locus-tag	class	description
SE86_00015	COG0315	cyclic pyranopterin monophosphate synthase activity
SE86_00035	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
SE86_00065	COG0277	FAD linked oxidase domain protein
SE86_00105	COG0640	Transcriptional regulator
SE86_00125	COG0417	DNA replication proofreading
SE86_00155	COG2084	Dehydrogenase
SE86_00185	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
SE86_00190	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
SE86_00220	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
SE86_00250	COG1584	GPR1 FUN34 yaaH family protein
SE86_00255	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SE86_00265	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
SE86_00270	COG1193	negative regulation of DNA recombination
SE86_00300	COG0477	Major facilitator Superfamily
SE86_00335	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
SE86_00345	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
SE86_00380	COG0393	Putative heavy-metal-binding
SE86_00445	COG1960	acyl-CoA dehydrogenase activity
SE86_00450	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SE86_00470	COG0438	transferase activity, transferring glycosyl groups
SE86_00535	COG1215	transferase activity, transferring glycosyl groups
SE86_00570	COG0604	alcohol dehydrogenase
SE86_00610	COG1454	alcohol dehydrogenase
SE86_00620	COG2414	aldehyde ferredoxin oxidoreductase
SE86_00650	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SE86_00685	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
SE86_00690	COG0010	Belongs to the arginase family
SE86_00700	COG1228	amidohydrolase
SE86_00710	COG0404	The glycine cleavage system catalyzes the degradation of glycine
SE86_00715	COG0667	Aldo Keto reductase
SE86_00720	COG0179	Fumarylacetoacetate (FAA) hydrolase
SE86_00735	COG0730	response to heat
SE86_00740	COG1028	Short-chain dehydrogenase reductase Sdr
SE86_00750	COG0438	transferase activity, transferring glycosyl groups
SE86_00770	COG2814	Major facilitator Superfamily
SE86_00800	COG0514	ATP-dependent DNA helicase (RecQ)
SE86_00825	COG4670	ketone body catabolic process
SE86_00860	COG1131	(ABC) transporter
SE86_00890	COG0183	Belongs to the thiolase family
SE86_00925	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SE86_00930	COG0163	prenyltransferase activity
SE86_00960	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
SE86_00975	COG0667	Aldo Keto reductase
SE86_01000	COG1139	Iron-sulfur cluster binding protein
SE86_01020	COG0494	nUDIX hydrolase
SE86_01025	COG4946	Tricorn protease homolog
SE86_01025	COG1506	peptidase
SE86_01025	COG0823	Involved in the tonB-independent uptake of proteins
SE86_01055	COG0529	Catalyzes the synthesis of activated sulfate
SE86_01100	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SE86_01120	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SE86_01165	COG0585	pseudouridine synthase activity
SE86_01185	COG3842	ATPase activity
SE86_01195	COG1175	transmembrane transport
SE86_01210	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SE86_01220	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
SE86_01230	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
SE86_01235	COG1144	Oxidoreductase
SE86_01240	COG0674	pyruvate-flavodoxin oxidoreductase activity
SE86_01245	COG1013	pyruvate-flavodoxin oxidoreductase activity
SE86_01250	COG0531	amino acid
SE86_01260	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
SE86_01275	COG0113	porphobilinogen synthase activity
SE86_01280	COG1213	nucleotidyl transferase
SE86_01285	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
SE86_01290	COG1881	PFAM PEBP family protein
SE86_01335	COG2235	arginine
SE86_01340	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
SE86_01355	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
SE86_01360	COG2181	nitrate reductase activity
SE86_01360	COG0247	lactate metabolic process
SE86_01380	COG0174	glutamine synthetase
SE86_01395	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
SE86_01450	COG0423	glycine-tRNA ligase activity
SE86_01465	COG0023	Translation Initiation Factor
SE86_01485	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
SE86_01520	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
SE86_01540	COG1960	acyl-CoA dehydrogenase activity
SE86_01555	COG2095	MarC family integral membrane protein
SE86_01570	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
SE86_01650	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
SE86_01665	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
SE86_01670	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
SE86_01690	COG1201	RNA secondary structure unwinding
SE86_01710	COG1047	Peptidyl-prolyl cis-trans
SE86_01720	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SE86_01720	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SE86_01725	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
SE86_01745	COG1234	tRNA 3'-trailer cleavage
SE86_01750	COG0116	Belongs to the methyltransferase superfamily
SE86_01760	COG0463	Glycosyl transferase, family 2
SE86_01805	COG0539	negative regulation of cytoplasmic translation
SE86_01850	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
SE86_01890	COG1899	peptidyl-lysine modification to peptidyl-hypusine
SE86_01910	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
SE86_01920	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
SE86_01935	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
SE86_01945	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
SE86_01990	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
SE86_02000	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
SE86_02010	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
SE86_02025	COG0215	cysteine-tRNA ligase activity
SE86_02050	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SE86_02060	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
SE86_02070	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
SE86_02075	COG0255	Belongs to the universal ribosomal protein uL29 family
SE86_02095	COG0644	oxidoreductase
SE86_02105	COG2086	electron transfer activity
SE86_02110	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
SE86_02135	COG1802	Transcriptional regulator
SE86_02180	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SE86_02205	COG1994	Peptidase M50
SE86_02225	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SE86_02235	COG0525	valine-tRNA ligase activity
SE86_02240	COG0039	L-malate dehydrogenase activity
SE86_02255	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SE86_02275	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SE86_02295	COG0630	type IV secretory pathway, VirB11 components, and related ATPases involved in Archaeal flagella biosynthesis
SE86_02325	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
SE86_02360	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
SE86_02370	COG0459	protein refolding
SE86_02375	COG0371	Dehydrogenase
SE86_02380	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
SE86_02385	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
SE86_02405	COG0183	Belongs to the thiolase family
SE86_02410	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
SE86_02415	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
SE86_02420	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SE86_02440	COG2226	methyltransferase
SE86_02460	COG1304	FMN binding
SE86_02485	COG1469	GTP cyclohydrolase I activity
SE86_02490	COG0072	phenylalanine-tRNA ligase activity
SE86_02495	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
SE86_02505	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
SE86_02530	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
SE86_02540	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
SE86_02545	COG0037	tRNA processing
SE86_02570	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
SE86_02575	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
SE86_02650	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SE86_02660	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SE86_02715	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SE86_02720	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SE86_02740	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
SE86_02745	COG0649	NAD binding
SE86_02755	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
SE86_02775	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
SE86_02790	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
SE86_02800	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
SE86_02805	COG0442	prolyl-tRNA aminoacylation
SE86_02855	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
SE86_02865	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SE86_02875	COG0504	CTP synthase activity
SE86_02895	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SE86_02915	COG0017	Asparaginyl-tRNA synthetase
SE86_02950	COG1269	ATP hydrolysis coupled proton transport
SE86_02965	COG0247	lactate metabolic process
SE86_02990	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SE86_03000	COG0551	DNA topoisomerase type I activity
SE86_03000	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SE86_03035	COG1156	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit
SE86_03040	COG1155	Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit
SE86_03060	COG1201	RNA secondary structure unwinding
SE86_03065	COG0459	protein refolding
SE86_03085	COG0024	Methionine aminopeptidase
SE86_03090	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
SE86_03095	COG0488	(ABC) transporter
SE86_03100	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
SE86_03105	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
SE86_03165	COG0017	Asparaginyl-tRNA synthetase
SE86_03210	COG0154	amidase activity
SE86_03255	COG3842	ATPase activity
SE86_03275	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
SE86_03280	COG1058	Belongs to the CinA family
SE86_03280	COG1546	Belongs to the CinA family
SE86_03290	COG1394	ATPase activity, coupled to movement of substances
SE86_03300	COG0483	inositol monophosphate 1-phosphatase activity
SE86_03340	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
SE86_03370	COG1120	ATPase activity
SE86_03375	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SE86_03385	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
SE86_03440	COG0318	PFAM AMP-dependent synthetase and ligase
SE86_03445	COG0281	malic enzyme
SE86_03460	COG1321	iron dependent repressor
SE86_03475	COG1522	sequence-specific DNA binding
SE86_03490	COG0537	adenosine 5'-monophosphoramidase activity
SE86_03495	COG0587	DNA-directed DNA polymerase activity
SE86_03525	COG1113	amino acid transport
SE86_03530	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SE86_03615	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
SE86_03625	COG2723	6-phospho-beta-galactosidase activity
SE86_03670	COG0444	Belongs to the ABC transporter superfamily
SE86_03675	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SE86_03680	COG0601	transmembrane transport
SE86_03755	COG0442	prolyl-tRNA aminoacylation
SE86_03775	COG0124	histidyl-tRNA synthetase
SE86_03810	COG1028	Short-chain dehydrogenase reductase Sdr
SE86_03815	COG1131	(ABC) transporter
SE86_03835	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SE86_03840	COG2848	UPF0210 protein
SE86_03885	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
SE86_03915	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
SE86_03930	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
SE86_03935	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SE86_03955	COG2009	succinate dehydrogenase
SE86_03965	COG0509	glycine decarboxylation via glycine cleavage system
SE86_03970	COG0312	modulator of DNA gyrase
SE86_03985	COG0471	metal ion transport
SE86_03985	COG3273	potassium ion transport
SE86_03995	COG0531	amino acid
SE86_04000	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
SE86_04015	COG1024	Enoyl-CoA hydratase
SE86_04020	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
SE86_04050	COG0493	'glutamate synthase
SE86_04105	COG0531	amino acid
SE86_04110	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SE86_04115	COG1012	belongs to the aldehyde dehydrogenase family
SE86_04150	COG3383	formate dehydrogenase (NAD+) activity
SE86_04155	COG1894	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain
SE86_04205	COG0006	proline dipeptidase activity
SE86_04230	COG0126	phosphoglycerate kinase activity
SE86_04260	COG4555	ABC transporter
SE86_04285	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SE86_04320	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
SE86_04370	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
SE86_04370	COG0574	Belongs to the PEP-utilizing enzyme family
SE86_04380	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
SE86_04385	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
SE86_04415	COG0009	L-threonylcarbamoyladenylate synthase
SE86_04440	COG0667	Aldo Keto reductase
SE86_04450	COG4948	Mandelate Racemase Muconate Lactonizing
SE86_04470	COG0284	orotidine-5'-phosphate decarboxylase activity
SE86_04475	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
SE86_04485	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
SE86_04495	COG0517	IMP dehydrogenase activity
SE86_04495	COG1125	glycine betaine transport
SE86_04515	COG0167	dihydroorotate dehydrogenase activity
SE86_04520	COG0114	fumarate hydratase activity
SE86_04565	COG0393	Putative heavy-metal-binding
SE86_04585	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
SE86_04630	COG2409	Drug exporters of the RND superfamily
SE86_04645	COG0535	radical SAM domain protein
SE86_04660	COG1309	transcriptional regulator
SE86_04675	COG0531	amino acid
SE86_04750	COG1401	restriction endodeoxyribonuclease activity
SE86_04780	COG0410	ABC transporter
SE86_04790	COG0559	Belongs to the binding-protein-dependent transport system permease family
SE86_04800	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
SE86_04825	COG0588	phosphoglycerate mutase activity
SE86_04850	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
SE86_04870	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
SE86_04895	COG1454	alcohol dehydrogenase
SE86_04920	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
SE86_04935	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SE86_04950	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
SE86_04960	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
SE86_04965	COG0420	3'-5' exonuclease activity
SE86_04970	COG0419	ATPase involved in DNA repair
SE86_04970	COG0419	ATPase involved in DNA repair
SE86_04990	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SE86_05015	COG2078	PFAM AMMECR1 domain protein
SE86_05030	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
SE86_05030	COG2870	Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose
SE86_05035	COG0251	oxidation-reduction process
SE86_05060	COG1116	anion transmembrane transporter activity
SE86_05065	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
SE86_05095	COG1573	uracil-dna glycosylase
SE86_05125	COG0126	phosphoglycerate kinase activity
SE86_05150	COG1573	uracil-dna glycosylase
SE86_05190	COG1355	regulation of microtubule-based process
SE86_05210	COG1061	Type III restriction enzyme res subunit
SE86_05230	COG0330	HflC and HflK could
SE86_05245	COG4581	dead DEAH box helicase
SE86_05295	COG0740	serine-type endopeptidase activity
SE86_05300	COG2255	four-way junction helicase activity
SE86_05305	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SE86_05310	COG0318	PFAM AMP-dependent synthetase and ligase
SE86_05315	COG4948	Mandelate Racemase Muconate Lactonizing
SE86_05340	COG0489	protein tyrosine kinase activity
SE86_05350	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
SE86_05355	COG0089	rRNA binding
SE86_05385	COG1940	carbohydrate kinase activity
SE86_05410	COG1013	pyruvate-flavodoxin oxidoreductase activity
SE86_05420	COG0372	Belongs to the citrate synthase family
SE86_05435	COG2814	Major facilitator Superfamily
SE86_05475	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
SE86_05480	COG0519	Catalyzes the synthesis of GMP from XMP
SE86_05480	COG0518	GMP synthase (glutamine-hydrolyzing) activity
SE86_05485	COG0516	GMP reductase activity
SE86_05485	COG0517	IMP dehydrogenase activity
SE86_05500	COG1175	transmembrane transport
SE86_05550	COG1575	Belongs to the MenA family. Type 1 subfamily
SE86_05565	COG1335	isochorismatase
SE86_05585	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SE86_05585	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
SE86_05630	COG0499	May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine
SE86_05635	COG0148	phosphopyruvate hydratase activity
SE86_05645	COG1324	tolerance protein
SE86_05650	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SE86_05650	COG0072	phenylalanine-tRNA ligase activity
SE86_05660	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
SE86_05675	COG0430	RNA-3'-phosphate cyclase activity
SE86_05705	COG0538	isocitrate dehydrogenase activity
SE86_05710	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
SE86_05730	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
SE86_05755	COG0444	Belongs to the ABC transporter superfamily
SE86_05775	COG1446	asparaginase
SE86_05780	COG0154	amidase activity
SE86_05785	COG0380	Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor
SE86_05790	COG0463	Glycosyl transferase, family 2
SE86_05795	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
SE86_05810	COG1254	Belongs to the acylphosphatase family
SE86_05820	COG1085	galactose-1-phosphate uridylyltransferase
SE86_05825	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
SE86_05850	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
SE86_05885	COG0531	amino acid
SE86_05890	COG1501	Belongs to the glycosyl hydrolase 31 family
SE86_05955	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SE86_05985	COG0281	malic enzyme
SE86_05990	COG1953	Uracil, thiamine, allantoin
SE86_06005	COG1175	transmembrane transport
SE86_06010	COG0395	ABC-type sugar transport system, permease component
SE86_06015	COG3842	ATPase activity
SE86_06025	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
SE86_06030	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
SE86_06035	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
SE86_06045	COG0200	Binds to the 23S rRNA
SE86_06050	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
SE86_06055	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
SE86_06065	COG0052	Belongs to the universal ribosomal protein uS2 family
SE86_06075	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
SE86_06100	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SE86_06115	COG0521	Mo-molybdopterin cofactor biosynthetic process
SE86_06120	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
SE86_06140	COG3118	belongs to the thioredoxin family
SE86_06160	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
SE86_06165	COG3808	pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for
SE86_06225	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SE86_06225	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SE86_06260	COG0446	pyridine nucleotide-disulphide oxidoreductase
SE86_06280	COG1250	3-hydroxyacyl-CoA dehydrogenase
SE86_06300	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
SE86_06335	COG1960	acyl-CoA dehydrogenase activity
SE86_06340	COG1979	alcohol dehydrogenase
SE86_06355	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
SE86_06375	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
SE86_06400	COG1013	pyruvate-flavodoxin oxidoreductase activity
SE86_06405	COG0674	pyruvate-flavodoxin oxidoreductase activity
SE86_06410	COG1144	Oxidoreductase
SE86_06435	COG1201	RNA secondary structure unwinding
SE86_06440	COG2814	Major facilitator Superfamily
SE86_06445	COG0295	cytidine deaminase activity
SE86_06470	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
SE86_06475	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SE86_06485	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SE86_06485	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SE86_06495	COG1061	Type III restriction enzyme res subunit
SE86_06500	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
SE86_06505	COG0045	succinate-CoA ligase (ADP-forming) activity
SE86_06535	COG1703	isobutyryl-CoA mutase activity
SE86_06555	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
SE86_06590	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
SE86_06595	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SE86_06600	COG0105	UTP biosynthetic process
SE86_06635	COG3635	2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
SE86_06650	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
SE86_06710	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SE86_06725	COG2239	Acts as a magnesium transporter
SE86_06840	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
SE86_06845	COG1185	polyribonucleotide nucleotidyltransferase activity
SE86_06860	COG0638	Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side-chain amino group of a substrate lysine
SE86_06895	COG0495	leucyl-tRNA aminoacylation
SE86_06920	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SE86_06955	COG0467	Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction
SE86_06960	COG1812	S-adenosylmethionine synthetase (AdoMet synthetase)
SE86_06985	COG0477	Major facilitator Superfamily
SE86_06995	COG1252	NADH dehydrogenase
SE86_07035	COG0085	RNA polymerase activity
SE86_07070	COG0049	tRNA binding
SE86_07075	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
SE86_07080	COG0051	transcription antitermination factor activity, RNA binding
SE86_07090	COG1793	dna ligase
SE86_07100	COG1028	Short-chain dehydrogenase reductase Sdr
SE86_07175	COG0303	'Molybdopterin
SE86_07185	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
SE86_07190	COG0181	hydroxymethylbilane synthase activity
SE86_07195	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
SE86_07205	COG1078	dGTPase activity
SE86_07225	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SE86_07270	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
SE86_07315	COG1980	fructose-bisphosphate aldolase activity
SE86_07320	COG2022	thiamine diphosphate biosynthetic process
SE86_07330	COG1960	acyl-CoA dehydrogenase activity
SE86_07335	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
SE86_07345	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
SE86_07350	COG0444	Belongs to the ABC transporter superfamily
SE86_07355	COG4608	Belongs to the ABC transporter superfamily
SE86_07385	COG1110	DNA topoisomerase II activity
SE86_07390	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
SE86_07415	COG1160	GTP binding
SE86_07450	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
SE86_07465	COG0352	thiamine-phosphate diphosphorylase activity
SE86_07465	COG0351	phosphomethylpyrimidine kinase
SE86_07470	COG0309	Hydrogenase expression formation protein (HypE)
SE86_07475	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SE86_07500	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
SE86_07505	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
SE86_07520	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
SE86_07540	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
SE86_07565	COG0719	Fe-S assembly protein
SE86_07570	COG0396	ATPase activity
SE86_07595	COG1113	amino acid transport
SE86_07600	COG0235	Class ii aldolase
SE86_07630	COG0674	pyruvate-flavodoxin oxidoreductase activity
SE86_07630	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
SE86_07635	COG1013	pyruvate-flavodoxin oxidoreductase activity
SE86_07650	COG2414	aldehyde ferredoxin oxidoreductase
SE86_07655	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
SE86_07665	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SE86_07690	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
SE86_07720	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
SE86_07725	COG0252	asparaginase activity
SE86_07745	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
SE86_07755	COG1522	sequence-specific DNA binding