc2441b028eb7b053a5dfb7ab98a5 82 Gene3D G3DSA:2.10.260.10 2 43 3.4E-13 T 14-10-2018 C4901_08120 effcc2441b028eb7b053a5dfb7ab98a5 82 SMART SM00966 4 50 1.4E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_08120 effcc2441b028eb7b053a5dfb7ab98a5 82 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 5 45 2.4E-14 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 7 555 5.1E-189 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 4 692 23.377 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 4 692 5.4E-198 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 SUPERFAMILY SSF109604 343 492 3.99E-15 T 14-10-2018 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 Pfam PF05746 DALR anticodon binding domain 587 680 1.9E-5 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 8 21 5.7E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 249 264 5.7E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 53 65 5.7E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 320 336 5.7E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_01175 9bdb8e16351ecb1138043e44523afefe 700 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 396 415 5.7E-30 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 C4901_07730 e3df815f8356d7b32b6b2d51db5639a7 279 Pfam PF06629 MltA-interacting protein MipA 41 273 3.6E-23 T 14-10-2018 IPR010583 MltA-interacting MipA C4901_09590 21114a686272b4d7f811c3eb3323f586 233 PIRSF PIRSF004848 3 233 7.4E-63 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C4901_09590 21114a686272b4d7f811c3eb3323f586 233 SUPERFAMILY SSF51419 2 228 3.66E-69 T 14-10-2018 IPR029066 PLP-binding barrel C4901_09590 21114a686272b4d7f811c3eb3323f586 233 Gene3D G3DSA:3.20.20.10 1 232 1.4E-78 T 14-10-2018 IPR029066 PLP-binding barrel C4901_09590 21114a686272b4d7f811c3eb3323f586 233 Pfam PF01168 Alanine racemase, N-terminal domain 10 230 2.8E-25 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 C4901_09590 21114a686272b4d7f811c3eb3323f586 233 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 6 230 7.9E-56 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C4901_09590 21114a686272b4d7f811c3eb3323f586 233 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 229 28.475 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 C4901_00745 76b99cdc5555f77a5b515fdfa279e95c 177 Gene3D G3DSA:1.20.1290.10 14 177 1.6E-27 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C4901_00745 76b99cdc5555f77a5b515fdfa279e95c 177 SUPERFAMILY SSF69118 6 176 3.74E-34 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 C4901_10115 2a8f82d787eadf3b533f1a2c024c45f4 110 Gene3D G3DSA:3.30.190.10 1 110 2.7E-47 T 14-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10115 2a8f82d787eadf3b533f1a2c024c45f4 110 SUPERFAMILY SSF55239 4 109 2.88E-44 T 14-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10115 2a8f82d787eadf3b533f1a2c024c45f4 110 SMART SM00961 12 109 1.8E-55 T 14-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_10115 2a8f82d787eadf3b533f1a2c024c45f4 110 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 13 108 6.7E-42 T 14-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 C4901_09405 442e803c4c1ad6515c54bc4a51c6d763 195 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 187 1.5E-52 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C4901_09405 442e803c4c1ad6515c54bc4a51c6d763 195 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C4901_09405 442e803c4c1ad6515c54bc4a51c6d763 195 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 69 4.2E-18 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C4901_09405 442e803c4c1ad6515c54bc4a51c6d763 195 PIRSF PIRSF000847 1 195 3.2E-42 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C4901_09405 442e803c4c1ad6515c54bc4a51c6d763 195 Gene3D G3DSA:1.20.120.1760 2 182 1.3E-14 T 14-10-2018 C4901_17080 b881876db33389abfd6cbf7e28c61478 200 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 26 47 4.9E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_17080 b881876db33389abfd6cbf7e28c61478 200 SUPERFAMILY SSF54523 29 110 4.47E-8 T 14-10-2018 C4901_17080 b881876db33389abfd6cbf7e28c61478 200 Pfam PF07963 Prokaryotic N-terminal methylation motif 23 47 9.2E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_03335 a60fc64297532adfd24dde20bb608ad3 246 SMART SM00382 9 143 1.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain C4901_03335 a60fc64297532adfd24dde20bb608ad3 246 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 14 100 6.1E-5 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 C4901_03335 a60fc64297532adfd24dde20bb608ad3 246 SUPERFAMILY SSF52540 3 222 3.45E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_03335 a60fc64297532adfd24dde20bb608ad3 246 Gene3D G3DSA:3.40.50.300 2 150 9.2E-8 T 14-10-2018 C4901_13130 674187e3bf0b6e1e67c61dfd183f0c89 330 Pfam PF02371 Transposase IS116/IS110/IS902 family 189 262 4.2E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C4901_13130 674187e3bf0b6e1e67c61dfd183f0c89 330 Pfam PF01548 Transposase 5 119 4.1E-9 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C4901_11340 afce9420f3c3df73c617a90576cda627 201 Gene3D G3DSA:2.40.30.20 1 89 7.9E-25 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_11340 afce9420f3c3df73c617a90576cda627 201 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 2.2E-55 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11340 afce9420f3c3df73c617a90576cda627 201 Gene3D G3DSA:2.40.30.20 102 198 9.6E-30 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 C4901_11340 afce9420f3c3df73c617a90576cda627 201 PIRSF PIRSF000498 1 199 9.0E-64 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11340 afce9420f3c3df73c617a90576cda627 201 SUPERFAMILY SSF63380 1 92 1.11E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C4901_11340 afce9420f3c3df73c617a90576cda627 201 SUPERFAMILY SSF63380 94 195 9.35E-30 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel C4901_11340 afce9420f3c3df73c617a90576cda627 201 Pfam PF00677 Lumazine binding domain 100 184 1.2E-20 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_11340 afce9420f3c3df73c617a90576cda627 201 Pfam PF00677 Lumazine binding domain 3 87 4.6E-19 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 C4901_02675 6269b8973aca598f008d958e6ba13c12 313 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 222 309 8.5E-17 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain C4901_02675 6269b8973aca598f008d958e6ba13c12 313 SUPERFAMILY SSF54534 116 311 9.62E-47 T 14-10-2018 C4901_02675 6269b8973aca598f008d958e6ba13c12 313 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 112 215 1.6E-21 T 14-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 C4901_02675 6269b8973aca598f008d958e6ba13c12 313 Gene3D G3DSA:3.10.50.40 210 313 1.5E-29 T 14-10-2018 C4901_02675 6269b8973aca598f008d958e6ba13c12 313 Gene3D G3DSA:1.10.287.460 109 209 6.2E-26 T 14-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 C4901_14295 91e58ae8c0dafb604b64d624b702f575 118 Gene3D G3DSA:2.60.300.12 13 118 1.9E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_14295 91e58ae8c0dafb604b64d624b702f575 118 SUPERFAMILY SSF89360 11 104 7.98E-32 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 C4901_14295 91e58ae8c0dafb604b64d624b702f575 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 14 118 2.6E-39 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 C4901_14295 91e58ae8c0dafb604b64d624b702f575 118 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 99 116 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 C4901_14295 91e58ae8c0dafb604b64d624b702f575 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 13 113 3.4E-21 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 C4901_14295 91e58ae8c0dafb604b64d624b702f575 118 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 118 36.311 T 14-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 C4901_07385 0079e3a0bc802757ac6249653d96eae2 169 Gene3D G3DSA:1.10.443.10 10 168 6.3E-34 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_07385 0079e3a0bc802757ac6249653d96eae2 169 Pfam PF00589 Phage integrase family 15 161 1.3E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_07385 0079e3a0bc802757ac6249653d96eae2 169 SUPERFAMILY SSF56349 14 164 4.71E-40 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_02445 771b20151004e06f9ec91b8631f910d9 281 Pfam PF00589 Phage integrase family 101 259 2.0E-24 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 C4901_02445 771b20151004e06f9ec91b8631f910d9 281 Gene3D G3DSA:1.10.150.130 2 95 4.8E-6 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_02445 771b20151004e06f9ec91b8631f910d9 281 Gene3D G3DSA:1.10.443.10 97 270 1.6E-31 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_02445 771b20151004e06f9ec91b8631f910d9 281 SUPERFAMILY SSF56349 10 265 6.47E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_15715 70ab74da06b7a9d85ae5f5d4ab447748 143 Pfam PF04343 Protein of unknown function, DUF488 14 131 1.8E-19 T 14-10-2018 IPR007438 Protein of unknown function DUF488 C4901_13920 c6a33909c6bf79628a56eb0dbe6a1e0b 209 Pfam PF04893 Yip1 domain 21 171 6.6E-10 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 C4901_13495 888563427faaacd2987834ce0f39063c 713 Gene3D G3DSA:2.60.120.260 52 181 1.0E-5 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily C4901_13495 888563427faaacd2987834ce0f39063c 713 Pfam PF03170 Bacterial cellulose synthase subunit 62 569 1.9E-35 T 14-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 C4901_13495 888563427faaacd2987834ce0f39063c 713 Gene3D G3DSA:2.60.120.260 350 473 1.4E-8 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily C4901_13090 5c0981d36391e31c534a12077c7dbb71 389 Gene3D G3DSA:3.40.50.300 22 231 3.7E-90 T 14-10-2018 C4901_13090 5c0981d36391e31c534a12077c7dbb71 389 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 25 232 3.9E-88 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 C4901_16140 da61d93cddf02d3fa4cfbd83c8725c33 452 SUPERFAMILY SSF56954 2 440 6.41E-69 T 14-10-2018 C4901_16140 da61d93cddf02d3fa4cfbd83c8725c33 452 Gene3D G3DSA:1.20.1600.10 14 444 1.0E-70 T 14-10-2018 C4901_16140 da61d93cddf02d3fa4cfbd83c8725c33 452 Pfam PF02321 Outer membrane efflux protein 257 436 9.0E-21 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_16140 da61d93cddf02d3fa4cfbd83c8725c33 452 Pfam PF02321 Outer membrane efflux protein 26 232 5.8E-25 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_01630 dfb7da94336375434e9f38f89e0fe0fa 396 Pfam PF02405 Permease MlaE 180 387 6.8E-61 T 14-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 C4901_00170 4d114e31c651d46bfe3d11057409df56 419 Pfam PF04403 Paraquat-inducible protein A 259 413 1.1E-36 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like C4901_00170 4d114e31c651d46bfe3d11057409df56 419 Pfam PF04403 Paraquat-inducible protein A 60 212 1.8E-28 T 14-10-2018 IPR007498 Intermembrane transport protein PqiA-like C4901_06240 32a36b5e0734e1d84fac8aed0b29ac3b 87 SMART SM00834 1 41 4.1E-7 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C4901_06240 32a36b5e0734e1d84fac8aed0b29ac3b 87 Pfam PF09723 Zinc ribbon domain 1 38 1.4E-9 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C4901_06240 32a36b5e0734e1d84fac8aed0b29ac3b 87 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 46 8.5E-12 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain C4901_01080 d93f01b3a28b3158b4c9bc2b3e9be234 305 SUPERFAMILY SSF53328 6 204 2.35E-58 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_01080 d93f01b3a28b3158b4c9bc2b3e9be234 305 SUPERFAMILY SSF50486 208 302 3.45E-17 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 C4901_01080 d93f01b3a28b3158b4c9bc2b3e9be234 305 Pfam PF00551 Formyl transferase 28 178 2.7E-28 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_01080 d93f01b3a28b3158b4c9bc2b3e9be234 305 Gene3D G3DSA:3.40.50.12230 5 298 6.5E-90 T 14-10-2018 C4901_01080 d93f01b3a28b3158b4c9bc2b3e9be234 305 Pfam PF02911 Formyl transferase, C-terminal domain 207 290 4.9E-12 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 C4901_12310 1de1cbbe5144ed56a0960ba5d76a83f9 857 SUPERFAMILY SSF55781 301 437 2.32E-6 T 14-10-2018 C4901_12310 1de1cbbe5144ed56a0960ba5d76a83f9 857 SMART SM00052 433 704 2.6E-34 T 14-10-2018 IPR001633 EAL domain C4901_12310 1de1cbbe5144ed56a0960ba5d76a83f9 857 SUPERFAMILY SSF141868 468 711 4.97E-51 T 14-10-2018 IPR035919 EAL domain superfamily C4901_12310 1de1cbbe5144ed56a0960ba5d76a83f9 857 Gene3D G3DSA:1.10.490.10 130 272 1.6E-8 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 C4901_12310 1de1cbbe5144ed56a0960ba5d76a83f9 857 Pfam PF00563 EAL domain 466 699 1.1E-42 T 14-10-2018 IPR001633 EAL domain C4901_12310 1de1cbbe5144ed56a0960ba5d76a83f9 857 Gene3D G3DSA:3.30.450.40 278 451 1.3E-8 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_12310 1de1cbbe5144ed56a0960ba5d76a83f9 857 Gene3D G3DSA:3.20.20.450 465 714 6.2E-58 T 14-10-2018 IPR035919 EAL domain superfamily C4901_08860 b02b5f9c2ab836d764beb0d83f68b3e7 360 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 16 325 7.1E-71 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C4901_08860 b02b5f9c2ab836d764beb0d83f68b3e7 360 Pfam PF02618 YceG-like family 40 324 4.5E-69 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C4901_08860 b02b5f9c2ab836d764beb0d83f68b3e7 360 Gene3D G3DSA:1.10.8.1150 36 107 3.1E-5 T 14-10-2018 C4901_08860 b02b5f9c2ab836d764beb0d83f68b3e7 360 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 11 328 29.505 T 14-10-2018 IPR003770 Endolytic murein transglycosylase C4901_08860 b02b5f9c2ab836d764beb0d83f68b3e7 360 Gene3D G3DSA:3.30.160.60 299 327 7.5E-8 T 14-10-2018 C4901_08955 80b90cae4a91397d4ffe0aea85eae07d 450 Pfam PF07282 Putative transposase DNA-binding domain 327 395 4.3E-16 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_12130 8a22db331e6dfdae425b11628520e065 106 Pfam PF05717 IS66 Orf2 like protein 17 95 7.0E-25 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_06755 7d8baaacb0f8406cbf631ee094e7a8de 57 Pfam PF14236 Domain of unknown function (DUF4338) 16 55 1.9E-8 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_09355 4236d69f312289287824b4775d329311 275 Pfam PF01936 NYN domain 3 167 4.6E-14 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type C4901_09355 4236d69f312289287824b4775d329311 275 Gene3D G3DSA:3.40.50.1010 1 169 5.0E-7 T 14-10-2018 C4901_01650 89e9750a1b97f7b5decb4f5d43f2728c 166 Pfam PF03695 Uncharacterised protein family (UPF0149) 15 164 1.4E-19 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 C4901_01650 89e9750a1b97f7b5decb4f5d43f2728c 166 SUPERFAMILY SSF101327 5 163 1.44E-22 T 14-10-2018 IPR036255 YgfB-like superfamily C4901_01650 89e9750a1b97f7b5decb4f5d43f2728c 166 Gene3D G3DSA:1.20.120.740 2 166 8.8E-38 T 14-10-2018 C4901_05890 7fdd23d7fdef6b4af9ae60cc6fd0486c 229 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 24 220 4.6E-46 T 14-10-2018 IPR006214 Bax inhibitor 1-related C4901_01480 7839adbe59e97ecc3ca8d1db1fa8ef1b 415 Pfam PF07804 HipA-like C-terminal domain 172 383 1.2E-43 T 14-10-2018 IPR012893 HipA-like, C-terminal C4901_01480 7839adbe59e97ecc3ca8d1db1fa8ef1b 415 Pfam PF13657 HipA N-terminal domain 27 92 3.2E-5 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 C4901_08360 15be6df5f381ec5bd55f004f559250ad 261 Gene3D G3DSA:1.25.40.10 31 254 3.6E-53 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_08360 15be6df5f381ec5bd55f004f559250ad 261 Pfam PF13525 Outer membrane lipoprotein 31 236 1.2E-56 T 14-10-2018 IPR039565 Outer membrane lipoprotein BamD-like C4901_08360 15be6df5f381ec5bd55f004f559250ad 261 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 3 243 31.612 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD C4901_08360 15be6df5f381ec5bd55f004f559250ad 261 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 248 1.1E-72 T 14-10-2018 IPR017689 Outer membrane protein assembly factor BamD C4901_08360 15be6df5f381ec5bd55f004f559250ad 261 SUPERFAMILY SSF48452 29 108 1.58E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_09625 48953070c2cc245bea40c72d6476269c 258 SMART SM00563 69 181 3.1E-29 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C4901_09625 48953070c2cc245bea40c72d6476269c 258 Pfam PF01553 Acyltransferase 66 178 4.2E-22 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 C4901_09625 48953070c2cc245bea40c72d6476269c 258 SUPERFAMILY SSF69593 64 244 2.62E-27 T 14-10-2018 C4901_05365 3c8368d6416c33aa189b8abb99d3c401 374 Pfam PF00535 Glycosyl transferase family 2 47 214 1.1E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_05365 3c8368d6416c33aa189b8abb99d3c401 374 Gene3D G3DSA:3.90.550.10 29 278 6.7E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_05365 3c8368d6416c33aa189b8abb99d3c401 374 SUPERFAMILY SSF53448 45 246 1.13E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_15150 fd177c637bdd677f4db119639c76cb90 244 Pfam PF07592 Rhodopirellula transposase DDE domain 74 238 5.6E-71 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_04145 898b0bbe3885f9c507696075feb73287 87 Gene3D G3DSA:1.10.1200.10 4 87 7.8E-14 T 14-10-2018 IPR036736 ACP-like superfamily C4901_04145 898b0bbe3885f9c507696075feb73287 87 Pfam PF00550 Phosphopantetheine attachment site 24 75 1.9E-11 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain C4901_04145 898b0bbe3885f9c507696075feb73287 87 SUPERFAMILY SSF47336 9 78 2.75E-13 T 14-10-2018 IPR036736 ACP-like superfamily C4901_13285 a68a594da382cabf03dec6da573e7627 144 Gene3D G3DSA:3.40.50.1010 4 140 1.2E-37 T 14-10-2018 C4901_13285 a68a594da382cabf03dec6da573e7627 144 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 4 138 10.149 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_13285 a68a594da382cabf03dec6da573e7627 144 SUPERFAMILY SSF88723 4 141 3.92E-29 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_13285 a68a594da382cabf03dec6da573e7627 144 Pfam PF01850 PIN domain 5 126 1.4E-14 T 14-10-2018 IPR002716 PIN domain C4901_07045 9ae903671e80eb9aa3ae6b39d5ba0d9f 473 Pfam PF00990 Diguanylate cyclase, GGDEF domain 302 459 3.4E-44 T 14-10-2018 IPR000160 GGDEF domain C4901_07045 9ae903671e80eb9aa3ae6b39d5ba0d9f 473 Gene3D G3DSA:3.30.70.270 296 464 2.0E-55 T 14-10-2018 C4901_07045 9ae903671e80eb9aa3ae6b39d5ba0d9f 473 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 300 462 8.3E-50 T 14-10-2018 IPR000160 GGDEF domain C4901_07045 9ae903671e80eb9aa3ae6b39d5ba0d9f 473 SMART SM00267 291 463 4.1E-53 T 14-10-2018 IPR000160 GGDEF domain C4901_07045 9ae903671e80eb9aa3ae6b39d5ba0d9f 473 SUPERFAMILY SSF55073 307 464 3.92E-48 T 14-10-2018 IPR029787 Nucleotide cyclase C4901_07045 9ae903671e80eb9aa3ae6b39d5ba0d9f 473 Pfam PF17158 Membrane-associated sensor, integral membrane domain 51 274 3.2E-18 T 14-10-2018 IPR033424 Membrane-associated sensor domain C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 SMART SM00938 4 105 2.2E-65 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 SUPERFAMILY SSF54913 1 112 1.3E-45 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 Gene3D G3DSA:3.30.70.120 1 112 9.3E-47 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 PRINTS PR00340 P-II protein signature 23 41 2.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 PRINTS PR00340 P-II protein signature 83 103 2.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 PRINTS PR00340 P-II protein signature 52 75 2.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 PRINTS PR00340 P-II protein signature 2 17 2.7E-44 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 5.7E-43 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C4901_16600 f4ea3deb0ba160273c3efcf43a9e8391 112 PIRSF PIRSF039144 1 112 1.9E-54 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 C4901_16825 fe9e91fb0c66dc06bf7daf8281cf1d1b 229 Pfam PF08241 Methyltransferase domain 46 120 2.2E-6 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 C4901_16825 fe9e91fb0c66dc06bf7daf8281cf1d1b 229 SUPERFAMILY SSF53335 61 204 6.04E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_14795 8b3ca8e1a5a1df26562f0dde066677d1 72 Pfam PF00037 4Fe-4S binding domain 3 26 7.5E-7 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_14795 8b3ca8e1a5a1df26562f0dde066677d1 72 SUPERFAMILY SSF54862 5 64 2.74E-15 T 14-10-2018 C4901_14795 8b3ca8e1a5a1df26562f0dde066677d1 72 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 10 21 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site C4901_14795 8b3ca8e1a5a1df26562f0dde066677d1 72 Gene3D G3DSA:3.30.70.20 4 72 1.0E-23 T 14-10-2018 C4901_07125 70c81d144e74263c49bb1a841ea83245 102 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 90 5.8E-20 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C4901_07125 70c81d144e74263c49bb1a841ea83245 102 Gene3D G3DSA:3.30.2310.20 1 95 4.7E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_00195 8a73016a46177add678a23bbb528b6a2 243 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 75 7.3E-21 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 C4901_00195 8a73016a46177add678a23bbb528b6a2 243 SUPERFAMILY SSF51695 4 231 5.65E-34 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 C4901_00195 8a73016a46177add678a23bbb528b6a2 243 Gene3D G3DSA:3.20.20.190 1 240 2.0E-36 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 C4901_15090 c7511e247926422f3ef22538e4b5e8af 442 Pfam PF01385 Probable transposase 180 299 5.6E-16 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C4901_15090 c7511e247926422f3ef22538e4b5e8af 442 Pfam PF12323 Helix-turn-helix domain 5 46 7.4E-7 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain C4901_15465 8e04992fc45a9941ea08dcc7dc14bdee 418 Pfam PF00665 Integrase core domain 192 301 1.9E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_15465 8e04992fc45a9941ea08dcc7dc14bdee 418 Gene3D G3DSA:3.30.420.10 192 325 1.8E-6 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_15465 8e04992fc45a9941ea08dcc7dc14bdee 418 SUPERFAMILY SSF53098 194 326 1.17E-14 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_04280 042025df17b134bea7a33f21f4cb566e 492 Gene3D G3DSA:1.20.1250.20 242 479 6.4E-16 T 14-10-2018 C4901_04280 042025df17b134bea7a33f21f4cb566e 492 SUPERFAMILY SSF103473 3 428 1.7E-72 T 14-10-2018 IPR036259 MFS transporter superfamily C4901_04280 042025df17b134bea7a33f21f4cb566e 492 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 1 473 2.9E-122 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 C4901_04280 042025df17b134bea7a33f21f4cb566e 492 ProSitePatterns PS00216 Sugar transport proteins signature 1. 50 66 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 C4901_04280 042025df17b134bea7a33f21f4cb566e 492 Gene3D G3DSA:1.20.1720.10 1 231 6.9E-54 T 14-10-2018 C4901_04280 042025df17b134bea7a33f21f4cb566e 492 Pfam PF07690 Major Facilitator Superfamily 3 392 2.2E-62 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 C4901_16950 35566658400a8ab3340e6a5236b7ec87 231 Pfam PF04012 PspA/IM30 family 2 228 1.5E-30 T 14-10-2018 IPR007157 PspA/IM30 C4901_11725 7121a02256a08ad5f9b528c98f2d53f8 269 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 9 267 39.507 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C4901_11725 7121a02256a08ad5f9b528c98f2d53f8 269 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 14 267 8.4E-89 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C4901_11725 7121a02256a08ad5f9b528c98f2d53f8 269 Gene3D G3DSA:3.20.20.60 7 269 2.0E-99 T 14-10-2018 C4901_11725 7121a02256a08ad5f9b528c98f2d53f8 269 Pfam PF02548 Ketopantoate hydroxymethyltransferase 9 262 7.1E-99 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C4901_11725 7121a02256a08ad5f9b528c98f2d53f8 269 PIRSF PIRSF000388 2 269 3.7E-90 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 C4901_11725 7121a02256a08ad5f9b528c98f2d53f8 269 SUPERFAMILY SSF51621 9 265 5.38E-92 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 C4901_16840 a80f3aa3fcdacd4e4fa105e2a24db74f 259 Gene3D G3DSA:3.30.930.30 11 188 3.4E-19 T 14-10-2018 C4901_16840 a80f3aa3fcdacd4e4fa105e2a24db74f 259 Pfam PF03389 MobA/MobL family 25 143 1.9E-19 T 14-10-2018 IPR005053 MobA/MobL protein C4901_07240 9769641014e62c304aa17ef320369aac 286 SUPERFAMILY SSF161098 87 273 3.01E-30 T 14-10-2018 IPR035906 MetI-like superfamily C4901_07240 9769641014e62c304aa17ef320369aac 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 283 3.4E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C4901_07240 9769641014e62c304aa17ef320369aac 286 Gene3D G3DSA:1.10.3720.10 82 280 1.6E-22 T 14-10-2018 IPR035906 MetI-like superfamily C4901_06340 a3fbc5b9baeab56947ba8d217c0b6a41 944 Gene3D G3DSA:2.130.10.10 316 462 4.8E-13 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_06340 a3fbc5b9baeab56947ba8d217c0b6a41 944 SUPERFAMILY SSF53649 534 811 9.42E-8 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 C4901_06340 a3fbc5b9baeab56947ba8d217c0b6a41 944 Gene3D G3DSA:2.130.10.10 115 315 1.3E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_06340 a3fbc5b9baeab56947ba8d217c0b6a41 944 SUPERFAMILY SSF63825 151 425 5.23E-28 T 14-10-2018 C4901_16255 a98148b1b29590c33ef754d1d594ae3e 436 Gene3D G3DSA:3.40.50.300 127 367 1.8E-31 T 14-10-2018 C4901_16255 a98148b1b29590c33ef754d1d594ae3e 436 SUPERFAMILY SSF52540 126 349 2.26E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_16255 a98148b1b29590c33ef754d1d594ae3e 436 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 129 253 1.7E-9 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain C4901_01090 a3acffc1528b5a994af6f18ef13f6afe 304 SUPERFAMILY SSF88713 15 273 5.28E-26 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 C4901_01090 a3acffc1528b5a994af6f18ef13f6afe 304 Pfam PF01522 Polysaccharide deacetylase 17 172 6.3E-12 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 C4901_03690 5ba1b6b1460d317767a9b8130770dfcb 261 Pfam PF14236 Domain of unknown function (DUF4338) 30 258 1.1E-66 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_12655 000117fd138645f75904f84bc70da3c7 469 Gene3D G3DSA:1.10.150.20 161 207 2.9E-5 T 14-10-2018 C4901_12655 000117fd138645f75904f84bc70da3c7 469 SUPERFAMILY SSF56672 19 216 6.85E-23 T 14-10-2018 C4901_12655 000117fd138645f75904f84bc70da3c7 469 Gene3D G3DSA:2.30.40.20 26 63 2.9E-5 T 14-10-2018 C4901_12655 000117fd138645f75904f84bc70da3c7 469 Gene3D G3DSA:3.30.70.270 64 160 2.9E-5 T 14-10-2018 C4901_00655 735e1f9563f7ad35e2fc162a8f01e702 221 Pfam PF01863 Protein of unknown function DUF45 13 213 2.8E-51 T 14-10-2018 IPR002725 Protein of unknown function DUF45 C4901_00655 735e1f9563f7ad35e2fc162a8f01e702 221 Gene3D G3DSA:3.30.2010.10 128 218 1.7E-20 T 14-10-2018 C4901_12955 ba0faed774c8cb281a07687343b93868 303 Pfam PF02754 Cysteine-rich domain 153 246 3.1E-11 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_12955 ba0faed774c8cb281a07687343b93868 303 Pfam PF02754 Cysteine-rich domain 4 88 1.0E-15 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_06810 deb0b3ef42096c8678f626aa4fb80729 159 SUPERFAMILY SSF48695 39 117 5.37E-9 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily C4901_06810 deb0b3ef42096c8678f626aa4fb80729 159 Gene3D G3DSA:3.90.10.10 52 121 1.1E-5 T 14-10-2018 C4901_10695 df8ba9f2675795fb98272e1042f6bc88 316 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 28 312 19.388 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 C4901_10695 df8ba9f2675795fb98272e1042f6bc88 316 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 31 310 3.2E-93 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 C4901_10695 df8ba9f2675795fb98272e1042f6bc88 316 Pfam PF01040 UbiA prenyltransferase family 45 293 2.7E-57 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 C4901_10695 df8ba9f2675795fb98272e1042f6bc88 316 Gene3D G3DSA:1.10.357.140 39 204 2.7E-20 T 14-10-2018 C4901_16530 d6da8d241b0a941a5f9760905f9c88b8 201 SUPERFAMILY SSF161098 1 193 7.46E-26 T 14-10-2018 IPR035906 MetI-like superfamily C4901_16530 d6da8d241b0a941a5f9760905f9c88b8 201 Gene3D G3DSA:1.10.3720.10 1 200 4.0E-33 T 14-10-2018 IPR035906 MetI-like superfamily C4901_16530 d6da8d241b0a941a5f9760905f9c88b8 201 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 22 196 1.1E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C4901_15850 423599c1964db7c172d044eafd9c24d1 401 PIRSF PIRSF029285 1 358 6.2E-103 T 14-10-2018 IPR014553 Predicted aminopeptidase C4901_15850 423599c1964db7c172d044eafd9c24d1 401 Pfam PF10023 Putative aminopeptidase 32 352 5.2E-107 T 14-10-2018 IPR014553 Predicted aminopeptidase C4901_12865 9ca15da5af8fea88f744d63eac2675ea 141 Gene3D G3DSA:3.40.50.1010 1 139 1.1E-35 T 14-10-2018 C4901_12865 9ca15da5af8fea88f744d63eac2675ea 141 Pfam PF01850 PIN domain 3 122 7.1E-13 T 14-10-2018 IPR002716 PIN domain C4901_12865 9ca15da5af8fea88f744d63eac2675ea 141 SUPERFAMILY SSF88723 1 137 1.18E-24 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_00325 a0754e1fd8b4ee599f849c504498eec0 372 Gene3D G3DSA:3.40.50.2000 186 317 1.0E-29 T 14-10-2018 C4901_00325 a0754e1fd8b4ee599f849c504498eec0 372 Gene3D G3DSA:3.40.50.2000 32 169 3.2E-14 T 14-10-2018 C4901_00325 a0754e1fd8b4ee599f849c504498eec0 372 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 191 303 7.5E-20 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_00325 a0754e1fd8b4ee599f849c504498eec0 372 SUPERFAMILY SSF53756 32 369 4.19E-49 T 14-10-2018 C4901_04215 dd9285363806b73852fe9eefa1d6301f 200 SUPERFAMILY SSF53955 77 181 4.69E-30 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily C4901_04215 dd9285363806b73852fe9eefa1d6301f 200 Pfam PF01464 Transglycosylase SLT domain 90 179 1.3E-20 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 C4901_04215 dd9285363806b73852fe9eefa1d6301f 200 Gene3D G3DSA:1.10.530.10 82 194 4.1E-25 T 14-10-2018 C4901_07460 c73427f3b42735e2f4cbf31af6b9c208 176 Pfam PF03050 Transposase IS66 family 16 86 7.0E-9 T 14-10-2018 IPR004291 Transposase, IS66 C4901_05375 79067eeb4fef91fbc4d262b2188362e4 285 Pfam PF04333 MlaA lipoprotein 35 226 2.1E-66 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_05375 79067eeb4fef91fbc4d262b2188362e4 285 PRINTS PR01805 VacJ lipoprotein signature 103 120 5.2E-24 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_05375 79067eeb4fef91fbc4d262b2188362e4 285 PRINTS PR01805 VacJ lipoprotein signature 52 68 5.2E-24 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_05375 79067eeb4fef91fbc4d262b2188362e4 285 PRINTS PR01805 VacJ lipoprotein signature 35 48 5.2E-24 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_05375 79067eeb4fef91fbc4d262b2188362e4 285 PRINTS PR01805 VacJ lipoprotein signature 139 156 5.2E-24 T 14-10-2018 IPR007428 MlaA lipoprotein GO:0016020 C4901_05425 99ebbbac0f25a2e2b258183fef123806 339 TIGRFAM TIGR03476 HpnL: putative membrane protein 15 323 1.3E-77 T 14-10-2018 C4901_05425 99ebbbac0f25a2e2b258183fef123806 339 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 23 314 7.5E-25 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD C4901_05445 3a7a3a3af998673d85c6124744cfe553 301 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 32 283 2.1E-49 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region C4901_05445 3a7a3a3af998673d85c6124744cfe553 301 SUPERFAMILY SSF63829 5 296 2.62E-60 T 14-10-2018 C4901_05445 3a7a3a3af998673d85c6124744cfe553 301 Gene3D G3DSA:2.120.10.30 4 300 1.6E-99 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like C4901_07450 4bf9768106e6da67af25981aa1278909 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 85 105 5.2E-12 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C4901_07450 4bf9768106e6da67af25981aa1278909 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 314 338 5.2E-12 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C4901_07450 4bf9768106e6da67af25981aa1278909 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 281 302 5.2E-12 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C4901_07450 4bf9768106e6da67af25981aa1278909 453 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 390 405 5.2E-12 T 14-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 C4901_07450 4bf9768106e6da67af25981aa1278909 453 Pfam PF13437 HlyD family secretion protein 269 393 1.0E-11 T 14-10-2018 C4901_17075 34d45fde130cfcf035bd30b299b29208 219 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 96 116 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_17075 34d45fde130cfcf035bd30b299b29208 219 Pfam PF07963 Prokaryotic N-terminal methylation motif 94 117 5.8E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_17075 34d45fde130cfcf035bd30b299b29208 219 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 96 116 7.2E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_09095 8e3ea54d050ea1f14094531c2d081065 150 Gene3D G3DSA:3.40.50.300 1 105 1.1E-6 T 14-10-2018 C4901_06790 4ae95286195a240fcce2c6bfd5c99d7f 110 PIRSF PIRSF006223 3 110 4.0E-46 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C4901_06790 4ae95286195a240fcce2c6bfd5c99d7f 110 SUPERFAMILY SSF69721 2 110 1.11E-42 T 14-10-2018 IPR025526 DsrC-like domain superfamily C4901_06790 4ae95286195a240fcce2c6bfd5c99d7f 110 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 110 1.3E-49 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C4901_06790 4ae95286195a240fcce2c6bfd5c99d7f 110 Gene3D G3DSA:3.30.1420.10 2 39 1.7E-14 T 14-10-2018 C4901_06790 4ae95286195a240fcce2c6bfd5c99d7f 110 Pfam PF04358 DsrC like protein 4 110 3.7E-46 T 14-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE C4901_06790 4ae95286195a240fcce2c6bfd5c99d7f 110 Gene3D G3DSA:1.10.10.370 40 110 1.1E-34 T 14-10-2018 C4901_08375 d1b81477a2d16f74b97782f74658d967 187 Gene3D G3DSA:3.40.50.880 1 184 3.9E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_08375 d1b81477a2d16f74b97782f74658d967 187 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 179 1.8E-49 T 14-10-2018 IPR006286 Deglycase PfpI C4901_08375 d1b81477a2d16f74b97782f74658d967 187 Pfam PF01965 DJ-1/PfpI family 8 175 1.4E-51 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 C4901_08375 d1b81477a2d16f74b97782f74658d967 187 SUPERFAMILY SSF52317 7 179 5.84E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_00225 c6161a4b5978f5abcfc43996255a7652 315 Gene3D G3DSA:2.40.420.20 242 311 7.9E-31 T 14-10-2018 C4901_00225 c6161a4b5978f5abcfc43996255a7652 315 Gene3D G3DSA:2.40.30.170 31 241 7.9E-31 T 14-10-2018 C4901_00225 c6161a4b5978f5abcfc43996255a7652 315 Gene3D G3DSA:2.40.50.100 39 170 7.9E-31 T 14-10-2018 C4901_00225 c6161a4b5978f5abcfc43996255a7652 315 SUPERFAMILY SSF111369 33 184 1.96E-10 T 14-10-2018 C4901_00225 c6161a4b5978f5abcfc43996255a7652 315 Gene3D G3DSA:1.10.287.470 73 132 7.9E-31 T 14-10-2018 C4901_00225 c6161a4b5978f5abcfc43996255a7652 315 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 29 313 5.0E-34 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 C4901_14755 3f3ee34a6eb9e920b5ed39b1a167f05f 131 Gene3D G3DSA:3.40.50.2300 6 124 3.4E-7 T 14-10-2018 C4901_14755 3f3ee34a6eb9e920b5ed39b1a167f05f 131 SUPERFAMILY SSF52172 4 122 6.01E-9 T 14-10-2018 IPR011006 CheY-like superfamily C4901_07435 d4c016eefcd6f4ab2059e84056026b07 193 Pfam PF14235 Domain of unknown function (DUF4337) 30 189 4.3E-36 T 14-10-2018 IPR025570 Protein of unknown function DUF4337 C4901_04275 246a394ee67bb29d2b55b89aba45505b 234 Pfam PF00117 Glutamine amidotransferase class-I 19 180 1.5E-11 T 14-10-2018 IPR017926 Glutamine amidotransferase C4901_04275 246a394ee67bb29d2b55b89aba45505b 234 SUPERFAMILY SSF52317 15 231 1.35E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_04275 246a394ee67bb29d2b55b89aba45505b 234 Gene3D G3DSA:3.40.50.880 1 233 4.3E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like C4901_02375 db1633a2b8b43d64f9fcf1f3c2da4f5b 260 SUPERFAMILY SSF69572 14 256 9.16E-71 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 C4901_02375 db1633a2b8b43d64f9fcf1f3c2da4f5b 260 Gene3D G3DSA:3.40.50.720 13 260 5.6E-78 T 14-10-2018 C4901_02375 db1633a2b8b43d64f9fcf1f3c2da4f5b 260 Pfam PF00899 ThiF family 30 254 1.0E-50 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 C4901_05310 50be3a740adcc49ae8664a2a479608b0 64 Pfam PF14236 Domain of unknown function (DUF4338) 1 60 2.1E-17 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_07580 50be3a740adcc49ae8664a2a479608b0 64 Pfam PF14236 Domain of unknown function (DUF4338) 1 60 2.1E-17 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_06175 50be3a740adcc49ae8664a2a479608b0 64 Pfam PF14236 Domain of unknown function (DUF4338) 1 60 2.1E-17 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_16645 50be3a740adcc49ae8664a2a479608b0 64 Pfam PF14236 Domain of unknown function (DUF4338) 1 60 2.1E-17 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_08640 50be3a740adcc49ae8664a2a479608b0 64 Pfam PF14236 Domain of unknown function (DUF4338) 1 60 2.1E-17 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_03755 50be3a740adcc49ae8664a2a479608b0 64 Pfam PF14236 Domain of unknown function (DUF4338) 1 60 2.1E-17 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_00065 50be3a740adcc49ae8664a2a479608b0 64 Pfam PF14236 Domain of unknown function (DUF4338) 1 60 2.1E-17 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_01890 46934515d7ebaa4754797279f37b25f0 299 PIRSF PIRSF003097 2 296 1.9E-55 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 C4901_02340 af8095de6cf5daf79c37e3d3f6b9b3b5 163 Gene3D G3DSA:3.10.580.10 1 155 2.2E-35 T 14-10-2018 C4901_02340 af8095de6cf5daf79c37e3d3f6b9b3b5 163 Pfam PF00571 CBS domain 88 141 5.8E-9 T 14-10-2018 IPR000644 CBS domain C4901_02340 af8095de6cf5daf79c37e3d3f6b9b3b5 163 Pfam PF00571 CBS domain 3 57 9.4E-13 T 14-10-2018 IPR000644 CBS domain C4901_02340 af8095de6cf5daf79c37e3d3f6b9b3b5 163 SUPERFAMILY SSF54631 1 141 1.52E-31 T 14-10-2018 C4901_02340 af8095de6cf5daf79c37e3d3f6b9b3b5 163 SMART SM00116 95 142 6.7E-6 T 14-10-2018 IPR000644 CBS domain C4901_02340 af8095de6cf5daf79c37e3d3f6b9b3b5 163 SMART SM00116 10 58 5.0E-9 T 14-10-2018 IPR000644 CBS domain C4901_09135 4963a09ca93aa53fca9e109fff472af0 302 Pfam PF06114 IrrE N-terminal-like domain 161 293 1.1E-21 T 14-10-2018 IPR010359 IrrE N-terminal-like domain C4901_09135 4963a09ca93aa53fca9e109fff472af0 302 Gene3D G3DSA:3.40.390.50 130 259 2.2E-5 T 14-10-2018 C4901_00620 729865cb8a219751ec7afd3b86ad4e55 225 Pfam PF14236 Domain of unknown function (DUF4338) 4 31 1.2E-6 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_00620 729865cb8a219751ec7afd3b86ad4e55 225 Pfam PF14236 Domain of unknown function (DUF4338) 35 94 2.6E-14 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_00620 729865cb8a219751ec7afd3b86ad4e55 225 Pfam PF13808 DDE_Tnp_1-associated 122 214 9.3E-23 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_16800 2dcad849e1f85ca0069e05ceebc46041 430 Pfam PF02803 Thiolase, C-terminal domain 289 425 1.8E-35 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 C4901_16800 2dcad849e1f85ca0069e05ceebc46041 430 ProSitePatterns PS00099 Thiolases active site. 408 421 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 C4901_16800 2dcad849e1f85ca0069e05ceebc46041 430 ProSitePatterns PS00737 Thiolases signature 2. 373 389 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 C4901_16800 2dcad849e1f85ca0069e05ceebc46041 430 Pfam PF00108 Thiolase, N-terminal domain 5 278 1.5E-63 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 C4901_16800 2dcad849e1f85ca0069e05ceebc46041 430 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 424 4.5E-127 T 14-10-2018 IPR002155 Thiolase GO:0016747 C4901_16800 2dcad849e1f85ca0069e05ceebc46041 430 PIRSF PIRSF000429 1 427 1.2E-122 T 14-10-2018 IPR002155 Thiolase GO:0016747 C4901_16800 2dcad849e1f85ca0069e05ceebc46041 430 SUPERFAMILY SSF53901 2 283 1.95E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_16800 2dcad849e1f85ca0069e05ceebc46041 430 SUPERFAMILY SSF53901 290 424 4.38E-32 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_04670 98cd8adeed66590e3cc404ed321672b9 127 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 14 101 3.0E-11 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C4901_04670 98cd8adeed66590e3cc404ed321672b9 127 Gene3D G3DSA:3.30.300.20 8 122 8.9E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta C4901_04670 98cd8adeed66590e3cc404ed321672b9 127 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 10 116 5.1E-23 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C4901_04670 98cd8adeed66590e3cc404ed321672b9 127 Pfam PF02033 Ribosome-binding factor A 11 114 4.1E-20 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C4901_04670 98cd8adeed66590e3cc404ed321672b9 127 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 10 114 20.973 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 C4901_04670 98cd8adeed66590e3cc404ed321672b9 127 SUPERFAMILY SSF89919 8 117 2.62E-24 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily C4901_04670 98cd8adeed66590e3cc404ed321672b9 127 ProSitePatterns PS01319 Ribosome-binding factor A signature. 80 101 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 C4901_14555 f9855329b9b85399f5bc048ebced6f9c 187 Pfam PF02622 Uncharacterized ACR, COG1678 16 174 5.8E-51 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 C4901_14555 f9855329b9b85399f5bc048ebced6f9c 187 Gene3D G3DSA:3.40.1740.10 3 187 1.1E-68 T 14-10-2018 C4901_14555 f9855329b9b85399f5bc048ebced6f9c 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 5 187 37.961 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 C4901_14555 f9855329b9b85399f5bc048ebced6f9c 187 SUPERFAMILY SSF143456 5 187 2.62E-64 T 14-10-2018 C4901_04615 d033633df6011d8ebfb9ed1c4a18b2d0 498 Pfam PF00361 Proton-conducting membrane transporter 134 418 2.0E-80 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04615 d033633df6011d8ebfb9ed1c4a18b2d0 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 5.2E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04615 d033633df6011d8ebfb9ed1c4a18b2d0 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 169 193 5.2E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04615 d033633df6011d8ebfb9ed1c4a18b2d0 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 5.2E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04615 d033633df6011d8ebfb9ed1c4a18b2d0 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 5.2E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04615 d033633df6011d8ebfb9ed1c4a18b2d0 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 5.2E-48 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04615 d033633df6011d8ebfb9ed1c4a18b2d0 498 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 9 486 6.4E-182 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_16375 d3c21edecc6e6f89a7be5b4c38122b51 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 273 3.0E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 C4901_16375 d3c21edecc6e6f89a7be5b4c38122b51 276 SUPERFAMILY SSF161098 79 264 1.83E-21 T 14-10-2018 IPR035906 MetI-like superfamily C4901_16375 d3c21edecc6e6f89a7be5b4c38122b51 276 Gene3D G3DSA:1.10.3720.10 80 274 3.0E-15 T 14-10-2018 IPR035906 MetI-like superfamily C4901_14775 4a240a162d572c44abf962516733516e 70 Gene3D G3DSA:2.40.50.240 1 67 8.5E-30 T 14-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily C4901_14775 4a240a162d572c44abf962516733516e 70 Pfam PF06988 NifT/FixU protein 1 64 2.2E-30 T 14-10-2018 IPR009727 NifT/FixU GO:0009399 C4901_14775 4a240a162d572c44abf962516733516e 70 TIGRFAM TIGR02934 nifT_nitrog: probable nitrogen fixation protein FixT 1 67 5.2E-33 T 14-10-2018 IPR009727 NifT/FixU GO:0009399 C4901_14775 4a240a162d572c44abf962516733516e 70 SUPERFAMILY SSF159203 1 67 6.93E-25 T 14-10-2018 IPR024044 NifT/FixU barrel-like domain superfamily C4901_12560 43e2cdca76ff724fe1814122d7d73017 103 SUPERFAMILY SSF54913 8 100 8.45E-20 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C4901_12560 43e2cdca76ff724fe1814122d7d73017 103 Gene3D G3DSA:3.30.70.120 4 103 1.7E-20 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C4901_12560 43e2cdca76ff724fe1814122d7d73017 103 Pfam PF02641 Uncharacterized ACR, COG1993 8 96 4.6E-19 T 14-10-2018 IPR003793 Domain of unknown function DUF190 C4901_11880 88f96be39a9f9c9c24ef6f95d3fe90ea 206 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 8 206 25.03 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 C4901_11880 88f96be39a9f9c9c24ef6f95d3fe90ea 206 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 26 198 1.7E-18 T 14-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 C4901_11880 88f96be39a9f9c9c24ef6f95d3fe90ea 206 Gene3D G3DSA:2.50.20.10 26 205 1.2E-42 T 14-10-2018 C4901_11880 88f96be39a9f9c9c24ef6f95d3fe90ea 206 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 34 195 4.9E-39 T 14-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like C4901_11880 88f96be39a9f9c9c24ef6f95d3fe90ea 206 SUPERFAMILY SSF89392 27 204 2.43E-40 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX C4901_09950 d5412400c4e35a87142030818a03595a 435 Pfam PF04285 Protein of unknown function (DUF444) 4 427 1.6E-133 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 C4901_13490 881f2a8ae4ff6eb2ffa197e124e26d34 948 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 631 926 6.5E-24 T 14-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 C4901_04370 dfa64ae49f9441c175cfae321da755a2 136 SUPERFAMILY SSF88723 1 132 3.08E-32 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_04370 dfa64ae49f9441c175cfae321da755a2 136 Gene3D G3DSA:3.40.50.1010 3 132 7.9E-35 T 14-10-2018 C4901_04370 dfa64ae49f9441c175cfae321da755a2 136 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 130 11.247 T 14-10-2018 IPR022907 VapC family GO:0004540 C4901_04370 dfa64ae49f9441c175cfae321da755a2 136 Pfam PF01850 PIN domain 5 119 1.4E-14 T 14-10-2018 IPR002716 PIN domain C4901_14610 af4fc0ae6c27dbe0af15179548a9ee4c 190 Pfam PF02325 YGGT family 108 176 4.2E-15 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 C4901_14610 af4fc0ae6c27dbe0af15179548a9ee4c 190 Pfam PF02325 YGGT family 14 81 6.9E-17 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 C4901_13845 3347df3a3a69d90febfe52c6c94fb252 213 Pfam PF04367 Protein of unknown function (DUF502) 59 164 6.0E-34 T 14-10-2018 IPR007462 Protein of unknown function DUF502 C4901_07490 6108a72c1270f80cbf1e45ab4f771df0 338 SUPERFAMILY SSF53098 194 320 4.25E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_07490 6108a72c1270f80cbf1e45ab4f771df0 338 Gene3D G3DSA:3.30.420.10 185 323 5.7E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_07490 6108a72c1270f80cbf1e45ab4f771df0 338 Pfam PF00665 Integrase core domain 192 300 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_09725 a75e55d35ecdb13bf29a34174c340252 106 Gene3D G3DSA:1.10.443.10 3 105 8.3E-7 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 C4901_09725 a75e55d35ecdb13bf29a34174c340252 106 SUPERFAMILY SSF56349 20 102 4.71E-10 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_11860 a633ca19c1a7dbbbf37933c269a47451 208 Gene3D G3DSA:3.10.560.10 112 204 1.8E-11 T 14-10-2018 C4901_11860 a633ca19c1a7dbbbf37933c269a47451 208 Pfam PF10531 SLBB domain 124 168 7.7E-10 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_11860 a633ca19c1a7dbbbf37933c269a47451 208 Pfam PF02563 Polysaccharide biosynthesis/export protein 41 112 1.7E-21 T 14-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 C4901_11860 a633ca19c1a7dbbbf37933c269a47451 208 Gene3D G3DSA:3.30.1950.10 47 111 2.6E-13 T 14-10-2018 C4901_12420 00dce55eb7064a9fef0483a642429378 87 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 16 84 4.3E-24 T 14-10-2018 IPR018720 Domain of unknown function DUF2249 C4901_14315 37f86a8bc00b7a30fcb980c5d26f0ca6 395 Gene3D G3DSA:2.40.160.10 13 395 1.5E-35 T 14-10-2018 IPR023614 Porin domain superfamily C4901_14315 37f86a8bc00b7a30fcb980c5d26f0ca6 395 SUPERFAMILY SSF56935 25 395 2.35E-27 T 14-10-2018 C4901_14315 37f86a8bc00b7a30fcb980c5d26f0ca6 395 Pfam PF13609 Gram-negative porin 11 365 4.2E-30 T 14-10-2018 C4901_15225 d71c93f7cce53d18c5df07b1e983c519 84 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 11 61 6.1E-14 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system C4901_05720 c820e877d37a678f14b52de85214d881 932 SUPERFAMILY SSF48452 345 478 4.74E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_05720 c820e877d37a678f14b52de85214d881 932 Gene3D G3DSA:1.25.40.10 316 547 4.2E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_05720 c820e877d37a678f14b52de85214d881 932 Pfam PF13429 Tetratricopeptide repeat 202 477 2.3E-55 T 14-10-2018 C4901_16850 e87a9749803e7b3c50760d7ba3203da8 67 Gene3D G3DSA:3.40.50.1010 1 60 7.1E-5 T 14-10-2018 C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 65 77 7.3E-29 T 14-10-2018 IPR003004 GspF/PilC family C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 367 381 7.3E-29 T 14-10-2018 IPR003004 GspF/PilC family C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 164 192 7.3E-29 T 14-10-2018 IPR003004 GspF/PilC family C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 PRINTS PR00812 Bacterial general secretion pathway protein F signature 383 402 7.3E-29 T 14-10-2018 IPR003004 GspF/PilC family C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 Gene3D G3DSA:1.20.81.30 54 171 3.6E-32 T 14-10-2018 C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 Gene3D G3DSA:1.20.81.30 255 363 4.6E-24 T 14-10-2018 C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 402 4.6E-146 T 14-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 Pfam PF00482 Type II secretion system (T2SS), protein F 274 394 3.2E-25 T 14-10-2018 IPR018076 Type II secretion system F domain C4901_04965 bf5cca1075699b4c66230d3b0f2f4a3d 403 Pfam PF00482 Type II secretion system (T2SS), protein F 70 192 1.1E-31 T 14-10-2018 IPR018076 Type II secretion system F domain C4901_13870 e92047d02fc561211d6cae623afec8c6 168 SUPERFAMILY SSF54631 1 147 1.89E-36 T 14-10-2018 C4901_13870 e92047d02fc561211d6cae623afec8c6 168 SMART SM00116 10 58 1.6E-6 T 14-10-2018 IPR000644 CBS domain C4901_13870 e92047d02fc561211d6cae623afec8c6 168 SMART SM00116 95 142 2.4E-9 T 14-10-2018 IPR000644 CBS domain C4901_13870 e92047d02fc561211d6cae623afec8c6 168 Gene3D G3DSA:3.10.580.10 1 161 1.1E-37 T 14-10-2018 C4901_13870 e92047d02fc561211d6cae623afec8c6 168 Pfam PF00571 CBS domain 3 57 6.5E-12 T 14-10-2018 IPR000644 CBS domain C4901_13870 e92047d02fc561211d6cae623afec8c6 168 Pfam PF00571 CBS domain 88 141 2.4E-10 T 14-10-2018 IPR000644 CBS domain C4901_09815 acbde90a66402b80a96a5a589a83e3d1 240 Pfam PF13280 WYL domain 138 227 5.0E-18 T 14-10-2018 IPR026881 WYL domain C4901_09815 acbde90a66402b80a96a5a589a83e3d1 240 Pfam PF08279 HTH domain 6 60 5.6E-14 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 C4901_09815 acbde90a66402b80a96a5a589a83e3d1 240 Gene3D G3DSA:1.10.10.10 1 64 1.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_09815 acbde90a66402b80a96a5a589a83e3d1 240 SUPERFAMILY SSF46785 1 61 1.72E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_12935 ff2408353e780e94f702b6b4957f5675 385 Pfam PF04055 Radical SAM superfamily 69 212 6.1E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 C4901_12935 ff2408353e780e94f702b6b4957f5675 385 Gene3D G3DSA:3.20.20.70 51 310 4.1E-11 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_12935 ff2408353e780e94f702b6b4957f5675 385 SMART SM00729 60 264 0.0037 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 C4901_12935 ff2408353e780e94f702b6b4957f5675 385 SUPERFAMILY SSF102114 55 282 1.31E-20 T 14-10-2018 C4901_13375 eace4551a4997ca66b10bdbfdbc50755 315 Pfam PF06516 Purine nucleoside permease (NUP) 32 312 6.2E-43 T 14-10-2018 IPR009486 Purine nucleoside permease GO:0055085 C4901_13375 eace4551a4997ca66b10bdbfdbc50755 315 Gene3D G3DSA:3.40.50.1580 33 314 1.4E-20 T 14-10-2018 C4901_13375 eace4551a4997ca66b10bdbfdbc50755 315 SUPERFAMILY SSF53167 37 279 4.45E-14 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 C4901_05730 b34df0e974c45fd89b2f1c05943e68bf 937 Pfam PF03537 Glycoside-hydrolase family GH114 62 266 1.2E-15 T 14-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain C4901_05730 b34df0e974c45fd89b2f1c05943e68bf 937 PIRSF PIRSF029570 6 934 1.6E-229 T 14-10-2018 IPR016925 Uncharacterised conserved protein UCP029570 C4901_05730 b34df0e974c45fd89b2f1c05943e68bf 937 Gene3D G3DSA:3.20.20.70 42 278 1.4E-13 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_05730 b34df0e974c45fd89b2f1c05943e68bf 937 SUPERFAMILY SSF51445 28 279 1.12E-25 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily C4901_02005 75e41a576741b06998b1dbdd4378cd06 378 TIGRFAM TIGR02584 cas_NE0113: CRISPR-associated protein, NE0113 family 10 211 6.4E-72 T 14-10-2018 IPR013413 CRISPR-associated protein, NE0113 C4901_02005 75e41a576741b06998b1dbdd4378cd06 378 Pfam PF09623 CRISPR-associated protein NE0113 (Cas_NE0113) 18 233 4.9E-56 T 14-10-2018 IPR019092 CRISPR-assoc protein, NE0113/Csx13 C4901_13190 8fd5ea07ae4f4ea23c7b4efa94f2363c 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.3E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_13190 8fd5ea07ae4f4ea23c7b4efa94f2363c 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 25 1.4E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_13190 8fd5ea07ae4f4ea23c7b4efa94f2363c 146 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_01740 73d13e4f2efd7ec3b3389776a7ff3d83 144 Pfam PF07963 Prokaryotic N-terminal methylation motif 19 43 6.8E-6 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_01740 73d13e4f2efd7ec3b3389776a7ff3d83 144 SUPERFAMILY SSF54523 26 119 8.63E-6 T 14-10-2018 C4901_01740 73d13e4f2efd7ec3b3389776a7ff3d83 144 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 23 43 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_01740 73d13e4f2efd7ec3b3389776a7ff3d83 144 Gene3D G3DSA:3.30.700.10 26 143 1.1E-5 T 14-10-2018 C4901_00275 4dd225f144d35d8ca2de49444cd2f26f 255 SUPERFAMILY SSF53448 3 147 1.44E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_00275 4dd225f144d35d8ca2de49444cd2f26f 255 Pfam PF00535 Glycosyl transferase family 2 4 98 6.3E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 C4901_00275 4dd225f144d35d8ca2de49444cd2f26f 255 Gene3D G3DSA:3.90.550.10 1 190 4.1E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases C4901_09025 74e27df981ac21255bee50ac553a3a0d 139 Gene3D G3DSA:2.160.20.10 2 137 3.5E-9 T 14-10-2018 IPR012334 Pectin lyase fold C4901_09025 74e27df981ac21255bee50ac553a3a0d 139 SUPERFAMILY SSF51126 12 136 4.57E-10 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C4901_03035 e2355ef75c1c758b546131f2ab599064 531 Pfam PF01370 NAD dependent epimerase/dehydratase family 216 387 4.0E-16 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 C4901_03035 e2355ef75c1c758b546131f2ab599064 531 Gene3D G3DSA:3.40.50.720 214 519 4.3E-40 T 14-10-2018 C4901_03035 e2355ef75c1c758b546131f2ab599064 531 SUPERFAMILY SSF51735 215 518 2.69E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_06470 1705d9bf26306c385424322abdb4319b 233 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 9 113 3.2E-7 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system C4901_10600 396e5ca6f0bc388aa1723d42e2fab7d2 138 Pfam PF12732 YtxH-like protein 35 104 1.8E-10 T 14-10-2018 IPR024623 Uncharacterised protein family YtxH C4901_00420 53d43e2235939527260c76637d84ffc0 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 1.8E-38 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C4901_00420 53d43e2235939527260c76637d84ffc0 108 PRINTS PR00421 Thioredoxin family signature 32 41 7.7E-10 T 14-10-2018 C4901_00420 53d43e2235939527260c76637d84ffc0 108 PRINTS PR00421 Thioredoxin family signature 24 32 7.7E-10 T 14-10-2018 C4901_00420 53d43e2235939527260c76637d84ffc0 108 PRINTS PR00421 Thioredoxin family signature 72 83 7.7E-10 T 14-10-2018 C4901_00420 53d43e2235939527260c76637d84ffc0 108 Gene3D G3DSA:3.40.30.10 1 108 1.1E-35 T 14-10-2018 C4901_00420 53d43e2235939527260c76637d84ffc0 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 C4901_00420 53d43e2235939527260c76637d84ffc0 108 PIRSF PIRSF000077 2 108 9.3E-44 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 C4901_00420 53d43e2235939527260c76637d84ffc0 108 Pfam PF00085 Thioredoxin 5 106 2.5E-34 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 C4901_00420 53d43e2235939527260c76637d84ffc0 108 SUPERFAMILY SSF52833 2 108 1.74E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_15025 994b18ada57ffa7f0e954a98c4580b47 335 Pfam PF11231 Protein of unknown function (DUF3034) 55 332 3.0E-92 T 14-10-2018 IPR021393 Protein of unknown function DUF3034 C4901_15585 56defcbd8c02dc622183ce5e54980019 79 SUPERFAMILY SSF51735 2 63 3.69E-6 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_15585 56defcbd8c02dc622183ce5e54980019 79 Gene3D G3DSA:3.40.50.720 1 74 1.8E-6 T 14-10-2018 C4901_01870 b38f024f7e85c09d76f5cc0c8ca6e1f7 406 SUPERFAMILY SSF55681 115 394 2.9E-20 T 14-10-2018 C4901_01870 b38f024f7e85c09d76f5cc0c8ca6e1f7 406 Gene3D G3DSA:3.30.930.10 107 406 5.8E-86 T 14-10-2018 C4901_06950 4ba9391220021bb15bee6c6e90de3e57 207 Pfam PF13835 Domain of unknown function (DUF4194) 18 182 1.8E-48 T 14-10-2018 IPR025449 Protein of unknown function DUF4194 C4901_02660 aaec4d19a2ff9666f6f825229774a1a8 206 Gene3D G3DSA:3.90.79.10 10 134 8.0E-14 T 14-10-2018 C4901_02660 aaec4d19a2ff9666f6f825229774a1a8 206 SUPERFAMILY SSF55811 8 132 5.41E-10 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_02660 aaec4d19a2ff9666f6f825229774a1a8 206 SUPERFAMILY SSF46785 135 200 1.74E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_02660 aaec4d19a2ff9666f6f825229774a1a8 206 Gene3D G3DSA:1.10.10.10 135 203 1.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_07230 4716df3a73741df1bbd977e29cf66a98 136 Pfam PF03733 Inner membrane component domain 76 125 3.2E-15 T 14-10-2018 IPR005185 Inner membrane component domain C4901_07230 4716df3a73741df1bbd977e29cf66a98 136 Pfam PF03733 Inner membrane component domain 5 55 2.6E-14 T 14-10-2018 IPR005185 Inner membrane component domain C4901_07230 4716df3a73741df1bbd977e29cf66a98 136 PIRSF PIRSF028777 2 136 5.5E-47 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 C4901_15595 62214cafccf219513315703434e5f4d8 86 SUPERFAMILY SSF51735 9 73 5.97E-17 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_15595 62214cafccf219513315703434e5f4d8 86 Pfam PF00106 short chain dehydrogenase 15 71 8.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR C4901_15595 62214cafccf219513315703434e5f4d8 86 Gene3D G3DSA:3.40.50.720 2 76 1.9E-16 T 14-10-2018 C4901_09165 fceb9a4fbd2e9a31635924b998c6c508 555 Pfam PF03050 Transposase IS66 family 196 478 4.2E-58 T 14-10-2018 IPR004291 Transposase, IS66 C4901_06330 fceb9a4fbd2e9a31635924b998c6c508 555 Pfam PF03050 Transposase IS66 family 196 478 4.2E-58 T 14-10-2018 IPR004291 Transposase, IS66 C4901_08965 9e996d58f020923e1f6356e428882d7c 358 Gene3D G3DSA:3.40.50.2000 7 172 1.7E-20 T 14-10-2018 C4901_08965 9e996d58f020923e1f6356e428882d7c 358 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 13 346 5.7E-40 T 14-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 C4901_08965 9e996d58f020923e1f6356e428882d7c 358 SUPERFAMILY SSF53756 10 347 4.6E-78 T 14-10-2018 C4901_08965 9e996d58f020923e1f6356e428882d7c 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 83 325 4.8E-32 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_08965 9e996d58f020923e1f6356e428882d7c 358 Gene3D G3DSA:3.40.50.2000 178 350 8.0E-44 T 14-10-2018 C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 SMART SM00710 142 167 720.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 SMART SM00710 58 80 31.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 SMART SM00710 29 57 20.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 SMART SM00710 175 211 7700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 SMART SM00710 119 140 7200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 SMART SM00710 82 104 130.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 Gene3D G3DSA:2.160.20.10 13 300 8.0E-26 T 14-10-2018 IPR012334 Pectin lyase fold C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 SUPERFAMILY SSF51126 23 299 5.86E-25 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 Pfam PF13229 Right handed beta helix region 31 106 2.8E-7 T 14-10-2018 IPR039448 Right handed beta helix domain C4901_03235 5b9d3a445ed0421eec1b29f3364072b9 302 Pfam PF13229 Right handed beta helix region 117 217 1.2E-5 T 14-10-2018 IPR039448 Right handed beta helix domain C4901_16060 f24e5fc837612d21aa9bac7f5e5da892 134 Pfam PF01850 PIN domain 4 122 3.4E-8 T 14-10-2018 IPR002716 PIN domain C4901_16060 f24e5fc837612d21aa9bac7f5e5da892 134 Gene3D G3DSA:3.40.50.1010 2 129 1.5E-11 T 14-10-2018 C4901_16060 f24e5fc837612d21aa9bac7f5e5da892 134 SUPERFAMILY SSF88723 1 125 6.73E-17 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 Pfam PF05593 RHS Repeat 2 32 3.5E-7 T 14-10-2018 IPR031325 RHS repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 Pfam PF05593 RHS Repeat 528 562 3.8E-6 T 14-10-2018 IPR031325 RHS repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 Pfam PF05593 RHS Repeat 265 301 1.3E-9 T 14-10-2018 IPR031325 RHS repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 Pfam PF05593 RHS Repeat 370 407 1.0E-8 T 14-10-2018 IPR031325 RHS repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 Pfam PF05593 RHS Repeat 308 345 4.5E-11 T 14-10-2018 IPR031325 RHS repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 Pfam PF05593 RHS Repeat 354 385 9.0E-6 T 14-10-2018 IPR031325 RHS repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 Pfam PF05593 RHS Repeat 244 281 4.7E-9 T 14-10-2018 IPR031325 RHS repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 702 737 0.0023 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 2 38 9.5E-9 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 265 301 2.8E-10 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 775 810 2.6E-5 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 392 432 7.1E-4 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 354 389 1.9E-7 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 308 347 9.1E-10 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 437 462 0.0019 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 244 282 3.2E-11 T 14-10-2018 IPR006530 YD repeat C4901_13115 a3a8d1efb49920cfc0d4b298e0f43144 908 Gene3D G3DSA:3.90.930.1 227 355 4.2E-16 T 14-10-2018 C4901_08335 78a7e43a539dc81c3e15819164d8d2d2 289 Gene3D G3DSA:2.40.50.100 58 91 2.7E-5 T 14-10-2018 C4901_08335 78a7e43a539dc81c3e15819164d8d2d2 289 Gene3D G3DSA:2.40.30.170 140 207 5.8E-20 T 14-10-2018 C4901_08335 78a7e43a539dc81c3e15819164d8d2d2 289 Pfam PF13533 Biotin-lipoyl like 62 95 3.0E-5 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain C4901_08335 78a7e43a539dc81c3e15819164d8d2d2 289 Gene3D G3DSA:2.40.420.20 208 281 5.8E-20 T 14-10-2018 C4901_08335 78a7e43a539dc81c3e15819164d8d2d2 289 Gene3D G3DSA:2.40.50.100 104 139 5.8E-20 T 14-10-2018 C4901_08335 78a7e43a539dc81c3e15819164d8d2d2 289 SUPERFAMILY SSF51230 55 132 4.28E-6 T 14-10-2018 IPR011053 Single hybrid motif C4901_15095 a549917917ed3c7440c11b4491b64bbb 84 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 10 57 4.1E-11 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system C4901_03640 12ff22eed2930c65f9fcd0889690a14b 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 32 47 7.4E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_03640 12ff22eed2930c65f9fcd0889690a14b 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 19 30 7.4E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_03640 12ff22eed2930c65f9fcd0889690a14b 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 7.4E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_03640 12ff22eed2930c65f9fcd0889690a14b 110 SUPERFAMILY SSF46785 2 76 7.27E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily C4901_03640 12ff22eed2930c65f9fcd0889690a14b 110 Gene3D G3DSA:1.10.10.10 1 80 3.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily C4901_03640 12ff22eed2930c65f9fcd0889690a14b 110 SMART SM00418 1 79 1.3E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_03640 12ff22eed2930c65f9fcd0889690a14b 110 Pfam PF01022 Bacterial regulatory protein, arsR family 6 49 2.0E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 C4901_05855 5631a352923fa800e6659bbaf0e1bad7 295 PRINTS PR00412 Epoxide hydrolase signature 35 53 1.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C4901_05855 5631a352923fa800e6659bbaf0e1bad7 295 PRINTS PR00412 Epoxide hydrolase signature 55 70 1.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C4901_05855 5631a352923fa800e6659bbaf0e1bad7 295 PRINTS PR00412 Epoxide hydrolase signature 288 295 1.2E-5 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 C4901_05855 5631a352923fa800e6659bbaf0e1bad7 295 Gene3D G3DSA:3.40.50.1820 2 289 3.0E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_05855 5631a352923fa800e6659bbaf0e1bad7 295 Pfam PF00561 alpha/beta hydrolase fold 30 275 3.2E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 C4901_05855 5631a352923fa800e6659bbaf0e1bad7 295 SUPERFAMILY SSF53474 5 287 3.1E-45 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_10580 2faa6af9b5a5e055a97086cff43961de 127 Pfam PF04972 BON domain 43 110 3.0E-21 T 14-10-2018 IPR007055 BON domain C4901_10580 2faa6af9b5a5e055a97086cff43961de 127 SMART SM00749 48 111 5.8E-7 T 14-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria C4901_04720 292753e47e66369061ed358126a447c5 252 SUPERFAMILY SSF56784 1 221 3.39E-42 T 14-10-2018 IPR036412 HAD-like superfamily C4901_04720 292753e47e66369061ed358126a447c5 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 152 198 4.6E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_04720 292753e47e66369061ed358126a447c5 252 Gene3D G3DSA:1.10.150.240 16 97 9.6E-69 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 C4901_04720 292753e47e66369061ed358126a447c5 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 198 9.4E-22 T 14-10-2018 C4901_04720 292753e47e66369061ed358126a447c5 252 Gene3D G3DSA:3.40.50.1000 4 217 9.6E-69 T 14-10-2018 IPR023214 HAD superfamily C4901_04720 292753e47e66369061ed358126a447c5 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 161 181 2.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_04720 292753e47e66369061ed358126a447c5 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 110 123 2.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_04720 292753e47e66369061ed358126a447c5 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 2.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_04720 292753e47e66369061ed358126a447c5 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 2.9E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 C4901_09120 5a260cd7db7ae63193201e2155346e79 262 Pfam PF00149 Calcineurin-like phosphoesterase 1 229 3.7E-12 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C4901_09120 5a260cd7db7ae63193201e2155346e79 262 Gene3D G3DSA:3.60.21.10 1 258 2.8E-11 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like C4901_09120 5a260cd7db7ae63193201e2155346e79 262 SUPERFAMILY SSF56300 1 244 2.93E-28 T 14-10-2018 C4901_16000 3196154e1de851885a78e7753a75957e 152 SUPERFAMILY SSF52833 63 132 1.39E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_16000 3196154e1de851885a78e7753a75957e 152 Pfam PF13511 Domain of unknown function (DUF4124) 12 45 4.2E-10 T 14-10-2018 IPR025392 Domain of unknown function DUF4124 C4901_16000 3196154e1de851885a78e7753a75957e 152 Pfam PF00462 Glutaredoxin 70 128 3.5E-12 T 14-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 C4901_16000 3196154e1de851885a78e7753a75957e 152 Gene3D G3DSA:3.40.30.10 59 142 1.4E-15 T 14-10-2018 C4901_13745 502b2d541be2ef1a9f7a693b934e8ed1 364 Pfam PF01610 Transposase 197 359 1.6E-42 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_13745 502b2d541be2ef1a9f7a693b934e8ed1 364 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 82 125 2.9E-8 T 14-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger C4901_00765 106cfabece067cff067db2f8d02e96e9 281 SUPERFAMILY SSF51730 5 280 6.28E-98 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like C4901_00765 106cfabece067cff067db2f8d02e96e9 281 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 11 279 2.2E-100 T 14-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 C4901_00765 106cfabece067cff067db2f8d02e96e9 281 Pfam PF02219 Methylenetetrahydrofolate reductase 7 280 6.0E-88 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 C4901_00765 106cfabece067cff067db2f8d02e96e9 281 Gene3D G3DSA:3.20.20.220 1 281 3.2E-100 T 14-10-2018 C4901_10540 a7b25aaf48ecc06203abdbf519ca94d6 110 Gene3D G3DSA:3.30.1360.20 19 110 1.0E-30 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C4901_10540 a7b25aaf48ecc06203abdbf519ca94d6 110 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 18 107 4.9E-28 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C4901_10540 a7b25aaf48ecc06203abdbf519ca94d6 110 SUPERFAMILY SSF55248 18 108 6.67E-30 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C4901_10540 a7b25aaf48ecc06203abdbf519ca94d6 110 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 16 109 22.373 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 C4901_03165 70aa9f6f9e009a8d9313ee2bf5d7607f 252 SUPERFAMILY SSF51366 2 251 1.57E-83 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 C4901_03165 70aa9f6f9e009a8d9313ee2bf5d7607f 252 Pfam PF00977 Histidine biosynthesis protein 6 234 1.6E-89 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 C4901_03165 70aa9f6f9e009a8d9313ee2bf5d7607f 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 251 5.6E-111 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 C4901_03165 70aa9f6f9e009a8d9313ee2bf5d7607f 252 Gene3D G3DSA:3.20.20.70 1 252 4.3E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_03165 70aa9f6f9e009a8d9313ee2bf5d7607f 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 251 47.913 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 C4901_06335 12898889c584a9b0241d9f3b5d920269 766 Pfam PF07715 TonB-dependent Receptor Plug Domain 62 171 2.2E-9 T 14-10-2018 IPR012910 TonB-dependent receptor, plug domain C4901_06335 12898889c584a9b0241d9f3b5d920269 766 Pfam PF00593 TonB dependent receptor 343 754 8.2E-28 T 14-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel C4901_06335 12898889c584a9b0241d9f3b5d920269 766 Gene3D G3DSA:2.170.130.10 64 186 6.0E-10 T 14-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily C4901_06335 12898889c584a9b0241d9f3b5d920269 766 SUPERFAMILY SSF56935 61 754 5.49E-67 T 14-10-2018 C4901_12875 e5b5a2d67c0a98d7f3b46847592a4117 385 SUPERFAMILY SSF51430 41 372 1.13E-29 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C4901_12875 e5b5a2d67c0a98d7f3b46847592a4117 385 Gene3D G3DSA:3.20.20.100 39 381 3.1E-23 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C4901_12875 e5b5a2d67c0a98d7f3b46847592a4117 385 Pfam PF00248 Aldo/keto reductase family 47 226 1.1E-16 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain C4901_05710 e964540e7d9cd0e2f3c891d6b87dbeb1 442 Pfam PF16963 PelD GGDEF domain 313 427 1.1E-19 T 14-10-2018 IPR031583 PelD, GGDEF domain C4901_05710 e964540e7d9cd0e2f3c891d6b87dbeb1 442 Gene3D G3DSA:3.30.450.40 153 309 1.5E-39 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_02945 6bf3c802acad8e987bc77c4ff167caf3 131 Pfam PF01850 PIN domain 4 117 7.1E-8 T 14-10-2018 IPR002716 PIN domain C4901_02945 6bf3c802acad8e987bc77c4ff167caf3 131 SUPERFAMILY SSF88723 1 119 4.21E-15 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_11460 bbd8a8a6303ec6a5d3ad507bab38b7ea 398 SMART SM00974 281 375 4.7E-21 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding C4901_11460 bbd8a8a6303ec6a5d3ad507bab38b7ea 398 Pfam PF10544 T5orf172 domain 265 376 4.2E-10 T 14-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding C4901_12640 7aaf630295f6714d16cb258b112b0784 92 Gene3D G3DSA:3.40.1440.10 1 90 3.6E-28 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 C4901_12640 7aaf630295f6714d16cb258b112b0784 92 SUPERFAMILY SSF82771 4 72 1.2E-12 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 C4901_12640 7aaf630295f6714d16cb258b112b0784 92 Pfam PF01541 GIY-YIG catalytic domain 5 71 1.8E-15 T 14-10-2018 IPR000305 GIY-YIG endonuclease C4901_12235 8af8c7072b915af10b08bff376e626ac 269 Gene3D G3DSA:3.30.1370.140 32 129 3.9E-15 T 14-10-2018 IPR038527 HupH, C-terminal domain superfamily C4901_12235 8af8c7072b915af10b08bff376e626ac 269 Gene3D G3DSA:3.30.1370.140 150 247 1.7E-28 T 14-10-2018 IPR038527 HupH, C-terminal domain superfamily C4901_12235 8af8c7072b915af10b08bff376e626ac 269 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 66 129 3.0E-6 T 14-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal C4901_12235 8af8c7072b915af10b08bff376e626ac 269 ProDom PD005668 HYDROGENASE HUPH HYDROGENASE-1 EXPRESSION/FORMATION OPERON PROTEIN C-TERMINAL EXPRESSION HYAF HOXQ 151 261 4.0E-22 T 14-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal C4901_12235 8af8c7072b915af10b08bff376e626ac 269 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 67 130 1.5E-4 T 14-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal C4901_12235 8af8c7072b915af10b08bff376e626ac 269 Pfam PF04809 HupH hydrogenase expression protein, C-terminal conserved region 151 261 6.5E-38 T 14-10-2018 IPR006894 HupH hydrogenase expression protein, C-terminal C4901_05840 236d5b8a210c0041ab0230d248c15677 153 Gene3D G3DSA:3.30.420.10 1 145 4.9E-58 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_05840 236d5b8a210c0041ab0230d248c15677 153 SUPERFAMILY SSF53098 3 142 2.78E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_05840 236d5b8a210c0041ab0230d248c15677 153 Pfam PF00075 RNase H 3 140 2.7E-50 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 C4901_05840 236d5b8a210c0041ab0230d248c15677 153 Hamap MF_00042 Ribonuclease H [rnhA]. 1 149 35.702 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 C4901_15060 eb49a79f9e805224f26ea1ab65728199 325 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 161 240 1.4E-27 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 C4901_15060 eb49a79f9e805224f26ea1ab65728199 325 Pfam PF13247 4Fe-4S dicluster domain 24 73 2.7E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain C4901_15060 eb49a79f9e805224f26ea1ab65728199 325 Gene3D G3DSA:3.30.70.20 192 271 2.6E-11 T 14-10-2018 C4901_15060 eb49a79f9e805224f26ea1ab65728199 325 Gene3D G3DSA:3.30.70.20 40 173 4.8E-45 T 14-10-2018 C4901_15060 eb49a79f9e805224f26ea1ab65728199 325 SUPERFAMILY SSF54862 36 287 2.51E-63 T 14-10-2018 C4901_03775 7862df917558bb0ff7e3e627f71d2178 340 SUPERFAMILY SSF55681 21 235 1.16E-37 T 14-10-2018 C4901_03775 7862df917558bb0ff7e3e627f71d2178 340 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 158 1.5E-4 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 C4901_03775 7862df917558bb0ff7e3e627f71d2178 340 Gene3D G3DSA:3.30.930.10 2 239 1.5E-31 T 14-10-2018 C4901_16015 5e4b762717715720873e280bf9c2d070 329 Gene3D G3DSA:1.20.1420.30 33 291 4.8E-33 T 14-10-2018 C4901_16015 5e4b762717715720873e280bf9c2d070 329 Pfam PF01699 Sodium/calcium exchanger protein 3 151 1.7E-13 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 C4901_16015 5e4b762717715720873e280bf9c2d070 329 Pfam PF01699 Sodium/calcium exchanger protein 190 325 6.7E-8 T 14-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 C4901_16015 5e4b762717715720873e280bf9c2d070 329 Gene3D G3DSA:1.20.58.1130 7 219 4.8E-33 T 14-10-2018 C4901_14885 1fd47ec5122a726e457a7bdf3ade6ebb 270 Gene3D G3DSA:3.40.430.10 13 269 3.3E-33 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C4901_14885 1fd47ec5122a726e457a7bdf3ade6ebb 270 SUPERFAMILY SSF53597 29 230 2.86E-23 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 C4901_14885 1fd47ec5122a726e457a7bdf3ade6ebb 270 Pfam PF01872 RibD C-terminal domain 31 234 2.9E-16 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 C4901_01615 8991e6e9a4d75f6b146ab9f1fad2b019 200 Gene3D G3DSA:3.40.50.10610 37 196 7.3E-13 T 14-10-2018 C4901_01615 8991e6e9a4d75f6b146ab9f1fad2b019 200 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 63 186 3.9E-6 T 14-10-2018 IPR005586 ABC-type transport auxiliary lipoprotein component C4901_01615 8991e6e9a4d75f6b146ab9f1fad2b019 200 SUPERFAMILY SSF159594 38 193 7.85E-21 T 14-10-2018 C4901_14720 b20703393de067a0f039d65814f86c13 137 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 11 103 1.1E-17 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis C4901_14720 b20703393de067a0f039d65814f86c13 137 SUPERFAMILY SSF53146 1 118 5.49E-34 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C4901_14720 b20703393de067a0f039d65814f86c13 137 Gene3D G3DSA:3.30.420.130 1 119 9.9E-33 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily C4901_14720 b20703393de067a0f039d65814f86c13 137 TIGRFAM TIGR02663 nifX: nitrogen fixation protein NifX 1 119 5.3E-51 T 14-10-2018 IPR013480 Nitrogen fixation protein NifX GO:0009399|GO:0051188|GO:0051540 C4901_06875 c1befcbf53a1adb11ee5d7d77f98b90e 114 PIRSF PIRSF039032 1 111 1.7E-34 T 14-10-2018 IPR009387 Toxin HigB-2 C4901_05115 73682e0151466fcb4cc963d2498b9d9a 332 SUPERFAMILY SSF48576 14 331 3.52E-93 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C4901_05115 73682e0151466fcb4cc963d2498b9d9a 332 Gene3D G3DSA:1.10.600.10 5 332 8.0E-107 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily C4901_05115 73682e0151466fcb4cc963d2498b9d9a 332 Pfam PF00348 Polyprenyl synthetase 43 272 1.8E-71 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 C4901_05115 73682e0151466fcb4cc963d2498b9d9a 332 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 92 106 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site C4901_09470 af5357f14cab10776d1b0bf01a90bc1d 142 Gene3D G3DSA:3.40.1230.10 16 139 1.1E-38 T 14-10-2018 IPR036748 MTH938-like superfamily C4901_09470 af5357f14cab10776d1b0bf01a90bc1d 142 SUPERFAMILY SSF64076 16 137 3.66E-38 T 14-10-2018 IPR036748 MTH938-like superfamily C4901_09470 af5357f14cab10776d1b0bf01a90bc1d 142 Pfam PF04430 Protein of unknown function (DUF498/DUF598) 29 136 2.5E-31 T 14-10-2018 IPR007523 NDUFAF3/Mth938 domain-containing protein C4901_01395 ca684603b31b1450e9df32d5a9940e77 55 Pfam PF12323 Helix-turn-helix domain 4 36 2.0E-9 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain C4901_01260 91b2fd1e4d70032f84ae21352011a9b5 461 Pfam PF05940 NnrS protein 63 456 1.6E-56 T 14-10-2018 IPR010266 NnrS C4901_11850 a17186c7cb1ed7e4803c4b7f1b274372 266 Gene3D G3DSA:3.40.50.300 25 261 9.4E-39 T 14-10-2018 C4901_11850 a17186c7cb1ed7e4803c4b7f1b274372 266 SUPERFAMILY SSF52540 85 256 3.25E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_14085 e47757156da8df1c4520ccd70b4cc072 63 Gene3D G3DSA:1.10.287.310 1 61 2.1E-21 T 14-10-2018 C4901_14085 e47757156da8df1c4520ccd70b4cc072 63 SUPERFAMILY SSF46561 1 59 1.96E-17 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14085 e47757156da8df1c4520ccd70b4cc072 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 15.138 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14085 e47757156da8df1c4520ccd70b4cc072 63 Pfam PF00831 Ribosomal L29 protein 4 59 1.0E-19 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_14085 e47757156da8df1c4520ccd70b4cc072 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 59 7.0E-19 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 C4901_13865 690ee5facfe53b5be85090aeb53fcf15 294 Gene3D G3DSA:3.30.200.20 2 95 1.2E-13 T 14-10-2018 C4901_13865 690ee5facfe53b5be85090aeb53fcf15 294 Pfam PF03881 Fructosamine kinase 4 290 6.1E-101 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 C4901_13865 690ee5facfe53b5be85090aeb53fcf15 294 SUPERFAMILY SSF56112 35 285 2.77E-36 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily C4901_13865 690ee5facfe53b5be85090aeb53fcf15 294 Gene3D G3DSA:3.90.1200.10 96 294 1.5E-67 T 14-10-2018 C4901_13865 690ee5facfe53b5be85090aeb53fcf15 294 PIRSF PIRSF006221 3 293 7.4E-92 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 C4901_11055 cee5d6ca081cffaa03be8190ca715508 99 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 6 98 9.2E-32 T 14-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 C4901_11055 cee5d6ca081cffaa03be8190ca715508 99 Gene3D G3DSA:3.30.2310.40 1 99 5.6E-38 T 14-10-2018 IPR038493 Toxin MqsR superfamily C4901_17070 e627005a011836cc1d9a16b0ef5d4ee4 235 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_17070 e627005a011836cc1d9a16b0ef5d4ee4 235 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 7 29 1.4E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_17070 e627005a011836cc1d9a16b0ef5d4ee4 235 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 29 2.6E-7 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site C4901_17070 e627005a011836cc1d9a16b0ef5d4ee4 235 SUPERFAMILY SSF54523 10 116 4.63E-6 T 14-10-2018 C4901_15550 b635aa7b2149e38ba00901b90810b257 188 SUPERFAMILY SSF47413 54 102 2.41E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_08785 aa346502925583d3b75cd2ec0608b7b5 447 Pfam PF00155 Aminotransferase class I and II 93 435 1.5E-31 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 C4901_08785 aa346502925583d3b75cd2ec0608b7b5 447 Gene3D G3DSA:3.90.1150.10 76 436 1.9E-125 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_08785 aa346502925583d3b75cd2ec0608b7b5 447 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 68 440 1.9E-137 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 C4901_08785 aa346502925583d3b75cd2ec0608b7b5 447 SUPERFAMILY SSF53383 68 440 2.29E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_08785 aa346502925583d3b75cd2ec0608b7b5 447 Gene3D G3DSA:3.40.640.10 127 350 1.9E-125 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_07360 7fec3e855d2cb4f860209d256342a71b 98 Gene3D G3DSA:3.30.2310.40 1 98 5.1E-39 T 14-10-2018 IPR038493 Toxin MqsR superfamily C4901_07360 7fec3e855d2cb4f860209d256342a71b 98 Pfam PF15723 Motility quorum-sensing regulator, toxin of MqsA 5 97 2.9E-30 T 14-10-2018 IPR031451 mRNA interferase toxin MqsR GO:0009372|GO:0017148|GO:0044010 C4901_02160 a246cda4ea7bed80be6b7d7929ecb6b1 334 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 61 330 7.7E-43 T 14-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX C4901_15835 a5a0617e505906c40eae5363390655c1 832 SUPERFAMILY SSF53300 640 825 5.68E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_15835 a5a0617e505906c40eae5363390655c1 832 SMART SM00327 637 829 3.4E-11 T 14-10-2018 IPR002035 von Willebrand factor, type A C4901_15835 a5a0617e505906c40eae5363390655c1 832 Gene3D G3DSA:3.40.50.410 636 821 2.2E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_07665 ba191e55f1ea4d8d08006fc48ed13709 400 SUPERFAMILY SSF51905 10 330 1.39E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_07665 ba191e55f1ea4d8d08006fc48ed13709 400 Gene3D G3DSA:3.50.50.100 9 399 3.9E-54 T 14-10-2018 C4901_12945 694ff4cae20c0477f6e4e61b0194906b 132 Pfam PF02635 DsrE/DsrF-like family 12 132 2.6E-20 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein C4901_12945 694ff4cae20c0477f6e4e61b0194906b 132 SUPERFAMILY SSF75169 12 132 1.38E-19 T 14-10-2018 IPR027396 DsrEFH-like C4901_12945 694ff4cae20c0477f6e4e61b0194906b 132 Gene3D G3DSA:3.40.1260.10 4 132 1.7E-31 T 14-10-2018 IPR027396 DsrEFH-like C4901_00700 70c5a4b1bc65091681ef9bacf0cb7708 294 Pfam PF00892 EamA-like transporter family 153 280 3.2E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_07880 c0006ee73194fe898bf55e34231564ee 157 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C4901_07880 c0006ee73194fe898bf55e34231564ee 157 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.6E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 C4901_07880 c0006ee73194fe898bf55e34231564ee 157 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 C4901_07880 c0006ee73194fe898bf55e34231564ee 157 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 36.336 T 14-10-2018 IPR022927 RNA pyrophosphohydrolase RppH C4901_07880 c0006ee73194fe898bf55e34231564ee 157 Gene3D G3DSA:3.90.79.10 1 157 1.9E-40 T 14-10-2018 C4901_07880 c0006ee73194fe898bf55e34231564ee 157 SUPERFAMILY SSF55811 6 154 8.26E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_07880 c0006ee73194fe898bf55e34231564ee 157 Pfam PF00293 NUDIX domain 7 145 3.5E-24 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_03790 0f3b1985b92c82f9632269848b37c7e8 175 Pfam PF01814 Hemerythrin HHE cation binding domain 18 148 2.6E-12 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C4901_03790 0f3b1985b92c82f9632269848b37c7e8 175 Gene3D G3DSA:1.20.120.520 5 169 8.9E-37 T 14-10-2018 C4901_08115 d26b0116b2071c48fc1e853eaf47f4a1 182 Pfam PF09335 SNARE associated Golgi protein 23 142 6.7E-17 T 14-10-2018 IPR032816 SNARE associated Golgi protein C4901_13010 302c3022663bc595f8750341e2a8eb50 476 SUPERFAMILY SSF48452 304 438 5.51E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_13010 302c3022663bc595f8750341e2a8eb50 476 Gene3D G3DSA:1.25.40.10 304 372 2.5E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_13010 302c3022663bc595f8750341e2a8eb50 476 Pfam PF01435 Peptidase family M48 78 252 4.2E-24 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 C4901_13010 302c3022663bc595f8750341e2a8eb50 476 Gene3D G3DSA:1.25.40.10 373 446 2.2E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 C4901_05895 0bbfed361eed8b43e3dcff64c1355253 168 SUPERFAMILY SSF46626 29 162 1.92E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_05895 0bbfed361eed8b43e3dcff64c1355253 168 Gene3D G3DSA:1.10.760.10 24 165 6.7E-22 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_01990 3c240ba600b1489b99f9d9af2742ae48 98 TIGRFAM TIGR02620 cas_VVA1548: putative CRISPR-associated protein, VVA1548 family 4 93 3.9E-34 T 14-10-2018 IPR013443 Putative CRISPR-associated protein, VVA1548 family C4901_01990 3c240ba600b1489b99f9d9af2742ae48 98 Pfam PF09652 Putative CRISPR-associated protein (Cas_VVA1548) 4 92 1.7E-36 T 14-10-2018 IPR013443 Putative CRISPR-associated protein, VVA1548 family C4901_01655 f4bc5d40f71f95c0e87adaf79f177c4a 259 SUPERFAMILY SSF102829 163 252 1.18E-19 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily C4901_01655 f4bc5d40f71f95c0e87adaf79f177c4a 259 Gene3D G3DSA:1.20.5.50 205 256 5.8E-7 T 14-10-2018 C4901_01655 f4bc5d40f71f95c0e87adaf79f177c4a 259 Gene3D G3DSA:1.10.20.30 158 204 7.2E-16 T 14-10-2018 C4901_01655 f4bc5d40f71f95c0e87adaf79f177c4a 259 Pfam PF05164 Cell division protein ZapA 163 244 7.3E-19 T 14-10-2018 IPR007838 Cell division protein ZapA-like C4901_13120 00fb4ad33a108538e3f4b46b2cc036c3 528 Pfam PF03958 Bacterial type II/III secretion system short domain 291 419 4.3E-8 T 14-10-2018 IPR005644 NolW-like C4901_13120 00fb4ad33a108538e3f4b46b2cc036c3 528 PRINTS PR00811 Bacterial general secretion pathway protein D signature 419 429 3.4E-5 T 14-10-2018 IPR001775 GspD/PilQ family C4901_13120 00fb4ad33a108538e3f4b46b2cc036c3 528 PRINTS PR00811 Bacterial general secretion pathway protein D signature 493 517 3.4E-5 T 14-10-2018 IPR001775 GspD/PilQ family C4901_13120 00fb4ad33a108538e3f4b46b2cc036c3 528 Gene3D G3DSA:3.30.1370.120 55 202 1.6E-14 T 14-10-2018 IPR038591 NolW-like superfamily C4901_13155 7b88bf3f826b8c68d18787ec76bba822 437 Pfam PF03050 Transposase IS66 family 83 376 2.0E-42 T 14-10-2018 IPR004291 Transposase, IS66 C4901_03880 d86a616c1d0c878f74e9fb6ea0be9612 147 Pfam PF08897 Domain of unknown function (DUF1841) 5 137 1.5E-40 T 14-10-2018 IPR014993 Protein of unknown function DUF1841 C4901_01330 90b408ce4d64ee96a217b3d20c88de94 487 SUPERFAMILY SSF50475 2 320 5.89E-105 T 14-10-2018 C4901_01330 90b408ce4d64ee96a217b3d20c88de94 487 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 9 431 3.3E-152 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 C4901_01330 90b408ce4d64ee96a217b3d20c88de94 487 SUPERFAMILY SSF143968 324 486 5.75E-57 T 14-10-2018 C4901_01330 90b408ce4d64ee96a217b3d20c88de94 487 Gene3D G3DSA:3.40.1670.10 337 453 1.9E-48 T 14-10-2018 C4901_01330 90b408ce4d64ee96a217b3d20c88de94 487 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 5 454 6.6E-144 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 C4901_08610 ccdf666e62a9775e01ee55a7353a5db7 477 Pfam PF00361 Proton-conducting membrane transporter 118 409 1.7E-52 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08610 ccdf666e62a9775e01ee55a7353a5db7 477 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 124 143 5.2E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08610 ccdf666e62a9775e01ee55a7353a5db7 477 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 5.2E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08610 ccdf666e62a9775e01ee55a7353a5db7 477 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 232 256 5.2E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_08610 ccdf666e62a9775e01ee55a7353a5db7 477 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 5.2E-11 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_09230 4a38cbe055276332e5f0c86dff56e585 130 SUPERFAMILY SSF53335 40 113 4.15E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_09230 4a38cbe055276332e5f0c86dff56e585 130 Pfam PF02384 N-6 DNA Methylase 42 107 3.8E-15 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 C4901_09230 4a38cbe055276332e5f0c86dff56e585 130 Gene3D G3DSA:3.40.50.150 32 124 9.3E-26 T 14-10-2018 C4901_04230 4566ffd423688fd2b539112b478bb209 151 Pfam PF05717 IS66 Orf2 like protein 9 77 9.4E-22 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_04065 9e943ed4ba3aa682a12cac34025c7445 376 SUPERFAMILY SSF50974 24 347 2.88E-38 T 14-10-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 C4901_04065 9e943ed4ba3aa682a12cac34025c7445 376 Pfam PF10282 Lactonase, 7-bladed beta-propeller 34 116 3.6E-6 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller C4901_04065 9e943ed4ba3aa682a12cac34025c7445 376 Pfam PF10282 Lactonase, 7-bladed beta-propeller 119 296 2.5E-21 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller C4901_04065 9e943ed4ba3aa682a12cac34025c7445 376 Gene3D G3DSA:2.130.10.10 33 363 2.0E-57 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 C4901_04090 fca363ea0ed18bb28b9e3db1e0bb4c66 179 PIRSF PIRSF000847 1 176 2.9E-39 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 C4901_04090 fca363ea0ed18bb28b9e3db1e0bb4c66 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 1 61 4.6E-13 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 C4901_04090 fca363ea0ed18bb28b9e3db1e0bb4c66 179 Gene3D G3DSA:1.20.120.1760 1 160 1.5E-9 T 14-10-2018 C4901_08150 cd676393ad47f41b7157af557feb4ab6 84 SUPERFAMILY SSF88723 3 82 2.11E-6 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_06740 d85f4d4715d2b3581cdb24854cdb8164 297 Pfam PF14236 Domain of unknown function (DUF4338) 65 294 3.2E-60 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_15280 666853368326284eb108e40b058b5739 226 Pfam PF11740 Plasmid replication region DNA-binding N-term 8 115 6.2E-20 T 14-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain C4901_06955 d8f51273f7bdbc84ee7ae3ca02d0bca7 484 Pfam PF11855 Protein of unknown function (DUF3375) 11 482 1.5E-155 T 14-10-2018 IPR021804 Protein of unknown function DUF3375 C4901_07610 db16ff304a1a1182daea32e8f4c04877 169 Gene3D G3DSA:2.40.10.330 73 123 8.0E-31 T 14-10-2018 C4901_07610 db16ff304a1a1182daea32e8f4c04877 169 Gene3D G3DSA:3.10.50.40 5 152 8.0E-31 T 14-10-2018 C4901_07610 db16ff304a1a1182daea32e8f4c04877 169 SUPERFAMILY SSF54534 5 142 7.16E-19 T 14-10-2018 C4901_02030 ebc46a9561169744b42e4d88364c0c4c 379 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 7 372 2.7E-62 T 14-10-2018 IPR019117 CRISPR-associated protein, Cmr3 C4901_02030 ebc46a9561169744b42e4d88364c0c4c 379 Gene3D G3DSA:3.30.70.2950 256 353 2.3E-8 T 14-10-2018 C4901_10970 37f63a285d34a22ab1f5f8afbbb44cea 704 SUPERFAMILY SSF52540 44 401 5.43E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_10970 37f63a285d34a22ab1f5f8afbbb44cea 704 Gene3D G3DSA:3.40.50.300 25 219 6.4E-8 T 14-10-2018 C4901_10970 37f63a285d34a22ab1f5f8afbbb44cea 704 Gene3D G3DSA:3.40.50.300 253 426 1.9E-8 T 14-10-2018 C4901_07725 a9c0d8ce01debdd932505d56f7a65d49 315 Gene3D G3DSA:3.30.1330.40 195 308 7.0E-14 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C4901_07725 a9c0d8ce01debdd932505d56f7a65d49 315 SUPERFAMILY SSF55298 201 307 1.41E-11 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 C4901_09555 b577d8e68fb5b2cbe4ec967ef1c3072d 370 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 58 149 2.1E-5 T 14-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 C4901_15560 3e0215117269cc5703f31eacc2410258 388 SUPERFAMILY SSF53167 98 313 2.14E-9 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 C4901_15560 3e0215117269cc5703f31eacc2410258 388 Gene3D G3DSA:3.40.50.1580 98 318 5.0E-26 T 14-10-2018 C4901_11075 4f40c6e507564810f898e593737701d5 779 Gene3D G3DSA:3.40.50.300 1 71 2.5E-7 T 14-10-2018 C4901_11075 4f40c6e507564810f898e593737701d5 779 Pfam PF13175 AAA ATPase domain 241 464 6.1E-23 T 14-10-2018 C4901_11075 4f40c6e507564810f898e593737701d5 779 Pfam PF13175 AAA ATPase domain 1 50 4.4E-13 T 14-10-2018 C4901_11075 4f40c6e507564810f898e593737701d5 779 SUPERFAMILY SSF52540 1 465 5.19E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_12045 bcf74efdff03d398c244c674299ee2fb 98 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 86 1.3E-13 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 C4901_06995 6bd9341eab86b204753c9472305c0ba6 139 Pfam PF01844 HNH endonuclease 49 96 1.5E-9 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 C4901_04395 8f20a54b7244605df98bbf484f67faec 327 SUPERFAMILY SSF51430 1 312 1.57E-97 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C4901_04395 8f20a54b7244605df98bbf484f67faec 327 Pfam PF00248 Aldo/keto reductase family 16 304 2.9E-68 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain C4901_04395 8f20a54b7244605df98bbf484f67faec 327 Gene3D G3DSA:3.20.20.100 1 326 5.5E-111 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily C4901_13895 2d9c30f256ea1a0fa6fe84483d568d44 75 Pfam PF11146 Protein of unknown function (DUF2905) 11 72 6.6E-12 T 14-10-2018 IPR021320 Protein of unknown function DUF2905 C4901_05225 e279a7677c7480059e47195899a21417 437 Pfam PF07592 Rhodopirellula transposase DDE domain 92 329 3.8E-108 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_05225 e279a7677c7480059e47195899a21417 437 Pfam PF07592 Rhodopirellula transposase DDE domain 330 432 9.0E-43 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_10410 c9386a48e0ad0392a8f33c261a1beda6 314 Pfam PF01148 Cytidylyltransferase family 49 310 6.2E-50 T 14-10-2018 C4901_03030 fbb675397b8114566860f678e074f5eb 269 Pfam PF01061 ABC-2 type transporter 33 224 5.0E-9 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 C4901_02525 45e3af7b10b33caa2725d4df83df91a2 466 Pfam PF01385 Probable transposase 208 327 2.7E-15 T 14-10-2018 IPR001959 Probable transposase, IS891/IS1136/IS1341 C4901_02525 45e3af7b10b33caa2725d4df83df91a2 466 Pfam PF12323 Helix-turn-helix domain 5 47 1.0E-7 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain C4901_11180 7182ff72ecb7108bfe0f739c5e22e842 126 SUPERFAMILY SSF50118 16 118 1.5E-8 T 14-10-2018 C4901_04375 e17567d1fe7cf281f84df48e598602b5 166 Pfam PF05119 Phage terminase, small subunit 59 154 4.3E-12 T 14-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family C4901_04735 e278381dec2f771a33060ffe023fead4 236 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 11 234 37.467 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 C4901_04735 e278381dec2f771a33060ffe023fead4 236 Gene3D G3DSA:3.40.50.150 11 234 2.6E-75 T 14-10-2018 C4901_04735 e278381dec2f771a33060ffe023fead4 236 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 11 228 5.5E-83 T 14-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 C4901_04735 e278381dec2f771a33060ffe023fead4 236 SUPERFAMILY SSF53335 13 233 1.32E-50 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_04735 e278381dec2f771a33060ffe023fead4 236 Pfam PF13489 Methyltransferase domain 48 201 1.8E-24 T 14-10-2018 C4901_06870 ad4c0110bab51ec99a8078e08c4944af 334 Pfam PF01610 Transposase 123 326 4.6E-54 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_16815 4a2ada1d6f37b186f625cbb7772b1907 425 Gene3D G3DSA:3.50.50.60 123 283 1.4E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_16815 4a2ada1d6f37b186f625cbb7772b1907 425 Gene3D G3DSA:3.50.50.60 8 337 1.4E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_16815 4a2ada1d6f37b186f625cbb7772b1907 425 SUPERFAMILY SSF51905 7 340 2.77E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_16815 4a2ada1d6f37b186f625cbb7772b1907 425 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 138 4.0E-10 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 C4901_01565 926eae8c3efa986093feff4c20610332 119 SMART SM00530 7 61 1.2E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_01565 926eae8c3efa986093feff4c20610332 119 Gene3D G3DSA:1.10.260.40 1 69 2.7E-23 T 14-10-2018 C4901_01565 926eae8c3efa986093feff4c20610332 119 SUPERFAMILY SSF47413 4 64 4.83E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 C4901_01565 926eae8c3efa986093feff4c20610332 119 Pfam PF01381 Helix-turn-helix 8 61 2.5E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 C4901_15705 93f3a831309b6c3ce02b1766a6dc670c 425 Pfam PF01610 Transposase 167 401 2.7E-62 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_15705 93f3a831309b6c3ce02b1766a6dc670c 425 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 102 151 8.8E-10 T 14-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain C4901_00825 2a3ff2c020c1aac20f3fd9c7cca4e914 160 Pfam PF04361 Protein of unknown function (DUF494) 5 158 4.6E-58 T 14-10-2018 IPR007456 Smg C4901_00825 2a3ff2c020c1aac20f3fd9c7cca4e914 160 Hamap MF_00598 Protein Smg [smg]. 5 160 29.391 T 14-10-2018 IPR007456 Smg C4901_05675 4e1062c931ec815e8a5530b94082f053 180 Gene3D G3DSA:3.30.420.10 50 130 2.8E-9 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 C4901_05675 4e1062c931ec815e8a5530b94082f053 180 Pfam PF00665 Integrase core domain 51 129 2.0E-13 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 C4901_05675 4e1062c931ec815e8a5530b94082f053 180 SUPERFAMILY SSF53098 51 141 3.95E-21 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_03130 2ecb235b1aa9bd808e520a4cceca49b8 431 Gene3D G3DSA:3.65.10.10 6 414 2.1E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C4901_03130 2ecb235b1aa9bd808e520a4cceca49b8 431 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 3.1E-109 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 C4901_03130 2ecb235b1aa9bd808e520a4cceca49b8 431 Gene3D G3DSA:3.65.10.10 21 229 2.1E-170 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 C4901_03130 2ecb235b1aa9bd808e520a4cceca49b8 431 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 3.5E-179 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_03130 2ecb235b1aa9bd808e520a4cceca49b8 431 SUPERFAMILY SSF55205 2 418 1.39E-140 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 C4901_03130 2ecb235b1aa9bd808e520a4cceca49b8 431 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.357 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 C4901_08810 4dcf177fdd765bb773691e0bee996efb 169 Pfam PF02620 Uncharacterized ACR, COG1399 61 142 4.6E-15 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD C4901_00460 a4aad2bd888e094d2b12edae44c2b848 209 SUPERFAMILY SSF81301 109 208 4.09E-13 T 14-10-2018 C4901_00460 a4aad2bd888e094d2b12edae44c2b848 209 Gene3D G3DSA:3.30.460.10 96 206 8.3E-11 T 14-10-2018 C4901_00460 a4aad2bd888e094d2b12edae44c2b848 209 Pfam PF01909 Nucleotidyltransferase domain 118 147 1.3E-6 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 C4901_03100 bca9e0f8853ad1d77ab2097a1eb0e52a 208 Pfam PF05494 MlaC protein 40 201 2.9E-51 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC C4901_03100 bca9e0f8853ad1d77ab2097a1eb0e52a 208 Gene3D G3DSA:3.10.450.710 29 205 8.3E-55 T 14-10-2018 C4901_03100 bca9e0f8853ad1d77ab2097a1eb0e52a 208 PIRSF PIRSF004649 3 207 3.3E-51 T 14-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC C4901_02595 6a98779cc54cb5594f96690644af40bc 226 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 17 184 2.0E-9 T 14-10-2018 C4901_03345 f22941b5fd9507b2657352c433af51a6 377 PIRSF PIRSF036915 3 377 3.0E-123 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 C4901_03345 f22941b5fd9507b2657352c433af51a6 377 ProSitePatterns PS01054 Transaldolase signature 1. 44 52 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C4901_03345 f22941b5fd9507b2657352c433af51a6 377 Gene3D G3DSA:3.20.20.70 7 369 5.5E-135 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 C4901_03345 f22941b5fd9507b2657352c433af51a6 377 TIGRFAM TIGR00876 tal_mycobact: transaldolase 18 364 1.0E-90 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 C4901_03345 f22941b5fd9507b2657352c433af51a6 377 Hamap MF_00493 Transaldolase [tal]. 1 377 112.39 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 C4901_03345 f22941b5fd9507b2657352c433af51a6 377 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 19 367 2.2E-78 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 C4901_03345 f22941b5fd9507b2657352c433af51a6 377 SUPERFAMILY SSF51569 14 370 1.09E-68 T 14-10-2018 C4901_16315 7fe5c4dff76b3438261a3137a2bbcf9e 394 Gene3D G3DSA:2.60.40.3470 277 393 2.5E-24 T 14-10-2018 C4901_16315 7fe5c4dff76b3438261a3137a2bbcf9e 394 Gene3D G3DSA:2.60.40.3500 154 259 6.5E-8 T 14-10-2018 C4901_16315 7fe5c4dff76b3438261a3137a2bbcf9e 394 Pfam PF11741 AMIN domain 175 248 1.1E-8 T 14-10-2018 IPR021731 AMIN domain C4901_07870 bd6cf941c01c3c78b173c59ea2939771 308 Pfam PF03186 CobD/Cbib protein 9 252 4.8E-48 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 C4901_07870 bd6cf941c01c3c78b173c59ea2939771 308 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 306 59.597 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 C4901_03495 d9f3a790bd26935222863a76558de965 476 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 120 351 6.5E-43 T 14-10-2018 IPR000477 Reverse transcriptase domain C4901_03495 d9f3a790bd26935222863a76558de965 476 SUPERFAMILY SSF56672 61 428 1.5E-57 T 14-10-2018 C4901_03495 d9f3a790bd26935222863a76558de965 476 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 71 437 4.2E-100 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase C4901_11085 d9f3a790bd26935222863a76558de965 476 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 120 351 6.5E-43 T 14-10-2018 IPR000477 Reverse transcriptase domain C4901_11085 d9f3a790bd26935222863a76558de965 476 SUPERFAMILY SSF56672 61 428 1.5E-57 T 14-10-2018 C4901_11085 d9f3a790bd26935222863a76558de965 476 TIGRFAM TIGR04416 group_II_RT_mat: group II intron reverse transcriptase/maturase 71 437 4.2E-100 T 14-10-2018 IPR030931 Group II intron reverse transcriptase/maturase C4901_08295 5ea8f44425f7acb84f8eae5ca478665d 105 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 10 100 28.641 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS C4901_08295 5ea8f44425f7acb84f8eae5ca478665d 105 SUPERFAMILY SSF54736 20 104 1.83E-31 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C4901_08295 5ea8f44425f7acb84f8eae5ca478665d 105 Gene3D G3DSA:3.30.1390.10 4 105 1.5E-41 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like C4901_08295 5ea8f44425f7acb84f8eae5ca478665d 105 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 24 101 5.2E-34 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 C4901_06090 643dd2f43ad24f684314e0c348d81641 222 Gene3D G3DSA:3.40.640.10 1 89 7.6E-31 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 C4901_06090 643dd2f43ad24f684314e0c348d81641 222 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 32 46 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C4901_06090 643dd2f43ad24f684314e0c348d81641 222 SUPERFAMILY SSF53383 2 221 1.73E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase C4901_06090 643dd2f43ad24f684314e0c348d81641 222 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 2 221 8.7E-79 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 C4901_06090 643dd2f43ad24f684314e0c348d81641 222 Gene3D G3DSA:3.90.1150.10 90 222 1.3E-51 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 C4901_16215 83dc504938e77cf12e9d7212cf32c3ca 306 Pfam PF01774 UreD urease accessory protein 81 280 3.4E-44 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 C4901_16215 83dc504938e77cf12e9d7212cf32c3ca 306 Hamap MF_01384 Urease accessory protein UreD [ureD]. 39 290 26.986 T 14-10-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 C4901_06170 cf9e2be2d73379d36122482f4fb02642 633 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 31.704 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup C4901_06170 cf9e2be2d73379d36122482f4fb02642 633 Pfam PF02705 K+ potassium transporter 14 545 1.6E-199 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 C4901_09850 6526d28e575758077e935f2835382a4a 65 Pfam PF10049 Protein of unknown function (DUF2283) 2 50 1.4E-16 T 14-10-2018 IPR019270 Protein of unknown function DUF2283 C4901_08330 2fc1cf5ab18616ce7a17100852cd9985 469 SUPERFAMILY SSF56954 1 432 6.41E-72 T 14-10-2018 C4901_08330 2fc1cf5ab18616ce7a17100852cd9985 469 Pfam PF02321 Outer membrane efflux protein 250 431 9.6E-26 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_08330 2fc1cf5ab18616ce7a17100852cd9985 469 Pfam PF02321 Outer membrane efflux protein 33 223 4.7E-18 T 14-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 C4901_08330 2fc1cf5ab18616ce7a17100852cd9985 469 Gene3D G3DSA:1.20.1600.10 25 454 6.4E-85 T 14-10-2018 C4901_06540 f7b9fddad8e04aad6f71157cea6cdf5c 143 Gene3D G3DSA:3.30.2310.20 67 128 2.1E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_06540 f7b9fddad8e04aad6f71157cea6cdf5c 143 Gene3D G3DSA:3.30.2310.20 1 66 2.8E-13 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_06540 f7b9fddad8e04aad6f71157cea6cdf5c 143 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 61 2.7E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C4901_11770 c1a6ebdad8c4c8e323831e227ca11811 122 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 31 2.4E-7 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat C4901_11770 c1a6ebdad8c4c8e323831e227ca11811 122 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 40 55 3.6E-6 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat C4901_10295 c9b1fc381472ef29d48e972cc50fcd8a 134 Pfam PF07681 DoxX 12 90 1.3E-16 T 14-10-2018 IPR032808 DoxX family C4901_11870 52fc4aad0fd858ec3e5437648892c25e 346 SUPERFAMILY SSF103481 196 283 4.32E-9 T 14-10-2018 C4901_11870 52fc4aad0fd858ec3e5437648892c25e 346 Pfam PF00892 EamA-like transporter family 3 139 2.2E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_11870 52fc4aad0fd858ec3e5437648892c25e 346 Pfam PF00892 EamA-like transporter family 151 280 1.9E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 C4901_11870 52fc4aad0fd858ec3e5437648892c25e 346 SUPERFAMILY SSF103481 42 141 3.14E-14 T 14-10-2018 C4901_08185 f533227ae72a5ffc67a2eb89bde04b1b 71 Pfam PF02599 Global regulator protein family 1 62 9.4E-6 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 C4901_08185 f533227ae72a5ffc67a2eb89bde04b1b 71 Gene3D G3DSA:3.30.70.1680 1 67 1.6E-9 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 C4901_15055 a63329e6f931cfd66a8f8876881593a0 450 Pfam PF07282 Putative transposase DNA-binding domain 327 395 4.3E-16 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_03685 03ced28b30cfc652d7035be04186cbc6 139 SUPERFAMILY SSF88723 1 116 1.7E-10 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_03685 03ced28b30cfc652d7035be04186cbc6 139 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 3 111 4.5E-9 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component C4901_03685 03ced28b30cfc652d7035be04186cbc6 139 Pfam PF13470 PIN domain 3 113 4.6E-20 T 14-10-2018 IPR002716 PIN domain C4901_05290 c8ab5aede32b808bc8710ec5bffce98c 219 Pfam PF01957 NfeD-like C-terminal, partner-binding 4 140 4.0E-7 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain C4901_05245 68298f17d9e73dc3c68506a31474c83f 117 Pfam PF13280 WYL domain 14 110 3.4E-10 T 14-10-2018 IPR026881 WYL domain C4901_14355 8c0570fd7c6b9671b1b4658b0557cece 112 SUPERFAMILY SSF52833 11 109 8.95E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily C4901_14355 8c0570fd7c6b9671b1b4658b0557cece 112 Gene3D G3DSA:3.40.30.10 11 112 1.7E-32 T 14-10-2018 C4901_08990 ab87e03d9b0e16936243837d08777f93 359 SUPERFAMILY SSF53756 40 334 2.72E-58 T 14-10-2018 C4901_08990 ab87e03d9b0e16936243837d08777f93 359 Gene3D G3DSA:3.40.50.2000 38 185 1.0E-11 T 14-10-2018 C4901_08990 ab87e03d9b0e16936243837d08777f93 359 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 164 330 5.4E-21 T 14-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 C4901_08990 ab87e03d9b0e16936243837d08777f93 359 Gene3D G3DSA:3.40.50.2000 209 353 4.2E-33 T 14-10-2018 C4901_03445 f5cb44940b938493ec576930a17547d7 304 Gene3D G3DSA:2.70.70.10 142 301 3.0E-46 T 14-10-2018 IPR011055 Duplicated hybrid motif C4901_03445 f5cb44940b938493ec576930a17547d7 304 SUPERFAMILY SSF51261 164 298 6.8E-52 T 14-10-2018 IPR011055 Duplicated hybrid motif C4901_03445 f5cb44940b938493ec576930a17547d7 304 Pfam PF01551 Peptidase family M23 200 294 9.1E-30 T 14-10-2018 IPR016047 Peptidase M23 C4901_03005 2f340a75bcd1e2441cf5dd0bd49b47a4 144 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 14 143 3.5E-14 T 14-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related C4901_03005 2f340a75bcd1e2441cf5dd0bd49b47a4 144 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 8 143 1.9E-19 T 14-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 C4901_06735 59cde3d31cd9f4c2d1d6ac508bbfe0ae 152 Pfam PF05717 IS66 Orf2 like protein 17 114 9.6E-27 T 14-10-2018 IPR008878 Transposase IS66, Orf2 C4901_03825 7c7721eef74f005bf5fb1aa141ba8862 251 SUPERFAMILY SSF53474 25 231 6.32E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_03825 7c7721eef74f005bf5fb1aa141ba8862 251 Gene3D G3DSA:3.40.50.1820 18 232 1.0E-13 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold C4901_02890 20bd9f98fe2cbdebbeac53a6cd1b4faa 449 Gene3D G3DSA:3.30.2290.10 2 235 3.6E-87 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal C4901_02890 20bd9f98fe2cbdebbeac53a6cd1b4faa 449 SUPERFAMILY SSF111283 14 448 2.75E-120 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 C4901_02890 20bd9f98fe2cbdebbeac53a6cd1b4faa 449 Pfam PF01523 Putative modulator of DNA gyrase 34 326 7.4E-56 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 C4901_16470 25f0c44b6151216f360e19ee12b3c05d 75 SUPERFAMILY SSF64307 3 74 2.09E-20 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_16470 25f0c44b6151216f360e19ee12b3c05d 75 Gene3D G3DSA:3.30.110.40 1 75 2.2E-22 T 14-10-2018 IPR036868 TusA-like domain superfamily C4901_16470 25f0c44b6151216f360e19ee12b3c05d 75 Pfam PF01206 Sulfurtransferase TusA 6 74 1.6E-19 T 14-10-2018 IPR001455 TusA-like domain C4901_15290 30756795f307bac49e28dc2a7ded0b90 288 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 130 246 1.2E-17 T 14-10-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 C4901_15290 30756795f307bac49e28dc2a7ded0b90 288 Gene3D G3DSA:1.10.260.40 68 119 8.7E-6 T 14-10-2018 C4901_06745 bdbf31d6333a426bf4158555cb52b3d2 475 Pfam PF03050 Transposase IS66 family 211 472 1.0E-31 T 14-10-2018 IPR004291 Transposase, IS66 C4901_09565 a6f9a344cc7eb21cd5c85a2e546cb8b2 136 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 131 9.0E-24 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C4901_02495 45219440e25c0b41dd91b445de159fbd 364 Pfam PF14236 Domain of unknown function (DUF4338) 73 216 7.5E-40 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_02495 45219440e25c0b41dd91b445de159fbd 364 Pfam PF13808 DDE_Tnp_1-associated 280 329 1.6E-11 T 14-10-2018 IPR032806 H repeat-associated protein, N-terminal C4901_06625 8b83710d022700bd3f943c0edd4e9eed 104 Pfam PF01610 Transposase 19 102 1.4E-23 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_01945 39fa9ce85db458c340ace6a5ff6b9189 251 Pfam PF12679 ABC-2 family transporter protein 71 244 6.3E-12 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 C4901_02590 e5cefaf9fb1e256695c86a45ce0f5f25 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 375 401 3.7E-8 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02590 e5cefaf9fb1e256695c86a45ce0f5f25 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 323 342 3.7E-8 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02590 e5cefaf9fb1e256695c86a45ce0f5f25 484 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 3.7E-8 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_02590 e5cefaf9fb1e256695c86a45ce0f5f25 484 Pfam PF00361 Proton-conducting membrane transporter 127 412 2.8E-52 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_11935 39e1ead2dfc7cb8e9513d8557ae475a3 190 Pfam PF10972 Peptidoglycan-binding protein, CsiV 117 182 1.9E-6 T 14-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV C4901_11945 35cff3f452c145b0e439196b74d72694 186 SUPERFAMILY SSF53271 29 185 8.0E-37 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C4901_11945 35cff3f452c145b0e439196b74d72694 186 Pfam PF00156 Phosphoribosyl transferase domain 22 171 1.9E-14 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C4901_11945 35cff3f452c145b0e439196b74d72694 186 Gene3D G3DSA:3.40.50.2020 5 186 4.4E-45 T 14-10-2018 C4901_06450 6fac8edd0d67fd007466144a3ac2d914 86 Pfam PF04267 Sarcosine oxidase, delta subunit family 4 80 3.3E-23 T 14-10-2018 IPR006279 Sarcosine oxidase, delta subunit, heterotetrameric GO:0008115|GO:0046653 KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 C4901_06450 6fac8edd0d67fd007466144a3ac2d914 86 Gene3D G3DSA:3.30.2270.10 1 86 2.6E-23 T 14-10-2018 IPR038561 Sarcosine oxidase subunit delta superfamily KEGG: 00260+1.5.3.1|MetaCyc: PWY-3661|MetaCyc: PWY-4722 C4901_03805 59139af9365c8fee4c2dc8cd48cd172d 124 Pfam PF04343 Protein of unknown function, DUF488 11 118 4.8E-26 T 14-10-2018 IPR007438 Protein of unknown function DUF488 C4901_05695 6a121815d156668b84ab4e6167eee0fe 460 Pfam PF16933 Putative exopolysaccharide Exporter (EPS-E) 1 453 8.2E-152 T 14-10-2018 IPR031617 Putative exopolysaccharide exporter C4901_15840 5c7f57eb529695446e2f5e50a44cafbe 282 SUPERFAMILY SSF52540 15 216 2.58E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15840 5c7f57eb529695446e2f5e50a44cafbe 282 Pfam PF07728 AAA domain (dynein-related subfamily) 46 180 5.3E-31 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 C4901_15840 5c7f57eb529695446e2f5e50a44cafbe 282 Gene3D G3DSA:3.40.50.300 30 198 7.9E-30 T 14-10-2018 C4901_15840 5c7f57eb529695446e2f5e50a44cafbe 282 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 193 277 3.3E-27 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal C4901_10335 699917ff1689c8b04525e344f449e04e 114 Pfam PF04977 Septum formation initiator 15 92 2.1E-21 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC C4901_10335 699917ff1689c8b04525e344f449e04e 114 Hamap MF_00599 Cell division protein FtsB [ftsB]. 4 94 24.209 T 14-10-2018 IPR023081 Cell division protein FtsB C4901_02065 296e2470ee15dd3199758efc55bea7e5 412 Pfam PF09455 CRISPR-associated (Cas) DxTHG family 8 371 1.3E-24 T 14-10-2018 IPR019016 CRISPR-associated DxTHG protein C4901_02065 296e2470ee15dd3199758efc55bea7e5 412 SUPERFAMILY SSF160980 20 166 2.22E-6 T 14-10-2018 C4901_02065 296e2470ee15dd3199758efc55bea7e5 412 TIGRFAM TIGR02549 CRISPR_DxTHG: CRISPR-associated DxTHG motif protein 144 160 7.5E-7 T 14-10-2018 IPR013383 CRISPR-associated protein DxTHG, conserved site C4901_02065 296e2470ee15dd3199758efc55bea7e5 412 TIGRFAM TIGR02221 cas_TM1812: CRISPR-associated protein, TM1812 family 7 224 6.2E-39 T 14-10-2018 IPR011742 CRISPR-associated protein, TM1812 C4901_08475 6fd13e9898a5f780091ad28581ec4212 149 SMART SM00317 1 103 2.0E-6 T 14-10-2018 IPR001214 SET domain GO:0005515 C4901_08475 6fd13e9898a5f780091ad28581ec4212 149 Pfam PF00856 SET domain 57 96 1.3E-9 T 14-10-2018 IPR001214 SET domain GO:0005515 C4901_08475 6fd13e9898a5f780091ad28581ec4212 149 Gene3D G3DSA:2.170.270.10 1 126 3.8E-22 T 14-10-2018 C4901_08475 6fd13e9898a5f780091ad28581ec4212 149 SUPERFAMILY SSF82199 2 119 2.35E-25 T 14-10-2018 C4901_01500 2d5dc51454f344be5094f481e94c0217 368 Pfam PF01609 Transposase DDE domain 11 120 2.3E-6 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_08760 63bff857775c4786dc07cd58cdef5e6e 437 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 290 401 4.0E-6 T 14-10-2018 C4901_08760 63bff857775c4786dc07cd58cdef5e6e 437 Pfam PF03601 Conserved hypothetical protein 698 88 408 2.8E-40 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 C4901_11650 24bce1a39b42db75d2db7d3c90369058 455 Pfam PF01610 Transposase 167 396 1.5E-53 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_11650 24bce1a39b42db75d2db7d3c90369058 455 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 102 151 9.7E-10 T 14-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain C4901_06575 ab60e8dde8dc6821303b59d2a44ae09c 219 Pfam PF07804 HipA-like C-terminal domain 1 183 5.5E-40 T 14-10-2018 IPR012893 HipA-like, C-terminal C4901_14835 fd422c0862981a93b266a0e9bf42db95 147 Pfam PF01012 Electron transfer flavoprotein domain 6 73 1.3E-5 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 C4901_14835 fd422c0862981a93b266a0e9bf42db95 147 SUPERFAMILY SSF52402 3 124 3.49E-18 T 14-10-2018 C4901_14835 fd422c0862981a93b266a0e9bf42db95 147 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 22 42 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 C4901_14835 fd422c0862981a93b266a0e9bf42db95 147 Gene3D G3DSA:3.40.50.620 1 129 3.5E-24 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold C4901_13535 e36824609eb90005d3d90ae82fc32054 95 ProDom PD394905 PM1122 UNCHARACTERIZED 10 49 8.0E-4 T 14-10-2018 C4901_04400 099f734c1bcada7b8465da3fb6bbda3d 214 Pfam PF13460 NAD(P)H-binding 8 180 1.1E-39 T 14-10-2018 IPR016040 NAD(P)-binding domain C4901_04400 099f734c1bcada7b8465da3fb6bbda3d 214 Gene3D G3DSA:3.40.50.720 1 200 6.8E-48 T 14-10-2018 C4901_04400 099f734c1bcada7b8465da3fb6bbda3d 214 SUPERFAMILY SSF51735 1 182 2.1E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily C4901_06000 d0452cd47c3d0b708871622fd1fb981d 259 Pfam PF01757 Acyltransferase family 63 235 1.9E-11 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 C4901_01355 0f6026f0a0a905c7fa4fcc7ea96ad10e 211 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 5 203 9.4E-63 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 C4901_01355 0f6026f0a0a905c7fa4fcc7ea96ad10e 211 Pfam PF03006 Haemolysin-III related 4 196 5.5E-40 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 C4901_16740 56487fea25c636fa9bd5af5a36fc7575 401 Gene3D G3DSA:3.40.190.10 220 294 5.2E-8 T 14-10-2018 C4901_16740 56487fea25c636fa9bd5af5a36fc7575 401 Pfam PF13531 Bacterial extracellular solute-binding protein 189 399 3.1E-10 T 14-10-2018 C4901_08140 8bc4e4a79e0fccb31667002bd658e54c 226 Pfam PF14236 Domain of unknown function (DUF4338) 2 225 9.9E-67 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_01300 cc6db5a4223ef87ea9d046f5d4be973a 294 Pfam PF01136 Peptidase family U32 93 262 2.0E-15 T 14-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 C4901_03670 33411d5021e9ed7fbcf43ee475f78806 210 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 102 151 2.9E-10 T 14-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain C4901_08550 eab67f9196c355cdc8a1796ba3583e9d 135 SUPERFAMILY SSF52540 12 59 8.15E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08550 eab67f9196c355cdc8a1796ba3583e9d 135 Pfam PF01695 IstB-like ATP binding protein 12 76 5.8E-10 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 C4901_08550 eab67f9196c355cdc8a1796ba3583e9d 135 Gene3D G3DSA:3.40.50.300 9 84 5.0E-6 T 14-10-2018 C4901_02510 c413419fafe53279bbb8bf95d263023e 115 Pfam PF13310 Virulence protein RhuM family 3 89 2.9E-12 T 14-10-2018 IPR011204 Virulence protein RhuM-like C4901_17095 382c29246ef72ad8126c09934afcd8d9 303 Pfam PF01882 Protein of unknown function DUF58 197 255 2.6E-12 T 14-10-2018 IPR002881 Domain of unknown function DUF58 C4901_10750 4e7f8884c619c6569f08c8e8928ff6ac 212 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 23 128 1.1E-17 T 14-10-2018 IPR015032 MTH538 TIR-like domain C4901_08220 ff2c84cc13d1ed197fb83108cd43c408 321 Gene3D G3DSA:3.60.10.10 92 321 6.4E-45 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C4901_08220 ff2c84cc13d1ed197fb83108cd43c408 321 SUPERFAMILY SSF56219 91 320 7.07E-40 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily C4901_08220 ff2c84cc13d1ed197fb83108cd43c408 321 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 96 311 1.9E-18 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase C4901_14415 01fefa8bdaef3934751bffc652282d34 235 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 8 222 4.2E-46 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 C4901_14415 01fefa8bdaef3934751bffc652282d34 235 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 8 210 6.5E-51 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 C4901_14415 01fefa8bdaef3934751bffc652282d34 235 Gene3D G3DSA:3.40.50.1360 3 231 9.7E-56 T 14-10-2018 C4901_14415 01fefa8bdaef3934751bffc652282d34 235 SUPERFAMILY SSF100950 3 229 2.19E-49 T 14-10-2018 IPR037171 NagB/RpiA transferase-like C4901_06940 78df23bc5d1ee37a567cae05b0771e1f 400 Pfam PF09983 Uncharacterized protein conserved in bacteria C-term(DUF2220) 209 385 2.2E-59 T 14-10-2018 IPR024534 Domain of unknown function DUF2220 C4901_06940 78df23bc5d1ee37a567cae05b0771e1f 400 PIRSF PIRSF028408 1 392 6.0E-86 T 14-10-2018 IPR014544 Uncharacterised conserved protein UCP028408 C4901_06940 78df23bc5d1ee37a567cae05b0771e1f 400 Pfam PF11795 Uncharacterized protein conserved in bacteria N-term (DUF3322) 6 186 1.9E-56 T 14-10-2018 IPR024537 Domain of unknown function DUF3322 C4901_08875 761f12ef5a88412e4e20ba5618a26314 126 Pfam PF07238 PilZ domain 22 113 7.4E-11 T 14-10-2018 IPR009875 PilZ domain GO:0035438 C4901_08875 761f12ef5a88412e4e20ba5618a26314 126 Gene3D G3DSA:2.40.10.220 13 126 2.3E-44 T 14-10-2018 C4901_04590 31aa76bb6aeb777201e8fc551d81e3f0 349 Pfam PF00146 NADH dehydrogenase 25 334 7.5E-127 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04590 31aa76bb6aeb777201e8fc551d81e3f0 349 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 222 235 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_04590 31aa76bb6aeb777201e8fc551d81e3f0 349 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 18 341 25.883 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_05085 2d2ea31f8f49f50c2d652687368959dc 825 SUPERFAMILY SSF53300 369 538 1.63E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_05085 2d2ea31f8f49f50c2d652687368959dc 825 Gene3D G3DSA:3.40.50.410 352 546 1.3E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily C4901_15965 2e70cb4babcaf362793c8af8ae1f829d 310 TIGRFAM TIGR04390 OMP_YaiO_dom: outer membrane protein, YaiO family 81 310 8.0E-38 T 14-10-2018 IPR030887 YaiO family, OMP domain C4901_09615 f3f21e1269776b3959307ca7bb8e09c8 197 Gene3D G3DSA:2.60.200.20 2 103 1.6E-22 T 14-10-2018 C4901_09615 f3f21e1269776b3959307ca7bb8e09c8 197 Pfam PF00498 FHA domain 27 89 7.7E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C4901_09615 f3f21e1269776b3959307ca7bb8e09c8 197 SMART SM00240 25 75 9.7E-9 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 C4901_09615 f3f21e1269776b3959307ca7bb8e09c8 197 SUPERFAMILY SSF49879 2 106 5.74E-23 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 C4901_14910 858b47850488cbbfa77b16dcfc35a394 129 SUPERFAMILY SSF75169 5 118 1.21E-9 T 14-10-2018 IPR027396 DsrEFH-like C4901_14910 858b47850488cbbfa77b16dcfc35a394 129 Gene3D G3DSA:3.40.1260.10 1 129 4.5E-17 T 14-10-2018 IPR027396 DsrEFH-like C4901_11350 1f024e4995ff94b27cd8f3a9ebf76969 159 Pfam PF03477 ATP cone domain 50 136 1.1E-15 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 C4901_11350 1f024e4995ff94b27cd8f3a9ebf76969 159 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.9E-61 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 C4901_11350 1f024e4995ff94b27cd8f3a9ebf76969 159 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 82.989 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 C4901_01325 cba6b349aaa9690c500e280a9c80bf7f 144 SUPERFAMILY SSF55718 36 130 6.47E-10 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C4901_01325 cba6b349aaa9690c500e280a9c80bf7f 144 Pfam PF02036 SCP-2 sterol transfer family 43 128 2.1E-9 T 14-10-2018 IPR003033 SCP2 sterol-binding domain C4901_06310 2e220cc5dfae007bdc7e3a25a3384d8f 463 Pfam PF01566 Natural resistance-associated macrophage protein 85 430 2.6E-80 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 C4901_06310 2e220cc5dfae007bdc7e3a25a3384d8f 463 PRINTS PR00447 Natural resistance-associated macrophage protein signature 246 269 2.2E-20 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 C4901_06310 2e220cc5dfae007bdc7e3a25a3384d8f 463 PRINTS PR00447 Natural resistance-associated macrophage protein signature 402 421 2.2E-20 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 C4901_06310 2e220cc5dfae007bdc7e3a25a3384d8f 463 PRINTS PR00447 Natural resistance-associated macrophage protein signature 143 169 2.2E-20 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 C4901_09980 3a0e2e77e04e184b935a641705fbd909 549 Gene3D G3DSA:3.50.50.60 449 547 4.2E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_09980 3a0e2e77e04e184b935a641705fbd909 549 Pfam PF00732 GMC oxidoreductase 38 329 1.0E-19 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 C4901_09980 3a0e2e77e04e184b935a641705fbd909 549 Pfam PF05199 GMC oxidoreductase 419 535 1.6E-26 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 C4901_09980 3a0e2e77e04e184b935a641705fbd909 549 SUPERFAMILY SSF54373 345 472 7.85E-16 T 14-10-2018 C4901_09980 3a0e2e77e04e184b935a641705fbd909 549 SUPERFAMILY SSF51905 36 543 2.33E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily C4901_09755 7ed1e2f331a29c54b5a99cb651e1e4d5 180 Pfam PF12281 Nucleotidyltransferase 110 153 3.0E-4 T 14-10-2018 IPR022550 Nucleotidyltransferase 8 C4901_08895 c3012df3b02e76dcbd4e78773674d5d3 69 Pfam PF11127 Protein of unknown function (DUF2892) 1 61 4.8E-21 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 C4901_09340 eef3b14a24fd4e7daba7ccc1166ff03d 333 Pfam PF13614 AAA domain 4 196 2.4E-15 T 14-10-2018 IPR025669 AAA domain C4901_09340 eef3b14a24fd4e7daba7ccc1166ff03d 333 Gene3D G3DSA:3.40.50.300 2 287 2.4E-36 T 14-10-2018 C4901_09340 eef3b14a24fd4e7daba7ccc1166ff03d 333 SUPERFAMILY SSF52540 1 263 3.62E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_04800 90b646baaa5e96073d14497af3565ef9 128 Pfam PF02411 MerT mercuric transport protein 16 117 1.8E-20 T 14-10-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 C4901_09585 fe8d04b475783ccb9b500912c1816103 157 Pfam PF05258 Protein of unknown function (DUF721) 35 96 3.2E-6 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 C4901_00985 978b26270320f1ffe4b532de64a232fd 96 Pfam PF12674 Putative zinc ribbon domain 15 86 3.3E-11 T 14-10-2018 IPR025868 Putative zinc ribbon domain C4901_04880 37a585db9a514bdea893cd97bb9d8c94 79 Pfam PF10049 Protein of unknown function (DUF2283) 4 50 2.4E-12 T 14-10-2018 IPR019270 Protein of unknown function DUF2283 C4901_08235 c041635eaced35004ae96d07e49a7882 98 Gene3D G3DSA:1.10.1660.10 13 98 5.1E-17 T 14-10-2018 C4901_08235 c041635eaced35004ae96d07e49a7882 98 Pfam PF13591 MerR HTH family regulatory protein 18 94 2.7E-11 T 14-10-2018 C4901_15905 599426b6a1cde44142a06a407daed1be 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 C4901_15905 599426b6a1cde44142a06a407daed1be 313 Gene3D G3DSA:3.40.1190.20 1 312 7.3E-104 T 14-10-2018 IPR029056 Ribokinase-like C4901_15905 599426b6a1cde44142a06a407daed1be 313 SUPERFAMILY SSF53613 2 292 1.4E-59 T 14-10-2018 IPR029056 Ribokinase-like C4901_15905 599426b6a1cde44142a06a407daed1be 313 Pfam PF00294 pfkB family carbohydrate kinase 38 290 2.7E-33 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB C4901_08615 88632946a4635acaa6992cb97afb98f8 219 ProDom PD037531 MEMBRANE HYDROGENASE SUBUNIT COMPONENT HYDROGENASE-4 E OXIDOREDUCTASE PRECURSOR SIGNAL 1.-.-.- 25 185 2.0E-28 T 14-10-2018 C4901_10855 6ac6492bf83fd55d952e2d6f0463078f 134 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 124 1.0E-67 T 14-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C4901_10855 6ac6492bf83fd55d952e2d6f0463078f 134 Pfam PF01592 NifU-like N terminal domain 3 126 1.2E-56 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 C4901_10855 6ac6492bf83fd55d952e2d6f0463078f 134 SUPERFAMILY SSF82649 1 130 2.88E-49 T 14-10-2018 C4901_10855 6ac6492bf83fd55d952e2d6f0463078f 134 Gene3D G3DSA:3.90.1010.10 1 133 8.2E-59 T 14-10-2018 C4901_07520 b34741fcd2a681c9756d55c2774927b3 130 Pfam PF07592 Rhodopirellula transposase DDE domain 2 78 9.4E-37 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_02485 66eacfdd0f3f63ab9431b59c1f23385d 500 Pfam PF01609 Transposase DDE domain 338 474 3.5E-5 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 C4901_07510 21a91836d91d7c14dc0b348ea03de17f 286 Pfam PF07592 Rhodopirellula transposase DDE domain 74 283 1.5E-93 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_10935 f20c45846aa9a58320b477be894f163f 225 Pfam PF07077 Protein of unknown function (DUF1345) 40 216 2.3E-56 T 14-10-2018 IPR009781 Protein of unknown function DUF1345 C4901_07600 007cceb472edc34984944aee48f025e7 79 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 9 29 9.6E-5 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 C4901_07600 007cceb472edc34984944aee48f025e7 79 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 53 73 1.3E-4 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 C4901_07600 007cceb472edc34984944aee48f025e7 79 SUPERFAMILY SSF57783 44 76 1.0E-7 T 14-10-2018 C4901_05020 8629afb4bbe316e7047c737fe751b6cc 344 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 289 6.6E-27 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C4901_05020 8629afb4bbe316e7047c737fe751b6cc 344 Pfam PF01548 Transposase 6 146 1.2E-15 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C4901_13625 65a1f9e35bf8110695f4628b165a9f03 108 Pfam PF14236 Domain of unknown function (DUF4338) 8 105 2.0E-33 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_09765 077e2ee2b04df19e4851f451c0f65087 249 Pfam PF00149 Calcineurin-like phosphoesterase 10 206 1.4E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 C4901_09765 077e2ee2b04df19e4851f451c0f65087 249 SUPERFAMILY SSF56300 10 217 1.58E-23 T 14-10-2018 C4901_13655 da30b1540009d0bb8b5f4245dc96cb0a 238 Pfam PF01610 Transposase 96 225 5.4E-34 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_13655 da30b1540009d0bb8b5f4245dc96cb0a 238 Pfam PF01610 Transposase 10 84 1.4E-18 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_04405 e6ef09db989cb2fff3f726d3c9df3063 136 Gene3D G3DSA:2.60.120.10 1 131 2.0E-50 T 14-10-2018 IPR014710 RmlC-like jelly roll fold C4901_04405 e6ef09db989cb2fff3f726d3c9df3063 136 Pfam PF07883 Cupin domain 42 102 1.1E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel C4901_04405 e6ef09db989cb2fff3f726d3c9df3063 136 SUPERFAMILY SSF51182 9 132 2.19E-31 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily C4901_06725 32dc118af0bdbd7e8e9adb6f50f2004b 202 Pfam PF14236 Domain of unknown function (DUF4338) 2 186 1.9E-54 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_07255 c6b8570b973d04c5e14a30af25d978ed 222 TIGRFAM TIGR03424 urea_degr_1: urea carboxylase-associated protein 1 16 217 1.5E-97 T 14-10-2018 IPR017791 Urea carboxylase-associated protein 1 C4901_07255 c6b8570b973d04c5e14a30af25d978ed 222 Pfam PF09347 Domain of unknown function (DUF1989) 21 191 4.0E-64 T 14-10-2018 IPR018959 Protein of unknown function DUF1989 C4901_04125 4553483ccb0e23a0bdadc4a789012a5a 304 Pfam PF11004 3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase 21 291 7.6E-112 T 14-10-2018 IPR021266 Kdo hydroxylase C4901_13440 d4a46a0239a4b5df205fbe162f75e4d5 415 Pfam PF07958 Protein of unknown function (DUF1688) 23 415 1.6E-126 T 14-10-2018 IPR012469 Protein of unknown function DUF1688 C4901_15165 bf4cb98266363ae3483805d79d6c364e 73 SUPERFAMILY SSF143120 1 42 5.1E-8 T 14-10-2018 IPR036165 YefM-like superfamily C4901_15165 bf4cb98266363ae3483805d79d6c364e 73 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 44 3.1E-7 T 14-10-2018 C4901_15165 bf4cb98266363ae3483805d79d6c364e 73 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 41 3.8E-10 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM C4901_02540 41520132be032bfee6dbd273ad60d0e7 326 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 311 1.6E-99 T 14-10-2018 IPR007296 Domain of unknown function DUF403 C4901_09265 1c849b64b7c048a6c25ff0a920aadf6f 71 SUPERFAMILY SSF47598 5 44 7.78E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_11135 6cb46f03c6b5d34d2cd99b31904c3263 71 Pfam PF08681 Protein of unknown function (DUF1778) 10 36 1.6E-4 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 C4901_01210 661d1f6547da6dab3ff5f6f1bec467cf 201 SUPERFAMILY SSF47240 7 157 4.87E-10 T 14-10-2018 IPR009078 Ferritin-like superfamily C4901_01210 661d1f6547da6dab3ff5f6f1bec467cf 201 Gene3D G3DSA:1.20.120.660 2 93 2.7E-8 T 14-10-2018 C4901_01170 098c5ac29b0e6f438a70e39995569b37 113 SUPERFAMILY SSF101386 8 100 1.96E-13 T 14-10-2018 C4901_01170 098c5ac29b0e6f438a70e39995569b37 113 Gene3D G3DSA:1.10.287.1080 12 101 4.1E-11 T 14-10-2018 C4901_01170 098c5ac29b0e6f438a70e39995569b37 113 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 29 86 1.6E-5 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 C4901_06300 9f3f8837fc9418336e6e7563df8ee650 338 Gene3D G3DSA:1.10.287.110 183 238 5.0E-6 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C4901_06300 9f3f8837fc9418336e6e7563df8ee650 338 SUPERFAMILY SSF46565 184 223 4.71E-6 T 14-10-2018 IPR036869 Chaperone J-domain superfamily C4901_09160 e53c64a307c2c5c4d244e8f6bbbbd2cd 298 Pfam PF14236 Domain of unknown function (DUF4338) 62 287 4.4E-71 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_15390 ab5dfbcfdd40c9bea78095f269ed819e 255 SUPERFAMILY SSF52540 1 107 7.59E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_11805 08f2822e14e7bbebe8ac65b1e77e57ef 427 Pfam PF04932 O-Antigen ligase 202 346 4.4E-17 T 14-10-2018 IPR007016 O-antigen ligase-related C4901_05935 bcc7acca79eb9761bfca7ababe54d938 566 Gene3D G3DSA:3.20.110.20 191 484 2.0E-21 T 14-10-2018 C4901_05935 bcc7acca79eb9761bfca7ababe54d938 566 SUPERFAMILY SSF88713 7 454 8.23E-84 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 C4901_05935 bcc7acca79eb9761bfca7ababe54d938 566 Pfam PF03065 Glycosyl hydrolase family 57 11 467 5.9E-68 T 14-10-2018 IPR004300 Glycoside hydrolase family 57, N-terminal domain GO:0003824|GO:0005975 C4901_07740 57c960ce597e2248a32ebcfdeaf26166 340 PIRSF PIRSF028561 1 321 4.2E-80 T 14-10-2018 IPR014548 Predicted acyltransferase C4901_07740 57c960ce597e2248a32ebcfdeaf26166 340 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 85 297 3.4E-9 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 C4901_05005 66aa9e966ba93d97e9ee572bad57bc4e 248 Pfam PF01203 Type II secretion system (T2SS), protein N 40 242 4.5E-19 T 14-10-2018 IPR022792 Type II secretion system, protein N C4901_10035 0365a2317fac39c503ff4cb9b5250ca1 108 Gene3D G3DSA:3.30.70.120 1 108 8.9E-30 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal C4901_10035 0365a2317fac39c503ff4cb9b5250ca1 108 SUPERFAMILY SSF54913 5 106 2.19E-17 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta C4901_12520 43e0e78ee547b1ec7386e28d16237b3d 166 Pfam PF06271 RDD family 3 143 2.4E-17 T 14-10-2018 IPR010432 RDD C4901_11415 c7375dd86319e568f71f347866790c39 297 Pfam PF14236 Domain of unknown function (DUF4338) 65 294 3.8E-61 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_11570 981382b1ce4d205ebb77649f4bdd79cf 167 Pfam PF12760 Transposase zinc-ribbon domain 15 62 5.7E-15 T 14-10-2018 IPR024442 Transposase, zinc-ribbon C4901_01835 5fa1b360611591071ae81f0a8b5c37b2 770 SUPERFAMILY SSF52540 365 687 3.4E-10 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_08630 39d4d0555fc846468802ea5979f96808 177 SUPERFAMILY SSF90257 98 169 1.54E-5 T 14-10-2018 C4901_08630 39d4d0555fc846468802ea5979f96808 177 Pfam PF11740 Plasmid replication region DNA-binding N-term 7 120 5.2E-21 T 14-10-2018 IPR021104 KfrA, N-terminal DNA-binding domain C4901_07495 14441ab02312321b357c834e98cb193a 298 Pfam PF01610 Transposase 40 274 3.3E-61 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_06820 d886fa122d4250cd191f8b2ae238c8d4 421 Pfam PF03916 Polysulphide reductase, NrfD 44 337 4.5E-49 T 14-10-2018 IPR005614 NrfD family C4901_07745 b741015d60172cdfea3bdba41f979897 158 Gene3D G3DSA:2.50.20.10 2 157 1.1E-8 T 14-10-2018 C4901_08260 981bde3b6a6bc6d4daac175a3219af2a 147 Gene3D G3DSA:3.90.79.10 3 144 2.4E-34 T 14-10-2018 C4901_08260 981bde3b6a6bc6d4daac175a3219af2a 147 Pfam PF00293 NUDIX domain 7 119 2.6E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 C4901_08260 981bde3b6a6bc6d4daac175a3219af2a 147 SUPERFAMILY SSF55811 4 133 1.26E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 C4901_02140 dfb01de5b952ab3c6bec996601317e4c 123 Pfam PF01610 Transposase 24 110 2.9E-17 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_11775 6fe48cd31b43b62f0db846cf71e804dc 628 Pfam PF13320 Domain of unknown function (DUF4091) 505 577 4.1E-15 T 14-10-2018 IPR025150 Domain of unknown function DUF4091 C4901_07050 8b6f6a3161a461e29c94ed68f0ac0951 125 Pfam PF10861 Protein of Unknown function (DUF2784) 7 121 7.2E-25 T 14-10-2018 IPR021218 Protein of unknown function DUF2784 C4901_04810 3e38d5f157740cafa9834f18570552c2 447 Gene3D G3DSA:1.10.1130.10 104 298 5.3E-17 T 14-10-2018 C4901_04810 3e38d5f157740cafa9834f18570552c2 447 SUPERFAMILY SSF48695 75 283 8.27E-26 T 14-10-2018 IPR036280 Multiheme cytochrome superfamily C4901_04810 3e38d5f157740cafa9834f18570552c2 447 Pfam PF13435 Cytochrome c554 and c-prime 113 193 1.1E-7 T 14-10-2018 IPR023155 Cytochrome c-552/4 C4901_10905 ca4e1837d8f55b1ce22e8811ab7dc481 330 Pfam PF01578 Cytochrome C assembly protein 135 326 4.4E-34 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 C4901_08510 faa152e347df2c04155735bd4cd04f5f 92 Pfam PF14076 Domain of unknown function (DUF4258) 8 75 4.3E-16 T 14-10-2018 IPR025354 Protein of unknown function DUF4258 C4901_02505 352b381891b59af9177734f7c1bcc4d6 119 Pfam PF13310 Virulence protein RhuM family 1 91 6.2E-21 T 14-10-2018 IPR011204 Virulence protein RhuM-like C4901_06325 e7376da687617203e58aac8b13a0fb5c 289 Pfam PF14236 Domain of unknown function (DUF4338) 62 288 2.5E-71 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_02310 3e8f370a32311b349004cc2eca7e04a6 229 Gene3D G3DSA:3.30.450.40 44 226 1.8E-37 T 14-10-2018 IPR029016 GAF-like domain superfamily C4901_02310 3e8f370a32311b349004cc2eca7e04a6 229 Pfam PF04340 Protein of unknown function, DUF484 12 224 1.2E-35 T 14-10-2018 IPR007435 Protein of unknown function DUF484 C4901_00595 958fdeb91ae896aba221167c244b960f 145 SUPERFAMILY SSF54637 6 119 2.36E-7 T 14-10-2018 IPR029069 HotDog domain superfamily C4901_00595 958fdeb91ae896aba221167c244b960f 145 Gene3D G3DSA:3.10.129.10 1 139 3.3E-6 T 14-10-2018 C4901_07455 f11b37a3d204a0ab3cf279d18b1d904e 64 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 6 62 1.7E-6 T 14-10-2018 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 C4901_13230 447c918b9265d87b5273127ba9aa2479 649 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 156 226 4.9E-13 T 14-10-2018 IPR029095 NarX-like, N-terminal C4901_01365 8c3b33c850fefc5a0151f853016e6261 150 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 24 143 2.6E-17 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III C4901_11575 1f6e5be94b5d570ca5bcb0732b63b98e 313 Pfam PF14279 HNH endonuclease 40 92 2.0E-7 T 14-10-2018 IPR029471 HNH endonuclease 5 C4901_00105 dffce0a2d2d97aaa83608d39fcce5803 630 Pfam PF05170 AsmA family 2 141 2.1E-18 T 14-10-2018 IPR007844 AsmA C4901_00105 dffce0a2d2d97aaa83608d39fcce5803 630 Pfam PF05170 AsmA family 383 545 2.7E-21 T 14-10-2018 IPR007844 AsmA C4901_00900 3eda7815eca4e80e98764e5d4ab9a607 198 SUPERFAMILY SSF55718 11 116 1.88E-5 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily C4901_00900 3eda7815eca4e80e98764e5d4ab9a607 198 Pfam PF02036 SCP-2 sterol transfer family 19 109 1.1E-10 T 14-10-2018 IPR003033 SCP2 sterol-binding domain C4901_14700 29e30a0dbf4cd92de856bd07da9ef034 176 Pfam PF04891 NifQ 21 174 2.0E-51 T 14-10-2018 IPR006975 NifQ GO:0009399|GO:0030151 C4901_11435 0e23a94510ac9552e792e45420393ccf 243 Pfam PF01610 Transposase 14 225 6.1E-61 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_01435 1d1fd40237f9e18a4ae9bb8107844525 163 Pfam PF04093 rod shape-determining protein MreD 10 154 1.8E-23 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 C4901_01435 1d1fd40237f9e18a4ae9bb8107844525 163 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 1.2E-32 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 C4901_01435 1d1fd40237f9e18a4ae9bb8107844525 163 PIRSF PIRSF018472 1 163 1.1E-47 T 14-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type C4901_01250 3052257293d727cbf2bc435dedf788c0 138 Pfam PF01814 Hemerythrin HHE cation binding domain 4 114 4.6E-16 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 C4901_01250 3052257293d727cbf2bc435dedf788c0 138 Gene3D G3DSA:1.20.120.520 3 133 2.9E-17 T 14-10-2018 C4901_06210 27393649f087a8335983ee6cd40f55c9 41 Pfam PF14236 Domain of unknown function (DUF4338) 2 40 3.4E-9 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_12580 35cedcf4b6dd7476d6abec5f7e1533db 221 SUPERFAMILY SSF46626 123 205 1.77E-10 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_12580 35cedcf4b6dd7476d6abec5f7e1533db 221 Gene3D G3DSA:1.10.760.10 124 211 4.9E-8 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 C4901_12580 35cedcf4b6dd7476d6abec5f7e1533db 221 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 130 201 4.9E-6 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 C4901_06585 f250dff7de94067434a150f80ef3fcb1 112 Pfam PF13657 HipA N-terminal domain 7 56 4.1E-6 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 C4901_14685 82aee7d5de26fdcc252ee59996ba2b96 282 Pfam PF03692 Putative zinc- or iron-chelating domain 31 132 3.1E-10 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein C4901_13640 22240001ae27647d98f7a6d40075b0ff 82 Pfam PF03050 Transposase IS66 family 3 52 3.8E-8 T 14-10-2018 IPR004291 Transposase, IS66 C4901_14635 4eba7cf564f87263606b6d21c81d83e7 203 SUPERFAMILY SSF53335 11 172 2.28E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase C4901_14635 4eba7cf564f87263606b6d21c81d83e7 203 Pfam PF07021 Methionine biosynthesis protein MetW 5 196 2.4E-81 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 C4901_14635 4eba7cf564f87263606b6d21c81d83e7 203 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 5 197 5.1E-83 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 C4901_14635 4eba7cf564f87263606b6d21c81d83e7 203 Gene3D G3DSA:3.40.50.150 7 177 4.1E-27 T 14-10-2018 C4901_16115 5857b2161bad0332bc4389859b029347 136 Pfam PF03653 Uncharacterised protein family (UPF0093) 2 134 1.2E-43 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 C4901_16115 5857b2161bad0332bc4389859b029347 136 PIRSF PIRSF004638 1 136 7.6E-48 T 14-10-2018 IPR005265 Uncharacterised protein family UPF0093 C4901_07760 a91db231291798659e1f0bf0e972162d 268 Gene3D G3DSA:3.40.47.10 17 186 2.6E-8 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_07760 a91db231291798659e1f0bf0e972162d 268 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 49 203 1.4E-23 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal C4901_07760 a91db231291798659e1f0bf0e972162d 268 SUPERFAMILY SSF53901 7 177 3.46E-10 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 C4901_15895 1415dad498cf5da656cfbd9a1516d7f6 221 Pfam PF14342 Domain of unknown function (DUF4396) 77 218 1.3E-39 T 14-10-2018 IPR025509 Domain of unknown function DUF4396 C4901_11700 048fc33d0816d030061dde3990ffedb8 424 Pfam PF01610 Transposase 158 396 3.8E-73 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_15120 2c715f165e8410f53c76651c2e7cf4e3 153 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 83 128 5.6E-16 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 C4901_15120 2c715f165e8410f53c76651c2e7cf4e3 153 Pfam PF12728 Helix-turn-helix domain 83 130 2.5E-11 T 14-10-2018 C4901_06535 2ebccdb7824092524be18ed57da2e486 93 SUPERFAMILY SSF47598 4 50 9.67E-11 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_06535 2ebccdb7824092524be18ed57da2e486 93 Gene3D G3DSA:1.10.8.1250 13 92 1.5E-9 T 14-10-2018 IPR038296 Antitoxin ParD superfamily C4901_06535 2ebccdb7824092524be18ed57da2e486 93 Pfam PF03693 Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH 6 56 3.0E-5 T 14-10-2018 IPR022789 Antitoxin ParD C4901_08315 37b1fd55ec2ca4b15bd96f0c32de0033 235 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 3 230 39.352 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 C4901_08315 37b1fd55ec2ca4b15bd96f0c32de0033 235 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 103 223 4.8E-36 T 14-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 C4901_08315 37b1fd55ec2ca4b15bd96f0c32de0033 235 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 13 83 5.1E-17 T 14-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 C4901_08315 37b1fd55ec2ca4b15bd96f0c32de0033 235 PIRSF PIRSF037208 2 234 6.4E-83 T 14-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 C4901_08315 37b1fd55ec2ca4b15bd96f0c32de0033 235 SUPERFAMILY SSF55729 79 231 4.94E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase C4901_11785 b3b1dc46411ea32c908bd45b7654a854 232 Pfam PF07282 Putative transposase DNA-binding domain 140 206 1.0E-11 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_15155 3d5baf9f2b1adb01572dc09e120f621d 275 Pfam PF07592 Rhodopirellula transposase DDE domain 31 191 4.2E-80 T 14-10-2018 IPR011518 Transposase, Rhodopirellula-type C4901_13305 01de6426bb161a71a0e5e0d6b11b58d3 133 Gene3D G3DSA:3.30.420.270 60 127 3.8E-10 T 14-10-2018 C4901_13305 01de6426bb161a71a0e5e0d6b11b58d3 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 131 9.9E-26 T 14-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 C4901_05305 d68a4ba4237cbd3e4dad7d5d7f1141b3 81 Gene3D G3DSA:3.60.15.10 7 81 1.0E-7 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like C4901_13310 4089d3d51fb10bf4ec1e94a21c3bdbdd 238 Pfam PF01618 MotA/TolQ/ExbB proton channel family 88 199 2.4E-25 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C4901_06070 ad52d4afdbc59858a7f32539312bd94d 108 SUPERFAMILY SSF50475 8 82 4.58E-9 T 14-10-2018 C4901_06070 ad52d4afdbc59858a7f32539312bd94d 108 Gene3D G3DSA:2.30.110.10 2 103 1.3E-14 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 C4901_06070 ad52d4afdbc59858a7f32539312bd94d 108 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 89 2.6E-7 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 C4901_03080 e5d96ad48a9381c2064d9951aeaee91c 188 SUPERFAMILY SSF56925 52 188 1.73E-7 T 14-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel C4901_07845 eafe943cfbe5529c4d204d21e9988b6d 431 Pfam PF04286 Protein of unknown function (DUF445) 59 429 1.4E-86 T 14-10-2018 IPR007383 Protein of unknown function DUF445 C4901_10605 4ae9a3ffc3536f5b201e090e22992f66 60 Pfam PF13396 Phospholipase_D-nuclease N-terminal 13 55 1.7E-11 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal C4901_03725 8507a7f2c1888fc1b6077eb7d7371e62 303 PRINTS PR00758 Arsenical pump membrane protein signature 271 295 7.2E-52 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03725 8507a7f2c1888fc1b6077eb7d7371e62 303 PRINTS PR00758 Arsenical pump membrane protein signature 196 218 7.2E-52 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03725 8507a7f2c1888fc1b6077eb7d7371e62 303 PRINTS PR00758 Arsenical pump membrane protein signature 238 263 7.2E-52 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03725 8507a7f2c1888fc1b6077eb7d7371e62 303 PRINTS PR00758 Arsenical pump membrane protein signature 151 175 7.2E-52 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03725 8507a7f2c1888fc1b6077eb7d7371e62 303 Pfam PF02040 Arsenical pump membrane protein 145 299 2.4E-55 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 C4901_03660 c1d737818919396db96ded399905de23 197 Pfam PF01548 Transposase 8 137 1.6E-11 T 14-10-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 C4901_10240 dae05b9874d5c225427dea24352efea7 176 Pfam PF09335 SNARE associated Golgi protein 43 162 8.4E-19 T 14-10-2018 IPR032816 SNARE associated Golgi protein C4901_15420 4d9b748cb78ecc371b4f0fc7741bd7f6 419 Pfam PF01610 Transposase 156 390 7.3E-64 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_15420 4d9b748cb78ecc371b4f0fc7741bd7f6 419 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 91 140 2.3E-8 T 14-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain C4901_11970 8228613cdad8339e83ab58176e8cd151 116 SUPERFAMILY SSF49329 11 113 4.84E-5 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 C4901_11405 1b43a02613cb54547cc042c2fe10b66b 212 Gene3D G3DSA:1.10.150.130 57 164 1.0E-9 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal C4901_11405 1b43a02613cb54547cc042c2fe10b66b 212 SUPERFAMILY SSF56349 64 191 1.29E-13 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 C4901_00085 1c37ffe7a12281f85b4bd90109b80738 450 Pfam PF07282 Putative transposase DNA-binding domain 327 395 4.3E-16 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_00235 d4aab6178412e9aa5ae15dee5a5e85b9 222 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 68 209 1.2E-7 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase C4901_00235 d4aab6178412e9aa5ae15dee5a5e85b9 222 Gene3D G3DSA:3.30.530.20 70 213 6.5E-11 T 14-10-2018 IPR023393 START-like domain superfamily C4901_00235 d4aab6178412e9aa5ae15dee5a5e85b9 222 SUPERFAMILY SSF55961 69 210 8.68E-14 T 14-10-2018 C4901_00935 f3b2795a4f5eba1946ab003f54f10ceb 348 Pfam PF04338 Protein of unknown function, DUF481 140 347 8.7E-36 T 14-10-2018 IPR007433 Protein of unknown function DUF481 C4901_14565 56abe60d7cd716dc2fa213810084def1 162 SUPERFAMILY SSF53271 4 150 5.38E-32 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like C4901_14565 56abe60d7cd716dc2fa213810084def1 162 Gene3D G3DSA:3.40.50.2020 3 153 1.9E-38 T 14-10-2018 C4901_14565 56abe60d7cd716dc2fa213810084def1 162 Pfam PF00156 Phosphoribosyl transferase domain 6 144 1.6E-18 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 C4901_03695 08d9463c39eb5ed3a1048c66ef33a31a 122 Pfam PF13358 DDE superfamily endonuclease 19 122 1.1E-16 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain C4901_12625 9480af8da4ff9264785695781d9d29e3 213 Pfam PF04143 Sulphur transport 51 202 2.5E-18 T 14-10-2018 IPR007272 Sulphur transport domain C4901_16710 b35281cc3c3858aa650dc9a388f62b0c 450 Pfam PF07282 Putative transposase DNA-binding domain 327 395 4.3E-16 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_15545 a8d0a2e6aab8ff7caaf2cd54247c404c 262 TIGRFAM TIGR04255 sporadTIGR04255: TIGR04255 family protein 3 261 1.3E-44 T 14-10-2018 IPR026349 Conserved hypothetical protein CHP04255 C4901_11410 64d1e2ceeed196c79fbe28ad467e0868 562 Pfam PF03050 Transposase IS66 family 208 501 8.6E-42 T 14-10-2018 IPR004291 Transposase, IS66 C4901_10215 412a6c567794b5ad97463b844f1f312b 335 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 138 206 1.6E-6 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal C4901_12660 36dff17ef61c54258604a141d36b6b18 172 Gene3D G3DSA:3.40.50.300 19 131 3.4E-33 T 14-10-2018 C4901_12660 36dff17ef61c54258604a141d36b6b18 172 SUPERFAMILY SSF52540 19 132 3.19E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_15260 3b6bc9f9ab4ddcdf06bf54b6e02d73ce 143 Gene3D G3DSA:3.30.2310.20 67 128 2.1E-7 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_15260 3b6bc9f9ab4ddcdf06bf54b6e02d73ce 143 Gene3D G3DSA:3.30.2310.20 1 66 2.8E-13 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily C4901_15260 3b6bc9f9ab4ddcdf06bf54b6e02d73ce 143 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 61 2.7E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family C4901_06920 2b9b30b6bfe1fce11c1232bcce57cf1d 442 SUPERFAMILY SSF53098 97 383 1.71E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily C4901_16435 1530167328e40f1023e95d8a691a3ec0 82 SUPERFAMILY SSF47598 2 67 3.2E-16 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 C4901_16435 1530167328e40f1023e95d8a691a3ec0 82 Gene3D G3DSA:1.10.1220.10 10 57 1.1E-10 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 C4901_07685 4298396f3fbe74916bb0085fd22486ab 265 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 64 221 2.6E-21 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like C4901_08620 c06016f8d7d22f7481639d07cc06b6e0 315 Pfam PF00146 NADH dehydrogenase 13 307 2.5E-37 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 C4901_00760 0378a589d0180275636129d67cd9fb37 177 Pfam PF07798 Protein of unknown function (DUF1640) 7 148 2.4E-7 T 14-10-2018 IPR024461 Coiled-coil domain-containing protein 90-like C4901_06915 5cae1d10f713f227777668b91711f411 272 Pfam PF09407 AbiEi antitoxin C-terminal domain 74 215 3.7E-18 T 14-10-2018 IPR018547 AbiEi antitoxin C-terminal domain C4901_12525 ce331adaf9ee1339f8f18afe898465bf 349 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 347 2.1E-96 T 14-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 C4901_12525 ce331adaf9ee1339f8f18afe898465bf 349 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 345 2.5E-54 T 14-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 C4901_06630 63808b90572aabb98c0dbd2f83733f9e 104 Pfam PF01610 Transposase 7 92 1.2E-24 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_13425 e0c9ebef0bd66141ffe6ccf03275401a 449 Gene3D G3DSA:1.10.4160.10 7 431 1.4E-33 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily C4901_05040 e5cd930d127c88dd646078530053f604 66 Pfam PF09957 Bacterial antitoxin of type II TA system, VapB 1 47 6.9E-14 T 14-10-2018 IPR019239 Bacterial antitoxin of type II TA system, VapB C4901_00615 7e3afe533eb40a36da03d3069e75a656 220 Pfam PF14236 Domain of unknown function (DUF4338) 4 131 1.2E-29 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_03810 38b78cc4cbdd93fbb5770c294e318201 153 Pfam PF05425 Copper resistance protein D 47 147 5.0E-8 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 C4901_02015 501201922d3e4bb5862d7accfac55617 454 Pfam PF09903 Uncharacterized protein conserved in bacteria (DUF2130) 200 443 1.2E-60 T 14-10-2018 IPR019219 Protein of unknown function DUF2130 C4901_13585 0fa43ee1537453d90be26e7b69bb6b41 263 Pfam PF02371 Transposase IS116/IS110/IS902 family 122 195 2.8E-24 T 14-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 C4901_10455 98058279121294a13f0089c0d229642c 99 Pfam PF06182 ABC-2 family transporter protein 2 96 3.7E-11 T 14-10-2018 IPR010390 Protein of unknown function DUF990 C4901_14430 6433f5212280b3ae9b03bfda3c4ace50 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 87 191 1.4E-26 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel C4901_01375 84059aacc7f7d3b6b9e1cf03c1a98337 264 Pfam PF02698 DUF218 domain 80 243 1.4E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 C4901_13750 088a4a63b201f02a5a146179fad9cb65 108 Pfam PF01610 Transposase 22 100 1.4E-13 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain C4901_07095 5948b7c99d7351c13f568ff349f331cd 125 Pfam PF16137 Domain of unknown function (DUF4845) 30 116 6.5E-17 T 14-10-2018 IPR032314 Protein of unknown function DUF4845 C4901_15695 2c99706faaa46e16f31b68a65021efda 79 Pfam PF14236 Domain of unknown function (DUF4338) 10 75 1.7E-18 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_13160 28127f2a783f0cef7566bacd35188341 441 Pfam PF14236 Domain of unknown function (DUF4338) 46 270 4.9E-59 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_15125 aab8dedcfde8671939f39f940646bf97 190 Pfam PF13470 PIN domain 7 114 3.7E-10 T 14-10-2018 IPR002716 PIN domain C4901_06960 53f471fcd1858ac4a07e7946817497ef 241 Pfam PF12276 Protein of unknown function (DUF3617) 101 235 3.4E-9 T 14-10-2018 IPR022061 Protein of unknown function DUF3617 C4901_05530 6ae8155557d174e2add7b1504c0871a5 93 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 31 89 1.5E-19 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system C4901_03485 dfd6f85babdb48f348cd9faa3308f57e 198 Pfam PF14236 Domain of unknown function (DUF4338) 73 152 3.0E-18 T 14-10-2018 IPR025639 Domain of unknown function DUF4338 C4901_10450 df462f43f8cb84b69b3742266d630186 268 Pfam PF06182 ABC-2 family transporter protein 40 267 1.0E-39 T 14-10-2018 IPR010390 Protein of unknown function DUF990 C4901_00165 fbc2c96afa35bca1f17e5a58c7f096e3 569 Pfam PF02470 MlaD protein 60 150 6.3E-9 T 14-10-2018 IPR003399 Mce/MlaD C4901_03605 c611074e1e09fe8af0406c503871373f 449 Pfam PF02754 Cysteine-rich domain 343 419 0.15 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_03605 c611074e1e09fe8af0406c503871373f 449 Pfam PF02754 Cysteine-rich domain 211 296 4.1E-8 T 14-10-2018 IPR004017 Cysteine-rich domain C4901_14660 867fee54fc43883de2b80ad11a2d92f9 249 Pfam PF01925 Sulfite exporter TauE/SafE 9 247 1.8E-36 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C4901_01590 0cde530655e8b307899f79b4dc2baf9b 128 Pfam PF01850 PIN domain 4 122 1.1E-9 T 14-10-2018 IPR002716 PIN domain C4901_01590 0cde530655e8b307899f79b4dc2baf9b 128 SUPERFAMILY SSF88723 4 122 3.64E-14 T 14-10-2018 IPR029060 PIN-like domain superfamily C4901_11070 dddfdd9055c327a87ce6938226fca6c7 338 Gene3D G3DSA:1.10.260.40 292 338 9.2E-6 T 14-10-2018 C4901_07545 15c42eac9aa7f7c5bb9be4b76231ae9a 265 Pfam PF06182 ABC-2 family transporter protein 36 262 1.0E-20 T 14-10-2018 IPR010390 Protein of unknown function DUF990 C4901_00890 77ae556d0843e8370ef5d604ee6fd7f5 247 Gene3D G3DSA:2.40.160.170 33 247 2.6E-41 T 14-10-2018 C4901_14330 788ed41c43a984fe96474f4e38671968 311 Pfam PF13391 HNH endonuclease 203 254 4.6E-6 T 14-10-2018 IPR003615 HNH nuclease C4901_16330 45db10f398736dd5a3053213ee57f3f9 191 Pfam PF05137 Fimbrial assembly protein (PilN) 101 176 7.1E-22 T 14-10-2018 IPR007813 Fimbrial assembly PilN C4901_01800 4629c0d07f3e13b33e93c54d2dd52d30 217 Gene3D G3DSA:2.40.160.170 16 217 5.5E-38 T 14-10-2018 C4901_00030 5aa7099b5527851cefe400728fd8b0ab 78 SUPERFAMILY SSF101744 3 74 3.45E-9 T 14-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 C4901_09200 14b8fa1c29e8b100920137cbb5419fe8 294 Pfam PF14267 Domain of unknown function (DUF4357) 223 276 3.4E-22 T 14-10-2018 IPR025579 Domain of unknown function DUF4357 C4901_14300 cbb4df0899a2d5c3c49d6c11a464a62a 136 Pfam PF04519 Polymer-forming cytoskeletal 15 113 1.7E-27 T 14-10-2018 IPR007607 Bactofilin A/B C4901_12305 446efef4106ba69790d8ec98dfd27bd5 240 Pfam PF09601 Protein of unknown function (DUF2459) 54 204 3.4E-27 T 14-10-2018 IPR011727 Conserved hypothetical protein CHP02117 C4901_15265 9ee565b90db3b80fa6c9738b4156f342 84 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 10 57 3.5E-11 T 14-10-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system C4901_11580 11367a95ec1f1cd7820f48b09da9e122 1037 Gene3D G3DSA:3.40.1360.10 200 324 1.3E-5 T 14-10-2018 C4901_11580 11367a95ec1f1cd7820f48b09da9e122 1037 Pfam PF13362 Toprim domain 205 315 1.5E-9 T 14-10-2018 IPR006171 TOPRIM domain C4901_16220 cc77d97403e6a76889b476914e4e9e4e 396 Pfam PF07642 Putative beta-barrel porin-2, OmpL-like. bbp2 43 396 2.2E-49 T 14-10-2018 IPR011486 Putative beta-barrel porin-2, OmpL-like. bbp2 C4901_16625 5dd51f7b3ea72744949c770e12f64040 90 Pfam PF04380 Membrane fusogenic activity 3 74 9.6E-24 T 14-10-2018 IPR007475 Membrane fusogenic activity C4901_14585 1bf623088c08a8163eba421c082463f9 358 Gene3D G3DSA:3.40.50.2000 156 335 1.4E-15 T 14-10-2018 C4901_04785 13eb65c28e7b7a57db2c992b1ff50c52 264 Pfam PF01925 Sulfite exporter TauE/SafE 9 260 1.4E-47 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 C4901_11060 842ebdf86ce468a6a6f09d321d5f925e 984 SUPERFAMILY SSF52540 290 461 2.58E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase C4901_07165 476fbcafa34a82f62edc832470591423 339 Pfam PF01594 AI-2E family transporter 11 327 1.0E-23 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like