locus_tag old_locus_tag gene Name start end strand product note type ID NCBI Afer_0001 Afer_0001 Afer_0001 87 1463 + chromosomal replication initiator protein DnaA KEGG: ace:Acel_0001 chromosomal replication initiator protein DnaA~TIGRFAM: chromosomal replication initiator protein DnaA~PFAM: Chromosomal replication initiator DnaA%3B Chromosomal replication initiator DnaA domain~SMART: Chromosomal replication initiator DnaA domain%3B AAA ATPase gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0001 Afer_0002 Afer_0002 Afer_0002 1687 2787 + DNA polymerase III%2C beta subunit KEGG: rxy:Rxyl_0002 DNA polymerase III%2C beta subunit~TIGRFAM: DNA polymerase III%2C beta subunit~PFAM: DNA polymerase III beta chain~SMART: DNA polymerase III beta chain gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0002 Afer_0003 Afer_0003 Afer_0003 2796 3836 + DNA replication and repair protein RecF TIGRFAM: DNA replication and repair protein RecF~PFAM: SMC domain protein~KEGG: sth:STH4 DNA repair and genetic recombination protein gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0003 Afer_0004 Afer_0004 Afer_0004 3847 4161 + hypothetical protein gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0004 Afer_0005 Afer_0005 Afer_0005 4247 6190 + DNA gyrase%2C B subunit KEGG: ace:Acel_0005 DNA gyrase subunit B~TIGRFAM: DNA gyrase%2C B subunit~PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein%3B ATP-binding region ATPase domain protein%3B DNA gyrase subunit B domain protein%3B TOPRIM domain protein~SMART: DNA topoisomerase II%3B ATP-binding region ATPase domain protein gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0005 Afer_0006 Afer_0006 Afer_0006 6222 8672 + DNA gyrase%2C A subunit KEGG: chy:CHY_2704 DNA gyrase%2C A subunit~TIGRFAM: DNA gyrase%2C A subunit~PFAM: DNA gyrase/topoisomerase IV subunit A%3B DNA gyrase repeat beta-propeller~SMART: DNA gyrase/topoisomerase IV subunit A gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0006 Afer_0007 Afer_0007 Afer_0007 8721 9707 + hypothetical protein KEGG: glycosyl hydrolase%2C family 18%2C putative %3B K01183 chitinase gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0007 Afer_0008 Afer_0008 Afer_0008 9712 11214 + type II secretion system protein E PFAM: type II secretion system protein E~KEGG: sco:SCO4526 protein kinase gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0008 Afer_0009 Afer_0009 Afer_0009 11311 11580 + hypothetical protein gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0009 Afer_0010 Afer_0010 Afer_0010 11586 11957 + hypothetical protein gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0010 Afer_0011 Afer_0011 Afer_0011 11957 12382 + hypothetical protein KEGG: GK18624 gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0011 Afer_0012 Afer_0012 Afer_0012 12379 12861 + hypothetical protein gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0012 Afer_0013 Afer_0013 Afer_0013 12858 14492 + hypothetical protein KEGG: saq:Sare_5011 Na+/solute symporter gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0013 Afer_0014 Afer_0014 Afer_0014 14486 14986 + hypothetical protein gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0014 Afer_0015 Afer_0015 Afer_0015 14983 15468 + hypothetical protein KEGG: cak:Caul_4339 peptidase M28 gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0015 Afer_0016 Afer_0016 Afer_0016 15525 16175 + hypothetical protein KEGG: GK12395 gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0016 Afer_0017 Afer_0017 Afer_0017 16178 16954 + hypothetical protein KEGG: dvu:DVU2710 hypothetical protein gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0017 Afer_0018 Afer_0018 Afer_0018 16951 17850 + hypothetical protein gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0018 Afer_0019 Afer_0019 Afer_0019 17862 18785 + hypothetical protein KEGG: ret:RHE_CH02708 hypothetical protein gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0019 Afer_0020 Afer_0020 Afer_0020 18791 20422 - Chitinase KEGG: aau:AAur_3218 putative glycosyl hydrolase family protein~PFAM: Carbohydrate-binding family V/XII~SMART: Carbohydrate-binding family V/XII gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0020 Afer_0021 Afer_0021 Afer_0021 20600 22321 + conserved hypothetical protein KEGG: aau:AAur_3217 hypothetical protein gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0021 Afer_0022 Afer_0022 Afer_0022 22318 23706 + diguanylate phosphodiesterase PFAM: EAL domain protein~SMART: EAL domain protein~KEGG: bln:Blon_0041 hypothetical protein gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0022 Afer_0023 Afer_0023 Afer_0023 23703 25091 - polynucleotide adenylyltransferase/metal dependent phosphohydrolase TIGRFAM: tRNA adenylyltransferase%3B metal dependent phophohydrolase~PFAM: Polynucleotide adenylyltransferase region%3B metal-dependent phosphohydrolase HD sub domain~KEGG: sgr:SGR_3683 putative RNA nucleotidyltransferase gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0023 Afer_0024 Afer_0024 Afer_0024 25103 26134 - histone deacetylase superfamily PFAM: histone deacetylase superfamily~KEGG: sul:SYO3AOP1_1212 histone deacetylase superfamily gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0024 Afer_0025 Afer_0025 Afer_0025 26239 26946 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: cau:Caur_1705 GCN5-related N- acetyltransferase gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0025 Afer_0026 Afer_0026 Afer_0026 26927 28705 + hypothetical protein KEGG: GF17743 gene product from transcript GF17743- RA gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0026 Afer_0027 Afer_0027 Afer_0027 28705 30312 + integral membrane protein MviN TIGRFAM: integral membrane protein MviN~PFAM: virulence factor MVIN family protein%3B multi antimicrobial extrusion protein MatE~KEGG: fal:FRAAL6865 hypothetical protein gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0027 Afer_0028 Afer_0028 Afer_0028 30309 31151 + degV family protein TIGRFAM: degV family protein~PFAM: DegV family protein~KEGG: hau:Haur_0363 DegV family protein gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0028 Afer_0029 Afer_0029 Afer_0029 31219 31545 + hypothetical protein gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0029 Afer_0030 Afer_0030 Afer_0030 31574 32536 + thioredoxin reductase KEGG: fra:Francci3_4536 thioredoxin reductase~TIGRFAM: thioredoxin reductase~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B FAD dependent oxidoreductase gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0030 Afer_0031 Afer_0031 Afer_0031 32599 32931 + thioredoxin TIGRFAM: thioredoxin~PFAM: Thioredoxin domain~KEGG: mmi:MMAR_5478 thioredoxin TrxC gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0031 Afer_0032 Afer_0032 Afer_0032 32949 33920 + Peptidoglycan-binding domain 1 protein PFAM: Peptidoglycan-binding domain 1 protein~KEGG: ace:Acel_2150 cell wall hydrolase/autolysin gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0032 Afer_0033 Afer_0033 Afer_0033 34708 35217 + transcriptional regulator%2C XRE family PFAM: DNA polymerase beta domain protein region%3B helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: cmi:CMM_2452 Cro/CI family transcriptional regulator/nucleotidyltransferase gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0033 Afer_0034 Afer_0034 Afer_0034 35214 35567 + protein of unknown function DUF86 PFAM: protein of unknown function DUF86~KEGG: tel:tll2231 hypothetical protein gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0034 Afer_0035 Afer_0035 Afer_0035 35856 36818 - proline-specific peptidase KEGG: fjo:Fjoh_1984 proline-specific peptidase~TIGRFAM: proline-specific peptidase~PFAM: alpha/beta hydrolase fold gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0035 Afer_0036 Afer_0036 Afer_0036 36917 38089 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: cma:Cmaq_1162 major facilitator transporter gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0036 Afer_0037 Afer_0037 Afer_0037 38103 39182 - Myo-inositol-1-phosphate synthase PFAM: Myo-inositol-1-phosphate synthase%3B Myo- inositol-1-phosphate synthase GAPDH domain protein~KEGG: saq:Sare_5081 myo-inositol-1-phosphate synthase gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0037 Afer_0038 Afer_0038 Afer_0038 39269 39862 - transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: fra:Francci3_4528 PadR family transcriptional regulator gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0038 Afer_0039 Afer_0039 Afer_0039 39960 40349 + hypothetical protein KEGG: ace:Acel_2136 hypothetical protein gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0039 Afer_0040 Afer_0040 Afer_0040 40429 41328 + 3-methyl-2-oxobutanoatehydroxymethyltransferase KEGG: bja:blr2101 3-methyl-2-oxobutanoate hydroxymethyltransferase~TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase~PFAM: Ketopantoate hydroxymethyltransferase gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0040 Afer_0041 Afer_0041 Afer_0041 41325 43082 - replicative DNA helicase KEGG: cya:CYA_1550 replicative DNA helicase~TIGRFAM: replicative DNA helicase~PFAM: DnaB domain protein helicase domain protein~SMART: AAA ATPase%3B Hedgehog/intein hint domain protein gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0041 Afer_0042 Afer_0042 Afer_0042 43096 43548 - ribosomal protein L9 TIGRFAM: ribosomal protein L9~PFAM: ribosomal protein L9~KEGG: fre:Franean1_7309 ribosomal protein L9 gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0042 Afer_0043 Afer_0043 Afer_0043 43545 43952 - ribosomal protein S18 TIGRFAM: ribosomal protein S18~PFAM: ribosomal protein S18~KEGG: tfu:Tfu_3093 30S ribosomal protein S18 gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0043 Afer_0044 Afer_0044 Afer_0044 43956 44402 - single-strand binding protein TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n~KEGG: fal:FRAAL6852 single-strand DNA-binding protein gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0044 Afer_0045 Afer_0045 Afer_0045 44430 44768 - ribosomal protein S6 TIGRFAM: ribosomal protein S6~PFAM: ribosomal protein S6~KEGG: tte:TTE2781 30S ribosomal protein S6 gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0045 Afer_0046 Afer_0046 Afer_0046 44852 45481 - hypothetical protein gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0046 Afer_0047 Afer_0047 Afer_0047 45648 46052 + hypothetical protein gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0047 Afer_0048 Afer_0048 Afer_0048 46052 46750 + hypothetical protein gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0048 Afer_0049 Afer_0049 Afer_0049 46722 47768 - sodium/hydrogen exchanger PFAM: sodium/hydrogen exchanger~KEGG: ank:AnaeK_3726 sodium/hydrogen exchanger gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0049 Afer_0050 Afer_0050 Afer_0050 47864 48529 + secreted repeat of unknown function PFAM: Secreted repeat of unknown function~KEGG: ace:Acel_0027 hypothetical protein gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0050 Afer_0051 Afer_0051 Afer_0051 48548 50578 - protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein~KEGG: fre:Franean1_0238 hypothetical protein gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0051 Afer_0052 Afer_0052 Afer_0052 50613 51218 - deoxycytidine triphosphate deaminase TIGRFAM: deoxycytidine triphosphate deaminase~PFAM: deoxyUTP pyrophosphatase~KEGG: mva:Mvan_0589 deoxycytidine triphosphate deaminase gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0052 Afer_0053 Afer_0053 Afer_0053 51587 52653 - pseudogene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0053 Afer_0054 Afer_0054 Afer_0054 52830 53132 + pseudogene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0054 Afer_0055 Afer_0055 Afer_0055 53466 54029 - conserved hypothetical protein KEGG: mbb:BCG_3106 hypothetical protein gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0055 Afer_0056 Afer_0056 Afer_0056 54022 54441 - conserved hypothetical protein KEGG: fre:Franean1_6980 hypothetical protein gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0056 Afer_0057 Afer_0057 Afer_0057 54460 54594 - pseudogene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0057 Afer_0058 Afer_0058 Afer_0058 54684 54907 + pseudogene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0058 Afer_0059 Afer_0059 Afer_0059 55114 55506 - hypothetical protein gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0059 Afer_0060 Afer_0060 Afer_0060 55510 55656 - hypothetical protein gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0060 Afer_0061 Afer_0061 Afer_0061 55830 56504 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: gvi:gll0671 TetR family transcriptional regulatory protein gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0061 Afer_0062 Afer_0062 Afer_0062 56501 57106 + hypothetical protein gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0062 Afer_0063 Afer_0063 Afer_0063 57262 57585 - putative transcriptional regulator%2C GntR family gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0063 Afer_0064 Afer_0064 Afer_0064 58069 58872 - hypothetical protein KEGG: fra:Francci3_4170 hypothetical protein gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0064 Afer_0065 Afer_0065 Afer_0065 59143 60279 - glycoside hydrolase family 5 PFAM: glycoside hydrolase family 5~KEGG: hypothetical protein gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0065 Afer_0066 Afer_0066 Afer_0066 60276 60413 - hypothetical protein gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0066 Afer_0067 Afer_0067 Afer_0067 60502 60822 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0067 Afer_0068 Afer_0068 Afer_0068 60822 61691 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_5060 integrase catalytic subunit gene gene69 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0068 Afer_0069 Afer_0069 Afer_0069 61634 63103 - glycosyl transferase family protein KEGG: mva:Mvan_4862 glycosyl transferase family protein gene gene70 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0069 Afer_0070 Afer_0070 Afer_0070 63106 64401 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: mva:Mvan_4863 glycosyl transferase family protein gene gene71 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0070 Afer_0071 Afer_0071 Afer_0071 65218 68322 + hypothetical protein KEGG: fal:FRAAL5406 glycine-rich cell wall structural protein precursor (partial match) gene gene72 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0071 Afer_0072 Afer_0072 Afer_0072 68987 72292 + transcriptional activator domain protein PFAM: transcriptional activator domain~KEGG: mva:Mvan_1815 transcriptional regulator gene gene73 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0072 Afer_0073 Afer_0073 Afer_0073 72700 73662 + peptidase C60 sortase A and B PFAM: peptidase C60 sortase A and B~KEGG: met:M446_5133 peptidase C60 sortase A and B gene gene74 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0073 Afer_0074 Afer_0074 Afer_0074 74290 75141 - Patatin PFAM: Patatin~KEGG: mmi:MMAR_2150 alpha-beta hydrolase superfamily esterase gene gene75 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0074 Afer_0075 Afer_0075 Afer_0075 75157 75684 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR%3B regulatory protein Crp~SMART: regulatory protein MarR~KEGG: esi:Exig_2989 MarR family transcriptional regulator gene gene76 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0075 Afer_0076 Afer_0076 Afer_0076 75804 77180 + Pyridoxal-dependent decarboxylase PFAM: Pyridoxal-dependent decarboxylase~KEGG: fra:Francci3_0279 pyridoxal-dependent decarboxylase gene gene77 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0076 Afer_0077 Afer_0077 Afer_0077 77177 77593 + histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: pna:Pnap_4872 histidine triad (HIT) protein gene gene78 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0077 Afer_0078 Afer_0078 Afer_0078 77770 78975 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: saq:Sare_2891 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene79 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0078 Afer_0079 Afer_0079 Afer_0079 79073 79510 - CoA-binding domain protein PFAM: CoA-binding domain protein~KEGG: spe:Spro_1762 CoA-binding domain-containing protein gene gene80 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0079 Afer_0080 Afer_0080 Afer_0080 79510 80421 - D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding~KEGG: nca:Noca_1946 D-isomer specific 2-hydroxyacid dehydrogenase%2C NAD-binding gene gene81 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0080 Afer_0081 Afer_0081 Afer_0081 81088 83178 - Peptidase S53 propeptide PFAM: Peptidase S53 propeptide~KEGG: cac:CAC0625 periplasmic aspartyl protease gene gene82 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0081 Afer_0082 Afer_0082 Afer_0082 83357 84634 - Histidine--tRNA ligase PFAM: tRNA synthetase class II (G H P and S)~KEGG: cms:CMS_2457 histidyl-tRNA synthetase gene gene83 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0082 Afer_0083 Afer_0083 Afer_0083 84769 85296 + secreted repeat of unknown function PFAM: Secreted repeat of unknown function~KEGG: ace:Acel_0027 hypothetical protein gene gene84 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0083 Afer_0084 Afer_0084 Afer_0084 85398 87116 + adenine deaminase KEGG: chy:CHY_0699 adenine deaminase~TIGRFAM: adenine deaminase~PFAM: amidohydrolase%3B Amidohydrolase 3 gene gene85 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0084 Afer_0085 Afer_0085 Afer_0085 87173 88348 + acetyl-CoA acetyltransferase KEGG: rrs:RoseRS_2545 acetyl-CoA acetyltransferase~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase gene gene86 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0085 Afer_0086 Afer_0086 Afer_0086 88349 88942 + glutamine amidotransferase of anthranilate synthase TIGRFAM: glutamine amidotransferase of anthranilate synthase~PFAM: glutamine amidotransferase class-I~KEGG: mem:Memar_0072 glutamine amidotransferase of anthranilate synthase gene gene87 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0086 Afer_0087 Afer_0087 Afer_0087 89146 91083 - serine/threonine protein kinase with PASTA sensor(s) PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B PASTA domain containing protein~SMART: serine/threonine protein kinase%3B tyrosine protein kinase%3B PASTA domain containing protein~KEGG: rxy:Rxyl_0021 serine/threonine protein kinase gene gene88 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0087 Afer_0088 Afer_0088 Afer_0088 91136 92698 - serine/threonine protein kinase with PASTA sensor(s) PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B PASTA domain containing protein~SMART: serine/threonine protein kinase%3B tyrosine protein kinase%3B PASTA domain containing protein~KEGG: kra:Krad_0072 protein kinase gene gene89 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0088 Afer_0089 Afer_0089 Afer_0089 92695 94176 - penicillin-binding protein transpeptidase PFAM: penicillin-binding protein transpeptidase~KEGG: ace:Acel_0020 peptidoglycan glycosyltransferase gene gene90 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0089 Afer_0090 Afer_0090 Afer_0090 94169 95437 - protein serine/threonine phosphatase PFAM: Stage II sporulation E family protein%3B Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein~KEGG: nfa:nfa840 putative protein phosphatase gene gene91 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0090 Afer_0091 Afer_0091 Afer_0091 95437 95949 - FHA domain containing protein PFAM: Forkhead-associated protein~SMART: Forkhead-associated protein~KEGG: cef:CE0038 hypothetical protein gene gene92 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0091 Afer_0092 Afer_0092 Afer_0092 95954 96613 - FHA domain containing protein PFAM: Forkhead-associated protein~SMART: Forkhead-associated protein~KEGG: art:Arth_0026 FHA domain containing protein gene gene93 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0092 Afer_0093 Afer_0093 Afer_0093 96927 97475 + conserved hypothetical protein KEGG: sma:SAV_5828 hypothetical protein gene gene95 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0093 Afer_0094 Afer_0094 Afer_0094 97465 99531 - phenylacetic acid degradation protein paaN TIGRFAM: phenylacetic acid degradation protein paaN~PFAM: MaoC domain protein dehydratase%3B Aldehyde Dehydrogenase~KEGG: nfa:nfa21550 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase gene gene96 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0094 Afer_0095 Afer_0095 Afer_0095 100027 100710 + hypothetical protein KEGG: sai:Saci_2099 hypothetical protein gene gene98 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0095 Afer_0096 Afer_0096 Afer_0096 100769 101734 + hypothetical protein KEGG: mab:MAB_0355 ammonium transporter gene gene99 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0096 Afer_0097 Afer_0097 Afer_0097 102542 103462 - Prephenate dehydratase PFAM: prephenate dehydratase%3B amino acid-binding ACT domain protein~KEGG: ade:Adeh_1779 prephenate dehydratase gene gene101 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0097 Afer_0098 Afer_0098 Afer_0098 103515 104228 + 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase~KEGG: mrd:Mrad2831_1356 putative circadian phase modifier CpmA-like protein gene gene102 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0098 Afer_0099 Afer_0099 Afer_0099 104225 105385 + protein of unknown function DUF111 PFAM: protein of unknown function DUF111~KEGG: mem:Memar_2158 hypothetical protein gene gene103 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0099 Afer_0100 Afer_0100 Afer_0100 105406 106413 + Alpha/beta hydrolase fold-3 domain protein PFAM: Alpha/beta hydrolase fold-3 domain protein~KEGG: acr:Acry_0942 alpha/beta hydrolase domain- containing protein gene gene104 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0100 Afer_0101 Afer_0101 Afer_0101 106429 108747 - Phosphoenolpyruvate carboxylase KEGG: afe:Lferr_1558 phosphoenolpyruvate carboxylase gene gene105 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0101 Afer_0102 Afer_0102 Afer_0102 109303 111210 + DNA polymerase III%2C subunits gamma and tau KEGG: mta:Moth_0027 DNA polymerase III%2C subunits gamma and tau~TIGRFAM: DNA polymerase III%2C subunits gamma and tau~SMART: AAA ATPase gene gene108 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0102 Afer_0103 Afer_0103 Afer_0103 111207 111824 + recombination protein RecR KEGG: tfu:Tfu_0044 recombination protein RecR~TIGRFAM: recombination protein RecR~PFAM: TOPRIM domain protein%3B Zinc finger C4-type%2C RecR~SMART: Toprim sub domain protein gene gene109 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0103 Afer_0104 Afer_0104 Afer_0104 111825 112238 - methylmalonyl-CoA epimerase TIGRFAM: methylmalonyl-CoA epimerase~PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: pho:PH0272 hypothetical protein gene gene110 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0104 Afer_0105 Afer_0105 Afer_0105 112225 113619 - crotonyl-CoA reductase TIGRFAM: crotonyl-CoA reductase~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: stp:Strop_3612 crotonyl-CoA reductase gene gene111 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0105 Afer_0106 Afer_0106 Afer_0106 113765 114961 + acetyl-CoA acetyltransferase KEGG: fal:FRAAL5910 acetyl-CoA acetyltransferase~TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase gene gene112 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0106 Afer_0107 Afer_0107 Afer_0107 115009 117996 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B glycosyl transferase group 1%3B Methionine biosynthesis MetW protein%3B Methyltransferase type 12~KEGG: pcu:pc1183 putative mannosyltransferase gene gene113 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0107 Afer_0108 Afer_0108 Afer_0108 117974 118555 - peptidyl-prolyl cis-trans isomerase cyclophilin type PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~KEGG: dge:Dgeo_0070 peptidylprolyl isomerase gene gene114 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0108 Afer_0109 Afer_0109 Afer_0109 118617 119465 - peptidyl-prolyl cis-trans isomerase cyclophilin type PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type~KEGG: cya:CYA_1482 peptidylprolyl cis-trans isomerase%2C cyclophilin-type gene gene115 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0109 Afer_0110 Afer_0110 Afer_0110 119526 120847 + pseudogene gene116 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0110 Afer_0111 Afer_0111 Afer_0111 120908 122143 + aspartate kinase KEGG: kra:Krad_0463 aspartate kinase~TIGRFAM: aspartate kinase%3B aspartate kinase%2C monofunctional class~PFAM: aspartate/glutamate/uridylate kinase%3B amino acid-binding ACT domain protein gene gene117 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0111 Afer_0112 Afer_0112 Afer_0112 122140 123165 + aspartate-semialdehyde dehydrogenase KEGG: cms:CMS_0161 aspartate semialdehyde dehydrogenase~TIGRFAM: aspartate-semialdehyde dehydrogenase~PFAM: Semialdehyde dehydrogenase dimerization region%3B Semialdehyde dehydrogenase NAD - binding gene gene118 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0112 Afer_0113 Afer_0113 Afer_0113 123288 124121 + flagellin domain protein PFAM: flagellin domain protein~KEGG: sbn:Sbal195_3089 flagellin domain-containing protein gene gene119 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0113 Afer_0114 Afer_0114 Afer_0114 124213 126771 + flagellar hook-associated 2 domain protein PFAM: flagellar hook-associated 2 domain protein%3B flagellar hook-associated protein 2 domain protein~KEGG: ace:Acel_0835 flagellar hook-associated 2 domain-containing protein gene gene120 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0114 Afer_0115 Afer_0115 Afer_0115 126819 127196 + flagellar protein FliS KEGG: ace:Acel_0836 flagellar protein FliS gene gene121 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0115 Afer_0116 Afer_0116 Afer_0116 127189 127476 + hypothetical protein gene gene122 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0116 Afer_0117 Afer_0117 Afer_0117 127593 128522 + pseudogene gene123 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0117 Afer_0118 Afer_0118 Afer_0118 128605 129324 + putative ABC transporter transmembrane protein KEGG: fal:FRAAL2980 putative ABC transporter transmembrane protein gene gene124 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0118 Afer_0119 Afer_0119 Afer_0119 129677 131098 + Ribulose-bisphosphate carboxylase PFAM: ribulose bisphosphate carboxylase large chain%3B Ribulose bisphosphate carboxylase%2C large subunit- like~KEGG: afe:Lferr_1389 ribulose-bisphosphate carboxylase gene gene125 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0119 Afer_0120 Afer_0120 Afer_0120 131156 131494 + Ribulose-bisphosphate carboxylase PFAM: ribulose bisphosphate carboxylase small chain~KEGG: afe:Lferr_1388 ribulose-bisphosphate carboxylase gene gene126 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0120 Afer_0121 Afer_0121 Afer_0121 131672 133594 + carboxysome structural protein CsoS2 KEGG: afe:Lferr_1387 carboxysome structural protein CsoS2 gene gene127 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0121 Afer_0122 Afer_0122 Afer_0122 133623 135212 + carboxysome shell carbonic anhydrase TIGRFAM: carboxysome shell carbonic anhydrase~KEGG: afe:Lferr_1386 carboxysome shell carbonic anhydrase gene gene128 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0122 Afer_0123 Afer_0123 Afer_0123 135209 135460 + carboxysome peptide B TIGRFAM: carboxysome peptide B~PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml~KEGG: afe:Lferr_1385 carboxysome peptide A gene gene129 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0123 Afer_0124 Afer_0124 Afer_0124 135583 135894 + microcompartments protein PFAM: microcompartments protein~KEGG: tbd:Tbd_2645 carboxysome shell protein CsoS1A gene gene130 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0124 Afer_0125 Afer_0125 Afer_0125 135922 136233 + microcompartments protein PFAM: microcompartments protein~KEGG: tbd:Tbd_2645 carboxysome shell protein CsoS1A gene gene131 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0125 Afer_0126 Afer_0126 Afer_0126 136261 136584 + microcompartments protein PFAM: microcompartments protein~KEGG: tbd:Tbd_2645 carboxysome shell protein CsoS1A gene gene132 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0126 Afer_0127 Afer_0127 Afer_0127 136594 137049 + Ferritin Dps family protein PFAM: Ferritin Dps family protein~KEGG: afe:Lferr_1380 ferritin Dps family protein gene gene133 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0127 Afer_0128 Afer_0128 Afer_0128 137042 137302 + hypothetical protein KEGG: afe:Lferr_1379 hypothetical protein gene gene134 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0128 Afer_0129 Afer_0129 Afer_0129 137286 137939 + Cobyrinic acid ac-diamide synthase PFAM: Cobyrinic acid ac-diamide synthase~KEGG: afe:Lferr_1378 cobyrinic acid ac-diamide synthase gene gene135 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0129 Afer_0130 Afer_0130 Afer_0130 137939 138208 + hypothetical protein gene gene136 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0130 Afer_0131 Afer_0131 Afer_0131 138312 139118 + CbbQ/NirQ/NorQ domain protein PFAM: CbbQ/NirQ/NorQ domain protein%3B ATPase associated with various cellular activities AAA_5~KEGG: afe:Lferr_1376 CbbQ/NirQ/NorQ domain protein gene gene137 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0131 Afer_0132 Afer_0132 Afer_0132 139131 141476 + von Willebrand factor type A PFAM: von Willebrand factor type A~SMART: von Willebrand factor type A~KEGG: afe:Lferr_1375 von Willebrand factor type A gene gene138 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0132 Afer_0133 Afer_0133 Afer_0133 141738 145886 + NADH dehydrogenase (quinone) PFAM: NADH/Ubiquinone/plastoquinone (complex I)~KEGG: afe:Lferr_1358 hypothetical protein gene gene139 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0133 Afer_0134 Afer_0134 Afer_0134 146084 146419 + flagellar basal body rod protein PFAM: flagellar basal body rod protein~KEGG: ace:Acel_0838 flagellar basal-body rod protein gene gene140 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0134 Afer_0135 Afer_0135 Afer_0135 146420 146854 + protein of unknown function DUF1078 domain protein PFAM: protein of unknown function DUF1078 domain protein~KEGG: kra:Krad_1648 hypothetical protein gene gene141 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0135 Afer_0136 Afer_0136 Afer_0136 146851 147147 + flagellar hook-basal body complex protein FliE PFAM: flagellar hook-basal body complex protein FliE~KEGG: ace:Acel_0840 flagellar hook-basal body complex subunit FliE gene gene142 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0136 Afer_0137 Afer_0137 Afer_0137 147159 148700 + flagellar M-ring protein FliF TIGRFAM: flagellar M-ring protein FliF~PFAM: secretory protein YscJ/FliF family protein%3B Flagellar M-ring domain protein~KEGG: ace:Acel_0841 flagellar M-ring protein FliF gene gene143 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0137 Afer_0138 Afer_0138 Afer_0138 148697 149710 + flagellar motor switch protein FliG TIGRFAM: flagellar motor switch protein FliG~PFAM: flagellar motor switch protein FliG~KEGG: ace:Acel_0842 flagellar motor switch protein FliG gene gene144 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0138 Afer_0139 Afer_0139 Afer_0139 149707 150327 + hypothetical protein KEGG: dau:Daud_1763 flagellar biosynthesis/type III secretory pathway protein-like protein gene gene145 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0139 Afer_0140 Afer_0140 Afer_0140 150324 151634 + ATPase%2C FliI/YscN family KEGG: ace:Acel_0844 flagellar protein export ATPase FliI~TIGRFAM: ATPase%2C FliI/YscN family~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase gene gene146 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0140 Afer_0141 Afer_0141 Afer_0141 151631 152029 + hypothetical protein KEGG: rpt:Rpal_3033 hypothetical protein gene gene147 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0141 Afer_0142 Afer_0142 Afer_0142 152026 153138 + NLP/P60 protein PFAM: NLP/P60 protein%3B Lytic transglycosylase catalytic%3B Transglycosylase domain protein~KEGG: ace:Acel_0846 lytic transglycosylase%2C catalytic gene gene148 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0142 Afer_0143 Afer_0143 Afer_0143 153107 154495 + hypothetical protein KEGG: rci:RRC32 hypothetical protein gene gene149 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0143 Afer_0144 Afer_0144 Afer_0144 154521 155000 + flagellar hook capping protein PFAM: flagellar hook capping protein~KEGG: rpc:RPC_0870 flagellar hook capping protein gene gene150 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0144 Afer_0145 Afer_0145 Afer_0145 155129 156424 + protein of unknown function DUF1078 domain protein PFAM: protein of unknown function DUF1078 domain protein%3B flagellar basal body FlaE domain protein%3B flagellar basal body rod protein~KEGG: ace:Acel_0849 hypothetical protein gene gene151 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0145 Afer_0146 Afer_0146 Afer_0146 156521 156748 + flagellar FlbD family protein PFAM: flagellar FlbD family protein~KEGG: dsy:DSY2984 hypothetical protein gene gene152 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0146 Afer_0147 Afer_0147 Afer_0147 156752 157555 + MotA/TolQ/ExbB proton channel PFAM: MotA/TolQ/ExbB proton channel~KEGG: ace:Acel_0851 MotA/TolQ/ExbB proton channel gene gene153 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0147 Afer_0148 Afer_0148 Afer_0148 157557 158333 + OmpA/MotB domain protein PFAM: OmpA/MotB domain protein~KEGG: ace:Acel_0852 OmpA/MotB domain-containing protein gene gene154 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0148 Afer_0149 Afer_0149 Afer_0149 158394 158885 + flagellar basal body-associated protein FliL PFAM: flagellar basal body-associated protein FliL~KEGG: bpy:Bphyt_3776 flagellar basal body- associated protein FliL gene gene155 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0149 Afer_0150 Afer_0150 Afer_0150 158966 159874 + surface presentation of antigens (SPOA) protein PFAM: surface presentation of antigens (SPOA) protein%3B flagellar motor switch protein FliM~KEGG: ace:Acel_0854 flagellar motor switch protein FliM gene gene156 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0150 Afer_0151 Afer_0151 Afer_0151 159867 160154 + flagellar motor switch protein FliN TIGRFAM: flagellar motor switch protein FliN~PFAM: surface presentation of antigens (SPOA) protein~KEGG: ace:Acel_0855 flagellar motor switch protein FliN gene gene157 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0151 Afer_0152 Afer_0152 Afer_0152 160160 160477 + flagellar biosynthesis protein FliO PFAM: flagellar biosynthesis protein FliO~KEGG: esa:ESA_01251 flagellar biosynthesis protein FliO gene gene158 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0152 Afer_0153 Afer_0153 Afer_0153 160499 160828 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene159 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0153 Afer_0154 Afer_0154 Afer_0154 160825 161703 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: amr:AM1_A0193 integrase%2C catalytic region gene gene160 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0154 Afer_0155 Afer_0155 Afer_0155 161843 162532 + flagellar biosynthetic protein FliP KEGG: ace:Acel_0857 flagellar biosynthesis protein FliP~TIGRFAM: flagellar biosynthetic protein FliP~PFAM: type III secretion system inner membrane P protein gene gene161 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0155 Afer_0156 Afer_0156 Afer_0156 162549 162824 + flagellar biosynthetic protein FliQ TIGRFAM: flagellar biosynthetic protein FliQ~PFAM: export protein FliQ family 3~KEGG: dsy:DSY2977 hypothetical protein gene gene162 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0156 Afer_0157 Afer_0157 Afer_0157 162834 163574 + putative flagellar biosynthesis pathway protein KEGG: nca:Noca_0741 flagellar biosynthetic protein FliR gene gene163 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0157 Afer_0158 Afer_0158 Afer_0158 163577 164749 + type III secretion exporter PFAM: type III secretion exporter~KEGG: ace:Acel_0860 type III secretion exporter gene gene164 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0158 Afer_0159 Afer_0159 Afer_0159 164830 166860 + flagellar biosynthesis protein FlhA TIGRFAM: flagellar biosynthesis protein FlhA~PFAM: type III secretion FHIPEP protein~KEGG: ace:Acel_0861 flagellar biosynthesis protein FlhA gene gene165 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0159 Afer_0160 Afer_0160 Afer_0160 166832 167770 + hypothetical protein KEGG: GE25240 gene product from transcript GE25240- RA gene gene166 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0160 Afer_0161 Afer_0161 Afer_0161 167773 168042 + hypothetical protein gene gene167 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0161 Afer_0162 Afer_0162 Afer_0162 168126 168452 - Rhodanese domain protein PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: rha:RHA1_ro11237 sulfurtransferase%2C rhodanese related gene gene168 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0162 Afer_0163 Afer_0163 Afer_0163 168652 169863 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: lbf:LBF_2704 NADH dehydrogenase gene gene169 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0163 Afer_0164 Afer_0164 Afer_0164 169989 171050 + radical SAM enzyme%2C Cfr family KEGG: fal:FRAAL5776 Fe-S-cluster redox enzyme~TIGRFAM: radical SAM enzyme%2C Cfr family~PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene170 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0164 Afer_0165 Afer_0165 Afer_0165 171148 171822 + ribulose-phosphate 3-epimerase KEGG: afw:Anae109_0447 ribulose-phosphate 3- epimerase~TIGRFAM: ribulose-phosphate 3-epimerase~PFAM: ribulose-phosphate 3-epimerase gene gene171 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0165 Afer_0166 Afer_0166 Afer_0166 171819 174749 + transketolase TIGRFAM: transketolase%3B fructose-1%2C6- bisphosphatase%2C class II~PFAM: GlpX family protein%3B Transketolase domain protein%3B Transketolase central region~KEGG: ttj:TTHA0108 transketolase gene gene172 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0166 Afer_0167 Afer_0167 Afer_0167 174746 175714 + phosphoribulokinase/uridine kinase PFAM: phosphoribulokinase/uridine kinase~KEGG: gvi:glr4424 phosphoribulokinase gene gene173 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0167 Afer_0168 Afer_0168 Afer_0168 175731 176504 - MgtC/SapB transporter PFAM: MgtC/SapB transporter~KEGG: cyb:CYB_2116 MgtC family protein gene gene174 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0168 Afer_0169 Afer_0169 Afer_0169 176834 177967 + transcriptional regulator%2C LacI family KEGG: sgr:SGR_2421 LacI family transcriptional regulator~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI gene gene175 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0169 Afer_0170 Afer_0170 Afer_0170 177964 179799 + Xylan 1%2C4-beta-xylosidase PFAM: glycoside hydrolase family 39~KEGG: xca:xccb100_4166 exported xylan 1%2C4-beta- xylosidase gene gene176 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0170 Afer_0171 Afer_0171 Afer_0171 179952 181574 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: lxx:Lxx23050 ABC transporter%2C substrate binding protein gene gene177 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0171 Afer_0172 Afer_0172 Afer_0172 181635 182615 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: mxa:MXAN_6552 putative oligopeptide/dipeptide ABC transporter%2C permease protein gene gene178 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0172 Afer_0173 Afer_0173 Afer_0173 182612 183541 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: lxx:Lxx23070 ABC transporter%2C permease protein gene gene179 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0173 Afer_0174 Afer_0174 Afer_0174 183538 184509 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: reh:H16_A1303 ABC-type transporter%2C ATPase component: PepT family~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene180 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0174 Afer_0175 Afer_0175 Afer_0175 184506 185306 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mxa:MXAN_6554 oligopeptide/dipeptide ABC transporter%2C ATP-binding protein gene gene181 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0175 Afer_0176 Afer_0176 Afer_0176 185338 186249 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: bph:Bphy_1827 LysR family transcriptional regulator gene gene182 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0176 Afer_0177 Afer_0177 Afer_0177 186361 187344 + Fructose-bisphosphate aldolase PFAM: fructose-bisphosphate aldolase class-I~KEGG: ter:Tery_1687 fructose-bisphosphate aldolase gene gene183 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0177 Afer_0178 Afer_0178 Afer_0178 187378 187575 + hypothetical protein gene gene184 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0178 Afer_0179 Afer_0179 Afer_0179 187559 187810 + thiamineS protein PFAM: thiamineS protein~KEGG: afw:Anae109_1160 molybdopterin converting factor%2C subunit 1 gene gene185 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0179 Afer_0180 Afer_0180 Afer_0180 187810 188460 + two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: mva:Mvan_1358 two component LuxR family transcriptional regulator gene gene186 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0180 Afer_0181 Afer_0181 Afer_0181 188457 189623 + GAF sensor signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B GAF domain protein%3B histidine kinase dimerization and phosphoacceptor region~SMART: GAF domain protein%3B ATP-binding region ATPase domain protein~KEGG: mkm:Mkms_1071 GAF sensor signal transduction histidine kinase gene gene187 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0181 Afer_0182 Afer_0182 Afer_0182 189674 190645 + diguanylate cyclase KEGG: dge:Dgeo_2370 diguanylate cyclase~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene188 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0182 Afer_0183 Afer_0183 Afer_0183 190753 191730 + Transglycosylase domain protein PFAM: Transglycosylase domain protein~KEGG: fre:Franean1_0215 transglycosylase domain- containing protein gene gene189 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0183 Afer_0184 Afer_0184 Afer_0184 191863 192150 - conserved hypothetical protein KEGG: ace:Acel_1424 hypothetical protein gene gene190 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0184 Afer_0185 Afer_0185 Afer_0185 192153 192893 - dienelactone hydrolase PFAM: dienelactone hydrolase~KEGG: ace:Acel_1423 carboxymethylenebutenolidase gene gene191 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0185 Afer_0186 Afer_0186 Afer_0186 193043 193543 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: cvi:CV_3058 hypothetical protein gene gene192 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0186 Afer_0187 Afer_0187 Afer_0187 193553 193930 - succinate dehydrogenase subunit D KEGG: fra:Francci3_0680 succinate dehydrogenase subunit D gene gene193 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0187 Afer_0188 Afer_0188 Afer_0188 193932 194348 - succinate dehydrogenase%2C cytochrome b556 subunit TIGRFAM: succinate dehydrogenase%2C cytochrome b556 subunit~PFAM: succinate dehydrogenase cytochrome b subunit~KEGG: kra:Krad_3952 succinate dehydrogenase cytochrome b556 subunit gene gene194 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0188 Afer_0189 Afer_0189 Afer_0189 194345 194491 - hypothetical protein gene gene195 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0189 Afer_0190 Afer_0190 Afer_0190 194661 195977 - seryl-tRNA synthetase KEGG: gtn:GTNG_0013 seryl-tRNA synthetase~TIGRFAM: seryl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Seryl- tRNA synthetase%2C class IIa-like gene gene196 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0190 Afer_0191 Afer_0191 Afer_0191 196000 196917 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: tfu:Tfu_1989 ABC-type multidrug transport system ATPase componen gene gene197 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0191 Afer_0192 Afer_0192 Afer_0192 196914 197648 + ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: fre:Franean1_2079 ABC-2 type transporter gene gene198 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0192 Afer_0193 Afer_0193 Afer_0193 197694 198659 + cytochrome oxidase assembly PFAM: cytochrome oxidase assembly~KEGG: fra:Francci3_1653 cytochrome oxidase assembly gene gene199 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0193 Afer_0194 Afer_0194 Afer_0194 198714 199004 + ATP-dependent Clp protease adaptor protein ClpS PFAM: ATP-dependent Clp protease adaptor protein ClpS~KEGG: rha:RHA1_ro01441 ATP-dependent Clp protease adaptor protein ClpS gene gene200 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0194 Afer_0195 Afer_0195 Afer_0195 199001 199426 + hypothetical protein gene gene201 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0195 Afer_0196 Afer_0196 Afer_0196 199581 201668 - Peptidase S53 propeptide PFAM: Peptidase S53 propeptide~KEGG: cac:CAC0625 periplasmic aspartyl protease gene gene202 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0196 Afer_0197 Afer_0197 Afer_0197 202283 203239 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: tth:TTC1833 quinone oxidoreductase gene gene203 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0197 Afer_0198 Afer_0198 Afer_0198 203307 204533 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: tfu:Tfu_2797 D-amino-acid dehydrogenase gene gene204 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0198 Afer_0199 Afer_0199 Afer_0199 204597 205049 - ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: fra:Francci3_2661 ferric uptake regulator family protein gene gene205 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0199 Afer_0200 Afer_0200 Afer_0200 205042 205770 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: mab:MAB_4047c sensory transduction protein RegX3 gene gene206 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0200 Afer_0201 Afer_0201 Afer_0201 205760 206803 - histidine kinase KEGG: tfu:Tfu_2909 sensor histidine kinase~PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein gene gene207 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0201 Afer_0202 Afer_0202 Afer_0202 206934 207227 + conserved hypothetical protein KEGG: fra:Francci3_0038 hypothetical protein gene gene208 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0202 Afer_0203 Afer_0203 Afer_0203 207231 208286 + hypothetical protein KEGG: sgr:SGR_3918 putative integral membrane protein gene gene209 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0203 Afer_0204 Afer_0204 Afer_0204 208283 209482 + hypothetical protein KEGG: fre:Franean1_1340 hypothetical protein gene gene210 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0204 Afer_0205 Afer_0205 Afer_0205 209473 210630 + AAA ATPase SMART: AAA ATPase~KEGG: sco:SCO6878 ATP-binding protein gene gene211 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0205 Afer_0206 Afer_0206 Afer_0206 210627 211787 + putative type IV secretory pathway VirD4 protein KEGG: fre:Franean1_1381 type IV secretory pathway VirD4 protein-like protein gene gene212 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0206 Afer_0207 Afer_0207 Afer_0207 211818 212171 + hypothetical protein gene gene213 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0207 Afer_0208 Afer_0208 Afer_0208 212168 213556 + flagellar hook-associated protein FlgK TIGRFAM: flagellar hook-associated protein FlgK~PFAM: flagellar basal body rod protein%3B protein of unknown function DUF1078 domain protein~KEGG: ace:Acel_0832 flagellar hook-associated protein FlgK gene gene214 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0208 Afer_0209 Afer_0209 Afer_0209 213565 214470 + flagellar hook-associated protein 3 KEGG: ace:Acel_0831 flagellar hook-associated protein 3 gene gene215 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0209 Afer_0210 Afer_0210 Afer_0210 214508 214978 + protein of unknown function DUF180 PFAM: protein of unknown function DUF180~KEGG: tte:TTE0497 flagellar assembly protein FliW gene gene216 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0210 Afer_0211 Afer_0211 Afer_0211 215345 215587 - carbon storage regulator%2C CsrA TIGRFAM: carbon storage regulator~PFAM: carbon storage regulator~KEGG: hmo:HM1_1209 carbon storage regulator gene gene217 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0211 Afer_0212 Afer_0212 Afer_0212 215819 218005 + CheA signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein%3B CheW domain protein%3B Signal transducing histidine kinase homodimeric%3B Hpt domain protein~SMART: CheW domain protein%3B ATP-binding region ATPase domain protein%3B Hpt domain protein~KEGG: aba:Acid345_1524 CheA signal transduction histidine kinases gene gene218 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0212 Afer_0213 Afer_0213 Afer_0213 217998 218423 + CheW protein PFAM: CheW domain protein~SMART: CheW domain protein~KEGG: kra:Krad_0315 putative CheW protein gene gene219 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0213 Afer_0214 Afer_0214 Afer_0214 218420 219604 + response regulator receiver modulated CheB methylesterase KEGG: nca:Noca_3599 response regulator receiver modulated CheB methylesterase~PFAM: CheB methylesterase%3B response regulator receiver~SMART: response regulator receiver gene gene220 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0214 Afer_0215 Afer_0215 Afer_0215 219604 220488 + MCP methyltransferase%2C CheR-type KEGG: bbt:BBta_0527 MCP methyltransferase%2C CheR- type~PFAM: MCP methyltransferase CheR-type~SMART: MCP methyltransferase CheR-type gene gene221 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0215 Afer_0216 Afer_0216 Afer_0216 220475 221347 + transcriptional regulator%2C GntR family PFAM: regulatory protein GntR HTH%3B GntR domain protein~SMART: regulatory protein GntR HTH~KEGG: dau:Daud_0059 GntR family transcriptional regulator gene gene222 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0216 Afer_0217 Afer_0217 Afer_0217 221423 221791 + response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: kra:Krad_0325 response regulator receiver protein gene gene223 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0217 Afer_0218 Afer_0218 Afer_0218 221788 222276 + hypothetical protein KEGG: bvi:Bcep1808_5226 protease Do gene gene224 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0218 Afer_0219 Afer_0219 Afer_0219 222273 222773 + response regulator receiver protein KEGG: kra:Krad_0325 response regulator receiver protein gene gene225 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0219 Afer_0220 Afer_0220 Afer_0220 222773 224599 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ank:AnaeK_2521 glycosyl transferase family 2 gene gene226 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0220 Afer_0221 Afer_0221 Afer_0221 225108 225797 - peptidase S51 dipeptidase E PFAM: peptidase S51 dipeptidase E~KEGG: cbe:Cbei_0392 cyanophycinase gene gene227 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0221 Afer_0222 Afer_0222 Afer_0222 225888 226757 + 3-hydroxyacyl-CoA dehydrogenase NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: fre:Franean1_1037 3-hydroxybutyryl-CoA dehydrogenase%2C 3-hydroxyacyl-CoA dehydrogenase gene gene228 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0222 Afer_0223 Afer_0223 Afer_0223 226754 228697 + methylmalonyl-CoA mutase%2C large subunit KEGG: saq:Sare_4003 methylmalonyl-CoA mutase%2C large subunit~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: methylmalonyl-CoA mutase%3B cobalamin B12- binding domain protein gene gene229 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0223 Afer_0224 Afer_0224 Afer_0224 228734 229483 + diguanylate cyclase KEGG: xca:xccb100_3008 putative sensor protein~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene230 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0224 Afer_0225 Afer_0225 Afer_0225 229554 230066 + Shikimate kinase PFAM: shikimate kinase~KEGG: tfu:Tfu_1091 shikimate kinase gene gene231 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0225 Afer_0226 Afer_0226 Afer_0226 230035 230463 - Vitamin K epoxide reductase PFAM: Vitamin K epoxide reductase~SMART: Vitamin K epoxide reductase~KEGG: ace:Acel_2066 vitamin K epoxide reductase gene gene232 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0226 Afer_0227 Afer_0227 Afer_0227 230481 231332 - protein of unknown function DUF929 PFAM: protein of unknown function DUF929~KEGG: ace:Acel_2067 hypothetical protein gene gene233 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0227 Afer_0228 Afer_0228 Afer_0228 231475 231933 + Endoribonuclease L-PSP PFAM: Endoribonuclease L-PSP~KEGG: dau:Daud_1470 endoribonuclease L-PSP gene gene234 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0228 Afer_0229 Afer_0229 Afer_0229 231930 232835 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: sma:SAV_7066 integral membrane protein gene gene235 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0229 Afer_0230 Afer_0230 Afer_0230 232925 233539 + BioY protein PFAM: BioY protein~KEGG: saq:Sare_4638 BioY protein gene gene236 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0230 Afer_0231 Afer_0231 Afer_0231 233536 235092 + carboxyl transferase PFAM: carboxyl transferase~KEGG: rca:Rcas_4102 carboxyl transferase gene gene237 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0231 Afer_0232 Afer_0232 Afer_0232 235305 236723 + Amidase PFAM: Amidase~KEGG: mxa:MXAN_6372 6-aminohexanoate-cyclic-dimer hydrolase gene gene238 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0232 Afer_0233 Afer_0233 Afer_0233 236735 238144 + peptidase M20 PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: mxa:MXAN_0543 peptidase%2C M20 (glutamate carboxypeptidase) family gene gene239 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0233 Afer_0234 Afer_0234 Afer_0234 238129 239235 - protein of unknown function DUF59 PFAM: protein of unknown function DUF59~KEGG: nca:Noca_2935 hypothetical protein gene gene240 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0234 Afer_0235 Afer_0235 Afer_0235 239232 240014 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: maq:Maqu_3801 beta-lactamase domain- containing protein gene gene241 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0235 Afer_0236 Afer_0236 Afer_0236 240137 240607 - response regulator receiver protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: bur:Bcep18194_B3050 two component transcriptional regulator gene gene243 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0236 Afer_0237 Afer_0237 Afer_0237 240620 241681 - Anion-transporting ATPase PFAM: Anion-transporting ATPase~KEGG: rha:RHA1_ro04317 arsenate (2+)-transporting ATPase gene gene244 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0237 Afer_0238 Afer_0238 Afer_0238 241678 242529 - Anion-transporting ATPase PFAM: Anion-transporting ATPase~KEGG: ank:AnaeK_0988 chromosome partitioning-like ATPase gene gene245 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0238 Afer_0239 Afer_0239 Afer_0239 243093 243365 + transcription factor WhiB PFAM: transcription factor WhiB~KEGG: fal:FRAAL1135 WhiB family cell cycle control transcriptional regulator gene gene246 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0239 Afer_0240 Afer_0240 Afer_0240 243450 243812 + iron-sulfur cluster assembly accessory protein TIGRFAM: iron-sulfur cluster assembly accessory protein~PFAM: HesB/YadR/YfhF-family protein~KEGG: cja:CJA_0888 HesB/YadR/YfhF family protein gene gene247 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0240 Afer_0241 Afer_0241 Afer_0241 244047 244700 - putative two component transcriptional regulator%2C winged helix family PFAM: transcriptional regulator domain protein~KEGG: sma:SAV_4042 two-component system response regulator gene gene248 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0241 Afer_0242 Afer_0242 Afer_0242 244702 246045 - glutamine synthetase catalytic region PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp~KEGG: sat:SYN_01628 glutamine synthetase gene gene249 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0242 Afer_0243 Afer_0243 Afer_0243 246195 247622 + glutamine synthetase%2C type I TIGRFAM: glutamine synthetase%2C type I~PFAM: glutamine synthetase catalytic region%3B glutamine synthetase beta-Grasp~KEGG: fre:Franean1_1770 glutamine synthetase%2C type I gene gene250 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0243 Afer_0244 Afer_0244 Afer_0244 247758 248327 - conserved hypothetical protein KEGG: kra:Krad_4317 hypothetical protein gene gene251 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0244 Afer_0245 Afer_0245 Afer_0245 248321 249601 - conserved hypothetical protein KEGG: bwe:BcerKBAB4_1354 peptidase M23B gene gene252 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0245 Afer_0246 Afer_0246 Afer_0246 249903 251618 + NAD+ synthetase KEGG: rxy:Rxyl_2763 NH(3)-dependent NAD(+) synthetase~TIGRFAM: NAD+ synthetase~PFAM: NAD synthase%3B Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene253 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0246 Afer_0247 Afer_0247 Afer_0247 251615 252133 + hypothetical protein gene gene254 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0247 Afer_0248 Afer_0248 Afer_0248 252139 253152 + RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 3 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 4 domain protein~KEGG: fra:Francci3_1283 sigma 38 gene gene255 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0248 Afer_0249 Afer_0249 Afer_0249 253783 255015 + glutamyl-tRNA reductase KEGG: mxa:MXAN_2655 glutamyl-tRNA reductase~TIGRFAM: glutamyl-tRNA reductase~PFAM: Tetrapyrrole biosynthesis%2C glutamyl-tRNA reductase-like%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase%3B Shikimate/quinate 5- dehydrogenase gene gene256 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0249 Afer_0250 Afer_0250 Afer_0250 255015 255890 + porphobilinogen deaminase KEGG: ace:Acel_0237 hydroxymethylbilane synthase~TIGRFAM: porphobilinogen deaminase~PFAM: Porphobilinogen deaminase gene gene257 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0250 Afer_0251 Afer_0251 Afer_0251 255890 257362 + uroporphyrin-III C-methyltransferase TIGRFAM: uroporphyrin-III C-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase%3B Uroporphyrinogen III synthase HEM4~KEGG: sus:Acid_3181 uroporphyrinogen-III C- methyltransferase / uroporphyrinogen-III synthase gene gene258 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0251 Afer_0252 Afer_0252 Afer_0252 257373 258350 + Porphobilinogen synthase PFAM: delta-aminolevulinic acid dehydratase~KEGG: krh:KRH_08550 delta-aminolevulinic acid dehydratase gene gene259 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0252 Afer_0253 Afer_0253 Afer_0253 258338 259630 + glutamate-1-semialdehyde-2%2C1-aminomutase TIGRFAM: glutamate-1-semialdehyde-2%2C1-aminomutase~PFAM: aminotransferase class-III~KEGG: dol:Dole_1545 glutamate-1-semialdehyde-2%2C1- aminomutase gene gene260 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0253 Afer_0254 Afer_0254 Afer_0254 259662 261050 - Chloride channel core PFAM: Chloride channel core~KEGG: bvi:Bcep1808_4875 Cl-channel%2C voltage-gated family protein gene gene261 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0254 Afer_0255 Afer_0255 Afer_0255 261313 262206 - naphthoate synthase TIGRFAM: naphthoate synthase~PFAM: Enoyl-CoA hydratase/isomerase~KEGG: swd:Swoo_4886 naphthoate synthase gene gene262 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0255 Afer_0256 Afer_0256 Afer_0256 262397 263275 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: pzu:PHZ_c0307 3'%2C5'-cyclic-nucleotide phosphodiesterase gene gene263 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0256 Afer_0257 Afer_0257 Afer_0257 263394 264182 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein%3B Male sterility domain~KEGG: sru:SRU_2037 short chain dehydrogenase/reductase family oxidoreductase gene gene264 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0257 Afer_0258 Afer_0258 Afer_0258 264161 264883 - conserved hypothetical protein KEGG: cef:CE1107 hypothetical protein gene gene265 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0258 Afer_0259 Afer_0259 Afer_0259 264844 265347 - conserved hypothetical protein KEGG: kra:Krad_1834 hypothetical protein gene gene266 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0259 Afer_0260 Afer_0260 Afer_0260 265344 265967 - Phosphoglycerate mutase PFAM: Phosphoglycerate mutase~KEGG: cgt:cgR_1141 hypothetical protein gene gene267 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0260 Afer_0261 Afer_0261 Afer_0261 266046 267218 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase~KEGG: tfu:Tfu_0436 acetyl-CoA acetyltransferase gene gene268 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0261 Afer_0262 Afer_0262 Afer_0262 267215 267718 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: saq:Sare_1005 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen gene gene269 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0262 Afer_0263 Afer_0263 Afer_0263 267792 268178 + hypothetical protein gene gene270 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0263 Afer_0264 Afer_0264 Afer_0264 268205 268927 + LmbE family protein PFAM: LmbE family protein~KEGG: ace:Acel_0374 LmbE family protein gene gene271 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0264 Afer_0265 Afer_0265 Afer_0265 269215 270252 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: sma:SAV_6448 alcohol dehydrogenase gene gene272 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0265 Afer_0266 Afer_0266 Afer_0266 270316 271350 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: fre:Franean1_4232 aldo/keto reductase gene gene273 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0266 Afer_0267 Afer_0267 Afer_0267 271559 272221 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: sen:SACE_4714 6-O-methylguanine DNA methyltransferase gene gene274 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0267 Afer_0268 Afer_0268 Afer_0268 272437 272880 + hypothetical protein gene gene275 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0268 Afer_0269 Afer_0269 Afer_0269 272964 273959 + Pyridoxal-5'-phosphate-dependent protein beta subunit PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: rxy:Rxyl_0463 pyridoxal-5'-phosphate- dependent enzyme%2C beta subunit gene gene276 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0269 Afer_0270 Afer_0270 Afer_0270 273928 275808 - ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: hau:Haur_0337 ABC transporter related gene gene277 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0270 Afer_0271 Afer_0271 Afer_0271 275883 276584 + cob(II)yrinic acid a%2Cc-diamide reductase TIGRFAM: cob(II)yrinic acid a%2Cc-diamide reductase~PFAM: nitroreductase~KEGG: fal:FRAAL4424 putative reductase gene gene278 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0271 Afer_0272 Afer_0272 Afer_0272 276607 281163 - NAD-glutamate dehydrogenase PFAM: NAD-glutamate dehydrogenase~KEGG: ace:Acel_1749 glutamate dehydrogenase (NAD) gene gene279 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0272 Afer_0273 Afer_0273 Afer_0273 281358 282311 - agmatinase TIGRFAM: agmatinase~PFAM: Arginase/agmatinase/formiminoglutamase~KEGG: nca:Noca_3382 agmatinase gene gene280 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0273 Afer_0274 Afer_0274 Afer_0274 282415 283032 + transcriptional regulator%2C XRE family PFAM: Cupin 2 conserved barrel domain protein%3B helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: art:Arth_0847 transcriptional regulator%2C XRE family with cupin sensor gene gene281 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0274 Afer_0275 Afer_0275 Afer_0275 283067 283417 + hypothetical protein gene gene282 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0275 Afer_0276 Afer_0276 Afer_0276 283417 284100 + protein of unknown function DUF1614 PFAM: protein of unknown function DUF1614~KEGG: bbt:BBta_0662 hypothetical protein gene gene283 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0276 Afer_0277 Afer_0277 Afer_0277 284224 285093 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_5060 integrase catalytic subunit gene gene284 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0277 Afer_0278 Afer_0278 Afer_0278 285093 285413 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene285 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0278 Afer_0279 Afer_0279 Afer_0279 285555 286163 + conserved hypothetical protein KEGG: ace:Acel_0517 hypothetical protein gene gene286 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0279 Afer_0280 Afer_0280 Afer_0280 286409 289279 + hypothetical protein KEGG: spn:SP_1772 cell wall surface anchor family protein gene gene287 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0280 Afer_0281 Afer_0281 Afer_0281 289279 289737 + hypothetical protein KEGG: pcr:Pcryo_2115 hypothetical protein gene gene288 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0281 Afer_0282 Afer_0282 Afer_0282 290076 290981 + hypothetical protein KEGG: rha:RHA1_ro01864 mycothiol-dependent maleylpyruvate isomerase gene gene289 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0282 Afer_0283 Afer_0283 Afer_0283 291194 291706 + conserved hypothetical protein KEGG: mab:MAB_2457c hypothetical protein gene gene290 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0283 Afer_0284 Afer_0284 Afer_0284 291949 294183 - protein of unknown function DUF893 YccS/YhfK PFAM: protein of unknown function DUF893 YccS/YhfK~KEGG: sus:Acid_4391 protein of unknown function DUF893%2C YccS/YhfK gene gene292 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0284 Afer_0285 Afer_0285 Afer_0285 294180 294821 - methylated-DNA/protein-cysteinemethyltransferase TIGRFAM: methylated-DNA/protein-cysteine methyltransferase~PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding~KEGG: rha:RHA1_ro02330 methylated-DNA--[protein]- cysteine S-methyltransferase gene gene293 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0285 Afer_0286 Afer_0286 Afer_0286 295176 296579 + DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B type III restriction protein res subunit~SMART: DEAD-like helicases %3B helicase domain protein~KEGG: pac:PPA1787 ATP-dependent RNA helicase gene gene294 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0286 Afer_0287 Afer_0287 Afer_0287 296576 297271 - FMN-binding negative transcriptional regulator PFAM: Negative transcriptional regulator~KEGG: sen:SACE_2130 hypothetical protein gene gene295 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0287 Afer_0288 Afer_0288 Afer_0288 297468 298355 + conserved hypothetical protein KEGG: hypothetical protein gene gene296 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0288 Afer_0289 Afer_0289 Afer_0289 298440 299213 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: nfa:nfa50130 enoyl-CoA hydratase gene gene297 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0289 Afer_0290 Afer_0290 Afer_0290 299207 299686 - UspA domain protein PFAM: UspA domain protein~KEGG: sen:SACE_3386 putative universal stress protein gene gene298 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0290 Afer_0291 Afer_0291 Afer_0291 299691 302129 - ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC TIGRFAM: ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase%3B cation transporting ATPase domain protein~KEGG: afe:Lferr_2687 ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC gene gene299 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0291 Afer_0292 Afer_0292 Afer_0292 302140 303051 - UspA domain protein PFAM: UspA domain protein~KEGG: fal:FRAAL4243 stress-inducible protein gene gene300 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0292 Afer_0293 Afer_0293 Afer_0293 303159 304547 - pyridine nucleotide-disulphide oxidoreductase dimerization region PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase~KEGG: min:Minf_1201 pyruvate/2-oxoglutarate dehydrogenase complex%2C dihydrolipoamide dehydrogenase (E3) component or related enzyme gene gene301 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0293 Afer_0294 Afer_0294 Afer_0294 304760 305272 + ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: nfa:nfa3250 putative ferric uptake regulator gene gene302 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0294 Afer_0295 Afer_0295 Afer_0295 305260 307449 + catalase/peroxidase HPI TIGRFAM: catalase/peroxidase HPI~PFAM: Haem peroxidase~KEGG: rha:RHA1_ro05275 catalase gene gene303 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0295 Afer_0296 Afer_0296 Afer_0296 307584 308456 - protein of unknown function DUF74 PFAM: protein of unknown function DUF74~KEGG: afe:Lferr_1683 hypothetical protein gene gene304 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0296 Afer_0297 Afer_0297 Afer_0297 308548 309819 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B protein of unknown function DUF894 DitE~KEGG: sma:SAV_3894 integral membrane efflux protein gene gene305 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0297 Afer_0298 Afer_0298 Afer_0298 309951 311264 - NLP/P60 protein PFAM: NLP/P60 protein~KEGG: sgr:SGR_2734 NLP/P60 family secreted protein gene gene306 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0298 Afer_0299 Afer_0299 Afer_0299 311574 312389 + conserved hypothetical protein KEGG: cyt:cce_4767 hypothetical protein gene gene307 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0299 Afer_0300 Afer_0300 Afer_0300 312386 313198 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: mta:Moth_2298 daunorubicin resistance ABC transporter membrane protein gene gene308 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0300 Afer_0301 Afer_0301 Afer_0301 313217 314095 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: amr:AM1_A0193 integrase%2C catalytic region gene gene309 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0301 Afer_0302 Afer_0302 Afer_0302 314092 314421 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene310 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0302 Afer_0303 Afer_0303 Afer_0303 314418 314546 - hypothetical protein gene gene311 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0303 Afer_0304 Afer_0304 Afer_0304 314543 315583 - pseudogene gene312 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0304 Afer_0305 Afer_0305 Afer_0305 315670 316884 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: saq:Sare_0142 acyl-CoA dehydrogenase domain- containing protein gene gene313 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0305 Afer_0306 Afer_0306 Afer_0306 316961 318301 - cysteinyl-tRNA synthetase KEGG: hha:Hhal_0107 cysteinyl-tRNA synthetase~TIGRFAM: cysteinyl-tRNA synthetase~PFAM: Cysteinyl-tRNA synthetase class Ia %3B Cysteinyl-tRNA synthetase class Ia DALR gene gene314 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0306 Afer_0307 Afer_0307 Afer_0307 318455 321022 + aminoacyl-tRNA synthetase class Ia KEGG: tfu:Tfu_1936 valyl-tRNA synthetase gene gene315 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0307 Afer_0308 Afer_0308 Afer_0308 321048 322394 + metal ion transporter%2C nramp family protein KEGG: mav:MAV_4571 metal ion transporter%2C nramp family protein gene gene316 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0308 Afer_0309 Afer_0309 Afer_0309 322410 322790 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: tpe:Tpen_0466 regulatory protein%2C ArsR gene gene317 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0309 Afer_0310 Afer_0310 Afer_0310 322801 324747 - von Willebrand factor type A SMART: von Willebrand factor type A~KEGG: kra:Krad_1094 von Willebrand factor type A gene gene318 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0310 Afer_0311 Afer_0311 Afer_0311 324751 326133 - magnesium chelatase%2C ChlI subunit KEGG: fra:Francci3_3905 magnesium chelatase%2C ChlI subunit gene gene319 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0311 Afer_0312 Afer_0312 Afer_0312 326198 327955 + succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit KEGG: sgr:SGR_2689 putative succinate dehydrogenase flavoprotein subunit~TIGRFAM: succinate dehydrogenase or fumarate reductase%2C flavoprotein subunit%3B succinate dehydrogenase%2C flavoprotein subunit~PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein%3B FAD dependent oxidoreductase gene gene320 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0312 Afer_0313 Afer_0313 Afer_0313 327955 328701 + succinate dehydrogenase and fumarate reductase iron-sulfur protein TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein~KEGG: fal:FRAAL1187 succinate dehydrogenase iron- sulfur subunit gene gene321 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0313 Afer_0314 Afer_0314 Afer_0314 328676 328951 + hypothetical protein gene gene322 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0314 Afer_0315 Afer_0315 Afer_0315 328955 329557 + hypothetical protein KEGG: mva:Mvan_0765 hypothetical protein gene gene323 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0315 Afer_0316 Afer_0316 Afer_0316 329629 329844 + hypothetical protein gene gene324 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0316 Afer_0317 Afer_0317 Afer_0317 329951 330334 + transcription factor WhiB PFAM: transcription factor WhiB~KEGG: ace:Acel_0457 transcription factor WhiB gene gene325 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0317 Afer_0318 Afer_0318 Afer_0318 330385 330873 + cobalamin B12-binding domain protein PFAM: cobalamin B12-binding domain protein~KEGG: sgr:SGR_2730 putative isobutyryl-CoA mutase%2C chain B gene gene326 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0318 Afer_0319 Afer_0319 Afer_0319 330876 332024 + succinyl-CoA synthetase%2C beta subunit KEGG: rxy:Rxyl_1276 succinyl-CoA synthetase (ADP- forming) beta subunit~TIGRFAM: succinyl-CoA synthetase%2C beta subunit~PFAM: ATP-grasp domain protein%3B ATP-citrate lyase/succinyl-CoA ligase gene gene327 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0319 Afer_0320 Afer_0320 Afer_0320 332021 332908 + succinyl-CoA synthetase%2C alpha subunit TIGRFAM: succinyl-CoA synthetase%2C alpha subunit~PFAM: ATP-citrate lyase/succinyl-CoA ligase%3B CoA- binding domain protein~KEGG: afw:Anae109_3723 succinyl-CoA synthetase%2C alpha subunit gene gene328 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0320 Afer_0321 Afer_0321 Afer_0321 332934 333572 + phosphoribosylglycinamide formyltransferase TIGRFAM: phosphoribosylglycinamide formyltransferase~PFAM: formyl transferase domain protein~KEGG: LOC100083317%3B similar to glycinamide ribonucleotide formyltransferase %3B K01945 phosphoribosylamine--glycine ligase gene gene329 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0321 Afer_0322 Afer_0322 Afer_0322 333557 335050 + IMP cyclohydrolase KEGG: kra:Krad_3995 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase~PFAM: AICARFT/IMPCHase bienzyme formylation region%3B MGS domain protein~SMART: AICARFT/IMPCHase bienzyme formylation region gene gene330 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0322 Afer_0323 Afer_0323 Afer_0323 335059 335928 + Methenyltetrahydrofolate cyclohydrolase PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase~KEGG: tfu:Tfu_2571 methenyltetrahydrofolate cyclohydrolase gene gene331 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0323 Afer_0324 Afer_0324 Afer_0324 335925 336779 + Methylenetetrahydrofolate reductase (NAD(P)H) PFAM: methylenetetrahydrofolate reductase~KEGG: ttj:TTHA0327 5%2C10-methylenetetrahydrofolate reductase gene gene332 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0324 Afer_0325 Afer_0325 Afer_0325 336915 338348 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: acr:Acry_3608 general substrate transporter gene gene333 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0325 Afer_0326 Afer_0326 Afer_0326 338748 339341 + hypothetical protein KEGG: nph:NP0440A homolog 3 to rad50 ATPase gene gene334 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0326 Afer_0327 Afer_0327 Afer_0327 339515 339775 - hypothetical protein gene gene335 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0327 Afer_0328 Afer_0328 Afer_0328 339913 340206 + transcription factor WhiB PFAM: transcription factor WhiB~KEGG: bad:BAD_0659 WhiB-type transcription regulator gene gene336 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0328 Afer_0329 Afer_0329 Afer_0329 340216 341022 + Formiminotransferase domain protein PFAM: Formiminotransferase domain protein~KEGG: sat:SYN_00461 glutamate formiminotransferase gene gene337 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0329 Afer_0330 Afer_0330 Afer_0330 340976 341677 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: rsa:RSal33209_1214 TetR family transcriptional regulator gene gene338 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0330 Afer_0331 Afer_0331 Afer_0331 341830 342798 + GDP-mannose 4%2C6-dehydratase TIGRFAM: GDP-mannose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase~KEGG: rrs:RoseRS_3928 GDP-mannose 4%2C6-dehydratase gene gene339 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0331 Afer_0332 Afer_0332 Afer_0332 342804 343457 + heme exporter protein CcmA KEGG: nca:Noca_1952 ABC transporter related~TIGRFAM: heme exporter protein CcmA~PFAM: ABC transporter related~SMART: AAA ATPase gene gene340 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0332 Afer_0333 Afer_0333 Afer_0333 343451 344116 + cytochrome c-type biogenesis protein CcmB PFAM: cytochrome c-type biogenesis protein CcmB%3B ABC-2 type transporter~KEGG: nca:Noca_1953 cytochrome c-type biogenesis protein CcmB gene gene341 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0333 Afer_0334 Afer_0334 Afer_0334 344120 344854 + cytochrome c assembly protein PFAM: cytochrome c assembly protein~KEGG: nca:Noca_1955 cytochrome c assembly protein gene gene342 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0334 Afer_0335 Afer_0335 Afer_0335 344851 344988 + hypothetical protein gene gene343 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0335 Afer_0336 Afer_0336 Afer_0336 344981 345469 + CcmE/CycJ protein KEGG: cak:Caul_3892 CcmE/CycJ protein gene gene344 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0336 Afer_0337 Afer_0337 Afer_0337 345466 347448 + cytochrome c assembly protein PFAM: cytochrome c assembly protein~KEGG: nca:Noca_1958 cytochrome c assembly protein gene gene345 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0337 Afer_0338 Afer_0338 Afer_0338 347441 347983 + alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: mgm:Mmc1_3503 periplasmic protein thiol-- disulphide oxidoreductase DsbE gene gene346 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0338 Afer_0339 Afer_0339 Afer_0339 347980 349065 + cytochrome C biogenesis protein PFAM: cytochrome C biogenesis protein~KEGG: eba:ebA3525 cytochrome c biogenesis protein gene gene347 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0339 Afer_0340 Afer_0340 Afer_0340 349190 349807 + oxidoreductase molybdopterin binding PFAM: oxidoreductase molybdopterin binding~KEGG: rca:Rcas_2793 oxidoreductase molybdopterin binding gene gene348 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0340 Afer_0341 Afer_0341 Afer_0341 349948 351474 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: afe:Lferr_1484 major facilitator superfamily MFS_1 gene gene349 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0341 Afer_0342 Afer_0342 Afer_0342 351648 352238 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: sco:SCO4072 LuxR family two component system response regulator gene gene350 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0342 Afer_0343 Afer_0343 Afer_0343 352229 353302 - putative signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein~KEGG: sco:SCO2307 two-component sensor kinase gene gene351 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0343 Afer_0344 Afer_0344 Afer_0344 353299 354084 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: dra:DR_A0008 hypothetical protein gene gene352 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0344 Afer_0345 Afer_0345 Afer_0345 354081 354989 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: sco:SCO2305 ABC transporter ATP-binding subunit gene gene353 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0345 Afer_0346 Afer_0346 Afer_0346 355580 356317 - putative transcriptional regulator KEGG: saq:Sare_3145 transcriptional regulator%2C TrmB gene gene354 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0346 Afer_0347 Afer_0347 Afer_0347 356412 357521 + protein of unknown function DUF59 PFAM: protein of unknown function DUF59~KEGG: sgr:SGR_2373 putative ATP-binding protein gene gene355 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0347 Afer_0348 Afer_0348 Afer_0348 357560 357793 + conserved hypothetical protein KEGG: lxx:Lxx09210 hypothetical protein gene gene356 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0348 Afer_0349 Afer_0349 Afer_0349 357806 358726 + chromosome partitioning-like ATPase KEGG: ade:Adeh_0929 chromosome partitioning-like ATPase gene gene357 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0349 Afer_0350 Afer_0350 Afer_0350 358723 359850 + ATPase involved in chromosome partitioning KEGG: fre:Franean1_0335 anion-transporting ATPase gene gene358 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0350 Afer_0351 Afer_0351 Afer_0351 359862 360728 + PHP domain protein PFAM: PHP domain protein~KEGG: tpd:Teth39_0146 HisJ family histidinol phosphate phosphatase gene gene359 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0351 Afer_0352 Afer_0352 Afer_0352 360734 362161 + signal transduction histidine kinase PFAM: histidine kinase dimerization/phosphoacceptor%3B PAS fold-4 domain protein%3B ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: ace:Acel_0559 signal transduction histidine kinase gene gene360 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0352 Afer_0353 Afer_0353 Afer_0353 362240 362995 + Electron transfer flavoprotein alpha/beta- subunit PFAM: Electron transfer flavoprotein alpha/beta- subunit~KEGG: sen:SACE_6197 electron transfer flavoprotein%2C beta subunit gene gene361 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0353 Afer_0354 Afer_0354 Afer_0354 363006 363974 + Electron transfer flavoprotein alpha subunit PFAM: Electron transfer flavoprotein alpha subunit %3B Electron transfer flavoprotein alpha/beta-subunit~KEGG: ace:Acel_0685 electron transfer flavoprotein%2C alpha subunit gene gene362 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0354 Afer_0355 Afer_0355 Afer_0355 364102 364518 - superoxide dismutase%2C Ni KEGG: ace:Acel_0566 superoxide dismutase~TIGRFAM: superoxide dismutase%2C Ni~PFAM: Superoxide dismutase Ni-type gene gene363 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0355 Afer_0356 Afer_0356 Afer_0356 365098 365262 - hypothetical protein gene gene364 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0356 Afer_0357 Afer_0357 Afer_0357 365286 366110 - pyrroline-5-carboxylate reductase KEGG: sfu:Sfum_0197 pyrroline-5-carboxylate reductase~TIGRFAM: pyrroline-5-carboxylate reductase~PFAM: NADP oxidoreductase coenzyme F420-dependent gene gene365 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0357 Afer_0358 Afer_0358 Afer_0358 366120 367337 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: kra:Krad_0890 glycosyl transferase group 1 gene gene366 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0358 Afer_0359 Afer_0359 Afer_0359 367392 367928 - conserved hypothetical protein KEGG: hypothetical protein gene gene367 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0359 Afer_0360 Afer_0360 Afer_0360 367959 370163 - amylo-alpha-1%2C6-glucosidase KEGG: npu:Npun_F1793 amylo-alpha-1%2C6-glucosidase gene gene368 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0360 Afer_0361 Afer_0361 Afer_0361 370160 371320 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: art:Arth_3461 glycosyl transferase%2C group 1 gene gene369 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0361 Afer_0362 Afer_0362 Afer_0362 371416 372726 - geranylgeranyl reductase TIGRFAM: geranylgeranyl reductase~PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: mkm:Mkms_0784 geranylgeranyl reductase gene gene370 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0362 Afer_0363 Afer_0363 Afer_0363 372882 373340 + NADH-ubiquinone/plastoquinone oxidoreductase chain 3 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3~KEGG: gbm:Gbem_3926 NADH-ubiquinone/plastoquinone oxidoreductase chain 3 gene gene371 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0363 Afer_0364 Afer_0364 Afer_0364 373342 373884 + NADH-quinone oxidoreductase%2C B subunit KEGG: ace:Acel_0268 NADH dehydrogenase subunit B~TIGRFAM: NADH-quinone oxidoreductase%2C B subunit~PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit gene gene372 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0364 Afer_0365 Afer_0365 Afer_0365 373881 374321 + NADH dehydrogenase (ubiquinone) 30 kDa subunit PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit~KEGG: aba:Acid345_1314 NADH (or F420H2) dehydrogenase%2C subunit C gene gene373 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0365 Afer_0366 Afer_0366 Afer_0366 374421 375674 + NADH dehydrogenase I%2C D subunit KEGG: fra:Francci3_0541 NADH dehydrogenase subunit D~TIGRFAM: NADH dehydrogenase I%2C D subunit~PFAM: NADH-ubiquinone oxidoreductase chain 49kDa gene gene374 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0366 Afer_0367 Afer_0367 Afer_0367 375675 376301 + NADH-quinone oxidoreductase%2C E subunit TIGRFAM: NADH-quinone oxidoreductase%2C E subunit~PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit~KEGG: msm:MSMEG_2059 NADH-quinone oxidoreductase chain E gene gene375 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0367 Afer_0368 Afer_0368 Afer_0368 376298 377596 + NADH dehydrogenase (quinone) PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit~KEGG: mxa:MXAN_1085 NADH dehydrogenase I%2C F subunit gene gene376 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0368 Afer_0369 Afer_0369 Afer_0369 377589 380090 + NADH-quinone oxidoreductase%2C chain G TIGRFAM: NADH-quinone oxidoreductase%2C chain G~PFAM: molybdopterin oxidoreductase Fe4S4 region%3B molybdopterin oxidoreductase%3B ferredoxin~KEGG: tfu:Tfu_2689 NADH dehydrogenase subunit G gene gene377 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0369 Afer_0370 Afer_0370 Afer_0370 380080 381342 + NADH dehydrogenase (quinone) PFAM: respiratory-chain NADH dehydrogenase subunit 1~KEGG: ace:Acel_0274 NADH dehydrogenase subunit H gene gene378 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0370 Afer_0371 Afer_0371 Afer_0371 381323 382012 + NADH-quinone oxidoreductase%2C chain I TIGRFAM: NADH-quinone oxidoreductase%2C chain I~PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: fre:Franean1_6086 NADH dehydrogenase subunit I gene gene379 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0371 Afer_0372 Afer_0372 Afer_0372 382009 382587 + NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6~KEGG: sen:SACE_6893 NADH dehydrogenase subunit J gene gene380 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0372 Afer_0373 Afer_0373 Afer_0373 382584 382886 + NADH-ubiquinone oxidoreductase chain 4L PFAM: NADH-ubiquinone oxidoreductase chain 4L~KEGG: rrs:RoseRS_2233 NADH-ubiquinone oxidoreductase%2C chain 4L gene gene381 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0373 Afer_0374 Afer_0374 Afer_0374 382893 384770 + proton-translocating NADH-quinone oxidoreductase%2C chain L KEGG: glo:Glov_3127 proton-translocating NADH- quinone oxidoreductase%2C chain L~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain L~PFAM: NADH/Ubiquinone/plastoquinone (complex I)%3B NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein gene gene382 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0374 Afer_0375 Afer_0375 Afer_0375 384786 386324 + proton-translocating NADH-quinone oxidoreductase%2C chain M KEGG: fre:Franean1_6082 proton-translocating NADH- quinone oxidoreductase%2C chain M~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain M~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene383 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0375 Afer_0376 Afer_0376 Afer_0376 386321 387892 + proton-translocating NADH-quinone oxidoreductase%2C chain N KEGG: rrs:RoseRS_2230 proton-translocating NADH- quinone oxidoreductase%2C chain N~TIGRFAM: proton-translocating NADH-quinone oxidoreductase%2C chain N~PFAM: NADH/Ubiquinone/plastoquinone (complex I) gene gene384 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0376 Afer_0377 Afer_0377 Afer_0377 387910 388701 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: stp:Strop_0725 short-chain dehydrogenase/reductase SDR gene gene385 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0377 Afer_0378 Afer_0378 Afer_0378 388694 391510 - protein of unknown function DUF470 PFAM: protein of unknown function DUF470%3B protein of unknown function DUF472%3B protein of unknown function DUF471~KEGG: sma:SAV_4673 hypothetical protein gene gene386 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0378 Afer_0379 Afer_0379 Afer_0379 391512 392006 - protein of unknown function DUF520 PFAM: protein of unknown function DUF520~KEGG: saq:Sare_0477 nucleotide-binding protein gene gene387 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0379 Afer_0380 Afer_0380 Afer_0380 392231 393799 + conserved hypothetical protein KEGG: sen:SACE_2172 hypothetical protein gene gene389 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0380 Afer_0381 Afer_0381 Afer_0381 393790 394542 + HhH-GPD family protein PFAM: HhH-GPD family protein~SMART: HhH-GPD family protein~KEGG: met:M446_4878 HhH-GPD family protein gene gene390 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0381 Afer_0382 Afer_0382 Afer_0382 394432 394932 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: pzu:PHZ_c2723 phosphinothricin N- acetyltransferase gene gene391 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0382 Afer_0383 Afer_0383 Afer_0383 395174 395338 + ribosomal protein L33 TIGRFAM: ribosomal protein L33~PFAM: ribosomal protein L33~KEGG: dau:Daud_0208 ribosomal protein L33 gene gene394 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0383 Afer_0384 Afer_0384 Afer_0384 395455 395994 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: scl:sce8793 ECF family RNA polymerase sigma factor gene gene395 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0384 Afer_0385 Afer_0385 Afer_0385 396162 396422 + preprotein translocase%2C SecE subunit TIGRFAM: preprotein translocase%2C SecE subunit~PFAM: protein secE/sec61-gamma protein~KEGG: nfa:nfa51170 preprotein translocase subunit SecE gene gene397 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0385 Afer_0386 Afer_0386 Afer_0386 396466 397197 + NusG antitermination factor KEGG: fre:Franean1_6062 NusG antitermination factor~TIGRFAM: transcription termination/antitermination factor NusG~PFAM: NGN domain protein~SMART: NGN domain protein%3B KOW domain protein gene gene398 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0386 Afer_0387 Afer_0387 Afer_0387 397324 397755 + ribosomal protein L11 KEGG: nca:Noca_0696 50S ribosomal protein L11P~TIGRFAM: ribosomal protein L11~PFAM: ribosomal protein L11~SMART: ribosomal protein L11 gene gene399 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0387 Afer_0388 Afer_0388 Afer_0388 397781 398506 + ribosomal protein L1 TIGRFAM: ribosomal protein L1~PFAM: ribosomal protein L1~KEGG: tfu:Tfu_2657 50S ribosomal protein L1P gene gene400 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0388 Afer_0389 Afer_0389 Afer_0389 398655 399179 + ribosomal protein L10 PFAM: ribosomal protein L10~KEGG: pac:PPA1887 50S ribosomal protein L10 gene gene401 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0389 Afer_0390 Afer_0390 Afer_0390 399213 399599 + ribosomal protein L7/L12 TIGRFAM: ribosomal protein L7/L12~PFAM: Ribosomal protein L7/L12~KEGG: fra:Francci3_0572 50S ribosomal protein L7/L12 gene gene402 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0390 Afer_0391 Afer_0391 Afer_0391 399848 403393 + DNA-directed RNA polymerase%2C beta subunit TIGRFAM: DNA-directed RNA polymerase%2C beta subunit~PFAM: RNA polymerase Rpb2 domain 6%3B RNA polymerase Rpb2 domain 7%3B RNA polymerase Rpb2 domain 3%3B RNA polymerase beta subunit~KEGG: fal:FRAAL1072 DNA-directed RNA polymerase subunit beta gene gene403 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0391 Afer_0392 Afer_0392 Afer_0392 403393 407256 + DNA-directed RNA polymerase%2C beta' subunit KEGG: ace:Acel_0300 DNA-directed RNA polymerase subunit beta'~TIGRFAM: DNA-directed RNA polymerase%2C beta' subunit~PFAM: RNA polymerase Rpb1 domain 1%3B RNA polymerase alpha subunit%3B RNA polymerase Rpb1 domain 5%3B RNA polymerase Rpb1 domain 3%3B RNA polymerase Rpb1 domain 4~SMART: RNA polymerase I subunit A domain protein gene gene404 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0392 Afer_0393 Afer_0393 Afer_0393 407427 407798 + ribosomal protein S12 TIGRFAM: ribosomal protein S12~PFAM: ribosomal protein S12/S23~KEGG: ace:Acel_0301 30S ribosomal protein S12 gene gene405 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0393 Afer_0394 Afer_0394 Afer_0394 407802 408272 + ribosomal protein S7 TIGRFAM: ribosomal protein S7~PFAM: ribosomal protein S7~KEGG: msm:MSMEG_1399 ribosomal protein S7 gene gene406 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0394 Afer_0395 Afer_0395 Afer_0395 408289 410376 + translation elongation factor G TIGRFAM: translation elongation factor G%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor G domain protein%3B elongation factor Tu domain 2 protein%3B elongation factor G domain IV~KEGG: mta:Moth_2463 elongation factor G gene gene407 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0395 Afer_0396 Afer_0396 Afer_0396 410452 411639 + translation elongation factor Tu KEGG: ace:Acel_0304 elongation factor Tu~TIGRFAM: translation elongation factor Tu%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain protein%3B elongation factor Tu domain 2 protein gene gene408 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0396 Afer_0397 Afer_0397 Afer_0397 411720 412046 + ribosomal protein S10 TIGRFAM: ribosomal protein S10~PFAM: ribosomal protein S10~KEGG: saq:Sare_4316 30S ribosomal protein S10 gene gene409 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0397 Afer_0398 Afer_0398 Afer_0398 412223 412864 + ribosomal protein L3 PFAM: ribosomal protein L3~KEGG: ace:Acel_0306 50S ribosomal protein L3P gene gene410 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0398 Afer_0399 Afer_0399 Afer_0399 412865 413509 + ribosomal protein L4/L1e PFAM: ribosomal protein L4/L1e~KEGG: saq:Sare_4314 ribosomal protein L4/L1e gene gene411 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0399 Afer_0400 Afer_0400 Afer_0400 413506 413802 + Ribosomal protein L25/L23 PFAM: Ribosomal protein L25/L23~KEGG: pac:PPA1861 50S ribosomal protein L23 gene gene412 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0400 Afer_0401 Afer_0401 Afer_0401 413806 414642 + ribosomal protein L2 TIGRFAM: ribosomal protein L2~PFAM: ribosomal protein L2~KEGG: nfa:nfa7360 50S ribosomal protein L2 gene gene413 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0401 Afer_0402 Afer_0402 Afer_0402 414646 414927 + ribosomal protein S19 TIGRFAM: ribosomal protein S19~PFAM: ribosomal protein S19/S15~KEGG: sen:SACE_6832 30S ribosomal protein S19 gene gene414 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0402 Afer_0403 Afer_0403 Afer_0403 414927 415583 + ribosomal protein L22 TIGRFAM: ribosomal protein L22~PFAM: ribosomal protein L22/L17~KEGG: mkm:Mkms_1035 50S ribosomal protein L22 gene gene415 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0403 Afer_0404 Afer_0404 Afer_0404 415587 416453 + ribosomal protein S3 KEGG: tfu:Tfu_2640 30S ribosomal protein S3~TIGRFAM: ribosomal protein S3~PFAM: ribosomal protein S3- domain protein%3B KH type 2 domain protein%3B Ribosomal protein S3 domain~SMART: KH domain protein gene gene416 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0404 Afer_0405 Afer_0405 Afer_0405 416456 416893 + ribosomal protein L16 TIGRFAM: ribosomal protein L16~PFAM: ribosomal protein L16~KEGG: rxy:Rxyl_2148 50S ribosomal protein L16 gene gene417 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0405 Afer_0406 Afer_0406 Afer_0406 416890 417126 + ribosomal protein L29 TIGRFAM: ribosomal protein L29~PFAM: ribosomal protein L29~KEGG: cak:Caul_1622 ribosomal protein L29 gene gene418 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0406 Afer_0407 Afer_0407 Afer_0407 417123 417395 + ribosomal protein S17 PFAM: ribosomal protein S17~KEGG: ace:Acel_0315 SSU ribosomal protein S17P gene gene419 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0407 Afer_0408 Afer_0408 Afer_0408 417392 417760 + ribosomal protein L14 TIGRFAM: ribosomal protein L14~PFAM: ribosomal protein L14b/L23e~KEGG: saq:Sare_4305 50S ribosomal protein L14 gene gene420 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0408 Afer_0409 Afer_0409 Afer_0409 417761 418066 + ribosomal protein L24 KEGG: chy:CHY_2298 50S ribosomal protein L24~TIGRFAM: ribosomal protein L24~PFAM: KOW domain protein~SMART: KOW domain protein gene gene421 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0409 Afer_0410 Afer_0410 Afer_0410 418066 418635 + ribosomal protein L5 PFAM: ribosomal protein L5~KEGG: fra:Francci3_0594 50S ribosomal protein L5 gene gene422 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0410 Afer_0411 Afer_0411 Afer_0411 418635 418820 + ribosomal protein S14 PFAM: ribosomal protein S14~KEGG: tfu:Tfu_2633 SSU ribosomal protein S14P gene gene423 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0411 Afer_0412 Afer_0412 Afer_0412 418833 419243 + ribosomal protein S8 PFAM: ribosomal protein S8~KEGG: cjk:jk1797 30S ribosomal protein S8 gene gene424 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0412 Afer_0413 Afer_0413 Afer_0413 419252 419791 + ribosomal protein L6 PFAM: ribosomal protein L6~KEGG: ace:Acel_0321 50S ribosomal protein L6P gene gene425 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0413 Afer_0414 Afer_0414 Afer_0414 419802 420161 + ribosomal protein L18 TIGRFAM: ribosomal protein L18~PFAM: ribosomal protein L18P/L5E~KEGG: rrs:RoseRS_1169 ribosomal protein L18 gene gene426 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0414 Afer_0415 Afer_0415 Afer_0415 420162 420713 + ribosomal protein S5 TIGRFAM: ribosomal protein S5~PFAM: Ribosomal protein S5 %3B ribosomal protein S5 domain protein~KEGG: cur:cur_0351 30S ribosomal protein S5 gene gene427 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0415 Afer_0416 Afer_0416 Afer_0416 420706 420897 + ribosomal protein L30 TIGRFAM: ribosomal protein L30~PFAM: ribosomal protein L30~KEGG: rxy:Rxyl_2137 LSU ribosomal protein L30P gene gene428 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0416 Afer_0417 Afer_0417 Afer_0417 420894 421394 + ribosomal protein L15 TIGRFAM: ribosomal protein L15~PFAM: ribosomal protein L15~KEGG: kra:Krad_0707 50S ribosomal protein L15 gene gene429 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0417 Afer_0418 Afer_0418 Afer_0418 421417 422712 + preprotein translocase%2C SecY subunit TIGRFAM: preprotein translocase%2C SecY subunit~PFAM: SecY protein~KEGG: fre:Franean1_6029 preprotein translocase subunit SecY gene gene430 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0418 Afer_0419 Afer_0419 Afer_0419 422713 423390 + adenylate kinase TIGRFAM: adenylate kinase~PFAM: adenylate kinase%3B adenylate kinase lid domain protein~KEGG: mta:Moth_2439 adenylate kinase gene gene431 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0419 Afer_0420 Afer_0420 Afer_0420 423387 424142 + methionine aminopeptidase%2C type I TIGRFAM: methionine aminopeptidase%2C type I~PFAM: peptidase M24~KEGG: sma:SAV_4948 methionine aminopeptidase gene gene432 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0420 Afer_0421 Afer_0421 Afer_0421 424236 424460 + translation initiation factor IF-1 KEGG: bha:BH0158 translation initiation factor IF-1~TIGRFAM: translation initiation factor IF-1~PFAM: S1 IF1 family protein~SMART: RNA binding S1 domain protein gene gene433 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0421 Afer_0422 Afer_0422 Afer_0422 424535 424648 + ribosomal protein L36 TIGRFAM: ribosomal protein L36~PFAM: ribosomal protein L36~KEGG: lwe:lwe2559 50S ribosomal protein L36 gene gene434 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0422 Afer_0423 Afer_0423 Afer_0423 424652 425029 + ribosomal protein S13 PFAM: ribosomal protein S13~KEGG: ace:Acel_0331 30S ribosomal protein S13 gene gene435 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0423 Afer_0424 Afer_0424 Afer_0424 425195 425593 + ribosomal protein S11 PFAM: ribosomal protein S11%3B ribosomal protein L18P/L5E~KEGG: tte:TTE2265 30S ribosomal protein S11 gene gene436 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0424 Afer_0425 Afer_0425 Afer_0425 425594 426220 + ribosomal protein S4 KEGG: sth:STH3048 30S ribosomal protein S4~TIGRFAM: ribosomal protein S4~PFAM: ribosomal protein S4%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene437 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0425 Afer_0426 Afer_0426 Afer_0426 426272 427210 + DNA-directed RNA polymerase%2C alpha subunit KEGG: mjl:Mjls_1142 DNA-directed RNA polymerase subunit alpha~TIGRFAM: DNA-directed RNA polymerase%2C alpha subunit~PFAM: RNA polymerase insert%3B RNA polymerase alpha subunit domain protein%3B RNA polymerase dimerization~SMART: RNA polymerase RpoA/D/Rpb3-type gene gene438 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0426 Afer_0427 Afer_0427 Afer_0427 427212 427568 + ribosomal protein L17 TIGRFAM: ribosomal protein L17~PFAM: ribosomal protein L17~KEGG: sma:SAV_4954 50S ribosomal protein L17 gene gene439 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0427 Afer_0428 Afer_0428 Afer_0428 427642 428526 + tRNA pseudouridine synthase PFAM: tRNA pseudouridine synthase~KEGG: tfu:Tfu_2616 tRNA pseudouridine synthase A gene gene440 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0428 Afer_0429 Afer_0429 Afer_0429 428721 429185 + ribosomal protein L13 TIGRFAM: ribosomal protein L13~PFAM: ribosomal protein L13~KEGG: sen:SACE_6781 50S ribosomal protein L13 gene gene441 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0429 Afer_0430 Afer_0430 Afer_0430 429182 429574 + ribosomal protein S9 PFAM: ribosomal protein S9~KEGG: bsu:BSU01500 30S ribosomal protein S9 gene gene442 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0430 Afer_0431 Afer_0431 Afer_0431 429574 430902 + phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase %3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II~KEGG: dau:Daud_0359 phosphoglucosamine mutase gene gene443 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0431 Afer_0432 Afer_0432 Afer_0432 430963 432804 + glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase%2C isomerizing~PFAM: sugar isomerase (SIS)%3B glutamine amidotransferase class-II~KEGG: tfu:Tfu_2611 D-fructose-6-phosphate amidotransferase gene gene444 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0432 Afer_0433 Afer_0433 Afer_0433 432964 434064 - C4-dicarboxylate transporter/malic acid transport protein PFAM: C4-dicarboxylate transporter/malic acid transport protein~KEGG: rce:RC1_0015 C4-dicarboxylate transporter gene gene445 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0433 Afer_0434 Afer_0434 Afer_0434 434176 435108 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: dge:Dgeo_2840 LysR family transcriptional regulator gene gene446 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0434 Afer_0435 Afer_0435 Afer_0435 435109 435474 + holo-acyl-carrier-protein synthase TIGRFAM: holo-acyl-carrier-protein synthase~PFAM: 4'-phosphopantetheinyl transferase~KEGG: saq:Sare_4249 holo-acyl-carrier-protein synthase gene gene447 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0435 Afer_0436 Afer_0436 Afer_0436 435558 437000 + carbohydrate kinase%2C YjeF related protein TIGRFAM: carbohydrate kinase%2C YjeF related protein~PFAM: protein of unknown function UPF0031%3B YjeF- family domain protein~KEGG: ace:Acel_0345 carbohydrate kinase%2C YjeF related protein gene gene448 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0436 Afer_0437 Afer_0437 Afer_0437 436997 438088 + alanine racemase KEGG: ace:Acel_0355 alanine racemase~TIGRFAM: alanine racemase~PFAM: alanine racemase domain protein gene gene449 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0437 Afer_0438 Afer_0438 Afer_0438 438075 438644 + phage SPO1 DNA polymerase-related protein TIGRFAM: phage SPO1 DNA polymerase-related protein~PFAM: Uracil-DNA glycosylase superfamily~KEGG: eba:ebA6487 DNA polymerase-related protein%2Cbacteriophage-type gene gene450 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0438 Afer_0439 Afer_0439 Afer_0439 438641 439102 + protein of unknown function UPF0079 PFAM: protein of unknown function UPF0079~KEGG: xfn:XfasM23_2004 hypothetical protein gene gene451 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0439 Afer_0440 Afer_0440 Afer_0440 439099 439746 + peptidase M22 glycoprotease PFAM: peptidase M22 glycoprotease~KEGG: mag:amb4455 hypothetical protein gene gene452 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0440 Afer_0441 Afer_0441 Afer_0441 439743 440246 + ribosomal-protein-alanine acetyltransferase TIGRFAM: ribosomal-protein-alanine acetyltransferase~PFAM: GCN5-related N-acetyltransferase~KEGG: tte:TTE0537 acetyltransferase gene gene453 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0441 Afer_0442 Afer_0442 Afer_0442 440243 441286 + metalloendopeptidase%2C glycoprotease family KEGG: sma:SAV_4974 O-sialoglycoprotein endopeptidase~TIGRFAM: metalloendopeptidase%2C glycoprotease family~PFAM: peptidase M22 glycoprotease gene gene454 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0442 Afer_0443 Afer_0443 Afer_0443 441360 441653 + chaperonin Cpn10 PFAM: chaperonin Cpn10~KEGG: kra:Krad_0735 co-chaperonin GroES gene gene455 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0443 Afer_0444 Afer_0444 Afer_0444 441656 443290 + chaperonin GroEL TIGRFAM: chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1~KEGG: sco:SCO4762 chaperonin GroEL gene gene456 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0444 Afer_0445 Afer_0445 Afer_0445 443590 444081 - membrane protein of uknown function UCP014873 PFAM: membrane protein of uknown function UCP014873~KEGG: bcs:BCAN_B0338 hypothetical protein gene gene457 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0445 Afer_0446 Afer_0446 Afer_0446 444888 445208 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene458 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0446 Afer_0447 Afer_0447 Afer_0447 445208 446077 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_5060 integrase catalytic subunit gene gene459 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0447 Afer_0448 Afer_0448 Afer_0448 446155 446712 + conserved hypothetical protein KEGG: hypothetical protein gene gene460 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0448 Afer_0449 Afer_0449 Afer_0449 446709 447626 + hypothetical protein KEGG: bca:BCE_2353 triple helix repeat-containing collagen gene gene461 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0449 Afer_0450 Afer_0450 Afer_0450 447623 449665 + putative integral membrane protein KEGG: sma:SAV_2331 hypothetical protein gene gene462 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0450 Afer_0451 Afer_0451 Afer_0451 449667 451736 + hypothetical protein KEGG: stp:Strop_0191 hypothetical protein gene gene463 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0451 Afer_0452 Afer_0452 Afer_0452 451746 452804 + sortase family protein TIGRFAM: sortase family protein~PFAM: peptidase C60 sortase A and B~KEGG: bha:BH4010 hypothetical protein gene gene464 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0452 Afer_0453 Afer_0453 Afer_0453 453006 453779 + NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: afw:Anae109_0164 NUDIX hydrolase gene gene465 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0453 Afer_0454 Afer_0454 Afer_0454 453758 454534 - conserved hypothetical protein KEGG: tfu:Tfu_2983 hypothetical protein gene gene466 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0454 Afer_0455 Afer_0455 Afer_0455 454578 454955 - Camphor resistance CrcB protein PFAM: Camphor resistance CrcB protein~KEGG: msm:MSMEG_2134 CrcB protein gene gene467 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0455 Afer_0456 Afer_0456 Afer_0456 454952 455290 - protein of unknown function DUF190 PFAM: protein of unknown function DUF190~KEGG: nca:Noca_2956 hypothetical protein gene gene468 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0456 Afer_0457 Afer_0457 Afer_0457 455287 455736 - Camphor resistance CrcB protein PFAM: Camphor resistance CrcB protein~KEGG: cms:CMS_0830 putative integral membrane protein gene gene469 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0457 Afer_0458 Afer_0458 Afer_0458 455733 456641 - hypothetical protein KEGG: cyt:cce_0886 phosphate ABC transporter%2C periplasmic phosphate-binding protein gene gene470 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0458 Afer_0459 Afer_0459 Afer_0459 456752 457915 + IMP dehydrogenase family protein TIGRFAM: IMP dehydrogenase family protein~PFAM: IMP dehydrogenase/GMP reductase~KEGG: rxy:Rxyl_0815 inositol-5-monophosphate dehydrogenase gene gene471 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0459 Afer_0460 Afer_0460 Afer_0460 457915 459468 + GMP synthase%2C large subunit KEGG: fre:Franean1_5989 bifunctional GMP synthase/glutamine amidotransferase protein~TIGRFAM: GMP synthase%2C large subunit%3B GMP synthase%2C small subunit~PFAM: GMP synthase domain protein%3B ExsB family protein%3B glutamine amidotransferase class-I gene gene472 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0460 Afer_0461 Afer_0461 Afer_0461 459473 461620 + UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: tfu:Tfu_2580 ATP-dependent DNA helicase PcrA gene gene473 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0461 Afer_0462 Afer_0462 Afer_0462 462017 463270 + UDP-sulfoquinovose synthase PFAM: NAD-dependent epimerase/dehydratase~KEGG: rrs:RoseRS_0861 NAD-dependent epimerase/dehydratase gene gene474 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0462 Afer_0463 Afer_0463 Afer_0463 463307 464821 + hypothetical protein KEGG: ace:Acel_1450 RND family efflux transporter MFP subunit gene gene475 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0463 Afer_0464 Afer_0464 Afer_0464 464818 466713 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: mkm:Mkms_4650 glycosyl transferase%2C family 2 gene gene476 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0464 Afer_0465 Afer_0465 Afer_0465 466697 467563 + hypothetical protein gene gene477 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0465 Afer_0466 Afer_0466 Afer_0466 467599 468441 + hypothetical protein gene gene478 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0466 Afer_0467 Afer_0467 Afer_0467 468506 468910 + hypothetical protein gene gene479 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0467 Afer_0468 Afer_0468 Afer_0468 469348 469955 + pseudogene gene480 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0468 Afer_0469 Afer_0469 Afer_0469 470047 470931 - Squalene/phytoene synthase PFAM: Squalene/phytoene synthase~KEGG: saq:Sare_4931 squalene/phytoene synthase gene gene481 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0469 Afer_0470 Afer_0470 Afer_0470 470928 472418 - phytoene desaturase TIGRFAM: phytoene desaturase~PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: nfa:nfa43990 putative phytoene desaturase gene gene482 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0470 Afer_0471 Afer_0471 Afer_0471 472422 473510 - Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: saq:Sare_3478 polyprenyl synthetase gene gene483 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0471 Afer_0472 Afer_0472 Afer_0472 473643 475022 + peptidase U62 modulator of DNA gyrase PFAM: peptidase U62 modulator of DNA gyrase~KEGG: hmo:HM1_0268 modulator of DNA gyrase%2C putative gene gene484 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0472 Afer_0473 Afer_0473 Afer_0473 475015 476352 + peptidase U62 modulator of DNA gyrase PFAM: peptidase U62 modulator of DNA gyrase~KEGG: pth:PTH_1159 Zn-dependent protease gene gene485 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0473 Afer_0474 Afer_0474 Afer_0474 476353 476988 + PHP domain protein PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~KEGG: dge:Dgeo_2010 PHP-like protein gene gene486 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0474 Afer_0475 Afer_0475 Afer_0475 477021 478262 + MgtE intracellular region PFAM: MgtE intracellular region%3B CBS domain containing protein~SMART: CBS domain containing protein~KEGG: mav:MAV_2122 MgtE intracellular domain family protein gene gene487 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0475 Afer_0476 Afer_0476 Afer_0476 478345 479928 - natural resistance-associated macrophage protein KEGG: ace:Acel_0596 natural resistance-associated macrophage protein gene gene488 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0476 Afer_0477 Afer_0477 Afer_0477 480108 480815 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B methyltransferase small%3B Methyltransferase type 12~KEGG: hsl:OE2833R hypothetical protein gene gene489 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0477 Afer_0478 Afer_0478 Afer_0478 480859 481488 + protein of unknown function DUF159 PFAM: protein of unknown function DUF159~KEGG: scl:sce8138 hypothetical protein gene gene490 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0478 Afer_0479 Afer_0479 Afer_0479 481469 483376 - deoxyxylulose-5-phosphate synthase TIGRFAM: deoxyxylulose-5-phosphate synthase~PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: mab:MAB_2990c 1-deoxy-D-xylulose-5-phosphate synthase gene gene491 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0479 Afer_0480 Afer_0480 Afer_0480 483457 483783 + lycopene cyclase domain protein TIGRFAM: lycopene cyclase domain protein~KEGG: mjl:Mjls_5456 hypothetical protein gene gene492 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0480 Afer_0481 Afer_0481 Afer_0481 483780 484088 + lycopene cyclase domain protein TIGRFAM: lycopene cyclase domain protein~KEGG: mmi:MMAR_4809 lycopene cyclase%2C CrtYd gene gene493 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0481 Afer_0482 Afer_0482 Afer_0482 484153 484614 + fatty acid hydroxylase PFAM: fatty acid hydroxylase~KEGG: xau:Xaut_4535 carotene hydroxylase gene gene494 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0482 Afer_0483 Afer_0483 Afer_0483 484684 485247 + intracellular protease%2C PfpI family TIGRFAM: intracellular protease%2C PfpI family~PFAM: ThiJ/PfpI domain protein~KEGG: pto:PTO1077 protease I gene gene495 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0483 Afer_0484 Afer_0484 Afer_0484 485596 486060 - hypothetical protein KEGG: fra:Francci3_2745 hypothetical protein gene gene496 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0484 Afer_0485 Afer_0485 Afer_0485 486123 486617 - YbaK/prolyl-tRNA synthetase associated region PFAM: YbaK/prolyl-tRNA synthetase associated region~KEGG: acr:Acry_1918 YbaK/prolyl-tRNA synthetase associated region gene gene497 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0485 Afer_0486 Afer_0486 Afer_0486 486614 487867 - molybdenum cofactor synthesis domain protein TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: MoeA domain protein domain I and II%3B MoeA domain protein domain IV%3B molybdopterin binding domain~KEGG: ace:Acel_0167 molybdopterin molybdochelatase gene gene498 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0486 Afer_0487 Afer_0487 Afer_0487 487851 488741 - UTP-glucose-1-phosphate uridylyltransferase TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase~PFAM: Nucleotidyl transferase~KEGG: sma:SAV_3673 UTP:glucose-1-phosphate uridylyltransferase gene gene499 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0487 Afer_0488 Afer_0488 Afer_0488 488906 489229 + regulatory protein%2C FmdB family TIGRFAM: regulatory protein%2C FmdB family~KEGG: kra:Krad_3694 FmdB family regulatory protein gene gene500 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0488 Afer_0489 Afer_0489 Afer_0489 489340 490569 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: sgr:SGR_5187 putative glycosyl transferase gene gene501 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0489 Afer_0490 Afer_0490 Afer_0490 490566 491234 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methionine biosynthesis MetW protein%3B Methyltransferase type 12~KEGG: tfu:Tfu_0572 hypothetical protein gene gene502 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0490 Afer_0491 Afer_0491 Afer_0491 491228 492223 + conserved hypothetical protein KEGG: nfa:nfa25760 hypothetical protein gene gene503 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0491 Afer_0492 Afer_0492 Afer_0492 492195 492998 - hypothetical protein KEGG: sgr:SGR_5196 hypothetical protein gene gene504 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0492 Afer_0493 Afer_0493 Afer_0493 493006 495564 - Peptidase M1 membrane alanine aminopeptidase PFAM: Peptidase M1 membrane alanine aminopeptidase~KEGG: ank:AnaeK_2441 peptidase M1 membrane alanine aminopeptidase gene gene505 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0493 Afer_0494 Afer_0494 Afer_0494 495618 496700 + PfkB domain protein PFAM: PfkB domain protein~KEGG: rru:Rru_A0149 PfkB gene gene506 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0494 Afer_0495 Afer_0495 Afer_0495 497334 499886 + glycoside hydrolase 15-related PFAM: glycoside hydrolase 15-related~KEGG: ote:Oter_3331 glycoside hydrolase 15-related gene gene507 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0495 Afer_0496 Afer_0496 Afer_0496 499929 501305 + glucose-6-phosphate 1-dehydrogenase KEGG: afw:Anae109_0597 glucose-6-phosphate 1- dehydrogenase~TIGRFAM: glucose-6-phosphate 1-dehydrogenase~PFAM: glucose-6-phosphate dehydrogenase gene gene508 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0496 Afer_0497 Afer_0497 Afer_0497 501336 502205 + ROK family protein PFAM: ROK family protein~KEGG: gka:GK2442 glucokinase gene gene509 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0497 Afer_0498 Afer_0498 Afer_0498 502202 503371 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: pto:PTO1267 transporter gene gene510 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0498 Afer_0499 Afer_0499 Afer_0499 503385 504383 - galactose-1-phosphate uridylyltransferase KEGG: trq:TRQ2_0031 galactose-1-phosphate uridylyltransferase~TIGRFAM: galactose-1-phosphate uridylyltransferase~PFAM: galactose-1-phosphate uridyl transferase domain protein gene gene511 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0499 Afer_0500 Afer_0500 Afer_0500 504505 505647 + Cysteine desulfurase PFAM: aminotransferase class V~KEGG: ank:AnaeK_1104 aminotransferase class V gene gene512 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0500 Afer_0501 Afer_0501 Afer_0501 505644 506117 + hypothetical protein gene gene513 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0501 Afer_0502 Afer_0502 Afer_0502 506074 506796 - hypothetical protein gene gene514 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0502 Afer_0503 Afer_0503 Afer_0503 507051 508340 - Extracellular ligand-binding receptor PFAM: Extracellular ligand-binding receptor~KEGG: hwa:HQ3303A ABC-type branched-chain amino acid transport systems%2C substrate-binding protein gene gene515 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0503 Afer_0504 Afer_0504 Afer_0504 508361 509125 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: cya:CYA_2623 hydrophobic amino acid ABC transporter ATP-binding protein gene gene516 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0504 Afer_0505 Afer_0505 Afer_0505 509106 509903 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: hwa:HQ2964A ABC-type branched-chain amino acid transport systems%2C ATP-binding protein I gene gene517 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0505 Afer_0506 Afer_0506 Afer_0506 509890 510909 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: cya:CYA_2478 hydrophobic amino acid ABC transporter permease gene gene518 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0506 Afer_0507 Afer_0507 Afer_0507 510920 511795 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: csa:Csal_1420 inner-membrane translocator gene gene519 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0507 Afer_0508 Afer_0508 Afer_0508 513386 514060 - response regulator receiver and unknown domain protein PFAM: response regulator receiver~SMART: response regulator receiver~KEGG: sgr:SGR_1695 putative two-component system response regulator gene gene520 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0508 Afer_0509 Afer_0509 Afer_0509 514253 514573 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene521 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0509 Afer_0510 Afer_0510 Afer_0510 514573 515442 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_5060 integrase catalytic subunit gene gene522 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0510 Afer_0511 Afer_0511 Afer_0511 515385 516950 - signal transduction histidine kinase regulating citrate/malate metabolism PFAM: ATP-binding region ATPase domain protein~SMART: ATP-binding region ATPase domain protein~KEGG: aau:AAur_0705 putative two component sensor histidine kinase gene gene523 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0511 Afer_0512 Afer_0512 Afer_0512 517224 517638 - pseudogene gene524 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0512 Afer_0513 Afer_0513 Afer_0513 517643 518077 + hypothetical protein gene gene525 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0513 Afer_0514 Afer_0514 Afer_0514 518127 518303 - pseudogene gene526 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0514 Afer_0515 Afer_0515 Afer_0515 518389 519803 - pseudogene gene527 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0515 Afer_0516 Afer_0516 Afer_0516 519866 520144 + pseudogene gene528 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0516 Afer_0517 Afer_0517 Afer_0517 520210 520323 - pseudogene gene529 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0517 Afer_0518 Afer_0518 Afer_0518 520353 520562 - pseudogene gene530 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0518 Afer_0519 Afer_0519 Afer_0519 520658 521536 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: amr:AM1_A0193 integrase%2C catalytic region gene gene531 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0519 Afer_0520 Afer_0520 Afer_0520 521533 521862 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene532 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0520 Afer_0521 Afer_0521 Afer_0521 522269 523873 - phosphoesterase PFAM: phosphoesterase~KEGG: sai:Saci_1769 membrane associated phosphoesterase gene gene533 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0521 Afer_0522 Afer_0522 Afer_0522 524486 526147 - Sigma 54 interacting domain protein KEGG: sgr:SGR_3644 putative ABC transporter ATP- binding protein and permease component~TIGRFAM: ABC transporter%2C CydDC cysteine exporter (CydDC-E) family%2C permease/ATP-binding protein CydC~PFAM: ABC transporter related~SMART: AAA ATPase gene gene534 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0522 Afer_0523 Afer_0523 Afer_0523 526144 527814 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: sma:SAV_4258 ABC transporter ATP-binding protein gene gene535 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0523 Afer_0524 Afer_0524 Afer_0524 527811 528857 - cytochrome d ubiquinol oxidase%2C subunit II KEGG: hau:Haur_3758 cytochrome d ubiquinol oxidase%2C subunit II~TIGRFAM: cytochrome d ubiquinol oxidase%2C subunit II~PFAM: cytochrome bd ubiquinol oxidase subunit II gene gene536 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0524 Afer_0525 Afer_0525 Afer_0525 528867 530258 - cytochrome bd ubiquinol oxidase subunit I PFAM: cytochrome bd ubiquinol oxidase subunit I~KEGG: ace:Acel_0600 cytochrome bd ubiquinol oxidase%2C subunit I gene gene537 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0525 Afer_0526 Afer_0526 Afer_0526 530644 531525 - GHMP kinase PFAM: GHMP kinase~KEGG: pde:Pden_0423 4-diphosphocytidyl-2C-methyl-D- erythritol kinase gene gene538 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0526 Afer_0527 Afer_0527 Afer_0527 531522 532361 - ribosomal RNA adenine methylase transferase PFAM: ribosomal RNA adenine methylase transferase~SMART: ribosomal RNA adenine methylase transferase~KEGG: gtn:GTNG_0035 dimethyladenosine transferase gene gene539 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0527 Afer_0528 Afer_0528 Afer_0528 532367 533167 - hydrolase%2C TatD family TIGRFAM: hydrolase%2C TatD family~PFAM: TatD-related deoxyribonuclease%3B amidohydrolase 2~KEGG: scl:sce3778 TatD family deoxyribonuclease gene gene540 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0528 Afer_0529 Afer_0529 Afer_0529 533164 534675 - methionyl-tRNA synthetase TIGRFAM: methionyl-tRNA synthetase~PFAM: tRNA synthetase class I (M)~KEGG: ace:Acel_0175 methionyl-tRNA synthetase gene gene541 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0529 Afer_0530 Afer_0530 Afer_0530 534716 535576 - Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: aau:AAur_1330 tetrapyrrole methylase family protein gene gene542 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0530 Afer_0531 Afer_0531 Afer_0531 535573 535893 - hypothetical protein gene gene543 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0531 Afer_0532 Afer_0532 Afer_0532 535890 536963 - GTP-binding protein YchF TIGRFAM: GTP-binding protein YchF~PFAM: Protein of unknown function DUF933%3B GTP- binding protein HSR1-related~KEGG: kra:Krad_1124 translation-associated GTPase gene gene544 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0532 Afer_0533 Afer_0533 Afer_0533 537104 538216 - AAA ATPase central domain protein PFAM: AAA ATPase central domain protein%3B ATPase associated with various cellular activities AAA_5%3B magnesium chelatase ChlI subunit~SMART: AAA ATPase~KEGG: rxy:Rxyl_1040 recombination factor protein RarA gene gene545 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0533 Afer_0534 Afer_0534 Afer_0534 538213 539979 - aspartyl-tRNA synthetase TIGRFAM: aspartyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B GAD domain protein%3B nucleic acid binding OB-fold tRNA/helicase- type~KEGG: fra:Francci3_0692 aspartyl-tRNA synthetase gene gene546 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0534 Afer_0535 Afer_0535 Afer_0535 540051 540773 + precorrin-2 C20-methyltransferase TIGRFAM: precorrin-2 C20-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: sco:SCO1853 precorrin-2 C20-methyltransferase gene gene547 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0535 Afer_0536 Afer_0536 Afer_0536 540770 541267 + cobalbumin biosynthesis protein PFAM: cobalbumin biosynthesis protein~KEGG: nfa:nfa17010 putative cobinamide kinase/cobinamide phosphate guanylyltransferase gene gene548 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0536 Afer_0537 Afer_0537 Afer_0537 541268 541996 + cobalamin-5-phosphate synthase CobS PFAM: cobalamin-5-phosphate synthase CobS~KEGG: cak:Caul_2743 cobalamin 5'-phosphate synthase gene gene549 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0537 Afer_0538 Afer_0538 Afer_0538 541983 542882 + cobalamin biosynthesis protein CobD TIGRFAM: cobalamin biosynthesis protein CobD~PFAM: cobalamin biosynthesis protein CbiB~KEGG: tfu:Tfu_2224 cobalamin biosynthesis protein gene gene550 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0538 Afer_0539 Afer_0539 Afer_0539 542892 543365 + protein of unknown function UPF0047 PFAM: protein of unknown function UPF0047~KEGG: ace:Acel_1034 hypothetical protein gene gene551 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0539 Afer_0540 Afer_0540 Afer_0540 543362 543904 - dTDP-4-dehydrorhamnose 35-epimerase related PFAM: dTDP-4-dehydrorhamnose 35-epimerase related~KEGG: chu:CHU_3843 dTDP-4-dehydrorhamnose 3%2C5- epimerase gene gene552 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0540 Afer_0541 Afer_0541 Afer_0541 544042 545217 + hypothetical protein KEGG: acr:Acry_1011 hypothetical protein gene gene553 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0541 Afer_0542 Afer_0542 Afer_0542 545214 547286 - Oligopeptidase B PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B peptidase S9A prolyl oligopeptidase domain protein beta-propeller~KEGG: cmi:CMM_2114 putative protease II (oligopeptidase B) gene gene554 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0542 Afer_0543 Afer_0543 Afer_0543 547369 548769 + FeS assembly protein SufB TIGRFAM: FeS assembly protein SufB~PFAM: SufBD protein~KEGG: rxy:Rxyl_0170 iron-regulated ABC transporter membrane component SufB gene gene555 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0543 Afer_0544 Afer_0544 Afer_0544 549282 550685 + hypothetical protein KEGG: GSVIVT00021647001%3B assembled CDS gene gene556 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0544 Afer_0545 Afer_0545 Afer_0545 550718 551188 + conserved hypothetical protein KEGG: hau:Haur_1465 hypothetical protein gene gene557 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0545 Afer_0546 Afer_0546 Afer_0546 551433 551600 - pseudogene gene558 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0546 Afer_0547 Afer_0547 Afer_0547 551707 552126 - pseudogene gene559 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0547 Afer_0548 Afer_0548 Afer_0548 552245 552391 + pseudogene gene560 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0548 Afer_0549 Afer_0549 Afer_0549 552385 552618 + hypothetical protein gene gene561 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0549 Afer_0550 Afer_0550 Afer_0550 552745 553074 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene562 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0550 Afer_0551 Afer_0551 Afer_0551 553077 556162 + pseudogene gene563 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0551 Afer_0552 Afer_0552 Afer_0552 553596 554836 + pseudogene gene564 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0552 Afer_0553 Afer_0553 Afer_0553 554829 555560 + pseudogene gene565 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0553 Afer_0554 Afer_0554 Afer_0554 556487 557377 + restriction endonuclease PFAM: restriction endonuclease~KEGG: ace:Acel_0036 restriction endonuclease gene gene566 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0554 Afer_0555 Afer_0555 Afer_0555 557466 558176 + pseudogene gene567 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0555 Afer_0556 Afer_0556 Afer_0556 558732 559259 - protein of unknown function DUF1707 PFAM: protein of unknown function DUF1707~KEGG: sco:SCO5045 hypothetical protein gene gene568 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0556 Afer_0557 Afer_0557 Afer_0557 559344 561023 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: fra:Francci3_0309 periplasmic sensor signal transduction histidine kinase gene gene569 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0557 Afer_0558 Afer_0558 Afer_0558 561004 561717 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: kra:Krad_3036 two component transcriptional regulator gene gene570 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0558 Afer_0559 Afer_0559 Afer_0559 561769 563232 - PDZ/DHR/GLGF domain protein PFAM: PDZ/DHR/GLGF domain protein%3B peptidase S1 and S6 chymotrypsin/Hap~SMART: PDZ/DHR/GLGF domain protein~KEGG: ace:Acel_1716 peptidase S1 and S6%2C chymotrypsin/Hap gene gene571 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0559 Afer_0560 Afer_0560 Afer_0560 563311 564051 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: dge:Dgeo_0145 enoyl-CoA hydratase/isomerase gene gene572 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0560 Afer_0561 Afer_0561 Afer_0561 564139 565320 + SufBD protein PFAM: SufBD protein~KEGG: rxy:Rxyl_0168 iron-regulated ABC transporter permease protein SufD gene gene573 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0561 Afer_0562 Afer_0562 Afer_0562 565308 565628 + Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: sgr:SGR_5597 putative ferredoxin subunit of phenylpropionate dioxygenase gene gene574 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0562 Afer_0563 Afer_0563 Afer_0563 565625 566374 + FeS assembly ATPase SufC KEGG: rce:RC1_0492 FeS assembly ATPase SufC~TIGRFAM: FeS assembly ATPase SufC~PFAM: ABC transporter related~SMART: AAA ATPase gene gene575 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0563 Afer_0564 Afer_0564 Afer_0564 566367 567485 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: sma:SAV_1609 ferredoxin reductase gene gene576 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0564 Afer_0565 Afer_0565 Afer_0565 567500 567691 - ferredoxin (3Fe-4S) KEGG: mjl:Mjls_0441 ferredoxin (3Fe-4S) gene gene577 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0565 Afer_0566 Afer_0566 Afer_0566 567810 568571 + FeS assembly ATPase SufC TIGRFAM: FeS assembly ATPase SufC~PFAM: ABC transporter related~KEGG: rxy:Rxyl_0171 FeS assembly ATPase SufC gene gene578 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0566 Afer_0567 Afer_0567 Afer_0567 568568 569818 + cysteine desulfurase%2C SufS subfamily KEGG: ace:Acel_1138 SufS subfamily cysteine desulfurase~TIGRFAM: cysteine desulfurase%2C SufS subfamily~PFAM: aminotransferase class V gene gene579 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0567 Afer_0568 Afer_0568 Afer_0568 569827 570288 + SUF system FeS assembly protein%2C NifU family TIGRFAM: SUF system FeS assembly protein%2C NifU family~PFAM: nitrogen-fixing NifU domain protein~KEGG: tth:TTC1374 IscU protein gene gene580 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0568 Afer_0569 Afer_0569 Afer_0569 570742 571362 - hypothetical protein gene gene581 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0569 Afer_0570 Afer_0570 Afer_0570 572014 573825 - hypothetical protein KEGG: rrs:RoseRS_4277 Ig domain-containing protein gene gene582 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0570 Afer_0571 Afer_0571 Afer_0571 574304 575689 + ATPase PFAM: ATPase~KEGG: sen:SACE_7308 hypothetical protein gene gene583 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0571 Afer_0572 Afer_0572 Afer_0572 575805 576959 + glycerate kinase KEGG: rha:RHA1_ro03229 glycerate kinase~TIGRFAM: glycerate kinase~PFAM: glycerate kinase gene gene584 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0572 Afer_0573 Afer_0573 Afer_0573 576984 578414 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: ace:Acel_1285 aldehyde dehydrogenase gene gene585 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0573 Afer_0574 Afer_0574 Afer_0574 578672 579226 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~SMART: regulatory protein AsnC/Lrp family~KEGG: sgr:SGR_1846 AsnC family transcriptional regulator gene gene586 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0574 Afer_0575 Afer_0575 Afer_0575 579326 580690 + aminotransferase class-III PFAM: aminotransferase class-III~KEGG: ace:Acel_1287 hypothetical protein gene gene587 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0575 Afer_0576 Afer_0576 Afer_0576 580736 582745 + TrwC relaxase PFAM: TrwC relaxase~KEGG: fal:FRAAL6333 putative conjugal transfer protein TraA gene gene588 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0576 Afer_0577 Afer_0577 Afer_0577 582820 583704 + hypothetical protein KEGG: oih:OB1441 hypothetical protein gene gene589 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0577 Afer_0578 Afer_0578 Afer_0578 583734 585563 + GTP-binding protein TypA TIGRFAM: GTP-binding protein TypA%3B small GTP- binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor G domain protein%3B elongation factor Tu domain 2 protein~KEGG: fra:Francci3_3865 GTP-binding protein TypA gene gene590 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0578 Afer_0579 Afer_0579 Afer_0579 585531 585881 - hypothetical protein gene gene591 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0579 Afer_0580 Afer_0580 Afer_0580 585868 586857 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: fal:FRAAL0333 hypothetical protein gene gene592 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0580 Afer_0581 Afer_0581 Afer_0581 586907 588148 + amine oxidase PFAM: amine oxidase%3B FAD dependent oxidoreductase~KEGG: stp:Strop_3418 amine oxidase gene gene593 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0581 Afer_0582 Afer_0582 Afer_0582 588145 589488 + carboxyl transferase PFAM: carboxyl transferase~KEGG: saq:Sare_0802 carboxyl transferase gene gene594 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0582 Afer_0583 Afer_0583 Afer_0583 589495 591291 + hypothetical protein KEGG: art:Arth_2181 transcriptional regulator-like protein gene gene595 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0583 Afer_0584 Afer_0584 Afer_0584 591281 591706 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding~KEGG: nfa:nfa31580 hypothetical protein gene gene596 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0584 Afer_0585 Afer_0585 Afer_0585 591747 592289 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: sma:SAP1p77 MarR family transcriptional regulator gene gene597 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0585 Afer_0586 Afer_0586 Afer_0586 592449 594785 + MMPL domain protein PFAM: MMPL domain protein~KEGG: sco:SCO5084 hypothetical protein gene gene598 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0586 Afer_0587 Afer_0587 Afer_0587 594796 595593 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: pla:Plav_2620 enoyl-CoA hydratase gene gene599 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0587 Afer_0588 Afer_0588 Afer_0588 595607 597154 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: fra:Francci3_2165 AMP-dependent synthetase and ligase gene gene600 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0588 Afer_0589 Afer_0589 Afer_0589 597151 597948 - LmbE family protein PFAM: LmbE family protein~KEGG: rca:Rcas_1145 LmbE family protein gene gene601 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0589 Afer_0590 Afer_0590 Afer_0590 597945 598565 - protein of unknown function DUF121 PFAM: protein of unknown function DUF121~KEGG: nfa:nfa42070 hypothetical protein gene gene602 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0590 Afer_0591 Afer_0591 Afer_0591 598595 599197 + Ribonuclease H PFAM: ribonuclease HII/HIII~KEGG: hha:Hhal_1454 ribonuclease H gene gene603 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0591 Afer_0592 Afer_0592 Afer_0592 599995 600897 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: fal:FRAAL1392 hypothetical protein gene gene604 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0592 Afer_0593 Afer_0593 Afer_0593 600925 601038 + hypothetical protein gene gene605 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0593 Afer_0594 Afer_0594 Afer_0594 601035 601829 - hypothetical protein gene gene606 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0594 Afer_0595 Afer_0595 Afer_0595 601924 602163 - hypothetical protein gene gene607 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0595 Afer_0596 Afer_0596 Afer_0596 602409 602633 + hypothetical protein gene gene608 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0596 Afer_0597 Afer_0597 Afer_0597 602630 603475 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: sru:SRU_2341 alpha/beta fold family hydrolase gene gene609 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0597 Afer_0598 Afer_0598 Afer_0598 603468 605048 + Mur ligase middle domain protein PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~KEGG: sru:SRU_2342 Mur ligase family protein gene gene610 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0598 Afer_0599 Afer_0599 Afer_0599 605094 606203 + D-alanine--D-alanine ligase PFAM: D-alanine--D-alanine ligase domain protein~KEGG: sru:SRU_2197 D-alanine--D-alanine ligase gene gene611 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0599 Afer_0600 Afer_0600 Afer_0600 606241 606939 + membrane-flanked domain protein PFAM: membrane-flanked domain~KEGG: hau:Haur_2709 membrane-flanked domain- containing protein gene gene612 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0600 Afer_0601 Afer_0601 Afer_0601 606936 607736 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: esa:ESA_03129 hypothetical protein gene gene613 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0601 Afer_0602 Afer_0602 Afer_0602 607720 608490 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: fra:Francci3_3910 alpha/beta hydrolase fold gene gene614 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0602 Afer_0603 Afer_0603 Afer_0603 608487 609608 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: mav:MAV_1284 Mcr protein gene gene615 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0603 Afer_0604 Afer_0604 Afer_0604 609610 610809 + conserved hypothetical protein KEGG: fra:Francci3_2361 hypothetical protein gene gene616 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0604 Afer_0605 Afer_0605 Afer_0605 610869 611849 + Ion transport 2 domain protein PFAM: Ion transport 2 domain protein %3B TrkA-N domain protein~KEGG: sru:SRU_0409 potassium channel%2C putative gene gene617 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0605 Afer_0606 Afer_0606 Afer_0606 611816 613477 - conserved hypothetical protein KEGG: fra:Francci3_2206 hypothetical protein gene gene618 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0606 Afer_0607 Afer_0607 Afer_0607 613545 614225 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: art:Arth_1175 GCN5-related N- acetyltransferase gene gene619 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0607 Afer_0608 Afer_0608 Afer_0608 614273 614986 + peptidase C26 PFAM: peptidase C26%3B glutamine amidotransferase class-I~KEGG: mta:Moth_2164 peptidase C26 gene gene620 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0608 Afer_0609 Afer_0609 Afer_0609 614983 615732 + HAD-superfamily hydrolase%2C subfamily IA%2C variant 3 TIGRFAM: HAD-superfamily hydrolase%2C subfamily IA%2C variant 3~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: tbd:Tbd_0690 HAD family hydrolase gene gene621 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0609 Afer_0610 Afer_0610 Afer_0610 615856 616260 + putative phage repressor PFAM: peptidase S24 and S26 domain protein~KEGG: sde:Sde_2043 folylpolyglutamate synthetase gene gene622 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0610 Afer_0611 Afer_0611 Afer_0611 616591 616956 - hypothetical protein KEGG: mpo:Mpop_0738 hypothetical protein gene gene623 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0611 Afer_0612 Afer_0612 Afer_0612 616953 619400 - peptidase S45 penicillin amidase PFAM: peptidase S45 penicillin amidase~KEGG: tac:Ta1462 penicillin amidase precursor related protein gene gene624 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0612 Afer_0613 Afer_0613 Afer_0613 619456 619830 - conserved hypothetical protein KEGG: cti:RALTA_B0059 conserved hypothetical protein%3B putative exported protein%3B contains cristalline beta-sheet repeat similar to EBV nuclear antigen 1 (EBNA- 1) and fibroin gene gene625 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0613 Afer_0614 Afer_0614 Afer_0614 619887 620657 + conserved hypothetical protein KEGG: pap:PSPA7_5451 hypothetical protein gene gene626 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0614 Afer_0615 Afer_0615 Afer_0615 620658 621488 + HAD-superfamily hydrolase%2C subfamily IIB TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIB~PFAM: Haloacid dehalogenase domain protein hydrolase type 3%3B sucrose-6F-phosphate phosphohydrolase~KEGG: kra:Krad_0255 HAD family hydrolase gene gene627 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0615 Afer_0616 Afer_0616 Afer_0616 621516 622175 + hypothetical protein gene gene628 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0616 Afer_0617 Afer_0617 Afer_0617 622196 622969 + inositol monophosphatase PFAM: inositol monophosphatase~KEGG: mth:MTH871 bifunctional inositol-1 monophosphatase/fructose-1%2C6-bisphosphatase gene gene629 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0617 Afer_0618 Afer_0618 Afer_0618 622966 623433 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: afw:Anae109_1562 GCN5-related N- acetyltransferase gene gene630 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0618 Afer_0619 Afer_0619 Afer_0619 624057 625013 - conserved hypothetical protein KEGG: maq:Maqu_0232 hypothetical protein gene gene631 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0619 Afer_0620 Afer_0620 Afer_0620 625457 626605 + conserved hypothetical protein KEGG: mem:Memar_0869 hypothetical protein gene gene632 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0620 Afer_0621 Afer_0621 Afer_0621 626952 627884 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: lpl:lp_2959 transport protein gene gene634 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0621 Afer_0622 Afer_0622 Afer_0622 627962 629344 + Malate dehydrogenase (oxaloacetate- decarboxylating) PFAM: malic protein NAD-binding%3B amino acid-binding ACT domain protein%3B malic protein domain protein~KEGG: nca:Noca_0113 malate dehydrogenase gene gene635 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0622 Afer_0623 Afer_0623 Afer_0623 629331 630053 - hypothetical protein KEGG: SILV%3B silver homolog (mouse) gene gene636 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0623 Afer_0624 Afer_0624 Afer_0624 630128 631126 + integrase family protein PFAM: integrase family protein%3B integrase domain protein SAM domain protein~KEGG: sew:SeSA_A4159 tyrosine recombinase XerC gene gene637 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0624 Afer_0625 Afer_0625 Afer_0625 631123 631887 + RNA polymerase%2C sigma 28 subunit%2C FliA/WhiG KEGG: ace:Acel_1546 RNA polymerase sigma factor WhiG~TIGRFAM: RNA polymerase sigma factor%2C FliA/WhiG family%3B RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 4 domain protein%3B sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma- 70 region 3 domain protein gene gene638 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0625 Afer_0626 Afer_0626 Afer_0626 632016 632729 + ribosomal protein S2 TIGRFAM: ribosomal protein S2~PFAM: ribosomal protein S2~KEGG: msm:MSMEG_2519 ribosomal protein S2 gene gene639 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0626 Afer_0627 Afer_0627 Afer_0627 632762 633553 + translation elongation factor Ts TIGRFAM: translation elongation factor Ts~PFAM: Translation elongation factor EFTs/EF1B dimerization%3B ubiquitin-associated- domain-containing protein~KEGG: ace:Acel_1541 elongation factor Ts gene gene640 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0627 Afer_0628 Afer_0628 Afer_0628 633556 634275 + uridylate kinase TIGRFAM: uridylate kinase~PFAM: aspartate/glutamate/uridylate kinase~KEGG: hypothetical protein%3B K09903 uridylate kinase gene gene641 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0628 Afer_0629 Afer_0629 Afer_0629 634275 634847 + ribosome recycling factor TIGRFAM: ribosome recycling factor~PFAM: ribosome recycling factor~KEGG: ace:Acel_1539 ribosome recycling factor gene gene642 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0629 Afer_0630 Afer_0630 Afer_0630 634856 636283 + Phosphatidate cytidylyltransferase PFAM: phosphatidate cytidylyltransferase~KEGG: sth:STH1497 phosphatidate cytidylyltransferase gene gene643 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0630 Afer_0631 Afer_0631 Afer_0631 636303 637460 + 1-deoxy-D-xylulose 5-phosphate reductoisomerase KEGG: dau:Daud_0615 1-deoxy-D-xylulose 5-phosphate reductoisomerase~TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase~PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein gene gene644 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0631 Afer_0632 Afer_0632 Afer_0632 637453 638739 + peptidase M50 PFAM: peptidase M50~SMART: PDZ/DHR/GLGF domain protein~KEGG: ace:Acel_1523 peptidase M50 gene gene645 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0632 Afer_0633 Afer_0633 Afer_0633 638754 639941 + 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase KEGG: ace:Acel_1522 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase~TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase~PFAM: IspG family protein gene gene646 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0633 Afer_0634 Afer_0634 Afer_0634 639953 641671 + prolyl-tRNA synthetase KEGG: mta:Moth_1044 prolyl-tRNA synthetase~TIGRFAM: prolyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B YbaK/prolyl-tRNA synthetase associated region%3B Anticodon- binding domain protein gene gene647 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0634 Afer_0635 Afer_0635 Afer_0635 641774 642253 + hypothetical protein KEGG: maq:Maqu_3350 hypothetical protein gene gene648 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0635 Afer_0636 Afer_0636 Afer_0636 642243 643235 + NusA antitermination factor KEGG: hmo:HM1_2310 transcription termination factor NusA~TIGRFAM: transcription termination factor NusA~PFAM: NusA domain protein%3B RNA binding S1 domain protein~SMART: RNA binding S1 domain protein gene gene649 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0636 Afer_0637 Afer_0637 Afer_0637 643298 643510 + hypothetical protein KEGG: pmj:P9211_16151 nucleic-acid-binding protein implicated in transcription termination gene gene650 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0637 Afer_0638 Afer_0638 Afer_0638 643567 646224 + translation initiation factor IF-2 TIGRFAM: translation initiation factor IF-2%3B small GTP-binding protein~PFAM: protein synthesis factor GTP-binding%3B elongation factor Tu domain 2 protein%3B GTP-binding protein HSR1-related%3B translation initiation factor IF-2 domain protein~KEGG: ace:Acel_1515 translation initiation factor IF-2 gene gene651 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0638 Afer_0639 Afer_0639 Afer_0639 646227 646610 + ribosome-binding factor A TIGRFAM: ribosome-binding factor A~PFAM: ribosome-binding factor A~KEGG: csa:Csal_3073 ribosome-binding factor A gene gene652 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0639 Afer_0640 Afer_0640 Afer_0640 646582 647478 + tRNA pseudouridine synthase B TIGRFAM: tRNA pseudouridine synthase B~PFAM: pseudouridylate synthase TruB domain protein%3B tRNA pseudouridine synthase B~KEGG: ace:Acel_1512 tRNA pseudouridine synthase B gene gene653 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0640 Afer_0641 Afer_0641 Afer_0641 647475 648419 + riboflavin biosynthesis protein RibF TIGRFAM: riboflavin biosynthesis protein RibF~PFAM: Riboflavin kinase%3B FAD synthetase~KEGG: lxx:Lxx07280 riboflavin kinase/FMN adenyltransferase gene gene654 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0641 Afer_0642 Afer_0642 Afer_0642 648497 648754 + ribosomal protein S15 TIGRFAM: ribosomal protein S15~PFAM: ribosomal protein S15~KEGG: cbe:Cbei_1207 30S ribosomal protein S15 gene gene655 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0642 Afer_0643 Afer_0643 Afer_0643 648815 651193 + Polyribonucleotide nucleotidyltransferase KEGG: ace:Acel_1508 polynucleotide phosphorylase/polyadenylase~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2%3B RNA binding S1 domain protein%3B Polynucleotide phosphorylase%2C phosphorolytic RNA-binding%2C bacterial/organelle-type%3B KH type 1 domain protein~SMART: RNA binding S1 domain protein%3B KH domain protein gene gene656 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0643 Afer_0644 Afer_0644 Afer_0644 651374 652195 + Inositol-phosphate phosphatase PFAM: inositol monophosphatase~KEGG: stp:Strop_1476 inositol-phosphate phosphatase gene gene657 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0644 Afer_0645 Afer_0645 Afer_0645 652206 653006 + dihydrodipicolinate reductase KEGG: hmo:HM1_2327 dihydrodipicolinate reductase~TIGRFAM: dihydrodipicolinate reductase~PFAM: dihydrodipicolinate reductase gene gene658 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0645 Afer_0646 Afer_0646 Afer_0646 653026 653955 + dihydrodipicolinate synthase TIGRFAM: dihydrodipicolinate synthase~PFAM: dihydrodipicolinate synthetase~KEGG: cvi:CV_2048 dihydrodipicolinate synthase gene gene659 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0646 Afer_0647 Afer_0647 Afer_0647 653942 655597 + beta-lactamase domain protein PFAM: beta-lactamase domain protein%3B RNA- metabolising metallo-beta-lactamase~KEGG: swo:Swol_1268 metallo-beta-lactamase family protein gene gene660 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0647 Afer_0648 Afer_0648 Afer_0648 655745 657919 + cell division FtsK/SpoIIIE PFAM: cell division FtsK/SpoIIIE~SMART: AAA ATPase~KEGG: ace:Acel_1501 cell division FtsK/SpoIIIE gene gene661 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0648 Afer_0649 Afer_0649 Afer_0649 658001 659251 + peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1~KEGG: sco:SCO4439 D-alanyl-D-alanine carboxypeptidase gene gene662 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0649 Afer_0650 Afer_0650 Afer_0650 659251 660186 + Homoserine kinase PFAM: GHMP kinase%3B GHMP kinase domain protein~KEGG: mta:Moth_1305 homoserine kinase gene gene663 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0650 Afer_0651 Afer_0651 Afer_0651 660188 660760 + CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: mbb:BCG_2762c putative pgp synthase pgsA3 gene gene664 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0651 Afer_0652 Afer_0652 Afer_0652 660772 662034 + competence/damage-inducible protein CinA TIGRFAM: competence/damage-inducible protein CinA~PFAM: CinA domain protein%3B molybdopterin binding domain~KEGG: fal:FRAAL5732 competence-inducible (CinA- like) protein gene gene665 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0652 Afer_0653 Afer_0653 Afer_0653 662101 663141 + recA protein KEGG: saq:Sare_1389 RecA protein~TIGRFAM: recA protein~PFAM: RecA domain protein~SMART: AAA ATPase gene gene666 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0653 Afer_0654 Afer_0654 Afer_0654 663185 664648 + RNA modification enzyme%2C MiaB family KEGG: mkm:Mkms_2203 RNA modification enzyme%2C MiaB family~TIGRFAM: RNA modification enzyme%2C MiaB family%3B tRNA- i(6)A37 thiotransferase enzyme MiaB~PFAM: Protein of unknown function UPF0004 %3B Radical SAM domain protein%3B deoxyribonuclease/rho motif-related TRAM~SMART: Elongator protein 3/MiaB/NifB gene gene667 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0654 Afer_0655 Afer_0655 Afer_0655 664588 665721 - Mandelate racemase/muconate lactonizing protein PFAM: Mandelate racemase/muconate lactonizing protein~KEGG: gtn:GTNG_0815 N-acylamino acid racemase gene gene668 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0655 Afer_0656 Afer_0656 Afer_0656 665735 666667 + tRNA isopentenyltransferase PFAM: tRNA isopentenyltransferase~KEGG: blj:BLD_0277 tRNA delta-2-isopentenyl pyrophosphate transferase gene gene669 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0656 Afer_0657 Afer_0657 Afer_0657 666664 667428 + diaminopimelate epimerase KEGG: msm:MSMEG_2735 diaminopimelate epimerase~TIGRFAM: diaminopimelate epimerase~PFAM: diaminopimelate epimerase gene gene670 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0657 Afer_0658 Afer_0658 Afer_0658 667425 668702 + GTP-binding proten HflX TIGRFAM: GTP-binding proten HflX~PFAM: GTP-binding protein HSR1-related~KEGG: pth:PTH_2120 GTPase gene gene671 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0658 Afer_0659 Afer_0659 Afer_0659 668707 669792 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: fre:Franean1_0872 N-succinyldiaminopimelate aminotransferase gene gene672 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0659 Afer_0660 Afer_0660 Afer_0660 669789 670604 + 2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxylateN-su ccinyltransferase KEGG: ace:Acel_1844 2%2C3%2C4%2C5-tetrahydropyridine-2- carboxylate N-succinyltransferase gene gene673 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0660 Afer_0661 Afer_0661 Afer_0661 670601 671635 + peptidase M20 PFAM: peptidase M20%3B peptidase dimerization domain protein~KEGG: tfu:Tfu_0495 dipeptidase gene gene674 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0661 Afer_0662 Afer_0662 Afer_0662 671886 672755 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_5060 integrase catalytic subunit gene gene675 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0662 Afer_0663 Afer_0663 Afer_0663 672755 673075 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene676 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0663 Afer_0664 Afer_0664 Afer_0664 674017 674343 + ISChy4%2C transposase KEGG: chy:CHY_1117 ISChy4%2C transposase gene gene677 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0664 Afer_0665 Afer_0665 Afer_0665 675023 676024 - NMT1/THI5 like domain protein PFAM: NMT1/THI5 like domain protein~KEGG: rpc:RPC_0844 ABC transporter substrate- binding protein gene gene678 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0665 Afer_0666 Afer_0666 Afer_0666 676056 676871 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: eba:p2A122 putative taurine transport system permease protein gene gene679 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0666 Afer_0667 Afer_0667 Afer_0667 676868 677689 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mem:Memar_0849 ABC transporter-related protein gene gene680 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0667 Afer_0668 Afer_0668 Afer_0668 677703 678326 - SOS-response transcriptional repressor%2C LexA KEGG: nfa:nfa38000 LexA repressor~TIGRFAM: LexA repressor~PFAM: LexA DNA-binding domain protein%3B peptidase S24 and S26 domain protein gene gene681 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0668 Afer_0669 Afer_0669 Afer_0669 678436 678918 + ATP-cone domain protein PFAM: ATP-cone domain protein~KEGG: xau:Xaut_4277 ATP-cone domain-containing protein gene gene682 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0669 Afer_0670 Afer_0670 Afer_0670 678947 679411 + conserved hypothetical protein KEGG: tfu:Tfu_0325 hypothetical protein gene gene683 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0670 Afer_0671 Afer_0671 Afer_0671 679421 679735 + NADH:ubiquinone oxidoreductase%2Csubunit RnfB KEGG: reh:H16_A1148 predicted NADH:ubiquinone oxidoreductase%2Csubunit RnfB gene gene684 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0671 Afer_0672 Afer_0672 Afer_0672 680268 680867 + hypothetical protein KEGG: fra:Francci3_0169 kelch repeat-containing protein gene gene685 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0672 Afer_0673 Afer_0673 Afer_0673 681103 681972 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_5060 integrase catalytic subunit gene gene686 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0673 Afer_0674 Afer_0674 Afer_0674 681972 682292 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene687 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0674 Afer_0675 Afer_0675 Afer_0675 682635 682718 - pseudogene gene688 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0675 Afer_0676 Afer_0676 Afer_0676 682871 683311 - PilT protein domain protein PFAM: PilT protein domain protein~KEGG: mtf:TBFG_10560 hypothetical protein gene gene689 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0676 Afer_0677 Afer_0677 Afer_0677 683460 683716 + pseudogene gene690 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0677 Afer_0678 Afer_0678 Afer_0678 683886 684215 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene691 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0678 Afer_0679 Afer_0679 Afer_0679 684428 685435 + aromatic amino acid beta-eliminating lyase/threonine aldolase PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase%3B aminotransferase class I and II~KEGG: afw:Anae109_3740 threonine aldolase gene gene692 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0679 Afer_0680 Afer_0680 Afer_0680 685452 686156 + LmbE family protein PFAM: LmbE family protein~KEGG: cau:Caur_0355 LmbE family protein gene gene693 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0680 Afer_0681 Afer_0681 Afer_0681 686168 686548 + hypothetical protein KEGG: afw:Anae109_0918 TfuA domain-containing protein gene gene694 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0681 Afer_0682 Afer_0682 Afer_0682 686663 687019 + hypothetical protein KEGG: fra:Francci3_1402 hypothetical protein gene gene695 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0682 Afer_0683 Afer_0683 Afer_0683 687016 687258 + hypothetical protein gene gene696 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0683 Afer_0684 Afer_0684 Afer_0684 687301 687900 + HNH endonuclease PFAM: HNH endonuclease~SMART: HNH nuclease~KEGG: sgr:SGR_4876 putative endonuclease gene gene697 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0684 Afer_0685 Afer_0685 Afer_0685 688423 688866 + isoprenylcysteine carboxyl methyltransferase KEGG: rpa:RPA4458 isoprenylcysteine carboxyl methyltransferase gene gene698 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0685 Afer_0686 Afer_0686 Afer_0686 688818 689579 - conserved hypothetical protein TIGRFAM: conserved hypothetical protein~KEGG: afw:Anae109_3061 hypothetical protein gene gene699 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0686 Afer_0687 Afer_0687 Afer_0687 689866 690744 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: rha:RHA1_ro11026 transposase gene gene700 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0687 Afer_0688 Afer_0688 Afer_0688 690767 691064 - pseudogene gene701 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0688 Afer_0689 Afer_0689 Afer_0689 691776 693700 - pseudogene gene702 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0689 Afer_0690 Afer_0690 Afer_0690 692423 692743 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene703 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0690 Afer_0691 Afer_0691 Afer_0691 692743 693612 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_5060 integrase catalytic subunit gene gene704 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0691 Afer_0692 Afer_0692 Afer_0692 693816 694745 - thiamine-monophosphate kinase KEGG: lxx:Lxx09720 thiamine-monophosphate kinase~TIGRFAM: thiamine-monophosphate kinase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene705 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0692 Afer_0693 Afer_0693 Afer_0693 694852 696648 + Phosphoenolpyruvate carboxykinase (GTP) PFAM: phosphoenolpyruvate carboxykinase (GTP)~KEGG: swi:Swit_5171 phosphoenolpyruvate carboxykinase gene gene706 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0693 Afer_0694 Afer_0694 Afer_0694 696670 697917 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ace:Acel_1472 major facilitator transporter gene gene707 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0694 Afer_0695 Afer_0695 Afer_0695 697966 698352 - pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding~KEGG: fra:Francci3_4252 pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding gene gene708 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0695 Afer_0696 Afer_0696 Afer_0696 698346 701786 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: ttj:TTHB116 acyl-CoA dehydrogenase%2C short- chain specific ( AidB protein) gene gene709 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0696 Afer_0697 Afer_0697 Afer_0697 701780 703354 - Gamma-glutamyltransferase PFAM: gamma-glutamyltranspeptidase~KEGG: bbr:BB0978 gamma-glutamyltranspeptidase precursor gene gene710 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0697 Afer_0698 Afer_0698 Afer_0698 703638 704693 + alanine dehydrogenase/PNT domain protein PFAM: alanine dehydrogenase/PNT domain protein~KEGG: gtn:GTNG_2677 alanine dehydrogenase gene gene711 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0698 Afer_0699 Afer_0699 Afer_0699 704693 706063 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: ace:Acel_1280 FAD dependent oxidoreductase gene gene712 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0699 Afer_0700 Afer_0700 Afer_0700 706139 707404 + aminotransferase class-III PFAM: aminotransferase class-III~KEGG: rca:Rcas_3219 aminotransferase class-III gene gene713 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0700 Afer_0701 Afer_0701 Afer_0701 707541 708734 - hypothetical protein KEGG: scl:sce3939 hypothetical protein gene gene714 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0701 Afer_0702 Afer_0702 Afer_0702 708731 710302 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B histidine kinase HAMP region domain protein~KEGG: nca:Noca_1614 ATPase domain-containing protein gene gene715 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0702 Afer_0703 Afer_0703 Afer_0703 710312 711022 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: rha:RHA1_ro08012 response regulator%2C two- component system gene gene716 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0703 Afer_0704 Afer_0704 Afer_0704 711072 711668 - nitroreductase PFAM: nitroreductase~KEGG: sdn:Sden_2315 nitroreductase gene gene717 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0704 Afer_0705 Afer_0705 Afer_0705 711665 712270 - beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: sen:SACE_5316 metallo-beta-lactamase superfamily protein gene gene718 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0705 Afer_0706 Afer_0706 Afer_0706 712403 712822 + hypothetical protein gene gene719 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0706 Afer_0707 Afer_0707 Afer_0707 713011 713370 + alkylhydroperoxidase like protein%2C AhpD family TIGRFAM: alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase~KEGG: rha:RHA1_ro11235 carboxymuconolactone decarboxylase gene gene720 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0707 Afer_0708 Afer_0708 Afer_0708 713352 714143 - RimK domain protein ATP-grasp PFAM: RimK domain protein ATP-grasp%3B protein of unknown function DUF201~KEGG: mpn:MPN015 hypothetical protein gene gene721 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0708 Afer_0709 Afer_0709 Afer_0709 714140 714979 - alpha-L-glutamate ligase%2C RimK family TIGRFAM: alpha-L-glutamate ligase%2C RimK family~PFAM: RimK domain protein ATP-grasp~KEGG: oih:OB2059 hypothetical protein gene gene722 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0709 Afer_0710 Afer_0710 Afer_0710 715064 715720 + hypothetical protein KEGG: reh:H16_A3625 predicted alpha/beta hydrolase BEM46 gene gene723 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0710 Afer_0711 Afer_0711 Afer_0711 715717 716412 - thiamine-phosphate pyrophosphorylase KEGG: ace:Acel_0990 thiamine-phosphate pyrophosphorylase~TIGRFAM: thiamine-phosphate pyrophosphorylase~PFAM: thiamine monophosphate synthase gene gene724 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0711 Afer_0712 Afer_0712 Afer_0712 716409 716996 - HhH-GPD family protein TIGRFAM: HhH-GPD family protein~PFAM: HhH-GPD family protein~KEGG: sma:SAV_4172 hypothetical protein gene gene725 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0712 Afer_0713 Afer_0713 Afer_0713 717041 719779 - 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit%2C homodimeric type~KEGG: fra:Francci3_3057 pyruvate dehydrogenase subunit E1 gene gene726 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0713 Afer_0714 Afer_0714 Afer_0714 719836 720282 + ribonuclease H PFAM: ribonuclease H~KEGG: nca:Noca_0418 ribonuclease H gene gene727 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0714 Afer_0715 Afer_0715 Afer_0715 720319 721077 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: xau:Xaut_4664 short-chain dehydrogenase/reductase SDR gene gene728 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0715 Afer_0716 Afer_0716 Afer_0716 721122 722042 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: mpa:MAP3260 hypothetical protein gene gene729 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0716 Afer_0717 Afer_0717 Afer_0717 722123 723502 + dihydrolipoamide dehydrogenase TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase~KEGG: ace:Acel_0936 dihydrolipoamide dehydrogenase gene gene730 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0717 Afer_0718 Afer_0718 Afer_0718 723495 725117 + catalytic domain of components of various dehydrogenase complexes PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain- containing protein%3B E3 binding domain protein~KEGG: fre:Franean1_1779 2-oxoglutarate dehydrogenase E2 component gene gene731 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0718 Afer_0719 Afer_0719 Afer_0719 725114 726721 + lipoic acid synthetase KEGG: min:Minf_1525 lipoate synthase~TIGRFAM: lipoic acid synthetase%3B lipoate-protein ligase B~PFAM: biotin/lipoate A/B protein ligase%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene732 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0719 Afer_0720 Afer_0720 Afer_0720 726718 727839 + peptidase M24 PFAM: peptidase M24%3B creatinase~KEGG: sma:SAV_2161 peptidase gene gene733 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0720 Afer_0721 Afer_0721 Afer_0721 727905 729083 + peptidase S1 and S6 chymotrypsin/Hap PFAM: peptidase S1 and S6 chymotrypsin/Hap%3B PDZ/DHR/GLGF domain protein~SMART: PDZ/DHR/GLGF domain protein~KEGG: mxa:MXAN_2995 peptidase%2C S1C (protease Do) subfamily gene gene734 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0721 Afer_0722 Afer_0722 Afer_0722 729095 729664 - ATP/cobalamin adenosyltransferase TIGRFAM: ATP/cobalamin adenosyltransferase~PFAM: cobalamin adenosyltransferase~KEGG: pzu:PHZ_c3149 hypothetical protein gene gene735 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0722 Afer_0723 Afer_0723 Afer_0723 729699 733154 + methionine synthase TIGRFAM: methionine synthase~PFAM: homocysteine S-methyltransferase%3B Methionine synthase B12-binding module cap domain protein%3B cobalamin B12-binding domain protein%3B dihydropteroate synthase DHPS%3B Vitamin B12 dependent methionine synthase activation region~KEGG: saq:Sare_2325 methionine synthase gene gene736 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0723 Afer_0724 Afer_0724 Afer_0724 733236 734603 + Leucyl aminopeptidase PFAM: peptidase M17 leucyl aminopeptidase domain protein~KEGG: rba:RB12107 cytosol aminopeptidase gene gene737 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0724 Afer_0725 Afer_0725 Afer_0725 734551 735135 - hypothetical protein gene gene738 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0725 Afer_0726 Afer_0726 Afer_0726 735270 736850 - methylmalonyl-CoA mutase%2C large subunit KEGG: rxy:Rxyl_1283 methylmalonyl-CoA mutase~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: methylmalonyl-CoA mutase gene gene739 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0726 Afer_0727 Afer_0727 Afer_0727 737019 737324 + transcriptional coactivator/pterin dehydratase KEGG: cau:Caur_3165 transcriptional coactivator/pterin dehydratase gene gene740 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0727 Afer_0728 Afer_0728 Afer_0728 737364 738530 - UBA/THIF-type NAD/FAD binding protein PFAM: UBA/THIF-type NAD/FAD binding protein%3B MoeZ/MoeB domain protein%3B Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: mxa:MXAN_2588 molybdopterin biosynthesis protein MoeB gene gene741 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0728 Afer_0729 Afer_0729 Afer_0729 738533 739195 - nitroreductase PFAM: nitroreductase~KEGG: kra:Krad_1547 nitroreductase gene gene742 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0729 Afer_0730 Afer_0730 Afer_0730 739200 740966 - Carbamoyl-phosphate synthase L chain ATP- binding PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B biotin carboxylase domain protein%3B biotin/lipoyl attachment domain-containing protein%3B Carbamoyl-phosphate synthetase large chain domain protein~KEGG: kra:Krad_3912 carbamoyl-phosphate synthase L chain ATP-binding gene gene743 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0730 Afer_0731 Afer_0731 Afer_0731 741031 741807 + biotin/acetyl-CoA-carboxylase ligase TIGRFAM: biotin/acetyl-CoA-carboxylase ligase~PFAM: biotin/lipoate A/B protein ligase~KEGG: rpb:RPB_3299 biotin--acetyl-CoA-carboxylase ligase gene gene744 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0731 Afer_0732 Afer_0732 Afer_0732 741804 742943 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: ace:Acel_0405 butyryl-CoA dehydrogenase gene gene745 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0732 Afer_0733 Afer_0733 Afer_0733 742973 744040 + glucose-1-phosphate thymidyltransferase TIGRFAM: glucose-1-phosphate thymidyltransferase~PFAM: Nucleotidyl transferase~KEGG: fal:FRAAL1228 glucose-1-phosphate thymidylyltransferase (dTDP-glucose synthase) (dTDP- glucose pyrophosphorylase) (sugar-nucleotidylation enzyme) gene gene746 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0733 Afer_0734 Afer_0734 Afer_0734 744117 745124 + dTDP-glucose 4%2C6-dehydratase TIGRFAM: dTDP-glucose 4%2C6-dehydratase~PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B polysaccharide biosynthesis protein CapD%3B short-chain dehydrogenase/reductase SDR%3B dTDP-4-dehydrorhamnose reductase~KEGG: fra:Francci3_1669 dTDP-glucose 4%2C6- dehydratase gene gene747 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0734 Afer_0735 Afer_0735 Afer_0735 745121 745981 + dTDP-4-dehydrorhamnose reductase KEGG: ace:Acel_0416 dTDP-4-dehydrorhamnose reductase~TIGRFAM: dTDP-4-dehydrorhamnose reductase~PFAM: dTDP-4-dehydrorhamnose reductase%3B polysaccharide biosynthesis protein CapD%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B NAD-dependent epimerase/dehydratase gene gene748 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0735 Afer_0736 Afer_0736 Afer_0736 745974 746819 + putative dTDP-rhamnosyl transferase KEGG: sen:SACE_6472 putative dTDP-rhamnosyl transferase gene gene749 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0736 Afer_0737 Afer_0737 Afer_0737 746840 747478 + hypothetical protein KEGG: similar to nucleoporin 214kDa gene gene750 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0737 Afer_0738 Afer_0738 Afer_0738 747517 748557 + Nucleotidyl transferase PFAM: Nucleotidyl transferase~KEGG: rxy:Rxyl_1624 nucleotidyl transferase gene gene751 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0738 Afer_0739 Afer_0739 Afer_0739 748554 749534 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B Male sterility domain%3B polysaccharide biosynthesis protein CapD%3B short- chain dehydrogenase/reductase SDR%3B dTDP-4-dehydrorhamnose reductase~KEGG: sth:STH2715 UDP-glucose 4-epimerase gene gene752 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0739 Afer_0740 Afer_0740 Afer_0740 749682 750380 - F420-dependent oxidoreductase TIGRFAM: F420-dependent oxidoreductase~PFAM: protein of unknown function DUF129~KEGG: sco:SCO3037 F420-0--gamma-glutamyl ligase gene gene753 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0740 Afer_0741 Afer_0741 Afer_0741 750377 751342 - LPPG domain protein containing protein TIGRFAM: LPPG domain protein containing protein~PFAM: protein of unknown function UPF0052 and CofD~KEGG: rxy:Rxyl_0958 LPPG:Fo 2-phospho-L-lactate transferase gene gene754 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0741 Afer_0742 Afer_0742 Afer_0742 751402 752505 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: fre:Franean1_5894 glycosyl transferase group 1 gene gene755 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0742 Afer_0743 Afer_0743 Afer_0743 752502 753566 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: ace:Acel_0448 glycosyl transferase%2C group 1 gene gene756 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0743 Afer_0744 Afer_0744 Afer_0744 753559 754650 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: fra:Francci3_0735 glycosyl transferase%2C group 1 gene gene757 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0744 Afer_0745 Afer_0745 Afer_0745 754662 755588 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B dTDP-4- dehydrorhamnose reductase~KEGG: afe:Lferr_2889 NAD-dependent epimerase/dehydratase gene gene758 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0745 Afer_0746 Afer_0746 Afer_0746 755601 758456 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ace:Acel_0460 glycosyl transferase family protein gene gene759 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0746 Afer_0747 Afer_0747 Afer_0747 758453 759871 + hypothetical protein KEGG: aau:AAur_1312 hypothetical protein gene gene760 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0747 Afer_0748 Afer_0748 Afer_0748 759868 760368 - hypothetical protein KEGG: LOC100072155%3B hypothetical protein LOC100072155 gene gene761 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0748 Afer_0749 Afer_0749 Afer_0749 760365 761030 - bifunctional deaminase-reductase domain protein PFAM: bifunctional deaminase-reductase domain protein~KEGG: ace:Acel_1375 deaminase-reductase domain- containing protein gene gene762 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0749 Afer_0750 Afer_0750 Afer_0750 761064 762032 + pseudogene gene763 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0750 Afer_0751 Afer_0751 Afer_0751 762048 763136 - pseudogene gene764 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0751 Afer_0752 Afer_0752 Afer_0752 763226 764257 + conserved hypothetical protein KEGG: sfu:Sfum_1834 hypothetical protein gene gene765 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0752 Afer_0753 Afer_0753 Afer_0753 764333 766009 + methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~SMART: chemotaxis sensory transducer%3B histidine kinase HAMP region domain protein~KEGG: nca:Noca_2984 chemotaxis sensory transducer gene gene766 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0753 Afer_0754 Afer_0754 Afer_0754 765990 766589 - DSBA oxidoreductase PFAM: DSBA oxidoreductase~KEGG: fal:FRAAL2315 hypothetical protein gene gene767 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0754 Afer_0755 Afer_0755 Afer_0755 766645 767064 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: stp:Strop_1261 NUDIX hydrolase gene gene768 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0755 Afer_0756 Afer_0756 Afer_0756 767057 767629 - phosphoesterase PA-phosphatase related PFAM: phosphoesterase PA-phosphatase related~SMART: phosphoesterase PA-phosphatase related~KEGG: fra:Francci3_3059 phosphoesterase%2C PA- phosphatase related gene gene769 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0756 Afer_0757 Afer_0757 Afer_0757 767626 768405 - conserved hypothetical protein KEGG: sgr:SGR_5851 hypothetical protein gene gene770 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0757 Afer_0758 Afer_0758 Afer_0758 768415 769314 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: predicted protein gene gene771 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0758 Afer_0759 Afer_0759 Afer_0759 769322 769930 + SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: ank:AnaeK_1303 SNARE associated Golgi protein gene gene772 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0759 Afer_0760 Afer_0760 Afer_0760 770477 770869 + protein of unknown function DUF156 PFAM: protein of unknown function DUF156~KEGG: ace:Acel_0543 hypothetical protein gene gene775 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0760 Afer_0761 Afer_0761 Afer_0761 770911 772419 + trigger factor TIGRFAM: trigger factor~PFAM: trigger factor domain%3B trigger factor domain protein~KEGG: bcl:ABC2637 trigger factor gene gene776 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0761 Afer_0762 Afer_0762 Afer_0762 772430 773044 + Endopeptidase Clp PFAM: peptidase S14 ClpP~KEGG: chy:CHY_0325 ATP-dependent Clp protease%2C proteolytic subunit ClpP gene gene777 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0762 Afer_0763 Afer_0763 Afer_0763 773122 774381 + ATP-dependent Clp protease%2C ATP-binding subunit ClpX KEGG: fre:Franean1_5272 ATP-dependent protease ATP- binding subunit~TIGRFAM: ATP-dependent Clp protease%2C ATP-binding subunit ClpX~PFAM: ATPase AAA-2 domain protein%3B zinc finger C4 domain protein%3B AAA ATPase central domain protein~SMART: AAA ATPase gene gene778 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0763 Afer_0764 Afer_0764 Afer_0764 774378 775679 + FolC bifunctional protein TIGRFAM: FolC bifunctional protein~PFAM: Mur ligase middle domain protein~KEGG: dra:DR_2575 folyl-polyglutamate synthetase gene gene779 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0764 Afer_0765 Afer_0765 Afer_0765 775694 776104 + Nucleoside-diphosphate kinase KEGG: ace:Acel_0747 nucleoside diphosphate kinase~PFAM: nucleoside diphosphate kinase~SMART: nucleoside diphosphate kinase gene gene780 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0765 Afer_0766 Afer_0766 Afer_0766 776161 777189 + cell shape determining protein%2C MreB/Mrl family TIGRFAM: cell shape determining protein%2C MreB/Mrl family~PFAM: cell shape determining protein MreB/Mrl%3B cell division protein FtsA~KEGG: fre:Franean1_5269 cell shape determining protein MreB gene gene781 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0766 Afer_0767 Afer_0767 Afer_0767 777198 778040 + rod shape-determining protein MreC TIGRFAM: rod shape-determining protein MreC~PFAM: Rod shape-determining protein MreC~KEGG: drm:Dred_2547 rod shape-determining protein MreC gene gene782 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0767 Afer_0768 Afer_0768 Afer_0768 778037 778540 + rod shape-determining protein MreD TIGRFAM: rod shape-determining protein MreD~KEGG: aoe:Clos_1763 hypothetical protein gene gene783 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0768 Afer_0769 Afer_0769 Afer_0769 778627 780561 + penicillin-binding protein 2 KEGG: fre:Franean1_5266 peptidoglycan glycosyltransferase~TIGRFAM: penicillin-binding protein 2~PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerization domain gene gene784 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0769 Afer_0770 Afer_0770 Afer_0770 781317 782690 + ribonuclease%2C Rne/Rng family TIGRFAM: ribonuclease%2C Rne/Rng family~KEGG: tfu:Tfu_2183 ribonuclease E and G gene gene785 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0770 Afer_0771 Afer_0771 Afer_0771 782704 783039 + ribosomal protein L21 TIGRFAM: ribosomal protein L21~PFAM: ribosomal protein L21~KEGG: pac:PPA0827 50S ribosomal protein L21 gene gene786 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0771 Afer_0772 Afer_0772 Afer_0772 783042 783308 + ribosomal protein L27 TIGRFAM: ribosomal protein L27~PFAM: ribosomal protein L27~KEGG: krh:KRH_11310 50S ribosomal protein L27 gene gene787 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0772 Afer_0773 Afer_0773 Afer_0773 783322 784590 + GTP-binding protein Obg/CgtA TIGRFAM: GTP-binding protein Obg/CgtA~PFAM: GTP1/OBG sub domain protein%3B GTP-binding protein HSR1-related%3B GTP1/OBG domain protein~KEGG: ace:Acel_0758 GTPase ObgE gene gene788 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0773 Afer_0774 Afer_0774 Afer_0774 784587 785675 + glutamate 5-kinase KEGG: neu:NE1290 gamma-glutamyl kinase~TIGRFAM: glutamate 5-kinase~PFAM: aspartate/glutamate/uridylate kinase%3B PUA domain containing protein~SMART: PUA domain containing protein gene gene789 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0774 Afer_0775 Afer_0775 Afer_0775 785807 786187 - conserved hypothetical protein KEGG: mse:Msed_0347 hypothetical protein gene gene790 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0775 Afer_0776 Afer_0776 Afer_0776 786270 786791 - protein of unknown function DUF664 PFAM: protein of unknown function DUF664~KEGG: sco:SCO1340 hypothetical protein gene gene791 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0776 Afer_0777 Afer_0777 Afer_0777 786934 787659 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: acr:Acry_2201 ABC transporter related gene gene792 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0777 Afer_0778 Afer_0778 Afer_0778 787634 788350 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: acr:Acry_2202 ABC transporter related gene gene793 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0778 Afer_0779 Afer_0779 Afer_0779 788337 789347 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: acr:Acry_2203 inner-membrane translocator gene gene794 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0779 Afer_0780 Afer_0780 Afer_0780 789340 790218 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: acr:Acry_2204 inner-membrane translocator gene gene795 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0780 Afer_0781 Afer_0781 Afer_0781 790295 791584 - extracellular ligand-binding receptor KEGG: acr:Acry_2205 extracellular ligand-binding receptor gene gene796 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0781 Afer_0782 Afer_0782 Afer_0782 791924 793201 + gamma-glutamyl phosphate reductase TIGRFAM: gamma-glutamyl phosphate reductase~PFAM: Aldehyde Dehydrogenase~KEGG: ace:Acel_0761 gamma-glutamyl phosphate reductase gene gene797 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0782 Afer_0783 Afer_0783 Afer_0783 793227 794078 + ATPase associated with various cellular activities AAA_5 PFAM: ATPase associated with various cellular activities AAA_5%3B ATPase associated with various cellular activities AAA_3~SMART: AAA ATPase~KEGG: sma:SAV_1448 MoxR-like ATPase gene gene798 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0783 Afer_0784 Afer_0784 Afer_0784 794075 795409 + VWA containing CoxE family protein PFAM: VWA containing CoxE family protein~KEGG: fre:Franean1_5254 VWA containing CoxE family protein gene gene799 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0784 Afer_0785 Afer_0785 Afer_0785 795514 797391 - hypothetical protein KEGG: cbe:Cbei_2588 collagen triple helix repeat gene gene800 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0785 Afer_0786 Afer_0786 Afer_0786 797518 798378 - 5-carboxymethyl-2-hydroxymuconateDelta-isomerase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: fal:FRAAL6170 2-hydroxyhepta-2%2C4-diene-1%2C7- dioate isomerase (HhdD isomerase)/5-carboxymethyl-2-oxo- hex-3-ene-1%2C7-dioate decarboxylase (OPET decarboxylase) gene gene801 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0786 Afer_0787 Afer_0787 Afer_0787 798417 798770 - hypothetical protein gene gene802 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0787 Afer_0788 Afer_0788 Afer_0788 798910 799479 + yecA family protein TIGRFAM: yecA family protein~KEGG: cli:Clim_0950 YecA family protein gene gene803 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0788 Afer_0789 Afer_0789 Afer_0789 799476 799994 - Iojap-related protein PFAM: Iojap-related protein~KEGG: ank:AnaeK_0226 iojap-like protein gene gene804 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0789 Afer_0790 Afer_0790 Afer_0790 800216 800836 - nicotinate (nicotinamide) nucleotide adenylyltransferase KEGG: dsy:DSY3161 nicotinic acid mononucleotide adenylyltransferase~TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: cytidylyltransferase gene gene805 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0790 Afer_0791 Afer_0791 Afer_0791 800836 801759 - Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: fal:FRAAL2800 hypothetical protein gene gene806 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0791 Afer_0792 Afer_0792 Afer_0792 801844 803199 + phospho-2-dehydro-3-deoxyheptonate aldolase KEGG: ace:Acel_0984 3-deoxy-D-arabinoheptulosonate- 7-phosphate synthase~TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase~PFAM: DAHP synthetase class II gene gene807 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0792 Afer_0793 Afer_0793 Afer_0793 803273 804466 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: pto:PTO1278 transporter gene gene808 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0793 Afer_0794 Afer_0794 Afer_0794 804528 804899 - conserved hypothetical protein KEGG: mmi:MMAR_0699 hypothetical protein gene gene809 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0794 Afer_0795 Afer_0795 Afer_0795 805156 805932 - hypothetical protein gene gene810 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0795 Afer_0796 Afer_0796 Afer_0796 806430 807950 + histidine ammonia-lyase KEGG: eba:ebA5742 histidine ammonia-lyase~TIGRFAM: histidine ammonia-lyase~PFAM: phenylalanine/histidine ammonia-lyase gene gene812 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0796 Afer_0797 Afer_0797 Afer_0797 807962 808711 - acyl-ACP thioesterase PFAM: acyl-ACP thioesterase~KEGG: nfa:nfa20140 hypothetical protein gene gene813 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0797 Afer_0798 Afer_0798 Afer_0798 808721 810379 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: scl:sce5736 AMP-dependent synthetase and ligase gene gene814 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0798 Afer_0799 Afer_0799 Afer_0799 810437 811624 - cobalamin (vitamin B12) biosynthesis CbiX protein PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein~KEGG: sco:SCO1858 hypothetical protein gene gene815 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0799 Afer_0800 Afer_0800 Afer_0800 811621 812205 - Precorrin-8X methylmutase CbiC/CobH PFAM: Precorrin-8X methylmutase CbiC/CobH~KEGG: rxy:Rxyl_0645 precorrin-8X methylmutase gene gene816 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0800 Afer_0801 Afer_0801 Afer_0801 812226 812375 - pseudogene gene817 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0801 Afer_0802 Afer_0802 Afer_0802 812384 814027 - precorrin-3B C17-methyltransferase TIGRFAM: precorrin-3B C17-methyltransferase~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase%3B cobalamin (vitamin B12) biosynthesis CbiG protein~KEGG: stp:Strop_2520 precorrin-3B C17- methyltransferase gene gene818 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0802 Afer_0803 Afer_0803 Afer_0803 814215 815426 + Fumarylacetoacetase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: fre:Franean1_3789 fumarylacetoacetase gene gene819 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0803 Afer_0804 Afer_0804 Afer_0804 815481 816002 + cob(I)alamin adenosyltransferase KEGG: tth:TT_P0002 cob(I)alamin adenosyltransferase~TIGRFAM: cob(I)alamin adenosyltransferase~PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP gene gene820 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0804 Afer_0805 Afer_0805 Afer_0805 815999 817324 + Cobyrinic acid ac-diamide synthase PFAM: Cobyrinic acid ac-diamide synthase%3B CobB/CobQ domain protein glutamine amidotransferase~KEGG: rxy:Rxyl_0638 cobyrinic acid a%2Cc-diamide synthase gene gene821 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0805 Afer_0806 Afer_0806 Afer_0806 817335 818156 + Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase~KEGG: rxy:Rxyl_0640 precorrin-4 C11- methyltransferase gene gene822 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0806 Afer_0807 Afer_0807 Afer_0807 818164 819225 + cobalamin biosynthesis protein CbiD TIGRFAM: cobalamin biosynthesis protein CbiD~PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein~KEGG: rxy:Rxyl_0641 cobalt-precorrin-6A synthase gene gene823 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0807 Afer_0808 Afer_0808 Afer_0808 819222 820394 + precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit TIGRFAM: precorrin-6y C5%2C15-methyltransferase (decarboxylating)%2C CbiE subunit~PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase%3B protein-L- isoaspartate(D-aspartate) O-methyltransferase~KEGG: syx:SynWH7803_1707 precorrin-6Y methylase gene gene824 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0808 Afer_0809 Afer_0809 Afer_0809 820955 821617 + conserved hypothetical protein KEGG: rha:RHA1_ro01772 hypothetical protein gene gene825 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0809 Afer_0810 Afer_0810 Afer_0810 821863 822147 + pseudogene gene826 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0810 Afer_0811 Afer_0811 Afer_0811 822464 824440 + Endothelin-converting enzyme 1 PFAM: peptidase M13%3B peptidase M13 neprilysin~KEGG: lxx:Lxx01010 metallopeptidase gene gene827 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0811 Afer_0812 Afer_0812 Afer_0812 824531 825712 + homogentisate 12-dioxygenase PFAM: homogentisate 12-dioxygenase~KEGG: stp:Strop_4258 homogentisate 1%2C2-dioxygenase gene gene828 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0812 Afer_0813 Afer_0813 Afer_0813 825709 826677 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: sen:SACE_4081 beta lactamase gene gene829 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0813 Afer_0814 Afer_0814 Afer_0814 826674 828251 + monooxygenase FAD-binding PFAM: monooxygenase FAD-binding%3B FAD dependent oxidoreductase~KEGG: sen:SACE_3057 pentachlorophenol monooxygenase gene gene830 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0814 Afer_0815 Afer_0815 Afer_0815 828263 829714 + cobyric acid synthase CobQ TIGRFAM: cobyric acid synthase CobQ~PFAM: CobB/CobQ domain protein glutamine amidotransferase%3B Cobyrinic acid ac-diamide synthase~KEGG: rha:RHA1_ro06605 cobyric acid synthase gene gene831 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0815 Afer_0816 Afer_0816 Afer_0816 829765 833292 + cobaltochelatase%2C CobN subunit KEGG: rxy:Rxyl_0635 cobaltochelatase~TIGRFAM: cobaltochelatase%2C CobN subunit~PFAM: CobN/magnesium chelatase gene gene832 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0816 Afer_0817 Afer_0817 Afer_0817 833289 835112 + Magnesium chelatase KEGG: nfa:nfa40830 putative magnesium chelatase subunit~PFAM: ATPase associated with various cellular activities AAA_5%3B AAA ATPase central domain protein%3B von Willebrand factor type A%3B magnesium chelatase ChlI subunit~SMART: von Willebrand factor type A%3B AAA ATPase gene gene833 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0817 Afer_0818 Afer_0818 Afer_0818 835088 835735 - Uracil-DNA glycosylase superfamily PFAM: Uracil-DNA glycosylase superfamily~KEGG: ank:AnaeK_3689 uracil-DNA glycosylase superfamily protein gene gene834 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0818 Afer_0819 Afer_0819 Afer_0819 835827 836162 + hypothetical protein KEGG: cno:NT01CX_1670 hypothetical protein gene gene835 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0819 Afer_0820 Afer_0820 Afer_0820 836177 839371 - diguanylate cyclase/phosphodiesterase KEGG: met:M446_2712 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene836 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0820 Afer_0821 Afer_0821 Afer_0821 839502 842459 + formate dehydrogenase%2C alpha subunit TIGRFAM: formate dehydrogenase%2C alpha subunit~PFAM: molybdopterin oxidoreductase%3B 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B ferredoxin%3B molybdopterin oxidoreductase Fe4S4 region%3B molydopterin dinucleotide-binding region~KEGG: dge:Dgeo_2746 formate dehydrogenase%2C alpha subunit gene gene837 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0821 Afer_0822 Afer_0822 Afer_0822 842452 842844 + putative chromosome segregation protein KEGG: sgr:SGR_1901 putative chromosome segregation protein gene gene838 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0822 Afer_0823 Afer_0823 Afer_0823 843062 844138 + pyruvate dehydrogenase (acetyl-transferring) E1 component%2C alpha subunit KEGG: hsl:OE4113F putative branched-chain amino acid dehydrogenase E1 component alpha subunit~TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component%2C alpha subunit~PFAM: dehydrogenase E1 component gene gene839 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0823 Afer_0824 Afer_0824 Afer_0824 844138 845118 + Transketolase central region PFAM: Transketolase central region%3B Transketolase domain protein~KEGG: gka:GK3216 pyruvate dehydrogenase E1 (lipoamide) beta subunit gene gene840 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0824 Afer_0825 Afer_0825 Afer_0825 845184 846467 + catalytic domain of components of various dehydrogenase complexes PFAM: catalytic domain of components of various dehydrogenase complexes%3B biotin/lipoyl attachment domain- containing protein%3B E3 binding domain protein~KEGG: sth:STH413 pyruvate dehydrogenase E2 gene gene841 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0825 Afer_0826 Afer_0826 Afer_0826 846467 847897 + dihydrolipoamide dehydrogenase TIGRFAM: dihydrolipoamide dehydrogenase~PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase%3B FAD dependent oxidoreductase~KEGG: gka:GK1061 dihydrolipoamide dehydrogenase gene gene842 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0826 Afer_0827 Afer_0827 Afer_0827 847928 849166 - putative acetyl-CoA hydrolase KEGG: fal:FRAAL3473 putative acetyl-CoA hydrolase gene gene843 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0827 Afer_0828 Afer_0828 Afer_0828 849190 850209 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: rxy:Rxyl_2377 conserved hypothetical protein 374 gene gene844 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0828 Afer_0829 Afer_0829 Afer_0829 850508 851776 + protein of unknown function UPF0118 PFAM: protein of unknown function UPF0118~KEGG: kra:Krad_0518 hypothetical protein gene gene845 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0829 Afer_0830 Afer_0830 Afer_0830 852279 854060 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: nca:Noca_1551 hypothetical protein gene gene846 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0830 Afer_0831 Afer_0831 Afer_0831 854100 854945 + hypothetical protein KEGG: cjk:jk1999 hypothetical protein gene gene847 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0831 Afer_0832 Afer_0832 Afer_0832 854942 855619 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: mjl:Mjls_4806 alpha/beta hydrolase fold gene gene848 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0832 Afer_0833 Afer_0833 Afer_0833 855765 856058 + transcription factor WhiB PFAM: transcription factor WhiB~KEGG: ace:Acel_0560 transcription factor WhiB gene gene849 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0833 Afer_0834 Afer_0834 Afer_0834 856305 857114 - formate dehydrogenase subunit FdhD PFAM: formate dehydrogenase subunit FdhD~KEGG: ttj:TTHB196 putative protein required for formate dehydrogenase activity gene gene850 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0834 Afer_0835 Afer_0835 Afer_0835 857193 857801 + conserved hypothetical protein KEGG: saq:Sare_3891 hypothetical protein gene gene851 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0835 Afer_0836 Afer_0836 Afer_0836 857812 858513 - protein of unknown function DUF125 transmembrane PFAM: protein of unknown function DUF125 transmembrane~KEGG: afw:Anae109_0752 hypothetical protein gene gene852 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0836 Afer_0837 Afer_0837 Afer_0837 858579 858950 + hypothetical protein gene gene853 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0837 Afer_0838 Afer_0838 Afer_0838 859218 860342 - MscS Mechanosensitive ion channel PFAM: MscS Mechanosensitive ion channel~KEGG: bcm:Bcenmc03_1911 MscS mechanosensitive ion channel gene gene854 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0838 Afer_0839 Afer_0839 Afer_0839 860438 860899 + MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: sma:SAV_6603 hypothetical protein gene gene855 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0839 Afer_0840 Afer_0840 Afer_0840 860933 861787 + Polyphosphate:AMP phosphotransferase PFAM: protein of unknown function DUF344~KEGG: mpt:Mpe_A3289 polyphosphate:AMP phosphotransferase gene gene856 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0840 Afer_0841 Afer_0841 Afer_0841 861784 861984 + hypothetical protein gene gene857 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0841 Afer_0842 Afer_0842 Afer_0842 862040 862747 + ubiquinone/menaquinone biosynthesis methyltransferase TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase~PFAM: Methyltransferase type 11%3B Methionine biosynthesis MetW protein%3B UbiE/COQ5 methyltransferase%3B Methyltransferase type 12~KEGG: sru:SRU_0824 ubiquinone/menaquinone biosynthesis methyltransferase UbiE gene gene858 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0842 Afer_0843 Afer_0843 Afer_0843 862744 863898 + Chorismate binding-like protein PFAM: Chorismate binding-like~KEGG: bcj:BCAM2235 putative pyochelin biosynthetic protein PchA gene gene859 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0843 Afer_0844 Afer_0844 Afer_0844 863891 866728 + excinuclease ABC%2C A subunit KEGG: mbb:BCG_1676 excinuclease ABC subunit A~TIGRFAM: excinuclease ABC%2C A subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene860 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0844 Afer_0845 Afer_0845 Afer_0845 866725 868587 + excinuclease ABC%2C C subunit KEGG: mbb:BCG_1481 excinuclease ABC subunit C~TIGRFAM: excinuclease ABC%2C C subunit~PFAM: excinuclease ABC C subunit domain protein%3B Excinuclease ABC C subunit domain protein%3B UvrB/UvrC protein~SMART: Excinuclease ABC C subunit domain protein gene gene861 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0845 Afer_0846 Afer_0846 Afer_0846 868584 869339 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Methyltransferase type 12~KEGG: bbt:BBta_2180 putative methyltransferase gene gene862 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0846 Afer_0847 Afer_0847 Afer_0847 869336 870193 + conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: ace:Acel_1111 hypothetical protein gene gene863 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0847 Afer_0848 Afer_0848 Afer_0848 870190 871086 + protein of unknown function UPF0052 and CofD PFAM: protein of unknown function UPF0052 and CofD~KEGG: fal:FRAAL4591 hypothetical protein gene gene864 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0848 Afer_0849 Afer_0849 Afer_0849 871180 872205 + glyceraldehyde-3-phosphate dehydrogenase%2C type I KEGG: kra:Krad_2931 glyceraldehyde-3-phosphate dehydrogenase%2C type I~TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase%2C type I~PFAM: glyceraldehyde 3-phosphate dehydrogenase gene gene865 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0849 Afer_0850 Afer_0850 Afer_0850 872205 873341 + Phosphoglycerate kinase PFAM: phosphoglycerate kinase~KEGG: rxy:Rxyl_2004 phosphoglycerate kinase gene gene866 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0850 Afer_0851 Afer_0851 Afer_0851 873338 874165 + triosephosphate isomerase KEGG: ace:Acel_1115 phosphoglycerate kinase.%2C triose-phosphate isomerase~TIGRFAM: triosephosphate isomerase~PFAM: triosephosphate isomerase gene gene867 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0851 Afer_0852 Afer_0852 Afer_0852 874195 874422 + preprotein translocase%2C SecG subunit TIGRFAM: preprotein translocase%2C SecG subunit~PFAM: Preprotein translocase SecG subunit~KEGG: cmi:CMM_1741 preprotein translocase subunit SecG gene gene868 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0852 Afer_0853 Afer_0853 Afer_0853 874801 875496 + PAS sensor protein KEGG: kra:Krad_1568 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)~TIGRFAM: PAS sensor protein~PFAM: PAS fold-4 domain protein~SMART: PAS domain containing protein gene gene869 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0853 Afer_0854 Afer_0854 Afer_0854 875503 876174 + putative signal transduction protein PFAM: Metal-dependent hydrolase HDOD~KEGG: kra:Krad_1569 putative signal transduction protein gene gene870 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0854 Afer_0855 Afer_0855 Afer_0855 876211 877836 - ErfK/YbiS/YcfS/YnhG family protein PFAM: ErfK/YbiS/YcfS/YnhG family protein~KEGG: afe:Lferr_1745 hypothetical protein gene gene871 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0855 Afer_0856 Afer_0856 Afer_0856 877952 878551 + multiple antibiotic resistance (MarC)-related protein PFAM: multiple antibiotic resistance (MarC)-related protein~KEGG: ace:Acel_1795 multiple antibiotic resistance (MarC)-related proteins gene gene872 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0856 Afer_0857 Afer_0857 Afer_0857 878742 879043 - pseudogene gene873 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0857 Afer_0858 Afer_0858 Afer_0858 879458 880375 - cation diffusion facilitator family transporter TIGRFAM: cation diffusion facilitator family transporter~PFAM: cation efflux protein~KEGG: gsu:GSU0487 cation efflux family protein gene gene874 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0858 Afer_0859 Afer_0859 Afer_0859 880595 881257 + Peroxidase PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: xau:Xaut_2363 peroxidase gene gene875 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0859 Afer_0860 Afer_0860 Afer_0860 881462 882490 + Luciferase-like monooxygenase PFAM: Luciferase-like monooxygenase~KEGG: sco:SCO6786 oxidoreductase gene gene876 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0860 Afer_0861 Afer_0861 Afer_0861 882508 883581 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: fal:FRAAL2169 putative glycosyl transferase gene gene877 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0861 Afer_0862 Afer_0862 Afer_0862 883551 884030 + conserved hypothetical protein KEGG: mar:MAE_29540 hypothetical protein gene gene878 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0862 Afer_0863 Afer_0863 Afer_0863 884753 885319 - Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III~SMART: Exonuclease~KEGG: cjk:jk0518 oligoribonuclease gene gene879 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0863 Afer_0864 Afer_0864 Afer_0864 885376 886191 + Dolichyl-phosphate beta-D-mannosyltransferase PFAM: glycosyl transferase family 2~KEGG: sen:SACE_2289 dolichyl-phosphate beta-D- mannosyltransferase gene gene880 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0864 Afer_0865 Afer_0865 Afer_0865 886173 886613 + deoxyuridine 5'-triphosphate nucleotidohydrolase Dut KEGG: ckl:CKL_1144 hypothetical protein~TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut~PFAM: deoxyUTP pyrophosphatase gene gene881 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0865 Afer_0866 Afer_0866 Afer_0866 886963 887133 + hypothetical protein gene gene883 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0866 Afer_0867 Afer_0867 Afer_0867 887140 888603 + permease for cytosine/purines uracil thiamine allantoin PFAM: permease for cytosine/purines uracil thiamine allantoin~KEGG: bph:Bphy_6281 permease for cytosine/purines uracil thiamine allantoin gene gene884 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0867 Afer_0868 Afer_0868 Afer_0868 888735 889127 + DoxX family protein PFAM: DoxX family protein~KEGG: dge:Dgeo_2087 DoxX gene gene885 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0868 Afer_0869 Afer_0869 Afer_0869 889332 889511 + hypothetical protein gene gene886 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0869 Afer_0870 Afer_0870 Afer_0870 889525 890511 + serine/threonine protein kinase PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase~SMART: serine/threonine protein kinase%3B tyrosine protein kinase~KEGG: mbn:Mboo_0434 protein kinase gene gene887 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0870 Afer_0871 Afer_0871 Afer_0871 890539 891753 + glutamine synthetase catalytic region PFAM: glutamine synthetase catalytic region~KEGG: blj:BLD_0159 glutamine synthetase gene gene888 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0871 Afer_0872 Afer_0872 Afer_0872 891937 893514 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: mbn:Mboo_0439 amino acid permease-associated region gene gene889 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0872 Afer_0873 Afer_0873 Afer_0873 893598 894446 + protein serine/threonine phosphatase PFAM: Protein phosphatase 2C-like~SMART: protein phosphatase 2C domain protein~KEGG: dra:DR_2513 hypothetical protein gene gene890 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0873 Afer_0874 Afer_0874 Afer_0874 894443 896053 - PEP-utilizing protein PFAM: PEP-utilizing protein%3B PEP-utilising protein mobile region%3B PEP-utilising protein domain protein~KEGG: cmi:CMM_0968 phosphoenolpyruvate--protein phosphatase gene gene891 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0874 Afer_0875 Afer_0875 Afer_0875 896232 897119 + MIP family channel protein TIGRFAM: MIP family channel protein~PFAM: major intrinsic protein~KEGG: sco:SCO4057 transport integral membrane protein gene gene892 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0875 Afer_0876 Afer_0876 Afer_0876 897116 898609 + glycerol kinase TIGRFAM: glycerol kinase~PFAM: carbohydrate kinase FGGY~KEGG: chy:CHY_1839 glycerol kinase gene gene893 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0876 Afer_0877 Afer_0877 Afer_0877 898632 899633 + dihydroxyacetone kinase%2C DhaK subunit KEGG: hmo:HM1_0840 dihydroxyacetone kinase%2C dhak subunit~TIGRFAM: dihydroxyacetone kinase%2C DhaK subunit~PFAM: Dak kinase gene gene894 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0877 Afer_0878 Afer_0878 Afer_0878 899630 900259 + dihydroxyacetone kinase%2C L subunit TIGRFAM: dihydroxyacetone kinase%2C L subunit~PFAM: Dak phosphatase~KEGG: lxx:Lxx09880 dihydroxyacetone kinase gene gene895 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0878 Afer_0879 Afer_0879 Afer_0879 900270 900653 + PTS system fructose subfamily IIA component PFAM: PTS system fructose subfamily IIA component~KEGG: rsa:RSal33209_3182 dihydroxyacetone kinase phosphotransfer protein gene gene896 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0879 Afer_0880 Afer_0880 Afer_0880 900650 902110 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase%3B BFD domain protein [2Fe-2S]-binding domain protein~KEGG: rca:Rcas_4111 FAD dependent oxidoreductase gene gene897 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0880 Afer_0881 Afer_0881 Afer_0881 902107 903138 + hypothetical protein KEGG: rca:Rcas_4112 anaerobic glycerol-3-phosphate dehydrogenase subunit B gene gene898 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0881 Afer_0882 Afer_0882 Afer_0882 903132 904292 + protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein%3B 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: yen:YE0214 sn-glycerol-3-phosphate dehydrogenase subunit C gene gene899 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0882 Afer_0883 Afer_0883 Afer_0883 904289 904900 + glycerol-3-phosphate responsive antiterminator%2C GlpP PFAM: glycerol-3-phosphate responsive antiterminator~KEGG: tte:TTE2004 glycerol-3-phosphate responsive antiterminator (mRNA-binding) gene gene900 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0883 Afer_0884 Afer_0884 Afer_0884 904897 905217 + Phosphotransferase system%2C phosphocarrier protein HPr PFAM: phosphoryl transfer system HPr~KEGG: lsp:Bsph_2351 phosphocarrier protein HPr (histidine-containing protein) gene gene901 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0884 Afer_0885 Afer_0885 Afer_0885 905398 906279 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: saq:Sare_4780 binding-protein-dependent transport systems inner membrane component gene gene902 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0885 Afer_0886 Afer_0886 Afer_0886 906312 908144 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: saq:Sare_4778 extracellular solute-binding protein gene gene903 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0886 Afer_0887 Afer_0887 Afer_0887 908148 909089 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sco:SCO6113 peptide ABC transporter integral membrane protein gene gene904 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0887 Afer_0888 Afer_0888 Afer_0888 909086 909967 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: saq:Sare_4780 binding-protein-dependent transport systems inner membrane component gene gene905 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0888 Afer_0889 Afer_0889 Afer_0889 909964 911427 + FAD dependent oxidoreductase PFAM: FAD dependent oxidoreductase~KEGG: sgr:SGR_1833 putative FAD-dependent oxidoreductase gene gene906 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0889 Afer_0890 Afer_0890 Afer_0890 911440 913512 + oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: stp:Strop_4339 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene907 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0890 Afer_0891 Afer_0891 Afer_0891 913434 914612 - acyltransferase 3 PFAM: acyltransferase 3~KEGG: mxa:MXAN_1049 acyltransferase family protein gene gene908 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0891 Afer_0892 Afer_0892 Afer_0892 914841 915791 - tRNA/rRNA methyltransferase (SpoU) PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: mpa:MAP0820 hypothetical protein gene gene909 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0892 Afer_0893 Afer_0893 Afer_0893 915788 916633 - CHAD domain containing protein PFAM: CHAD domain containing protein~KEGG: afw:Anae109_0571 CHAD domain-containing protein gene gene910 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0893 Afer_0894 Afer_0894 Afer_0894 916676 917458 - HAD-superfamily hydrolase%2C subfamily IIA TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIA~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: pfu:PF0432 putative sugar-catabolism phosphotransferase gene gene911 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0894 Afer_0895 Afer_0895 Afer_0895 917563 918612 + Fructose-bisphosphate aldolase PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase~KEGG: cts:Ctha_2362 fructose-bisphosphate aldolase gene gene912 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0895 Afer_0896 Afer_0896 Afer_0896 918632 919336 - Tetratricopeptide TPR_2 repeat protein PFAM: Tetratricopeptide TPR_2 repeat protein%3B Tetratricopeptide TPR_4~KEGG: stp:Strop_1906 tetratricopeptide TPR_4 gene gene913 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0896 Afer_0897 Afer_0897 Afer_0897 919409 920080 + hypothetical protein KEGG: predicted protein gene gene914 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0897 Afer_0898 Afer_0898 Afer_0898 920111 920842 + hypothetical protein KEGG: LOC100146717%3B hypothetical protein LOC100146717 gene gene915 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0898 Afer_0899 Afer_0899 Afer_0899 920802 921824 - conserved hypothetical protein PFAM: conserved hypothetical protein~KEGG: cya:CYA_0770 hypothetical protein gene gene916 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0899 Afer_0900 Afer_0900 Afer_0900 921821 924094 - Radical SAM domain protein PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~KEGG: rxy:Rxyl_0975 FO synthase gene gene917 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0900 Afer_0901 Afer_0901 Afer_0901 924104 924826 - 6-phosphogluconolactonase/Glucosamine-6-phosphat eisomerase/deaminase-like protein KEGG: ace:Acel_1122 6-phosphogluconolactonase gene gene918 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0901 Afer_0902 Afer_0902 Afer_0902 924936 925235 + hypothetical protein gene gene919 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0902 Afer_0903 Afer_0903 Afer_0903 925249 925455 + hypothetical protein gene gene920 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0903 Afer_0904 Afer_0904 Afer_0904 925455 925667 + hypothetical protein gene gene921 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0904 Afer_0905 Afer_0905 Afer_0905 925664 926554 + tRNA methyltransferase complex GCD14 subunit PFAM: tRNA methyltransferase complex GCD14 subunit%3B protein-L-isoaspartate(D-aspartate) O-methyltransferase~SMART: ribosomal RNA adenine methylase transferase~KEGG: cmi:CMM_1691 putative methyltransferase gene gene922 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0905 Afer_0906 Afer_0906 Afer_0906 926802 927038 - 4Fe-4S ferredoxin iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: saq:Sare_2357 hypothetical protein gene gene923 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0906 Afer_0907 Afer_0907 Afer_0907 927175 928914 + AAA ATPase central domain protein PFAM: AAA ATPase central domain protein~SMART: AAA ATPase~KEGG: tfu:Tfu_1809 vesicle-fusing ATPase gene gene924 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0907 Afer_0908 Afer_0908 Afer_0908 928935 930428 + protein of unknown function DUF245 domain protein PFAM: protein of unknown function DUF245 domain protein%3B protein of unknown function DUF275 domain protein~KEGG: fra:Francci3_2629 hypothetical protein gene gene925 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0908 Afer_0909 Afer_0909 Afer_0909 930451 930645 + protein of unknown function DUF797 PFAM: protein of unknown function DUF797~KEGG: tfu:Tfu_1791 hypothetical protein gene gene926 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0909 Afer_0910 Afer_0910 Afer_0910 930722 931543 + 20S proteasome A and B subunits PFAM: 20S proteasome A and B subunits~KEGG: nca:Noca_2645 proteasome subunit beta gene gene927 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0910 Afer_0911 Afer_0911 Afer_0911 931540 932238 + 20S proteasome A and B subunits PFAM: 20S proteasome A and B subunits~KEGG: kra:Krad_1874 20S proteasome A and B subunits gene gene928 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0911 Afer_0912 Afer_0912 Afer_0912 932239 933606 + protein of unknown function DUF245 domain protein PFAM: protein of unknown function DUF245 domain protein%3B protein of unknown function DUF275 domain protein~KEGG: ace:Acel_1191 hypothetical protein gene gene929 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0912 Afer_0913 Afer_0913 Afer_0913 933606 934136 + signal peptidase I TIGRFAM: signal peptidase I~PFAM: peptidase S24 and S26 domain protein~KEGG: pth:PTH_1717 signal peptidase I gene gene930 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0913 Afer_0914 Afer_0914 Afer_0914 934150 934494 - conserved hypothetical protein KEGG: ace:Acel_1202 hypothetical protein gene gene931 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0914 Afer_0915 Afer_0915 Afer_0915 934656 935627 + tryptophanyl-tRNA synthetase KEGG: mab:MAB_3683c tryptophanyl-tRNA synthetase~TIGRFAM: tryptophanyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib gene gene932 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0915 Afer_0916 Afer_0916 Afer_0916 935648 936001 + twin-arginine translocation protein%2C TatB subunit KEGG: bid:Bind_2704 twin-arginine translocation protein%2C TatB subunit gene gene933 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0916 Afer_0917 Afer_0917 Afer_0917 936001 936777 + Sec-independent protein translocase%2C TatC subunit TIGRFAM: Sec-independent protein translocase%2C TatC subunit~PFAM: Sec-independent periplasmic protein translocase~KEGG: fre:Franean1_4868 sec-independent protein translocase%2C TatC subunit gene gene934 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0917 Afer_0918 Afer_0918 Afer_0918 936851 939298 + DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B DSH domain protein%3B helicase domain protein~SMART: DEAD-like helicases %3B helicase domain protein~KEGG: ace:Acel_1206 DSH domain-containing protein gene gene935 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0918 Afer_0919 Afer_0919 Afer_0919 939310 940908 + thymidylate synthase complementing protein ThyX PFAM: thymidylate synthase complementing protein ThyX~KEGG: rrs:RoseRS_0926 thymidylate synthase complementing protein ThyX gene gene936 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0919 Afer_0920 Afer_0920 Afer_0920 940905 941495 - hypothetical protein KEGG: hypothetical protein LOC100012673 gene gene937 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0920 Afer_0921 Afer_0921 Afer_0921 941529 942128 + hypothetical protein gene gene938 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0921 Afer_0922 Afer_0922 Afer_0922 942154 942564 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: smr:Smar_1194 NUDIX hydrolase gene gene939 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0922 Afer_0923 Afer_0923 Afer_0923 942575 942898 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bxe:Bxe_A4157 MarR family transcriptional regulator gene gene940 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0923 Afer_0924 Afer_0924 Afer_0924 942906 944570 - hypothetical protein KEGG: Hypothetical protein CBG02561 gene gene941 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0924 Afer_0925 Afer_0925 Afer_0925 944807 945814 - pseudogene gene942 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0925 Afer_0926 Afer_0926 Afer_0926 945811 946210 - pseudogene gene943 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0926 Afer_0927 Afer_0927 Afer_0927 946623 948158 + Curculin domain protein (mannose-binding) lectin PFAM: Curculin domain protein (mannose-binding) lectin~SMART: Curculin domain protein (mannose-binding) lectin~KEGG: bam:Bamb_0766 curculin domain-containing protein gene gene944 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0927 Afer_0928 Afer_0928 Afer_0928 948187 948939 + hypothetical protein gene gene945 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0928 Afer_0929 Afer_0929 Afer_0929 949244 949925 - pseudogene gene946 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0929 Afer_0930 Afer_0930 Afer_0930 950500 950742 - CopG domain protein DNA-binding domain protein PFAM: CopG domain protein DNA-binding domain protein gene gene947 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0930 Afer_0931 Afer_0931 Afer_0931 950826 951344 + hypothetical protein KEGG: bpl:BURPS1106A_2451 S-adenosylhomocysteine hydrolase gene gene948 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0931 Afer_0932 Afer_0932 Afer_0932 951379 951558 + pseudogene gene949 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0932 Afer_0933 Afer_0933 Afer_0933 951598 952491 - pseudogene gene950 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0933 Afer_0934 Afer_0934 Afer_0934 952797 953024 + conserved hypothetical protein KEGG: nca:Noca_3127 hypothetical protein gene gene951 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0934 Afer_0935 Afer_0935 Afer_0935 953021 953776 + Oxidoreductase FAD-binding domain protein PFAM: Oxidoreductase FAD-binding domain protein%3B oxidoreductase FAD/NAD(P)-binding domain protein~KEGG: afw:Anae109_1054 oxidoreductase FAD/NAD(P)- binding subunit gene gene952 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0935 Afer_0936 Afer_0936 Afer_0936 953775 954497 + pseudogene gene953 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0936 Afer_0937 Afer_0937 Afer_0937 954769 955878 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: rxy:Rxyl_0383 glycosyl transferase%2C group 1 gene gene954 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0937 Afer_0938 Afer_0938 Afer_0938 955891 956373 + cyclase/dehydrase PFAM: cyclase/dehydrase~KEGG: fal:FRAAL0171 hypothetical protein gene gene955 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0938 Afer_0939 Afer_0939 Afer_0939 956464 957786 + aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: aae:aq_2094 aminotransferase gene gene956 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0939 Afer_0940 Afer_0940 Afer_0940 957757 959145 - transcriptional regulator%2C GntR family with aminotransferase domain PFAM: regulatory protein GntR HTH%3B aminotransferase class I and II~SMART: regulatory protein GntR HTH~KEGG: fal:FRAAL1414 GntR family transcriptional regulator gene gene957 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0940 Afer_0941 Afer_0941 Afer_0941 959275 960570 + aminotransferase class-III PFAM: aminotransferase class-III~KEGG: sen:SACE_3418 aminotransferase class III gene gene958 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0941 Afer_0942 Afer_0942 Afer_0942 960570 962057 + methylmalonate-semialdehyde dehydrogenase TIGRFAM: methylmalonate-semialdehyde dehydrogenase~PFAM: Aldehyde Dehydrogenase~KEGG: sen:SACE_5185 methylmalonate-semialdehyde dehydrogenase (acylating) gene gene959 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0942 Afer_0943 Afer_0943 Afer_0943 962159 963208 + S-adenosylmethionine/tRNA-ribosyltransferase-iso merase TIGRFAM:S-adenosylmethionine/tRNA-ribosyltransferase -isomerase~PFAM: Queuosine biosynthesis protein~KEGG: mta:Moth_1695 S-adenosylmethionine gene gene960 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0943 Afer_0944 Afer_0944 Afer_0944 963205 964341 + queuine tRNA-ribosyltransferase KEGG: rxy:Rxyl_1330 queuine tRNA-ribosyltransferase~TIGRFAM: queuine tRNA-ribosyltransferase%3B tRNA- guanine transglycosylase%2C various specificities~PFAM: Queuine/other tRNA-ribosyltransferase gene gene961 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0944 Afer_0945 Afer_0945 Afer_0945 964371 965861 + protein-export membrane protein SecD TIGRFAM: protein-export membrane protein SecD%3B protein-export membrane protein%2C SecD/SecF family~KEGG: sen:SACE_2025 preprotein translocase subunit SecD gene gene962 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0945 Afer_0946 Afer_0946 Afer_0946 965858 966907 + protein-export membrane protein SecF TIGRFAM: protein-export membrane protein SecF%3B protein-export membrane protein%2C SecD/SecF family~PFAM: SecD/SecF/SecDF export membrane protein~KEGG: ace:Acel_1340 preprotein translocase subunit SecF gene gene963 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0946 Afer_0947 Afer_0947 Afer_0947 966917 969082 + (p)ppGpp synthetase I%2C SpoT/RelA KEGG: ace:Acel_1338 (p)ppGpp synthetase I%2C SpoT/RelA~TIGRFAM: RelA/SpoT family protein~PFAM: RelA/SpoT domain protein%3B TGS domain protein%3B amino acid-binding ACT domain protein%3B metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region gene gene964 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0947 Afer_0948 Afer_0948 Afer_0948 969247 970887 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: tac:Ta0427 L-asparagine permease related protein gene gene965 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0948 Afer_0949 Afer_0949 Afer_0949 971013 971369 + hypothetical protein gene gene966 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0949 Afer_0950 Afer_0950 Afer_0950 971366 971587 + hypothetical protein gene gene967 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0950 Afer_0951 Afer_0951 Afer_0951 971587 974151 + alanyl-tRNA synthetase KEGG: mca:MCA0389 alanyl-tRNA synthetase~TIGRFAM: alanyl-tRNA synthetase~PFAM: alanyl-tRNA synthetase class IIc%3B Threonyl/alanyl tRNA synthetase SAD gene gene968 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0951 Afer_0952 Afer_0952 Afer_0952 974148 974564 + Holliday junction resolvase YqgF PFAM: Holliday junction resolvase YqgF~SMART: Resolvase RNase H domain protein fold~KEGG: ade:Adeh_1232 Holliday junction resolvase YqgF gene gene969 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0952 Afer_0953 Afer_0953 Afer_0953 974561 975568 + aminodeoxychorismate lyase PFAM: aminodeoxychorismate lyase~KEGG: ace:Acel_1328 aminodeoxychorismate lyase gene gene970 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0953 Afer_0954 Afer_0954 Afer_0954 975565 976401 + shikimate 5-dehydrogenase TIGRFAM: shikimate 5-dehydrogenase~PFAM: Shikimate dehydrogenase substrate binding domain protein%3B Shikimate/quinate 5-dehydrogenase~KEGG: rxy:Rxyl_1362 shikimate dehydrogenase gene gene971 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0954 Afer_0955 Afer_0955 Afer_0955 976557 977675 - phage shock protein A%2C PspA PFAM: PspA/IM30 family protein~KEGG: ace:Acel_0950 phage shock protein A%2C PspA gene gene972 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0955 Afer_0956 Afer_0956 Afer_0956 977838 978986 + rod shape-determining protein RodA TIGRFAM: rod shape-determining protein RodA~PFAM: cell cycle protein~KEGG: nca:Noca_3461 rod shape-determining protein RodA gene gene973 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0956 Afer_0957 Afer_0957 Afer_0957 978976 979437 + protein of unknown function DUF151 PFAM: protein of unknown function DUF151~KEGG: sth:STH3179 hypothetical protein gene gene974 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0957 Afer_0958 Afer_0958 Afer_0958 979447 980298 - nicotinate-nucleotide pyrophosphorylase TIGRFAM: nicotinate-nucleotide pyrophosphorylase~PFAM: Quinolinate phosphoribosyl transferase~KEGG: dac:Daci_1541 nicotinate-nucleotide pyrophosphorylase gene gene975 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0958 Afer_0959 Afer_0959 Afer_0959 980295 981770 - L-aspartate oxidase PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein~KEGG: ret:RHE_PE00440 L-aspartate oxidase gene gene976 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0959 Afer_0960 Afer_0960 Afer_0960 981767 982777 - quinolinate synthetase complex%2C A subunit KEGG: ace:Acel_1145 quinolinate synthetase~TIGRFAM: quinolinate synthetase complex%2C A subunit~PFAM: Quinolinate synthetase A gene gene977 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0960 Afer_0961 Afer_0961 Afer_0961 982764 983465 - hypothetical protein KEGG: nha:Nham_2818 hypothetical protein gene gene978 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0961 Afer_0962 Afer_0962 Afer_0962 983626 983904 + SirA family protein PFAM: SirA family protein~KEGG: sso:SSO8861 hypothetical protein gene gene979 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0962 Afer_0963 Afer_0963 Afer_0963 984162 984545 + DsrE family protein PFAM: DsrE family protein~KEGG: afu:AF0187 hypothetical protein gene gene980 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0963 Afer_0964 Afer_0964 Afer_0964 984545 985264 + conserved hypothetical protein KEGG: cts:Ctha_0138 hypothetical protein gene gene981 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0964 Afer_0965 Afer_0965 Afer_0965 985261 986451 + protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein~KEGG: cts:Ctha_0137 protein of unknown function DUF224 cysteine-rich region domain protein gene gene982 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0965 Afer_0966 Afer_0966 Afer_0966 986461 987516 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B HI0933 family protein~KEGG: cts:Ctha_0136 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene983 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0966 Afer_0967 Afer_0967 Afer_0967 987513 988205 + hypothetical protein KEGG: cts:Ctha_0134 hypothetical protein gene gene984 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0967 Afer_0968 Afer_0968 Afer_0968 988205 989518 + protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein~KEGG: cts:Ctha_0133 protein of unknown function DUF224 cysteine-rich region domain protein gene gene985 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0968 Afer_0969 Afer_0969 Afer_0969 989529 990302 + Electron transfer flavoprotein alpha/beta- subunit PFAM: Electron transfer flavoprotein alpha/beta- subunit~KEGG: cts:Ctha_0132 electron transfer flavoprotein alpha/beta-subunit gene gene986 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0969 Afer_0970 Afer_0970 Afer_0970 990314 991264 + Electron transfer flavoprotein alpha subunit PFAM: Electron transfer flavoprotein alpha subunit %3B Electron transfer flavoprotein alpha/beta-subunit~KEGG: cts:Ctha_0131 electron transfer flavoprotein alpha subunit gene gene987 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0970 Afer_0971 Afer_0971 Afer_0971 991273 993444 + protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein~KEGG: bph:Bphy_5959 hypothetical protein gene gene988 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0971 Afer_0972 Afer_0972 Afer_0972 993441 993782 + hypothetical protein gene gene989 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0972 Afer_0973 Afer_0973 Afer_0973 993881 994315 + glycine cleavage H-protein PFAM: glycine cleavage H-protein~KEGG: aae:aq_1657 glycine cleavage system protein H gene gene990 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0973 Afer_0974 Afer_0974 Afer_0974 994325 994801 + glycine cleavage H-protein PFAM: glycine cleavage H-protein~KEGG: aae:aq_944 glycine cleavage system protein H gene gene991 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0974 Afer_0975 Afer_0975 Afer_0975 994826 994933 - hypothetical protein gene gene992 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0975 Afer_0976 Afer_0976 Afer_0976 995142 995633 + putative NADH dehydrogenase KEGG: nca:Noca_2931 putative NADH dehydrogenase gene gene993 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0976 Afer_0977 Afer_0977 Afer_0977 995633 996271 + Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: stp:Strop_1655 Rieske (2Fe-2S) domain- containing protein gene gene994 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0977 Afer_0978 Afer_0978 Afer_0978 998345 999175 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: amr:AM1_A0193 integrase%2C catalytic region gene gene995 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0978 Afer_0979 Afer_0979 Afer_0979 999194 1000072 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: amr:AM1_A0193 integrase%2C catalytic region gene gene996 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0979 Afer_0980 Afer_0980 Afer_0980 1000069 1000398 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene997 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0980 Afer_0981 Afer_0981 Afer_0981 1000505 1000834 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene998 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0981 Afer_0982 Afer_0982 Afer_0982 1003367 1003645 - CRISPR-associated protein Cas2 TIGRFAM: CRISPR-associated protein Cas2~KEGG: sgr:SGR_3548 putative CRISPR-associated Cas2 family protein gene gene999 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0982 Afer_0983 Afer_0983 Afer_0983 1003642 1004586 - CRISPR-associated protein Cas1 TIGRFAM: CRISPR-associated protein Cas1~PFAM: protein of unknown function DUF48~KEGG: saq:Sare_2578 CRISPR-associated Cas1 family protein gene gene1000 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0983 Afer_0984 Afer_0984 Afer_0984 1004583 1005263 - CRISPR-associated protein%2C Cse3 family TIGRFAM: CRISPR-associated protein%2C Cse3 family~PFAM: CRISPR-associated protein CT1974~KEGG: saq:Sare_2577 CRISPR-associated CSE3 family protein gene gene1001 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0984 Afer_0985 Afer_0985 Afer_0985 1005265 1006026 - CRISPR-associated protein Cas5 family TIGRFAM: CRISPR-associated protein Cas5 family%3B CRISPR-associated protein Cas5~KEGG: fra:Francci3_0021 CRISPR-associated Cas5e family protein gene gene1002 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0985 Afer_0986 Afer_0986 Afer_0986 1006023 1007183 - CRISPR-associated protein%2C Cse4 family TIGRFAM: CRISPR-associated protein%2C Cse4 family~KEGG: saq:Sare_2575 CRISPR-associated CSE4 family protein gene gene1003 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0986 Afer_0987 Afer_0987 Afer_0987 1007180 1007752 - CRISPR-associated protein%2C Cse2 family TIGRFAM: CRISPR-associated protein%2C Cse2 family~KEGG: fra:Francci3_0019 hypothetical protein gene gene1004 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0987 Afer_0988 Afer_0988 Afer_0988 1007749 1009371 - CRISPR-associated protein%2C Cse1 family TIGRFAM: CRISPR-associated protein%2C Cse1 family~KEGG: sgr:SGR_3542 putative CRISPR-associated helicase Cas3 family protein protein gene gene1005 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0988 Afer_0989 Afer_0989 Afer_0989 1009361 1012129 - CRISPR-associated helicase Cas3 KEGG: fal:FRAAL0452 hypothetical protein~TIGRFAM: CRISPR-associated helicase Cas3~PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicases gene gene1006 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0989 Afer_0990 Afer_0990 Afer_0990 1012347 1013483 + hypothetical protein KEGG: mkm:Mkms_5906 integrase%2C catalytic region gene gene1007 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0990 Afer_0991 Afer_0991 Afer_0991 1013569 1014142 - pseudogene gene1008 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0991 Afer_0992 Afer_0992 Afer_0992 1014610 1015383 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: msm:MSMEG_1372 ABC transporter ATP-binding protein gene gene1009 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0992 Afer_0993 Afer_0993 Afer_0993 1015380 1016426 - Monosaccharide-transporting ATPase PFAM: inner-membrane translocator~KEGG: rxy:Rxyl_0947 inner-membrane translocator gene gene1010 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0993 Afer_0994 Afer_0994 Afer_0994 1016522 1017571 - periplasmic binding protein/LacI transcriptional regulator PFAM: periplasmic binding protein/LacI transcriptional regulator~KEGG: acr:Acry_1366 periplasmic binding protein/LacI transcriptional regulator gene gene1011 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0994 Afer_0995 Afer_0995 Afer_0995 1017650 1018699 - transcriptional regulator%2C LacI family PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI~KEGG: cmi:CMM_2841 LacI family transcriptional regulator gene gene1012 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0995 Afer_0996 Afer_0996 Afer_0996 1018822 1019718 - PfkB domain protein PFAM: PfkB domain protein~KEGG: saq:Sare_3490 ribokinase-like domain- containing protein gene gene1013 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0996 Afer_0997 Afer_0997 Afer_0997 1019748 1019963 - oxidoreductase KEGG: nca:Noca_4428 oxidoreductase gene gene1014 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0997 Afer_0998 Afer_0998 Afer_0998 1019956 1021182 - Respiratory-chain NADH dehydrogenase domain 51 kDa subunit PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit~KEGG: sco:SCP1.160c putative oxidoreductase gene gene1015 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0998 Afer_0999 Afer_0999 Afer_0999 1021179 1022285 - hypothetical protein KEGG: nca:Noca_3830 ferric reductase domain- containing protein gene gene1016 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_0999 Afer_1000 Afer_1000 Afer_1000 1022279 1023145 - ApbE family lipoprotein PFAM: ApbE family lipoprotein~KEGG: fal:FRAAL3949 putative thiamine biosynthesis lipoprotein%2C ApbE-like gene gene1017 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1000 Afer_1001 Afer_1001 Afer_1001 1023147 1023431 - hypothetical protein KEGG: K11245 mating pheromone-induced death protein 2 gene gene1018 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1001 Afer_1002 Afer_1002 Afer_1002 1023549 1024637 - biotin/lipoate A/B protein ligase PFAM: biotin/lipoate A/B protein ligase~KEGG: cts:Ctha_0125 biotin/lipoate A/B protein ligase gene gene1019 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1002 Afer_1003 Afer_1003 Afer_1003 1024634 1025968 - cell cycle protein PFAM: cell cycle protein~KEGG: fal:FRAAL6752 putative cell division protein FtsW gene gene1020 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1003 Afer_1004 Afer_1004 Afer_1004 1026092 1028161 + Polyphosphate kinase PFAM: Polyphosphate kinase~KEGG: saq:Sare_1153 polyphosphate kinase gene gene1021 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1004 Afer_1005 Afer_1005 Afer_1005 1028158 1028853 + adenylate cyclase PFAM: adenylate cyclase~KEGG: sma:SAV_5460 hypothetical protein gene gene1022 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1005 Afer_1006 Afer_1006 Afer_1006 1028841 1030415 + Ppx/GppA phosphatase PFAM: Ppx/GppA phosphatase%3B metal-dependent phosphohydrolase HD sub domain~KEGG: gfo:GFO_3499 exopolyphosphatase gene gene1023 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1006 Afer_1007 Afer_1007 Afer_1007 1030439 1031776 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: mmi:MMAR_0388 oxidoreductase gene gene1024 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1007 Afer_1008 Afer_1008 Afer_1008 1031982 1033643 + Glucose-6-phosphate isomerase PFAM: phosphoglucose isomerase (PGI)~KEGG: nfa:nfa49980 glucose-6-phosphate isomerase gene gene1025 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1008 Afer_1009 Afer_1009 Afer_1009 1033640 1034713 + transaldolase TIGRFAM: transaldolase~PFAM: Transaldolase~KEGG: bbt:BBta_p0088 transaldolase gene gene1026 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1009 Afer_1010 Afer_1010 Afer_1010 1034710 1035699 + quinone oxidoreductase%2C YhdH/YhfP family TIGRFAM: quinone oxidoreductase%2C YhdH/YhfP family~PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: dsh:Dshi_2319 quinone oxidoreductase putative YhdH/YhfP gene gene1027 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1010 Afer_1011 Afer_1011 Afer_1011 1035703 1036317 + dephospho-CoA kinase TIGRFAM: dephospho-CoA kinase~PFAM: Dephospho-CoA kinase~KEGG: cdi:DIP1152 dephospho-CoA kinase gene gene1028 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1011 Afer_1012 Afer_1012 Afer_1012 1036342 1037199 + putative signal transduction protein PFAM: Metal-dependent hydrolase HDOD~KEGG: dar:Daro_1978 HDIG gene gene1029 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1012 Afer_1013 Afer_1013 Afer_1013 1037212 1039215 + excinuclease ABC%2C B subunit KEGG: chy:CHY_0258 excinuclease ABC subunit B~TIGRFAM: excinuclease ABC%2C B subunit~PFAM: helicase domain protein%3B UvrB/UvrC protein~SMART: DEAD-like helicases %3B helicase domain protein gene gene1030 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1013 Afer_1014 Afer_1014 Afer_1014 1039302 1040666 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: nca:Noca_2937 beta-lactamase domain- containing protein gene gene1031 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1014 Afer_1015 Afer_1015 Afer_1015 1040709 1041209 + hypothetical protein KEGG: rxy:Rxyl_1675 carbohydrate kinase%2C FGGY gene gene1032 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1015 Afer_1016 Afer_1016 Afer_1016 1041191 1041532 - Domain of unknown function DUF1791 PFAM: Domain of unknown function DUF1791~KEGG: aau:AAur_pTC10239 hypothetical protein gene gene1033 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1016 Afer_1017 Afer_1017 Afer_1017 1041529 1042020 - hypothetical protein KEGG: ace:Acel_0440 hypothetical protein gene gene1034 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1017 Afer_1018 Afer_1018 Afer_1018 1042229 1043167 + NAD-dependent epimerase/dehydratase PFAM: NAD-dependent epimerase/dehydratase%3B Male sterility domain%3B 3-beta hydroxysteroid dehydrogenase/isomerase%3B dTDP-4-dehydrorhamnose reductase%3B short-chain dehydrogenase/reductase SDR~KEGG: sen:SACE_5693 NAD-dependent epimerase/dehydratase gene gene1035 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1018 Afer_1019 Afer_1019 Afer_1019 1043463 1044311 - hypothetical protein KEGG: cau:Caur_3200 uncharacterized component of anaerobic dehydrogenase-like protein gene gene1036 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1019 Afer_1020 Afer_1020 Afer_1020 1044292 1047225 - molydopterin dinucleotide-binding region PFAM: molydopterin dinucleotide-binding region%3B molybdopterin oxidoreductase Fe4S4 region%3B molybdopterin oxidoreductase~KEGG: cau:Caur_3201 nitrate reductase gene gene1037 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1020 Afer_1021 Afer_1021 Afer_1021 1047246 1048784 - 4Fe-4S ferredoxin iron-sulfur binding domain protein PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein%3B Polysulphide reductase NrfD~KEGG: nca:Noca_2933 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein gene gene1038 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1021 Afer_1022 Afer_1022 Afer_1022 1049066 1049311 - hypothetical protein KEGG: ajs:Ajs_3417 hypothetical protein gene gene1039 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1022 Afer_1023 Afer_1023 Afer_1023 1049398 1051941 - hypothetical protein KEGG: afw:Anae109_1828 hypothetical protein gene gene1040 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1023 Afer_1024 Afer_1024 Afer_1024 1051923 1052729 - glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: ace:Acel_0441 glycosyl transferase family protein gene gene1041 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1024 Afer_1025 Afer_1025 Afer_1025 1053128 1057123 + ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent KEGG: ace:Acel_1476 vitamin B12-dependent ribonucleotide reductase~TIGRFAM: ribonucleoside-diphosphate reductase%2C adenosylcobalamin-dependent~PFAM: Ribonucleotide reductase class II vitamin B12- dependent%3B ribonucleotide reductase large subunit~SMART: Hedgehog/intein hint domain protein gene gene1042 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1025 Afer_1026 Afer_1026 Afer_1026 1057527 1059215 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B pyridine nucleotide-disulphide oxidoreductase dimerization region%3B Rhodanese domain protein~SMART: Rhodanese domain protein~KEGG: cef:CE0339 putative pyridine nucleotide- disulphide oxidoreductase gene gene1043 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1026 Afer_1027 Afer_1027 Afer_1027 1059265 1060884 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: rpi:Rpic_0109 AMP-dependent synthetase and ligase gene gene1044 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1027 Afer_1028 Afer_1028 Afer_1028 1061064 1061666 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: nca:Noca_4111 regulatory protein%2C TetR gene gene1045 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1028 Afer_1029 Afer_1029 Afer_1029 1061852 1062997 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: mab:MAB_1851 acyl-CoA dehydrogenase FadE gene gene1046 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1029 Afer_1030 Afer_1030 Afer_1030 1062994 1063803 + conserved hypothetical protein KEGG: sen:SACE_3125 hypothetical protein gene gene1047 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1030 Afer_1031 Afer_1031 Afer_1031 1063807 1065450 + Propionyl-CoA carboxylase PFAM: carboxyl transferase~KEGG: stp:Strop_4327 propionyl-CoA carboxylase gene gene1048 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1031 Afer_1032 Afer_1032 Afer_1032 1065447 1067387 + Carbamoyl-phosphate synthase L chain ATP- binding PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B biotin carboxylase domain protein%3B ATP-dependent carboxylate-amine ligase domain protein ATP-grasp%3B protein of unknown function DUF201%3B phosphoribosylglycinamide synthetase%3B biotin/lipoyl attachment domain-containing protein%3B Carbamoyl-phosphate synthetase large chain domain protein~KEGG: fal:FRAAL1668 acetyl-/propionyl-coenzyme A carboxylase alpha chain gene gene1049 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1032 Afer_1033 Afer_1033 Afer_1033 1067388 1069154 + protein of unknown function DUF1446 PFAM: protein of unknown function DUF1446~KEGG: mjl:Mjls_3217 hypothetical protein gene gene1050 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1033 Afer_1034 Afer_1034 Afer_1034 1069151 1069939 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: stp:Strop_3459 enoyl-CoA hydratase/isomerase gene gene1051 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1034 Afer_1035 Afer_1035 Afer_1035 1070303 1071736 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: acr:Acry_0648 amino acid permease-associated region gene gene1052 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1035 Afer_1036 Afer_1036 Afer_1036 1071821 1073839 - drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1%3B General substrate transporter~KEGG: sma:SAV_5831 multidrug-efflux transporter gene gene1053 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1036 Afer_1037 Afer_1037 Afer_1037 1073836 1074360 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR%3B regulatory protein ArsR~SMART: regulatory protein MarR~KEGG: rsa:RSal33209_0720 MarR family transcriptional regulator gene gene1054 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1037 Afer_1038 Afer_1038 Afer_1038 1074603 1075166 + PEBP family protein PFAM: PEBP family protein~KEGG: mpo:Mpop_0898 PEBP family protein gene gene1055 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1038 Afer_1039 Afer_1039 Afer_1039 1075206 1076567 - Chloride channel core PFAM: Chloride channel core~KEGG: rha:RHA1_ro05905 chloride channel transporter gene gene1056 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1039 Afer_1040 Afer_1040 Afer_1040 1076665 1077324 - regulatory protein TetR PFAM: regulatory protein TetR%3B Tetracyclin repressor domain protein~KEGG: ace:Acel_0040 TetR family transcriptional regulator gene gene1057 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1040 Afer_1041 Afer_1041 Afer_1041 1077491 1078867 - L-lactate dehydrogenase (cytochrome) PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase~KEGG: sen:SACE_5887 L-lactate dehydrogenase gene gene1058 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1041 Afer_1042 Afer_1042 Afer_1042 1078900 1079178 - hypothetical protein gene gene1059 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1042 Afer_1043 Afer_1043 Afer_1043 1079347 1080111 - ABC-2 type transporter KEGG: cau:Caur_0271 ABC-2 type transporter gene gene1060 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1043 Afer_1044 Afer_1044 Afer_1044 1080108 1081103 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: rrs:RoseRS_4617 ABC transporter related gene gene1061 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1044 Afer_1045 Afer_1045 Afer_1045 1081290 1081400 + hypothetical protein gene gene1062 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1045 Afer_1046 Afer_1046 Afer_1046 1081552 1083783 - hypothetical protein KEGG: spv:SPH_1885 cell wall surface anchor family protein gene gene1063 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1046 Afer_1047 Afer_1047 Afer_1047 1084023 1084507 - pseudogene gene1064 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1047 Afer_1048 Afer_1048 Afer_1048 1084505 1084744 + pseudogene gene1065 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1048 Afer_1049 Afer_1049 Afer_1049 1084894 1086231 + hypothetical protein gene gene1066 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1049 Afer_1050 Afer_1050 Afer_1050 1086395 1086647 + pseudogene gene1067 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1050 Afer_1051 Afer_1051 Afer_1051 1086673 1087668 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: rha:RHA1_ro11026 transposase gene gene1068 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1051 Afer_1052 Afer_1052 Afer_1052 1088132 1089232 - Radical SAM domain protein PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~KEGG: cts:Ctha_0126 radical SAM domain protein gene gene1069 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1052 Afer_1053 Afer_1053 Afer_1053 1089229 1090302 - biotin/lipoate A/B protein ligase PFAM: biotin/lipoate A/B protein ligase~KEGG: cts:Ctha_0128 biotin/lipoate A/B protein ligase gene gene1070 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1053 Afer_1054 Afer_1054 Afer_1054 1090299 1091270 - Radical SAM domain protein PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~KEGG: cts:Ctha_0127 radical SAM domain protein gene gene1071 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1054 Afer_1055 Afer_1055 Afer_1055 1091270 1091713 - glycine cleavage H-protein PFAM: glycine cleavage H-protein~KEGG: sto:ST1894 glycine cleavage system H protein gene gene1072 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1055 Afer_1056 Afer_1056 Afer_1056 1091685 1092764 - biotin/lipoate A/B protein ligase PFAM: biotin/lipoate A/B protein ligase~KEGG: cts:Ctha_0125 biotin/lipoate A/B protein ligase gene gene1073 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1056 Afer_1057 Afer_1057 Afer_1057 1092910 1093650 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: gtn:GTNG_0470 enoyl-(acyl carrier protein) reductase gene gene1074 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1057 Afer_1058 Afer_1058 Afer_1058 1094217 1097450 + protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: nca:Noca_2867 hypothetical protein gene gene1075 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1058 Afer_1059 Afer_1059 Afer_1059 1097447 1098298 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: nca:Noca_2866 ABC transporter related gene gene1076 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1059 Afer_1060 Afer_1060 Afer_1060 1098295 1098987 + ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: sgr:SGR_3233 putative ABC-transporter ATP- binding protein gene gene1077 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1060 Afer_1061 Afer_1061 Afer_1061 1098992 1100473 - drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: sso:SSO1162 multidrug resistance protein gene gene1078 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1061 Afer_1062 Afer_1062 Afer_1062 1101669 1102940 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sgr:SGR_3045 major facilitator superfamily permease gene gene1080 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1062 Afer_1063 Afer_1063 Afer_1063 1103041 1103385 + conserved hypothetical protein KEGG: ooe:OEOE_0191 hypothetical protein gene gene1081 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1063 Afer_1064 Afer_1064 Afer_1064 1103495 1104931 + protein of unknown function DUF1212 PFAM: protein of unknown function DUF1212~KEGG: rha:RHA1_ro04718 amino acid export carrier protein gene gene1082 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1064 Afer_1065 Afer_1065 Afer_1065 1105109 1106323 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: nca:Noca_3966 major facilitator transporter gene gene1083 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1065 Afer_1066 Afer_1066 Afer_1066 1106342 1107205 - hypothetical protein gene gene1084 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1066 Afer_1067 Afer_1067 Afer_1067 1107202 1108083 - hypothetical protein KEGG: fre:Franean1_0904 hypothetical protein gene gene1085 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1067 Afer_1068 Afer_1068 Afer_1068 1108080 1109081 - aminoglycoside phosphotransferase PFAM: aminoglycoside phosphotransferase~KEGG: azc:AZC_2708 aminoglycoside phosphotransferase gene gene1086 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1068 Afer_1069 Afer_1069 Afer_1069 1109129 1109830 + hypothetical protein KEGG: scl:sce5793 hypothetical protein gene gene1087 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1069 Afer_1070 Afer_1070 Afer_1070 1109911 1110840 + Asparaginase PFAM: peptidase T2 asparaginase 2~KEGG: rca:Rcas_4430 asparaginase gene gene1088 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1070 Afer_1071 Afer_1071 Afer_1071 1110869 1112392 + Peptidase S53 propeptide PFAM: Peptidase S53 propeptide~KEGG: bph:Bphy_5054 peptidase S53 propeptide gene gene1089 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1071 Afer_1072 Afer_1072 Afer_1072 1112482 1112889 - OsmC family protein PFAM: OsmC family protein~KEGG: rha:RHA1_ro05070 hypothetical protein gene gene1090 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1072 Afer_1073 Afer_1073 Afer_1073 1113015 1113476 + hypothetical protein KEGG: ppg:PputGB1_0814 hypothetical protein gene gene1091 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1073 Afer_1074 Afer_1074 Afer_1074 1113575 1113634 - pseudogene gene1092 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1074 Afer_1075 Afer_1075 Afer_1075 1118886 1119404 + conserved hypothetical protein KEGG: fra:Francci3_1316 hypothetical protein gene gene1097 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1075 Afer_1076 Afer_1076 Afer_1076 1119374 1120192 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: pac:PPA1530 ABC transporter ATP-binding protein gene gene1098 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1076 Afer_1077 Afer_1077 Afer_1077 1120213 1120623 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: sco:SCO5851 integral membrane protein gene gene1099 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1077 Afer_1078 Afer_1078 Afer_1078 1120705 1121694 + diguanylate cyclase KEGG: azo:azo2612 GAF/GGDEF-domain containing protein~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene1100 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1078 Afer_1079 Afer_1079 Afer_1079 1121926 1123209 - RNA binding S1 domain protein PFAM: RNA binding S1 domain protein~SMART: RNA binding S1 domain protein~KEGG: saq:Sare_3369 30S ribosomal protein S1 gene gene1101 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1079 Afer_1080 Afer_1080 Afer_1080 1123306 1125966 - DNA polymerase I KEGG: mtf:TBFG_11645 DNA polymerase I~TIGRFAM: DNA polymerase I~PFAM: DNA-directed DNA polymerase%3B 5'-3' exonuclease~SMART: 5'-3' exonuclease%3B DNA-directed DNA polymerase%3B Helix-hairpin-helix domain protein class 2 gene gene1102 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1080 Afer_1081 Afer_1081 Afer_1081 1125935 1126546 - response regulator receiver and ANTAR domain protein PFAM: response regulator receiver%3B ANTAR domain protein~SMART: response regulator receiver~KEGG: fre:Franean1_2035 response regulator receiver/ANTAR domain-containing protein gene gene1103 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1081 Afer_1082 Afer_1082 Afer_1082 1126622 1127290 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: saq:Sare_1808 beta-lactamase domain- containing protein gene gene1104 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1082 Afer_1083 Afer_1083 Afer_1083 1127542 1128613 - pseudogene gene1106 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1083 Afer_1084 Afer_1084 Afer_1084 1129004 1130389 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein%3B molybdopterin dehydrogenase FAD-binding~KEGG: mtf:TBFG_12303 dehydrogenase gene gene1107 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1084 Afer_1085 Afer_1085 Afer_1085 1130777 1132015 + Acyl transferase PFAM: Acyl transferase~KEGG: bsu:BSU15900 acyl-carrier-protein S- malonyltransferase gene gene1108 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1085 Afer_1086 Afer_1086 Afer_1086 1132024 1132944 + 3-oxoacyl-(acyl-carrier-protein) synthase III KEGG: dau:Daud_0639 3-oxoacyl-(acyl-carrier- protein) synthase III~TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III~PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein%3B 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III gene gene1109 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1086 Afer_1087 Afer_1087 Afer_1087 1132941 1133660 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: ace:Acel_1151 3-oxoacyl-[acyl-carrier- protein] reductase gene gene1110 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1087 Afer_1088 Afer_1088 Afer_1088 1133768 1134010 + acyl carrier protein TIGRFAM: acyl carrier protein~PFAM: phosphopantetheine-binding~KEGG: syn:ssl2084 acyl carrier protein gene gene1111 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1088 Afer_1089 Afer_1089 Afer_1089 1134007 1135212 + Beta-ketoacyl synthase PFAM: Beta-ketoacyl synthase~KEGG: drm:Dred_2070 beta-ketoacyl synthase gene gene1112 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1089 Afer_1090 Afer_1090 Afer_1090 1135170 1135403 - hypothetical protein gene gene1113 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1090 Afer_1091 Afer_1091 Afer_1091 1135482 1137038 - glucose-methanol-choline oxidoreductase PFAM: glucose-methanol-choline oxidoreductase%3B GMC oxidoreductase~KEGG: nfa:nfa26120 putative oxidoreductase gene gene1114 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1091 Afer_1092 Afer_1092 Afer_1092 1137048 1138727 - ABC-1 domain protein PFAM: ABC-1 domain protein%3B aminoglycoside phosphotransferase~KEGG: mab:MAB_2393c hypothetical protein gene gene1115 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1092 Afer_1093 Afer_1093 Afer_1093 1138708 1139721 - 6-phosphogluconate dehydrogenase%2C decarboxylating KEGG: bxe:Bxe_B1341 6-phosphogluconate dehydrogenase-like protein~TIGRFAM: 6-phosphogluconate dehydrogenase%2C decarboxylating~PFAM: 6-phosphogluconate dehydrogenase NAD-binding%3B 6-phosphogluconate dehydrogenase domain protein gene gene1116 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1093 Afer_1094 Afer_1094 Afer_1094 1139745 1140554 - tryptophan synthase%2C alpha subunit KEGG: fal:FRAAL4682 tryptophan synthase%2C alpha protein~TIGRFAM: tryptophan synthase%2C alpha subunit~PFAM: tryptophan synthase alpha chain gene gene1117 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1094 Afer_1095 Afer_1095 Afer_1095 1140551 1141738 - tryptophan synthase%2C beta subunit TIGRFAM: tryptophan synthase%2C beta subunit~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: fal:FRAAL4681 tryptophan synthase subunit beta gene gene1118 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1095 Afer_1096 Afer_1096 Afer_1096 1141719 1142360 - Phosphoribosylanthranilate isomerase PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI)~KEGG: dau:Daud_1187 phosphoribosylanthranilate isomerase gene gene1119 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1096 Afer_1097 Afer_1097 Afer_1097 1142323 1143138 - Indole-3-glycerol-phosphate synthase PFAM: Indole-3-glycerol phosphate synthase~KEGG: bvu:BVU_4091 indole-3-glycerol-phosphate synthase gene gene1120 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1097 Afer_1098 Afer_1098 Afer_1098 1143309 1145084 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: fal:FRAAL4785 putative mutidrug efflux permease gene gene1121 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1098 Afer_1099 Afer_1099 Afer_1099 1145125 1145802 + two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: fre:Franean1_6145 two component transcriptional regulator gene gene1122 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1099 Afer_1100 Afer_1100 Afer_1100 1145804 1147189 + histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase HAMP region domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: bha:BH1945 two-component sensor histidine kinase gene gene1123 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1100 Afer_1101 Afer_1101 Afer_1101 1147145 1150423 - diguanylate cyclase/phosphodiesterase KEGG: saq:Sare_1110 diguanylate cyclase/phosphodiesterase~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~SMART: GGDEF domain containing protein%3B EAL domain protein gene gene1124 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1101 Afer_1102 Afer_1102 Afer_1102 1150478 1151302 + folate-binding protein YgfZ TIGRFAM: folate-binding protein YgfZ~PFAM: glycine cleavage T protein (aminomethyl transferase)~KEGG: ade:Adeh_2848 LigA gene gene1125 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1102 Afer_1103 Afer_1103 Afer_1103 1151433 1152920 - Anthranilate synthase PFAM: Chorismate binding-like%3B Anthranilate synthase component I domain protein~KEGG: sco:SCO2043 anthranilate synthase component I gene gene1126 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1103 Afer_1104 Afer_1104 Afer_1104 1152917 1153279 - Phosphoribosyl-AMP cyclohydrolase PFAM: phosphoribosyl-AMP cyclohydrolase~KEGG: swo:Swol_1764 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein gene gene1127 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1104 Afer_1105 Afer_1105 Afer_1105 1153276 1153596 - chaperonin Cpn10 PFAM: chaperonin Cpn10~KEGG: ace:Acel_1680 chaperonin Cpn10 gene gene1128 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1105 Afer_1106 Afer_1106 Afer_1106 1153619 1154383 - imidazoleglycerol phosphate synthase%2C cyclase subunit KEGG: gdj:Gdia_1623 imidazoleglycerol phosphate synthase%2C cyclase subunit~TIGRFAM: imidazoleglycerol phosphate synthase%2C cyclase subunit~PFAM: histidine biosynthesis protein gene gene1129 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1106 Afer_1107 Afer_1107 Afer_1107 1154371 1155111 - histidine biosynthesis protein PFAM: histidine biosynthesis protein~KEGG: mta:Moth_2032 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4- carboxamide isomerase gene gene1130 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1107 Afer_1108 Afer_1108 Afer_1108 1155114 1155731 - imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit TIGRFAM: imidazole glycerol phosphate synthase%2C glutamine amidotransferase subunit~PFAM: glutamine amidotransferase class-I%3B CobB/CobQ domain protein glutamine amidotransferase~KEGG: rxy:Rxyl_1104 imidazole glycerol phosphate synthase subunit HisH gene gene1131 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1108 Afer_1109 Afer_1109 Afer_1109 1155728 1156324 - Imidazoleglycerol-phosphate dehydratase PFAM: imidazoleglycerol-phosphate dehydratase~KEGG: tth:TTC0061 imidazoleglycerol-phosphate dehydratase gene gene1132 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1109 Afer_1110 Afer_1110 Afer_1110 1156321 1157355 - histidinol-phosphate aminotransferase TIGRFAM: histidinol-phosphate aminotransferase~PFAM: aminotransferase class I and II~KEGG: fra:Francci3_3026 histidinol-phosphate aminotransferase gene gene1133 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1110 Afer_1111 Afer_1111 Afer_1111 1157349 1158647 - histidinol dehydrogenase KEGG: csa:Csal_2212 histidinol dehydrogenase~TIGRFAM: histidinol dehydrogenase~PFAM: histidinol dehydrogenase gene gene1134 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1111 Afer_1112 Afer_1112 Afer_1112 1158739 1158930 + hypothetical protein gene gene1135 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1112 Afer_1113 Afer_1113 Afer_1113 1158999 1159811 + SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: cmi:CMM_1412 hypothetical protein gene gene1136 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1113 Afer_1114 Afer_1114 Afer_1114 1160037 1161497 - pyruvate kinase KEGG: tth:TTC1611 pyruvate kinase~TIGRFAM: pyruvate kinase~PFAM: Pyruvate kinase barrel%3B Pyruvate kinase alpha/beta gene gene1137 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1114 Afer_1115 Afer_1115 Afer_1115 1161524 1162033 - hypothetical protein KEGG: ace:Acel_0515 hypothetical protein gene gene1138 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1115 Afer_1116 Afer_1116 Afer_1116 1162162 1163049 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: tpd:Teth39_1647 hypothetical protein gene gene1139 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1116 Afer_1117 Afer_1117 Afer_1117 1163076 1163585 + conserved hypothetical protein KEGG: rci:RCIX2228 hypothetical protein gene gene1140 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1117 Afer_1118 Afer_1118 Afer_1118 1163506 1165029 - Glycine dehydrogenase (decarboxylating) PFAM: glycine cleavage system P-protein~KEGG: tte:TTE0293 glycine dehydrogenase subunit 2 gene gene1141 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1118 Afer_1119 Afer_1119 Afer_1119 1165030 1166352 - Glycine dehydrogenase (decarboxylating) PFAM: glycine cleavage system P-protein~KEGG: mta:Moth_1943 glycine dehydrogenase subunit 1 gene gene1142 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1119 Afer_1120 Afer_1120 Afer_1120 1166370 1167419 - glycine cleavage system T protein TIGRFAM: glycine cleavage system T protein~PFAM: glycine cleavage T protein (aminomethyl transferase)%3B Glycine cleavage T-protein barrel~KEGG: mgi:Mflv_2939 glycine cleavage system aminomethyltransferase T gene gene1143 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1120 Afer_1121 Afer_1121 Afer_1121 1167454 1167891 - hypothetical protein gene gene1144 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1121 Afer_1122 Afer_1122 Afer_1122 1167955 1168533 + CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: kra:Krad_3101 CDP-alcohol phosphatidyltransferase gene gene1145 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1122 Afer_1123 Afer_1123 Afer_1123 1168572 1171136 + nucleotidyl transferase PFAM: Nucleotidyl transferase%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B transferase hexapeptide repeat containing protein~KEGG: tfu:Tfu_1394 mannose-1-phosphate guanylyltransferase / phosphomannomutase gene gene1146 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1123 Afer_1124 Afer_1124 Afer_1124 1171148 1171537 + glycine cleavage system H protein TIGRFAM: glycine cleavage system H protein~PFAM: glycine cleavage H-protein~KEGG: ace:Acel_1227 glycine cleavage system H protein gene gene1147 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1124 Afer_1125 Afer_1125 Afer_1125 1171534 1172028 + FHA domain containing protein PFAM: Forkhead-associated protein~SMART: Forkhead-associated protein~KEGG: ace:Acel_1226 FHA domain-containing protein gene gene1148 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1125 Afer_1126 Afer_1126 Afer_1126 1172025 1172813 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: sma:SAV_6982 hypothetical protein gene gene1149 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1126 Afer_1127 Afer_1127 Afer_1127 1172888 1173115 - hypothetical protein gene gene1150 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1127 Afer_1128 Afer_1128 Afer_1128 1173210 1173716 - protein of unknown function DUF151 PFAM: protein of unknown function DUF151~KEGG: tfu:Tfu_1396 hypothetical protein gene gene1151 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1128 Afer_1129 Afer_1129 Afer_1129 1173771 1174583 - cytochrome c biogenesis protein transmembrane region PFAM: cytochrome c biogenesis protein transmembrane region~KEGG: mgm:Mmc1_0245 cytochrome c biogenesis protein%2C transmembrane region gene gene1152 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1129 Afer_1130 Afer_1130 Afer_1130 1174682 1176157 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: sgr:SGR_469 major facilitator superfamily permease gene gene1153 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1130 Afer_1131 Afer_1131 Afer_1131 1176227 1177210 + integral membrane protein KEGG: sco:SCO1215 integral membrane protein gene gene1154 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1131 Afer_1132 Afer_1132 Afer_1132 1177293 1178033 - peptidase M50 PFAM: peptidase M50~KEGG: eli:ELI_03495 hypothetical protein gene gene1155 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1132 Afer_1133 Afer_1133 Afer_1133 1178033 1178932 - integrase family protein PFAM: integrase family protein%3B integrase domain protein SAM domain protein~KEGG: dau:Daud_1282 tyrosine recombinase XerD gene gene1156 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1133 Afer_1134 Afer_1134 Afer_1134 1178916 1179518 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: stp:Strop_1921 NUDIX hydrolase gene gene1157 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1134 Afer_1135 Afer_1135 Afer_1135 1179515 1181122 - CTP synthase KEGG: ace:Acel_1243 CTP synthetase~TIGRFAM: CTP synthase~PFAM: CTP synthase-like%3B glutamine amidotransferase class-I gene gene1158 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1135 Afer_1136 Afer_1136 Afer_1136 1181168 1182775 - SMC domain protein PFAM: SMC domain protein~SMART: AAA ATPase~KEGG: ttj:TTHA1525 DNA repair protein RecN gene gene1159 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1136 Afer_1137 Afer_1137 Afer_1137 1182769 1183584 - ATP-NAD/AcoX kinase PFAM: ATP-NAD/AcoX kinase~KEGG: ace:Acel_1246 NAD(+) kinase gene gene1160 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1137 Afer_1138 Afer_1138 Afer_1138 1183595 1184344 - hemolysin A KEGG: ttj:TTHA0546 hemolysin~TIGRFAM: hemolysin A~PFAM: RNA-binding S4 domain protein%3B ribosomal RNA methyltransferase RrmJ/FtsJ~SMART: RNA-binding S4 domain protein gene gene1161 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1138 Afer_1139 Afer_1139 Afer_1139 1184385 1185014 + phosphoesterase PA-phosphatase related PFAM: phosphoesterase PA-phosphatase related~SMART: phosphoesterase PA-phosphatase related~KEGG: sma:SAV_7489 hypothetical protein gene gene1162 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1139 Afer_1140 Afer_1140 Afer_1140 1184923 1186098 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: rxy:Rxyl_2414 major facilitator superfamily MFS_1 gene gene1163 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1140 Afer_1141 Afer_1141 Afer_1141 1186377 1188215 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: saq:Sare_2145 extracellular solute-binding protein gene gene1164 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1141 Afer_1142 Afer_1142 Afer_1142 1188389 1189336 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: stp:Strop_4337 binding-protein-dependent transport systems inner membrane component gene gene1165 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1142 Afer_1143 Afer_1143 Afer_1143 1189365 1190324 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: stp:Strop_4338 binding-protein-dependent transport systems inner membrane component gene gene1166 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1143 Afer_1144 Afer_1144 Afer_1144 1190525 1192351 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: saq:Sare_2145 extracellular solute-binding protein gene gene1167 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1144 Afer_1145 Afer_1145 Afer_1145 1192447 1194078 + cell envelope-related transcriptional attenuator TIGRFAM: cell envelope-related function transcriptional attenuator%2C LytR/CpsA family~PFAM: cell envelope-related transcriptional attenuator~KEGG: ace:Acel_0412 cell envelope-related transcriptional attenuator gene gene1168 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1145 Afer_1146 Afer_1146 Afer_1146 1194111 1195046 + pyruvate carboxyltransferase PFAM: pyruvate carboxyltransferase~KEGG: fre:Franean1_3719 pyruvate carboxyltransferase gene gene1169 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1146 Afer_1147 Afer_1147 Afer_1147 1195043 1197073 - oligopeptide/dipeptide ABC transporter%2C ATPase subunit KEGG: saq:Sare_4781 oligopeptide/dipeptide ABC transporter%2C ATPase subunit~TIGRFAM: oligopeptide/dipeptide ABC transporter%2C ATPase subunit~PFAM: ABC transporter related%3B Oligopeptide/dipeptide ABC transporter domain protein~SMART: AAA ATPase gene gene1170 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1147 Afer_1148 Afer_1148 Afer_1148 1197811 1198938 + Radical SAM domain protein PFAM: Radical SAM domain protein~KEGG: nca:Noca_1430 radical SAM domain-containing protein gene gene1172 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1148 Afer_1149 Afer_1149 Afer_1149 1199120 1201084 - acetoacetyl-CoA synthase TIGRFAM: acetoacetyl-CoA synthase~PFAM: AMP-dependent synthetase and ligase~KEGG: mgi:Mflv_3863 acetoacetyl-CoA synthase gene gene1173 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1149 Afer_1150 Afer_1150 Afer_1150 1201074 1201277 - hypothetical protein gene gene1174 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1150 Afer_1151 Afer_1151 Afer_1151 1201302 1202960 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: sen:SACE_6960 acyl-CoA synthetase gene gene1175 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1151 Afer_1152 Afer_1152 Afer_1152 1203084 1204166 + glycine oxidase ThiO TIGRFAM: glycine oxidase ThiO~PFAM: FAD dependent oxidoreductase~KEGG: saq:Sare_4279 glycine oxidase ThiO gene gene1176 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1152 Afer_1153 Afer_1153 Afer_1153 1204163 1204369 + thiamine biosynthesis protein ThiS TIGRFAM: thiamine biosynthesis protein ThiS~PFAM: thiamineS protein~KEGG: stp:Strop_3887 thiamine biosynthesis protein ThiS gene gene1177 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1153 Afer_1154 Afer_1154 Afer_1154 1204366 1205133 + thiazole biosynthesis family protein PFAM: thiazole biosynthesis family protein~KEGG: mmi:MMAR_0720 thiamin biosynthesis protein ThiG gene gene1178 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1154 Afer_1155 Afer_1155 Afer_1155 1205169 1205987 + phosphomethylpyrimidine kinase KEGG: afw:Anae109_1765 phosphomethylpyrimidine kinase~TIGRFAM: phosphomethylpyrimidine kinase~PFAM: Phosphomethylpyrimidine kinase type-1 gene gene1179 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1155 Afer_1156 Afer_1156 Afer_1156 1206095 1207975 + diguanylate cyclase/phosphodiesterase KEGG: afe:Lferr_2664 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein%3B EAL domain protein~SMART: GGDEF domain containing protein%3B EAL domain protein gene gene1180 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1156 Afer_1157 Afer_1157 Afer_1157 1208044 1209018 - Prephenate dehydrogenase PFAM: Prephenate dehydrogenase~KEGG: krh:KRH_15220 prephenate dehydrogenase gene gene1181 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1157 Afer_1158 Afer_1158 Afer_1158 1209011 1209886 - prephenate dehydratase PFAM: prephenate dehydratase%3B amino acid-binding ACT domain protein~KEGG: bvi:Bcep1808_0964 chorismate mutase / prephenate dehydratase gene gene1182 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1158 Afer_1159 Afer_1159 Afer_1159 1209937 1210506 - NADPH-dependent FMN reductase PFAM: NADPH-dependent FMN reductase~KEGG: hau:Haur_2685 NAD(P)H dehydrogenase (quinone) gene gene1183 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1159 Afer_1160 Afer_1160 Afer_1160 1210635 1211192 + pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding~KEGG: scl:sce2276 hypothetical protein gene gene1184 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1160 Afer_1161 Afer_1161 Afer_1161 1211108 1212397 - geranylgeranyl reductase TIGRFAM: geranylgeranyl reductase~PFAM: FAD dependent oxidoreductase%3B monooxygenase FAD-binding~KEGG: fre:Franean1_5969 geranylgeranyl reductase gene gene1185 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1161 Afer_1162 Afer_1162 Afer_1162 1212420 1212938 - hypothetical protein gene gene1186 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1162 Afer_1163 Afer_1163 Afer_1163 1213444 1213656 + Heavy metal transport/detoxification protein PFAM: Heavy metal transport/detoxification protein~KEGG: mjl:Mjls_4497 heavy metal transport/detoxification protein gene gene1188 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1163 Afer_1164 Afer_1164 Afer_1164 1213640 1215799 + heavy metal translocating P-type ATPase TIGRFAM: heavy metal translocating P-type ATPase%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Heavy metal transport/detoxification protein%3B Haloacid dehalogenase domain protein hydrolase~KEGG: ace:Acel_1652 heavy metal translocating P- type ATPase gene gene1189 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1164 Afer_1165 Afer_1165 Afer_1165 1216242 1217146 - pseudogene gene1191 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1165 Afer_1166 Afer_1166 Afer_1166 1217520 1217819 + prevent-host-death family protein TIGRFAM: prevent-host-death family protein~PFAM: protein of unknown function DUF172~KEGG: fra:Francci3_2678 prevent-host-death protein gene gene1192 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1166 Afer_1167 Afer_1167 Afer_1167 1217816 1218079 + plasmid stabilization system PFAM: plasmid stabilization system~KEGG: neu:NE0476 hypothetical protein gene gene1193 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1167 Afer_1168 Afer_1168 Afer_1168 1218809 1219612 + Methyltransferase type 11 PFAM: Methyltransferase type 11%3B UbiE/COQ5 methyltransferase%3B Methyltransferase type 12~KEGG: mav:MAV_0854 methyltransferase-UbiE family protein gene gene1194 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1168 Afer_1169 Afer_1169 Afer_1169 1219825 1220331 - conserved hypothetical protein KEGG: efa:EF1339 hypothetical protein gene gene1195 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1169 Afer_1170 Afer_1170 Afer_1170 1220823 1221827 - hypothetical protein KEGG: ckl:CKL_3030 hypothetical protein gene gene1196 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1170 Afer_1171 Afer_1171 Afer_1171 1221965 1223239 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: mva:Mvan_5862 major facilitator superfamily transporter gene gene1197 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1171 Afer_1172 Afer_1172 Afer_1172 1223279 1223977 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR%3B Rhodanese domain protein~KEGG: rha:RHA1_ro11220 ArsR family transcriptional regulator gene gene1198 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1172 Afer_1173 Afer_1173 Afer_1173 1223974 1224672 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: smd:Smed_5362 two component transcriptional regulator%2C winged helix family gene gene1199 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1173 Afer_1174 Afer_1174 Afer_1174 1224669 1226135 - histidine kinase PFAM: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~KEGG: smd:Smed_5361 osmosensitive K+ channel signal transduction histidine kinase gene gene1200 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1174 Afer_1175 Afer_1175 Afer_1175 1226154 1227323 + osmosensitive K channel signal transduction histidine kinase%2C sensor subunit KdpD PFAM: Osmosensitive K channel His kinase sensor%3B UspA domain protein~KEGG: nfa:nfa15690 putative two-component system sensor kinase gene gene1201 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1175 Afer_1176 Afer_1176 Afer_1176 1227313 1227864 - Potassium-transporting ATPase PFAM: K transporting ATPase KdpC subunit~KEGG: acr:Acry_3490 potassium-transporting ATPase%2C C subunit gene gene1202 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1176 Afer_1177 Afer_1177 Afer_1177 1227861 1229918 - K+-transporting ATPase%2C B subunit TIGRFAM: K+-transporting ATPase%2C B subunit%3B ATPase%2C P-type (transporting)%2C HAD superfamily%2C subfamily IC~PFAM: E1-E2 ATPase-associated domain protein%3B Haloacid dehalogenase domain protein hydrolase~KEGG: fra:Francci3_3286 potassium-transporting ATPase subunit B gene gene1203 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1177 Afer_1178 Afer_1178 Afer_1178 1229915 1231609 - potassium-transporting ATPase%2C A subunit KEGG: mlo:mll3133 potassium-transporting ATPase subunit A~TIGRFAM: potassium-transporting ATPase%2C A subunit~PFAM: K transporting ATPase A subunit gene gene1204 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1178 Afer_1179 Afer_1179 Afer_1179 1231739 1232191 + hypothetical protein KEGG: mtf:TBFG_13922 transmembrane protein gene gene1205 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1179 Afer_1180 Afer_1180 Afer_1180 1232188 1233444 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: nca:Noca_3966 major facilitator transporter gene gene1206 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1180 Afer_1181 Afer_1181 Afer_1181 1233610 1235019 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: afe:Lferr_0867 amino acid permease-associated region gene gene1207 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1181 Afer_1182 Afer_1182 Afer_1182 1235050 1235838 - fumarylacetoacetate (FAA) hydrolase PFAM: fumarylacetoacetate (FAA) hydrolase~KEGG: mkm:Mkms_5833 4-oxalocrotonate decarboxylase gene gene1208 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1182 Afer_1183 Afer_1183 Afer_1183 1235964 1237127 - UBA/THIF-type NAD/FAD binding protein PFAM: UBA/THIF-type NAD/FAD binding protein~KEGG: afw:Anae109_0026 hypothetical protein gene gene1209 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1183 Afer_1184 Afer_1184 Afer_1184 1237348 1237470 + hypothetical protein KEGG: mkm:Mkms_0862 transposase IS3/IS911 family protein gene gene1210 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1184 Afer_1185 Afer_1185 Afer_1185 1238279 1238782 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: rha:RHA1_ro01261 RNA polymerase sigma factor SigL gene gene1212 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1185 Afer_1186 Afer_1186 Afer_1186 1238769 1239431 + putative transmembrane anti-sigma factor KEGG: art:Arth_3788 putative transmembrane anti- sigma factor gene gene1213 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1186 Afer_1187 Afer_1187 Afer_1187 1239535 1240038 + putative phosphohistidine phosphatase%2C SixA PFAM: Phosphoglycerate mutase~KEGG: ape:APE_2484.1 phosphohistidine phosphatase SixA gene gene1214 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1187 Afer_1188 Afer_1188 Afer_1188 1240048 1241637 + Exodeoxyribonuclease VII PFAM: Exonuclease VII large subunit%3B nucleic acid binding OB-fold tRNA/helicase-type~KEGG: dsh:Dshi_2727 exodeoxyribonuclease VII%2C large subunit gene gene1215 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1188 Afer_1189 Afer_1189 Afer_1189 1241627 1241914 + hypothetical protein gene gene1216 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1189 Afer_1190 Afer_1190 Afer_1190 1241911 1243164 - aminotransferase class-III PFAM: aminotransferase class-III~KEGG: sen:SACE_3329 adenosylmethionine-8-amino-7- oxononanoate transaminase gene gene1217 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1190 Afer_1191 Afer_1191 Afer_1191 1243187 1244839 - diguanylate cyclase with GAF sensor KEGG: npu:Npun_F1553 diguanylate cyclase with PAS/PAC and GAF sensors~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein%3B GAF domain protein~SMART: GGDEF domain containing protein gene gene1218 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1191 Afer_1192 Afer_1192 Afer_1192 1244953 1246050 - NLP/P60 protein PFAM: NLP/P60 protein~KEGG: ace:Acel_2144 NLP/P60 protein gene gene1219 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1192 Afer_1193 Afer_1193 Afer_1193 1246147 1247331 + L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: sen:SACE_1910 L-carnitine dehydratase/bile acid-inducible protein F gene gene1220 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1193 Afer_1194 Afer_1194 Afer_1194 1247250 1248431 - Amidase PFAM: Amidase~KEGG: bmj:BMULJ_03430 amidase gene gene1221 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1194 Afer_1195 Afer_1195 Afer_1195 1248415 1249284 - hypothetical protein KEGG: scl:sce0507 hypothetical protein gene gene1222 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1195 Afer_1196 Afer_1196 Afer_1196 1249484 1249954 - sugar-phosphate isomerase%2C RpiB/LacA/LacB family KEGG: csc:Csac_1200 RpiB/LacA/LacB family sugar- phosphate isomerase~TIGRFAM: sugar-phosphate isomerase%2C RpiB/LacA/LacB family%3B ribose 5-phosphate isomerase B~PFAM: Ribose/galactose isomerase gene gene1223 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1196 Afer_1197 Afer_1197 Afer_1197 1249951 1250427 - conserved hypothetical protein KEGG: msm:MSMEG_6365 hypothetical protein gene gene1224 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1197 Afer_1198 Afer_1198 Afer_1198 1250484 1251608 - type I phosphodiesterase/nucleotide pyrophosphatase PFAM: type I phosphodiesterase/nucleotide pyrophosphatase%3B PglZ domain protein~KEGG: tfu:Tfu_2126 hypothetical protein gene gene1225 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1198 Afer_1199 Afer_1199 Afer_1199 1251921 1252376 + transcriptional regulator%2C BadM/Rrf2 family TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: protein of unknown function UPF0074~KEGG: abb:ABBFA_001864 rrf2 family protein (transcriptional regulator) family protein gene gene1226 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1199 Afer_1200 Afer_1200 Afer_1200 1252376 1254979 + GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase%3B CoA-binding domain protein~KEGG: sen:SACE_1780 acetyl-CoA synthetase gene gene1227 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1200 Afer_1201 Afer_1201 Afer_1201 1255059 1255541 - Glutathione peroxidase PFAM: glutathione peroxidase~KEGG: nfa:nfa46650 putative glutathione peroxidase gene gene1228 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1201 Afer_1202 Afer_1202 Afer_1202 1255626 1257089 - Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase~KEGG: aau:AAur_1331 putative succinate-semialdehyde dehydrogenase gene gene1229 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1202 Afer_1203 Afer_1203 Afer_1203 1257214 1258827 + protein of unknown function DUF885 PFAM: protein of unknown function DUF885~KEGG: sen:SACE_1720 hypothetical protein gene gene1230 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1203 Afer_1204 Afer_1204 Afer_1204 1258866 1259048 - hypothetical protein gene gene1231 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1204 Afer_1205 Afer_1205 Afer_1205 1259134 1259934 - ABC transporter integral membrane protein KEGG: sco:SCO4586 ABC transporter integral membrane protein gene gene1232 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1205 Afer_1206 Afer_1206 Afer_1206 1259924 1260832 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: aau:AAur_2052 putative antibiotic ABC transporter%2C ATP-binding protein gene gene1233 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1206 Afer_1207 Afer_1207 Afer_1207 1260829 1262007 - hypothetical protein KEGG: sma:SAV_4866 hypothetical protein gene gene1234 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1207 Afer_1208 Afer_1208 Afer_1208 1262859 1263767 + RNA polymerase%2C sigma 70 subunit%2C RpoD subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 3 domain protein%3B sigma-70 region 1.2%3B sigma-70 region 4 domain protein~KEGG: efa:EF1522 RNA polymerase sigma factor RpoD gene gene1235 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1208 Afer_1209 Afer_1209 Afer_1209 1264007 1264936 - pseudouridine synthase%2C RluA family KEGG: tfu:Tfu_1123 ribosomal large subunit pseudouridine synthase D~TIGRFAM: pseudouridine synthase%2C RluA family~PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein gene gene1236 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1209 Afer_1210 Afer_1210 Afer_1210 1264929 1265414 - peptidase A8 signal peptidase II PFAM: peptidase A8 signal peptidase II~KEGG: mgi:Mflv_3640 lipoprotein signal peptidase gene gene1237 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1210 Afer_1211 Afer_1211 Afer_1211 1265462 1265881 + hypothetical protein gene gene1238 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1211 Afer_1212 Afer_1212 Afer_1212 1265951 1269169 + isoleucyl-tRNA synthetase TIGRFAM: isoleucyl-tRNA synthetase~KEGG: kra:Krad_3498 isoleucyl-tRNA synthetase gene gene1239 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1212 Afer_1213 Afer_1213 Afer_1213 1269343 1270968 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: tac:Ta0427 L-asparagine permease related protein gene gene1240 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1213 Afer_1214 Afer_1214 Afer_1214 1271240 1272561 - pseudogene gene1241 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1214 Afer_1215 Afer_1215 Afer_1215 1272791 1273846 - Holliday junction DNA helicase RuvB KEGG: gka:GK2591 Holliday junction DNA helicase B~TIGRFAM: Holliday junction DNA helicase RuvB~PFAM: AAA ATPase central domain protein%3B Holliday junction DNA helicase RuvB domain%3B magnesium chelatase ChlI subunit%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene1242 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1215 Afer_1216 Afer_1216 Afer_1216 1273843 1274412 - Holliday junction DNA helicase RuvA KEGG: afw:Anae109_0993 Holliday junction DNA helicase RuvA~TIGRFAM: Holliday junction DNA helicase RuvA~PFAM: DNA recombination protein RuvA domain I~SMART: Helix-hairpin-helix DNA-binding class 1 gene gene1243 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1216 Afer_1217 Afer_1217 Afer_1217 1274409 1274903 - crossover junction endodeoxyribonuclease RuvC KEGG: mbn:Mboo_0111 crossover junction endodeoxyribonuclease RuvC~TIGRFAM: crossover junction endodeoxyribonuclease RuvC~PFAM: Crossover junction endodeoxyribonuclease RuvC gene gene1244 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1217 Afer_1218 Afer_1218 Afer_1218 1274896 1275357 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Redoxin domain protein~KEGG: fre:Franean1_6190 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen gene gene1245 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1218 Afer_1219 Afer_1219 Afer_1219 1275354 1276106 - protein of unknown function DUF28 PFAM: protein of unknown function DUF28~KEGG: gme:Gmet_0743 hypothetical protein gene gene1246 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1219 Afer_1220 Afer_1220 Afer_1220 1276153 1276791 - SNO glutamine amidotransferase PFAM: SNO glutamine amidotransferase%3B CobB/CobQ domain protein glutamine amidotransferase~KEGG: saq:Sare_1778 SNO glutamine amidotransferase gene gene1247 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1220 Afer_1221 Afer_1221 Afer_1221 1276796 1277683 - pyridoxine biosynthesis protein TIGRFAM: pyridoxine biosynthesis protein~PFAM: Vitamin B6 biosynthesis protein%3B thiazole biosynthesis family protein~KEGG: tfu:Tfu_2099 pyridoxine biosynthesis protein gene gene1248 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1221 Afer_1222 Afer_1222 Afer_1222 1277754 1278539 - hypothetical protein KEGG: saq:Sare_0473 NADH dehydrogenase (quinone) gene gene1249 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1222 Afer_1223 Afer_1223 Afer_1223 1278536 1279603 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: afw:Anae109_4290 phosphatidylinositol alpha- mannosyltransferase gene gene1250 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1223 Afer_1224 Afer_1224 Afer_1224 1279614 1280318 - lipid A biosynthesis acyltransferase PFAM: lipid A biosynthesis acyltransferase~KEGG: tfu:Tfu_2102 lipid A biosynthesis lauroyl acyltransferase gene gene1251 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1224 Afer_1225 Afer_1225 Afer_1225 1280514 1281248 - CDP-alcohol phosphatidyltransferase PFAM: CDP-alcohol phosphatidyltransferase~KEGG: saq:Sare_1773 CDP-alcohol phosphatidyltransferase gene gene1252 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1225 Afer_1226 Afer_1226 Afer_1226 1281423 1283423 + small GTP-binding protein KEGG: rha:RHA1_ro05886 elongation factor EF2~TIGRFAM: small GTP-binding protein~PFAM: elongation factor G domain IV%3B elongation factor G domain protein%3B Miro domain protein%3B GTP-binding protein HSR1-related%3B protein synthesis factor GTP- binding~SMART: AAA ATPase gene gene1253 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1226 Afer_1227 Afer_1227 Afer_1227 1284125 1284496 - Glyoxalase/bleomycin resistance protein/dioxygenase PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase~KEGG: atc:AGR_C_1212 hypothetical protein gene gene1254 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1227 Afer_1228 Afer_1228 Afer_1228 1284902 1285393 - histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: sus:Acid_4300 histidine triad (HIT) protein gene gene1255 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1228 Afer_1229 Afer_1229 Afer_1229 1285393 1287264 - threonyl-tRNA synthetase KEGG: fal:FRAAL5168 threonyl-tRNA synthetase~TIGRFAM: threonyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein%3B Threonyl/alanyl tRNA synthetase SAD gene gene1256 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1229 Afer_1230 Afer_1230 Afer_1230 1287261 1288379 - Cysteine--tRNA ligase PFAM: Cysteinyl-tRNA synthetase class Ia %3B tRNA synthetase class I (M)~KEGG: sma:SAV_6647 cysteinyl-tRNA synthetase gene gene1257 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1230 Afer_1231 Afer_1231 Afer_1231 1288376 1289044 - NADP oxidoreductase coenzyme F420-dependent PFAM: NADP oxidoreductase coenzyme F420-dependent~KEGG: fra:Francci3_3151 reduced coenzyme F420:NADP oxidoreductase gene gene1258 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1231 Afer_1232 Afer_1232 Afer_1232 1289143 1289916 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR~KEGG: sen:SACE_3786 enoyl-(acyl carrier protein) reductase gene gene1259 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1232 Afer_1233 Afer_1233 Afer_1233 1289985 1290752 + hypothetical protein KEGG: predicted gene%2C 100039767 gene gene1260 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1233 Afer_1234 Afer_1234 Afer_1234 1290842 1291798 - Pirin domain protein PFAM: Pirin domain protein~KEGG: ace:Acel_1948 pirin domain-containing protein gene gene1261 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1234 Afer_1235 Afer_1235 Afer_1235 1291824 1292660 - apurinic endonuclease Apn1 KEGG: tfu:Tfu_1956 endonuclease IV~TIGRFAM: apurinic endonuclease Apn1~PFAM: Xylose isomerase domain protein TIM barrel~SMART: AP endonuclease family 2 gene gene1262 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1235 Afer_1236 Afer_1236 Afer_1236 1292790 1293713 - DivIVA family protein PFAM: DivIVA family protein~KEGG: nfa:nfa17740 hypothetical protein gene gene1263 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1236 Afer_1237 Afer_1237 Afer_1237 1293765 1294034 - protein of unknown function YGGT PFAM: protein of unknown function YGGT~KEGG: azc:AZC_3317 hypothetical protein gene gene1264 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1237 Afer_1238 Afer_1238 Afer_1238 1294024 1294563 - protein of unknown function DUF552 PFAM: protein of unknown function DUF552~KEGG: rxy:Rxyl_1486 protein of unknown function DUF552 gene gene1265 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1238 Afer_1239 Afer_1239 Afer_1239 1294560 1295252 - alanine racemase domain protein PFAM: alanine racemase domain protein~KEGG: afw:Anae109_1365 alanine racemase domain- containing protein gene gene1266 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1239 Afer_1240 Afer_1240 Afer_1240 1295249 1295878 - protein of unknown function DUF152 PFAM: protein of unknown function DUF152~KEGG: rxy:Rxyl_1488 protein of unknown function DUF152 gene gene1267 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1240 Afer_1241 Afer_1241 Afer_1241 1295885 1296973 - cell division protein FtsZ TIGRFAM: cell division protein FtsZ~PFAM: Tubulin/FtsZ GTPase%3B Tubulin/FtsZ domain protein~KEGG: sgr:SGR_5423 cell division protein FtsZ gene gene1268 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1241 Afer_1242 Afer_1242 Afer_1242 1297038 1297646 - hypothetical protein KEGG: sen:SACE_5302 putative sugar transport integral membrane protein gene gene1269 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1242 Afer_1243 Afer_1243 Afer_1243 1297709 1298662 - UDP-N-acetylenolpyruvoylglucosamine reductase KEGG: hmo:HM1_2061 udp-N- acetylenolpyruvoylglucosamine reductase~TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase~PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein%3B FAD linked oxidase domain protein gene gene1270 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1243 Afer_1244 Afer_1244 Afer_1244 1298659 1300026 - UDP-N-acetylmuramate/alanine ligase TIGRFAM: UDP-N-acetylmuramate/alanine ligase~PFAM: cytoplasmic peptidoglycan synthetase domain protein%3B Mur ligase middle domain protein~KEGG: pth:PTH_1860 UDP-N-acetylmuramate-alanine ligase gene gene1271 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1244 Afer_1245 Afer_1245 Afer_1245 1300014 1301066 - Undecaprenyldiphospho-muramoylpentapeptidebeta-N -acetylglucosaminyltransferase PFAM: Glycosyltransferase 28 domain%3B glycosyl transferase family 28~KEGG: pzu:PHZ_c2323 UDP-N-acetylglucosamine--N- acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase gene gene1272 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1245 Afer_1246 Afer_1246 Afer_1246 1301063 1302202 - cell cycle protein PFAM: cell cycle protein~KEGG: nfa:nfa17650 putative cell division protein gene gene1273 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1246 Afer_1247 Afer_1247 Afer_1247 1302208 1303521 - UDP-N-acetylmuramoylalanine/D-glutamate ligase TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~KEGG: pth:PTH_1863 UDP-N-acetylmuramoylalanine-D- glutamate ligase gene gene1274 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1247 Afer_1248 Afer_1248 Afer_1248 1303518 1304552 - phospho-N-acetylmuramoyl-pentapeptide-transferase KEGG: fal:FRAAL2193 phospho-N-acetylmuramoyl- pentapeptide-transferase~TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide-transf erase~PFAM: glycosyl transferase family 4 gene gene1275 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1248 Afer_1249 Afer_1249 Afer_1249 1304549 1306048 - UDP-N-acetylmuramyl-tripeptide synthetase TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~KEGG: kra:Krad_3204 UDP-N-acetylmuramyl-tripeptide synthetase gene gene1276 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1249 Afer_1250 Afer_1250 Afer_1250 1306045 1307823 - Peptidoglycan glycosyltransferase PFAM: penicillin-binding protein transpeptidase%3B Penicillin-binding protein dimerization domain~KEGG: ace:Acel_1004 peptidoglycan glycosyltransferase gene gene1277 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1250 Afer_1251 Afer_1251 Afer_1251 1307816 1308244 - hypothetical protein gene gene1278 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1251 Afer_1252 Afer_1252 Afer_1252 1308226 1309185 - S-adenosyl-methyltransferase MraW TIGRFAM: S-adenosyl-methyltransferase MraW~PFAM: methyltransferase~KEGG: ace:Acel_1002 S-adenosyl-methyltransferase MraW gene gene1279 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1252 Afer_1253 Afer_1253 Afer_1253 1309178 1309600 - protein of unknown function UPF0040 PFAM: protein of unknown function UPF0040~KEGG: cth:Cthe_0982 MraZ protein gene gene1280 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1253 Afer_1254 Afer_1254 Afer_1254 1309909 1310565 - biotin/lipoate A/B protein ligase PFAM: biotin/lipoate A/B protein ligase~KEGG: cau:Caur_3882 biotin/lipoate A/B protein ligase gene gene1281 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1254 Afer_1255 Afer_1255 Afer_1255 1310687 1310962 + transcriptional regulator%2C AsnC family PFAM: regulatory protein AsnC/Lrp family~KEGG: sma:SAV_2677 hypothetical protein gene gene1282 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1255 Afer_1256 Afer_1256 Afer_1256 1310925 1311473 - hypothetical protein gene gene1283 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1256 Afer_1257 Afer_1257 Afer_1257 1311587 1312831 + peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1~KEGG: hya:HY04AAS1_1111 peptidase S11 D-alanyl-D- alanine carboxypeptidase 1 gene gene1284 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1257 Afer_1258 Afer_1258 Afer_1258 1313001 1315055 - hypothetical protein KEGG: hypothetical LOC798921 gene gene1285 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1258 Afer_1259 Afer_1259 Afer_1259 1315637 1316272 - phosphoesterase PA-phosphatase related PFAM: phosphoesterase PA-phosphatase related~SMART: phosphoesterase PA-phosphatase related~KEGG: nca:Noca_2059 undecaprenyl-diphosphatase gene gene1288 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1259 Afer_1260 Afer_1260 Afer_1260 1316365 1317249 - RNA polymerase%2C sigma 32 subunit%2C RpoH TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B sigma-70 region 3 domain protein%3B sigma-70 region 4 domain protein~KEGG: cau:Caur_3583 RNA polymerase sigma factor RpoD gene gene1289 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1260 Afer_1261 Afer_1261 Afer_1261 1317246 1319012 - DNA primase KEGG: fra:Francci3_1282 DNA primase~TIGRFAM: DNA primase~PFAM: zinc finger CHC2-family protein%3B DNA primase catalytic core domain%3B TOPRIM domain protein~SMART: zinc finger CHC2-family protein%3B Toprim sub domain protein gene gene1290 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1261 Afer_1262 Afer_1262 Afer_1262 1319023 1321656 - pyruvate%2C phosphate dikinase KEGG: nca:Noca_0987 pyruvate phosphate dikinase~TIGRFAM: pyruvate%2C phosphate dikinase~PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding%3B PEP-utilising protein mobile region%3B PEP- utilizing protein gene gene1291 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1262 Afer_1263 Afer_1263 Afer_1263 1321747 1323093 - glycyl-tRNA synthetase TIGRFAM: glycyl-tRNA synthetase~PFAM: tRNA synthetase class II (G H P and S)%3B Anticodon-binding domain protein~KEGG: deb:DehaBAV1_0713 glycyl-tRNA synthetase gene gene1292 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1263 Afer_1264 Afer_1264 Afer_1264 1323122 1323871 - DNA repair protein RecO TIGRFAM: DNA repair protein RecO~PFAM: Recombination protein O RecO~KEGG: nca:Noca_1930 DNA repair protein RecO gene gene1293 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1264 Afer_1265 Afer_1265 Afer_1265 1323868 1324068 - hypothetical protein gene gene1294 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1265 Afer_1266 Afer_1266 Afer_1266 1324065 1324790 - undecaprenyl diphosphate synthase KEGG: tfu:Tfu_0853 undecaprenyl pyrophosphate synthetase~TIGRFAM: undecaprenyl diphosphate synthase~PFAM: Di-trans-poly-cis-decaprenylcistransferase gene gene1295 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1266 Afer_1267 Afer_1267 Afer_1267 1324801 1325256 - Domain of unknown function DUF1794 PFAM: Domain of unknown function DUF1794~KEGG: cef:CE1476 hypothetical protein gene gene1296 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1267 Afer_1268 Afer_1268 Afer_1268 1325322 1326185 - GTP-binding protein Era TIGRFAM: GTP-binding protein Era%3B small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B KH type 2 domain protein~KEGG: mpo:Mpop_2233 GTP-binding protein Era gene gene1297 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1268 Afer_1269 Afer_1269 Afer_1269 1326175 1327437 - CBS domain containing protein PFAM: CBS domain containing protein%3B protein of unknown function DUF21%3B transporter-associated region~SMART: CBS domain containing protein~KEGG: cpf:CPF_0036 putative transporter gene gene1298 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1269 Afer_1270 Afer_1270 Afer_1270 1327434 1327979 - protein of unknown function UPF0054 PFAM: protein of unknown function UPF0054~KEGG: saq:Sare_3831 putative metalloprotease gene gene1299 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1270 Afer_1271 Afer_1271 Afer_1271 1327972 1328961 - PhoH family protein PFAM: PhoH family protein~KEGG: stp:Strop_3453 PhoH family protein gene gene1300 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1271 Afer_1272 Afer_1272 Afer_1272 1329022 1329486 + hypothetical protein KEGG: hypothetical protein gene gene1301 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1272 Afer_1273 Afer_1273 Afer_1273 1329546 1329785 - DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family~KEGG: hypothetical protein gene gene1302 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1273 Afer_1274 Afer_1274 Afer_1274 1329958 1330671 + SAF domain protein PFAM: SAF domain protein~KEGG: aau:AAur_pTC10012 hypothetical protein gene gene1303 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1274 Afer_1275 Afer_1275 Afer_1275 1330664 1331893 + hypothetical protein gene gene1304 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1275 Afer_1276 Afer_1276 Afer_1276 1331857 1332729 - beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: sco:SCO3572 hydrolase gene gene1305 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1276 Afer_1277 Afer_1277 Afer_1277 1332746 1333942 + type II secretion system protein E PFAM: type II secretion system protein E~SMART: AAA ATPase~KEGG: kra:Krad_3789 type II secretion system protein E gene gene1306 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1277 Afer_1278 Afer_1278 Afer_1278 1333939 1334757 + hypothetical protein KEGG: mul:MUL_4231 hypothetical protein gene gene1307 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1278 Afer_1279 Afer_1279 Afer_1279 1334754 1335557 + hypothetical protein KEGG: kra:Krad_3788 type II secretion system protein gene gene1308 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1279 Afer_1280 Afer_1280 Afer_1280 1335706 1337233 - pseudogene gene1309 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1280 Afer_1281 Afer_1281 Afer_1281 1337417 1337689 + hypothetical protein gene gene1310 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1281 Afer_1282 Afer_1282 Afer_1282 1337736 1338032 + conserved hypothetical protein KEGG: hypothetical protein gene gene1311 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1282 Afer_1283 Afer_1283 Afer_1283 1338106 1338417 + hypothetical protein gene gene1312 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1283 Afer_1284 Afer_1284 Afer_1284 1338407 1338829 + hypothetical protein KEGG: rso:RS05070 putative hemagglutinin/hemolysin- related protein gene gene1313 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1284 Afer_1285 Afer_1285 Afer_1285 1338839 1339708 + protein tyrosine/serine phosphatase KEGG: fre:Franean1_3861 protein tyrosine/serine phosphatase gene gene1314 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1285 Afer_1286 Afer_1286 Afer_1286 1339925 1341901 + acetate/CoA ligase TIGRFAM: acetate/CoA ligase~PFAM: AMP-dependent synthetase and ligase~KEGG: ace:Acel_1984 acetyl-coenzyme A synthetase gene gene1315 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1286 Afer_1287 Afer_1287 Afer_1287 1341916 1342683 + GPR1/FUN34/yaaH family protein PFAM: GPR1/FUN34/yaaH family protein~KEGG: pth:PTH_2591 hypothetical protein gene gene1316 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1287 Afer_1288 Afer_1288 Afer_1288 1342658 1342963 - hypothetical protein gene gene1317 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1288 Afer_1289 Afer_1289 Afer_1289 1343204 1343464 - hypothetical protein gene gene1318 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1289 Afer_1290 Afer_1290 Afer_1290 1343475 1344566 - Coproporphyrinogen dehydrogenase KEGG: ace:Acel_0781 coproporphyrinogen III oxidase%2C anaerobic~PFAM: Radical SAM domain protein%3B HemN domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene1319 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1290 Afer_1291 Afer_1291 Afer_1291 1344563 1345147 - helix-turn-helix domain protein PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: fre:Franean1_2773 XRE family transcriptional regulator gene gene1320 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1291 Afer_1292 Afer_1292 Afer_1292 1345199 1345924 - protein of unknown function DUF558 PFAM: protein of unknown function DUF558~KEGG: afw:Anae109_0268 hypothetical protein gene gene1321 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1292 Afer_1293 Afer_1293 Afer_1293 1345927 1347045 - chaperone protein DnaJ KEGG: sth:STH505 heat shock protein%2C DnaJ~TIGRFAM: chaperone protein DnaJ~PFAM: chaperone DnaJ domain protein%3B DnaJ central domain protein%3B heat shock protein DnaJ domain protein~SMART: heat shock protein DnaJ domain protein gene gene1322 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1293 Afer_1294 Afer_1294 Afer_1294 1347078 1348088 - heat-inducible transcription repressor HrcA TIGRFAM: heat-inducible transcription repressor HrcA~PFAM: Negative regulator of class I heat shock protein~KEGG: eli:ELI_06015 heat-inducible transcription repressor gene gene1323 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1294 Afer_1295 Afer_1295 Afer_1295 1348204 1348473 - ribosomal protein S20 TIGRFAM: ribosomal protein S20~PFAM: ribosomal protein S20~KEGG: fre:Franean1_2105 ribosomal protein S20 gene gene1324 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1295 Afer_1296 Afer_1296 Afer_1296 1348673 1350460 + GTP-binding protein LepA TIGRFAM: GTP-binding protein LepA%3B small GTP- binding protein~PFAM: GTP-binding protein LepA domain protein%3B elongation factor G domain protein%3B protein synthesis factor GTP-binding~KEGG: ace:Acel_0778 GTP-binding protein LepA gene gene1325 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1296 Afer_1297 Afer_1297 Afer_1297 1350498 1351256 + hypothetical protein KEGG: fre:Franean1_3800 heat shock protein 70 gene gene1326 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1297 Afer_1298 Afer_1298 Afer_1298 1351219 1351737 - hypothetical protein gene gene1327 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1298 Afer_1299 Afer_1299 Afer_1299 1351914 1352633 - ApbE family lipoprotein PFAM: ApbE family lipoprotein~KEGG: sma:SAV_6768 thiamine biosynthesis lipoprotein precursor gene gene1328 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1299 Afer_1300 Afer_1300 Afer_1300 1352630 1353097 - FMN-binding domain protein PFAM: FMN-binding domain protein~KEGG: ace:Acel_0050 FMN-binding domain-containing protein gene gene1329 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1300 Afer_1301 Afer_1301 Afer_1301 1353107 1354450 - ferric reductase domain protein transmembrane component PFAM: Ferric reductase domain protein transmembrane component domain%3B FAD-binding 8 domain protein%3B Oxidoreductase FAD-binding domain protein~KEGG: sma:SAV_2194 oxidoreductase gene gene1330 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1301 Afer_1302 Afer_1302 Afer_1302 1354539 1355909 + Deoxyribodipyrimidine photo-lyase PFAM: DNA photolyase FAD-binding~KEGG: fal:FRAAL0101 deoxyribodipyrimidine photo- lyase gene gene1331 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1302 Afer_1303 Afer_1303 Afer_1303 1355809 1356816 - DNA polymerase III delta subunit-like protein KEGG: rha:RHA1_ro01286 DNA polymerase III delta subunit gene gene1332 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1303 Afer_1304 Afer_1304 Afer_1304 1356819 1357664 - dihydropteroate synthase KEGG: ace:Acel_1839 dihydropteroate synthase~TIGRFAM: dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS gene gene1333 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1304 Afer_1305 Afer_1305 Afer_1305 1357667 1358374 - thioredoxin TIGRFAM: thioredoxin~PFAM: Thioredoxin domain~KEGG: cau:Caur_0205 thioredoxin domain-containing protein gene gene1334 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1305 Afer_1306 Afer_1306 Afer_1306 1358450 1359313 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: nca:Noca_0658 aldo/keto reductase gene gene1335 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1306 Afer_1307 Afer_1307 Afer_1307 1359310 1360089 + alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: met:M446_4655 3-oxoadipate enol-lactonase gene gene1336 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1307 Afer_1308 Afer_1308 Afer_1308 1360086 1360790 - leucyl/phenylalanyl-tRNA/protein transferase KEGG: kra:Krad_3260 leucyl/phenylalanyl-tRNA-- protein transferase~TIGRFAM: leucyl/phenylalanyl-tRNA/protein transferase~PFAM: leucyl/phenylalanyl-tRNA--protein transferase gene gene1337 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1308 Afer_1309 Afer_1309 Afer_1309 1360801 1361451 - pyridoxamine 5'-phosphate oxidase-related%2C FMN- binding KEGG: mva:Mvan_4367 pyridoxamine 5'-phosphate oxidase-related%2C FMN-binding gene gene1338 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1309 Afer_1310 Afer_1310 Afer_1310 1361495 1362241 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: sma:SAV_5911 ABC transporter ATP-binding protein gene gene1339 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1310 Afer_1311 Afer_1311 Afer_1311 1362271 1363677 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: lxx:Lxx03110 integral membrane protein gene gene1340 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1311 Afer_1312 Afer_1312 Afer_1312 1364310 1365274 - pseudogene gene1341 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1312 Afer_1313 Afer_1313 Afer_1313 1365593 1366219 - pseudogene gene1342 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1313 Afer_1314 Afer_1314 Afer_1314 1366433 1367374 + restriction endonuclease-like protein KEGG: ank:AnaeK_3975 restriction endonuclease-like protein gene gene1344 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1314 Afer_1315 Afer_1315 Afer_1315 1367396 1367725 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene1345 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1315 Afer_1316 Afer_1316 Afer_1316 1367722 1368600 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: amr:AM1_A0193 integrase%2C catalytic region gene gene1346 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1316 Afer_1317 Afer_1317 Afer_1317 1368866 1368955 - pseudogene gene1347 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1317 Afer_1318 Afer_1318 Afer_1318 1368968 1371404 + pseudogene gene1348 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1318 Afer_1319 Afer_1319 Afer_1319 1369292 1370170 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: rha:RHA1_ro11026 transposase gene gene1349 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1319 Afer_1320 Afer_1320 Afer_1320 1370167 1370496 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_2226 transposase IS3/IS911 gene gene1350 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1320 Afer_1321 Afer_1321 Afer_1321 1371434 1372252 - integrase family protein KEGG: fre:Franean1_5518 integrase family protein gene gene1351 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1321 Afer_1322 Afer_1322 Afer_1322 1372485 1374932 + leucyl-tRNA synthetase TIGRFAM: leucyl-tRNA synthetase~KEGG: dau:Daud_1865 leucyl-tRNA synthetase gene gene1353 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1322 Afer_1323 Afer_1323 Afer_1323 1375029 1376555 + transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: mva:Mvan_4071 transposase%2C IS4 family protein gene gene1354 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1323 Afer_1324 Afer_1324 Afer_1324 1377379 1378044 - peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin~KEGG: sco:SCO2328 dipeptidase gene gene1356 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1324 Afer_1325 Afer_1325 Afer_1325 1378106 1379500 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: mmi:MMAR_2052 amino acid transporter gene gene1357 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1325 Afer_1326 Afer_1326 Afer_1326 1379635 1380429 + GntR domain protein PFAM: GntR domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: msm:MSMEG_2682 transcriptional regulator gene gene1358 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1326 Afer_1327 Afer_1327 Afer_1327 1380597 1381763 - ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: tfu:Tfu_1763 ABC-type sugar transport systems ATPase components gene gene1359 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1327 Afer_1328 Afer_1328 Afer_1328 1381772 1383412 - alpha amylase catalytic region PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain~KEGG: bra:BRADO0511 alpha-glucosidase gene gene1360 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1328 Afer_1329 Afer_1329 Afer_1329 1383428 1384267 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sen:SACE_6264 putative multiple sugar transport system permease protein gene gene1361 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1329 Afer_1330 Afer_1330 Afer_1330 1384267 1385217 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: sen:SACE_6263 ABC sugar transporter%2C permease component gene gene1362 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1330 Afer_1331 Afer_1331 Afer_1331 1385356 1386750 - extracellular solute-binding protein family 1 PFAM: extracellular solute-binding protein family 1~KEGG: sen:SACE_6262 putative ABC transporter substrate-binding protein gene gene1363 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1331 Afer_1332 Afer_1332 Afer_1332 1386814 1387947 - transcriptional regulator%2C LacI family KEGG: nca:Noca_3918 LacI family transcription regulator~PFAM: regulatory protein LacI%3B periplasmic binding protein/LacI transcriptional regulator~SMART: regulatory protein LacI gene gene1364 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1332 Afer_1333 Afer_1333 Afer_1333 1388637 1389095 - hypothetical protein KEGG: glo:Glov_2391 drug resistance transporter%2C EmrB/QacA subfamily gene gene1365 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1333 Afer_1334 Afer_1334 Afer_1334 1389178 1390185 + hypothetical protein KEGG: rso:RSc1428 hypothetical protein gene gene1366 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1334 Afer_1335 Afer_1335 Afer_1335 1390837 1391454 - serine O-acetyltransferase TIGRFAM: serine O-acetyltransferase~KEGG: mmi:MMAR_3646 serine acetyltransferase CysE gene gene1368 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1335 Afer_1336 Afer_1336 Afer_1336 1391454 1392389 - cysteine synthase A TIGRFAM: cysteine synthase A%3B cysteine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: fal:FRAAL3350 subunit of cysteine synthase A and O-acetylserine sulfhydrolase A%2C PLP-dependent enzyme gene gene1369 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1336 Afer_1337 Afer_1337 Afer_1337 1392480 1393364 - HhH-GPD family protein PFAM: HhH-GPD family protein~SMART: HhH-GPD family protein~KEGG: mjl:Mjls_5132 HhH-GPD family protein gene gene1370 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1337 Afer_1338 Afer_1338 Afer_1338 1393608 1394300 + putative transcriptional regulator SMART: regulatory protein ArsR~KEGG: stp:Strop_2302 regulatory protein%2C ArsR gene gene1371 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1338 Afer_1339 Afer_1339 Afer_1339 1394297 1395586 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: stp:Strop_2289 major facilitator transporter gene gene1372 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1339 Afer_1340 Afer_1340 Afer_1340 1395785 1396729 - hypothetical protein KEGG: MUC17%3B mucin 17%2C cell surface associated gene gene1373 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1340 Afer_1341 Afer_1341 Afer_1341 1397197 1397580 - protein of unknown function DUF86 PFAM: protein of unknown function DUF86~KEGG: mla:Mlab_0885 hypothetical protein gene gene1374 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1341 Afer_1342 Afer_1342 Afer_1342 1397549 1397884 - DNA polymerase beta domain protein region PFAM: DNA polymerase beta domain protein region~KEGG: rca:Rcas_2416 DNA polymerase beta subunit gene gene1375 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1342 Afer_1343 Afer_1343 Afer_1343 1398363 1399463 - methyl-accepting chemotaxis sensory transducer PFAM: chemotaxis sensory transducer~SMART: chemotaxis sensory transducer~KEGG: glo:Glov_1832 methyl-accepting chemotaxis sensory transducer gene gene1377 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1343 Afer_1344 Afer_1344 Afer_1344 1399614 1400549 - beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: sma:SAV_6616 polyketide cyclase gene gene1378 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1344 Afer_1345 Afer_1345 Afer_1345 1400539 1400736 - hypothetical protein gene gene1379 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1345 Afer_1346 Afer_1346 Afer_1346 1400775 1402301 - Propionyl-CoA carboxylase PFAM: carboxyl transferase~KEGG: saq:Sare_0033 propionyl-CoA carboxylase gene gene1380 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1346 Afer_1347 Afer_1347 Afer_1347 1402317 1403606 - small GTP-binding protein TIGRFAM: small GTP-binding protein~PFAM: GTP-binding protein HSR1-related%3B Miro domain protein~KEGG: ace:Acel_1233 small GTP-binding protein gene gene1381 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1347 Afer_1348 Afer_1348 Afer_1348 1403603 1404955 - protein of unknown function DUF512 PFAM: protein of unknown function DUF512~KEGG: syw:SYNW2188 Fe-S oxidoreductase gene gene1382 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1348 Afer_1349 Afer_1349 Afer_1349 1405015 1406049 + hydroxymethylbutenyl pyrophosphate reductase KEGG: ace:Acel_1858 4-hydroxy-3-methylbut-2-enyl diphosphate reductase~TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase~PFAM: LytB protein gene gene1383 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1349 Afer_1350 Afer_1350 Afer_1350 1406073 1406840 - phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: syn:sll1848 putative 1-acyl-sn-glycerol-3- phosphate acyltransferase gene gene1384 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1350 Afer_1351 Afer_1351 Afer_1351 1406837 1407439 - cytidylate kinase region PFAM: cytidylate kinase region~KEGG: mul:MUL_3233 cytidylate kinase gene gene1385 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1351 Afer_1352 Afer_1352 Afer_1352 1407631 1408584 + peptidase M48 Ste24p PFAM: peptidase M48 Ste24p~KEGG: ace:Acel_0952 heat shock protein HtpX gene gene1386 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1352 Afer_1353 Afer_1353 Afer_1353 1408587 1409192 + conserved hypothetical protein KEGG: ace:Acel_0953 hypothetical protein gene gene1387 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1353 Afer_1354 Afer_1354 Afer_1354 1409189 1410493 - 3-phosphoshikimate 1-carboxyvinyltransferase KEGG: syr:SynRCC307_1150 3-phosphoshikimate 1- carboxyvinyltransferase~TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase) gene gene1388 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1354 Afer_1355 Afer_1355 Afer_1355 1410503 1410865 - chorismate mutase TIGRFAM: chorismate mutase~PFAM: Chorismate mutase of the AroH class~KEGG: nca:Noca_2499 chorismate mutase gene gene1389 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1355 Afer_1356 Afer_1356 Afer_1356 1410828 1411592 - pseudouridine synthase PFAM: pseudouridine synthase%3B RNA-binding S4 domain protein~SMART: RNA-binding S4 domain protein~KEGG: krh:KRH_15230 pseudouridine synthase gene gene1390 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1356 Afer_1357 Afer_1357 Afer_1357 1411589 1412155 - chromosome segregation and condensation protein%2C ScpB PFAM: chromosome segregation and condensation protein ScpB~KEGG: ace:Acel_1237 condensin subunit ScpB gene gene1391 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1357 Afer_1358 Afer_1358 Afer_1358 1412148 1412843 - conserved hypothetical protein KEGG: cmi:CMM_1979 hypothetical protein gene gene1392 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1358 Afer_1359 Afer_1359 Afer_1359 1412821 1413324 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: mxa:MXAN_3222 acetyltransferase%2C GNAT family gene gene1393 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1359 Afer_1360 Afer_1360 Afer_1360 1413377 1414636 - protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein%3B 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: ank:AnaeK_2951 protein of unknown function DUF224 cysteine-rich region domain protein gene gene1394 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1360 Afer_1361 Afer_1361 Afer_1361 1414633 1415724 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: cyb:CYB_2695 FAD-binding protein gene gene1395 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1361 Afer_1362 Afer_1362 Afer_1362 1415718 1417184 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: sen:SACE_6366 glycolate oxidase subunit gene gene1396 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1362 Afer_1363 Afer_1363 Afer_1363 1417237 1417989 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B NAD- dependent epimerase/dehydratase~KEGG: afw:Anae109_1109 short-chain dehydrogenase/reductase SDR gene gene1397 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1363 Afer_1364 Afer_1364 Afer_1364 1418126 1419160 + metal-dependent phosphohydrolase HD subdomain protein PFAM: metal-dependent phosphohydrolase HD sub domain~SMART: metal-dependent phosphohydrolase HD region~KEGG: pac:PPA0955 deoxyguanosinetriphosphate triphosphohydrolase gene gene1398 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1364 Afer_1365 Afer_1365 Afer_1365 1419197 1419748 + transcriptional regulator%2C PadR-like family PFAM: transcriptional regulator PadR family protein~KEGG: sgr:SGR_6165 PadR-like family transcriptional regulator gene gene1399 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1365 Afer_1366 Afer_1366 Afer_1366 1419836 1420177 - protein of unknown function DUF1291 PFAM: protein of unknown function DUF1291~KEGG: sto:ST0089 hypothetical protein gene gene1400 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1366 Afer_1367 Afer_1367 Afer_1367 1420430 1421938 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: abo:ABO_0184 long-chain-fatty-acid-CoA ligase%2C putative gene gene1401 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1367 Afer_1368 Afer_1368 Afer_1368 1422011 1422334 + protein of unknown function DUF74 PFAM: protein of unknown function DUF74~KEGG: mmi:MMAR_5292 hypothetical protein gene gene1402 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1368 Afer_1369 Afer_1369 Afer_1369 1422417 1422665 - hypothetical protein KEGG: nfa:pnf2670 hypothetical protein gene gene1403 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1369 Afer_1370 Afer_1370 Afer_1370 1422819 1424018 - acetyl-CoA acetyltransferase TIGRFAM: acetyl-CoA acetyltransferase~PFAM: Thiolase~KEGG: stp:Strop_1359 beta-ketoadipyl CoA thiolase gene gene1404 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1370 Afer_1371 Afer_1371 Afer_1371 1424015 1424452 - phenylacetic acid degradation protein PaaD TIGRFAM: phenylacetic acid degradation protein PaaD~PFAM: thioesterase superfamily protein~KEGG: pde:Pden_4800 phenylacetic acid degradation protein PaaD gene gene1405 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1371 Afer_1372 Afer_1372 Afer_1372 1424449 1425081 - transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: lch:Lcho_2402 TetR family transcriptional regulator gene gene1406 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1372 Afer_1373 Afer_1373 Afer_1373 1425078 1425878 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: krh:KRH_02100 putative enoyl-CoA hydratase PaaG gene gene1407 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1373 Afer_1374 Afer_1374 Afer_1374 1425884 1426672 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: stp:Strop_0164 enoyl-CoA hydratase/isomerase gene gene1408 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1374 Afer_1375 Afer_1375 Afer_1375 1426666 1427532 - 3-hydroxyacyl-CoA dehydrogenase NAD-binding PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: ace:Acel_0147 3-hydroxyacyl-CoA dehydrogenase gene gene1409 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1375 Afer_1376 Afer_1376 Afer_1376 1427505 1428512 - conserved hypothetical protein KEGG: dar:Daro_0369 hypothetical protein gene gene1410 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1376 Afer_1377 Afer_1377 Afer_1377 1428619 1429653 + ferredoxin PFAM: ferredoxin%3B Oxidoreductase FAD-binding domain protein%3B oxidoreductase FAD/NAD(P)-binding domain protein~KEGG: dar:Daro_0368 ferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region gene gene1411 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1377 Afer_1378 Afer_1378 Afer_1378 1429676 1432603 + Aldehyde Dehydrogenase PFAM: Aldehyde Dehydrogenase%3B Proline dehydrogenase~KEGG: ote:Oter_0715 aldehyde dehydrogenase gene gene1412 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1378 Afer_1379 Afer_1379 Afer_1379 1432739 1434055 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ade:Adeh_3709 major facilitator transporter gene gene1413 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1379 Afer_1380 Afer_1380 Afer_1380 1434355 1435503 + ABC polyamine/opine/phosphonate transporter%2C periplasmic ligand binding protein KEGG: msm:MSMEG_6524 ABC polyamine/opine/phosphonate transporter%2C periplasmic ligand binding protein gene gene1414 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1380 Afer_1381 Afer_1381 Afer_1381 1435488 1436390 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: acr:Acry_0983 binding-protein-dependent transport systems inner membrane component gene gene1415 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1381 Afer_1382 Afer_1382 Afer_1382 1436387 1437166 + binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bpy:Bphyt_0516 binding-protein-dependent transport systems inner membrane component gene gene1416 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1382 Afer_1383 Afer_1383 Afer_1383 1437175 1438281 + ABC transporter related PFAM: ABC transporter related%3B Transport-associated OB domain protein~SMART: AAA ATPase~KEGG: mva:Mvan_5739 ABC transporter-related protein gene gene1417 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1383 Afer_1384 Afer_1384 Afer_1384 1438278 1439918 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: nca:Noca_3235 metallophosphoesterase gene gene1418 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1384 Afer_1385 Afer_1385 Afer_1385 1439915 1442722 - diguanylate cyclase/phosphodiesterase KEGG: afe:Lferr_1405 diguanylate cyclase/phosphodiesterase~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene1419 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1385 Afer_1386 Afer_1386 Afer_1386 1443317 1443865 + hypothetical protein KEGG: predicted gene%2C 100039767 gene gene1421 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1386 Afer_1387 Afer_1387 Afer_1387 1444024 1445550 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: mva:Mvan_4071 transposase%2C IS4 family protein gene gene1422 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1387 Afer_1388 Afer_1388 Afer_1388 1445636 1446256 - hypothetical protein KEGG: nfa:nfa2450 hypothetical protein gene gene1423 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1388 Afer_1389 Afer_1389 Afer_1389 1446343 1447671 + pseudogene gene1424 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1389 Afer_1390 Afer_1390 Afer_1390 1447912 1448160 + hypothetical protein gene gene1425 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1390 Afer_1391 Afer_1391 Afer_1391 1448275 1448463 - hypothetical protein gene gene1426 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1391 Afer_1392 Afer_1392 Afer_1392 1448727 1449662 + pseudogene gene1427 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1392 Afer_1393 Afer_1393 Afer_1393 1449743 1452724 - type III restriction protein res subunit PFAM: type III restriction protein res subunit~KEGG: cte:CT0911 type III restriction system endonuclease gene gene1428 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1393 Afer_1394 Afer_1394 Afer_1394 1452724 1454679 - DNA methylase N-4/N-6 domain protein PFAM: DNA methylase N-4/N-6 domain protein~KEGG: bpt:Bpet4236 type III restriction system methylase gene gene1429 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1394 Afer_1395 Afer_1395 Afer_1395 1454691 1455449 - conserved hypothetical protein KEGG: pph:Ppha_1127 hypothetical protein gene gene1430 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1395 Afer_1396 Afer_1396 Afer_1396 1455446 1458643 - helicase domain protein PFAM: helicase domain protein%3B SNF2-related protein~SMART: helicase domain protein%3B DEAD-like helicases~KEGG: cte:CT0906 DNA-dependent ATPase%2C SNF2 family protein gene gene1431 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1396 Afer_1397 Afer_1397 Afer_1397 1458651 1459880 - hypothetical protein gene gene1432 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1397 Afer_1398 Afer_1398 Afer_1398 1460181 1460696 - GETHR pentapeptide repeat-containing protein PFAM: GETHR pentapeptide repeat-containing protein~KEGG: fal:FRAAL3726 pentapeptide repeat-containing protein gene gene1433 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1398 Afer_1399 Afer_1399 Afer_1399 1460962 1462488 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: mva:Mvan_4071 transposase%2C IS4 family protein gene gene1434 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1399 Afer_1400 Afer_1400 Afer_1400 1462585 1463679 - secreted protein KEGG: ace:Acel_1702 secreted protein gene gene1435 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1400 Afer_1401 Afer_1401 Afer_1401 1463720 1464679 - diguanylate phosphodiesterase PFAM: EAL domain protein~SMART: EAL domain protein~KEGG: azo:azo1486 conserved hypothetical signaling protein gene gene1436 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1401 Afer_1402 Afer_1402 Afer_1402 1464676 1465794 - diguanylate phosphodiesterase PFAM: EAL domain protein~SMART: EAL domain protein~KEGG: fal:FRAAL5844 hypothetical protein gene gene1437 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1402 Afer_1403 Afer_1403 Afer_1403 1466256 1466705 + conserved hypothetical protein KEGG: cma:Cmaq_0484 hypothetical protein gene gene1438 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1403 Afer_1404 Afer_1404 Afer_1404 1466762 1467019 + SirA family protein KEGG: kcr:Kcr_1535 SirA family protein gene gene1439 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1404 Afer_1405 Afer_1405 Afer_1405 1467021 1468199 + FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: cma:Cmaq_0486 FAD-dependent pyridine nucleotide-disulphide oxidoreductase gene gene1440 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1405 Afer_1406 Afer_1406 Afer_1406 1468240 1468497 - hypothetical protein gene gene1441 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1406 Afer_1407 Afer_1407 Afer_1407 1469510 1469899 - protein of unknown function DUF488 PFAM: protein of unknown function DUF488~KEGG: afe:Lferr_0982 protein of unknown function DUF488 gene gene1443 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1407 Afer_1408 Afer_1408 Afer_1408 1469921 1472188 - aconitate hydratase KEGG: bba:Bd2784 aconitate hydratase~TIGRFAM: aconitate hydratase~PFAM: aconitate hydratase domain protein gene gene1444 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1408 Afer_1409 Afer_1409 Afer_1409 1472262 1473020 + transcriptional regulator%2C GntR family PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: sgr:SGR_1276 GntR family transcriptional regulator gene gene1445 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1409 Afer_1410 Afer_1410 Afer_1410 1473106 1474482 + permease for cytosine/purines uracil thiamine allantoin PFAM: permease for cytosine/purines uracil thiamine allantoin~KEGG: acr:Acry_2484 permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin gene gene1446 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1410 Afer_1411 Afer_1411 Afer_1411 1474479 1475327 + transcriptional regulator%2C RpiR family PFAM: helix-turn-helix protein RpiR%3B sugar isomerase (SIS)~KEGG: rxy:Rxyl_0574 transcriptional regulator%2C RpiR family gene gene1447 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1411 Afer_1412 Afer_1412 Afer_1412 1475324 1476505 + amidase%2C hydantoinase/carbamoylase family KEGG: sgr:SGR_4463 M20/M25/M40 family peptidase~TIGRFAM: amidase%2C hydantoinase/carbamoylase family~PFAM: peptidase M20 gene gene1448 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1412 Afer_1413 Afer_1413 Afer_1413 1476502 1477812 + amidohydrolase PFAM: amidohydrolase~KEGG: kra:Krad_4451 N-formimino-L-glutamate deiminase gene gene1449 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1413 Afer_1414 Afer_1414 Afer_1414 1477809 1479467 + urocanate hydratase KEGG: acr:Acry_1749 urocanate hydratase~TIGRFAM: urocanate hydratase~PFAM: Urocanase gene gene1450 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1414 Afer_1415 Afer_1415 Afer_1415 1479455 1480654 + imidazolonepropionase KEGG: mmr:Mmar10_1604 imidazolonepropionase~TIGRFAM: imidazolonepropionase~PFAM: amidohydrolase%3B Amidohydrolase 3 gene gene1451 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1415 Afer_1416 Afer_1416 Afer_1416 1480972 1481496 - phage tail protein TIGRFAM: phage tail protein~KEGG: fre:Franean1_3826 phage tail protein gene gene1452 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1416 Afer_1417 Afer_1417 Afer_1417 1481505 1483457 - conserved hypothetical protein KEGG: sco:SCO4244 hypothetical protein gene gene1453 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1417 Afer_1418 Afer_1418 Afer_1418 1483457 1483894 - GPW/gp25 family protein PFAM: GPW/gp25 family protein~KEGG: sgr:SGR_2075 hypothetical protein gene gene1454 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1418 Afer_1419 Afer_1419 Afer_1419 1483925 1486573 - hypothetical protein KEGG: ade:Adeh_0244 LigA gene gene1455 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1419 Afer_1420 Afer_1420 Afer_1420 1486570 1487046 - conserved hypothetical protein TIGRFAM: conserved hypothetical protein~KEGG: gsu:GSU0979 hypothetical protein gene gene1456 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1420 Afer_1421 Afer_1421 Afer_1421 1487043 1487216 - conserved hypothetical protein KEGG: mlo:msr6553 hypothetical protein gene gene1457 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1421 Afer_1422 Afer_1422 Afer_1422 1487213 1487686 - hypothetical protein KEGG: fre:Franean1_3818 secreted protein gene gene1458 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1422 Afer_1423 Afer_1423 Afer_1423 1487690 1488172 - conserved hypothetical protein TIGRFAM: conserved hypothetical protein~KEGG: fre:Franean1_3817 phage tail protein gene gene1459 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1423 Afer_1424 Afer_1424 Afer_1424 1488188 1489756 - tail sheath protein PFAM: tail sheath protein~KEGG: fre:Franean1_3816 tail sheath protein gene gene1460 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1424 Afer_1425 Afer_1425 Afer_1425 1490131 1490511 + putative resolvase KEGG: mbb:BCG_0973 putative resolvase gene gene1461 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1425 Afer_1426 Afer_1426 Afer_1426 1490508 1490753 + site-specific integrase-resolvase-like protein KEGG: blj:BLD_1224 putative site-specific integrase- resolvase gene gene1462 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1426 Afer_1427 Afer_1427 Afer_1427 1490770 1492458 + transposase%2C IS605 OrfB family TIGRFAM: transposase%2C IS605 OrfB family~KEGG: sma:SAV_5958 hypothetical protein gene gene1463 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1427 Afer_1428 Afer_1428 Afer_1428 1492877 1493941 + hypothetical protein KEGG: gw1.XVI.1206.1%3B . gene gene1464 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1428 Afer_1429 Afer_1429 Afer_1429 1493948 1494859 - phospholipid/glycerol acyltransferase PFAM: phospholipid/glycerol acyltransferase~SMART: phospholipid/glycerol acyltransferase~KEGG: fre:Franean1_4167 phospholipid/glycerol acyltransferase gene gene1465 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1429 Afer_1430 Afer_1430 Afer_1430 1494856 1496454 - conserved hypothetical protein KEGG: nca:Noca_2000 hypothetical protein gene gene1466 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1430 Afer_1431 Afer_1431 Afer_1431 1496455 1497657 - Alcohol dehydrogenase zinc-binding domain protein PFAM: Alcohol dehydrogenase zinc-binding domain protein%3B Alcohol dehydrogenase GroES domain protein~KEGG: fre:Franean1_4169 alcohol dehydrogenase gene gene1467 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1431 Afer_1432 Afer_1432 Afer_1432 1497654 1499966 - HAD-superfamily subfamily IB hydrolase%2C TIGR01490 TIGRFAM: HAD-superfamily subfamily IB hydrolase%2C TIGR01490~PFAM: Male sterility domain%3B Haloacid dehalogenase domain protein hydrolase%3B NAD-dependent epimerase/dehydratase~KEGG: fal:FRAAL3759 putative fatty acyl CoA reductase gene gene1468 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1432 Afer_1433 Afer_1433 Afer_1433 1500025 1500579 - hypothetical protein gene gene1469 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1433 Afer_1434 Afer_1434 Afer_1434 1500713 1502095 + General substrate transporter PFAM: General substrate transporter%3B major facilitator superfamily MFS_1~KEGG: mse:Msed_0866 general substrate transporter gene gene1470 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1434 Afer_1435 Afer_1435 Afer_1435 1502521 1503120 - ThiJ/PfpI domain protein PFAM: ThiJ/PfpI domain protein~KEGG: cjk:jk0046 putative ThiJ/PfpI family protein gene gene1471 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1435 Afer_1436 Afer_1436 Afer_1436 1503464 1504183 + hypothetical protein gene gene1472 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1436 Afer_1437 Afer_1437 Afer_1437 1504235 1505797 - drug resistance transporter%2C EmrB/QacA subfamily TIGRFAM: drug resistance transporter%2C EmrB/QacA subfamily~PFAM: major facilitator superfamily MFS_1~KEGG: fal:FRAAL2360 putative transmembrane efflux protein gene gene1473 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1437 Afer_1438 Afer_1438 Afer_1438 1505941 1506558 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: sco:SCO4167 TetR family transcriptional regulator gene gene1474 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1438 Afer_1439 Afer_1439 Afer_1439 1506512 1506889 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: mmi:MMAR_p13 transcriptional repressor protein%2C MerR gene gene1475 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1439 Afer_1440 Afer_1440 Afer_1440 1506886 1508095 - pseudogene gene1476 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1440 Afer_1441 Afer_1441 Afer_1441 1508166 1508873 - CobB/CobQ domain protein glutamine amidotransferase PFAM: CobB/CobQ domain protein glutamine amidotransferase~KEGG: nfa:nfa3010 putative cobyric acid synthase gene gene1477 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1441 Afer_1442 Afer_1442 Afer_1442 1508870 1510096 - domain of unknown function DUF1727 PFAM: domain of unknown function DUF1727%3B Mur ligase middle domain protein~KEGG: mjl:Mjls_5269 hypothetical protein gene gene1478 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1442 Afer_1443 Afer_1443 Afer_1443 1510408 1511352 + transcriptional regulator%2C LysR family PFAM: LysR substrate-binding%3B regulatory protein LysR~KEGG: fal:FRAAL4491 oxidative stress transcriptional regulator gene gene1479 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1443 Afer_1444 Afer_1444 Afer_1444 1511491 1512420 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: nca:Noca_4120 short-chain dehydrogenase/reductase SDR gene gene1480 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1444 Afer_1445 Afer_1445 Afer_1445 1512454 1513101 + phosphate uptake regulator%2C PhoU PFAM: PhoU family protein~KEGG: sco:SCO4228 phosphate transport system regulator gene gene1481 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1445 Afer_1446 Afer_1446 Afer_1446 1513109 1513780 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Sigma-70 region 4 type 2~SMART: response regulator receiver%3B regulatory protein LuxR~KEGG: sgr:SGR_3764 putative two-component system response regulator gene gene1482 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1446 Afer_1447 Afer_1447 Afer_1447 1513836 1514279 - UspA domain protein PFAM: UspA domain protein~KEGG: saq:Sare_1532 UspA domain-containing protein gene gene1483 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1447 Afer_1448 Afer_1448 Afer_1448 1514384 1515664 + major facilitator transporter KEGG: fre:Franean1_0153 major facilitator transporter gene gene1484 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1448 Afer_1449 Afer_1449 Afer_1449 1515721 1516893 + hypothetical protein KEGG: afw:Anae109_1816 hypothetical protein gene gene1485 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1449 Afer_1450 Afer_1450 Afer_1450 1517617 1519905 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase%3B 4Fe-4S ferredoxin iron-sulfur binding domain protein~KEGG: dsy:DSY3404 hypothetical protein gene gene1486 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1450 Afer_1451 Afer_1451 Afer_1451 1519917 1521467 - cyclic nucleotide-binding protein KEGG: mse:Msed_0469 hypothetical protein gene gene1487 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1451 Afer_1452 Afer_1452 Afer_1452 1521568 1522389 + transcriptional regulator%2C BadM/Rrf2 family TIGRFAM: transcriptional regulator%2C Rrf2 family~PFAM: protein of unknown function UPF0074~KEGG: glo:Glov_1241 transcriptional regulator%2C BadM/Rrf2 family gene gene1488 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1452 Afer_1453 Afer_1453 Afer_1453 1522334 1522789 - ferric uptake regulator%2C Fur family PFAM: ferric-uptake regulator~KEGG: cts:Ctha_1302 ferric uptake regulator%2C Fur family gene gene1489 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1453 Afer_1454 Afer_1454 Afer_1454 1522782 1523720 - conserved hypothetical protein KEGG: hya:HY04AAS1_0184 hypothetical protein gene gene1490 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1454 Afer_1455 Afer_1455 Afer_1455 1523920 1524888 + aldo/keto reductase PFAM: aldo/keto reductase~KEGG: bac:BamMC406_2130 aldo/keto reductase gene gene1491 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1455 Afer_1456 Afer_1456 Afer_1456 1524999 1525724 + hypothetical protein KEGG: bpa:BPP4333 putative integral membrane protein gene gene1492 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1456 Afer_1457 Afer_1457 Afer_1457 1525748 1526494 + Methyltransferase type 12 PFAM: Methyltransferase type 12%3B Methyltransferase type 11~KEGG: sco:SCO3340 hypothetical protein gene gene1493 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1457 Afer_1458 Afer_1458 Afer_1458 1526496 1527896 + Amidase PFAM: Amidase~KEGG: sen:SACE_2834 secreted amidase gene gene1494 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1458 Afer_1459 Afer_1459 Afer_1459 1527893 1528360 + conserved hypothetical protein KEGG: stp:Strop_0704 hypothetical protein gene gene1495 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1459 Afer_1460 Afer_1460 Afer_1460 1528357 1530657 + DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein~SMART: DEAD-like helicases %3B helicase domain protein~KEGG: dau:Daud_0816 DEAD/DEAH box helicase domain- containing protein gene gene1496 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1460 Afer_1461 Afer_1461 Afer_1461 1530654 1531304 - endonuclease III KEGG: cya:CYA_0912 endonuclease III~TIGRFAM: endonuclease III~PFAM: HhH-GPD family protein%3B helix-hairpin-helix motif~SMART: HhH-GPD family protein gene gene1497 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1461 Afer_1462 Afer_1462 Afer_1462 1531335 1532267 + mycothiol biosynthesis acetyltransferase TIGRFAM: mycothiol biosynthesis acetyltransferase~PFAM: GCN5-related N-acetyltransferase~KEGG: ace:Acel_2026 GCN5-related N- acetyltransferase gene gene1498 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1462 Afer_1463 Afer_1463 Afer_1463 1532289 1533347 + aminotransferase class V PFAM: aminotransferase class V~KEGG: stp:Strop_1799 aminotransferase%2C class V gene gene1499 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1463 Afer_1464 Afer_1464 Afer_1464 1534011 1534190 - hypothetical protein gene gene1500 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1464 Afer_1465 Afer_1465 Afer_1465 1534201 1534602 - hypothetical protein KEGG: sgl:SG1539 hemin ABC transporter permease component gene gene1501 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1465 Afer_1466 Afer_1466 Afer_1466 1534563 1535081 - major facilitator superfamily protein KEGG: bcj:BCAM0375 major facilitator superfamily protein gene gene1502 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1466 Afer_1467 Afer_1467 Afer_1467 1535224 1536651 + Exonuclease RNase T and DNA polymerase III PFAM: Exonuclease RNase T and DNA polymerase III%3B Excinuclease ABC C subunit domain protein%3B UvrB/UvrC protein~SMART: Exonuclease%3B Excinuclease ABC C subunit domain protein~KEGG: ace:Acel_0968 hypothetical protein gene gene1503 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1467 Afer_1468 Afer_1468 Afer_1468 1536601 1537665 - anthranilate phosphoribosyltransferase KEGG: hmo:HM1_1918 anthranilate phosphoribosyltransferase~TIGRFAM: anthranilate phosphoribosyltransferase~PFAM: glycosyl transferase family 3%3B Glycosyl transferase%2C family 3-like gene gene1504 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1468 Afer_1469 Afer_1469 Afer_1469 1537652 1540072 - diguanylate cyclase/phosphodiesterase KEGG: eba:ebA6041 signal transducer protein~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~SMART: EAL domain protein%3B GGDEF domain containing protein gene gene1505 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1469 Afer_1470 Afer_1470 Afer_1470 1540170 1542065 + diguanylate cyclase KEGG: cti:RALTA_B0100 putative diguanylate cyclase (GGDEAF) and C-di-GMP phosphodiesterase (EAL domain) with CHASE and PAS domains~TIGRFAM: diguanylate cyclase~PFAM: GGDEF domain containing protein~SMART: GGDEF domain containing protein gene gene1506 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1470 Afer_1471 Afer_1471 Afer_1471 1542049 1543254 - acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: sth:STH1253 acyl-CoA dehydrogenase%2C short- chain specific gene gene1507 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1471 Afer_1472 Afer_1472 Afer_1472 1543397 1544803 + Glycerol kinase PFAM: carbohydrate kinase FGGY~KEGG: rsq:Rsph17025_1200 glycerol kinase gene gene1508 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1472 Afer_1473 Afer_1473 Afer_1473 1544821 1545804 - 4Fe-4S ferredoxin iron-sulfur binding domain- containing protein KEGG: sus:Acid_7587 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein gene gene1509 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1473 Afer_1474 Afer_1474 Afer_1474 1545903 1546994 + Phosphoribosylaminoimidazole carboxylase PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp~KEGG: cms:CMS_0622 phosphoribosylaminoimidazole carboxylase ATPase subunit PurK gene gene1510 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1474 Afer_1475 Afer_1475 Afer_1475 1546991 1547482 + phosphoribosylaminoimidazole carboxylase%2C catalytic subunit KEGG: mva:Mvan_1714 phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~TIGRFAM: phosphoribosylaminoimidazole carboxylase%2C catalytic subunit~PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase gene gene1511 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1475 Afer_1476 Afer_1476 Afer_1476 1547451 1548200 + hypothetical protein KEGG: saq:Sare_3286 hypothetical protein gene gene1512 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1476 Afer_1477 Afer_1477 Afer_1477 1548704 1550230 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: mva:Mvan_4071 transposase%2C IS4 family protein gene gene1513 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1477 Afer_1478 Afer_1478 Afer_1478 1550436 1550789 - carbon storage regulator%2C CsrA PFAM: carbon storage regulator~KEGG: lxx:Lxx06470 carbon storage regulator CsrA gene gene1514 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1478 Afer_1479 Afer_1479 Afer_1479 1550789 1551061 - hypothetical protein gene gene1515 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1479 Afer_1480 Afer_1480 Afer_1480 1551179 1552132 - hypothetical protein gene gene1516 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1480 Afer_1481 Afer_1481 Afer_1481 1552322 1553242 - hypothetical protein gene gene1517 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1481 Afer_1482 Afer_1482 Afer_1482 1553258 1554154 - hypothetical protein gene gene1518 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1482 Afer_1483 Afer_1483 Afer_1483 1554151 1554957 - hypothetical protein gene gene1519 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1483 Afer_1484 Afer_1484 Afer_1484 1554962 1555657 - hypothetical protein KEGG: cms:CMS_pCSL0080 hypothetical protein gene gene1520 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1484 Afer_1485 Afer_1485 Afer_1485 1555746 1556066 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene1521 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1485 Afer_1486 Afer_1486 Afer_1486 1556066 1556935 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_5060 integrase catalytic subunit gene gene1522 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1486 Afer_1487 Afer_1487 Afer_1487 1557180 1558706 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: mva:Mvan_4071 transposase%2C IS4 family protein gene gene1523 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1487 Afer_1488 Afer_1488 Afer_1488 1559146 1559853 - Zn-ribbon protein possibly nucleic acid-binding KEGG: mva:Mvan_3619 hypothetical protein gene gene1525 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1488 Afer_1489 Afer_1489 Afer_1489 1560010 1560477 - RDD domain containing protein PFAM: RDD domain containing protein~KEGG: pca:Pcar_2416 hypothetical protein gene gene1526 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1489 Afer_1490 Afer_1490 Afer_1490 1560606 1561853 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: fal:FRAAL2900 major facilitator superfamily permease gene gene1527 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1490 Afer_1491 Afer_1491 Afer_1491 1561927 1562436 + Inorganic diphosphatase PFAM: Inorganic pyrophosphatase~KEGG: msm:MSMEG_6114 inorganic pyrophosphatase gene gene1528 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1491 Afer_1492 Afer_1492 Afer_1492 1562501 1562830 + nitrogen-fixing NifU domain protein PFAM: nitrogen-fixing NifU domain protein~KEGG: sat:SYN_02452 NifU-like domain-containing protein gene gene1529 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1492 Afer_1493 Afer_1493 Afer_1493 1562832 1563566 + Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: sma:SAV_3829 enoyl-CoA hydratase gene gene1530 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1493 Afer_1494 Afer_1494 Afer_1494 1563557 1563802 + conserved hypothetical protein KEGG: mva:Mvan_4307 hypothetical protein gene gene1531 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1494 Afer_1495 Afer_1495 Afer_1495 1563814 1564899 - Cys/Met metabolism pyridoxal-phosphate-dependent protein PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein~KEGG: kra:Krad_1362 Cys/Met metabolism pyridoxal- phosphate-dependent protein gene gene1532 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1495 Afer_1496 Afer_1496 Afer_1496 1564923 1565219 - conserved hypothetical protein KEGG: kra:Krad_1406 hypothetical protein gene gene1533 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1496 Afer_1497 Afer_1497 Afer_1497 1565244 1565585 - ribosomal protein L19 TIGRFAM: ribosomal protein L19~PFAM: ribosomal protein L19~KEGG: sen:SACE_6049 50S ribosomal protein L19 gene gene1534 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1497 Afer_1498 Afer_1498 Afer_1498 1565582 1566349 - tRNA (guanine-N1)-methyltransferase KEGG: gka:GK1201 tRNA (guanine-N(1)-)- methyltransferase (M1G-methyltransferase)~TIGRFAM: tRNA (guanine-N1)-methyltransferase~PFAM: tRNA (guanine-N1-)-methyltransferase gene gene1535 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1498 Afer_1499 Afer_1499 Afer_1499 1566358 1566828 - 16S rRNA processing protein RimM TIGRFAM: 16S rRNA processing protein RimM~PFAM: RimM protein~KEGG: sth:STH1469 16S rRNA processing protein gene gene1536 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1499 Afer_1500 Afer_1500 Afer_1500 1566825 1567199 - hypothetical protein KEGG: nca:Noca_3259 hypothetical protein gene gene1537 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1500 Afer_1501 Afer_1501 Afer_1501 1567199 1567450 - ribosomal protein S16 TIGRFAM: ribosomal protein S16~PFAM: ribosomal protein S16~KEGG: nth:Nther_1369 SSU ribosomal protein S16P gene gene1538 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1501 Afer_1502 Afer_1502 Afer_1502 1567527 1568858 - signal recognition particle protein KEGG: sth:STH1465 signal recognition particle~TIGRFAM: signal recognition particle protein~PFAM: GTP-binding signal recognition particle SRP54 G- domain%3B Signal peptide binding (SRP54) M- domain protein%3B GTP-binding signal recognition particle SRP54 helical bundle~SMART: AAA ATPase gene gene1539 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1502 Afer_1503 Afer_1503 Afer_1503 1568851 1569954 - signal recognition particle-docking protein FtsY KEGG: mav:MAV_3776 signal recognition particle- docking protein FtsY~TIGRFAM: signal recognition particle-docking protein FtsY~PFAM: GTP-binding signal recognition particle SRP54 G- domain~SMART: AAA ATPase gene gene1540 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1503 Afer_1504 Afer_1504 Afer_1504 1570332 1570574 - hypothetical protein KEGG: hypothetical protein LOC100148517 gene gene1541 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1504 Afer_1505 Afer_1505 Afer_1505 1570853 1571410 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: Sigma-70 region 4 type 2%3B sigma-70 region 2 domain protein%3B sigma-70 region 4 domain protein~KEGG: sco:SCO4866 ECF sigma factor gene gene1542 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1505 Afer_1506 Afer_1506 Afer_1506 1571407 1572258 + hypothetical protein KEGG: YALI0C15532p gene gene1543 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1506 Afer_1507 Afer_1507 Afer_1507 1572307 1575654 - SMC domain protein PFAM: SMC domain protein~KEGG: sen:SACE_6071 chromosome segregation ATPase gene gene1544 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1507 Afer_1508 Afer_1508 Afer_1508 1575655 1576482 - formamidopyrimidine-DNA glycosylase KEGG: sen:SACE_6099 formamidopyrimidine-DNA glycosylase~TIGRFAM: formamidopyrimidine-DNA glycosylase~PFAM: DNA glycosylase/AP lyase%2C H2TH DNA-binding%3B Formamidopyrimidine-DNA glycosylase catalytic domain protein%3B zinc finger Fpg domain protein gene gene1545 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1508 Afer_1509 Afer_1509 Afer_1509 1576466 1577257 - ribonuclease III KEGG: bba:Bd1941 ribonuclease III~TIGRFAM: ribonuclease III~PFAM: ribonuclease III%3B double-stranded RNA binding domain protein~SMART: ribonuclease III%3B double-stranded RNA binding domain protein gene gene1546 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1509 Afer_1510 Afer_1510 Afer_1510 1577254 1577538 - phosphopantetheine-binding PFAM: phosphopantetheine-binding~KEGG: csc:Csac_1606 acyl carrier protein gene gene1547 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1510 Afer_1511 Afer_1511 Afer_1511 1577531 1578511 - fatty acid/phospholipid synthesis protein PlsX TIGRFAM: fatty acid/phospholipid synthesis protein PlsX~PFAM: fatty acid synthesis plsX protein~KEGG: emi:Emin_0658 fatty acid/phospholipid synthesis protein PlsX gene gene1548 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1511 Afer_1512 Afer_1512 Afer_1512 1578742 1579263 - protein of unknown function DUF177 PFAM: protein of unknown function DUF177~KEGG: nca:Noca_3282 hypothetical protein gene gene1549 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1512 Afer_1513 Afer_1513 Afer_1513 1579256 1579789 - hypothetical protein KEGG: ace:Acel_1577 hypothetical protein gene gene1550 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1513 Afer_1514 Afer_1514 Afer_1514 1579786 1580271 - pantetheine-phosphate adenylyltransferase KEGG: gvi:glr0847 pantetheine-phosphate adenylyltransferase~TIGRFAM: pantetheine-phosphate adenylyltransferase%3B cytidyltransferase-related domain protein~PFAM: cytidylyltransferase gene gene1551 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1514 Afer_1515 Afer_1515 Afer_1515 1580313 1580846 - methyltransferase TIGRFAM: methyltransferase~PFAM: Protein of unknown function methylase putative~KEGG: aeh:Mlg_2656 putative methyltransferase gene gene1552 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1515 Afer_1516 Afer_1516 Afer_1516 1580849 1583011 - DEAD/DEAH box helicase domain protein PFAM: DEAD/DEAH box helicase domain protein%3B helicase domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type~SMART: DEAD-like helicases %3B helicase domain protein~KEGG: rca:Rcas_0601 ATP-dependent DNA helicase RecG gene gene1553 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1516 Afer_1517 Afer_1517 Afer_1517 1583008 1584627 - Dak phosphatase PFAM: Dak phosphatase~KEGG: nca:Noca_3286 Dak phosphatase gene gene1554 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1517 Afer_1518 Afer_1518 Afer_1518 1584701 1584889 + ribosomal protein L28 TIGRFAM: ribosomal protein L28~PFAM: ribosomal protein L28~KEGG: fre:Franean1_1131 50S ribosomal protein L28 gene gene1555 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1518 Afer_1519 Afer_1519 Afer_1519 1584895 1585911 + Ferrochelatase PFAM: ferrochelatase~KEGG: nfa:nfa34750 ferrochelatase gene gene1556 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1519 Afer_1520 Afer_1520 Afer_1520 1586019 1587851 + extracellular solute-binding protein family 5 PFAM: extracellular solute-binding protein family 5~KEGG: saq:Sare_4778 extracellular solute-binding protein gene gene1557 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1520 Afer_1521 Afer_1521 Afer_1521 1587848 1589260 - glucose-6-phosphate 1-dehydrogenase KEGG: mbo:Mb1152 glucose-6-phosphate 1- dehydrogenase~TIGRFAM: glucose-6-phosphate 1-dehydrogenase~PFAM: glucose-6-phosphate dehydrogenase gene gene1558 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1521 Afer_1522 Afer_1522 Afer_1522 1589236 1590117 - Aldose 1-epimerase PFAM: Aldose 1-epimerase~KEGG: saq:Sare_0514 aldose 1-epimerase gene gene1559 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1522 Afer_1523 Afer_1523 Afer_1523 1590852 1592462 - cytochrome b/b6 domain protein PFAM: Cytochrome b/b6 domain~KEGG: ace:Acel_1781 hypothetical protein gene gene1561 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1523 Afer_1524 Afer_1524 Afer_1524 1592459 1592635 - conserved hypothetical protein KEGG: ace:Acel_1781 hypothetical protein gene gene1562 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1524 Afer_1525 Afer_1525 Afer_1525 1592754 1596257 - diguanylate cyclase/phosphodiesterase KEGG: ajs:Ajs_2017 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)~TIGRFAM: diguanylate cyclase~PFAM: EAL domain protein%3B GGDEF domain containing protein~SMART: GGDEF domain containing protein%3B EAL domain protein gene gene1563 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1525 Afer_1526 Afer_1526 Afer_1526 1596404 1597618 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: stp:Strop_0934 acyl-CoA dehydrogenase domain- containing protein gene gene1564 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1526 Afer_1527 Afer_1527 Afer_1527 1597615 1598499 + 3-hydroxybutyryl-CoA dehydrogenase PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding%3B 3-hydroxyacyl-CoA dehydrogenase domain protein~KEGG: nca:Noca_4392 3-hydroxybutyryl-CoA dehydrogenase gene gene1565 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1527 Afer_1528 Afer_1528 Afer_1528 1598539 1599945 + glutamyl-tRNA synthetase TIGRFAM: glutamyl-tRNA synthetase~PFAM: glutamyl-tRNA synthetase class Ic~KEGG: fra:Francci3_3219 glutamyl-tRNA synthetase gene gene1566 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1528 Afer_1529 Afer_1529 Afer_1529 1600431 1601981 - 2-isopropylmalate synthase TIGRFAM: 2-isopropylmalate synthase~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerization) domain~KEGG: rxy:Rxyl_3129 2-isopropylmalate synthase gene gene1568 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1529 Afer_1530 Afer_1530 Afer_1530 1602182 1603765 - D-3-phosphoglycerate dehydrogenase TIGRFAM: D-3-phosphoglycerate dehydrogenase~PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding%3B D-isomer specific 2-hydroxyacid dehydrogenase catalytic region%3B amino acid-binding ACT domain protein~KEGG: fal:FRAAL5848 D-3-phosphoglycerate dehydrogenase gene gene1569 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1530 Afer_1531 Afer_1531 Afer_1531 1603792 1604988 - aminotransferase class I and II PFAM: aminotransferase class I and II~KEGG: rsa:RSal33209_0984 aspartate aminotransferase gene gene1570 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1531 Afer_1532 Afer_1532 Afer_1532 1605110 1606258 + phosphoserine aminotransferase TIGRFAM: phosphoserine aminotransferase~PFAM: aminotransferase class V~KEGG: nca:Noca_0730 phosphoserine aminotransferase gene gene1571 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1532 Afer_1533 Afer_1533 Afer_1533 1606268 1606876 - 3-isopropylmalate dehydratase%2C small subunit KEGG: fre:Franean1_1114 isopropylmalate isomerase small subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C small subunit~PFAM: aconitate hydratase domain protein gene gene1572 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1533 Afer_1534 Afer_1534 Afer_1534 1606879 1608285 - 3-isopropylmalate dehydratase%2C large subunit KEGG: ace:Acel_1591 isopropylmalate isomerase large subunit~TIGRFAM: 3-isopropylmalate dehydratase%2C large subunit~PFAM: aconitate hydratase domain protein gene gene1573 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1534 Afer_1535 Afer_1535 Afer_1535 1608313 1608795 - GreA/GreB family elongation factor PFAM: transcription elongation factor GreA/GreB domain protein~KEGG: fra:Francci3_3904 GreA/GreB family elongation factor gene gene1574 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1535 Afer_1536 Afer_1536 Afer_1536 1608970 1609998 + 3-isopropylmalate dehydrogenase PFAM: isocitrate/isopropylmalate dehydrogenase~KEGG: nca:Noca_3368 3-isopropylmalate dehydrogenase gene gene1575 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1536 Afer_1537 Afer_1537 Afer_1537 1609985 1610911 + branched-chain amino acid aminotransferase TIGRFAM: branched-chain amino acid aminotransferase~PFAM: aminotransferase class IV~KEGG: fre:Franean1_1099 branched-chain amino acid aminotransferase gene gene1576 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1537 Afer_1538 Afer_1538 Afer_1538 1610918 1612510 + 2-isopropylmalate synthase/homocitrate synthase family protein TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein~PFAM: pyruvate carboxyltransferase%3B LeuA allosteric (dimerization) domain~KEGG: tfu:Tfu_0617 alpha- isopropylmalate/homocitrate synthase family transferase gene gene1577 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1538 Afer_1539 Afer_1539 Afer_1539 1612524 1612985 + hypothetical protein gene gene1578 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1539 Afer_1540 Afer_1540 Afer_1540 1612982 1613539 - hypothetical protein gene gene1579 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1540 Afer_1541 Afer_1541 Afer_1541 1619241 1619794 + pseudogene gene1584 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1541 Afer_1542 Afer_1542 Afer_1542 1620173 1621471 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: pac:PPA0152 putative NADH dehydrogenase gene gene1585 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1542 Afer_1543 Afer_1543 Afer_1543 1621508 1622149 - hypothetical protein KEGG: scl:sce8592 hypothetical protein gene gene1586 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1543 Afer_1544 Afer_1544 Afer_1544 1622133 1623368 - hypothetical protein KEGG: cmi:CMM_1462 hypothetical protein gene gene1587 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1544 Afer_1545 Afer_1545 Afer_1545 1623365 1624387 - ketol-acid reductoisomerase KEGG: ava:Ava_0133 ketol-acid reductoisomerase~TIGRFAM: ketol-acid reductoisomerase~PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein%3B acetohydroxy acid isomeroreductase gene gene1588 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1545 Afer_1546 Afer_1546 Afer_1546 1624391 1624963 - acetolactate synthase%2C small subunit TIGRFAM: acetolactate synthase%2C small subunit~PFAM: amino acid-binding ACT domain protein~KEGG: ace:Acel_0707 acetolactate synthase 3 regulatory subunit gene gene1589 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1546 Afer_1547 Afer_1547 Afer_1547 1624960 1626669 - acetolactate synthase%2C large subunit%2C biosynthetic type TIGRFAM: acetolactate synthase%2C large subunit%2C biosynthetic type~PFAM: thiamine pyrophosphate protein TPP binding domain protein%3B thiamine pyrophosphate protein central region%3B thiamine pyrophosphate protein domain protein TPP- binding~KEGG: kra:Krad_1335 acetolactate synthase 1 catalytic subunit gene gene1590 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1547 Afer_1548 Afer_1548 Afer_1548 1626838 1628541 - dihydroxy-acid dehydratase KEGG: nfa:nfa11740 dihydroxy-acid dehydratase~TIGRFAM: dihydroxy-acid dehydratase~PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase gene gene1591 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1548 Afer_1549 Afer_1549 Afer_1549 1628621 1630072 - glutamyl-tRNA(Gln) amidotransferase%2C B subunit TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C B subunit~PFAM: GatB region%3B GatB/Yqey domain protein%3B GatB central domain protein~KEGG: pth:PTH_2521 aspartyl/glutamyl-tRNA amidotransferase subunit B gene gene1592 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1549 Afer_1550 Afer_1550 Afer_1550 1630069 1631508 - glutamyl-tRNA(Gln) amidotransferase%2C A subunit KEGG: fre:Franean1_1085 aspartyl/glutamyl-tRNA amidotransferase subunit A~TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C A subunit~PFAM: Amidase gene gene1593 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1550 Afer_1551 Afer_1551 Afer_1551 1631505 1631807 - glutamyl-tRNA(Gln) amidotransferase%2C C subunit TIGRFAM: glutamyl-tRNA(Gln) amidotransferase%2C C subunit~KEGG: dps:DP0644 Glu-tRNA(Gln) amidotransferase%2C subunit C gene gene1594 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1551 Afer_1552 Afer_1552 Afer_1552 1631840 1632277 - hypothetical protein KEGG: prw:PsycPRwf_1743 hypothetical protein gene gene1595 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1552 Afer_1553 Afer_1553 Afer_1553 1632312 1634204 - serine/threonine protein kinase with PASTA sensor(s) PFAM: Serine/threonine protein kinase-related%3B tyrosine protein kinase%3B PASTA domain containing protein~SMART: serine/threonine protein kinase%3B tyrosine protein kinase%3B PASTA domain containing protein~KEGG: ace:Acel_0986 serine/threonine protein kinase gene gene1596 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1553 Afer_1554 Afer_1554 Afer_1554 1634259 1636253 - DNA ligase%2C NAD-dependent KEGG: cau:Caur_0241 DNA ligase%2C NAD-dependent~TIGRFAM: DNA ligase%2C NAD-dependent~PFAM: NAD-dependent DNA ligase adenylation%3B BRCT domain protein%3B helix-hairpin-helix motif%3B zinc-finger NAD- dependent DNA ligase C4-type%3B NAD-dependent DNA ligase OB- fold~SMART: NAD-dependent DNA ligase %3B BRCT domain protein%3B Helix-hairpin-helix DNA-binding class 1 gene gene1597 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1554 Afer_1555 Afer_1555 Afer_1555 1636246 1637271 - tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase%3B ExsB family protein~KEGG: scl:sce7297 tRNA (5-methylaminomethyl-2- thiouridylate)-methyltransferase gene gene1598 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1555 Afer_1556 Afer_1556 Afer_1556 1637298 1638056 - glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: ade:Adeh_3985 glycerophosphoryl diester phosphodiesterase gene gene1599 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1556 Afer_1557 Afer_1557 Afer_1557 1638094 1638687 + hypothetical protein gene gene1600 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1557 Afer_1558 Afer_1558 Afer_1558 1638749 1639558 + prolipoprotein diacylglyceryl transferase PFAM: prolipoprotein diacylglyceryl transferase~KEGG: rxy:Rxyl_1139 prolipoprotein diacylglyceryl transferase gene gene1601 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1558 Afer_1559 Afer_1559 Afer_1559 1639555 1640886 + nicotinate phosphoribosyltransferase TIGRFAM: nicotinate phosphoribosyltransferase~PFAM: Nicotinate phosphoribosyltransferase-like~KEGG: ace:Acel_1692 nicotinate phosphoribosyltransferase gene gene1602 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1559 Afer_1560 Afer_1560 Afer_1560 1640896 1642134 + beta-lactamase PFAM: beta-lactamase~KEGG: sen:SACE_2212 beta-lactamase gene gene1603 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1560 Afer_1561 Afer_1561 Afer_1561 1642187 1642567 - thioredoxin TIGRFAM: thioredoxin~PFAM: Thioredoxin domain~KEGG: tfu:Tfu_0172 thioredoxin gene gene1604 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1561 Afer_1562 Afer_1562 Afer_1562 1642754 1643212 - protein of unknown function DUF501 PFAM: protein of unknown function DUF501~KEGG: rxy:Rxyl_0915 hypothetical protein gene gene1606 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1562 Afer_1563 Afer_1563 Afer_1563 1643202 1643906 - carbon monoxide dehydrogenase subunit G PFAM: carbon monoxide dehydrogenase subunit G%3B Activator of Hsp90 ATPase 1 family protein~KEGG: fre:Franean1_3210 carbon monoxide dehydrogenase subunit G gene gene1607 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1563 Afer_1564 Afer_1564 Afer_1564 1643909 1644502 - 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase KEGG: rxy:Rxyl_0118 4-diphosphocytidyl-2C-methyl-D- erythritol synthase gene gene1608 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1564 Afer_1565 Afer_1565 Afer_1565 1644499 1645707 - protein of unknown function DUF182 PFAM: protein of unknown function DUF182~KEGG: sgr:SGR_1805 putative xanthine dehydrogenase gene gene1609 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1565 Afer_1566 Afer_1566 Afer_1566 1645700 1646794 - VWA containing CoxE family protein PFAM: VWA containing CoxE family protein~SMART: von Willebrand factor type A~KEGG: rha:RHA1_ro04978 hypothetical protein gene gene1610 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1566 Afer_1567 Afer_1567 Afer_1567 1646778 1647746 - ATPase associated with various cellular activities AAA_5 PFAM: ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase~KEGG: rha:RHA1_ro04979 MoxR family ATPase gene gene1611 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1567 Afer_1568 Afer_1568 Afer_1568 1647733 1648542 - molybdopterin dehydrogenase FAD-binding PFAM: molybdopterin dehydrogenase FAD-binding%3B CO dehydrogenase flavoprotein domain protein~KEGG: sen:SACE_1160 carbon monoxide dehydrogenase%2C medium chain gene gene1612 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1568 Afer_1569 Afer_1569 Afer_1569 1648555 1650942 - Carbon-monoxide dehydrogenase (acceptor) PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding%3B aldehyde oxidase and xanthine dehydrogenase a/b hammerhead~KEGG: rxy:Rxyl_0112 xanthine dehydrogenase%2C molybdenum binding subunit apoprotein gene gene1613 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1569 Afer_1570 Afer_1570 Afer_1570 1650939 1651412 - (2Fe-2S)-binding domain protein PFAM: [2Fe-2S]-binding domain protein%3B ferredoxin~KEGG: sen:SACE_1161 putative carbon monoxide dehydrogenase small chain gene gene1614 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1570 Afer_1571 Afer_1571 Afer_1571 1651662 1652141 + protein of unknown function DUF107 PFAM: protein of unknown function DUF107~KEGG: cpc:Cpar_0823 protein of unknown function DUF107 gene gene1615 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1571 Afer_1572 Afer_1572 Afer_1572 1652155 1653078 + band 7 protein PFAM: band 7 protein~SMART: band 7 protein~KEGG: tpe:Tpen_0832 band 7 protein gene gene1616 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1572 Afer_1573 Afer_1573 Afer_1573 1653735 1655069 - inner-membrane translocator PFAM: inner-membrane translocator~KEGG: saq:Sare_4238 monosaccharide-transporting ATPase gene gene1617 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1573 Afer_1574 Afer_1574 Afer_1574 1655069 1655854 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: mva:Mvan_5292 ABC transporter-related protein gene gene1618 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1574 Afer_1575 Afer_1575 Afer_1575 1655929 1657143 - solute-binding protein KEGG: ace:Acel_1132 solute-binding protein gene gene1619 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1575 Afer_1576 Afer_1576 Afer_1576 1657259 1657951 - two component transcriptional regulator%2C winged helix family PFAM: response regulator receiver%3B transcriptional regulator domain protein~SMART: response regulator receiver~KEGG: hau:Haur_2262 two component transcriptional regulator gene gene1620 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1576 Afer_1577 Afer_1577 Afer_1577 1657948 1660200 - histidine kinase PFAM: ABC transporter related%3B ATP-binding region ATPase domain protein%3B histidine kinase A domain protein~SMART: ATP-binding region ATPase domain protein%3B histidine kinase A domain protein%3B AAA ATPase~KEGG: sgr:SGR_1497 putative ABC transporter ATP- binding protein gene gene1621 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1577 Afer_1578 Afer_1578 Afer_1578 1660234 1662495 + hypothetical protein KEGG: ade:Adeh_2512 UvrD/REP helicase gene gene1622 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1578 Afer_1579 Afer_1579 Afer_1579 1662495 1665464 + UvrD/REP helicase PFAM: UvrD/REP helicase~KEGG: syf:Synpcc7942_1157 hypothetical protein gene gene1623 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1579 Afer_1580 Afer_1580 Afer_1580 1665474 1666040 + hypothetical protein gene gene1624 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1580 Afer_1581 Afer_1581 Afer_1581 1666076 1666636 + RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: sma:SAV_6582 RNA polymerase sigma factor SigK gene gene1625 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1581 Afer_1582 Afer_1582 Afer_1582 1666636 1667370 + conserved hypothetical protein KEGG: fal:FRAAL3631 hypothetical protein gene gene1626 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1582 Afer_1583 Afer_1583 Afer_1583 1667476 1667937 - hypothetical protein gene gene1627 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1583 Afer_1584 Afer_1584 Afer_1584 1668068 1668790 - glycerophosphoryl diester phosphodiesterase PFAM: glycerophosphoryl diester phosphodiesterase~KEGG: ttj:TTHB141 putative glycerophosphoryl diester phosphodiesterase gene gene1628 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1584 Afer_1585 Afer_1585 Afer_1585 1669078 1671366 - Carbon-monoxide dehydrogenase (acceptor) PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding%3B aldehyde oxidase and xanthine dehydrogenase a/b hammerhead~KEGG: sen:SACE_5140 carbon monoxide dehydrogenase large chain gene gene1629 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1585 Afer_1586 Afer_1586 Afer_1586 1671575 1672048 - hypothetical protein KEGG: mva:Mvan_5241 FHA domain-containing protein gene gene1630 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1586 Afer_1587 Afer_1587 Afer_1587 1672085 1672849 - protein of unknown function DUF124 PFAM: protein of unknown function DUF124~KEGG: azc:AZC_0415 hypothetical protein gene gene1631 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1587 Afer_1588 Afer_1588 Afer_1588 1672925 1673281 - hypothetical protein gene gene1632 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1588 Afer_1589 Afer_1589 Afer_1589 1673278 1674567 - enolase KEGG: dar:Daro_2364 phosphopyruvate hydratase~TIGRFAM: enolase~PFAM: enolase gene gene1633 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1589 Afer_1590 Afer_1590 Afer_1590 1674596 1675888 - MazG nucleotide pyrophosphohydrolase PFAM: MazG nucleotide pyrophosphohydrolase~KEGG: gvi:gll2594 tetrapyrrole methylase family protein / MazG family protein gene gene1634 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1590 Afer_1591 Afer_1591 Afer_1591 1676008 1676511 - hypothetical protein KEGG: predicted protein gene gene1635 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1591 Afer_1592 Afer_1592 Afer_1592 1676731 1676859 - hypothetical protein gene gene1636 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1592 Afer_1593 Afer_1593 Afer_1593 1677075 1678088 - PpiC-type peptidyl-prolyl cis-trans isomerase PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase~KEGG: dra:DR_1063 peptidyl-prolyl cis-trans isomerase C gene gene1637 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1593 Afer_1594 Afer_1594 Afer_1594 1678116 1681511 - transcription-repair coupling factor KEGG: fal:FRAAL6237 transcription-repair coupling factor~TIGRFAM: transcription-repair coupling factor~PFAM: DEAD/DEAH box helicase domain protein%3B transcription factor CarD%3B TRCF domain protein%3B helicase domain protein~SMART: DEAD-like helicases %3B helicase domain protein gene gene1638 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1594 Afer_1595 Afer_1595 Afer_1595 1681489 1682067 - peptidyl-tRNA hydrolase KEGG: mmi:MMAR_4473 peptidyl-tRNA hydrolase Pth~TIGRFAM: peptidyl-tRNA hydrolase~PFAM: peptidyl-tRNA hydrolase gene gene1639 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1595 Afer_1596 Afer_1596 Afer_1596 1682096 1682614 - ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5~PFAM: ribosomal protein L25~KEGG: tbd:Tbd_0388 50S ribosomal protein L25/general stress protein Ctc gene gene1640 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1596 Afer_1597 Afer_1597 Afer_1597 1682698 1683669 - ribose-phosphate pyrophosphokinase KEGG: ace:Acel_1946 ribose-phosphate pyrophosphokinase~TIGRFAM: ribose-phosphate pyrophosphokinase~PFAM: phosphoribosyltransferase gene gene1641 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1597 Afer_1598 Afer_1598 Afer_1598 1684616 1685230 - metallophosphoesterase PFAM: metallophosphoesterase~KEGG: mpa:MAP0859c hypothetical protein gene gene1642 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1598 Afer_1599 Afer_1599 Afer_1599 1685728 1686822 - Nucleotidyl transferase PFAM: Nucleotidyl transferase%3B transferase hexapeptide repeat containing protein~KEGG: tfu:Tfu_0414 UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N- acetyltransferase gene gene1643 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1599 Afer_1600 Afer_1600 Afer_1600 1686846 1688405 - hypothetical protein KEGG: glycoside hydrolase family 5 protein gene gene1644 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1600 Afer_1601 Afer_1601 Afer_1601 1688498 1690018 + thiamine pyrophosphate protein domain protein TPP-binding PFAM: thiamine pyrophosphate protein domain protein TPP-binding%3B thiamine pyrophosphate protein TPP binding domain protein~KEGG: mva:Mvan_5213 hypothetical protein gene gene1645 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1601 Afer_1602 Afer_1602 Afer_1602 1690055 1692121 - peptidase S9 prolyl oligopeptidase active site domain protein PFAM: peptidase S9 prolyl oligopeptidase active site domain protein%3B peptidase S9B dipeptidylpeptidase IV domain protein~KEGG: hypothetical protein%3B K01278 dipeptidyl- peptidase 4 gene gene1646 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1602 Afer_1603 Afer_1603 Afer_1603 1692457 1692975 - MaoC domain protein dehydratase PFAM: MaoC domain protein dehydratase~KEGG: saq:Sare_0676 dehydratase gene gene1647 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1603 Afer_1604 Afer_1604 Afer_1604 1692980 1693465 - conserved hypothetical protein KEGG: ace:Acel_1395 hypothetical protein gene gene1648 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1604 Afer_1605 Afer_1605 Afer_1605 1693513 1694274 - Abortive infection protein PFAM: Abortive infection protein~KEGG: mtu:Rv0658c integral membrane protein gene gene1649 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1605 Afer_1606 Afer_1606 Afer_1606 1694496 1696478 + ATP-dependent metalloprotease FtsH KEGG: dde:Dde_1513 FtsH peptidase~TIGRFAM: ATP-dependent metalloprotease FtsH~PFAM: AAA ATPase central domain protein%3B peptidase M41%3B peptidase M41 FtsH extracellular%3B ATPase associated with various cellular activities AAA_5~SMART: AAA ATPase gene gene1650 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1606 Afer_1607 Afer_1607 Afer_1607 1696486 1697349 + YdjC family protein PFAM: YdjC family protein~KEGG: ttj:TTHB029 hypothetical protein gene gene1651 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1607 Afer_1608 Afer_1608 Afer_1608 1697273 1697668 - hypothetical protein KEGG: csa:Csal_1939 sterol-binding gene gene1652 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1608 Afer_1609 Afer_1609 Afer_1609 1697679 1698572 - LmbE family protein PFAM: LmbE family protein~KEGG: sen:SACE_0909 N- acetylglucosaminylphosphatidylinositol deacetylase gene gene1653 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1609 Afer_1610 Afer_1610 Afer_1610 1698627 1699658 - hypothetical protein KEGG: GK23692 gene gene1654 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1610 Afer_1611 Afer_1611 Afer_1611 1699682 1702843 - DNA polymerase III%2C alpha subunit KEGG: fal:FRAAL2180 error-prone DNA polymerase~TIGRFAM: DNA polymerase III%2C alpha subunit~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type~SMART: phosphoesterase PHP domain protein gene gene1655 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1611 Afer_1612 Afer_1612 Afer_1612 1702816 1704369 - putative DNA-directed DNA polymerase KEGG: fal:FRAAL2179 putative DNA-directed DNA polymerase gene gene1656 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1612 Afer_1613 Afer_1613 Afer_1613 1704366 1704953 - hypothetical protein KEGG: cur:cur_0403 hypothetical protein gene gene1657 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1613 Afer_1614 Afer_1614 Afer_1614 1704983 1705735 - transcriptional regulator%2C GntR family PFAM: UbiC transcription regulator-associated domain protein%3B regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: dsy:DSY4747 hypothetical protein gene gene1658 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1614 Afer_1615 Afer_1615 Afer_1615 1706030 1707220 - 3'-5' exonuclease PFAM: 3'-5' exonuclease%3B HRDC domain protein~SMART: 3'-5' exonuclease%3B HRDC domain protein~KEGG: mca:MCA2378 ribonuclease D gene gene1659 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1615 Afer_1616 Afer_1616 Afer_1616 1707874 1708281 + histidine triad (HIT) protein PFAM: histidine triad (HIT) protein~KEGG: scl:sce6886 histidine triad%2C HIT-like protein gene gene1660 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1616 Afer_1617 Afer_1617 Afer_1617 1708374 1708503 + pseudogene gene1661 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1617 Afer_1618 Afer_1618 Afer_1618 1708576 1708710 + pseudogene gene1662 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1618 Afer_1619 Afer_1619 Afer_1619 1708915 1709803 + pseudogene gene1663 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1619 Afer_1620 Afer_1620 Afer_1620 1709907 1710299 - PilT protein domain protein PFAM: PilT protein domain protein~KEGG: mva:Mvan_1717 PilT domain-containing protein gene gene1664 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1620 Afer_1621 Afer_1621 Afer_1621 1710299 1710574 - prevent-host-death family protein TIGRFAM: prevent-host-death family protein~PFAM: protein of unknown function DUF172~KEGG: mbb:BCG_3454c hypothetical protein gene gene1665 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1621 Afer_1622 Afer_1622 Afer_1622 1710666 1710815 - pseudogene gene1666 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1622 Afer_1623 Afer_1623 Afer_1623 1711139 1711309 + pseudogene gene1667 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1623 Afer_1624 Afer_1624 Afer_1624 1711461 1712696 - tyrosyl-tRNA synthetase KEGG: rrs:RoseRS_2069 tyrosyl-tRNA synthetase~TIGRFAM: tyrosyl-tRNA synthetase~PFAM: aminoacyl-tRNA synthetase class Ib%3B RNA- binding S4 domain protein gene gene1668 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1624 Afer_1625 Afer_1625 Afer_1625 1712709 1714349 - 2-oxoglutarate decarboxylase KEGG: gka:GK2875 2-succinyl-6-hydroxy-2%2C4- cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase gene gene1669 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1625 Afer_1626 Afer_1626 Afer_1626 1714385 1715221 + thioesterase%2C menaquinone synthesis protein KEGG: cch:Cag_1720 thioesterase%2C menaquinone synthesis protein gene gene1670 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1626 Afer_1627 Afer_1627 Afer_1627 1715218 1716105 - 1%2C4-dihydroxy-2-naphthoateoctaprenyltransferase TIGRFAM: 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase~PFAM: UbiA prenyltransferase~KEGG: tfu:Tfu_0788 1%2C4-dihydroxy-2-naphthoate octaprenyltransferase gene gene1671 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1627 Afer_1628 Afer_1628 Afer_1628 1716164 1717351 + AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: mkm:Mkms_0740 O-succinylbenzoic acid--CoA ligase gene gene1672 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1628 Afer_1629 Afer_1629 Afer_1629 1717348 1718805 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: rso:RS02383 amino acid transporter transmembrane protein gene gene1673 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1629 Afer_1630 Afer_1630 Afer_1630 1718934 1719680 - short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: cur:cur_1752 dehydrogenase related to short- chain alcohol dehydrogenases gene gene1674 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1630 Afer_1631 Afer_1631 Afer_1631 1719747 1721699 + protein of unknown function DUF255 PFAM: protein of unknown function DUF255~KEGG: nfa:nfa48210 hypothetical protein gene gene1675 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1631 Afer_1632 Afer_1632 Afer_1632 1721971 1722585 + hypothetical protein gene gene1676 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1632 Afer_1633 Afer_1633 Afer_1633 1722615 1723199 + uncharacterized peroxidase-related enzyme TIGRFAM: uncharacterized peroxidase-related enzyme%3B alkylhydroperoxidase like protein%2C AhpD family~PFAM: Carboxymuconolactone decarboxylase~KEGG: bja:bll3817 hypothetical protein gene gene1677 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1633 Afer_1634 Afer_1634 Afer_1634 1723362 1724474 + pseudogene gene1678 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1634 Afer_1635 Afer_1635 Afer_1635 1724970 1725524 + DNA binding domain protein%2C excisionase family TIGRFAM: DNA binding domain protein%2C excisionase family~PFAM: regulatory protein MerR~KEGG: fra:Francci3_1856 excisionase/Xis%2C DNA- binding gene gene1679 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1635 Afer_1636 Afer_1636 Afer_1636 1725529 1726089 + conserved hypothetical protein KEGG: sbl:Sbal_4436 hypothetical protein gene gene1680 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1636 Afer_1637 Afer_1637 Afer_1637 1726886 1727332 - protein of unknown function DUF1707 PFAM: protein of unknown function DUF1707~KEGG: sco:SCO2893 hypothetical protein gene gene1681 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1637 Afer_1638 Afer_1638 Afer_1638 1727456 1731025 + DNA polymerase III%2C alpha subunit KEGG: ace:Acel_1054 DNA polymerase III subunit alpha~TIGRFAM: DNA polymerase III%2C alpha subunit~PFAM: DNA polymerase III alpha subunit%3B PHP domain protein%3B nucleic acid binding OB-fold tRNA/helicase-type~SMART: phosphoesterase PHP domain protein gene gene1682 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1638 Afer_1639 Afer_1639 Afer_1639 1731015 1731719 + peptidase S51 dipeptidase E PFAM: peptidase S51 dipeptidase E~KEGG: smt:Smal_0740 peptidase S51 dipeptidase E gene gene1683 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1639 Afer_1640 Afer_1640 Afer_1640 1731735 1733147 - glutamate decarboxylase TIGRFAM: glutamate decarboxylase~PFAM: Pyridoxal-dependent decarboxylase~KEGG: bca:BCE_2691 glutamate decarboxylase gene gene1684 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1640 Afer_1641 Afer_1641 Afer_1641 1733518 1735488 - AMP-dependent synthetase and ligase PFAM: AMP-dependent synthetase and ligase~KEGG: tac:Ta0769 acetyl-coenzyme A synthetase gene gene1685 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1641 Afer_1642 Afer_1642 Afer_1642 1735524 1736732 - hypothetical protein KEGG: rha:RHA1_ro04406 amidase gene gene1686 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1642 Afer_1643 Afer_1643 Afer_1643 1736742 1737422 - hypothetical protein gene gene1687 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1643 Afer_1644 Afer_1644 Afer_1644 1737516 1737983 + 7-cyano-7-deazaguanine reductase TIGRFAM: 7-cyano-7-deazaguanine reductase~PFAM: GTP cyclohydrolase I~KEGG: hpa:HPAG1_1339 7-cyano-7-deazaguanine reductase gene gene1688 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1644 Afer_1645 Afer_1645 Afer_1645 1737980 1738552 + protein of unknown function DUF165 PFAM: protein of unknown function DUF165~KEGG: kra:Krad_4383 hypothetical protein gene gene1689 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1645 Afer_1646 Afer_1646 Afer_1646 1738549 1739496 + protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: gtn:GTNG_1176 transporter%2C EamA family gene gene1690 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1646 Afer_1647 Afer_1647 Afer_1647 1740085 1740447 - resolvase domain protein PFAM: Resolvase domain~KEGG: ppd:Ppro_1125 resolvase domain-containing protein gene gene1691 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1647 Afer_1648 Afer_1648 Afer_1648 1740464 1740904 - death-on-curing family protein TIGRFAM: death-on-curing family protein~PFAM: filamentation induced by cAMP protein Fic~KEGG: rca:Rcas_2210 death-on-curing family protein gene gene1692 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1648 Afer_1649 Afer_1649 Afer_1649 1741185 1741583 - hypothetical protein KEGG: rci:RCIX1146 hypothetical protein gene gene1693 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1649 Afer_1650 Afer_1650 Afer_1650 1741693 1742190 - hypothetical protein gene gene1694 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1650 Afer_1651 Afer_1651 Afer_1651 1742252 1742500 - hypothetical protein gene gene1695 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1651 Afer_1652 Afer_1652 Afer_1652 1742666 1742980 - CopG domain protein DNA-binding domain protein PFAM: CopG domain protein DNA-binding domain protein gene gene1696 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1652 Afer_1653 Afer_1653 Afer_1653 1742977 1743273 - hypothetical protein gene gene1697 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1653 Afer_1654 Afer_1654 Afer_1654 1743533 1744555 + hypothetical protein KEGG: mkm:Mkms_5755 transposase%2C mutator type gene gene1698 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1654 Afer_1655 Afer_1655 Afer_1655 1744560 1744829 + hypothetical protein KEGG: mva:Mvan_0585 transposase%2C mutator type gene gene1699 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1655 Afer_1656 Afer_1656 Afer_1656 1745009 1745224 + hypothetical protein gene gene1700 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1656 Afer_1657 Afer_1657 Afer_1657 1745265 1745771 - methylpurine-DNA glycosylase (MPG) PFAM: methylpurine-DNA glycosylase (MPG)~KEGG: rpt:Rpal_2856 DNA-3-methyladenine glycosylase gene gene1701 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1657 Afer_1658 Afer_1658 Afer_1658 1745743 1747143 - argininosuccinate lyase KEGG: rca:Rcas_3075 argininosuccinate lyase~TIGRFAM: argininosuccinate lyase~PFAM: fumarate lyase gene gene1702 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1658 Afer_1659 Afer_1659 Afer_1659 1747140 1748336 - argininosuccinate synthase KEGG: fra:Francci3_3169 argininosuccinate synthase~TIGRFAM: argininosuccinate synthase~PFAM: argininosuccinate synthase%3B ExsB family protein gene gene1703 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1659 Afer_1660 Afer_1660 Afer_1660 1748492 1748974 - arginine repressor%2C ArgR TIGRFAM: arginine repressor~PFAM: arginine repressor~KEGG: msm:MSMEG_3771 arginine repressor gene gene1704 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1660 Afer_1661 Afer_1661 Afer_1661 1748980 1749924 - aspartate/ornithine carbamoyltransferase Asp/Orn- binding region PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region%3B aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain~KEGG: ace:Acel_1259 ornithine carbamoyltransferase gene gene1705 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1661 Afer_1662 Afer_1662 Afer_1662 1749927 1751093 - aminotransferase class-III PFAM: aminotransferase class-III~KEGG: art:Arth_1499 acetylornithine and succinylornithine aminotransferases gene gene1706 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1662 Afer_1663 Afer_1663 Afer_1663 1751090 1751965 - acetylglutamate kinase TIGRFAM: acetylglutamate kinase~PFAM: aspartate/glutamate/uridylate kinase~KEGG: predicted protein%3B K00930 acetylglutamate kinase gene gene1707 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1663 Afer_1664 Afer_1664 Afer_1664 1751962 1753149 - arginine biosynthesis bifunctional protein ArgJ KEGG: sen:SACE_5261 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein~TIGRFAM: arginine biosynthesis bifunctional protein ArgJ~PFAM: arginine biosynthesis protein ArgJ gene gene1708 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1664 Afer_1665 Afer_1665 Afer_1665 1753140 1754153 - N-acetyl-gamma-glutamyl-phosphate reductase KEGG: pmy:Pmen_3933 N-acetyl-gamma-glutamyl- phosphate reductase~TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase~PFAM: Semialdehyde dehydrogenase NAD - binding%3B Semialdehyde dehydrogenase dimerization region gene gene1709 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1665 Afer_1666 Afer_1666 Afer_1666 1754247 1754618 + protein of unknown function DUF805 PFAM: protein of unknown function DUF805~KEGG: saq:Sare_1608 hypothetical protein gene gene1710 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1666 Afer_1667 Afer_1667 Afer_1667 1754755 1756080 + conserved hypothetical protein KEGG: stp:Strop_4549 hypothetical protein gene gene1711 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1667 Afer_1668 Afer_1668 Afer_1668 1756184 1757710 + protein of unknown function DUF404 PFAM: protein of unknown function DUF404%3B protein of unknown function DUF407~KEGG: fre:Franean1_2098 hypothetical protein gene gene1712 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1668 Afer_1669 Afer_1669 Afer_1669 1757707 1758648 + protein of unknown function DUF403 PFAM: protein of unknown function DUF403~KEGG: cms:CMS_0253 hypothetical protein gene gene1713 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1669 Afer_1670 Afer_1670 Afer_1670 1758645 1759478 + transglutaminase domain protein PFAM: transglutaminase domain protein%3B transglutaminase domain protein~SMART: transglutaminase domain protein~KEGG: rha:RHA1_ro01282 transglutaminase-like enzyme gene gene1714 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1670 Afer_1671 Afer_1671 Afer_1671 1760162 1760566 - protein of unknown function DUF1634 PFAM: protein of unknown function DUF1634~KEGG: sus:Acid_5631 hypothetical protein gene gene1715 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1671 Afer_1672 Afer_1672 Afer_1672 1760563 1761408 - protein of unknown function DUF81 PFAM: protein of unknown function DUF81~KEGG: mxa:MXAN_4782 hypothetical protein gene gene1716 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1672 Afer_1673 Afer_1673 Afer_1673 1761430 1763805 - phenylalanyl-tRNA synthetase%2C beta subunit KEGG: ade:Adeh_1971 phenylalanyl-tRNA synthetase beta subunit~TIGRFAM: phenylalanyl-tRNA synthetase%2C beta subunit gene gene1717 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1673 Afer_1674 Afer_1674 Afer_1674 1763802 1764902 - phenylalanyl-tRNA synthetase%2C alpha subunit TIGRFAM: phenylalanyl-tRNA synthetase%2C alpha subunit~PFAM: phenylalanyl-tRNA synthetase class IIc%3B aminoacyl tRNA synthetase class II domain protein~KEGG: afw:Anae109_1883 phenylalanyl-tRNA synthetase%2C alpha subunit gene gene1718 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1674 Afer_1675 Afer_1675 Afer_1675 1764944 1765642 - tRNA/rRNA methyltransferase (SpoU) PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: sru:SRU_0504 putative RNA methyltransferase gene gene1719 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1675 Afer_1676 Afer_1676 Afer_1676 1765707 1766075 - ribosomal protein L20 TIGRFAM: ribosomal protein L20~PFAM: ribosomal protein L20~KEGG: kra:Krad_3167 ribosomal protein L20 gene gene1720 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1676 Afer_1677 Afer_1677 Afer_1677 1766096 1766293 - ribosomal protein L35 TIGRFAM: ribosomal protein L35~PFAM: ribosomal protein L35~KEGG: dau:Daud_1382 ribosomal protein L35 gene gene1721 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1677 Afer_1678 Afer_1678 Afer_1678 1766488 1767000 - translation initiation factor IF-3 TIGRFAM: translation initiation factor IF-3~PFAM: initiation factor 3~KEGG: saq:Sare_1875 translation initiation factor IF-3 gene gene1722 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1678 Afer_1679 Afer_1679 Afer_1679 1767145 1767528 - hypothetical protein gene gene1723 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1679 Afer_1680 Afer_1680 Afer_1680 1767554 1767832 - hypothetical protein gene gene1724 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1680 Afer_1681 Afer_1681 Afer_1681 1767839 1768714 - ATP phosphoribosyltransferase KEGG: ace:Acel_1270 ATP phosphoribosyltransferase~TIGRFAM: ATP phosphoribosyltransferase~PFAM: ATP phosphoribosyltransferase catalytic region%3B Histidine biosynthesis protein HisG domain gene gene1725 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1681 Afer_1682 Afer_1682 Afer_1682 1768708 1769196 - 6%2C7-dimethyl-8-ribityllumazine synthase KEGG: ent:Ent638_0883 riboflavin synthase subunit beta~TIGRFAM: 6%2C7-dimethyl-8-ribityllumazine synthase~PFAM: 67-dimethyl-8-ribityllumazine synthase gene gene1726 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1682 Afer_1683 Afer_1683 Afer_1683 1769193 1770446 - GTP cyclohydrolase II KEGG: Os02g0572400%3B hypothetical protein %3B K01497 GTP cyclohydrolase II~TIGRFAM: GTP cyclohydrolase II%3B 3%2C4-dihydroxy-2- butanone 4-phosphate synthase~PFAM: GTP cyclohydrolase II%3B 34-dihydroxy-2- butanone 4-phosphate synthase gene gene1727 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1683 Afer_1684 Afer_1684 Afer_1684 1770443 1771033 - Lumazine-binding protein PFAM: Lumazine-binding protein~KEGG: tfu:Tfu_1078 riboflavin synthase subunit alpha gene gene1728 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1684 Afer_1685 Afer_1685 Afer_1685 1771084 1772136 - riboflavin biosynthesis protein RibD TIGRFAM: riboflavin biosynthesis protein RibD~PFAM: bifunctional deaminase-reductase domain protein%3B CMP/dCMP deaminase zinc-binding~KEGG: gme:Gmet_1624 5-amino-6-(5- phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase gene gene1729 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1685 Afer_1686 Afer_1686 Afer_1686 1772133 1772624 - molybdenum cofactor synthesis domain protein TIGRFAM: molybdenum cofactor synthesis domain protein~PFAM: molybdopterin binding domain~KEGG: fra:Francci3_4037 molybdopterin adenylyltransferase gene gene1730 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1686 Afer_1687 Afer_1687 Afer_1687 1772625 1773515 - Methionyl-tRNA formyltransferase PFAM: formyl transferase domain protein~KEGG: nca:Noca_2442 methionyl-tRNA formyltransferase gene gene1731 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1687 Afer_1688 Afer_1688 Afer_1688 1773518 1774012 - peptide deformylase KEGG: ace:Acel_1279 peptide deformylase~TIGRFAM: peptide deformylase~PFAM: formylmethionine deformylase gene gene1732 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1688 Afer_1689 Afer_1689 Afer_1689 1774048 1775172 - hypothetical protein KEGG: GK21128 gene gene1733 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1689 Afer_1690 Afer_1690 Afer_1690 1775173 1776933 - hypothetical protein KEGG: lch:Lcho_0048 electron transport protein SCO1/SenC gene gene1734 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1690 Afer_1691 Afer_1691 Afer_1691 1777062 1778807 - Primosomal protein N' (replication factor Y) - superfamily II helicase-like protein KEGG: afw:Anae109_0770 primosomal protein N' gene gene1735 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1691 Afer_1692 Afer_1692 Afer_1692 1778809 1780002 - S-adenosylmethionine synthetase KEGG: kra:Krad_2989 methionine adenosyltransferase~TIGRFAM: S-adenosylmethionine synthetase~PFAM: S-adenosylmethionine synthetase gene gene1736 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1692 Afer_1693 Afer_1693 Afer_1693 1780035 1781237 - phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase~PFAM: DNA/pantothenate metabolism flavoprotein domain protein%3B flavoprotein~KEGG: ace:Acel_1291 phosphopantothenate-cysteine ligase / phosphopantothenoylcysteine decarboxylase gene gene1737 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1693 Afer_1694 Afer_1694 Afer_1694 1781242 1781526 - DNA-directed RNA polymerase%2C omega subunit TIGRFAM: DNA-directed RNA polymerase%2C omega subunit~KEGG: fra:Francci3_3194 DNA-directed RNA polymerase subunit omega gene gene1738 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1694 Afer_1695 Afer_1695 Afer_1695 1781571 1782113 - Guanylate kinase KEGG: syw:SYNW1837 guanylate kinase~PFAM: guanylate kinase~SMART: guanylate kinase/L-type calcium channel region gene gene1739 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1695 Afer_1696 Afer_1696 Afer_1696 1782110 1782430 - conserved hypothetical protein KEGG: saq:Sare_1853 hypothetical protein gene gene1740 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1696 Afer_1697 Afer_1697 Afer_1697 1782489 1783190 - orotidine 5'-phosphate decarboxylase KEGG: nfa:pnf11210 putative orotidine 5'-phosphate decarboxylase~TIGRFAM: orotidine 5'-phosphate decarboxylase~PFAM: Orotidine 5'-phosphate decarboxylase gene gene1741 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1697 Afer_1698 Afer_1698 Afer_1698 1783187 1784116 - dihydroorotate dehydrogenase family protein TIGRFAM: dihydroorotate dehydrogenase family protein~PFAM: dihydroorotate dehydrogenase~KEGG: gur:Gura_2150 dihydroorotate dehydrogenase family protein gene gene1742 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1698 Afer_1699 Afer_1699 Afer_1699 1784117 1787419 - carbamoyl-phosphate synthase%2C large subunit TIGRFAM: carbamoyl-phosphate synthase%2C large subunit~PFAM: Carbamoyl-phosphate synthase L chain ATP- binding%3B ATP-dependent carboxylate-amine ligase domain protein ATP-grasp%3B MGS domain protein%3B Carbamoyl-phosphate synthetase large chain oligomerisation%3B Carbamoyl- phosphate synthetase large chain domain protein~KEGG: gvi:gll1769 carbamoyl phosphate synthetase large chain gene gene1743 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1699 Afer_1700 Afer_1700 Afer_1700 1787412 1788557 - carbamoyl-phosphate synthase%2C small subunit TIGRFAM: carbamoyl-phosphate synthase%2C small subunit~PFAM: glutamine amidotransferase class-I%3B Carbamoyl- phosphate synthase small chain~KEGG: ade:Adeh_1620 carbamoyl phosphate synthase small subunit gene gene1744 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1700 Afer_1701 Afer_1701 Afer_1701 1788544 1789875 - amidohydrolase PFAM: amidohydrolase~KEGG: ser:SERP0767 dihydroorotase gene gene1745 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1701 Afer_1702 Afer_1702 Afer_1702 1789863 1790795 - aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain%3B aspartate/ornithine carbamoyltransferase Asp/Orn-binding region~KEGG: ttj:TTHA0782 aspartate carbamoyltransferase catalytic subunit gene gene1746 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1702 Afer_1703 Afer_1703 Afer_1703 1790792 1791301 - Uracil phosphoribosyltransferase PFAM: phosphoribosyltransferase~KEGG: tfu:Tfu_1053 pyrimidine regulatory protein PyrR gene gene1747 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1703 Afer_1704 Afer_1704 Afer_1704 1791480 1791605 - hypothetical protein gene gene1748 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1704 Afer_1705 Afer_1705 Afer_1705 1791752 1792519 - hypothetical protein KEGG: sus:Acid_6905 hypothetical protein gene gene1749 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1705 Afer_1706 Afer_1706 Afer_1706 1792661 1793314 - hypothetical protein KEGG: bpm:BURPS1710b_0944 cytochrome c oxidase subunit I gene gene1750 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1706 Afer_1707 Afer_1707 Afer_1707 1793314 1795263 - Cytochrome-c oxidase PFAM: cytochrome c oxidase subunit I~KEGG: syp:SYNPCC7002_A0726 cytochrome oxidase II large subunit gene gene1751 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1707 Afer_1708 Afer_1708 Afer_1708 1795289 1796251 - cytochrome c oxidase subunit II PFAM: cytochrome c oxidase subunit II~KEGG: gvi:glr0739 cytochrome c oxidase subunit II gene gene1752 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1708 Afer_1709 Afer_1709 Afer_1709 1796248 1796961 - hypothetical protein KEGG: tvo:TVN0360 hypothetical protein gene gene1753 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1709 Afer_1710 Afer_1710 Afer_1710 1797029 1797655 - Redoxin domain protein PFAM: Redoxin domain protein%3B alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen%3B Thioredoxin domain~KEGG: ttj:TTHA1728 hypothetical protein gene gene1754 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1710 Afer_1711 Afer_1711 Afer_1711 1797652 1798545 - protoheme IX farnesyltransferase TIGRFAM: protoheme IX farnesyltransferase~PFAM: UbiA prenyltransferase~KEGG: kra:Krad_2921 protoheme IX farnesyltransferase gene gene1755 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1711 Afer_1712 Afer_1712 Afer_1712 1798662 1799837 + peptidase M24 PFAM: peptidase M24~KEGG: cef:CE1738 putative cytoplasmic peptidase gene gene1756 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1712 Afer_1713 Afer_1713 Afer_1713 1799909 1800478 + translation elongation factor P TIGRFAM: translation elongation factor P~PFAM: Elongation factor P %3B Elongation factor P/YeiP protein%3B Elongation factor KOW domain protein~KEGG: tfu:Tfu_1093 elongation factor P gene gene1757 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1713 Afer_1714 Afer_1714 Afer_1714 1800471 1800908 + NusB antitermination factor TIGRFAM: transcription antitermination factor NusB~PFAM: NusB/RsmB/TIM44~KEGG: kra:Krad_3008 NusB antitermination factor gene gene1758 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1714 Afer_1715 Afer_1715 Afer_1715 1800905 1801573 - hypothetical protein gene gene1759 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1715 Afer_1716 Afer_1716 Afer_1716 1801661 1802122 - 3-dehydroquinate dehydratase%2C type II KEGG: sth:STH1866 3-dehydroquinate dehydratase~TIGRFAM: 3-dehydroquinate dehydratase%2C type II~PFAM: dehydroquinase class II gene gene1760 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1716 Afer_1717 Afer_1717 Afer_1717 1802119 1803183 - 3-dehydroquinate synthase PFAM: 3-dehydroquinate synthase~KEGG: saq:Sare_1253 3-dehydroquinate synthase gene gene1761 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1717 Afer_1718 Afer_1718 Afer_1718 1803183 1804361 - chorismate synthase KEGG: stp:Strop_1845 chorismate synthase~TIGRFAM: chorismate synthase~PFAM: chorismate synthase gene gene1762 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1718 Afer_1719 Afer_1719 Afer_1719 1804366 1805031 - conserved hypothetical protein KEGG: kra:Krad_4652 hypothetical protein gene gene1763 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1719 Afer_1720 Afer_1720 Afer_1720 1805110 1805829 + protein tyrosine/serine phosphatase KEGG: mul:MUL_4739 phosphotyrosine protein phosphatase PtpB gene gene1764 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1720 Afer_1721 Afer_1721 Afer_1721 1805910 1806392 - transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: msm:MSMEG_5595 MarR-family protein transcriptional regulator gene gene1765 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1721 Afer_1722 Afer_1722 Afer_1722 1806454 1807005 + YceI family protein PFAM: YceI family protein~KEGG: ace:Acel_0530 YceI family protein gene gene1766 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1722 Afer_1723 Afer_1723 Afer_1723 1807159 1807773 - nitrogen-fixing NifU domain protein PFAM: nitrogen-fixing NifU domain protein~KEGG: pcr:Pcryo_2202 HesB/YadR/YfhF gene gene1767 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1723 Afer_1724 Afer_1724 Afer_1724 1807813 1809018 + protein of unknown function DUF201 KEGG: ank:AnaeK_1423 protein of unknown function DUF201 gene gene1768 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1724 Afer_1725 Afer_1725 Afer_1725 1809029 1810345 + Radical SAM domain protein PFAM: Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB~KEGG: ade:Adeh_2438 radical SAM family protein gene gene1769 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1725 Afer_1726 Afer_1726 Afer_1726 1810342 1812123 + UvrD/REP helicase PFAM: UvrD/REP helicase%3B HRDC domain protein~KEGG: sen:SACE_1092 ATP-dependent DNA helicase gene gene1770 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1726 Afer_1727 Afer_1727 Afer_1727 1812120 1812896 - exodeoxyribonuclease III Xth TIGRFAM: exodeoxyribonuclease III Xth%3B exodeoxyribonuclease III~PFAM: Endonuclease/exonuclease/phosphatase~KEGG: ace:Acel_1469 exodeoxyribonuclease III gene gene1771 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1727 Afer_1728 Afer_1728 Afer_1728 1812893 1813321 - Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ~KEGG: rxy:Rxyl_1380 3-hydroxyacyl-[acyl-carrier- protein] dehydratase gene gene1772 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1728 Afer_1729 Afer_1729 Afer_1729 1813400 1813576 - Protein of unknown function DUF1059 PFAM: Protein of unknown function DUF1059~KEGG: rec:RHECIAT_CH0003208 hypothetical protein gene gene1773 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1729 Afer_1730 Afer_1730 Afer_1730 1813573 1813749 - hypothetical protein gene gene1774 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1730 Afer_1731 Afer_1731 Afer_1731 1813805 1814941 - diguanylate phosphodiesterase PFAM: EAL domain protein~SMART: EAL domain protein~KEGG: kra:Krad_2441 diguanylate phosphodiesterase gene gene1775 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1731 Afer_1732 Afer_1732 Afer_1732 1815072 1818905 + 2-oxoglutarate dehydrogenase%2C E1 subunit TIGRFAM: 2-oxoglutarate dehydrogenase%2C E1 subunit~PFAM: Transketolase central region%3B dehydrogenase E1 component%3B catalytic domain of components of various dehydrogenase complexes~KEGG: ace:Acel_0586 alpha-ketoglutarate decarboxylase gene gene1776 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1732 Afer_1733 Afer_1733 Afer_1733 1818936 1819691 - alpha/beta hydrolase fold protein PFAM: alpha/beta hydrolase fold~KEGG: fre:Franean1_2175 alpha/beta hydrolase fold gene gene1777 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1733 Afer_1734 Afer_1734 Afer_1734 1819745 1821019 + diacylglycerol kinase catalytic region PFAM: diacylglycerol kinase catalytic region~SMART: diacylglycerol kinase catalytic region~KEGG: rxy:Rxyl_1713 hypothetical protein gene gene1778 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1734 Afer_1735 Afer_1735 Afer_1735 1821000 1821923 - domain of unknown function DUF1731 PFAM: domain of unknown function DUF1731%3B NAD- dependent epimerase/dehydratase~KEGG: ote:Oter_2666 hypothetical protein gene gene1779 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1735 Afer_1736 Afer_1736 Afer_1736 1822115 1822546 - heat shock protein Hsp20 PFAM: heat shock protein Hsp20~KEGG: rha:RHA1_ro08348 heat shock protein (18 kDa antigen-like protein) gene gene1780 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1736 Afer_1737 Afer_1737 Afer_1737 1822698 1824062 + ABC-1 domain protein PFAM: ABC-1 domain protein~KEGG: fal:FRAAL6034 ABC transporter%2C ATP-binding protein gene gene1781 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1737 Afer_1738 Afer_1738 Afer_1738 1824059 1824997 + hypothetical protein KEGG: lbr:LVIS_2016 hypothetical protein gene gene1782 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1738 Afer_1739 Afer_1739 Afer_1739 1825039 1825968 + UbiA prenyltransferase PFAM: UbiA prenyltransferase~KEGG: cdi:DIP2196 phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase gene gene1783 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1739 Afer_1740 Afer_1740 Afer_1740 1825973 1827361 + FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: sco:SCO4842 oxidoreductase gene gene1784 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1740 Afer_1741 Afer_1741 Afer_1741 1827371 1828129 + short-chain dehydrogenase/reductase SDR PFAM: short-chain dehydrogenase/reductase SDR%3B KR domain protein~KEGG: sco:SCO4841 short-chain dehydrogenase gene gene1785 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1741 Afer_1742 Afer_1742 Afer_1742 1828145 1831243 - SpoIID/LytB domain protein TIGRFAM: SpoIID/LytB domain protein~PFAM: Stage II sporulation D domain protein%3B Two component regulator propeller~KEGG: ace:Acel_0423 SpoIID/LytB domain-containing protein gene gene1786 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1742 Afer_1743 Afer_1743 Afer_1743 1831382 1832335 + hypothetical protein KEGG: azo:azo3908 putative serine/threonine protein kinase gene gene1787 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1743 Afer_1744 Afer_1744 Afer_1744 1832335 1833381 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: mxa:MXAN_4614 glycosyl transferase%2C group 1 family protein gene gene1788 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1744 Afer_1745 Afer_1745 Afer_1745 1833378 1834454 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: met:M446_6932 glycosyl transferase group 1 gene gene1789 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1745 Afer_1746 Afer_1746 Afer_1746 1834451 1835602 + glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: rrs:RoseRS_2677 glycosyl transferase family protein gene gene1790 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1746 Afer_1747 Afer_1747 Afer_1747 1835583 1836785 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: fal:FRAAL1238 ABC transporter ATP-binding protein (partial match) gene gene1791 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1747 Afer_1748 Afer_1748 Afer_1748 1836788 1837738 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: fra:Francci3_0724 hypothetical protein gene gene1792 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1748 Afer_1749 Afer_1749 Afer_1749 1837747 1838382 - Endopeptidase Clp PFAM: peptidase S14 ClpP~KEGG: stp:Strop_3499 endopeptidase Clp gene gene1793 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1749 Afer_1750 Afer_1750 Afer_1750 1838566 1839132 - non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family TIGRFAM: non-canonical purine NTP pyrophosphatase%2C rdgB/HAM1 family~PFAM: Ham1 family protein~KEGG: sth:STH344 hypothetical protein gene gene1795 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1750 Afer_1751 Afer_1751 Afer_1751 1839129 1839845 - ribonuclease PH KEGG: hha:Hhal_0973 ribonuclease PH~TIGRFAM: ribonuclease PH~PFAM: 3' exoribonuclease%3B Exoribonuclease%2C phosphorolytic domain 2 gene gene1796 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1751 Afer_1752 Afer_1752 Afer_1752 1839877 1840707 - glutamate racemase KEGG: fal:FRAAL1505 glutamate racemase~TIGRFAM: glutamate racemase~PFAM: Asp/Glu/hydantoin racemase gene gene1797 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1752 Afer_1753 Afer_1753 Afer_1753 1840697 1841110 - Mov34/MPN/PAD-1 family protein PFAM: Mov34/MPN/PAD-1 family protein~SMART: Mov34/MPN/PAD-1 family protein~KEGG: sth:STH1150 hypothetical protein gene gene1798 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1753 Afer_1754 Afer_1754 Afer_1754 1841209 1841724 + SsrA-binding protein TIGRFAM: SsrA-binding protein~PFAM: SmpB protein~KEGG: sfu:Sfum_0771 SsrA-binding protein gene gene1799 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1754 Afer_1755 Afer_1755 Afer_1755 1842188 1842631 + hypothetical protein gene gene1801 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1755 Afer_1756 Afer_1756 Afer_1756 1842686 1842781 + pseudogene gene1802 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1756 Afer_1757 Afer_1757 Afer_1757 1843027 1843358 + pseudogene gene1803 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1757 Afer_1758 Afer_1758 Afer_1758 1843500 1844258 + conserved hypothetical protein KEGG: tcx:Tcr_0902 hypothetical protein gene gene1804 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1758 Afer_1759 Afer_1759 Afer_1759 1844282 1845316 - hypothetical protein KEGG: scl:sce3939 hypothetical protein gene gene1805 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1759 Afer_1760 Afer_1760 Afer_1760 1845354 1846238 - protein of unknown function DUF214 PFAM: protein of unknown function DUF214~KEGG: tfu:Tfu_2477 cell division protein FtsX gene gene1806 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1760 Afer_1761 Afer_1761 Afer_1761 1846235 1846930 - cell division ATP-binding protein FtsE KEGG: ace:Acel_1731 cell division ATP-binding protein FtsE~TIGRFAM: cell division ATP-binding protein FtsE~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1807 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1761 Afer_1762 Afer_1762 Afer_1762 1846995 1848104 - peptide chain release factor 2 TIGRFAM: peptide chain release factor 2~PFAM: Class I peptide chain release factor%3B PCRF domain protein~KEGG: rxy:Rxyl_1620 bacterial peptide chain release factor 2 (bRF-2) gene gene1808 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1762 Afer_1763 Afer_1763 Afer_1763 1848101 1850719 - preprotein translocase%2C SecA subunit TIGRFAM: preprotein translocase%2C SecA subunit~PFAM: SecA DEAD domain protein%3B SecA Wing and Scaffold%3B SecA preprotein cross-linking region~KEGG: ace:Acel_1759 preprotein translocase subunit SecA gene gene1809 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1763 Afer_1764 Afer_1764 Afer_1764 1850741 1851289 - putative sigma 54 modulation protein/ribosomal protein S30EA TIGRFAM: ribosomal subunit interface protein~KEGG: rxy:Rxyl_1622 sigma 54 modulation protein / SSU ribosomal protein S30P gene gene1810 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1764 Afer_1765 Afer_1765 Afer_1765 1851300 1852577 - adenosylhomocysteinase KEGG: gvi:glr3183 adenosylhomocysteinase~TIGRFAM: adenosylhomocysteinase~PFAM: S-adenosyl-L-homocysteine hydrolase%2C NAD binding%3B D-isomer specific 2-hydroxyacid dehydrogenase NAD- binding%3B S-adenosyl-L-homocysteine hydrolase gene gene1811 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1765 Afer_1766 Afer_1766 Afer_1766 1852618 1853643 - Mannose-6-phosphate isomerase PFAM: sugar isomerase (SIS)~KEGG: dau:Daud_0299 bifunctional phosphoglucose/phosphomannose isomerase gene gene1812 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1766 Afer_1767 Afer_1767 Afer_1767 1853631 1853900 - protein of unknown function DUF343 PFAM: protein of unknown function DUF343~KEGG: mva:Mvan_3299 hypothetical protein gene gene1813 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1767 Afer_1768 Afer_1768 Afer_1768 1853897 1855252 - Phosphomannomutase PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I%3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III%3B phosphoglucomutase/phosphomannomutase %3B phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II~KEGG: fre:Franean1_5858 phosphomannomutase/phosphoglucomutase gene gene1814 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1768 Afer_1769 Afer_1769 Afer_1769 1855360 1855569 - hypothetical protein gene gene1815 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1769 Afer_1770 Afer_1770 Afer_1770 1855712 1857250 + acyl-CoA dehydrogenase domain protein PFAM: acyl-CoA dehydrogenase domain protein%3B Acyl- CoA dehydrogenase type 2 domain~KEGG: lic:LIC13009 acyl-CoA dehydrogenase gene gene1816 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1770 Afer_1771 Afer_1771 Afer_1771 1857247 1858053 + hypothetical protein gene gene1817 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1771 Afer_1772 Afer_1772 Afer_1772 1858058 1858744 - peptidase C60 sortase A and B PFAM: peptidase C60 sortase A and B~KEGG: kra:Krad_3106 peptidase C60 sortase A and B gene gene1818 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1772 Afer_1773 Afer_1773 Afer_1773 1858822 1859094 + hypothetical protein gene gene1819 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1773 Afer_1774 Afer_1774 Afer_1774 1859091 1859420 + transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_1861 transposase IS3/IS911 gene gene1820 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1774 Afer_1775 Afer_1775 Afer_1775 1859417 1860295 + Integrase catalytic region PFAM: Integrase catalytic region~KEGG: amr:AM1_A0193 integrase%2C catalytic region gene gene1821 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1775 Afer_1776 Afer_1776 Afer_1776 1860298 1861944 - hypothetical protein KEGG: H02F09.3 gene gene1822 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1776 Afer_1777 Afer_1777 Afer_1777 1862263 1863201 - Citrate (pro-3S)-lyase PFAM: HpcH/HpaI aldolase~KEGG: sgr:SGR_1172 putative lyase gene gene1823 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1777 Afer_1778 Afer_1778 Afer_1778 1863240 1864916 - trehalose synthase KEGG: fal:FRAAL5900 trehalose synthase (maltose alpha-D-glucosyltransferase)~TIGRFAM: trehalose synthase~PFAM: alpha amylase catalytic region~SMART: alpha amylase catalytic sub domain gene gene1824 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1778 Afer_1779 Afer_1779 Afer_1779 1864916 1865689 - Enoyl-CoA hydratase/isomerase PFAM: Enoyl-CoA hydratase/isomerase~KEGG: sen:SACE_6207 enoyl-CoA hydratase-isomerase gene gene1825 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1779 Afer_1780 Afer_1780 Afer_1780 1865682 1866647 - LAO/AO transport system ATPase TIGRFAM: LAO/AO transport system ATPase~PFAM: ArgK protein~KEGG: saq:Sare_3990 LAO/AO transport system ATPase gene gene1826 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1780 Afer_1781 Afer_1781 Afer_1781 1866644 1867915 - UDP-N-acetylglucosamine1-carboxyvinyltransferase TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase~PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase)~KEGG: nfa:nfa10690 UDP-N-acetylglucosamine 1- carboxyvinyltransferase gene gene1827 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1781 Afer_1782 Afer_1782 Afer_1782 1867955 1869430 - major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: scl:sce1439 major facilitator superfamily permease gene gene1828 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1782 Afer_1783 Afer_1783 Afer_1783 1869447 1870130 - Carboxymethylenebutenolidase PFAM: dienelactone hydrolase%3B BAAT/Acyl-CoA thioester hydrolase~KEGG: scl:sce0062 putative carboxymethylenebutenolidase gene gene1829 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1783 Afer_1784 Afer_1784 Afer_1784 1870163 1870621 - pyridoxamine 5'-phosphate oxidase-related FMN- binding PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding~KEGG: mab:MAB_3296 hypothetical protein gene gene1830 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1784 Afer_1785 Afer_1785 Afer_1785 1870605 1871138 - hypothetical protein gene gene1831 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1785 Afer_1786 Afer_1786 Afer_1786 1871138 1872529 - fumarate lyase PFAM: fumarate lyase~KEGG: sgr:SGR_2491 putative fumarate hydratase C gene gene1832 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1786 Afer_1787 Afer_1787 Afer_1787 1872585 1873523 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: msm:MSMEG_3306 zinc-binding alcohol dehydrogenase gene gene1833 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1787 Afer_1788 Afer_1788 Afer_1788 1873460 1873795 - hypothetical protein gene gene1834 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1788 Afer_1789 Afer_1789 Afer_1789 1874059 1874643 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: sgr:SGR_6910 TetR family transcriptional regulator gene gene1835 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1789 Afer_1790 Afer_1790 Afer_1790 1874738 1876351 - dipeptidylaminopeptidase/acylaminoacyl-peptidase-like protein KEGG: pmy:Pmen_1970 peptidase S9 prolyl oligopeptidase gene gene1836 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1790 Afer_1791 Afer_1791 Afer_1791 1876348 1878018 - methylmalonyl-CoA mutase%2C large subunit KEGG: ace:Acel_0674 methylmalonyl-CoA mutase~TIGRFAM: methylmalonyl-CoA mutase%2C large subunit~PFAM: methylmalonyl-CoA mutase gene gene1837 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1791 Afer_1792 Afer_1792 Afer_1792 1878111 1879100 + fructose-1%2C6-bisphosphatase%2C class II TIGRFAM: fructose-1%2C6-bisphosphatase%2C class II~PFAM: GlpX family protein~KEGG: nfa:nfa48000 fructose 1%2C6-bisphosphatase II gene gene1838 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1792 Afer_1793 Afer_1793 Afer_1793 1879061 1879963 - Phosphoesterase HXTX PFAM: Phosphoesterase HXTX~KEGG: sco:SCO4840 secreted protein gene gene1839 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1793 Afer_1794 Afer_1794 Afer_1794 1879960 1880352 - ATP synthase F1%2C epsilon subunit TIGRFAM: ATP synthase F1%2C epsilon subunit~PFAM: H+transporting two-sector ATPase delta/epsilon subunit~KEGG: cbe:Cbei_0419 ATP synthase F1%2C epsilon subunit gene gene1840 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1794 Afer_1795 Afer_1795 Afer_1795 1880355 1881770 - ATP synthase F1%2C beta subunit KEGG: fra:Francci3_3707 F0F1 ATP synthase subunit beta~TIGRFAM: ATP synthase F1%2C beta subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein~SMART: AAA ATPase gene gene1841 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1795 Afer_1796 Afer_1796 Afer_1796 1881767 1882657 - ATP synthase F1%2C gamma subunit TIGRFAM: ATP synthase F1%2C gamma subunit~PFAM: H+transporting two-sector ATPase gamma subunit~KEGG: fre:Franean1_1023 ATP synthase F1%2C gamma subunit gene gene1842 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1796 Afer_1797 Afer_1797 Afer_1797 1882661 1884175 - ATP synthase F1%2C alpha subunit KEGG: ace:Acel_0651 F0F1 ATP synthase subunit alpha~TIGRFAM: ATP synthase F1%2C alpha subunit~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B H+transporting two-sector ATPase alpha/beta subunit domain protein gene gene1843 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1797 Afer_1798 Afer_1798 Afer_1798 1884191 1885057 - ATP synthase F1%2C delta subunit TIGRFAM: ATP synthase F1%2C delta subunit~PFAM: H+transporting two-sector ATPase delta (OSCP) subunit~KEGG: pac:PPA1242 ATP synthase delta chain gene gene1844 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1798 Afer_1799 Afer_1799 Afer_1799 1885057 1885578 - ATP synthase F0%2C B subunit TIGRFAM: ATP synthase F0%2C B subunit~PFAM: H+transporting two-sector ATPase B/B' subunit~KEGG: cmi:CMM_1165 F0F1 ATP synthase subunit B gene gene1845 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1799 Afer_1800 Afer_1800 Afer_1800 1885583 1885858 - ATP synthase F0%2C C subunit TIGRFAM: ATP synthase F0%2C C subunit~PFAM: H+transporting two-sector ATPase C subunit~KEGG: sgr:SGR_2168 putative ATP synthase C chain gene gene1846 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1800 Afer_1801 Afer_1801 Afer_1801 1885963 1886736 - ATP synthase F0%2C A subunit TIGRFAM: ATP synthase F0%2C A subunit~PFAM: H+transporting two-sector ATPase A subunit~KEGG: fal:FRAAL5937 F0F1 ATP synthase subunit A gene gene1847 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1801 Afer_1802 Afer_1802 Afer_1802 1886733 1887149 - inner-membrane translocator KEGG: pde:Pden_5097 inner-membrane translocator gene gene1848 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1802 Afer_1803 Afer_1803 Afer_1803 1887146 1887547 - hypothetical protein gene gene1849 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1803 Afer_1804 Afer_1804 Afer_1804 1887591 1888694 - glycosyl transferase family 4 PFAM: glycosyl transferase family 4~KEGG: kra:Krad_1261 glycosyl transferase family protein gene gene1850 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1804 Afer_1805 Afer_1805 Afer_1805 1888694 1889968 - Glycine hydroxymethyltransferase PFAM: glycine hydroxymethyltransferase%3B Orn/Lys/Arg decarboxylase major region%3B aromatic amino acid beta- eliminating lyase/threonine aldolase~KEGG: afw:Anae109_2733 serine hydroxymethyltransferase gene gene1851 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1805 Afer_1806 Afer_1806 Afer_1806 1890015 1890692 - SUA5/yciO/yrdC domain protein PFAM: SUA5/yciO/yrdC domain~KEGG: lpl:lp_2376 SUA5 family translation factor gene gene1852 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1806 Afer_1807 Afer_1807 Afer_1807 1890679 1891446 - modification methylase%2C HemK family TIGRFAM: modification methylase%2C HemK family~PFAM: methyltransferase small%3B Methyltransferase type 12%3B putative RNA methylase~KEGG: gsu:GSU3103 HemK family modification methylase gene gene1853 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1807 Afer_1808 Afer_1808 Afer_1808 1891455 1892528 - peptide chain release factor 1 TIGRFAM: peptide chain release factor 1~PFAM: Class I peptide chain release factor%3B PCRF domain protein~KEGG: ace:Acel_0641 peptide chain release factor 1 gene gene1854 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1808 Afer_1809 Afer_1809 Afer_1809 1892525 1893454 - hypothetical protein gene gene1855 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1809 Afer_1810 Afer_1810 Afer_1810 1893420 1893644 - ribosomal protein L31 TIGRFAM: ribosomal protein L31~PFAM: ribosomal protein L31~KEGG: ppd:Ppro_2650 50S ribosomal protein L31 gene gene1856 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1810 Afer_1811 Afer_1811 Afer_1811 1893705 1895489 - transcription termination factor Rho KEGG: tfu:Tfu_2421 transcription termination factor Rho~TIGRFAM: transcription termination factor Rho~PFAM: H+transporting two-sector ATPase alpha/beta subunit central region%3B Rho termination factor RNA- binding~SMART: AAA ATPase%3B Cold shock protein gene gene1857 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1811 Afer_1812 Afer_1812 Afer_1812 1895539 1896609 - threonine synthase TIGRFAM: threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: chy:CHY_1911 threonine synthase gene gene1858 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1812 Afer_1813 Afer_1813 Afer_1813 1896621 1897898 - Homoserine dehydrogenase PFAM: homoserine dehydrogenase%3B amino acid-binding ACT domain protein%3B homoserine dehydrogenase NAD-binding~KEGG: fal:FRAAL5951 homoserine dehydrogenase gene gene1859 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1813 Afer_1814 Afer_1814 Afer_1814 1897895 1899175 - diaminopimelate decarboxylase TIGRFAM: diaminopimelate decarboxylase~PFAM: Orn/DAP/Arg decarboxylase 2~KEGG: sco:SCO5353 diaminopimelate decarboxylase gene gene1860 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1814 Afer_1815 Afer_1815 Afer_1815 1899178 1900800 - arginyl-tRNA synthetase KEGG: mva:Mvan_4350 arginyl-tRNA synthetase~TIGRFAM: arginyl-tRNA synthetase gene gene1861 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1815 Afer_1816 Afer_1816 Afer_1816 1901140 1902603 - UDP-N-acetylmuramyl-tripeptide synthetase TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase~PFAM: Mur ligase middle domain protein%3B cytoplasmic peptidoglycan synthetase domain protein~KEGG: hmo:HM1_2054 udp-N-acetylmuramoylalanyl-D- glutamate--2%2C6-diaminopimelate ligase gene gene1863 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1816 Afer_1817 Afer_1817 Afer_1817 1902656 1903582 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: rca:Rcas_3100 glycosyl transferase family protein gene gene1864 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1817 Afer_1818 Afer_1818 Afer_1818 1903551 1904180 - SNARE associated Golgi protein PFAM: SNARE associated Golgi protein~KEGG: ace:Acel_0915 hypothetical protein gene gene1865 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1818 Afer_1819 Afer_1819 Afer_1819 1904227 1904439 + twin-arginine translocation protein%2C TatA/E family subunit TIGRFAM: twin-arginine translocation protein%2C TatA/E family subunit~PFAM: sec-independent translocation protein mttA/Hcf106~KEGG: ttj:TTHA0628 sec-independent protein translocase protein gene gene1866 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1819 Afer_1820 Afer_1820 Afer_1820 1904908 1905825 + Alcohol dehydrogenase GroES domain protein PFAM: Alcohol dehydrogenase GroES domain protein%3B Alcohol dehydrogenase zinc-binding domain protein~KEGG: art:Arth_0066 alcohol dehydrogenase GroES domain protein gene gene1867 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1820 Afer_1821 Afer_1821 Afer_1821 1905822 1906700 + ornithine cyclodeaminase/mu-crystallin PFAM: ornithine cyclodeaminase/mu-crystallin~KEGG: saq:Sare_1353 ornithine cyclodeaminase/mu- crystallin gene gene1868 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1821 Afer_1822 Afer_1822 Afer_1822 1906975 1907403 - hypothetical protein KEGG: fal:FRAAL5121 putative integral membrane protein gene gene1869 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1822 Afer_1823 Afer_1823 Afer_1823 1907393 1909084 - cytochrome c oxidase%2C subunit I KEGG: ace:Acel_0490 cytochrome-c oxidase~TIGRFAM: cytochrome c oxidase%2C subunit I~PFAM: cytochrome c oxidase subunit I gene gene1870 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1823 Afer_1824 Afer_1824 Afer_1824 1909081 1909854 - cytochrome c oxidase subunit II PFAM: cytochrome c oxidase subunit II%3B cytochrome C oxidase subunit II transmembrane region~KEGG: fre:Franean1_1801 cytochrome c oxidase subunit II gene gene1871 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1824 Afer_1825 Afer_1825 Afer_1825 1909847 1911415 - cytochrome b/b6 domain protein PFAM: Cytochrome b/b6 domain~KEGG: fre:Franean1_1812 cytochrome b/b6 domain- containing protein gene gene1872 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1825 Afer_1826 Afer_1826 Afer_1826 1911412 1912314 - Rieske (2Fe-2S) domain protein PFAM: Rieske [2Fe-2S] domain protein~KEGG: fal:FRAAL5110 ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) gene gene1873 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1826 Afer_1827 Afer_1827 Afer_1827 1912311 1913153 - cytochrome c class I PFAM: cytochrome c class I~KEGG: fre:Franean1_1810 cytochrome c class I gene gene1874 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1827 Afer_1828 Afer_1828 Afer_1828 1913172 1913768 - cytochrome c oxidase subunit III PFAM: cytochrome c oxidase subunit III~KEGG: mjl:Mjls_3302 cytochrome c oxidase%2C subunit III gene gene1875 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1828 Afer_1829 Afer_1829 Afer_1829 1913796 1915916 - ATP-dependent DNA helicase KEGG: sen:SACE_5730 ATP-dependent DNA helicase gene gene1876 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1829 Afer_1830 Afer_1830 Afer_1830 1915955 1917025 + uroporphyrinogen decarboxylase KEGG: stp:Strop_1532 uroporphyrinogen decarboxylase~TIGRFAM: uroporphyrinogen decarboxylase~PFAM: Uroporphyrinogen decarboxylase (URO-D) gene gene1877 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1830 Afer_1831 Afer_1831 Afer_1831 1917022 1918365 + protoporphyrinogen oxidase KEGG: ace:Acel_1381 UDP-galactopyranose mutase~TIGRFAM: protoporphyrinogen oxidase~PFAM: amine oxidase%3B FAD dependent oxidoreductase gene gene1878 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1831 Afer_1832 Afer_1832 Afer_1832 1918374 1919450 - nicotinate-nucleotide/dimethylbenzimidazolephosp horibosyltransferase KEGG: rxy:Rxyl_0647 nicotinate-nucleotide- dimethylbenzimidazole phosphoribosyltransferase~TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazolep hosphoribosyltransferase~PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase gene gene1879 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1832 Afer_1833 Afer_1833 Afer_1833 1919450 1919929 - conserved hypothetical protein KEGG: ace:Acel_0440 hypothetical protein gene gene1880 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1833 Afer_1834 Afer_1834 Afer_1834 1920005 1920856 + acyl-CoA thioesterase II KEGG: sen:SACE_5719 acyl-CoA thioesterase II~TIGRFAM: acyl-CoA thioesterase II~PFAM: acyl-CoA thioesterase gene gene1881 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1834 Afer_1835 Afer_1835 Afer_1835 1920888 1922156 - citrate synthase I KEGG: fre:Franean1_7227 citrate synthase I~TIGRFAM: citrate synthase I~PFAM: Citrate synthase gene gene1882 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1835 Afer_1836 Afer_1836 Afer_1836 1922171 1922671 - GCN5-related N-acetyltransferase PFAM: GCN5-related N-acetyltransferase~KEGG: bpt:Bpet3221 acetyltransferase gene gene1883 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1836 Afer_1837 Afer_1837 Afer_1837 1922745 1923599 + protein of unknown function DUF75 PFAM: protein of unknown function DUF75~KEGG: kra:Krad_1842 hypothetical protein gene gene1884 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1837 Afer_1838 Afer_1838 Afer_1838 1923586 1924278 - NUDIX hydrolase PFAM: NUDIX hydrolase~KEGG: mxa:MXAN_5418 hydrolase%2C NUDIX family gene gene1885 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1838 Afer_1839 Afer_1839 Afer_1839 1924651 1925070 - hypothetical protein gene gene1886 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1839 Afer_1840 Afer_1840 Afer_1840 1925076 1925315 - ferredoxin KEGG: tye:THEYE_A1680 ferredoxin gene gene1887 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1840 Afer_1841 Afer_1841 Afer_1841 1925273 1926070 - conserved hypothetical protein KEGG: scl:sce5850 hypothetical protein gene gene1888 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1841 Afer_1842 Afer_1842 Afer_1842 1926308 1927834 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: mva:Mvan_4071 transposase%2C IS4 family protein gene gene1889 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1842 Afer_1843 Afer_1843 Afer_1843 1927931 1928638 - Chlorite dismutase PFAM: Chlorite dismutase~KEGG: ttj:TTHA1714 putative heme peroxidase gene gene1890 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1843 Afer_1844 Afer_1844 Afer_1844 1928635 1931037 - AAA ATPase central domain protein PFAM: AAA ATPase central domain protein%3B peptidase M41~SMART: AAA ATPase~KEGG: fre:Franean1_1258 ATPase central domain- containing protein gene gene1891 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1844 Afer_1845 Afer_1845 Afer_1845 1931034 1931711 - hypothetical protein gene gene1892 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1845 Afer_1846 Afer_1846 Afer_1846 1931994 1933616 - chaperonin GroEL TIGRFAM: chaperonin GroEL~PFAM: chaperonin Cpn60/TCP-1~KEGG: ace:Acel_0101 chaperonin GroEL gene gene1893 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1846 Afer_1847 Afer_1847 Afer_1847 1933741 1934031 - thiamineS protein PFAM: thiamineS protein~KEGG: hya:HY04AAS1_0115 MoaD family protein gene gene1894 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1847 Afer_1848 Afer_1848 Afer_1848 1934052 1935296 - threonine synthase TIGRFAM: threonine synthase~PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit~KEGG: gvi:gll2062 threonine synthase gene gene1895 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1848 Afer_1849 Afer_1849 Afer_1849 1935485 1936831 + glycosyl transferase family 20 PFAM: glycosyl transferase family 20~KEGG: sco:SCO4290 trehalose-phosphate synthase gene gene1896 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1849 Afer_1850 Afer_1850 Afer_1850 1936828 1937631 + HAD-superfamily hydrolase%2C subfamily IIB TIGRFAM: HAD-superfamily hydrolase%2C subfamily IIB%3B trehalose-phosphatase~PFAM: trehalose-phosphatase~KEGG: saq:Sare_0810 HAD family hydrolase gene gene1897 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1850 Afer_1851 Afer_1851 Afer_1851 1937663 1938151 + transcriptional regulator%2C TetR family PFAM: regulatory protein TetR~KEGG: msm:MSMEG_5282 transcriptional regulator gene gene1898 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1851 Afer_1852 Afer_1852 Afer_1852 1938101 1938688 - hypothetical protein KEGG: mmr:Mmar10_2710 molybdenum cofactor guanylyltransferase gene gene1899 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1852 Afer_1853 Afer_1853 Afer_1853 1938706 1939713 + molybdenum cofactor biosynthesis protein A KEGG: fre:Franean1_3201 molybdenum cofactor biosynthesis protein A~TIGRFAM: molybdenum cofactor biosynthesis protein A~PFAM: molybdenum cofactor synthesis domain protein%3B Radical SAM domain protein~SMART: Elongator protein 3/MiaB/NifB gene gene1900 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1853 Afer_1854 Afer_1854 Afer_1854 1939775 1940266 + molybdenum cofactor biosynthesis protein C TIGRFAM: molybdenum cofactor biosynthesis protein C~PFAM: molybdopterin cofactor biosynthesis MoaC region~KEGG: hmo:HM1_0063 molybdenum cofactor biosynthesis protein C gene gene1901 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1854 Afer_1855 Afer_1855 Afer_1855 1940263 1940676 + hypothetical protein KEGG: lfe:LAF_1457 hypothetical protein gene gene1902 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1855 Afer_1856 Afer_1856 Afer_1856 1941560 1941973 - transcriptional regulator%2C ArsR family PFAM: regulatory protein ArsR~SMART: regulatory protein ArsR~KEGG: stp:Strop_0126 regulatory protein%2C ArsR gene gene1904 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1856 Afer_1857 Afer_1857 Afer_1857 1942381 1943697 + Arsenical pump membrane protein PFAM: Arsenical pump membrane protein%3B Citrate transporter~KEGG: rpa:RPA2258 arsenical pump membrane protein gene gene1905 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1857 Afer_1858 Afer_1858 Afer_1858 1943911 1945311 + pyridine nucleotide-disulphide oxidoreductase dimerization region PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase~KEGG: mab:MAB_4865 putative pyridine nucleotide- disulphide oxidoreductase gene gene1906 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1858 Afer_1859 Afer_1859 Afer_1859 1945777 1947426 + thiamine biosynthesis protein ThiC TIGRFAM: thiamine biosynthesis protein ThiC~PFAM: thiamine biosynthesis protein ThiC~KEGG: fal:FRAAL0800 thiamine biosynthesis protein ThiC gene gene1907 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1859 Afer_1860 Afer_1860 Afer_1860 1947801 1948745 + conserved hypothetical protein KEGG: dau:Daud_1971 hypothetical protein gene gene1908 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1860 Afer_1861 Afer_1861 Afer_1861 1949088 1949360 + hypothetical protein KEGG: saq:Sare_2580 integrase catalytic region gene gene1909 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1861 Afer_1862 Afer_1862 Afer_1862 1949389 1950258 - pseudogene gene1910 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1862 Afer_1863 Afer_1863 Afer_1863 1950258 1950578 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene1911 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1863 Afer_1864 Afer_1864 Afer_1864 1950701 1951513 - IstB domain protein ATP-binding protein PFAM: IstB domain protein ATP-binding protein~SMART: AAA ATPase~KEGG: chy:CHY_1116 ISChy4%2C transposition helper protein gene gene1912 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1864 Afer_1865 Afer_1865 Afer_1865 1951506 1952747 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: chy:CHY_1117 ISChy4%2C transposase gene gene1913 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1865 Afer_1866 Afer_1866 Afer_1866 1952844 1953452 - Type II site-specific deoxyribonuclease PFAM: restriction endonuclease XhoI~KEGG: mbn:Mboo_2338 type II site-specific deoxyribonuclease gene gene1914 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1866 Afer_1867 Afer_1867 Afer_1867 1953495 1953847 - pseudogene gene1915 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1867 Afer_1868 Afer_1868 Afer_1868 1954517 1954951 + PilT protein domain protein PFAM: PilT protein domain protein~SMART: Nucleotide binding protein PINc~KEGG: mta:Moth_2333 hypothetical protein gene gene1916 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1868 Afer_1869 Afer_1869 Afer_1869 1955006 1955395 - single-strand binding protein TIGRFAM: single-strand binding protein~PFAM: single-strand binding protein/Primosomal replication protein n%3B nucleic acid binding OB-fold tRNA/helicase-type~KEGG: dth:DICTH_1248 single-strand DNA-binding protein gene gene1917 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1869 Afer_1870 Afer_1870 Afer_1870 1955629 1955781 - pseudogene gene1918 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1870 Afer_1871 Afer_1871 Afer_1871 1956309 1959158 - protein of unknown function UPF0182 PFAM: protein of unknown function UPF0182~KEGG: pth:PTH_1387 hypothetical protein gene gene1920 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1871 Afer_1872 Afer_1872 Afer_1872 1959171 1961621 - hypothetical protein KEGG: sco:SCO5397 large Ala/Glu-rich protein gene gene1921 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1872 Afer_1873 Afer_1873 Afer_1873 1961630 1962652 - secreted protein containing a PDZ domain KEGG: sen:SACE_1100 PDZ/DHR/GLGF gene gene1922 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1873 Afer_1874 Afer_1874 Afer_1874 1962731 1963396 + class II aldolase/adducin family protein PFAM: class II aldolase/adducin family protein~KEGG: sth:STH188 sugar isomerase gene gene1923 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1874 Afer_1875 Afer_1875 Afer_1875 1963393 1963788 + Carboxymuconolactone decarboxylase PFAM: Carboxymuconolactone decarboxylase~KEGG: mmw:Mmwyl1_1812 alkylhydroperoxidase gene gene1924 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1875 Afer_1876 Afer_1876 Afer_1876 1963763 1964218 + transcriptional regulator%2C MarR family PFAM: regulatory protein MarR~SMART: regulatory protein MarR~KEGG: sen:SACE_7045 MarR family transcriptional regulator gene gene1925 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1876 Afer_1877 Afer_1877 Afer_1877 1964295 1964624 + hypothetical protein gene gene1926 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1877 Afer_1878 Afer_1878 Afer_1878 1964621 1965442 - ABC-2 type transporter PFAM: ABC-2 type transporter~KEGG: fra:Francci3_1473 hypothetical protein gene gene1927 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1878 Afer_1879 Afer_1879 Afer_1879 1965439 1966389 - daunorubicin resistance ABC transporter ATPase subunit KEGG: ace:Acel_0339 daunorubicin resistance ABC transporter ATPase subunit~TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit~PFAM: ABC transporter related~SMART: AAA ATPase gene gene1928 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1879 Afer_1880 Afer_1880 Afer_1880 1966429 1967418 - malate dehydrogenase TIGRFAM: malate dehydrogenase~PFAM: Lactate/malate dehydrogenase~KEGG: lbf:LBF_1102 malate dehydrogenase gene gene1929 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1880 Afer_1881 Afer_1881 Afer_1881 1967432 1968655 - isocitrate dehydrogenase%2C NADP-dependent TIGRFAM: isocitrate dehydrogenase%2C NADP-dependent~PFAM: isocitrate/isopropylmalate dehydrogenase~KEGG: afl:Aflv_0505 isocitrate dehydrogenase gene gene1930 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1881 Afer_1882 Afer_1882 Afer_1882 1968692 1969870 - conserved hypothetical protein KEGG: ace:Acel_0470 hypothetical protein gene gene1931 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1882 Afer_1883 Afer_1883 Afer_1883 1969965 1970663 + hypothetical protein KEGG: mul:MUL_2524 lipase LipV gene gene1932 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1883 Afer_1884 Afer_1884 Afer_1884 1970820 1971314 + molybdopterin biosynthesis MoaE protein PFAM: molybdopterin biosynthesis MoaE protein~KEGG: mem:Memar_1334 molybdopterin biosynthesis MoaE gene gene1933 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1884 Afer_1885 Afer_1885 Afer_1885 1971311 1971517 + hypothetical protein gene gene1934 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1885 Afer_1886 Afer_1886 Afer_1886 1971514 1972494 + actin-like ATPase involved in cell morphogenesis KEGG: cbf:CLI_0218 mbl protein gene gene1935 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1886 Afer_1887 Afer_1887 Afer_1887 1972948 1974684 + hypothetical protein KEGG: cbe:Cbei_2588 collagen triple helix repeat gene gene1936 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1887 Afer_1888 Afer_1888 Afer_1888 1974821 1976602 + hypothetical protein KEGG: art:Arth_4271 hypothetical protein gene gene1937 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1888 Afer_1889 Afer_1889 Afer_1889 1976835 1977084 + pseudogene gene1938 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1889 Afer_1890 Afer_1890 Afer_1890 1977212 1978170 - pseudogene gene1939 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1890 Afer_1891 Afer_1891 Afer_1891 1978285 1978479 - pseudogene gene1940 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1891 Afer_1892 Afer_1892 Afer_1892 1978503 1982113 + pseudogene gene1941 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1892 Afer_1893 Afer_1893 Afer_1893 1979035 1979904 - pseudogene gene1942 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1893 Afer_1894 Afer_1894 Afer_1894 1979904 1980224 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mva:Mvan_5059 transposase IS3/IS911 family protein gene gene1943 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1894 Afer_1895 Afer_1895 Afer_1895 1980436 1981726 + pseudogene gene1944 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1895 Afer_1896 Afer_1896 Afer_1896 1982271 1982924 - PBS lyase HEAT domain protein repeat-containing protein PFAM: PBS lyase HEAT domain protein repeat- containing protein~KEGG: rrs:RoseRS_1736 heat repeat-containing PBS lyase gene gene1945 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1896 Afer_1897 Afer_1897 Afer_1897 1982969 1984483 - permease for cytosine/purines uracil thiamine allantoin PFAM: permease for cytosine/purines uracil thiamine allantoin~KEGG: rha:RHA1_ro01635 permease for cytosine/purines%2C uracil%2C thiamine%2C allantoin gene gene1946 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1897 Afer_1898 Afer_1898 Afer_1898 1984538 1986109 - Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase~KEGG: pmy:Pmen_4599 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase gene gene1947 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1898 Afer_1899 Afer_1899 Afer_1899 1986121 1986876 - RNA methyltransferase%2C TrmH family%2C group 3 TIGRFAM: RNA methyltransferase%2C TrmH family%2C group 3~PFAM: tRNA/rRNA methyltransferase (SpoU)%3B RNA 2-O ribose methyltransferase substrate binding~KEGG: gur:Gura_2796 RNA methyltransferase gene gene1948 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1899 Afer_1900 Afer_1900 Afer_1900 1986863 1987957 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KEGG: lxx:Lxx18250 2-C-methyl-D-erythritol 2%2C4- cyclodiphosphate synthase~TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase%3B 2C-methyl-D-erythritol 2%2C4- cyclodiphosphate synthase~PFAM: MECDP-synthase%3B 4-diphosphocytidyl-2C-methyl- D-erythritol synthase gene gene1949 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1900 Afer_1901 Afer_1901 Afer_1901 1987964 1988443 - transcriptional regulator%2C CarD family PFAM: transcription factor CarD~KEGG: mjl:Mjls_5126 CarD family transcriptional regulator gene gene1950 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1901 Afer_1902 Afer_1902 Afer_1902 1988541 1989611 - protein of unknown function DUF147 PFAM: protein of unknown function DUF147~KEGG: stp:Strop_4270 DNA integrity scanning protein DisA gene gene1951 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1902 Afer_1903 Afer_1903 Afer_1903 1989702 1992191 - ATPase AAA-2 domain protein PFAM: ATPase AAA-2 domain protein%3B AAA ATPase central domain protein%3B ATPase associated with various cellular activities AAA_5%3B Clp domain protein~SMART: AAA ATPase~KEGG: fal:FRAAL6680 ATP-dependent protease%2C HSP 100%2C part of multi-chaperone system with DnaK%2C DnaJ%2C and GrpE gene gene1952 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1903 Afer_1904 Afer_1904 Afer_1904 1992408 1994294 - hypothetical protein KEGG: fre:Franean1_6445 hypothetical protein gene gene1953 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1904 Afer_1905 Afer_1905 Afer_1905 1994391 1995407 + Polyprenyl synthetase PFAM: Polyprenyl synthetase~KEGG: sma:SAV_4864 polyprenyl diphosphate synthase gene gene1954 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1905 Afer_1906 Afer_1906 Afer_1906 1995658 1997154 - lysyl-tRNA synthetase TIGRFAM: lysyl-tRNA synthetase~PFAM: tRNA synthetase class II (D K and N)%3B tRNA synthetase class II (G H P and S)%3B nucleic acid binding OB- fold tRNA/helicase-type~KEGG: cya:CYA_0333 lysyl-tRNA synthetase gene gene1955 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1906 Afer_1907 Afer_1907 Afer_1907 1997194 1998006 - putative transcriptional acitvator%2C Baf family TIGRFAM: transcriptional activator%2C Baf family~PFAM: Bvg accessory factor~KEGG: mta:Moth_0146 pantothenate kinase gene gene1956 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1907 Afer_1908 Afer_1908 Afer_1908 1997999 1998844 - pantoate/beta-alanine ligase KEGG: rsh:Rsph17029_0403 pantoate--beta-alanine ligase~TIGRFAM: pantoate/beta-alanine ligase~PFAM: Pantoate-beta-alanine ligase gene gene1957 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1908 Afer_1909 Afer_1909 Afer_1909 1998832 1999317 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin epyrophosphokinase TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase~PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK~KEGG: dra:DR_0170 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase gene gene1958 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1909 Afer_1910 Afer_1910 Afer_1910 1999314 1999691 - dihydroneopterin aldolase PFAM: dihydroneopterin aldolase~KEGG: rxy:Rxyl_2579 dihydroneopterin aldolase gene gene1959 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1910 Afer_1911 Afer_1911 Afer_1911 1999682 2000488 - dihydropteroate synthase KEGG: mmr:Mmar10_2410 dihydropteroate synthase~TIGRFAM: dihydropteroate synthase~PFAM: dihydropteroate synthase DHPS gene gene1960 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1911 Afer_1912 Afer_1912 Afer_1912 2000485 2001057 - GTP cyclohydrolase I PFAM: GTP cyclohydrolase I~KEGG: paa:Paes_0859 GTP cyclohydrolase I gene gene1961 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1912 Afer_1913 Afer_1913 Afer_1913 2001054 2001599 - hypoxanthine phosphoribosyltransferase KEGG: fre:Franean1_0299 hypoxanthine phosphoribosyltransferase~TIGRFAM: hypoxanthine phosphoribosyltransferase~PFAM: phosphoribosyltransferase gene gene1962 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1913 Afer_1914 Afer_1914 Afer_1914 2001596 2002516 - tRNA(Ile)-lysidine synthetase TIGRFAM: tRNA(Ile)-lysidine synthetase~PFAM: PP-loop domain protein~KEGG: nfa:nfa3880 hypothetical protein gene gene1963 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1914 Afer_1915 Afer_1915 Afer_1915 2002506 2003483 - conserved hypothetical protein KEGG: kra:Krad_0528 hypothetical protein gene gene1964 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1915 Afer_1916 Afer_1916 Afer_1916 2003503 2003700 - hypothetical protein gene gene1965 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1916 Afer_1917 Afer_1917 Afer_1917 2003730 2004062 - anti-sigma factor TIGRFAM: anti-sigma factor~KEGG: saq:Sare_4094 anti-sigma factor RshA gene gene1966 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1917 Afer_1918 Afer_1918 Afer_1918 2004063 2004638 - RNA polymerase%2C sigma-24 subunit%2C ECF subfamily TIGRFAM: RNA polymerase sigma factor%2C sigma-70 family~PFAM: sigma-70 region 2 domain protein%3B Sigma-70 region 4 type 2%3B sigma-70 region 4 domain protein~KEGG: ace:Acel_0538 ECF subfamily RNA polymerase sigma-24 factor gene gene1967 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1918 Afer_1919 Afer_1919 Afer_1919 2004948 2005622 - pseudogene gene1969 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1919 Afer_1920 Afer_1920 Afer_1920 2005603 2006187 - thymidylate kinase KEGG: xau:Xaut_4325 dTMP kinase~TIGRFAM: thymidylate kinase~PFAM: thymidylate kinase gene gene1970 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1920 Afer_1921 Afer_1921 Afer_1921 2006202 2008754 - DNA topoisomerase I KEGG: fra:Francci3_4305 DNA topoisomerase I~TIGRFAM: DNA topoisomerase I~PFAM: DNA topoisomerase type IA central domain protein%3B TOPRIM domain protein~SMART: DNA topoisomerase I DNA-binding%3B DNA topoisomerase I ATP-binding%3B Toprim sub domain protein gene gene1971 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1921 Afer_1922 Afer_1922 Afer_1922 2008773 2011106 - nucleic acid binding OB-fold tRNA/helicase-type PFAM: nucleic acid binding OB-fold tRNA/helicase- type%3B amino acid permease-associated region~KEGG: ace:Acel_1194 nucleic acid binding%2C OB-fold%2C tRNA/helicase-type gene gene1972 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1922 Afer_1923 Afer_1923 Afer_1923 2011277 2011939 + TrkA-N domain protein PFAM: TrkA-N domain protein~KEGG: sgr:SGR_1656 putative potassium transporter gene gene1973 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1923 Afer_1924 Afer_1924 Afer_1924 2011944 2012639 + TrkA-N domain protein PFAM: TrkA-N domain protein%3B TrkA-C domain protein~KEGG: fre:Franean1_5192 TrkA domain-containing protein gene gene1974 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1924 Afer_1925 Afer_1925 Afer_1925 2012691 2013512 + HAD-superfamily subfamily IB hydrolase%2C TIGR01490 TIGRFAM: HAD-superfamily subfamily IB hydrolase%2C TIGR01490%3B HAD-superfamily hydrolase%2C subfamily IB (PSPase-like)~PFAM: Haloacid dehalogenase domain protein hydrolase~KEGG: stp:Strop_4041 HAD family hydrolase gene gene1975 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1925 Afer_1926 Afer_1926 Afer_1926 2013946 2015577 + hypothetical protein KEGG: sma:SAV_74 hypothetical protein gene gene1976 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1926 Afer_1927 Afer_1927 Afer_1927 2016887 2017720 - protein of unknown function DUF6 transmembrane PFAM: protein of unknown function DUF6 transmembrane~KEGG: msm:MSMEG_2639 integral membrane protein gene gene1977 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1927 Afer_1928 Afer_1928 Afer_1928 2017783 2018580 + Extradiol ring-cleavage dioxygenase class III protein subunit B PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B~KEGG: nfa:nfa43360 hypothetical protein gene gene1978 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1928 Afer_1929 Afer_1929 Afer_1929 2018698 2020341 + hypothetical protein KEGG: aba:Acid345_0662 parallel beta-helix repeat protein gene gene1979 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1929 Afer_1930 Afer_1930 Afer_1930 2020457 2020957 - hypothetical protein KEGG: rrs:RoseRS_3572 hypothetical protein gene gene1980 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1930 Afer_1931 Afer_1931 Afer_1931 2021012 2022070 - transcriptional regulator of molybdate metabolism%2C XRE family PFAM: helix-turn-helix domain protein~SMART: helix-turn-helix domain protein~KEGG: scl:sce1136 putative regulator of molybdate uptake gene gene1981 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1931 Afer_1932 Afer_1932 Afer_1932 2022067 2023005 - ABC transporter related PFAM: ABC transporter related~SMART: AAA ATPase~KEGG: cms:CMS_2522 putative ABC transporter ATP- binding subunit gene gene1982 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1932 Afer_1933 Afer_1933 Afer_1933 2022992 2023810 - binding-protein-dependent transport systems inner membrane component PFAM: binding-protein-dependent transport systems inner membrane component~KEGG: bvi:Bcep1808_7295 tungstate/molybdate transport system permease protein gene gene1983 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1933 Afer_1934 Afer_1934 Afer_1934 2023773 2024726 - tungstate/molybdate binding protein KEGG: bvi:Bcep1808_7294 tungstate/molybdate binding protein gene gene1984 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1934 Afer_1935 Afer_1935 Afer_1935 2024874 2026025 + aminotransferase class I and II PFAM: aminotransferase class I and II%3B aromatic amino acid beta-eliminating lyase/threonine aldolase~KEGG: sgr:SGR_3424 putative aminotransferase gene gene1985 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1935 Afer_1936 Afer_1936 Afer_1936 2026080 2026679 - Methyltransferase type 11 PFAM: Methyltransferase type 11%3B Tellurite resistance methyltransferase%2C TehB%2C core%3B Methyltransferase type 12~KEGG: ace:Acel_0489 methyltransferase type 12 gene gene1986 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1936 Afer_1937 Afer_1937 Afer_1937 2026747 2027874 + metallophosphoesterase PFAM: metallophosphoesterase~KEGG: mbo:Mb1308 hypothetical protein gene gene1987 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1937 Afer_1938 Afer_1938 Afer_1938 2027871 2030711 + SMC domain protein PFAM: SMC domain protein~KEGG: mab:MAB_1421 hypothetical protein gene gene1988 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1938 Afer_1939 Afer_1939 Afer_1939 2031298 2032554 - UDP-sulfoquinovose synthase PFAM: NAD-dependent epimerase/dehydratase~KEGG: rrs:RoseRS_0861 NAD-dependent epimerase/dehydratase gene gene1989 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1939 Afer_1940 Afer_1940 Afer_1940 2032804 2033913 + cysteinyl-tRNA synthetase-like protein KEGG: ace:Acel_2052 cysteinyl-tRNA synthetase-like gene gene1990 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1940 Afer_1941 Afer_1941 Afer_1941 2034719 2035588 + PHP domain protein PFAM: PHP domain protein~SMART: phosphoesterase PHP domain protein~KEGG: chy:CHY_2227 phosphotransferase domain- containing protein gene gene1992 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1941 Afer_1942 Afer_1942 Afer_1942 2036028 2037464 + amidophosphoribosyltransferase TIGRFAM: amidophosphoribosyltransferase~PFAM: glutamine amidotransferase class-II%3B phosphoribosyltransferase~KEGG: fal:FRAAL0128 amidophosphoribosyltransferase gene gene1995 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1942 Afer_1943 Afer_1943 Afer_1943 2037552 2038580 + phosphoribosylformylglycinamidine cyclo-ligase KEGG: aeh:Mlg_0516 phosphoribosylformylglycinamidine cyclo-ligase~TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase~PFAM: AIR synthase related protein%3B AIR synthase related protein domain protein gene gene1996 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1943 Afer_1944 Afer_1944 Afer_1944 2038556 2039116 + orotate phosphoribosyltransferase TIGRFAM: orotate phosphoribosyltransferase~KEGG: cms:CMS_0233 orotate phosphoribosyltransferase gene gene1997 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1944 Afer_1945 Afer_1945 Afer_1945 2039162 2040082 + hypothetical protein KEGG: spw:SPCG_1750 cell wall surface anchor family protein gene gene1998 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1945 Afer_1946 Afer_1946 Afer_1946 2040357 2041364 - type IV pilus assembly PilZ PFAM: type IV pilus assembly PilZ gene gene1999 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1946 Afer_1947 Afer_1947 Afer_1947 2041370 2042782 - Malate dehydrogenase (oxaloacetate- decarboxylating) PFAM: malic protein NAD-binding%3B amino acid-binding ACT domain protein%3B malic protein domain protein%3B UBA/THIF- type NAD/FAD binding protein~KEGG: rxy:Rxyl_1110 malate dehydrogenase (oxaloacetate decarboxylating) gene gene2000 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1947 Afer_1948 Afer_1948 Afer_1948 2042827 2044137 + hypothetical protein KEGG: fal:FRAAL1199 putative phosphomannomutase gene gene2001 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1948 Afer_1949 Afer_1949 Afer_1949 2044208 2046046 + General secretory system II protein E domain protein PFAM: General secretory system II protein E domain protein%3B glycosyl transferase family 2~KEGG: ttj:TTHA0743 glycosyltransferase related protein gene gene2002 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1949 Afer_1950 Afer_1950 Afer_1950 2046043 2046963 + conserved hypothetical protein KEGG: ret:RHE_CH02708 hypothetical protein gene gene2003 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1950 Afer_1951 Afer_1951 Afer_1951 2046960 2047391 - hypothetical protein gene gene2004 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1951 Afer_1952 Afer_1952 Afer_1952 2047971 2050175 + phosphoribosylformylglycinamidine synthase II KEGG: mta:Moth_2048 phosphoribosylformylglycinamidine synthase II~TIGRFAM: phosphoribosylformylglycinamidine synthase II~PFAM: AIR synthase related protein domain protein%3B AIR synthase related protein gene gene2005 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1952 Afer_1953 Afer_1953 Afer_1953 2050172 2050825 - phosphoribosylformylglycinamidine synthase I KEGG: rxy:Rxyl_0995 phosphoribosylformylglycinamidine synthase subunit I~TIGRFAM: phosphoribosylformylglycinamidine synthase I~PFAM: CobB/CobQ domain protein glutamine amidotransferase gene gene2006 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1953 Afer_1954 Afer_1954 Afer_1954 2050822 2051091 - phosphoribosylformylglycinamidine synthase%2C purS TIGRFAM: phosphoribosylformylglycinamidine synthase%2C purS~KEGG: syg:sync_1700 phosphoribosylformylglycinamidine synthase%2C PurS protein gene gene2007 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1954 Afer_1955 Afer_1955 Afer_1955 2051088 2051966 - phosphoribosylaminoimidazolesuccinocarboxamide synthase PFAM: SAICAR synthetase~KEGG: mva:Mvan_5138 phosphoribosylaminoimidazole- succinocarboxamide synthase gene gene2008 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1955 Afer_1956 Afer_1956 Afer_1956 2051963 2053267 - adenylosuccinate lyase TIGRFAM: adenylosuccinate lyase~PFAM: fumarate lyase~KEGG: tth:TTC1149 putative adenylosuccinate lyase protein gene gene2009 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1956 Afer_1957 Afer_1957 Afer_1957 2053365 2054591 - phosphoribosylamine/glycine ligase KEGG: fra:Francci3_4370 phosphoribosylamine-- glycine ligase~TIGRFAM: phosphoribosylamine/glycine ligase~PFAM: phosphoribosylglycinamide synthetase%3B ATP- dependent carboxylate-amine ligase domain protein ATP- grasp gene gene2010 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1957 Afer_1958 Afer_1958 Afer_1958 2054597 2055874 - adenylosuccinate synthetase KEGG: fal:FRAAL6660 adenylosuccinate synthetase~TIGRFAM: adenylosuccinate synthetase~PFAM: adenylosuccinate synthetase~SMART: adenylosuccinate synthetase gene gene2011 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1958 Afer_1959 Afer_1959 Afer_1959 2055907 2056560 - phosphoglycerate mutase 1 family KEGG: cur:cur_0215 phosphoglycerate mutase~TIGRFAM: phosphoglycerate mutase 1 family~PFAM: Phosphoglycerate mutase gene gene2012 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1959 Afer_1960 Afer_1960 Afer_1960 2056798 2058639 + chaperone protein DnaK KEGG: ace:Acel_2115 molecular chaperone DnaK~TIGRFAM: chaperone protein DnaK~PFAM: Heat shock protein 70 gene gene2013 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1960 Afer_1961 Afer_1961 Afer_1961 2058643 2059260 + GrpE protein PFAM: GrpE protein~KEGG: ace:Acel_2116 GrpE protein gene gene2014 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1961 Afer_1962 Afer_1962 Afer_1962 2059315 2060400 + chaperone protein DnaJ KEGG: ace:Acel_2117 chaperone protein DnaJ~TIGRFAM: chaperone protein DnaJ~PFAM: chaperone DnaJ domain protein%3B DnaJ central domain protein%3B heat shock protein DnaJ domain protein~SMART: heat shock protein DnaJ domain protein gene gene2015 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1962 Afer_1963 Afer_1963 Afer_1963 2060429 2060845 + transcriptional regulator%2C MerR family PFAM: regulatory protein MerR~SMART: regulatory protein MerR~KEGG: sen:SACE_7207 heat shock regulator gene gene2016 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1963 Afer_1964 Afer_1964 Afer_1964 2060927 2063413 + ATP-dependent chaperone ClpB KEGG: nfa:nfa54020 putative Clp protease ATP- binding subunit~TIGRFAM: ATP-dependent chaperone ClpB~PFAM: ATPase AAA-2 domain protein%3B AAA ATPase central domain protein%3B ATPase associated with various cellular activities AAA_5%3B Clp domain protein~SMART: AAA ATPase gene gene2017 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1964 Afer_1965 Afer_1965 Afer_1965 2063460 2064635 - amidohydrolase 2 PFAM: amidohydrolase 2~KEGG: sen:SACE_3096 amidohydrolase 2 gene gene2018 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1965 Afer_1966 Afer_1966 Afer_1966 2064632 2065471 - transcriptional regulator%2C RpiR family PFAM: sugar isomerase (SIS)~KEGG: bbt:BBta_3194 RpiR family transcriptional regulator gene gene2019 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1966 Afer_1967 Afer_1967 Afer_1967 2065468 2066835 - glutamine synthetase catalytic region PFAM: glutamine synthetase catalytic region~KEGG: fra:Francci3_0315 L-glutamine synthetase gene gene2020 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1967 Afer_1968 Afer_1968 Afer_1968 2066979 2068466 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: mva:Mvan_2919 amino acid permease-associated region gene gene2021 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1968 Afer_1969 Afer_1969 Afer_1969 2068560 2070023 + amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: acr:Acry_0648 amino acid permease-associated region gene gene2022 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1969 Afer_1970 Afer_1970 Afer_1970 2070025 2071053 + Acetamidase/Formamidase PFAM: Acetamidase/Formamidase~KEGG: mva:Mvan_0644 acetamidase/formamidase gene gene2023 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1970 Afer_1971 Afer_1971 Afer_1971 2071341 2074595 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: mpo:Mpop_1840 glycosyl transferase family 2 gene gene2024 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1971 Afer_1972 Afer_1972 Afer_1972 2075118 2075915 - pseudogene gene2025 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1972 Afer_1973 Afer_1973 Afer_1973 2075991 2076323 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: rxy:Rxyl_2226 transposase IS3/IS911 gene gene2026 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1973 Afer_1974 Afer_1974 Afer_1974 2076556 2079117 + glycosyl transferase family 2 PFAM: glycosyl transferase family 2~KEGG: met:M446_0315 glycosyl transferase family protein gene gene2027 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1974 Afer_1975 Afer_1975 Afer_1975 2079503 2081794 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: jan:Jann_4283 glycosyl transferase%2C group 1 gene gene2028 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1975 Afer_1976 Afer_1976 Afer_1976 2081796 2083421 - glycosyl transferase group 1 PFAM: glycosyl transferase group 1~KEGG: pap:PSPA7_6239 glycosyltransferase WbpX gene gene2029 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1976 Afer_1977 Afer_1977 Afer_1977 2083700 2085667 - hypothetical protein KEGG: aba:Acid345_3948 NHL repeat protein gene gene2030 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1977 Afer_1978 Afer_1978 Afer_1978 2085882 2087294 - NAD(P)(+) transhydrogenase (AB-specific) PFAM: NAD(P) transhydrogenase beta subunit~KEGG: art:Arth_4084 NAD(P) transhydrogenase%2C beta subunit gene gene2031 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1978 Afer_1979 Afer_1979 Afer_1979 2087291 2087584 - NAD/NADP transhydrogenase alpha subunit-like protein KEGG: ace:Acel_2021 NAD/NADP transhydrogenase alpha subunit-like gene gene2032 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1979 Afer_1980 Afer_1980 Afer_1980 2087614 2088711 - alanine dehydrogenase/PNT domain protein PFAM: alanine dehydrogenase/PNT domain protein~KEGG: ade:Adeh_3005 alanine dehydrogenase/PNT-like protein gene gene2033 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1980 Afer_1981 Afer_1981 Afer_1981 2088763 2089431 - two component transcriptional regulator%2C LuxR family PFAM: response regulator receiver%3B regulatory protein LuxR%3B Bacterio-opsin activator HTH domain protein~SMART: regulatory protein LuxR%3B response regulator receiver~KEGG: cms:CMS_0994 putative two-component system response regulator gene gene2034 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1981 Afer_1982 Afer_1982 Afer_1982 2089419 2090699 - putative signal transduction histidine kinase PFAM: ATP-binding region ATPase domain protein~KEGG: kra:Krad_1351 integral membrane sensor signal transduction histidine kinase gene gene2035 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1982 Afer_1983 Afer_1983 Afer_1983 2090776 2092131 + aminotransferase class-III PFAM: aminotransferase class-III~KEGG: nca:Noca_3921 aminotransferase gene gene2036 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1983 Afer_1984 Afer_1984 Afer_1984 2092133 2093584 - isocitrate dehydrogenase KEGG: rce:RC1_0906 isocitrate dehydrogenase~TIGRFAM: isocitrate dehydrogenase~PFAM: isocitrate/isopropylmalate dehydrogenase gene gene2037 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1984 Afer_1985 Afer_1985 Afer_1985 2093812 2094228 + hypothetical protein KEGG: sen:SACE_3654 hypothetical protein gene gene2038 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1985 Afer_1986 Afer_1986 Afer_1986 2094200 2096026 - Ig family protein PFAM: Ig family protein~KEGG: sus:Acid_0470 Ig family protein gene gene2039 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1986 Afer_1987 Afer_1987 Afer_1987 2096121 2097578 - glutamate synthase%2C NADH/NADPH%2C small subunit TIGRFAM: glutamate synthase%2C NADH/NADPH%2C small subunit~PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase~KEGG: mkm:Mkms_5153 glutamate synthase subunit beta gene gene2040 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1987 Afer_1988 Afer_1988 Afer_1988 2097644 2102137 - Glutamate synthase (ferredoxin) PFAM: ferredoxin-dependent glutamate synthase%3B glutamate synthase alpha subunit domain protein%3B glutamate synthase%3B glutamine amidotransferase class-II~KEGG: ace:Acel_1078 glutamate synthase (NADH) large subunit gene gene2041 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1988 Afer_1989 Afer_1989 Afer_1989 2102212 2102625 - conserved hypothetical protein KEGG: ace:Acel_0502 hypothetical protein gene gene2042 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1989 Afer_1990 Afer_1990 Afer_1990 2102808 2104004 + Colicin V production protein PFAM: Colicin V production protein%3B peptidase S1 and S6 chymotrypsin/Hap~KEGG: ace:Acel_1988 peptidase S1 and S6%2C chymotrypsin/Hap gene gene2043 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1990 Afer_1991 Afer_1991 Afer_1991 2104102 2105034 + beta-lactamase domain protein PFAM: beta-lactamase domain protein~KEGG: tfu:Tfu_2040 Zn-dependent hydrolase gene gene2044 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1991 Afer_1992 Afer_1992 Afer_1992 2105031 2106215 + amidohydrolase KEGG: nar:Saro_2348 peptidase M20D%2C amidohydrolase~TIGRFAM: amidohydrolase~PFAM: peptidase M20%3B peptidase dimerization domain protein gene gene2045 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1992 Afer_1993 Afer_1993 Afer_1993 2106212 2107651 + protein of unknown function DUF195 PFAM: protein of unknown function DUF195~KEGG: psa:PST_2781 hypothetical protein gene gene2046 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1993 Afer_1994 Afer_1994 Afer_1994 2107648 2108508 + 3-mercaptopyruvate sulfurtransferase KEGG: tfu:Tfu_0354 3-mercaptopyruvate sulfurtransferase~PFAM: Rhodanese domain protein~SMART: Rhodanese domain protein gene gene2047 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1994 Afer_1995 Afer_1995 Afer_1995 2108845 2110290 + ammonium transporter TIGRFAM: ammonium transporter~PFAM: Rh family protein/ammonium transporter~KEGG: afe:Lferr_2531 ammonium transporter gene gene2048 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1995 Afer_1996 Afer_1996 Afer_1996 2110440 2111162 + Rhodanese domain protein SMART: Rhodanese domain protein~KEGG: mpa:MAP2046 SseB gene gene2049 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1996 Afer_1997 Afer_1997 Afer_1997 2111775 2112827 + ribonuclease BN PFAM: ribonuclease BN~KEGG: ace:Acel_1654 ribonuclease BN gene gene2050 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1997 Afer_1998 Afer_1998 Afer_1998 2113276 2114441 + pseudogene gene2051 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1998 Afer_1999 Afer_1999 Afer_1999 2114775 2115791 - hypothetical protein KEGG: art:Arth_4396 hypothetical protein gene gene2052 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_1999 Afer_2000 Afer_2000 Afer_2000 2115940 2117583 - amino acid permease-associated region PFAM: amino acid permease-associated region~KEGG: msm:MSMEG_6701 amino acid permease gene gene2053 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2000 Afer_2001 Afer_2001 Afer_2001 2117776 2118048 - hypothetical protein gene gene2054 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2001 Afer_2002 Afer_2002 Afer_2002 2118045 2119559 - FAD linked oxidase domain protein PFAM: FAD linked oxidase domain protein~KEGG: pth:PTH_2230 FAD/FMN-containing dehydrogenases gene gene2055 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2002 Afer_2003 Afer_2003 Afer_2003 2119556 2120794 - protein of unknown function DUF224 cysteine-rich region domain protein PFAM: protein of unknown function DUF224 cysteine- rich region domain protein~KEGG: afu:AF0506 iron-sulfur binding reductase gene gene2056 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2003 Afer_2004 Afer_2004 Afer_2004 2120900 2121637 + regulatory protein GntR HTH PFAM: regulatory protein GntR HTH~SMART: regulatory protein GntR HTH~KEGG: msm:MSMEG_6700 regulatory protein gene gene2057 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2004 Afer_2005 Afer_2005 Afer_2005 2121634 2122296 + conserved hypothetical protein KEGG: mva:Mvan_1847 hypothetical protein gene gene2058 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2005 Afer_2006 Afer_2006 Afer_2006 2122293 2125877 - cellulose-binding family II PFAM: cellulose-binding family II%3B glycoside hydrolase family 5~SMART: cellulose-binding family II~KEGG: bte:BTH_I2402 glycosy hydrolase family protein gene gene2059 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2006 Afer_2007 Afer_2007 Afer_2007 2126001 2127155 - CRISPR-associated protein%2C NE0113 family TIGRFAM: CRISPR-associated protein%2C NE0113 family~KEGG: neu:NE0113 hypothetical protein gene gene2060 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2007 Afer_2008 Afer_2008 Afer_2008 2127470 2127916 - transcriptional regulator%2C MerR family PFAM: Transcription regulator MerR DNA binding%3B regulatory protein MerR~SMART: regulatory protein MerR~KEGG: nca:Noca_1646 MerR family transcriptional regulator gene gene2061 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2008 Afer_2009 Afer_2009 Afer_2009 2128009 2129424 + pyridine nucleotide-disulphide oxidoreductase dimerization region PFAM: pyridine nucleotide-disulphide oxidoreductase dimerization region%3B FAD-dependent pyridine nucleotide- disulphide oxidoreductase~KEGG: ace:Acel_0690 mercuric reductase gene gene2062 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2009 Afer_2010 Afer_2010 Afer_2010 2129668 2130090 - conserved hypothetical protein KEGG: cms:CMS_2164 hypothetical protein gene gene2063 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2010 Afer_2011 Afer_2011 Afer_2011 2130157 2130372 - hypothetical protein gene gene2064 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2011 Afer_2012 Afer_2012 Afer_2012 2130796 2132304 + deoxyribodipyrimidine photolyase-related protein PFAM: deoxyribodipyrimidine photolyase-related protein%3B DNA photolyase FAD-binding~KEGG: cyb:CYB_1949 deoxyribodipyrimidine photolyase family protein gene gene2065 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2012 Afer_2013 Afer_2013 Afer_2013 2132643 2132792 + pseudogene gene2066 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2013 Afer_2014 Afer_2014 Afer_2014 2133070 2133963 - Integrase catalytic region PFAM: Integrase catalytic region~KEGG: mva:Mvan_1111 integrase catalytic subunit gene gene2067 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2014 Afer_2015 Afer_2015 Afer_2015 2134014 2134292 - transposase IS3/IS911 family protein PFAM: transposase IS3/IS911 family protein~KEGG: mjl:Mjls_4451 transposase IS3/IS911 family protein gene gene2068 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2015 Afer_2016 Afer_2016 Afer_2016 2134353 2134691 - conserved hypothetical protein KEGG: mbb:BCG_0673 hypothetical protein gene gene2069 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2016 Afer_2017 Afer_2017 Afer_2017 2134688 2134915 - conserved hypothetical protein KEGG: mpa:MAP2028c hypothetical protein gene gene2070 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2017 Afer_2018 Afer_2018 Afer_2018 2135403 2135873 - CMP/dCMP deaminase zinc-binding PFAM: CMP/dCMP deaminase zinc-binding~KEGG: vei:Veis_2620 CMP/dCMP deaminase%2C zinc- binding gene gene2073 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2018 Afer_2019 Afer_2019 Afer_2019 2135860 2136243 - conserved hypothetical protein involved in tolerance to divalent cations KEGG: spl:Spea_0584 CutA1 divalent ion tolerance protein gene gene2074 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2019 Afer_2020 Afer_2020 Afer_2020 2137295 2137657 - hypothetical protein gene gene2076 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2020 Afer_2021 Afer_2021 Afer_2021 2137654 2138517 - Extradiol ring-cleavage dioxygenase class III protein subunit B PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B~KEGG: pas:Pars_0521 extradiol ring-cleavage dioxygenase III subunit B gene gene2077 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2021 Afer_2022 Afer_2022 Afer_2022 2138539 2139342 - citrate synthase KEGG: msm:MSMEG_4035 citrate synthase gene gene2078 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2022 Afer_2023 Afer_2023 Afer_2023 2139339 2140523 - L-carnitine dehydratase/bile acid-inducible protein F PFAM: L-carnitine dehydratase/bile acid-inducible protein F~KEGG: krh:KRH_05070 L-carnitine dehydratase/bile acid-inducible protein F family protein gene gene2079 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2023 Afer_2024 Afer_2024 Afer_2024 2140632 2141477 - transcriptional regulator%2C IclR family PFAM: regulatory protein IclR%3B Transcriptional regulator IclR~SMART: regulatory protein IclR~KEGG: cgt:cgR_2273 hypothetical protein gene gene2080 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2024 Afer_2025 Afer_2025 Afer_2025 2141653 2143167 + amidohydrolase PFAM: amidohydrolase%3B Amidohydrolase 3~KEGG: rxy:Rxyl_0206 hypothetical protein gene gene2081 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2025 Afer_2026 Afer_2026 Afer_2026 2143594 2144061 + conserved hypothetical protein KEGG: sma:SAV_6532 hypothetical protein gene gene2082 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2026 Afer_2027 Afer_2027 Afer_2027 2144096 2145616 + major facilitator superfamily MFS_1 PFAM: major facilitator superfamily MFS_1~KEGG: ace:Acel_1673 EmrB/QacA family drug resistance transporter gene gene2083 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2027 Afer_2028 Afer_2028 Afer_2028 2145675 2145911 - hypothetical protein KEGG: GI22175 gene product from transcript GI22175- RA gene gene2084 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2028 Afer_2029 Afer_2029 Afer_2029 2146066 2149758 - ABC transporter related PFAM: ABC transporter related%3B ABC transporter transmembrane region~SMART: AAA ATPase~KEGG: kra:Krad_1516 ABC transporter-related protein gene gene2085 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2029 Afer_2030 Afer_2030 Afer_2030 2150078 2150998 - parB-like partition protein KEGG: ace:Acel_2154 chromosome segregation DNA- binding protein~TIGRFAM: parB-like partition protein~PFAM: ParB domain protein nuclease~SMART: ParB domain protein nuclease gene gene2086 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2030 Afer_2031 Afer_2031 Afer_2031 2150991 2151752 - Cobyrinic acid ac-diamide synthase PFAM: Cobyrinic acid ac-diamide synthase~KEGG: cth:Cthe_2377 chromosome segregation ATPase gene gene2087 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2031 Afer_2032 Afer_2032 Afer_2032 2152455 2153981 - transposase IS4 family protein PFAM: transposase IS4 family protein~KEGG: mgi:Mflv_2204 transposase%2C IS4 family protein gene gene2088 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2032 Afer_2033 Afer_2033 Afer_2033 2154799 2155455 - glucose inhibited division protein PFAM: glucose inhibited division protein~KEGG: similar to glucose inhibited division protein B (gidB)%3B K03501 glucose inhibited division protein B gene gene2089 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2033 Afer_2034 Afer_2034 Afer_2034 2155430 2156275 - single-stranded nucleic acid binding R3H domain protein PFAM: single-stranded nucleic acid binding R3H domain protein~SMART: single-stranded nucleic acid binding R3H domain protein~KEGG: efa:EF3330 jag protein%2C putative gene gene2090 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2034 Afer_2035 Afer_2035 Afer_2035 2156307 2157317 - 60 kDa inner membrane insertion protein PFAM: 60 kDa inner membrane insertion protein~KEGG: rrs:RoseRS_3965 60 kDa inner membrane insertion protein gene gene2091 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2035 Afer_2036 Afer_2036 Afer_2036 2157314 2157580 - protein of unknown function DUF37 PFAM: protein of unknown function DUF37~KEGG: abb:ABBFA_003529 hypothetical protein gene gene2092 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2036 Afer_2037 Afer_2037 Afer_2037 2157577 2157930 - ribonuclease P protein KEGG: rec:RHECIAT_CH0000479 ribonuclease P protein gene gene2093 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2037 Afer_2038 Afer_2038 Afer_2038 2157931 2158065 - ribosomal protein L34 TIGRFAM: ribosomal protein L34~PFAM: ribosomal protein L34~KEGG: fra:Francci3_4548 50S ribosomal protein L34 gene gene2094 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_2038 Afer_R0001 Afer_R0001 Afer_R0001 34016 34092 + tRNA-Ile tRNA-Ile1 tRNA gene32 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0001 Afer_R0002 Afer_R0002 Afer_R0002 51268 51341 + tRNA-Gly tRNA-Gly1 tRNA gene53 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0002 Afer_R0003 Afer_R0003 Afer_R0003 96722 96808 + tRNA-Leu tRNA-Leu1 tRNA gene94 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0003 Afer_R0004 Afer_R0004 Afer_R0004 99756 99847 - tRNA-Ser tRNA-Ser4 tRNA gene97 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0004 Afer_R0005 Afer_R0005 Afer_R0005 102441 102527 - tRNA-Ser tRNA-Ser3 tRNA gene100 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0005 Afer_R0006 Afer_R0006 Afer_R0006 108980 109064 - tRNA-Ser tRNA-Ser2 tRNA gene106 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0006 Afer_R0007 Afer_R0007 ffs ffs 109147 109256 + SRP RNA%3B RNA component of signal recognition particle gene gene107 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0007 Afer_R0008 Afer_R0008 Afer_R0008 240048 240124 - tRNA-Pro tRNA-Pro3 tRNA gene242 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0008 Afer_R0009 Afer_R0009 Afer_R0009 291810 291881 - tRNA-Thr tRNA-Thr3 tRNA gene291 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0009 Afer_R0010 Afer_R0010 Afer_R0010 392035 392117 + tRNA-Tyr tRNA-Tyr1 tRNA gene388 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0010 Afer_R0011 Afer_R0011 Afer_R0011 394991 395066 + tRNA-Thr tRNA-Thr1 tRNA gene392 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0011 Afer_R0012 Afer_R0012 Afer_R0012 395068 395144 + tRNA-Met tRNA-Met1 tRNA gene393 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0012 Afer_R0013 Afer_R0013 Afer_R0013 396011 396083 + tRNA-Trp tRNA-Trp1 tRNA gene396 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0013 Afer_R0014 Afer_R0014 Afer_R0014 626867 626943 - tRNA-Val tRNA-Val3 tRNA gene633 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0014 Afer_R0015 Afer_R0015 Afer_R0015 769960 770033 + tRNA-Pro tRNA-Pro1 tRNA gene773 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0015 Afer_R0016 Afer_R0016 Afer_R0016 770047 770120 + tRNA-Gly tRNA-Gly2 tRNA gene774 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0016 Afer_R0017 Afer_R0017 Afer_R0017 806273 806348 - tRNA-Arg tRNA-Arg4 tRNA gene811 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0017 Afer_R0018 Afer_R0018 Afer_R0018 886689 886761 + tRNA-Gly tRNA-Gly3 tRNA gene882 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0018 Afer_R0019 Afer_R0019 Afer_R0019 1100600 1100675 + tRNA-Gln tRNA-Gln1 tRNA gene1079 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0019 Afer_R0020 Afer_R0020 Afer_R0020 1113737 1113852 - 5S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1093 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0020 Afer_R0021 Afer_R0021 Afer_R0021 1113738 1113854 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2C score 67.09 rRNA gene1094 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0021 Afer_R0022 Afer_R0022 Afer_R0022 1113897 1116889 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1095 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0022 Afer_R0023 Afer_R0023 Afer_R0023 1117010 1118507 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1096 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0023 Afer_R0024 Afer_R0024 Afer_R0024 1127356 1127438 - tRNA-Leu tRNA-Leu5 tRNA gene1105 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0024 Afer_R0025 Afer_R0025 Afer_R0025 1197218 1197304 + tRNA-Leu tRNA-Leu2 tRNA gene1171 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0025 Afer_R0026 Afer_R0026 Afer_R0026 1213014 1213087 + tRNA-Cys tRNA-Cys1 tRNA gene1187 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0026 Afer_R0027 Afer_R0027 Afer_R0027 1215814 1215889 + tRNA-Val tRNA-Val1 tRNA gene1190 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0027 Afer_R0028 Afer_R0028 Afer_R0028 1238090 1238164 - tRNA-Arg tRNA-Arg3 tRNA gene1211 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0028 Afer_R0029 Afer_R0029 Afer_R0029 1315382 1315457 - tRNA-Met tRNA-Met3 tRNA gene1286 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0029 Afer_R0030 Afer_R0030 Afer_R0030 1315538 1315610 - tRNA-Asn tRNA-Asn1 tRNA gene1287 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0030 Afer_R0031 Afer_R0031 Afer_R0031 1366330 1366403 - tRNA-Ala tRNA-Ala3 tRNA gene1343 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0031 Afer_R0032 Afer_R0032 Afer_R0032 1372332 1372404 - tRNA-OTHER tRNA-Undet1 tRNA gene1352 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0032 Afer_R0033 Afer_R0033 Afer_R0033 1377008 1377082 + tRNA-Lys tRNA-Lys1 tRNA gene1355 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0033 Afer_R0034 Afer_R0034 Afer_R0034 1390215 1390291 + tRNA-His tRNA-His1 tRNA gene1367 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0034 Afer_R0035 Afer_R0035 Afer_R0035 1398247 1398324 - tRNA-Pro tRNA-Pro2 tRNA gene1376 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0035 Afer_R0036 Afer_R0036 Afer_R0036 1443021 1443093 - tRNA-Lys tRNA-Lys2 tRNA gene1420 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0036 Afer_R0037 Afer_R0037 Afer_R0037 1468970 1469046 + tRNA-Val tRNA-Val2 tRNA gene1442 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0037 Afer_R0038 Afer_R0038 rnpB rnpB 1558855 1559148 + RNA component of RNaseP Bacterial RNase P class A as predicted by Rfam (RF00010)%2C score 165.55 gene gene1524 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0038 Afer_R0039 Afer_R0039 Afer_R0039 1590693 1590765 - tRNA-Glu tRNA-Glu2 tRNA gene1560 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0039 Afer_R0040 Afer_R0040 Afer_R0040 1599961 1600035 + tRNA-Gln tRNA-Gln2 tRNA gene1567 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0040 Afer_R0041 Afer_R0041 Afer_R0041 1613642 1613757 - 5S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1580 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0041 Afer_R0042 Afer_R0042 Afer_R0042 1613643 1613759 - 5S ribosomal RNA 5S ribosomal RNA as predicted by Rfam (RF00001)%2C score 67.09 rRNA gene1581 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0042 Afer_R0043 Afer_R0043 Afer_R0043 1613802 1616794 - 23S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1582 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0043 Afer_R0044 Afer_R0044 Afer_R0044 1616915 1618412 - 16S ribosomal RNA RNAmmer 1.2%2C Lagesen et al.%2C Nucleic Acids Res. Apr2 2%2C 2007 rRNA gene1583 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0044 Afer_R0045 Afer_R0045 Afer_R0045 1642632 1642713 - tRNA-Leu tRNA-Leu4 tRNA gene1605 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0045 Afer_R0046 Afer_R0046 Afer_R0046 1838446 1838530 + tRNA-Leu tRNA-Leu3 tRNA gene1794 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0046 Afer_R0047 Afer_R0047 ssrA ssrA 1841797 1842140 + tmRNA as predicted by Rfam (RF00023)%2C score 129.24 tmRNA gene1800 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0047 Afer_R0048 Afer_R0048 Afer_R0048 1900921 1900995 + tRNA-Arg tRNA-Arg1 tRNA gene1862 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0048 Afer_R0049 Afer_R0049 Afer_R0049 1940714 1940789 + tRNA-Ala tRNA-Ala1 tRNA gene1903 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0049 Afer_R0050 Afer_R0050 Afer_R0050 1956203 1956279 - tRNA-Met tRNA-Met2 tRNA gene1919 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0050 Afer_R0051 Afer_R0051 Afer_R0051 2004660 2004732 - tRNA-Thr tRNA-Thr2 tRNA gene1968 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0051 Afer_R0052 Afer_R0052 Afer_R0052 2033929 2034004 + tRNA-Glu tRNA-Glu1 tRNA gene1991 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0052 Afer_R0053 Afer_R0053 Afer_R0053 2035625 2035699 + tRNA-Asp tRNA-Asp1 tRNA gene1993 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0053 Afer_R0054 Afer_R0054 Afer_R0054 2035725 2035800 + tRNA-Phe tRNA-Phe1 tRNA gene1994 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0054 Afer_R0055 Afer_R0055 Afer_R0055 2134973 2135045 - tRNA-Ala tRNA-Ala2 tRNA gene2071 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0055 Afer_R0056 Afer_R0056 Afer_R0056 2135279 2135365 - tRNA-Ser tRNA-Ser1 tRNA gene2072 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0056 Afer_R0057 Afer_R0057 Afer_R0057 2136289 2136364 + tRNA-Arg tRNA-Arg2 tRNA gene2075 http://www.ncbi.nlm.nih.gov/gene/?term=Afer_R0057