locus-tag	class	description
A9R16_000005	PF00308	Bacterial dnaA  protein
A9R16_000005	PF08299	Bacterial dnaA protein helix-turn-helix
A9R16_000005	PF11638	DnaA N-terminal domain
A9R16_000010	PF00712	DNA polymerase III beta subunit, N-terminal domain
A9R16_000010	PF02767	DNA polymerase III beta subunit, central domain
A9R16_000010	PF02768	DNA polymerase III beta subunit, C-terminal domain
A9R16_000015	PF02463	RecF/RecN/SMC N terminal domain
A9R16_000020	PF01751	Toprim domain
A9R16_000020	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_000020	PF18053	DNA gyrase B subunit insert domain
A9R16_000020	PF00986	DNA gyrase B subunit, carboxyl terminus
A9R16_000020	PF00204	DNA gyrase B
A9R16_000030	PF02390	Putative methyltransferase 
A9R16_000035	PF05690	Thiazole biosynthesis protein ThiG
A9R16_000040	PF05690	Thiazole biosynthesis protein ThiG
A9R16_000040	PF02597	ThiS family
A9R16_000065	PF00633	Helix-hairpin-helix motif
A9R16_000065	PF00730	HhH-GPD superfamily base excision DNA repair protein
A9R16_000065	PF14815	NUDIX domain
A9R16_000070	PF04362	Bacterial Fe(2+) trafficking
A9R16_000075	PF01738	Dienelactone hydrolase family
A9R16_000095	PF01381	Helix-turn-helix
A9R16_000125	PF00149	Calcineurin-like phosphoesterase
A9R16_000145	PF00665	Integrase core domain
A9R16_000150	PF01695	IstB-like ATP binding protein
A9R16_000190	PF01266	FAD dependent oxidoreductase
A9R16_000190	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
A9R16_000195	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
A9R16_000195	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
A9R16_000205	PF13419	Haloacid dehalogenase-like hydrolase
A9R16_000220	PF00873	AcrB/AcrD/AcrF family
A9R16_000235	PF13667	ThiC-associated domain 
A9R16_000235	PF01964	Radical SAM ThiC family
A9R16_000255	PF04413	3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
A9R16_000260	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
A9R16_000265	PF00535	Glycosyl transferase family 2
A9R16_000275	PF13439	Glycosyltransferase Family 4
A9R16_000275	PF00534	Glycosyl transferases group 1
A9R16_000280	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
A9R16_000295	PF13537	Glutamine amidotransferase domain
A9R16_000295	PF00733	Asparagine synthase
A9R16_000300	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
A9R16_000305	PF13439	Glycosyltransferase Family 4
A9R16_000305	PF00534	Glycosyl transferases group 1
A9R16_000310	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
A9R16_000335	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
A9R16_000345	PF01063	Amino-transferase class IV
A9R16_000350	PF01596	O-methyltransferase
A9R16_000355	PF07497	Rho termination factor, RNA-binding domain
A9R16_000355	PF07498	Rho termination factor, N-terminal domain
A9R16_000355	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A9R16_000360	PF00085	Thioredoxin
A9R16_000365	PF12300	ATP-dependent RNA helicase RhlB 
A9R16_000365	PF00270	DEAD/DEAH box helicase
A9R16_000365	PF00271	Helicase conserved C-terminal domain
A9R16_000370	PF03079	ARD/ARD' family
A9R16_000375	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
A9R16_000375	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
A9R16_000380	PF00596	Class II Aldolase and Adducin N-terminal domain
A9R16_000400	PF01385	Probable transposase
A9R16_000400	PF07282	Putative transposase DNA-binding domain
A9R16_000400	PF12323	Helix-turn-helix domain
A9R16_000420	PF13098	Thioredoxin-like domain
A9R16_000425	PF01218	Coproporphyrinogen III oxidase
A9R16_000430	PF02843	Phosphoribosylglycinamide synthetase, C domain
A9R16_000430	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
A9R16_000430	PF02844	Phosphoribosylglycinamide synthetase, N domain
A9R16_000435	PF01808	AICARFT/IMPCHase bienzyme
A9R16_000435	PF02142	MGS-like domain
A9R16_000440	PF02954	Bacterial regulatory protein, Fis family
A9R16_000445	PF01207	Dihydrouridine synthase (Dus)
A9R16_000460	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
A9R16_000460	PF00289	Biotin carboxylase, N-terminal domain
A9R16_000460	PF02785	Biotin carboxylase C-terminal domain
A9R16_000465	PF00364	Biotin-requiring enzyme
A9R16_000470	PF01220	Dehydroquinase class II
A9R16_000475	PF00578	AhpC/TSA family
A9R16_000480	PF11412	Disulphide bond corrector protein DsbC
A9R16_000480	PF02683	Cytochrome C biogenesis protein transmembrane region
A9R16_000485	PF03091	CutA1 divalent ion tolerance protein
A9R16_000495	PF04186	FxsA cytoplasmic membrane protein 
A9R16_000500	PF00166	Chaperonin 10 Kd subunit
A9R16_000505	PF00118	TCP-1/cpn60 chaperonin family
A9R16_000525	PF13193	AMP-binding enzyme C-terminal domain
A9R16_000525	PF00668	Condensation domain
A9R16_000525	PF00550	Phosphopantetheine attachment site
A9R16_000525	PF00975	Thioesterase domain
A9R16_000525	PF00501	AMP-binding enzyme
A9R16_000530	PF07977	FabA-like domain
A9R16_000550	PF01494	FAD binding domain
A9R16_000555	PF03006	Haemolysin-III related
A9R16_000565	PF00301	Rubredoxin
A9R16_000570	PF00762	Ferrochelatase
A9R16_000575	PF08543	Phosphomethylpyrimidine kinase
A9R16_000580	PF02581	Thiamine monophosphate synthase
A9R16_000585	PF00202	Aminotransferase class-III
A9R16_000595	PF08448	PAS fold
A9R16_000595	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_000605	PF04379	ApaG domain 
A9R16_000610	PF00149	Calcineurin-like phosphoesterase
A9R16_000615	PF00561	alpha/beta hydrolase fold
A9R16_000620	PF16658	Class II release factor RF3, C-terminal domain
A9R16_000620	PF03144	Elongation factor Tu domain 2
A9R16_000620	PF00009	Elongation factor Tu GTP binding domain
A9R16_000625	PF00009	Elongation factor Tu GTP binding domain
A9R16_000625	PF00679	Elongation factor G C-terminus
A9R16_000625	PF03144	Elongation factor Tu domain 2
A9R16_000635	PF00440	Bacterial regulatory proteins, tetR family
A9R16_000635	PF16925	Tetracyclin repressor-like, C-terminal domain
A9R16_000645	PF02219	Methylenetetrahydrofolate reductase
A9R16_000650	PF05221	S-adenosyl-L-homocysteine hydrolase
A9R16_000650	PF00670	S-adenosyl-L-homocysteine hydrolase, NAD binding domain
A9R16_000655	PF02773	S-adenosylmethionine synthetase, C-terminal domain
A9R16_000655	PF00438	S-adenosylmethionine synthetase, N-terminal domain
A9R16_000655	PF02772	S-adenosylmethionine synthetase, central domain
A9R16_000660	PF01171	PP-loop family
A9R16_000665	PF03279	Bacterial lipid A biosynthesis acyltransferase
A9R16_000675	PF03279	Bacterial lipid A biosynthesis acyltransferase
A9R16_000685	PF01029	NusB family
A9R16_000685	PF01189	16S rRNA methyltransferase RsmB/F
A9R16_000690	PF00551	Formyl transferase
A9R16_000690	PF02911	Formyl transferase, C-terminal domain
A9R16_000695	PF01327	Polypeptide deformylase
A9R16_000705	PF04361	Protein of unknown function (DUF494)
A9R16_000710	PF01131	DNA topoisomerase
A9R16_000710	PF01751	Toprim domain
A9R16_000710	PF13368	Topoisomerase C-terminal repeat
A9R16_000715	PF11412	Disulphide bond corrector protein DsbC
A9R16_000715	PF02683	Cytochrome C biogenesis protein transmembrane region
A9R16_000725	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
A9R16_000725	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
A9R16_000730	PF02556	Preprotein translocase subunit SecB
A9R16_000735	PF00462	Glutaredoxin
A9R16_000740	PF00581	Rhodanese-like domain
A9R16_000750	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
A9R16_000750	PF01676	Metalloenzyme superfamily
A9R16_000755	PF01551	Peptidase family M23
A9R16_000760	PF03572	Peptidase family S41
A9R16_000760	PF13180	PDZ domain
A9R16_000775	PF03109	ABC1 family
A9R16_000790	PF01209	ubiE/COQ5 methyltransferase family
A9R16_000800	PF00072	Response regulator receiver domain
A9R16_000800	PF00486	Transcriptional regulatory protein, C terminal
A9R16_000805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_000805	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_000805	PF11808	Phosphate regulon sensor protein PhoR
A9R16_000805	PF00989	PAS fold
A9R16_000820	PF07702	UTRA domain
A9R16_000820	PF00392	Bacterial regulatory proteins, gntR family
A9R16_000840	PF00005	ABC transporter
A9R16_000845	PF01895	PhoU domain
A9R16_000850	PF00490	Delta-aminolevulinic acid dehydratase
A9R16_000855	PF05191	Adenylate kinase, active site lid
A9R16_000865	PF00365	Phosphofructokinase
A9R16_000875	PF03030	Inorganic H+ pyrophosphatase
A9R16_000890	PF02366	Dolichyl-phosphate-mannose-protein mannosyltransferase  
A9R16_000895	PF00892	EamA-like transporter family
A9R16_000900	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
A9R16_000905	PF00535	Glycosyl transferase family 2
A9R16_000910	PF00551	Formyl transferase
A9R16_000910	PF02911	Formyl transferase, C-terminal domain
A9R16_000910	PF01370	NAD dependent epimerase/dehydratase family
A9R16_000915	PF01370	NAD dependent epimerase/dehydratase family
A9R16_000915	PF02911	Formyl transferase, C-terminal domain
A9R16_000915	PF00551	Formyl transferase
A9R16_000920	PF01522	Polysaccharide deacetylase
A9R16_000925	PF00270	DEAD/DEAH box helicase
A9R16_000925	PF04408	Helicase associated domain (HA2)
A9R16_000925	PF00271	Helicase conserved C-terminal domain
A9R16_000925	PF08482	ATP-dependent helicase C-terminal
A9R16_000930	PF04055	Radical SAM superfamily
A9R16_000930	PF06968	Biotin and Thiamin Synthesis associated domain
A9R16_000935	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
A9R16_000935	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
A9R16_000935	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
A9R16_000955	PF00483	Nucleotidyl transferase
A9R16_000960	PF01636	Phosphotransferase enzyme family
A9R16_000965	PF03968	OstA-like protein
A9R16_000965	PF04453	LPS transport system D
A9R16_000970	PF09312	SurA N-terminal domain
A9R16_000970	PF00639	PPIC-type PPIASE domain
A9R16_000975	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
A9R16_000980	PF00398	Ribosomal RNA adenine dimethylase
A9R16_000985	PF02677	Epoxyqueuosine reductase QueH
A9R16_001005	PF02092	Glycyl-tRNA synthetase beta subunit
A9R16_001005	PF05746	DALR anticodon binding domain
A9R16_001010	PF02091	Glycyl-tRNA synthetase alpha subunit
A9R16_001015	PF00912	Transglycosylase
A9R16_001030	PF16916	Dimerisation domain of Zinc Transporter
A9R16_001030	PF01545	Cation efflux family
A9R16_001035	PF03951	Glutamine synthetase, beta-Grasp domain
A9R16_001035	PF00120	Glutamine synthetase, catalytic domain
A9R16_001045	PF01385	Probable transposase
A9R16_001045	PF12323	Helix-turn-helix domain
A9R16_001045	PF07282	Putative transposase DNA-binding domain
A9R16_001050	PF10282	Lactonase, 7-bladed beta-propeller
A9R16_001055	PF13545	Crp-like helix-turn-helix domain
A9R16_001055	PF00027	Cyclic nucleotide-binding domain
A9R16_001105	PF02867	Ribonucleotide reductase, barrel domain
A9R16_001105	PF00317	Ribonucleotide reductase, all-alpha domain
A9R16_001105	PF03477	ATP cone domain
A9R16_001115	PF04055	Radical SAM superfamily
A9R16_001115	PF16199	Radical_SAM C-terminal domain
A9R16_001120	PF01136	Peptidase family U32
A9R16_001125	PF01136	Peptidase family U32
A9R16_001155	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
A9R16_001160	PF06969	HemN C-terminal domain
A9R16_001160	PF04055	Radical SAM superfamily
A9R16_001170	PF03060	Nitronate monooxygenase
A9R16_001180	PF03006	Haemolysin-III related
A9R16_001205	PF04055	Radical SAM superfamily
A9R16_001205	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
A9R16_001210	PF03099	Biotin/lipoate A/B protein ligase family
A9R16_001215	PF04359	Protein of unknown function (DUF493)
A9R16_001220	PF01063	Amino-transferase class IV
A9R16_001225	PF03330	Lytic transglycolase
A9R16_001225	PF05036	Sporulation related domain
A9R16_001230	PF01098	Cell cycle protein
A9R16_001235	PF03717	Penicillin-binding Protein dimerisation domain
A9R16_001235	PF00905	Penicillin binding protein transpeptidase domain
A9R16_001240	PF04093	rod shape-determining protein MreD
A9R16_001245	PF04085	rod shape-determining protein MreC
A9R16_001255	PF02686	Glu-tRNAGln amidotransferase C subunit
A9R16_001260	PF01425	Amidase
A9R16_001265	PF02934	GatB/GatE catalytic domain
A9R16_001265	PF02637	GatB domain
A9R16_001270	PF08241	Methyltransferase domain
A9R16_001280	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_001280	PF03466	LysR substrate binding domain
A9R16_001305	PF07728	AAA domain (dynein-related subfamily)
A9R16_001305	PF08406	CbbQ/NirQ/NorQ C-terminal 
A9R16_001310	PF01593	Flavin containing amine oxidoreductase
A9R16_001315	PF00890	FAD binding domain
A9R16_001315	PF04205	FMN-binding domain
A9R16_001325	PF02754	Cysteine-rich domain
A9R16_001330	PF01381	Helix-turn-helix
A9R16_001350	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
A9R16_001350	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
A9R16_001365	PF00730	HhH-GPD superfamily base excision DNA repair protein
A9R16_001365	PF07934	8-oxoguanine DNA glycosylase, N-terminal domain
A9R16_001370	PF01566	Natural resistance-associated macrophage protein
A9R16_001375	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_001375	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_001375	PF00989	PAS fold
A9R16_001380	PF02954	Bacterial regulatory protein, Fis family
A9R16_001380	PF00072	Response regulator receiver domain
A9R16_001380	PF00158	Sigma-54 interaction domain
A9R16_001395	PF00005	ABC transporter
A9R16_001400	PF02405	Permease MlaE
A9R16_001405	PF01494	FAD binding domain
A9R16_001410	PF01494	FAD binding domain
A9R16_001415	PF05195	Aminopeptidase P, N-terminal domain
A9R16_001415	PF00557	Metallopeptidase family M24
A9R16_001440	PF01812	5-formyltetrahydrofolate cyclo-ligase family
A9R16_001445	PF13277	YmdB-like protein
A9R16_001465	PF00291	Pyridoxal-phosphate dependent enzyme
A9R16_001465	PF00585	C-terminal regulatory domain of Threonine dehydratase
A9R16_001475	PF00563	EAL domain
A9R16_001475	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_001475	PF03707	Bacterial signalling protein N terminal repeat
A9R16_001485	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
A9R16_001490	PF08240	Alcohol dehydrogenase GroES-like domain
A9R16_001490	PF00107	Zinc-binding dehydrogenase
A9R16_001495	PF00085	Thioredoxin
A9R16_001500	PF00588	SpoU rRNA Methylase family
A9R16_001505	PF07963	Prokaryotic N-terminal methylation motif
A9R16_001505	PF08334	Type II secretion system (T2SS), protein G
A9R16_001530	PF00437	Type II/IV secretion system protein
A9R16_001530	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
A9R16_001535	PF00482	Type II secretion system (T2SS), protein F
A9R16_001560	PF03958	Bacterial type II/III secretion system short domain
A9R16_001560	PF00263	Bacterial type II and III secretion system protein
A9R16_001565	PF01471	Putative peptidoglycan binding domain
A9R16_001565	PF13401	AAA domain
A9R16_001580	PF00155	Aminotransferase class I and II
A9R16_001585	PF12697	Alpha/beta hydrolase family
A9R16_001590	PF08241	Methyltransferase domain
A9R16_001595	PF13302	Acetyltransferase (GNAT) domain
A9R16_001660	PF00132	Bacterial transferase hexapeptide (six repeats)
A9R16_001670	PF04545	Sigma-70, region 4
A9R16_001670	PF00140	Sigma-70 factor, region 1.2
A9R16_001670	PF04542	Sigma-70 region 2 
A9R16_001675	PF18075	FtsX extracellular domain
A9R16_001680	PF00005	ABC transporter
A9R16_001685	PF00448	SRP54-type protein, GTPase domain
A9R16_001685	PF02881	SRP54-type protein, helical bundle domain
A9R16_001690	PF00037	4Fe-4S binding domain
A9R16_001695	PF01467	Cytidylyltransferase-like
A9R16_001705	PF00654	Voltage gated chloride channel
A9R16_001715	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
A9R16_001715	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
A9R16_001715	PF06827	Zinc finger found in FPG and IleRS
A9R16_001735	PF00005	ABC transporter
A9R16_001740	PF00111	2Fe-2S iron-sulfur cluster binding domain
A9R16_001740	PF00175	Oxidoreductase NAD-binding domain 
A9R16_001740	PF00970	Oxidoreductase FAD-binding domain
A9R16_001745	PF01545	Cation efflux family
A9R16_001760	PF07219	HemY protein N-terminus
A9R16_001760	PF07719	Tetratricopeptide repeat
A9R16_001770	PF02602	Uroporphyrinogen-III synthase HemD
A9R16_001775	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
A9R16_001775	PF03900	Porphobilinogen deaminase, C-terminal domain
A9R16_001795	PF04378	Ribosomal RNA large subunit methyltransferase D, RlmJ
A9R16_001805	PF07690	Major Facilitator Superfamily
A9R16_001810	PF00581	Rhodanese-like domain
A9R16_001815	PF01925	Sulfite exporter TauE/SafE
A9R16_001825	PF14698	Argininosuccinate lyase C-terminal
A9R16_001825	PF00206	Lyase
A9R16_001830	PF07694	5TMR of 5TMR-LYT
A9R16_001830	PF06580	Histidine kinase
A9R16_001830	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_001835	PF04397	LytTr DNA-binding domain
A9R16_001835	PF00072	Response regulator receiver domain
A9R16_001845	PF00535	Glycosyl transferase family 2
A9R16_001850	PF00857	Isochorismatase family
A9R16_001860	PF02222	ATP-grasp domain
A9R16_001860	PF01370	NAD dependent epimerase/dehydratase family
A9R16_001875	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_001875	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
A9R16_001875	PF05362	Lon protease (S16) C-terminal proteolytic domain
A9R16_001885	PF01491	Frataxin-like domain
A9R16_001900	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
A9R16_001900	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
A9R16_001905	PF01678	Diaminopimelate epimerase
A9R16_001915	PF02899	Phage integrase, N-terminal SAM-like domain
A9R16_001915	PF00589	Phage integrase family
A9R16_001925	PF00227	Proteasome subunit
A9R16_001930	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_001930	PF07724	AAA domain (Cdc48 subfamily)
A9R16_001930	PF10431	C-terminal, D2-small domain, of ClpB protein 
A9R16_001935	PF00689	Cation transporting ATPase, C-terminus
A9R16_001935	PF00690	Cation transporter/ATPase, N-terminus
A9R16_001940	PF00478	IMP dehydrogenase / GMP reductase domain
A9R16_001940	PF00571	CBS domain
A9R16_001945	PF00011	Hsp20/alpha crystallin family
A9R16_001950	PF00696	Amino acid kinase family
A9R16_001960	PF00440	Bacterial regulatory proteins, tetR family
A9R16_001975	PF00899	ThiF family
A9R16_001980	PF13847	Methyltransferase domain
A9R16_001980	PF17827	PrmC N-terminal domain
A9R16_001985	PF00472	RF-1 domain
A9R16_001985	PF03462	PCRF domain
A9R16_001990	PF01488	Shikimate / quinate 5-dehydrogenase
A9R16_001990	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
A9R16_001990	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
A9R16_002005	PF03550	Outer membrane lipoprotein LolB
A9R16_002010	PF08544	GHMP kinases C terminal 
A9R16_002010	PF00288	GHMP kinases N terminal domain
A9R16_002020	PF14572	Phosphoribosyl synthetase-associated domain
A9R16_002020	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
A9R16_002025	PF01386	Ribosomal L25p family
A9R16_002025	PF14693	Ribosomal protein TL5, C-terminal domain
A9R16_002030	PF01195	Peptidyl-tRNA hydrolase
A9R16_002035	PF06071	Protein of unknown function (DUF933)
A9R16_002035	PF01926	50S ribosome-binding GTPase
A9R16_002060	PF03865	Haemolysin secretion/activation protein ShlB/FhaC/HecB
A9R16_002060	PF08479	POTRA domain, ShlB-type
A9R16_002080	PF14403	Circularly permuted ATP-grasp type 2 
A9R16_002080	PF04168	A predicted alpha-helical domain with a conserved ER motif.
A9R16_002085	PF14403	Circularly permuted ATP-grasp type 2 
A9R16_002125	PF02641	Uncharacterized ACR, COG1993
A9R16_002130	PF00361	Proton-conducting membrane transporter
A9R16_002135	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A9R16_002140	PF00374	Nickel-dependent hydrogenase
A9R16_002140	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A9R16_002140	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A9R16_002145	PF00361	Proton-conducting membrane transporter
A9R16_002145	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
A9R16_002155	PF00146	NADH dehydrogenase
A9R16_002160	PF00034	Cytochrome c
A9R16_002170	PF07885	Ion channel
A9R16_002170	PF02254	TrkA-N domain
A9R16_002225	PF03631	Virulence factor BrkB
A9R16_002230	PF02445	Quinolinate synthetase A protein
A9R16_002255	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
A9R16_002255	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
A9R16_002260	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A9R16_002260	PF01346	Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
A9R16_002265	PF00313	'Cold-shock' DNA-binding domain
A9R16_002275	PF02913	FAD linked oxidases, C-terminal domain
A9R16_002275	PF01565	FAD binding domain 
A9R16_002280	PF01565	FAD binding domain 
A9R16_002285	PF02754	Cysteine-rich domain
A9R16_002285	PF13183	4Fe-4S dicluster domain
A9R16_002300	PF04055	Radical SAM superfamily
A9R16_002300	PF01938	TRAM domain
A9R16_002300	PF00919	Uncharacterized protein family UPF0004
A9R16_002305	PF02562	PhoH-like protein
A9R16_002310	PF02130	Uncharacterized protein family UPF0054
A9R16_002315	PF03471	Transporter associated domain
A9R16_002315	PF00571	CBS domain
A9R16_002320	PF00795	Carbon-nitrogen hydrolase
A9R16_002325	PF01979	Amidohydrolase family
A9R16_002330	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
A9R16_002330	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
A9R16_002335	PF00156	Phosphoribosyl transferase domain
A9R16_002340	PF03652	Holliday junction resolvase
A9R16_002345	PF02622	Uncharacterized ACR, COG1678
A9R16_002355	PF02955	Prokaryotic glutathione synthetase, ATP-grasp domain
A9R16_002355	PF02951	Prokaryotic glutathione synthetase, N-terminal domain
A9R16_002365	PF00072	Response regulator receiver domain
A9R16_002370	PF00072	Response regulator receiver domain
A9R16_002375	PF01584	CheW-like domain
A9R16_002380	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
A9R16_002380	PF13675	Type IV pili methyl-accepting chemotaxis transducer N-term
A9R16_002385	PF00072	Response regulator receiver domain
A9R16_002385	PF01627	Hpt domain
A9R16_002385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_002385	PF02895	Signal transducing histidine kinase, homodimeric domain
A9R16_002385	PF00072	Response regulator receiver domain
A9R16_002385	PF01627	Hpt domain
A9R16_002385	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_002385	PF02895	Signal transducing histidine kinase, homodimeric domain
A9R16_002385	PF01584	CheW-like domain
A9R16_002385	PF01584	CheW-like domain
A9R16_002395	PF01584	CheW-like domain
A9R16_002410	PF00459	Inositol monophosphatase family
A9R16_002415	PF00485	Phosphoribulokinase / Uridine kinase family
A9R16_002420	PF00456	Transketolase, thiamine diphosphate binding domain
A9R16_002420	PF02779	Transketolase, pyrimidine binding domain
A9R16_002420	PF02780	Transketolase, C-terminal domain
A9R16_002425	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
A9R16_002425	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A9R16_002430	PF00162	Phosphoglycerate kinase
A9R16_002435	PF00224	Pyruvate kinase, barrel domain
A9R16_002435	PF02887	Pyruvate kinase, alpha/beta domain
A9R16_002440	PF01116	Fructose-bisphosphate aldolase class-II
A9R16_002455	PF00919	Uncharacterized protein family UPF0004
A9R16_002455	PF18693	TRAM domain
A9R16_002455	PF04055	Radical SAM superfamily
A9R16_002465	PF01618	MotA/TolQ/ExbB proton channel family
A9R16_002470	PF02472	Biopolymer transport protein ExbD/TolR
A9R16_002485	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
A9R16_002485	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
A9R16_002490	PF00834	Ribulose-phosphate 3 epimerase family
A9R16_002495	PF13419	Haloacid dehalogenase-like hydrolase
A9R16_002500	PF00425	chorismate binding enzyme
A9R16_002500	PF04715	Anthranilate synthase component I, N terminal region
A9R16_002505	PF00117	Glutamine amidotransferase class-I
A9R16_002510	PF02885	Glycosyl transferase family, helical bundle domain
A9R16_002510	PF00591	Glycosyl transferase family, a/b domain
A9R16_002515	PF00218	Indole-3-glycerol phosphate synthase
A9R16_002520	PF02566	OsmC-like protein
A9R16_002530	PF03232	Ubiquinone biosynthesis protein COQ7
A9R16_002535	PF13183	4Fe-4S dicluster domain
A9R16_002535	PF02754	Cysteine-rich domain
A9R16_002545	PF00572	Ribosomal protein L13
A9R16_002550	PF00380	Ribosomal protein S9/S16
A9R16_002565	PF00563	EAL domain
A9R16_002565	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_002565	PF03707	Bacterial signalling protein N terminal repeat
A9R16_002575	PF02774	Semialdehyde dehydrogenase, dimerisation domain
A9R16_002575	PF01118	Semialdehyde dehydrogenase, NAD binding domain
A9R16_002590	PF01521	Iron-sulphur cluster biosynthesis
A9R16_002595	PF03702	Anhydro-N-acetylmuramic acid kinase
A9R16_002600	PF01479	S4 domain
A9R16_002600	PF00579	tRNA synthetases class I (W and Y)
A9R16_002630	PF03099	Biotin/lipoate A/B protein ligase family
A9R16_002630	PF02237	Biotin protein ligase C terminal domain
A9R16_002635	PF03309	Type III pantothenate kinase
A9R16_002645	PF00330	Aconitase family (aconitate hydratase)
A9R16_002645	PF00694	Aconitase C-terminal domain
A9R16_002665	PF00009	Elongation factor Tu GTP binding domain
A9R16_002665	PF03144	Elongation factor Tu domain 2
A9R16_002665	PF03143	Elongation factor Tu C-terminal domain
A9R16_002675	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
A9R16_002680	PF00467	KOW motif
A9R16_002680	PF02357	Transcription termination factor nusG
A9R16_002685	PF00298	Ribosomal protein L11, RNA binding domain
A9R16_002685	PF03946	Ribosomal protein L11, N-terminal domain
A9R16_002690	PF00687	Ribosomal protein L1p/L10e family
A9R16_002695	PF00466	Ribosomal protein L10
A9R16_002700	PF00542	Ribosomal protein L7/L12 C-terminal domain
A9R16_002700	PF16320	Ribosomal protein L7/L12 dimerisation domain
A9R16_002705	PF10385	RNA polymerase beta subunit external 1 domain
A9R16_002705	PF04563	RNA polymerase beta subunit
A9R16_002705	PF04561	RNA polymerase Rpb2, domain 2
A9R16_002705	PF00562	RNA polymerase Rpb2, domain 6
A9R16_002705	PF04560	RNA polymerase Rpb2, domain 7
A9R16_002705	PF04565	RNA polymerase Rpb2, domain 3
A9R16_002710	PF04997	RNA polymerase Rpb1, domain 1
A9R16_002710	PF04998	RNA polymerase Rpb1, domain 5
A9R16_002710	PF05000	RNA polymerase Rpb1, domain 4
A9R16_002710	PF04983	RNA polymerase Rpb1, domain 3
A9R16_002710	PF00623	RNA polymerase Rpb1, domain 2
A9R16_002715	PF00164	Ribosomal protein S12/S23
A9R16_002720	PF00177	Ribosomal protein S7p/S5e
A9R16_002725	PF00009	Elongation factor Tu GTP binding domain
A9R16_002725	PF14492	Elongation Factor G, domain II
A9R16_002725	PF03144	Elongation factor Tu domain 2
A9R16_002725	PF03764	Elongation factor G, domain IV
A9R16_002725	PF00679	Elongation factor G C-terminus
A9R16_002730	PF03143	Elongation factor Tu C-terminal domain
A9R16_002730	PF03144	Elongation factor Tu domain 2
A9R16_002730	PF00009	Elongation factor Tu GTP binding domain
A9R16_002735	PF00338	Ribosomal protein S10p/S20e
A9R16_002740	PF00297	Ribosomal protein L3
A9R16_002745	PF00573	Ribosomal protein L4/L1 family
A9R16_002750	PF00276	Ribosomal protein L23
A9R16_002755	PF03947	Ribosomal Proteins L2, C-terminal domain
A9R16_002755	PF00181	Ribosomal Proteins L2, RNA binding domain
A9R16_002760	PF00203	Ribosomal protein S19
A9R16_002765	PF00237	Ribosomal protein L22p/L17e
A9R16_002770	PF00189	Ribosomal protein S3, C-terminal domain
A9R16_002770	PF07650	KH domain
A9R16_002775	PF00252	Ribosomal protein L16p/L10e
A9R16_002780	PF00831	Ribosomal L29 protein
A9R16_002785	PF00366	Ribosomal protein S17
A9R16_002790	PF00238	Ribosomal protein L14p/L23e
A9R16_002795	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
A9R16_002800	PF00281	Ribosomal protein L5
A9R16_002800	PF00673	ribosomal L5P family C-terminus
A9R16_002805	PF00253	Ribosomal protein S14p/S29e
A9R16_002810	PF00410	Ribosomal protein S8
A9R16_002815	PF00347	Ribosomal protein L6
A9R16_002820	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
A9R16_002825	PF00333	Ribosomal protein S5, N-terminal domain
A9R16_002825	PF03719	Ribosomal protein S5, C-terminal domain
A9R16_002830	PF00327	Ribosomal protein L30p/L7e
A9R16_002835	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
A9R16_002840	PF00344	SecY translocase
A9R16_002845	PF00444	Ribosomal protein L36
A9R16_002850	PF00416	Ribosomal protein S13/S18
A9R16_002855	PF00411	Ribosomal protein S11
A9R16_002860	PF00163	Ribosomal protein S4/S9 N-terminal domain
A9R16_002860	PF01479	S4 domain
A9R16_002865	PF01000	RNA polymerase Rpb3/RpoA insert domain
A9R16_002865	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
A9R16_002865	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
A9R16_002870	PF01196	Ribosomal protein L17
A9R16_002875	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
A9R16_002880	PF01467	Cytidylyltransferase-like
A9R16_002880	PF00294	pfkB family carbohydrate kinase
A9R16_002895	PF17755	UvrA DNA-binding domain
A9R16_002895	PF17760	UvrA interaction domain
A9R16_002900	PF00436	Single-strand binding protein family
A9R16_002925	PF00145	C-5 cytosine-specific DNA methylase
A9R16_002935	PF03852	DNA mismatch endonuclease Vsr
A9R16_002955	PF01119	DNA mismatch repair protein, C-terminal domain
A9R16_002955	PF08676	MutL C terminal dimerisation domain
A9R16_002960	PF04545	Sigma-70, region 4
A9R16_002960	PF04539	Sigma-70 region 3
A9R16_002960	PF00140	Sigma-70 factor, region 1.2
A9R16_002960	PF04542	Sigma-70 region 2 
A9R16_002985	PF02371	Transposase IS116/IS110/IS902 family
A9R16_002985	PF01548	Transposase
A9R16_003000	PF00127	Copper binding proteins, plastocyanin/azurin family
A9R16_003015	PF08502	LeuA allosteric (dimerisation) domain
A9R16_003015	PF00682	HMGL-like
A9R16_003035	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
A9R16_003035	PF02770	Acyl-CoA dehydrogenase, middle domain
A9R16_003035	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
A9R16_003040	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_003040	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_003040	PF08448	PAS fold
A9R16_003040	PF13188	PAS domain
A9R16_003040	PF00072	Response regulator receiver domain
A9R16_003050	PF02595	Glycerate kinase family
A9R16_003055	PF00437	Type II/IV secretion system protein
A9R16_003060	PF00571	CBS domain
A9R16_003060	PF00478	IMP dehydrogenase / GMP reductase domain
A9R16_003065	PF03881	Fructosamine kinase
A9R16_003090	PF02938	GAD domain
A9R16_003090	PF00152	tRNA synthetases class II (D, K and N) 
A9R16_003090	PF01336	OB-fold nucleic acid binding domain
A9R16_003105	PF01709	Transcriptional regulator
A9R16_003110	PF02075	Crossover junction endodeoxyribonuclease RuvC
A9R16_003115	PF07499	RuvA, C-terminal domain
A9R16_003115	PF01330	RuvA N terminal domain
A9R16_003120	PF17864	RuvB AAA lid domain
A9R16_003120	PF05491	RuvB C-terminal winged helix domain
A9R16_003120	PF05496	Holliday junction DNA helicase RuvB P-loop domain
A9R16_003125	PF03061	Thioesterase superfamily
A9R16_003130	PF01618	MotA/TolQ/ExbB proton channel family
A9R16_003135	PF02472	Biopolymer transport protein ExbD/TolR
A9R16_003145	PF07676	WD40-like Beta Propeller Repeat
A9R16_003145	PF04052	TolB amino-terminal domain
A9R16_003150	PF00691	OmpA family
A9R16_003160	PF04055	Radical SAM superfamily
A9R16_003165	PF06508	Queuosine biosynthesis protein QueC
A9R16_003175	PF00589	Phage integrase family
A9R16_003180	PF02463	RecF/RecN/SMC N terminal domain
A9R16_003200	PF10544	T5orf172 domain
A9R16_003255	PF02796	Helix-turn-helix domain of resolvase
A9R16_003255	PF00665	Integrase core domain
A9R16_003260	PF01695	IstB-like ATP binding protein
A9R16_003285	PF00403	Heavy-metal-associated domain
A9R16_003300	PF13411	MerR HTH family regulatory protein
A9R16_003345	PF05114	Protein of unknown function (DUF692)
A9R16_003380	PF13005	zinc-finger binding domain of transposase IS66 
A9R16_003380	PF13007	Transposase C of IS166 homeodomain
A9R16_003380	PF13817	IS66 C-terminal element
A9R16_003380	PF03050	Transposase IS66 family 
A9R16_003385	PF01695	IstB-like ATP binding protein
A9R16_003390	PF00665	Integrase core domain
A9R16_003430	PF12615	F sex factor protein N terminal
A9R16_003430	PF10412	Type IV secretion-system coupling protein DNA-binding domain
A9R16_003450	PF18272	single-stranded DNA binding TraI N-terminal subdomain
A9R16_003450	PF18272	single-stranded DNA binding TraI N-terminal subdomain
A9R16_003450	PF07057	DNA helicase TraI
A9R16_003450	PF18340	DNA relaxase TraI 2B/2B-like domain
A9R16_003450	PF08751	TrwC relaxase
A9R16_003450	PF18340	DNA relaxase TraI 2B/2B-like domain
A9R16_003450	PF07057	DNA helicase TraI
A9R16_003450	PF08751	TrwC relaxase
A9R16_003475	PF01751	Toprim domain
A9R16_003475	PF01131	DNA topoisomerase
A9R16_003495	PF18818	Metallopeptidase superfamily domain
A9R16_003495	PF08401	Domain of unknown function (DUF1738)
A9R16_003560	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
A9R16_003560	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A9R16_003575	PF00374	Nickel-dependent hydrogenase
A9R16_003580	PF01155	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
A9R16_003585	PF02492	CobW/HypB/UreG, nucleotide-binding domain
A9R16_003590	PF00708	Acylphosphatase
A9R16_003590	PF07503	HypF finger
A9R16_003590	PF01300	Telomere recombination
A9R16_003590	PF17788	HypF Kae1-like domain
A9R16_003595	PF01455	HupF/HypC family
A9R16_003600	PF01924	Hydrogenase formation hypA family
A9R16_003605	PF02769	AIR synthase related protein, C-terminal domain
A9R16_003605	PF00586	AIR synthase related protein, N-terminal domain
A9R16_003610	PF02911	Formyl transferase, C-terminal domain
A9R16_003610	PF00378	Enoyl-CoA hydratase/isomerase
A9R16_003610	PF00551	Formyl transferase
A9R16_003615	PF03824	High-affinity nickel-transport protein
A9R16_003620	PF09363	XFP C-terminal domain
A9R16_003620	PF09364	XFP N-terminal domain
A9R16_003620	PF03894	D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase
A9R16_003625	PF00871	Acetokinase family
A9R16_003630	PF07238	PilZ domain
A9R16_003630	PF00535	Glycosyl transferase family 2
A9R16_003645	PF01270	Glycosyl hydrolases family 8
A9R16_003650	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_003650	PF00360	Phytochrome region
A9R16_003650	PF01590	GAF domain
A9R16_003650	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_003650	PF08446	PAS fold
A9R16_003655	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_003655	PF00072	Response regulator receiver domain
A9R16_003660	PF00563	EAL domain
A9R16_003660	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_003660	PF03707	Bacterial signalling protein N terminal repeat
A9R16_003665	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_003665	PF03707	Bacterial signalling protein N terminal repeat
A9R16_003665	PF00563	EAL domain
A9R16_003670	PF07690	Major Facilitator Superfamily
A9R16_003675	PF08362	YcdC-like protein, C-terminal region
A9R16_003675	PF00440	Bacterial regulatory proteins, tetR family
A9R16_003700	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
A9R16_003705	PF01791	DeoC/LacD family aldolase
A9R16_003710	PF01048	Phosphorylase superfamily
A9R16_003740	PF01979	Amidohydrolase family
A9R16_003745	PF00857	Isochorismatase family
A9R16_003755	PF01315	Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
A9R16_003755	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
A9R16_003755	PF00111	2Fe-2S iron-sulfur cluster binding domain
A9R16_003755	PF01799	[2Fe-2S] binding domain
A9R16_003760	PF00111	2Fe-2S iron-sulfur cluster binding domain
A9R16_003760	PF01799	[2Fe-2S] binding domain
A9R16_003765	PF00941	FAD binding domain in molybdopterin dehydrogenase
A9R16_003765	PF03450	CO dehydrogenase flavoprotein C-terminal domain
A9R16_003775	PF09663	Amidohydrolase ring-opening protein (Amido_AtzD_TrzD)
A9R16_003780	PF02625	XdhC and CoxI family
A9R16_003780	PF13478	XdhC Rossmann domain
A9R16_003790	PF00392	Bacterial regulatory proteins, gntR family
A9R16_003790	PF07729	FCD domain
A9R16_003795	PF01618	MotA/TolQ/ExbB proton channel family
A9R16_003800	PF02472	Biopolymer transport protein ExbD/TolR
A9R16_003840	PF00149	Calcineurin-like phosphoesterase
A9R16_003845	PF00497	Bacterial extracellular solute-binding proteins, family 3
A9R16_003845	PF01627	Hpt domain
A9R16_003845	PF00072	Response regulator receiver domain
A9R16_003845	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_003845	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_003845	PF00989	PAS fold
A9R16_003860	PF03814	Potassium-transporting ATPase A subunit
A9R16_003870	PF02669	K+-transporting ATPase, c chain
A9R16_003880	PF03814	Potassium-transporting ATPase A subunit
A9R16_003890	PF02669	K+-transporting ATPase, c chain
A9R16_003895	PF02702	Osmosensitive K+ channel His kinase sensor domain
A9R16_003900	PF00672	HAMP domain
A9R16_003900	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_003900	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_003900	PF16767	Sensor domain of alginate biosynthesis sensor protein KinB
A9R16_003900	PF08448	PAS fold
A9R16_003905	PF02954	Bacterial regulatory protein, Fis family
A9R16_003905	PF00072	Response regulator receiver domain
A9R16_003905	PF00158	Sigma-54 interaction domain
A9R16_003915	PF02834	LigT like Phosphoesterase
A9R16_003920	PF01914	MarC family integral membrane protein
A9R16_003930	PF08447	PAS fold
A9R16_003930	PF08448	PAS fold
A9R16_003930	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_003930	PF00563	EAL domain
A9R16_003975	PF00581	Rhodanese-like domain
A9R16_003980	PF01206	Sulfurtransferase TusA
A9R16_003985	PF13686	DsrE/DsrF/DrsH-like family
A9R16_004015	PF02754	Cysteine-rich domain
A9R16_004020	PF01597	Glycine cleavage H-protein
A9R16_004030	PF01597	Glycine cleavage H-protein
A9R16_004040	PF10437	Bacterial lipoate protein ligase C-terminus
A9R16_004040	PF03099	Biotin/lipoate A/B protein ligase family
A9R16_004090	PF00850	Histone deacetylase domain
A9R16_004100	PF00437	Type II/IV secretion system protein
A9R16_004110	PF03466	LysR substrate binding domain
A9R16_004110	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_004125	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
A9R16_004130	PF00291	Pyridoxal-phosphate dependent enzyme
A9R16_004135	PF00290	Tryptophan synthase alpha chain
A9R16_004140	PF01039	Carboxyl transferase domain
A9R16_004140	PF17848	Acetyl-coA carboxylase zinc finger domain
A9R16_004145	PF02875	Mur ligase family, glutamate ligase domain
A9R16_004145	PF08245	Mur ligase middle domain
A9R16_004160	PF00156	Phosphoribosyl transferase domain
A9R16_004165	PF01053	Cys/Met metabolism PLP-dependent enzyme
A9R16_004175	PF00149	Calcineurin-like phosphoesterase
A9R16_004180	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
A9R16_004185	PF00749	tRNA synthetases class I (E and Q), catalytic domain
A9R16_004190	PF09190	DALR domain
A9R16_004190	PF01406	tRNA synthetases class I (C) catalytic domain
A9R16_004195	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A9R16_004195	PF00205	Thiamine pyrophosphate enzyme, central domain
A9R16_004195	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
A9R16_004200	PF10369	Small subunit of acetolactate synthase
A9R16_004205	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
A9R16_004205	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
A9R16_004210	PF02666	Phosphatidylserine decarboxylase
A9R16_004215	PF01066	CDP-alcohol phosphatidyltransferase
A9R16_004225	PF07690	Major Facilitator Superfamily
A9R16_004230	PF00682	HMGL-like
A9R16_004230	PF08502	LeuA allosteric (dimerisation) domain
A9R16_004240	PF01726	LexA DNA binding domain
A9R16_004240	PF00717	Peptidase S24-like
A9R16_004260	PF01541	GIY-YIG catalytic domain
A9R16_004265	PF04358	DsrC like protein
A9R16_004320	PF03167	Uracil DNA glycosylase superfamily
A9R16_004325	PF00583	Acetyltransferase (GNAT) family
A9R16_004330	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
A9R16_004335	PF02641	Uncharacterized ACR, COG1993
A9R16_004340	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
A9R16_004345	PF00133	tRNA synthetases class I (I, L, M and V)
A9R16_004345	PF10458	Valyl tRNA synthetase tRNA binding arm
A9R16_004345	PF08264	Anticodon-binding domain of tRNA
A9R16_004360	PF00883	Cytosol aminopeptidase family, catalytic domain
A9R16_004360	PF02789	Cytosol aminopeptidase family, N-terminal domain
A9R16_004365	PF03739	Lipopolysaccharide export system permease LptF/LptG
A9R16_004380	PF16327	Cytochrome c-type biogenesis protein CcmF C-terminal
A9R16_004380	PF01578	Cytochrome C assembly protein
A9R16_004385	PF03918	Cytochrome C biogenesis protein
A9R16_004395	PF00005	ABC transporter
A9R16_004400	PF03379	CcmB protein
A9R16_004405	PF01578	Cytochrome C assembly protein
A9R16_004415	PF03100	CcmE
A9R16_004420	PF08534	Redoxin
A9R16_004430	PF00376	MerR family regulatory protein
A9R16_004430	PF09278	MerR, DNA binding
A9R16_004440	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
A9R16_004450	PF02738	Molybdopterin-binding domain of aldehyde dehydrogenase
A9R16_004455	PF00111	2Fe-2S iron-sulfur cluster binding domain
A9R16_004455	PF01799	[2Fe-2S] binding domain
A9R16_004460	PF01641	SelR domain
A9R16_004465	PF01625	Peptide methionine sulfoxide reductase
A9R16_004480	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
A9R16_004480	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A9R16_004480	PF00205	Thiamine pyrophosphate enzyme, central domain
A9R16_004485	PF00962	Adenosine/AMP deaminase
A9R16_004490	PF17866	AAA lid domain
A9R16_004490	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_004495	PF00101	Ribulose bisphosphate carboxylase, small chain
A9R16_004500	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
A9R16_004500	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
A9R16_004505	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_004505	PF03466	LysR substrate binding domain
A9R16_004515	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_004520	PF02900	Catalytic LigB subunit of aromatic ring-opening dioxygenase
A9R16_004525	PF00005	ABC transporter
A9R16_004530	PF01061	ABC-2 type transporter
A9R16_004535	PF01553	Acyltransferase
A9R16_004540	PF06150	ChaB
A9R16_004560	PF08240	Alcohol dehydrogenase GroES-like domain
A9R16_004560	PF00107	Zinc-binding dehydrogenase
A9R16_004565	PF00756	Putative esterase
A9R16_004570	PF01979	Amidohydrolase family
A9R16_004580	PF08447	PAS fold
A9R16_004580	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_004580	PF08448	PAS fold
A9R16_004580	PF00563	EAL domain
A9R16_004600	PF00083	Sugar (and other) transporter
A9R16_004610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_004610	PF08447	PAS fold
A9R16_004610	PF08448	PAS fold
A9R16_004615	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
A9R16_004615	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A9R16_004620	PF00374	Nickel-dependent hydrogenase
A9R16_004625	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A9R16_004625	PF14720	NiFe/NiFeSe hydrogenase small subunit C-terminal
A9R16_004630	PF00374	Nickel-dependent hydrogenase
A9R16_004635	PF01292	Prokaryotic cytochrome b561
A9R16_004640	PF01750	Hydrogenase maturation protease
A9R16_004645	PF01455	HupF/HypC family
A9R16_004650	PF04809	HupH hydrogenase expression protein, C-terminal conserved region
A9R16_004660	PF00374	Nickel-dependent hydrogenase
A9R16_004665	PF01155	Hydrogenase/urease nickel incorporation, metallochaperone, hypA
A9R16_004670	PF02492	CobW/HypB/UreG, nucleotide-binding domain
A9R16_004675	PF07503	HypF finger
A9R16_004675	PF01300	Telomere recombination
A9R16_004675	PF00708	Acylphosphatase
A9R16_004675	PF17788	HypF Kae1-like domain
A9R16_004680	PF01455	HupF/HypC family
A9R16_004685	PF01924	Hydrogenase formation hypA family
A9R16_004690	PF00586	AIR synthase related protein, N-terminal domain
A9R16_004690	PF02769	AIR synthase related protein, C-terminal domain
A9R16_004695	PF02954	Bacterial regulatory protein, Fis family
A9R16_004695	PF00072	Response regulator receiver domain
A9R16_004695	PF00158	Sigma-54 interaction domain
A9R16_004700	PF03824	High-affinity nickel-transport protein
A9R16_004705	PF03989	DNA gyrase C-terminal domain, beta-propeller
A9R16_004705	PF00521	DNA gyrase/topoisomerase IV, subunit A
A9R16_004710	PF00266	Aminotransferase class-V
A9R16_004715	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
A9R16_004715	PF01842	ACT domain
A9R16_004715	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
A9R16_004720	PF01842	ACT domain
A9R16_004720	PF00800	Prephenate dehydratase
A9R16_004720	PF01817	Chorismate mutase type II
A9R16_004725	PF00155	Aminotransferase class I and II
A9R16_004730	PF02153	Prephenate dehydrogenase
A9R16_004730	PF01842	ACT domain
A9R16_004735	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
A9R16_004740	PF02224	Cytidylate kinase
A9R16_004745	PF00575	S1 RNA binding domain
A9R16_004750	PF00216	Bacterial DNA-binding protein
A9R16_004760	PF18073	Rubredoxin metal binding domain
A9R16_004765	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
A9R16_004770	PF00294	pfkB family carbohydrate kinase
A9R16_004770	PF01467	Cytidylyltransferase-like
A9R16_004775	PF01370	NAD dependent epimerase/dehydratase family
A9R16_004780	PF01050	Mannose-6-phosphate isomerase
A9R16_004780	PF00483	Nucleotidyl transferase
A9R16_004785	PF00664	ABC transporter transmembrane region
A9R16_004785	PF00005	ABC transporter
A9R16_004790	PF01370	NAD dependent epimerase/dehydratase family
A9R16_004800	PF00953	Glycosyl transferase family 4
A9R16_004805	PF02719	Polysaccharide biosynthesis protein
A9R16_004815	PF07728	AAA domain (dynein-related subfamily)
A9R16_004815	PF08406	CbbQ/NirQ/NorQ C-terminal 
A9R16_004820	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
A9R16_004820	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
A9R16_004825	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_004825	PF03466	LysR substrate binding domain
A9R16_004835	PF00106	short chain dehydrogenase
A9R16_004845	PF00483	Nucleotidyl transferase
A9R16_004855	PF00156	Phosphoribosyl transferase domain
A9R16_004860	PF01048	Phosphorylase superfamily
A9R16_004870	PF01327	Polypeptide deformylase
A9R16_004875	PF01385	Probable transposase
A9R16_004875	PF07282	Putative transposase DNA-binding domain
A9R16_004875	PF12323	Helix-turn-helix domain
A9R16_004890	PF02559	CarD-like/TRCF domain
A9R16_004890	PF00270	DEAD/DEAH box helicase
A9R16_004890	PF00271	Helicase conserved C-terminal domain
A9R16_004890	PF03461	TRCF domain
A9R16_004890	PF17757	UvrB interaction domain
A9R16_004900	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
A9R16_004905	PF02542	YgbB family
A9R16_004910	PF01713	Smr domain
A9R16_004910	PF00488	MutS domain V
A9R16_004915	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_004920	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
A9R16_004920	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
A9R16_004925	PF01580	FtsK/SpoIIIE family
A9R16_004925	PF09397	Ftsk gamma domain
A9R16_004925	PF17854	FtsK alpha domain
A9R16_004925	PF13491	4TM region of DNA translocase FtsK/SpoIIIE
A9R16_004930	PF03548	Outer membrane lipoprotein carrier protein LolA
A9R16_004935	PF12002	MgsA AAA+ ATPase C terminal
A9R16_004935	PF16193	AAA C-terminal domain
A9R16_004935	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_004945	PF02397	Bacterial sugar transferase
A9R16_004970	PF13401	AAA domain
A9R16_004970	PF01471	Putative peptidoglycan binding domain
A9R16_004975	PF13537	Glutamine amidotransferase domain
A9R16_004975	PF00733	Asparagine synthase
A9R16_004980	PF00501	AMP-binding enzyme
A9R16_004980	PF13193	AMP-binding enzyme C-terminal domain
A9R16_004985	PF00550	Phosphopantetheine attachment site
A9R16_004990	PF02540	NAD synthase
A9R16_004995	PF12804	MobA-like NTP transferase domain
A9R16_004995	PF00132	Bacterial transferase hexapeptide (six repeats)
A9R16_004995	PF14602	Hexapeptide repeat of succinyl-transferase
A9R16_005010	PF14602	Hexapeptide repeat of succinyl-transferase
A9R16_005010	PF12464	Maltose acetyltransferase 
A9R16_005015	PF13439	Glycosyltransferase Family 4
A9R16_005015	PF00534	Glycosyl transferases group 1
A9R16_005030	PF13439	Glycosyltransferase Family 4
A9R16_005030	PF00534	Glycosyl transferases group 1
A9R16_005045	PF16363	GDP-mannose 4,6 dehydratase
A9R16_005050	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
A9R16_005050	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
A9R16_005050	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
A9R16_005055	PF01370	NAD dependent epimerase/dehydratase family
A9R16_005060	PF00085	Thioredoxin
A9R16_005070	PF12627	Probable RNA and SrmB- binding site of polymerase A
A9R16_005070	PF01743	Poly A polymerase head domain
A9R16_005070	PF12626	Polymerase A arginine-rich C-terminus
A9R16_005075	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
A9R16_005085	PF02548	Ketopantoate hydroxymethyltransferase
A9R16_005090	PF02569	Pantoate-beta-alanine ligase
A9R16_005095	PF02261	Aspartate decarboxylase
A9R16_005100	PF07690	Major Facilitator Superfamily
A9R16_005110	PF00589	Phage integrase family
A9R16_005125	PF02547	Queuosine biosynthesis protein
A9R16_005130	PF13188	PAS domain
A9R16_005130	PF08448	PAS fold
A9R16_005130	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_005130	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_005130	PF00072	Response regulator receiver domain
A9R16_005135	PF01702	Queuine tRNA-ribosyltransferase
A9R16_005140	PF02699	Preprotein translocase subunit
A9R16_005145	PF13721	SecD export protein N-terminal TM region
A9R16_005145	PF02355	Protein export membrane protein
A9R16_005145	PF07549	SecD/SecF GG Motif
A9R16_005150	PF07549	SecD/SecF GG Motif
A9R16_005150	PF02355	Protein export membrane protein
A9R16_005160	PF01814	Hemerythrin HHE cation binding domain
A9R16_005165	PF00464	Serine hydroxymethyltransferase
A9R16_005170	PF03477	ATP cone domain
A9R16_005175	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
A9R16_005175	PF01872	RibD C-terminal domain
A9R16_005180	PF00677	Lumazine binding domain
A9R16_005190	PF00069	Protein kinase domain
A9R16_005190	PF03793	PASTA domain
A9R16_005195	PF00925	GTP cyclohydrolase II
A9R16_005195	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
A9R16_005200	PF00885	6,7-dimethyl-8-ribityllumazine synthase
A9R16_005205	PF01029	NusB family
A9R16_005210	PF00586	AIR synthase related protein, N-terminal domain
A9R16_005210	PF02769	AIR synthase related protein, C-terminal domain
A9R16_005220	PF02464	Competence-damaged protein
A9R16_005225	PF00154	recA bacterial DNA recombination protein
A9R16_005230	PF02631	RecX family
A9R16_005235	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A9R16_005235	PF01411	tRNA synthetases class II (A)
A9R16_005235	PF02272	DHHA1 domain
A9R16_005240	PF13840	ACT domain 
A9R16_005240	PF00696	Amino acid kinase family
A9R16_005240	PF01842	ACT domain
A9R16_005245	PF02599	Global regulator protein family
A9R16_005300	PF01610	Transposase
A9R16_005300	PF13542	Helix-turn-helix domain of transposase family ISL3
A9R16_005300	PF14690	zinc-finger of transposase IS204/IS1001/IS1096/IS1165
A9R16_005315	PF02634	FdhD/NarQ family
A9R16_005325	PF00384	Molybdopterin oxidoreductase
A9R16_005325	PF01568	Molydopterin dinucleotide binding domain
A9R16_005335	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
A9R16_005350	PF01381	Helix-turn-helix
A9R16_005470	PF00005	ABC transporter
A9R16_005470	PF06472	ABC transporter transmembrane region 2
A9R16_005485	PF00248	Aldo/keto reductase family
A9R16_005490	PF04321	RmlD substrate binding domain
A9R16_005495	PF00814	Glycoprotease family
A9R16_005500	PF00488	MutS domain V
A9R16_005500	PF01713	Smr domain
A9R16_005505	PF03471	Transporter associated domain
A9R16_005505	PF00571	CBS domain
A9R16_005505	PF01595	Cyclin M transmembrane N-terminal domain
A9R16_005515	PF01578	Cytochrome C assembly protein
A9R16_005520	PF00448	SRP54-type protein, GTPase domain
A9R16_005520	PF02978	Signal peptide binding domain
A9R16_005520	PF02881	SRP54-type protein, helical bundle domain
A9R16_005525	PF04353	Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ
A9R16_005530	PF11953	Domain of unknown function (DUF3470)
A9R16_005530	PF00037	4Fe-4S binding domain
A9R16_005540	PF00459	Inositol monophosphatase family
A9R16_005545	PF00588	SpoU rRNA Methylase family
A9R16_005550	PF00132	Bacterial transferase hexapeptide (six repeats)
A9R16_005555	PF02082	Transcriptional regulator
A9R16_005560	PF00266	Aminotransferase class-V
A9R16_005565	PF01592	NifU-like N terminal domain
A9R16_005570	PF01521	Iron-sulphur cluster biosynthesis
A9R16_005575	PF07743	HSCB C-terminal oligomerisation domain
A9R16_005580	PF00012	Hsp70 protein
A9R16_005585	PF00111	2Fe-2S iron-sulfur cluster binding domain
A9R16_005590	PF04384	Iron-sulphur cluster assembly
A9R16_005595	PF00334	Nucleoside diphosphate kinase
A9R16_005600	PF04055	Radical SAM superfamily
A9R16_005615	PF04551	GcpE protein
A9R16_005620	PF13393	Histidyl-tRNA synthetase
A9R16_005620	PF03129	Anticodon binding domain
A9R16_005635	PF01926	50S ribosome-binding GTPase
A9R16_005635	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
A9R16_005640	PF13742	OB-fold nucleic acid binding domain
A9R16_005640	PF02601	Exonuclease VII, large subunit
A9R16_005650	PF00478	IMP dehydrogenase / GMP reductase domain
A9R16_005650	PF00571	CBS domain
A9R16_005655	PF00117	Glutamine amidotransferase class-I
A9R16_005655	PF02540	NAD synthase
A9R16_005655	PF00958	GMP synthase C terminal domain
A9R16_005660	PF03050	Transposase IS66 family 
A9R16_005660	PF13817	IS66 C-terminal element
A9R16_005660	PF13007	Transposase C of IS166 homeodomain
A9R16_005660	PF13005	zinc-finger binding domain of transposase IS66 
A9R16_005715	PF01043	SecA preprotein cross-linking domain
A9R16_005715	PF07516	SecA Wing and Scaffold domain
A9R16_005715	PF02810	SEC-C motif
A9R16_005715	PF07517	SecA DEAD-like domain
A9R16_005725	PF00034	Cytochrome c
A9R16_005735	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
A9R16_005740	PF00115	Cytochrome C and Quinol oxidase polypeptide I
A9R16_005755	PF01040	UbiA prenyltransferase family
A9R16_005765	PF00127	Copper binding proteins, plastocyanin/azurin family
A9R16_005780	PF07690	Major Facilitator Superfamily
A9R16_005795	PF14437	MafB19-like deaminase
A9R16_005800	PF00497	Bacterial extracellular solute-binding proteins, family 3
A9R16_005800	PF01464	Transglycosylase SLT domain
A9R16_005810	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_005810	PF07689	KaiB domain
A9R16_005810	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_005815	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_005815	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_005820	PF00563	EAL domain
A9R16_005820	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_005820	PF13185	GAF domain
A9R16_005825	PF00072	Response regulator receiver domain
A9R16_005825	PF00196	Bacterial regulatory proteins, luxR family
A9R16_005845	PF05532	CsbD-like
A9R16_005865	PF07885	Ion channel
A9R16_005865	PF17655	Inward rectifier potassium channel C-terminal domain
A9R16_005875	PF12170	DNA polymerase III tau subunit V interacting with alpha
A9R16_005875	PF12169	DNA polymerase III subunits gamma and tau domain III
A9R16_005875	PF12168	DNA polymerase III subunits tau domain IV DnaB-binding
A9R16_005880	PF02575	YbaB/EbfC DNA-binding family
A9R16_005885	PF13662	Toprim domain
A9R16_005885	PF02132	RecR protein
A9R16_005890	PF01329	Pterin 4 alpha carbinolamine dehydratase
A9R16_005895	PF00929	Exonuclease
A9R16_005900	PF01256	Carbohydrate kinase
A9R16_005900	PF03853	YjeF-related protein N-terminus
A9R16_005905	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
A9R16_005910	PF11741	AMIN domain
A9R16_005910	PF01520	N-acetylmuramoyl-L-alanine amidase
A9R16_005915	PF13520	Amino acid permease
A9R16_005920	PF07282	Putative transposase DNA-binding domain
A9R16_005920	PF12323	Helix-turn-helix domain
A9R16_005920	PF01385	Probable transposase
A9R16_005930	PF01966	HD domain
A9R16_005930	PF01909	Nucleotidyltransferase domain
A9R16_005930	PF01842	ACT domain
A9R16_005930	PF08335	GlnD PII-uridylyltransferase
A9R16_005935	PF00557	Metallopeptidase family M24
A9R16_005940	PF00318	Ribosomal protein S2
A9R16_005945	PF00889	Elongation factor TS
A9R16_005950	PF00696	Amino acid kinase family
A9R16_005955	PF01765	Ribosome recycling factor
A9R16_005960	PF01255	Putative undecaprenyl diphosphate synthase
A9R16_005970	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
A9R16_005970	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
A9R16_005970	PF13288	DXP reductoisomerase C-terminal domain
A9R16_005975	PF13180	PDZ domain
A9R16_005975	PF17820	PDZ domain
A9R16_005975	PF02163	Peptidase family M50
A9R16_005980	PF07244	Surface antigen variable number repeat
A9R16_005980	PF01103	Surface antigen
A9R16_005985	PF00132	Bacterial transferase hexapeptide (six repeats)
A9R16_005985	PF04613	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD  
A9R16_005990	PF07977	FabA-like domain
A9R16_005995	PF00132	Bacterial transferase hexapeptide (six repeats)
A9R16_005995	PF13720	Udp N-acetylglucosamine O-acyltransferase; Domain 2
A9R16_006000	PF02684	Lipid-A-disaccharide synthetase
A9R16_006005	PF01351	Ribonuclease HII
A9R16_006010	PF01336	OB-fold nucleic acid binding domain
A9R16_006010	PF02811	PHP domain
A9R16_006010	PF14579	Helix-hairpin-helix motif
A9R16_006010	PF07733	Bacterial DNA polymerase III alpha NTPase domain
A9R16_006010	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
A9R16_006015	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
A9R16_006020	PF11734	TilS substrate C-terminal domain
A9R16_006020	PF09179	TilS substrate binding domain
A9R16_006020	PF01171	PP-loop family
A9R16_006025	PF06418	CTP synthase N-terminus
A9R16_006025	PF00117	Glutamine amidotransferase class-I
A9R16_006030	PF00793	DAHP synthetase I family
A9R16_006035	PF00113	Enolase, C-terminal TIM barrel domain
A9R16_006035	PF03952	Enolase, N-terminal domain
A9R16_006040	PF04977	Septum formation initiator
A9R16_006045	PF01571	Aminomethyltransferase folate-binding domain
A9R16_006050	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
A9R16_006060	PF00890	FAD binding domain
A9R16_006060	PF02910	Fumarate reductase flavoprotein C-term
A9R16_006065	PF13085	2Fe-2S iron-sulfur cluster binding domain
A9R16_006070	PF03937	Flavinator of succinate dehydrogenase
A9R16_006080	PF02403	Seryl-tRNA synthetase N-terminal domain
A9R16_006080	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A9R16_006095	PF07690	Major Facilitator Superfamily
A9R16_006135	PF00551	Formyl transferase
A9R16_006140	PF07690	Major Facilitator Superfamily
A9R16_006145	PF02541	Ppx/GppA phosphatase family
A9R16_006160	PF00107	Zinc-binding dehydrogenase
A9R16_006160	PF13823	Alcohol dehydrogenase GroES-associated
A9R16_006160	PF08240	Alcohol dehydrogenase GroES-like domain
A9R16_006165	PF07929	Plasmid pRiA4b ORF-3-like protein
A9R16_006195	PF00270	DEAD/DEAH box helicase
A9R16_006195	PF13749	Putative ATP-dependent DNA helicase recG C-terminal
A9R16_006195	PF17191	RecG wedge domain
A9R16_006215	PF03793	PASTA domain
A9R16_006215	PF00069	Protein kinase domain
A9R16_006225	PF01645	Conserved region in glutamate synthase
A9R16_006240	PF00120	Glutamine synthetase, catalytic domain
A9R16_006250	PF17806	Sarcosine oxidase A3 domain
A9R16_006250	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_006250	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A9R16_006250	PF01571	Aminomethyltransferase folate-binding domain
A9R16_006260	PF01266	FAD dependent oxidoreductase
A9R16_006275	PF00005	ABC transporter
A9R16_006305	PF16363	GDP-mannose 4,6 dehydratase
A9R16_006310	PF00483	Nucleotidyl transferase
A9R16_006315	PF00908	dTDP-4-dehydrorhamnose 3,5-epimerase
A9R16_006340	PF00535	Glycosyl transferase family 2
A9R16_006355	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
A9R16_006355	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
A9R16_006360	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
A9R16_006360	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
A9R16_006365	PF02635	DsrE/DsrF-like family
A9R16_006370	PF02635	DsrE/DsrF-like family
A9R16_006380	PF04358	DsrC like protein
A9R16_006395	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_006395	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A9R16_006405	PF13247	4Fe-4S dicluster domain
A9R16_006415	PF07685	CobB/CobQ-like glutamine amidotransferase domain
A9R16_006415	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
A9R16_006420	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A9R16_006420	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_006430	PF00072	Response regulator receiver domain
A9R16_006430	PF00196	Bacterial regulatory proteins, luxR family
A9R16_006440	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
A9R16_006440	PF14824	Sirohaem biosynthesis protein central
A9R16_006440	PF10414	Sirohaem synthase dimerisation region
A9R16_006450	PF05656	Protein of unknown function (DUF805)
A9R16_006455	PF08448	PAS fold
A9R16_006455	PF00072	Response regulator receiver domain
A9R16_006455	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_006455	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_006455	PF13188	PAS domain
A9R16_006460	PF04349	Periplasmic glucan biosynthesis protein, MdoG
A9R16_006465	PF04349	Periplasmic glucan biosynthesis protein, MdoG
A9R16_006480	PF00589	Phage integrase family
A9R16_006480	PF02899	Phage integrase, N-terminal SAM-like domain
A9R16_006510	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_006510	PF00072	Response regulator receiver domain
A9R16_006510	PF13188	PAS domain
A9R16_006510	PF08448	PAS fold
A9R16_006510	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_006515	PF01844	HNH endonuclease
A9R16_006520	PF00313	'Cold-shock' DNA-binding domain
A9R16_006530	PF00535	Glycosyl transferase family 2
A9R16_006535	PF04349	Periplasmic glucan biosynthesis protein, MdoG
A9R16_006555	PF00270	DEAD/DEAH box helicase
A9R16_006555	PF00271	Helicase conserved C-terminal domain
A9R16_006560	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_006575	PF02673	Bacitracin resistance protein BacA
A9R16_006580	PF02910	Fumarate reductase flavoprotein C-term
A9R16_006580	PF00890	FAD binding domain
A9R16_006585	PF04542	Sigma-70 region 2 
A9R16_006585	PF08281	Sigma-70, region 4
A9R16_006600	PF13180	PDZ domain
A9R16_006600	PF17820	PDZ domain
A9R16_006605	PF00679	Elongation factor G C-terminus
A9R16_006605	PF00009	Elongation factor Tu GTP binding domain
A9R16_006605	PF03144	Elongation factor Tu domain 2
A9R16_006605	PF06421	GTP-binding protein LepA C-terminus
A9R16_006610	PF10502	Signal peptidase, peptidase S26 
A9R16_006620	PF14622	Ribonuclease-III-like
A9R16_006620	PF00035	Double-stranded RNA binding motif
A9R16_006625	PF07650	KH domain
A9R16_006625	PF01926	50S ribosome-binding GTPase
A9R16_006630	PF02565	Recombination protein O C terminal
A9R16_006630	PF11967	Recombination protein O N terminal
A9R16_006635	PF03740	Pyridoxal phosphate biosynthesis protein PdxJ
A9R16_006640	PF01648	4'-phosphopantetheinyl transferase superfamily
A9R16_006645	PF04362	Bacterial Fe(2+) trafficking
A9R16_006650	PF01521	Iron-sulphur cluster biosynthesis
A9R16_006655	PF01820	D-ala D-ala ligase N-terminus
A9R16_006655	PF07478	D-ala D-ala ligase C-terminus
A9R16_006680	PF14490	Helix-hairpin-helix containing domain
A9R16_006680	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
A9R16_006680	PF13538	UvrD-like helicase C-terminal domain
A9R16_006705	PF04542	Sigma-70 region 2 
A9R16_006705	PF08281	Sigma-70, region 4
A9R16_006710	PF00128	Alpha amylase, catalytic domain
A9R16_006710	PF02806	Alpha amylase, C-terminal all-beta domain
A9R16_006710	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
A9R16_006720	PF00005	ABC transporter
A9R16_006720	PF16326	ABC transporter C-terminal domain
A9R16_006720	PF12848	ABC transporter
A9R16_006725	PF00043	Glutathione S-transferase, C-terminal domain
A9R16_006725	PF02798	Glutathione S-transferase, N-terminal domain
A9R16_006740	PF00528	Binding-protein-dependent transport system inner membrane component
A9R16_006745	PF00005	ABC transporter
A9R16_006765	PF00999	Sodium/hydrogen exchanger family
A9R16_006770	PF09137	Glucodextranase, domain N
A9R16_006770	PF00723	Glycosyl hydrolases family 15
A9R16_006785	PF00589	Phage integrase family
A9R16_006855	PF12615	F sex factor protein N terminal
A9R16_006855	PF10412	Type IV secretion-system coupling protein DNA-binding domain
A9R16_006905	PF01751	Toprim domain
A9R16_006905	PF01131	DNA topoisomerase
A9R16_006920	PF18818	Metallopeptidase superfamily domain
A9R16_006920	PF13362	Toprim domain
A9R16_006920	PF08401	Domain of unknown function (DUF1738)
A9R16_006940	PF00589	Phage integrase family
A9R16_006980	PF03814	Potassium-transporting ATPase A subunit
A9R16_007010	PF00664	ABC transporter transmembrane region
A9R16_007010	PF00005	ABC transporter
A9R16_007010	PF03412	Peptidase C39 family
A9R16_007035	PF00665	Integrase core domain
A9R16_007040	PF01695	IstB-like ATP binding protein
A9R16_007065	PF00749	tRNA synthetases class I (E and Q), catalytic domain
A9R16_007075	PF13361	UvrD-like helicase C-terminal domain
A9R16_007075	PF12705	PD-(D/E)XK nuclease superfamily
A9R16_007075	PF00580	UvrD/REP helicase N-terminal domain
A9R16_007095	PF13231	Dolichyl-phosphate-mannose-protein mannosyltransferase
A9R16_007105	PF03358	NADPH-dependent FMN reductase
A9R16_007110	PF01638	HxlR-like helix-turn-helix
A9R16_007115	PF02646	RmuC family
A9R16_007120	PF12848	ABC transporter
A9R16_007120	PF00005	ABC transporter
A9R16_007125	PF01522	Polysaccharide deacetylase
A9R16_007140	PF00550	Phosphopantetheine attachment site
A9R16_007160	PF00109	Beta-ketoacyl synthase, N-terminal domain
A9R16_007160	PF02801	Beta-ketoacyl synthase, C-terminal domain
A9R16_007175	PF00107	Zinc-binding dehydrogenase
A9R16_007175	PF08240	Alcohol dehydrogenase GroES-like domain
A9R16_007180	PF03472	Autoinducer binding domain
A9R16_007180	PF00196	Bacterial regulatory proteins, luxR family
A9R16_007205	PF00970	Oxidoreductase FAD-binding domain
A9R16_007205	PF00111	2Fe-2S iron-sulfur cluster binding domain
A9R16_007205	PF00175	Oxidoreductase NAD-binding domain 
A9R16_007210	PF01152	Bacterial-like globin
A9R16_007215	PF02082	Transcriptional regulator
A9R16_007245	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_007260	PF00723	Glycosyl hydrolases family 15
A9R16_007260	PF09137	Glucodextranase, domain N
A9R16_007265	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_007265	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A9R16_007270	PF00391	PEP-utilising enzyme, mobile domain
A9R16_007270	PF02896	PEP-utilising enzyme, TIM barrel domain
A9R16_007270	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
A9R16_007275	PF01515	Phosphate acetyl/butaryl transferase
A9R16_007295	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A9R16_007295	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A9R16_007295	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_007300	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A9R16_007305	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
A9R16_007305	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
A9R16_007310	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
A9R16_007330	PF00005	ABC transporter
A9R16_007340	PF02661	Fic/DOC family
A9R16_007345	PF00011	Hsp20/alpha crystallin family
A9R16_007360	PF02627	Carboxymuconolactone decarboxylase family
A9R16_007370	PF02525	Flavodoxin-like fold
A9R16_007385	PF13181	Tetratricopeptide repeat
A9R16_007395	PF04185	Phosphoesterase family
A9R16_007405	PF00328	Histidine phosphatase superfamily (branch 2)
A9R16_007540	PF03693	Bacterial antitoxin of ParD toxin-antitoxin type II system and RHH
A9R16_007550	PF12323	Helix-turn-helix domain
A9R16_007550	PF07282	Putative transposase DNA-binding domain
A9R16_007550	PF01385	Probable transposase
A9R16_007555	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_007555	PF05362	Lon protease (S16) C-terminal proteolytic domain
A9R16_007555	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
A9R16_007560	PF00149	Calcineurin-like phosphoesterase
A9R16_007590	PF02371	Transposase IS116/IS110/IS902 family
A9R16_007590	PF01548	Transposase
A9R16_007605	PF02604	Antitoxin Phd_YefM, type II toxin-antitoxin system
A9R16_007615	PF01548	Transposase
A9R16_007615	PF02371	Transposase IS116/IS110/IS902 family
A9R16_007635	PF00664	ABC transporter transmembrane region
A9R16_007635	PF00005	ABC transporter
A9R16_007635	PF03412	Peptidase C39 family
A9R16_007670	PF13533	Biotin-lipoyl like
A9R16_007675	PF02321	Outer membrane efflux protein
A9R16_007685	PF00534	Glycosyl transferases group 1
A9R16_007695	PF00270	DEAD/DEAH box helicase
A9R16_007695	PF01131	DNA topoisomerase
A9R16_007695	PF01751	Toprim domain
A9R16_007695	PF17915	Reverse gyrase zinc finger
A9R16_007700	PF03030	Inorganic H+ pyrophosphatase
A9R16_007705	PF01925	Sulfite exporter TauE/SafE
A9R16_007715	PF13545	Crp-like helix-turn-helix domain
A9R16_007715	PF00027	Cyclic nucleotide-binding domain
A9R16_007720	PF00437	Type II/IV secretion system protein
A9R16_007745	PF00437	Type II/IV secretion system protein
A9R16_007760	PF07655	Secretin N-terminal domain
A9R16_007760	PF00263	Bacterial type II and III secretion system protein
A9R16_007780	PF00437	Type II/IV secretion system protein
A9R16_007805	PF01381	Helix-turn-helix
A9R16_007835	PF01555	DNA methylase
A9R16_007835	PF18273	Type III R-M EcoP15I C-terminal domain
A9R16_007840	PF00580	UvrD/REP helicase N-terminal domain
A9R16_007840	PF13361	UvrD-like helicase C-terminal domain
A9R16_007860	PF01381	Helix-turn-helix
A9R16_007860	PF00717	Peptidase S24-like
A9R16_007960	PF00436	Single-strand binding protein family
A9R16_007975	PF00145	C-5 cytosine-specific DNA methylase
A9R16_007990	PF03852	DNA mismatch endonuclease Vsr
A9R16_008080	PF01751	Toprim domain
A9R16_008080	PF01131	DNA topoisomerase
A9R16_008135	PF02899	Phage integrase, N-terminal SAM-like domain
A9R16_008135	PF00589	Phage integrase family
A9R16_008235	PF00589	Phage integrase family
A9R16_008245	PF00005	ABC transporter
A9R16_008245	PF12848	ABC transporter
A9R16_008250	PF02391	MoaE protein
A9R16_008255	PF02597	ThiS family
A9R16_008260	PF06463	Molybdenum Cofactor Synthesis C
A9R16_008260	PF04055	Radical SAM superfamily
A9R16_008265	PF01967	MoaC family
A9R16_008270	PF04976	DMSO reductase anchor subunit (DmsC)
A9R16_008275	PF13247	4Fe-4S dicluster domain
A9R16_008275	PF12800	4Fe-4S binding domain
A9R16_008280	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A9R16_008280	PF00384	Molybdopterin oxidoreductase
A9R16_008280	PF01568	Molydopterin dinucleotide binding domain
A9R16_008285	PF01557	Fumarylacetoacetate (FAA) hydrolase family
A9R16_008290	PF08241	Methyltransferase domain
A9R16_008305	PF00459	Inositol monophosphatase family
A9R16_008315	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_008315	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_008315	PF00672	HAMP domain
A9R16_008320	PF00072	Response regulator receiver domain
A9R16_008320	PF00486	Transcriptional regulatory protein, C terminal
A9R16_008335	PF00498	FHA domain
A9R16_008335	PF12401	Protein of unknown function (DUF2662) 
A9R16_008340	PF01546	Peptidase family M20/M25/M40
A9R16_008340	PF07687	Peptidase dimerisation domain
A9R16_008345	PF14602	Hexapeptide repeat of succinyl-transferase
A9R16_008345	PF14805	Tetrahydrodipicolinate N-succinyltransferase N-terminal
A9R16_008345	PF00132	Bacterial transferase hexapeptide (six repeats)
A9R16_008350	PF00155	Aminotransferase class I and II
A9R16_008360	PF01168	Alanine racemase, N-terminal domain
A9R16_008370	PF02687	FtsX-like permease family
A9R16_008370	PF12704	MacB-like periplasmic core domain
A9R16_008375	PF00005	ABC transporter
A9R16_008380	PF01618	MotA/TolQ/ExbB proton channel family
A9R16_008385	PF02472	Biopolymer transport protein ExbD/TolR
A9R16_008390	PF00664	ABC transporter transmembrane region
A9R16_008390	PF00005	ABC transporter
A9R16_008400	PF02606	Tetraacyldisaccharide-1-P 4'-kinase
A9R16_008405	PF03966	Trm112p-like protein
A9R16_008410	PF02348	Cytidylyltransferase
A9R16_008420	PF01451	Low molecular weight phosphotyrosine protein phosphatase
A9R16_008425	PF00575	S1 RNA binding domain
A9R16_008425	PF12111	Polyribonucleotide phosphorylase C terminal
A9R16_008425	PF10150	Ribonuclease E/G family
A9R16_008430	PF00849	RNA pseudouridylate synthase
A9R16_008430	PF01479	S4 domain
A9R16_008435	PF13419	Haloacid dehalogenase-like hydrolase
A9R16_008450	PF01975	Survival protein SurE
A9R16_008460	PF01551	Peptidase family M23
A9R16_008460	PF01476	LysM domain
A9R16_008465	PF00140	Sigma-70 factor, region 1.2
A9R16_008465	PF04542	Sigma-70 region 2 
A9R16_008465	PF04539	Sigma-70 region 3
A9R16_008465	PF04545	Sigma-70, region 4
A9R16_008475	PF00155	Aminotransferase class I and II
A9R16_008480	PF01842	ACT domain
A9R16_008480	PF00742	Homoserine dehydrogenase
A9R16_008480	PF03447	Homoserine dehydrogenase, NAD binding domain
A9R16_008485	PF00291	Pyridoxal-phosphate dependent enzyme
A9R16_008495	PF01368	DHH family
A9R16_008495	PF02272	DHHA1 domain
A9R16_008495	PF17768	RecJ OB domain
A9R16_008505	PF00291	Pyridoxal-phosphate dependent enzyme
A9R16_008515	PF05958	tRNA (Uracil-5-)-methyltransferase
A9R16_008520	PF17969	L,D-transpeptidase C-terminal domain
A9R16_008520	PF03734	L,D-transpeptidase catalytic domain
A9R16_008525	PF00933	Glycosyl hydrolase family 3 N terminal domain
A9R16_008530	PF03167	Uracil DNA glycosylase superfamily
A9R16_008535	PF08459	UvrC Helix-hairpin-helix N-terminal
A9R16_008535	PF01541	GIY-YIG catalytic domain
A9R16_008535	PF02151	UvrB/uvrC motif
A9R16_008540	PF01066	CDP-alcohol phosphatidyltransferase
A9R16_008575	PF00690	Cation transporter/ATPase, N-terminus
A9R16_008575	PF00689	Cation transporting ATPase, C-terminus
A9R16_008580	PF00582	Universal stress protein family
A9R16_008610	PF13276	HTH-like domain
A9R16_008610	PF00665	Integrase core domain
A9R16_008610	PF13333	Integrase core domain
A9R16_008625	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
A9R16_008625	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
A9R16_008665	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
A9R16_008665	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
A9R16_008685	PF02817	e3 binding domain
A9R16_008685	PF00364	Biotin-requiring enzyme
A9R16_008685	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
A9R16_008690	PF01494	FAD binding domain
A9R16_008715	PF01648	4'-phosphopantetheinyl transferase superfamily
A9R16_008720	PF03472	Autoinducer binding domain
A9R16_008720	PF00196	Bacterial regulatory proteins, luxR family
A9R16_008735	PF13333	Integrase core domain
A9R16_008735	PF00665	Integrase core domain
A9R16_008735	PF13276	HTH-like domain
A9R16_008760	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)
A9R16_008770	PF01695	IstB-like ATP binding protein
A9R16_008775	PF00665	Integrase core domain
A9R16_008775	PF02796	Helix-turn-helix domain of resolvase
A9R16_008800	PF01255	Putative undecaprenyl diphosphate synthase
A9R16_008805	PF01966	HD domain
A9R16_008805	PF13286	Phosphohydrolase-associated domain
A9R16_008810	PF05175	Methyltransferase small domain
A9R16_008810	PF17827	PrmC N-terminal domain
A9R16_008830	PF00534	Glycosyl transferases group 1
A9R16_008830	PF13439	Glycosyltransferase Family 4
A9R16_008845	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
A9R16_008850	PF16861	Carbamoyltransferase C-terminus
A9R16_008850	PF02543	Carbamoyltransferase N-terminus
A9R16_008865	PF00474	Sodium:solute symporter family
A9R16_008875	PF01451	Low molecular weight phosphotyrosine protein phosphatase
A9R16_008880	PF06953	Arsenical resistance operon trans-acting repressor ArsD
A9R16_008885	PF02374	Anion-transporting ATPase
A9R16_008890	PF00403	Heavy-metal-associated domain
A9R16_008890	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_008890	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A9R16_008925	PF01026	TatD related DNase
A9R16_008940	PF02223	Thymidylate kinase
A9R16_008945	PF02618	YceG-like family
A9R16_008950	PF01063	Amino-transferase class IV
A9R16_008955	PF00425	chorismate binding enzyme
A9R16_008955	PF04715	Anthranilate synthase component I, N terminal region
A9R16_008960	PF00109	Beta-ketoacyl synthase, N-terminal domain
A9R16_008960	PF02801	Beta-ketoacyl synthase, C-terminal domain
A9R16_008965	PF00550	Phosphopantetheine attachment site
A9R16_008975	PF00698	Acyl transferase domain
A9R16_008980	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
A9R16_008980	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
A9R16_008985	PF02504	Fatty acid synthesis protein
A9R16_008990	PF01783	Ribosomal L32p protein family
A9R16_008995	PF02620	Large ribosomal RNA subunit accumulation protein YceD
A9R16_009005	PF00289	Biotin carboxylase, N-terminal domain
A9R16_009005	PF02785	Biotin carboxylase C-terminal domain
A9R16_009005	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
A9R16_009010	PF00682	HMGL-like
A9R16_009010	PF02436	Conserved carboxylase domain
A9R16_009010	PF00364	Biotin-requiring enzyme
A9R16_009015	PF02545	Maf-like protein
A9R16_009020	PF00155	Aminotransferase class I and II
A9R16_009030	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A9R16_009030	PF00205	Thiamine pyrophosphate enzyme, central domain
A9R16_009030	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
A9R16_009035	PF13378	Enolase C-terminal domain-like
A9R16_009035	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
A9R16_009040	PF01226	Formate/nitrite transporter
A9R16_009045	PF03601	Conserved hypothetical protein 698
A9R16_009055	PF12849	PBP superfamily domain
A9R16_009060	PF00528	Binding-protein-dependent transport system inner membrane component
A9R16_009065	PF00528	Binding-protein-dependent transport system inner membrane component
A9R16_009070	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_009070	PF08447	PAS fold
A9R16_009070	PF08448	PAS fold
A9R16_009070	PF00563	EAL domain
A9R16_009075	PF18073	Rubredoxin metal binding domain
A9R16_009085	PF00842	Alanine racemase, C-terminal domain
A9R16_009085	PF01168	Alanine racemase, N-terminal domain
A9R16_009090	PF00772	DnaB-like helicase N terminal domain
A9R16_009090	PF03796	DnaB-like helicase C terminal domain
A9R16_009095	PF03948	Ribosomal protein L9, C-terminal domain
A9R16_009095	PF01281	Ribosomal protein L9, N-terminal domain
A9R16_009100	PF01084	Ribosomal protein S18
A9R16_009105	PF01250	Ribosomal protein S6
A9R16_009110	PF00588	SpoU rRNA Methylase family
A9R16_009110	PF08032	RNA 2'-O ribose methyltransferase substrate binding
A9R16_009115	PF08206	Ribonuclease B OB domain
A9R16_009115	PF00773	RNB domain
A9R16_009115	PF00575	S1 RNA binding domain
A9R16_009115	PF08461	Ribonuclease R winged-helix domain
A9R16_009115	PF17876	Cold shock domain
A9R16_009125	PF00709	Adenylosuccinate synthetase
A9R16_009130	PF13393	Histidyl-tRNA synthetase
A9R16_009140	PF12221	Bacterial membrane protein N terminal
A9R16_009140	PF01145	SPFH domain / Band 7 family
A9R16_009165	PF00361	Proton-conducting membrane transporter
A9R16_009180	PF00361	Proton-conducting membrane transporter
A9R16_009185	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A9R16_009190	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A9R16_009195	PF00563	EAL domain
A9R16_009195	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_009195	PF03707	Bacterial signalling protein N terminal repeat
A9R16_009200	PF03717	Penicillin-binding Protein dimerisation domain
A9R16_009200	PF00905	Penicillin binding protein transpeptidase domain
A9R16_009225	PF13276	HTH-like domain
A9R16_009225	PF00665	Integrase core domain
A9R16_009225	PF13333	Integrase core domain
A9R16_009230	PF13276	HTH-like domain
A9R16_009230	PF00665	Integrase core domain
A9R16_009230	PF13333	Integrase core domain
A9R16_009250	PF00005	ABC transporter
A9R16_009265	PF02805	Metal binding domain of Ada
A9R16_009265	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
A9R16_009265	PF12833	Helix-turn-helix domain
A9R16_009265	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
A9R16_009285	PF06779	Uncharacterised MFS-type transporter YbfB
A9R16_009295	PF00654	Voltage gated chloride channel
A9R16_009300	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A9R16_009310	PF00890	FAD binding domain
A9R16_009315	PF12139	Adenosine-5'-phosphosulfate reductase beta subunit
A9R16_009315	PF13187	4Fe-4S dicluster domain
A9R16_009355	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
A9R16_009355	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
A9R16_009370	PF00303	Thymidylate synthase
A9R16_009375	PF00186	Dihydrofolate reductase
A9R16_009385	PF02774	Semialdehyde dehydrogenase, dimerisation domain
A9R16_009385	PF01118	Semialdehyde dehydrogenase, NAD binding domain
A9R16_009390	PF00180	Isocitrate/isopropylmalate dehydrogenase
A9R16_009395	PF00694	Aconitase C-terminal domain
A9R16_009400	PF00330	Aconitase family (aconitate hydratase)
A9R16_009410	PF12832	MFS_1 like family
A9R16_009415	PF01264	Chorismate synthase
A9R16_009425	PF03061	Thioesterase superfamily
A9R16_009430	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_009430	PF07724	AAA domain (Cdc48 subfamily)
A9R16_009430	PF17871	AAA lid domain
A9R16_009430	PF02861	Clp amino terminal domain, pathogenicity island component
A9R16_009430	PF10431	C-terminal, D2-small domain, of ClpB protein 
A9R16_009435	PF01914	MarC family integral membrane protein
A9R16_009445	PF10017	Histidine-specific methyltransferase, SAM-dependent
A9R16_009455	PF12867	DinB superfamily
A9R16_009455	PF03781	Sulfatase-modifying factor enzyme 1
A9R16_009460	PF02749	Quinolinate phosphoribosyl transferase, N-terminal domain
A9R16_009460	PF01729	Quinolinate phosphoribosyl transferase, C-terminal domain
A9R16_009465	PF01965	DJ-1/PfpI family
A9R16_009470	PF02578	Multi-copper polyphenol oxidoreductase laccase
A9R16_009475	PF00849	RNA pseudouridylate synthase
A9R16_009475	PF01479	S4 domain
A9R16_009480	PF13525	Outer membrane lipoprotein
A9R16_009485	PF00795	Carbon-nitrogen hydrolase
A9R16_009485	PF02540	NAD synthase
A9R16_009490	PF00549	CoA-ligase
A9R16_009490	PF02629	CoA binding domain
A9R16_009495	PF00549	CoA-ligase
A9R16_009495	PF08442	ATP-grasp domain
A9R16_009505	PF02321	Outer membrane efflux protein
A9R16_009515	PF03588	Leucyl/phenylalanyl-tRNA protein transferase
A9R16_009520	PF04377	Arginine-tRNA-protein transferase, C terminus
A9R16_009520	PF04376	Arginine-tRNA-protein transferase, N terminus
A9R16_009525	PF01176	Translation initiation factor 1A / IF-1
A9R16_009535	PF02861	Clp amino terminal domain, pathogenicity island component
A9R16_009535	PF10431	C-terminal, D2-small domain, of ClpB protein 
A9R16_009535	PF07724	AAA domain (Cdc48 subfamily)
A9R16_009535	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_009535	PF17871	AAA lid domain
A9R16_009540	PF02617	ATP-dependent Clp protease adaptor protein ClpS
A9R16_009545	PF00313	'Cold-shock' DNA-binding domain
A9R16_009550	PF00873	AcrB/AcrD/AcrF family
A9R16_009565	PF00180	Isocitrate/isopropylmalate dehydrogenase
A9R16_009570	PF00849	RNA pseudouridylate synthase
A9R16_009575	PF00293	NUDIX domain
A9R16_009590	PF00206	Lyase
A9R16_009590	PF08328	Adenylosuccinate lyase C-terminal
A9R16_009595	PF00226	DnaJ domain
A9R16_009595	PF01556	DnaJ C terminal domain
A9R16_009625	PF00920	Dehydratase family
A9R16_009630	PF00849	RNA pseudouridylate synthase
A9R16_009630	PF01479	S4 domain
A9R16_009635	PF01180	Dihydroorotate dehydrogenase
A9R16_009660	PF04371	Porphyromonas-type peptidyl-arginine deiminase
A9R16_009665	PF00795	Carbon-nitrogen hydrolase
A9R16_009670	PF01029	NusB family
A9R16_009670	PF01189	16S rRNA methyltransferase RsmB/F
A9R16_009690	PF09335	SNARE associated Golgi protein
A9R16_009695	PF00313	'Cold-shock' DNA-binding domain
A9R16_009700	PF01817	Chorismate mutase type II
A9R16_009700	PF00793	DAHP synthetase I family
A9R16_009705	PF00285	Citrate synthase, C-terminal domain
A9R16_009710	PF02113	D-Ala-D-Ala carboxypeptidase 3 (S13) family
A9R16_009715	PF02358	Trehalose-phosphatase
A9R16_009720	PF00924	Mechanosensitive ion channel
A9R16_009725	PF00982	Glycosyltransferase family 20
A9R16_009730	PF13361	UvrD-like helicase C-terminal domain
A9R16_009730	PF00580	UvrD/REP helicase N-terminal domain
A9R16_009740	PF08448	PAS fold
A9R16_009740	PF08447	PAS fold
A9R16_009740	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_009740	PF00563	EAL domain
A9R16_009745	PF01734	Patatin-like phospholipase
A9R16_009755	PF02899	Phage integrase, N-terminal SAM-like domain
A9R16_009755	PF00589	Phage integrase family
A9R16_009760	PF01245	Ribosomal protein L19
A9R16_009765	PF01746	tRNA (Guanine-1)-methyltransferase
A9R16_009770	PF05239	PRC-barrel domain
A9R16_009770	PF01782	RimM N-terminal domain
A9R16_009775	PF00886	Ribosomal protein S16
A9R16_009780	PF04333	MlaA lipoprotein
A9R16_009790	PF00849	RNA pseudouridylate synthase
A9R16_009790	PF01479	S4 domain
A9R16_009795	PF04079	Segregation and condensation complex subunit ScpB
A9R16_009800	PF02616	Segregation and condensation protein ScpA
A9R16_009805	PF00579	tRNA synthetases class I (W and Y)
A9R16_009810	PF02163	Peptidase family M50
A9R16_009815	PF01300	Telomere recombination
A9R16_009820	PF02811	PHP domain
A9R16_009830	PF03795	YCII-related domain
A9R16_009845	PF12826	Helix-hairpin-helix motif
A9R16_009845	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
A9R16_009845	PF03120	NAD-dependent DNA ligase OB-fold domain
A9R16_009845	PF01653	NAD-dependent DNA ligase adenylation domain
A9R16_009845	PF00533	BRCA1 C Terminus (BRCT) domain
A9R16_009850	PF04354	ZipA, C-terminal FtsZ-binding domain
A9R16_009855	PF06470	SMC proteins Flexible Hinge Domain
A9R16_009855	PF02463	RecF/RecN/SMC N terminal domain
A9R16_009860	PF14489	QueF-like protein
A9R16_009865	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
A9R16_009870	PF00563	EAL domain
A9R16_009870	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_009870	PF03707	Bacterial signalling protein N terminal repeat
A9R16_009885	PF02321	Outer membrane efflux protein
A9R16_009890	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
A9R16_009895	PF00873	AcrB/AcrD/AcrF family
A9R16_009900	PF00873	AcrB/AcrD/AcrF family
A9R16_009910	PF00293	NUDIX domain
A9R16_009920	PF17113	Regulatory signalling modulator protein AmpE
A9R16_009920	PF03186	CobD/Cbib protein
A9R16_009925	PF01510	N-acetylmuramoyl-L-alanine amidase
A9R16_009930	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_009930	PF03466	LysR substrate binding domain
A9R16_009935	PF01810	LysE type translocator
A9R16_009940	PF03707	Bacterial signalling protein N terminal repeat
A9R16_009940	PF00563	EAL domain
A9R16_009940	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_009945	PF04286	Protein of unknown function (DUF445)
A9R16_009950	PF13180	PDZ domain
A9R16_009955	PF02754	Cysteine-rich domain
A9R16_009955	PF13183	4Fe-4S dicluster domain
A9R16_009970	PF01425	Amidase
A9R16_009990	PF12323	Helix-turn-helix domain
A9R16_009990	PF01385	Probable transposase
A9R16_009990	PF07282	Putative transposase DNA-binding domain
A9R16_009995	PF00529	HlyD membrane-fusion protein of T1SS
A9R16_009995	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
A9R16_010000	PF02321	Outer membrane efflux protein
A9R16_010005	PF07690	Major Facilitator Superfamily
A9R16_010025	PF00403	Heavy-metal-associated domain
A9R16_010035	PF13098	Thioredoxin-like domain
A9R16_010040	PF04542	Sigma-70 region 2 
A9R16_010040	PF08281	Sigma-70, region 4
A9R16_010070	PF08534	Redoxin
A9R16_010070	PF00462	Glutaredoxin
A9R16_010075	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A9R16_010075	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_010080	PF01636	Phosphotransferase enzyme family
A9R16_010085	PF04293	SpoVR like protein
A9R16_010090	PF04285	Protein of unknown function (DUF444)
A9R16_010095	PF06798	PrkA serine protein kinase C-terminal domain
A9R16_010095	PF08298	PrkA AAA domain
A9R16_010100	PF07690	Major Facilitator Superfamily
A9R16_010125	PF01906	Putative heavy-metal-binding
A9R16_010140	PF02678	Pirin
A9R16_010140	PF05726	Pirin C-terminal cupin domain
A9R16_010155	PF08406	CbbQ/NirQ/NorQ C-terminal 
A9R16_010155	PF07728	AAA domain (dynein-related subfamily)
A9R16_010165	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
A9R16_010175	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
A9R16_010175	PF00361	Proton-conducting membrane transporter
A9R16_010200	PF00210	Ferritin-like domain
A9R16_010205	PF00936	BMC domain
A9R16_010210	PF00936	BMC domain
A9R16_010215	PF00936	BMC domain
A9R16_010240	PF00101	Ribulose bisphosphate carboxylase, small chain
A9R16_010245	PF02788	Ribulose bisphosphate carboxylase large chain, N-terminal domain
A9R16_010245	PF00016	Ribulose bisphosphate carboxylase large chain, catalytic domain
A9R16_010250	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_010250	PF03466	LysR substrate binding domain
A9R16_010255	PF01011	PQQ enzyme repeat
A9R16_010255	PF13360	PQQ-like domain
A9R16_010255	PF13570	PQQ-like domain
A9R16_010265	PF07732	Multicopper oxidase
A9R16_010275	PF16360	GTP-binding GTPase Middle Region
A9R16_010275	PF13167	GTP-binding GTPase N-terminal
A9R16_010275	PF01926	50S ribosome-binding GTPase
A9R16_010280	PF17209	Hfq protein
A9R16_010290	PF00152	tRNA synthetases class II (D, K and N) 
A9R16_010290	PF01336	OB-fold nucleic acid binding domain
A9R16_010295	PF00472	RF-1 domain
A9R16_010295	PF03462	PCRF domain
A9R16_010305	PF17941	Polyphosphate kinase C-terminal domain 1
A9R16_010305	PF02503	Polyphosphate kinase middle domain
A9R16_010305	PF13090	Polyphosphate kinase C-terminal domain 2
A9R16_010305	PF13089	Polyphosphate kinase N-terminal domain
A9R16_010320	PF08241	Methyltransferase domain
A9R16_010340	PF03707	Bacterial signalling protein N terminal repeat
A9R16_010340	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_010340	PF00563	EAL domain
A9R16_010345	PF07690	Major Facilitator Superfamily
A9R16_010370	PF03069	Acetamidase/Formamidase family
A9R16_010375	PF01627	Hpt domain
A9R16_010375	PF00072	Response regulator receiver domain
A9R16_010375	PF09984	Uncharacterised signal transduction histidine kinase domain (DUF2222)
A9R16_010375	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_010375	PF00672	HAMP domain
A9R16_010375	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_010380	PF00072	Response regulator receiver domain
A9R16_010380	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_010385	PF00316	Fructose-1-6-bisphosphatase, N-terminal domain
A9R16_010400	PF02705	K+ potassium transporter
A9R16_010405	PF02705	K+ potassium transporter
A9R16_010425	PF01011	PQQ enzyme repeat
A9R16_010425	PF13360	PQQ-like domain
A9R16_010425	PF13570	PQQ-like domain
A9R16_010430	PF01040	UbiA prenyltransferase family
A9R16_010445	PF00510	Cytochrome c oxidase subunit III
A9R16_010450	PF00115	Cytochrome C and Quinol oxidase polypeptide I
A9R16_010455	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
A9R16_010455	PF06481	COX Aromatic Rich Motif
A9R16_010465	PF00128	Alpha amylase, catalytic domain
A9R16_010470	PF00128	Alpha amylase, catalytic domain
A9R16_010470	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
A9R16_010470	PF11941	Domain of unknown function (DUF3459)
A9R16_010475	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
A9R16_010475	PF00128	Alpha amylase, catalytic domain
A9R16_010485	PF00128	Alpha amylase, catalytic domain
A9R16_010485	PF16657	Maltogenic Amylase, C-terminal domain
A9R16_010490	PF11896	Domain of unknown function (DUF3416)
A9R16_010490	PF00128	Alpha amylase, catalytic domain
A9R16_010495	PF00128	Alpha amylase, catalytic domain
A9R16_010495	PF02806	Alpha amylase, C-terminal all-beta domain
A9R16_010495	PF02922	Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
A9R16_010500	PF00343	Carbohydrate phosphorylase
A9R16_010500	PF11897	Protein of unknown function (DUF3417)
A9R16_010515	PF00158	Sigma-54 interaction domain
A9R16_010515	PF00072	Response regulator receiver domain
A9R16_010530	PF02446	4-alpha-glucanotransferase
A9R16_010540	PF00483	Nucleotidyl transferase
A9R16_010545	PF00342	Phosphoglucose isomerase
A9R16_010550	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
A9R16_010550	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
A9R16_010555	PF02685	Glucokinase
A9R16_010560	PF01738	Dienelactone hydrolase family
A9R16_010565	PF08323	Starch synthase catalytic domain
A9R16_010565	PF00534	Glycosyl transferases group 1
A9R16_010575	PF01027	Inhibitor of apoptosis-promoting Bax1
A9R16_010585	PF18267	Rubredoxin NAD+ reductase C-terminal domain
A9R16_010585	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_010585	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
A9R16_010585	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
A9R16_010585	PF04324	BFD-like [2Fe-2S] binding domain
A9R16_010590	PF00355	Rieske [2Fe-2S] domain
A9R16_010595	PF02885	Glycosyl transferase family, helical bundle domain
A9R16_010600	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_010600	PF03707	Bacterial signalling protein N terminal repeat
A9R16_010600	PF00563	EAL domain
A9R16_010605	PF00561	alpha/beta hydrolase fold
A9R16_010610	PF07690	Major Facilitator Superfamily
A9R16_010615	PF00929	Exonuclease
A9R16_010620	PF00075	RNase H
A9R16_010625	PF08241	Methyltransferase domain
A9R16_010630	PF16123	Hydroxyacylglutathione hydrolase C-terminus
A9R16_010630	PF00753	Metallo-beta-lactamase superfamily
A9R16_010635	PF01476	LysM domain
A9R16_010635	PF01464	Transglycosylase SLT domain
A9R16_010645	PF13145	PPIC-type PPIASE domain
A9R16_010660	PF02634	FdhD/NarQ family
A9R16_010670	PF00216	Bacterial DNA-binding protein
A9R16_010675	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_010675	PF05362	Lon protease (S16) C-terminal proteolytic domain
A9R16_010675	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
A9R16_010680	PF07724	AAA domain (Cdc48 subfamily)
A9R16_010680	PF06689	ClpX C4-type zinc finger
A9R16_010680	PF10431	C-terminal, D2-small domain, of ClpB protein 
A9R16_010685	PF00574	Clp protease
A9R16_010690	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A9R16_010690	PF05698	Bacterial trigger factor protein (TF) C-terminus
A9R16_010690	PF05697	Bacterial trigger factor protein (TF)
A9R16_010700	PF01259	SAICAR synthetase
A9R16_010705	PF00183	Hsp90 protein
A9R16_010705	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_010710	PF00563	EAL domain
A9R16_010710	PF03707	Bacterial signalling protein N terminal repeat
A9R16_010710	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_010730	PF01075	Glycosyltransferase family 9 (heptosyltransferase)
A9R16_010765	PF00534	Glycosyl transferases group 1
A9R16_010765	PF17103	Stealth protein CR4, conserved region 4
A9R16_010765	PF17102	Stealth protein CR3, conserved region 3
A9R16_010765	PF11380	Stealth protein CR2, conserved region 2
A9R16_010765	PF17101	Stealth protein CR1, conserved region 1
A9R16_010775	PF00563	EAL domain
A9R16_010775	PF05231	MASE1
A9R16_010780	PF03705	CheR methyltransferase, all-alpha domain
A9R16_010780	PF01339	CheB methylesterase
A9R16_010780	PF01739	CheR methyltransferase, SAM binding domain
A9R16_010780	PF08448	PAS fold
A9R16_010785	PF16363	GDP-mannose 4,6 dehydratase
A9R16_010790	PF00909	Ammonium Transporter Family
A9R16_010800	PF02798	Glutathione S-transferase, N-terminal domain
A9R16_010805	PF07282	Putative transposase DNA-binding domain
A9R16_010805	PF12323	Helix-turn-helix domain
A9R16_010805	PF01385	Probable transposase
A9R16_010810	PF00581	Rhodanese-like domain
A9R16_010820	PF00216	Bacterial DNA-binding protein
A9R16_010825	PF03484	tRNA synthetase B5 domain
A9R16_010825	PF03147	Ferredoxin-fold anticodon binding domain
A9R16_010825	PF01588	Putative tRNA binding domain
A9R16_010825	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
A9R16_010825	PF03483	B3/4 domain
A9R16_010830	PF01409	tRNA synthetases class II core domain (F)
A9R16_010830	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
A9R16_010835	PF00453	Ribosomal protein L20
A9R16_010840	PF01632	Ribosomal protein L35
A9R16_010845	PF05198	Translation initiation factor IF-3, N-terminal domain
A9R16_010845	PF00707	Translation initiation factor IF-3, C-terminal domain
A9R16_010850	PF02824	TGS domain
A9R16_010850	PF03129	Anticodon binding domain
A9R16_010850	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A9R16_010850	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
A9R16_010860	PF00271	Helicase conserved C-terminal domain
A9R16_010860	PF04851	Type III restriction enzyme, res subunit
A9R16_010860	PF12344	Ultra-violet resistance protein B
A9R16_010860	PF17757	UvrB interaction domain
A9R16_010860	PF02151	UvrB/uvrC motif
A9R16_010865	PF00155	Aminotransferase class I and II
A9R16_010890	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
A9R16_010890	PF14833	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
A9R16_010895	PF05145	Transition state regulatory protein AbrB
A9R16_010900	PF00589	Phage integrase family
A9R16_010915	PF13276	HTH-like domain
A9R16_010915	PF00665	Integrase core domain
A9R16_010915	PF13333	Integrase core domain
A9R16_010945	PF04542	Sigma-70 region 2 
A9R16_010945	PF08281	Sigma-70, region 4
A9R16_010980	PF13276	HTH-like domain
A9R16_010980	PF13333	Integrase core domain
A9R16_010980	PF00665	Integrase core domain
A9R16_011010	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
A9R16_011015	PF00510	Cytochrome c oxidase subunit III
A9R16_011020	PF00115	Cytochrome C and Quinol oxidase polypeptide I
A9R16_011025	PF06481	COX Aromatic Rich Motif
A9R16_011025	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
A9R16_011030	PF02798	Glutathione S-transferase, N-terminal domain
A9R16_011030	PF00043	Glutathione S-transferase, C-terminal domain
A9R16_011035	PF05199	GMC oxidoreductase
A9R16_011035	PF00732	GMC oxidoreductase
A9R16_011075	PF13243	Squalene-hopene cyclase C-terminal domain
A9R16_011075	PF13249	Squalene-hopene cyclase N-terminal domain
A9R16_011095	PF04794	YdjC-like protein
A9R16_011110	PF01370	NAD dependent epimerase/dehydratase family
A9R16_011115	PF04333	MlaA lipoprotein
A9R16_011125	PF00535	Glycosyl transferase family 2
A9R16_011130	PF06463	Molybdenum Cofactor Synthesis C
A9R16_011130	PF04055	Radical SAM superfamily
A9R16_011135	PF02401	LytB protein
A9R16_011145	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
A9R16_011150	PF00255	Glutathione peroxidase
A9R16_011155	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
A9R16_011170	PF13185	GAF domain
A9R16_011170	PF00563	EAL domain
A9R16_011170	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_011175	PF12323	Helix-turn-helix domain
A9R16_011175	PF01385	Probable transposase
A9R16_011175	PF07282	Putative transposase DNA-binding domain
A9R16_011185	PF01797	Transposase IS200 like
A9R16_011195	PF01145	SPFH domain / Band 7 family
A9R16_011195	PF16200	C-terminal region of band_7
A9R16_011200	PF01790	Prolipoprotein diacylglyceryl transferase
A9R16_011210	PF17092	Penicillin-binding protein OB-like domain
A9R16_011210	PF00912	Transglycosylase
A9R16_011210	PF00905	Penicillin binding protein transpeptidase domain
A9R16_011215	PF03747	ADP-ribosylglycohydrolase
A9R16_011225	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_011225	PF17862	AAA+ lid domain
A9R16_011225	PF06480	FtsH Extracellular
A9R16_011225	PF01434	Peptidase family M41
A9R16_011250	PF03707	Bacterial signalling protein N terminal repeat
A9R16_011250	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_011250	PF00563	EAL domain
A9R16_011255	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_011255	PF13185	GAF domain
A9R16_011260	PF01548	Transposase
A9R16_011260	PF02371	Transposase IS116/IS110/IS902 family
A9R16_011275	PF01475	Ferric uptake regulator family
A9R16_011280	PF01266	FAD dependent oxidoreductase
A9R16_011285	PF02401	LytB protein
A9R16_011290	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A9R16_011295	PF01252	Signal peptidase (SPase) II
A9R16_011300	PF08264	Anticodon-binding domain of tRNA
A9R16_011300	PF00133	tRNA synthetases class I (I, L, M and V)
A9R16_011300	PF06827	Zinc finger found in FPG and IleRS
A9R16_011305	PF06574	FAD synthetase
A9R16_011305	PF01687	Riboflavin kinase
A9R16_011315	PF03023	Lipid II flippase MurJ
A9R16_011320	PF01649	Ribosomal protein S20
A9R16_011325	PF00696	Amino acid kinase family
A9R16_011325	PF01472	PUA domain
A9R16_011330	PF01018	GTP1/OBG
A9R16_011330	PF01926	50S ribosome-binding GTPase
A9R16_011335	PF01016	Ribosomal L27 protein
A9R16_011340	PF00829	Ribosomal prokaryotic L21 protein
A9R16_011345	PF00348	Polyprenyl synthetase
A9R16_011360	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_011360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_011365	PF02954	Bacterial regulatory protein, Fis family
A9R16_011365	PF00158	Sigma-54 interaction domain
A9R16_011365	PF00072	Response regulator receiver domain
A9R16_011395	PF00482	Type II secretion system (T2SS), protein F
A9R16_011415	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_011425	PF01925	Sulfite exporter TauE/SafE
A9R16_011430	PF03069	Acetamidase/Formamidase family
A9R16_011435	PF01042	Endoribonuclease L-PSP
A9R16_011440	PF00005	ABC transporter
A9R16_011490	PF03934	Type II secretion system (T2SS), protein K
A9R16_011495	PF11612	Type II secretion system (T2SS), protein J
A9R16_011495	PF07963	Prokaryotic N-terminal methylation motif
A9R16_011500	PF07963	Prokaryotic N-terminal methylation motif
A9R16_011500	PF02501	Type II secretion system (T2SS), protein I
A9R16_011505	PF12019	Type II transport protein GspH
A9R16_011505	PF07963	Prokaryotic N-terminal methylation motif
A9R16_011510	PF08334	Type II secretion system (T2SS), protein G
A9R16_011510	PF07963	Prokaryotic N-terminal methylation motif
A9R16_011515	PF00482	Type II secretion system (T2SS), protein F
A9R16_011520	PF00437	Type II/IV secretion system protein
A9R16_011525	PF03958	Bacterial type II/III secretion system short domain
A9R16_011525	PF00263	Bacterial type II and III secretion system protein
A9R16_011540	PF08240	Alcohol dehydrogenase GroES-like domain
A9R16_011540	PF00107	Zinc-binding dehydrogenase
A9R16_011545	PF00982	Glycosyltransferase family 20
A9R16_011550	PF05116	Sucrose-6F-phosphate phosphohydrolase
A9R16_011550	PF00982	Glycosyltransferase family 20
A9R16_011555	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
A9R16_011555	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
A9R16_011560	PF01434	Peptidase family M41
A9R16_011560	PF06480	FtsH Extracellular
A9R16_011560	PF17862	AAA+ lid domain
A9R16_011560	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_011565	PF01676	Metalloenzyme superfamily
A9R16_011565	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
A9R16_011570	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
A9R16_011570	PF01676	Metalloenzyme superfamily
A9R16_011585	PF02321	Outer membrane efflux protein
A9R16_011590	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
A9R16_011595	PF00005	ABC transporter
A9R16_011660	PF00563	EAL domain
A9R16_011660	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_011660	PF03707	Bacterial signalling protein N terminal repeat
A9R16_011665	PF00158	Sigma-54 interaction domain
A9R16_011665	PF00072	Response regulator receiver domain
A9R16_011665	PF02954	Bacterial regulatory protein, Fis family
A9R16_011670	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_011670	PF00989	PAS fold
A9R16_011670	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_011690	PF02798	Glutathione S-transferase, N-terminal domain
A9R16_011690	PF00043	Glutathione S-transferase, C-terminal domain
A9R16_011720	PF02411	MerT mercuric transport protein
A9R16_011725	PF00723	Glycosyl hydrolases family 15
A9R16_011735	PF01925	Sulfite exporter TauE/SafE
A9R16_011745	PF00510	Cytochrome c oxidase subunit III
A9R16_011750	PF00115	Cytochrome C and Quinol oxidase polypeptide I
A9R16_011755	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
A9R16_011755	PF06481	COX Aromatic Rich Motif
A9R16_011765	PF01008	Initiation factor 2 subunit family
A9R16_011770	PF01979	Amidohydrolase family
A9R16_011780	PF13419	Haloacid dehalogenase-like hydrolase
A9R16_011785	PF01242	6-pyruvoyl tetrahydropterin synthase
A9R16_011790	PF13419	Haloacid dehalogenase-like hydrolase
A9R16_011795	PF01258	Prokaryotic dksA/traR C4-type zinc finger
A9R16_011800	PF09335	SNARE associated Golgi protein
A9R16_011805	PF16177	Acetyl-coenzyme A synthetase N-terminus
A9R16_011805	PF00501	AMP-binding enzyme
A9R16_011805	PF13193	AMP-binding enzyme C-terminal domain
A9R16_011810	PF00561	alpha/beta hydrolase fold
A9R16_011825	PF00575	S1 RNA binding domain
A9R16_011825	PF00013	KH domain
A9R16_011825	PF01138	3' exoribonuclease family, domain 1
A9R16_011825	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
A9R16_011825	PF03725	3' exoribonuclease family, domain 2
A9R16_011830	PF00312	Ribosomal protein S15
A9R16_011835	PF16198	tRNA pseudouridylate synthase B C-terminal domain
A9R16_011835	PF01509	TruB family pseudouridylate synthase (N terminal domain)
A9R16_011835	PF09157	Pseudouridine synthase II TruB, C-terminal
A9R16_011840	PF02033	Ribosome-binding factor A
A9R16_011845	PF00009	Elongation factor Tu GTP binding domain
A9R16_011845	PF11987	Translation-initiation factor 2
A9R16_011845	PF08364	Bacterial translation initiation factor IF-2 associated region
A9R16_011845	PF04760	Translation initiation factor IF-2, N-terminal region
A9R16_011850	PF08529	NusA N-terminal domain
A9R16_011850	PF13184	NusA-like KH domain
A9R16_011855	PF02576	RimP N-terminal domain
A9R16_011855	PF17384	RimP C-terminal SH3 domain
A9R16_011910	PF00361	Proton-conducting membrane transporter
A9R16_011915	PF01059	NADH-ubiquinone oxidoreductase chain 4, amino terminus
A9R16_011915	PF00361	Proton-conducting membrane transporter
A9R16_011920	PF00361	Proton-conducting membrane transporter
A9R16_011920	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
A9R16_011925	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
A9R16_011930	PF00499	NADH-ubiquinone/plastoquinone oxidoreductase chain 6
A9R16_011935	PF12838	4Fe-4S dicluster domain
A9R16_011940	PF00146	NADH dehydrogenase
A9R16_011945	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal
A9R16_011945	PF00384	Molybdopterin oxidoreductase
A9R16_011945	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A9R16_011950	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit
A9R16_011950	PF10531	SLBB domain
A9R16_011950	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
A9R16_011960	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit
A9R16_011965	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit
A9R16_011970	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit
A9R16_011975	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
A9R16_011985	PF03840	Preprotein translocase SecG subunit
A9R16_011990	PF00121	Triosephosphate isomerase
A9R16_011995	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A9R16_011995	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A9R16_011995	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A9R16_011995	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A9R16_012000	PF00809	Pterin binding enzyme
A9R16_012005	PF17862	AAA+ lid domain
A9R16_012005	PF06480	FtsH Extracellular
A9R16_012005	PF01434	Peptidase family M41
A9R16_012005	PF00004	ATPase family associated with various cellular activities (AAA)
A9R16_012010	PF01728	FtsJ-like methyltransferase
A9R16_012020	PF01272	Transcription elongation factor, GreA/GreB, C-term
A9R16_012020	PF03449	Transcription elongation factor, N-terminal
A9R16_012025	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
A9R16_012025	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A9R16_012025	PF02142	MGS-like domain
A9R16_012030	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
A9R16_012030	PF00117	Glutamine amidotransferase class-I
A9R16_012035	PF05173	Dihydrodipicolinate reductase, C-terminus
A9R16_012035	PF01113	Dihydrodipicolinate reductase, N-terminus
A9R16_012045	PF00226	DnaJ domain
A9R16_012045	PF01556	DnaJ C terminal domain
A9R16_012045	PF00684	DnaJ central domain
A9R16_012050	PF00012	Hsp70 protein
A9R16_012055	PF01025	GrpE
A9R16_012060	PF01628	HrcA protein C terminal domain
A9R16_012065	PF01513	ATP-NAD kinase
A9R16_012070	PF02463	RecF/RecN/SMC N terminal domain
A9R16_012075	PF00583	Acetyltransferase (GNAT) family
A9R16_012075	PF00696	Amino acid kinase family
A9R16_012080	PF01475	Ferric uptake regulator family
A9R16_012085	PF04355	SmpA / OmlA family
A9R16_012090	PF03658	RnfH family Ubiquitin
A9R16_012095	PF03364	Polyketide cyclase / dehydrase and lipid transport
A9R16_012100	PF00209	Sodium:neurotransmitter symporter family
A9R16_012105	PF01668	SmpB protein
A9R16_012175	PF00719	Inorganic pyrophosphatase
A9R16_012185	PF02609	Exonuclease VII small subunit
A9R16_012190	PF00348	Polyprenyl synthetase
A9R16_012195	PF02780	Transketolase, C-terminal domain
A9R16_012195	PF13292	1-deoxy-D-xylulose-5-phosphate synthase
A9R16_012195	PF02779	Transketolase, pyrimidine binding domain
A9R16_012200	PF02649	Type I GTP cyclohydrolase folE2
A9R16_012210	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
A9R16_012210	PF00529	HlyD membrane-fusion protein of T1SS
A9R16_012220	PF07690	Major Facilitator Superfamily
A9R16_012225	PF00117	Glutamine amidotransferase class-I
A9R16_012230	PF00480	ROK family
A9R16_012235	PF01797	Transposase IS200 like
A9R16_012240	PF12323	Helix-turn-helix domain
A9R16_012240	PF07282	Putative transposase DNA-binding domain
A9R16_012240	PF01385	Probable transposase
A9R16_012245	PF04073	Aminoacyl-tRNA editing domain
A9R16_012245	PF03129	Anticodon binding domain
A9R16_012245	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
A9R16_012250	PF11873	Membrane-bound lytic murein transglycosylase C, N-terminal domain
A9R16_012250	PF01464	Transglycosylase SLT domain
A9R16_012260	PF00708	Acylphosphatase
A9R16_012270	PF04055	Radical SAM superfamily
A9R16_012280	PF08207	Elongation factor P (EF-P) KOW-like domain
A9R16_012280	PF01132	Elongation factor P (EF-P) OB domain
A9R16_012280	PF09285	Elongation factor P, C-terminal
A9R16_012285	PF00152	tRNA synthetases class II (D, K and N) 
A9R16_012290	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
A9R16_012295	PF00753	Metallo-beta-lactamase superfamily
A9R16_012295	PF00581	Rhodanese-like domain
A9R16_012305	PF07690	Major Facilitator Superfamily
A9R16_012315	PF01339	CheB methylesterase
A9R16_012315	PF00072	Response regulator receiver domain
A9R16_012330	PF01106	NifU-like domain
A9R16_012345	PF05724	Thiopurine S-methyltransferase (TPMT)
A9R16_012350	PF00459	Inositol monophosphatase family
A9R16_012355	PF00206	Lyase
A9R16_012355	PF10415	Fumarase C C-terminus
A9R16_012360	PF03358	NADPH-dependent FMN reductase
A9R16_012365	PF00308	Bacterial dnaA  protein
A9R16_012365	PF08299	Bacterial dnaA protein helix-turn-helix
A9R16_012370	PF01594	AI-2E family transporter
A9R16_012375	PF01066	CDP-alcohol phosphatidyltransferase
A9R16_012380	PF00586	AIR synthase related protein, N-terminal domain
A9R16_012380	PF02769	AIR synthase related protein, C-terminal domain
A9R16_012385	PF00551	Formyl transferase
A9R16_012390	PF04542	Sigma-70 region 2 
A9R16_012390	PF08281	Sigma-70, region 4
A9R16_012405	PF00293	NUDIX domain
A9R16_012425	PF00471	Ribosomal protein L33
A9R16_012430	PF00830	Ribosomal L28 family
A9R16_012435	PF00384	Molybdopterin oxidoreductase
A9R16_012435	PF01568	Molydopterin dinucleotide binding domain
A9R16_012435	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A9R16_012435	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A9R16_012435	PF12838	4Fe-4S dicluster domain
A9R16_012445	PF04002	RadC-like JAB domain
A9R16_012450	PF02441	Flavoprotein
A9R16_012450	PF04127	DNA / pantothenate metabolism flavoprotein
A9R16_012455	PF00692	dUTPase
A9R16_012460	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
A9R16_012460	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
A9R16_012460	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
A9R16_012460	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
A9R16_012475	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
A9R16_012475	PF08240	Alcohol dehydrogenase GroES-like domain
A9R16_012490	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_012490	PF03459	TOBE domain
A9R16_012495	PF00692	dUTPase
A9R16_012505	PF10609	NUBPL iron-transfer P-loop NTPase
A9R16_012515	PF01588	Putative tRNA binding domain
A9R16_012515	PF09334	tRNA synthetases class I (M)
A9R16_012565	PF00873	AcrB/AcrD/AcrF family
A9R16_012570	PF06508	Queuosine biosynthesis protein QueC
A9R16_012575	PF04060	Putative Fe-S cluster
A9R16_012580	PF10576	Iron-sulfur binding domain of endonuclease III
A9R16_012580	PF00633	Helix-hairpin-helix motif
A9R16_012580	PF00730	HhH-GPD superfamily base excision DNA repair protein
A9R16_012605	PF13188	PAS domain
A9R16_012605	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_012605	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_012605	PF00989	PAS fold
A9R16_012610	PF00764	Arginosuccinate synthase
A9R16_012615	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_012615	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A9R16_012620	PF00364	Biotin-requiring enzyme
A9R16_012620	PF02779	Transketolase, pyrimidine binding domain
A9R16_012620	PF02780	Transketolase, C-terminal domain
A9R16_012625	PF00676	Dehydrogenase E1 component
A9R16_012630	PF00883	Cytosol aminopeptidase family, catalytic domain
A9R16_012630	PF02789	Cytosol aminopeptidase family, N-terminal domain
A9R16_012635	PF00202	Aminotransferase class-III
A9R16_012640	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
A9R16_012640	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
A9R16_012650	PF00005	ABC transporter
A9R16_012650	PF12848	ABC transporter
A9R16_012655	PF00664	ABC transporter transmembrane region
A9R16_012655	PF00005	ABC transporter
A9R16_012685	PF01597	Glycine cleavage H-protein
A9R16_012695	PF03099	Biotin/lipoate A/B protein ligase family
A9R16_012695	PF10437	Bacterial lipoate protein ligase C-terminus
A9R16_012700	PF02769	AIR synthase related protein, C-terminal domain
A9R16_012700	PF18076	Formylglycinamide ribonucleotide amidotransferase N-terminal
A9R16_012700	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
A9R16_012705	PF00701	Dihydrodipicolinate synthetase family
A9R16_012710	PF00072	Response regulator receiver domain
A9R16_012710	PF13188	PAS domain
A9R16_012710	PF08448	PAS fold
A9R16_012710	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_012710	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_012715	PF01627	Hpt domain
A9R16_012715	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_012715	PF00072	Response regulator receiver domain
A9R16_012715	PF00512	His Kinase A (phospho-acceptor) domain
A9R16_012720	PF00578	AhpC/TSA family
A9R16_012725	PF02562	PhoH-like protein
A9R16_012725	PF13638	PIN domain
A9R16_012730	PF02040	Arsenical pump membrane protein
A9R16_012740	PF01416	tRNA pseudouridine synthase
A9R16_012745	PF00521	DNA gyrase/topoisomerase IV, subunit A
A9R16_012745	PF03989	DNA gyrase C-terminal domain, beta-propeller
A9R16_012750	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
A9R16_012750	PF01751	Toprim domain
A9R16_012750	PF00204	DNA gyrase B
A9R16_012750	PF00986	DNA gyrase B subunit, carboxyl terminus
A9R16_012770	PF02915	Rubrerythrin
A9R16_012775	PF00437	Type II/IV secretion system protein
A9R16_012775	PF05157	Type II secretion system (T2SS), protein E, N-terminal domain
A9R16_012780	PF01478	Type IV leader peptidase family
A9R16_012780	PF06750	Bacterial Peptidase A24 N-terminal domain
A9R16_012785	PF01121	Dephospho-CoA kinase
A9R16_012810	PF00005	ABC transporter
A9R16_012810	PF12857	TOBE-like domain
A9R16_012825	PF00158	Sigma-54 interaction domain
A9R16_012825	PF02954	Bacterial regulatory protein, Fis family
A9R16_012825	PF00072	Response regulator receiver domain
A9R16_012835	PF00484	Carbonic anhydrase
A9R16_012845	PF00472	RF-1 domain
A9R16_012850	PF00293	NUDIX domain
A9R16_012855	PF01960	ArgJ family
A9R16_012860	PF02810	SEC-C motif
A9R16_012860	PF07517	SecA DEAD-like domain
A9R16_012860	PF01043	SecA preprotein cross-linking domain
A9R16_012860	PF07516	SecA Wing and Scaffold domain
A9R16_012865	PF04225	Opacity-associated protein A LysM-like domain
A9R16_012865	PF01551	Peptidase family M23
A9R16_012875	PF03331	UDP-3-O-acyl N-acetylglycosamine deacetylase
A9R16_012880	PF12327	FtsZ family, C-terminal domain
A9R16_012880	PF00091	Tubulin/FtsZ family, GTPase domain
A9R16_012885	PF02491	SHS2 domain inserted in FTSA
A9R16_012895	PF07478	D-ala D-ala ligase C-terminus
A9R16_012895	PF01820	D-ala D-ala ligase N-terminus
A9R16_012900	PF01565	FAD binding domain 
A9R16_012900	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
A9R16_012905	PF01225	Mur ligase family, catalytic domain
A9R16_012905	PF02875	Mur ligase family, glutamate ligase domain
A9R16_012905	PF08245	Mur ligase middle domain
A9R16_012910	PF03033	Glycosyltransferase family 28 N-terminal domain
A9R16_012910	PF04101	Glycosyltransferase family 28 C-terminal domain
A9R16_012915	PF01098	Cell cycle protein
A9R16_012920	PF08245	Mur ligase middle domain
A9R16_012920	PF02875	Mur ligase family, glutamate ligase domain
A9R16_012925	PF00953	Glycosyl transferase family 4
A9R16_012925	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
A9R16_012930	PF01225	Mur ligase family, catalytic domain
A9R16_012930	PF02875	Mur ligase family, glutamate ligase domain
A9R16_012930	PF08245	Mur ligase middle domain
A9R16_012935	PF08245	Mur ligase middle domain
A9R16_012935	PF02875	Mur ligase family, glutamate ligase domain
A9R16_012935	PF01225	Mur ligase family, catalytic domain
A9R16_012940	PF00905	Penicillin binding protein transpeptidase domain
A9R16_012940	PF03717	Penicillin-binding Protein dimerisation domain
A9R16_012950	PF01795	MraW methylase family
A9R16_012955	PF02381	MraZ protein, putative antitoxin-like
A9R16_012960	PF00881	Nitroreductase family
A9R16_012965	PF01638	HxlR-like helix-turn-helix
A9R16_012985	PF00923	Transaldolase/Fructose-6-phosphate aldolase
A9R16_012990	PF00563	EAL domain
A9R16_012990	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_012990	PF13188	PAS domain
A9R16_012990	PF03707	Bacterial signalling protein N terminal repeat
A9R16_013000	PF07690	Major Facilitator Superfamily
A9R16_013005	PF03952	Enolase, N-terminal domain
A9R16_013005	PF00113	Enolase, C-terminal TIM barrel domain
A9R16_013015	PF02167	Cytochrome C1 family
A9R16_013020	PF00032	Cytochrome b(C-terminal)/b6/petD
A9R16_013020	PF00033	Cytochrome b/b6/petB
A9R16_013025	PF00355	Rieske [2Fe-2S] domain
A9R16_013025	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
A9R16_013035	PF00034	Cytochrome c
A9R16_013040	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
A9R16_013050	PF13580	SIS domain
A9R16_013055	PF04972	BON domain
A9R16_013060	PF01467	Cytidylyltransferase-like
A9R16_013065	PF01565	FAD binding domain 
A9R16_013065	PF02913	FAD linked oxidases, C-terminal domain
A9R16_013085	PF04386	Stringent starvation protein B
A9R16_013090	PF00043	Glutathione S-transferase, C-terminal domain
A9R16_013090	PF02798	Glutathione S-transferase, N-terminal domain
A9R16_013095	PF00595	PDZ domain
A9R16_013105	PF13439	Glycosyltransferase Family 4
A9R16_013105	PF00534	Glycosyl transferases group 1
A9R16_013110	PF00083	Sugar (and other) transporter
A9R16_013115	PF00902	Sec-independent protein translocase protein (TatC)
A9R16_013120	PF02416	mttA/Hcf106 family
A9R16_013125	PF02416	mttA/Hcf106 family
A9R16_013135	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
A9R16_013140	PF01502	Phosphoribosyl-AMP cyclohydrolase
A9R16_013145	PF00977	Histidine biosynthesis protein
A9R16_013150	PF00977	Histidine biosynthesis protein
A9R16_013155	PF00117	Glutamine amidotransferase class-I
A9R16_013160	PF00475	Imidazoleglycerol-phosphate dehydratase
A9R16_013165	PF00155	Aminotransferase class I and II
A9R16_013170	PF00815	Histidinol dehydrogenase
A9R16_013175	PF01634	ATP phosphoribosyltransferase
A9R16_013180	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
A9R16_013185	PF00462	Glutaredoxin
A9R16_013195	PF01061	ABC-2 type transporter
A9R16_013200	PF00005	ABC transporter
A9R16_013215	PF02470	MlaD protein
A9R16_013220	PF02405	Permease MlaE
A9R16_013225	PF00005	ABC transporter
A9R16_013260	PF00296	Luciferase-like monooxygenase
A9R16_013270	PF01867	CRISPR associated protein Cas1
A9R16_013280	PF09615	CRISPR-associated protein (Cas_Csy3)
A9R16_013300	PF18019	HD domain
A9R16_013305	PF01548	Transposase
A9R16_013305	PF02371	Transposase IS116/IS110/IS902 family
A9R16_013315	PF00005	ABC transporter
A9R16_013325	PF00571	CBS domain
A9R16_013325	PF01380	SIS domain
A9R16_013335	PF01554	MatE
A9R16_013345	PF00005	ABC transporter
A9R16_013345	PF12399	Branched-chain amino acid ATP-binding cassette transporter
A9R16_013350	PF00309	Sigma-54 factor, Activator interacting domain (AID) 
A9R16_013350	PF04963	Sigma-54 factor, core binding domain
A9R16_013350	PF04552	Sigma-54, DNA binding domain
A9R16_013355	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
A9R16_013360	PF07475	HPr Serine kinase C-terminal domain
A9R16_013360	PF02603	HPr Serine kinase N terminus
A9R16_013365	PF03668	P-loop ATPase protein family
A9R16_013375	PF00381	PTS HPr component phosphorylation site
A9R16_013380	PF05524	PEP-utilising enzyme, N-terminal
A9R16_013380	PF02896	PEP-utilising enzyme, TIM barrel domain
A9R16_013380	PF00391	PEP-utilising enzyme, mobile domain
A9R16_013390	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_013390	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
A9R16_013400	PF01523	Putative modulator of DNA gyrase
A9R16_013405	PF01523	Putative modulator of DNA gyrase
A9R16_013410	PF00795	Carbon-nitrogen hydrolase
A9R16_013420	PF00575	S1 RNA binding domain
A9R16_013420	PF10150	Ribonuclease E/G family
A9R16_013425	PF02545	Maf-like protein
A9R16_013430	PF02590	Predicted SPOUT methyltransferase
A9R16_013440	PF01467	Cytidylyltransferase-like
A9R16_013445	PF00171	Aldehyde dehydrogenase family
A9R16_013460	PF00133	tRNA synthetases class I (I, L, M and V)
A9R16_013460	PF13603	Leucyl-tRNA synthetase, Domain 2
A9R16_013460	PF09334	tRNA synthetases class I (M)
A9R16_013460	PF08264	Anticodon-binding domain of tRNA
A9R16_013465	PF16123	Hydroxyacylglutathione hydrolase C-terminus
A9R16_013465	PF00753	Metallo-beta-lactamase superfamily
A9R16_013475	PF01177	Asp/Glu/Hydantoin racemase
A9R16_013480	PF00437	Type II/IV secretion system protein
A9R16_013485	PF00437	Type II/IV secretion system protein
A9R16_013490	PF14748	Pyrroline-5-carboxylate reductase dimerisation
A9R16_013490	PF03807	NADP oxidoreductase coenzyme F420-dependent
A9R16_013495	PF02325	YGGT family
A9R16_013500	PF08534	Redoxin
A9R16_013510	PF00085	Thioredoxin
A9R16_013515	PF00561	alpha/beta hydrolase fold
A9R16_013520	PF00561	alpha/beta hydrolase fold
A9R16_013520	PF07021	Methionine biosynthesis protein MetW
A9R16_013525	PF07690	Major Facilitator Superfamily
A9R16_013530	PF03372	Endonuclease/Exonuclease/phosphatase family
A9R16_013540	PF00156	Phosphoribosyl transferase domain
A9R16_013555	PF14306	PUA-like domain
A9R16_013555	PF01747	ATP-sulfurylase
A9R16_013560	PF13187	4Fe-4S dicluster domain
A9R16_013560	PF12139	Adenosine-5'-phosphosulfate reductase beta subunit
A9R16_013565	PF00890	FAD binding domain
A9R16_013575	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_013575	PF03707	Bacterial signalling protein N terminal repeat
A9R16_013575	PF00563	EAL domain
A9R16_013590	PF00034	Cytochrome c
A9R16_013590	PF03150	Di-haem cytochrome c peroxidase
A9R16_013595	PF04891	NifQ
A9R16_013600	PF12838	4Fe-4S dicluster domain
A9R16_013605	PF05082	Rop-like
A9R16_013610	PF03270	Protein of unknown function, DUF269
A9R16_013615	PF02579	Dinitrogenase iron-molybdenum cofactor
A9R16_013620	PF00148	Nitrogenase component 1 type Oxidoreductase
A9R16_013625	PF00148	Nitrogenase component 1 type Oxidoreductase
A9R16_013625	PF04324	BFD-like [2Fe-2S] binding domain
A9R16_013630	PF00111	2Fe-2S iron-sulfur cluster binding domain
A9R16_013635	PF11844	Domain of unknown function (DUF3364)
A9R16_013635	PF00148	Nitrogenase component 1 type Oxidoreductase
A9R16_013640	PF00148	Nitrogenase component 1 type Oxidoreductase
A9R16_013645	PF00142	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family
A9R16_013660	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
A9R16_013670	PF06988	NifT/FixU protein
A9R16_013675	PF00266	Aminotransferase class-V
A9R16_013680	PF04319	NifZ domain
A9R16_013690	PF00037	4Fe-4S binding domain
A9R16_013695	PF04055	Radical SAM superfamily
A9R16_013695	PF02579	Dinitrogenase iron-molybdenum cofactor
A9R16_013700	PF01521	Iron-sulphur cluster biosynthesis
A9R16_013705	PF03707	Bacterial signalling protein N terminal repeat
A9R16_013705	PF13188	PAS domain
A9R16_013705	PF00563	EAL domain
A9R16_013705	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_013715	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_013720	PF00766	Electron transfer flavoprotein FAD-binding domain
A9R16_013720	PF01012	Electron transfer flavoprotein domain
A9R16_013725	PF01012	Electron transfer flavoprotein domain
A9R16_013730	PF03206	Nitrogen fixation protein NifW
A9R16_013735	PF00682	HMGL-like
A9R16_013740	PF01592	NifU-like N terminal domain
A9R16_013745	PF01590	GAF domain
A9R16_013745	PF02954	Bacterial regulatory protein, Fis family
A9R16_013745	PF00158	Sigma-54 interaction domain
A9R16_013775	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_013775	PF00563	EAL domain
A9R16_013775	PF03707	Bacterial signalling protein N terminal repeat
A9R16_013810	PF00158	Sigma-54 interaction domain
A9R16_013810	PF00072	Response regulator receiver domain
A9R16_013810	PF02954	Bacterial regulatory protein, Fis family
A9R16_013845	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
A9R16_013845	PF02222	ATP-grasp domain
A9R16_013850	PF00731	AIR carboxylase
A9R16_013855	PF00176	SNF2 family N-terminal domain
A9R16_013855	PF00271	Helicase conserved C-terminal domain
A9R16_013860	PF01300	Telomere recombination
A9R16_013860	PF03481	Putative GTP-binding controlling metal-binding
A9R16_013870	PF00202	Aminotransferase class-III
A9R16_013875	PF00920	Dehydratase family
A9R16_013880	PF01979	Amidohydrolase family
A9R16_013890	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
A9R16_013895	PF01116	Fructose-bisphosphate aldolase class-II
A9R16_013900	PF03466	LysR substrate binding domain
A9R16_013900	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_013930	PF00563	EAL domain
A9R16_013930	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_013930	PF03707	Bacterial signalling protein N terminal repeat
A9R16_013950	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
A9R16_013955	PF00361	Proton-conducting membrane transporter
A9R16_013955	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
A9R16_013965	PF06463	Molybdenum Cofactor Synthesis C
A9R16_013965	PF04055	Radical SAM superfamily
A9R16_013970	PF03595	Voltage-dependent anion channel
A9R16_013985	PF09957	Bacterial antitoxin of type II TA system, VapB
A9R16_013995	PF00115	Cytochrome C and Quinol oxidase polypeptide I
A9R16_014010	PF07963	Prokaryotic N-terminal methylation motif
A9R16_014010	PF00114	Pilin (bacterial filament)
A9R16_014015	PF06965	Na+/H+ antiporter 1
A9R16_014015	PF01343	Peptidase family S49
A9R16_014035	PF08447	PAS fold
A9R16_014035	PF08448	PAS fold
A9R16_014035	PF00563	EAL domain
A9R16_014035	PF00990	Diguanylate cyclase, GGDEF domain
A9R16_014055	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
A9R16_014055	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
A9R16_014060	PF00258	Flavodoxin
A9R16_014060	PF00175	Oxidoreductase NAD-binding domain 
A9R16_014060	PF00667	FAD binding domain
A9R16_014070	PF00667	FAD binding domain
A9R16_014070	PF00258	Flavodoxin
A9R16_014070	PF00175	Oxidoreductase NAD-binding domain 
A9R16_014075	PF00009	Elongation factor Tu GTP binding domain
A9R16_014080	PF01507	Phosphoadenosine phosphosulfate reductase family
A9R16_014090	PF01507	Phosphoadenosine phosphosulfate reductase family
A9R16_014100	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
A9R16_014100	PF03466	LysR substrate binding domain
A9R16_014110	PF02167	Cytochrome C1 family
A9R16_014115	PF00032	Cytochrome b(C-terminal)/b6/petD
A9R16_014115	PF00033	Cytochrome b/b6/petB
A9R16_014120	PF10399	Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal
A9R16_014120	PF00355	Rieske [2Fe-2S] domain
A9R16_014130	PF00034	Cytochrome c
A9R16_014160	PF00528	Binding-protein-dependent transport system inner membrane component
A9R16_014165	PF00528	Binding-protein-dependent transport system inner membrane component
A9R16_014170	PF00005	ABC transporter
A9R16_014170	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A9R16_014175	PF00005	ABC transporter
A9R16_014175	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
A9R16_014185	PF13784	Fic/DOC family N-terminal
A9R16_014185	PF02661	Fic/DOC family
A9R16_014200	PF12728	Helix-turn-helix domain
A9R16_014200	PF02661	Fic/DOC family
A9R16_014215	PF00589	Phage integrase family
A9R16_014225	PF04546	Sigma-70, non-essential region
A9R16_014225	PF03979	Sigma-70 factor, region 1.1
A9R16_014225	PF00140	Sigma-70 factor, region 1.2
A9R16_014225	PF04542	Sigma-70 region 2 
A9R16_014225	PF04539	Sigma-70 region 3
A9R16_014225	PF04545	Sigma-70, region 4
A9R16_014230	PF10410	DnaB-helicase binding domain of primase
A9R16_014230	PF08278	DNA primase DnaG DnaB-binding 
A9R16_014230	PF13662	Toprim domain
A9R16_014230	PF01807	CHC2 zinc finger
A9R16_014230	PF08275	DNA primase catalytic core, N-terminal domain
A9R16_014240	PF01165	Ribosomal protein S21
A9R16_014245	PF00814	Glycoprotease family
A9R16_014250	PF02660	Glycerol-3-phosphate acyltransferase
A9R16_014255	PF02152	Dihydroneopterin aldolase
A9R16_014280	PF08406	CbbQ/NirQ/NorQ C-terminal 
A9R16_014280	PF07728	AAA domain (dynein-related subfamily)
A9R16_014285	PF01966	HD domain
A9R16_014285	PF01743	Poly A polymerase head domain
A9R16_014285	PF12627	Probable RNA and SrmB- binding site of polymerase A
A9R16_014300	PF14718	Soluble lytic murein transglycosylase L domain
A9R16_014300	PF01464	Transglycosylase SLT domain
A9R16_014305	PF00171	Aldehyde dehydrogenase family
A9R16_014315	PF17785	PUA-like domain
A9R16_014315	PF10672	S-adenosylmethionine-dependent methyltransferase
A9R16_014320	PF03190	Protein of unknown function, DUF255
A9R16_014325	PF00581	Rhodanese-like domain
A9R16_014325	PF11127	Protein of unknown function (DUF2892)
A9R16_014335	PF00294	pfkB family carbohydrate kinase
A9R16_014340	PF02347	Glycine cleavage system P-protein
A9R16_014345	PF08534	Redoxin
A9R16_014350	PF02347	Glycine cleavage system P-protein
A9R16_014355	PF01597	Glycine cleavage H-protein
A9R16_014360	PF08669	Glycine cleavage T-protein C-terminal barrel domain
A9R16_014360	PF01571	Aminomethyltransferase folate-binding domain
A9R16_014370	PF01381	Helix-turn-helix
A9R16_014385	PF00072	Response regulator receiver domain
A9R16_014385	PF02954	Bacterial regulatory protein, Fis family
A9R16_014385	PF00158	Sigma-54 interaction domain
A9R16_014410	PF18674	TarS beta-glycosyltransferase C-terminal domain 1
A9R16_014410	PF00535	Glycosyl transferase family 2
A9R16_014425	PF02350	UDP-N-acetylglucosamine 2-epimerase
A9R16_014460	PF01432	Peptidase family M3
A9R16_014465	PF01488	Shikimate / quinate 5-dehydrogenase
A9R16_014465	PF08501	Shikimate dehydrogenase substrate binding domain
A9R16_014465	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
A9R16_014475	PF00043	Glutathione S-transferase, C-terminal domain
A9R16_014475	PF13417	Glutathione S-transferase, N-terminal domain
A9R16_014480	PF01040	UbiA prenyltransferase family
A9R16_014485	PF00270	DEAD/DEAH box helicase
A9R16_014485	PF00271	Helicase conserved C-terminal domain
A9R16_014485	PF17191	RecG wedge domain
A9R16_014490	PF01042	Endoribonuclease L-PSP
A9R16_014495	PF04607	Region found in RelA / SpoT proteins
A9R16_014495	PF02824	TGS domain
A9R16_014495	PF13291	ACT domain
A9R16_014500	PF01192	RNA polymerase Rpb6 
A9R16_014505	PF00625	Guanylate kinase
A9R16_014510	PF08340	Domain of unknown function (DUF1732)
A9R16_014510	PF03755	YicC-like family, N-terminal region 
A9R16_014515	PF03793	PASTA domain
A9R16_014515	PF00069	Protein kinase domain
A9R16_014525	PF01138	3' exoribonuclease family, domain 1
A9R16_014525	PF03725	3' exoribonuclease family, domain 2
A9R16_014530	PF01725	Ham1 family
A9R16_014535	PF06969	HemN C-terminal domain
A9R16_014535	PF04055	Radical SAM superfamily
A9R16_014540	PF03653	Uncharacterised protein family (UPF0093)
A9R16_014545	PF01966	HD domain
A9R16_014545	PF11871	Domain of unknown function (DUF3391)
A9R16_014560	PF00873	AcrB/AcrD/AcrF family
A9R16_014570	PF02492	CobW/HypB/UreG, nucleotide-binding domain
A9R16_014575	PF01730	UreF
A9R16_014580	PF05194	UreE urease accessory protein, C-terminal domain
A9R16_014580	PF02814	UreE urease accessory protein, N-terminal domain
A9R16_014585	PF00449	Urease alpha-subunit, N-terminal domain
A9R16_014585	PF01979	Amidohydrolase family
A9R16_014590	PF00699	Urease beta subunit
A9R16_014595	PF00547	Urease, gamma subunit
A9R16_014600	PF01774	UreD urease accessory protein
A9R16_014610	PF00873	AcrB/AcrD/AcrF family
A9R16_014630	PF18074	Primosomal protein N C-terminal domain
A9R16_014630	PF17764	3′ DNA-binding domain (3′BD)
A9R16_014630	PF00271	Helicase conserved C-terminal domain
A9R16_014630	PF00270	DEAD/DEAH box helicase
A9R16_014630	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
A9R16_014635	PF01208	Uroporphyrinogen decarboxylase (URO-D)
A9R16_014640	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
A9R16_014640	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_014645	PF00310	Glutamine amidotransferases class-II
A9R16_014645	PF04898	Glutamate synthase central domain
A9R16_014645	PF01645	Conserved region in glutamate synthase
A9R16_014645	PF01493	GXGXG motif
A9R16_014655	PF11741	AMIN domain
A9R16_014655	PF00263	Bacterial type II and III secretion system protein
A9R16_014655	PF07660	Secretin and TonB N terminus short domain
A9R16_014655	PF03958	Bacterial type II/III secretion system short domain
A9R16_014670	PF05137	Fimbrial assembly protein (PilN)
A9R16_014675	PF11104	Type IV pilus assembly protein PilM;
A9R16_014680	PF17092	Penicillin-binding protein OB-like domain
A9R16_014680	PF00905	Penicillin binding protein transpeptidase domain
A9R16_014680	PF00912	Transglycosylase
A9R16_014690	PF03485	Arginyl tRNA synthetase N terminal domain
A9R16_014690	PF05746	DALR anticodon binding domain
A9R16_014690	PF00750	tRNA synthetases class I (R)
A9R16_014700	PF00581	Rhodanese-like domain
A9R16_014705	PF02560	Cyanate lyase C-terminal domain
A9R16_014710	PF00005	ABC transporter
A9R16_014715	PF00528	Binding-protein-dependent transport system inner membrane component
A9R16_014720	PF00005	ABC transporter
A9R16_014725	PF02954	Bacterial regulatory protein, Fis family
A9R16_014725	PF00158	Sigma-54 interaction domain
A9R16_014725	PF01590	GAF domain
A9R16_014740	PF02675	S-adenosylmethionine decarboxylase 
A9R16_014750	PF17284	Spermidine synthase tetramerisation domain
A9R16_014755	PF02867	Ribonucleotide reductase, barrel domain
A9R16_014755	PF00317	Ribonucleotide reductase, all-alpha domain
A9R16_014755	PF03477	ATP cone domain
A9R16_014760	PF00268	Ribonucleotide reductase, small chain
A9R16_014765	PF07282	Putative transposase DNA-binding domain
A9R16_014765	PF01385	Probable transposase
A9R16_014765	PF12323	Helix-turn-helix domain
A9R16_014775	PF01145	SPFH domain / Band 7 family
A9R16_014805	PF00268	Ribonucleotide reductase, small chain
A9R16_014820	PF01047	MarR family
A9R16_014840	PF00873	AcrB/AcrD/AcrF family
A9R16_014845	PF13533	Biotin-lipoyl like
A9R16_014850	PF02321	Outer membrane efflux protein
A9R16_014855	PF02798	Glutathione S-transferase, N-terminal domain
A9R16_014855	PF00043	Glutathione S-transferase, C-terminal domain
A9R16_014865	PF00528	Binding-protein-dependent transport system inner membrane component
A9R16_014870	PF03459	TOBE domain
A9R16_014870	PF10649	Protein of unknown function (DUF2478)
A9R16_014870	PF00005	ABC transporter
A9R16_014875	PF00994	Probable molybdopterin binding domain
A9R16_014880	PF03453	MoeA N-terminal region (domain I and II)
A9R16_014880	PF03454	MoeA C-terminal region (domain IV)
A9R16_014880	PF00994	Probable molybdopterin binding domain
A9R16_014885	PF12804	MobA-like NTP transferase domain
A9R16_014895	PF00893	Small Multidrug Resistance protein
A9R16_014915	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
A9R16_014915	PF00384	Molybdopterin oxidoreductase
A9R16_014915	PF01568	Molydopterin dinucleotide binding domain
A9R16_014925	PF07690	Major Facilitator Superfamily
A9R16_014945	PF00909	Ammonium Transporter Family
A9R16_014950	PF00543	Nitrogen regulatory protein P-II
A9R16_014955	PF08267	Cobalamin-independent synthase, N-terminal domain
A9R16_014955	PF01717	Cobalamin-independent synthase, Catalytic domain
A9R16_015000	PF01695	IstB-like ATP binding protein
A9R16_015005	PF00665	Integrase core domain
A9R16_015040	PF02796	Helix-turn-helix domain of resolvase
A9R16_015040	PF00665	Integrase core domain
A9R16_015045	PF01695	IstB-like ATP binding protein
A9R16_015060	PF12705	PD-(D/E)XK nuclease superfamily
A9R16_015060	PF00580	UvrD/REP helicase N-terminal domain
A9R16_015060	PF13361	UvrD-like helicase C-terminal domain
A9R16_015065	PF00817	impB/mucB/samB family
A9R16_015065	PF11799	impB/mucB/samB family C-terminal domain
A9R16_015090	PF00723	Glycosyl hydrolases family 15
A9R16_015095	PF01197	Ribosomal protein L31
A9R16_015100	PF00390	Malic enzyme, N-terminal domain
A9R16_015100	PF03949	Malic enzyme, NAD binding domain
A9R16_015110	PF05175	Methyltransferase small domain
A9R16_015120	PF00501	AMP-binding enzyme
A9R16_015125	PF00378	Enoyl-CoA hydratase/isomerase
A9R16_015125	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
A9R16_015125	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
A9R16_015130	PF02803	Thiolase, C-terminal domain
A9R16_015130	PF00108	Thiolase, N-terminal domain
A9R16_015135	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
A9R16_015135	PF02770	Acyl-CoA dehydrogenase, middle domain
A9R16_015135	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
A9R16_015155	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
A9R16_015180	PF00205	Thiamine pyrophosphate enzyme, central domain
A9R16_015180	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
A9R16_015180	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
A9R16_015195	PF08245	Mur ligase middle domain
A9R16_015195	PF02875	Mur ligase family, glutamate ligase domain
A9R16_015195	PF01225	Mur ligase family, catalytic domain
A9R16_015205	PF01612	3'-5' exonuclease
A9R16_015205	PF00570	HRDC domain
A9R16_015210	PF01926	50S ribosome-binding GTPase
A9R16_015215	PF01797	Transposase IS200 like
A9R16_015220	PF07282	Putative transposase DNA-binding domain
A9R16_015220	PF12323	Helix-turn-helix domain
A9R16_015220	PF01385	Probable transposase
A9R16_015260	PF01850	PIN domain
A9R16_015275	PF01367	5'-3' exonuclease, C-terminal SAM fold
A9R16_015275	PF01612	3'-5' exonuclease
A9R16_015275	PF00476	DNA polymerase family A
A9R16_015275	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
A9R16_015280	PF03641	Possible lysine decarboxylase
A9R16_015285	PF01636	Phosphotransferase enzyme family
A9R16_015300	PF00580	UvrD/REP helicase N-terminal domain
A9R16_015300	PF13361	UvrD-like helicase C-terminal domain
A9R16_015315	PF01906	Putative heavy-metal-binding
A9R16_015320	PF04012	PspA/IM30 family
A9R16_015345	PF13333	Integrase core domain
A9R16_015345	PF13276	HTH-like domain
A9R16_015345	PF00665	Integrase core domain
A9R16_015375	PF00005	ABC transporter
A9R16_015380	PF00528	Binding-protein-dependent transport system inner membrane component
A9R16_015395	PF07992	Pyridine nucleotide-disulphide oxidoreductase
A9R16_015400	PF00037	4Fe-4S binding domain
A9R16_015400	PF11953	Domain of unknown function (DUF3470)
A9R16_015415	PF00890	FAD binding domain
A9R16_015415	PF02910	Fumarate reductase flavoprotein C-term
A9R16_015420	PF00392	Bacterial regulatory proteins, gntR family
A9R16_015420	PF07702	UTRA domain
A9R16_015425	PF01380	SIS domain
A9R16_015430	PF00132	Bacterial transferase hexapeptide (six repeats)
A9R16_015430	PF12804	MobA-like NTP transferase domain
A9R16_015435	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
A9R16_015440	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
A9R16_015440	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
A9R16_015445	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A9R16_015445	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A9R16_015450	PF00231	ATP synthase
A9R16_015455	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
A9R16_015455	PF00306	ATP synthase alpha/beta chain, C terminal domain
A9R16_015455	PF02874	ATP synthase alpha/beta family, beta-barrel domain
A9R16_015460	PF00213	ATP synthase delta (OSCP) subunit
A9R16_015465	PF00430	ATP synthase B/B' CF(0)
A9R16_015470	PF00137	ATP synthase subunit C
A9R16_015475	PF00119	ATP synthase A chain
A9R16_015490	PF17762	HTH domain found in ParB protein
A9R16_015490	PF02195	ParB-like nuclease domain
A9R16_015495	PF13614	AAA domain
A9R16_015500	PF02527	rRNA small subunit methyltransferase G
A9R16_015505	PF01134	Glucose inhibited division protein A
A9R16_015505	PF13932	GidA associated domain
A9R16_015535	PF07726	ATPase family associated with various cellular activities (AAA)
A9R16_015535	PF17863	AAA lid domain
A9R16_015545	PF01841	Transglutaminase-like superfamily
A9R16_015545	PF11992	Domain of unknown function (DUF3488)
A9R16_015545	PF13559	Domain of unknown function (DUF4129)
A9R16_015550	PF06965	Na+/H+ antiporter 1
A9R16_015555	PF01926	50S ribosome-binding GTPase
A9R16_015555	PF12631	MnmE helical domain
A9R16_015555	PF10396	GTP-binding protein TrmE N-terminus
A9R16_015560	PF02096	60Kd inner membrane protein
A9R16_015560	PF14849	YidC periplasmic domain
A9R16_015565	PF01809	Putative membrane protein insertion efficiency factor
A9R16_015570	PF00825	Ribonuclease P
A9R16_015575	PF00468	Ribosomal protein L34
