Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 Gene3D G3DSA:1.20.140.10 252 403 4.2E-58 T 14-10-2018 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 141 235 8.3E-27 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 Gene3D G3DSA:2.40.110.10 140 251 7.4E-43 T 14-10-2018 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 399 1.4E-49 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 SUPERFAMILY SSF56645 20 258 3.93E-82 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 357 376 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 Gene3D G3DSA:1.10.540.10 13 138 2.6E-37 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 SUPERFAMILY SSF47203 245 401 1.37E-59 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 143 155 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 26 137 4.8E-31 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Afer_1526 6ab859534a88fb3c2f02cc6f182d856d 404 PIRSF PIRSF016578 14 401 4.0E-24 T 14-10-2018 Afer_0727 e22ba17a633528303b4893197f454e94 101 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 3 89 9.1E-18 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Afer_0727 e22ba17a633528303b4893197f454e94 101 Gene3D G3DSA:3.30.1360.20 3 96 5.0E-19 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Afer_0727 e22ba17a633528303b4893197f454e94 101 SUPERFAMILY SSF55248 10 92 9.81E-20 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 Pfam PF00270 DEAD/DEAH box helicase 275 453 3.1E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 Gene3D G3DSA:3.40.50.300 257 476 5.0E-77 T 14-10-2018 Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 SUPERFAMILY SSF52540 182 473 4.91E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 Pfam PF17191 RecG wedge domain 23 158 2.3E-15 T 14-10-2018 IPR033454 RecG, wedge domain Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 SUPERFAMILY SSF52540 408 621 2.15E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 SMART SM00490 526 610 1.3E-22 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 Pfam PF00271 Helicase conserved C-terminal domain 499 609 1.2E-18 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 Gene3D G3DSA:3.40.50.300 478 650 3.6E-54 T 14-10-2018 Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 SUPERFAMILY SSF50249 15 177 6.0E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 SMART SM00487 268 479 6.0E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 33 684 9.0E-200 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 Afer_1516 8e576a5d2a907be2ddf0f1eaeed7eb49 720 Gene3D G3DSA:2.40.50.140 50 147 3.6E-15 T 14-10-2018 Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 476 61.322 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 Gene3D G3DSA:3.40.50.12160 4 129 7.5E-32 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 5 472 1.1E-122 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 155 175 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 Pfam PF04055 Radical SAM superfamily 155 355 6.4E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 SUPERFAMILY SSF102114 142 404 8.83E-56 T 14-10-2018 Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 SMART SM00729 151 400 1.1E-52 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 Pfam PF01938 TRAM domain 412 474 2.1E-6 T 14-10-2018 IPR002792 TRAM domain Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 Pfam PF00919 Uncharacterized protein family UPF0004 6 103 2.0E-26 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 Afer_0654 a9c3474f7aa7321ba938dc2edf5978e7 487 Gene3D G3DSA:3.80.30.20 149 412 1.7E-78 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 SUPERFAMILY SSF52440 1 113 2.45E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 Pfam PF00364 Biotin-requiring enzyme 579 643 3.6E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 Gene3D G3DSA:3.30.470.130 1 437 2.6E-173 T 14-10-2018 Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 SMART SM00878 326 432 1.1E-52 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 SUPERFAMILY SSF51230 569 644 2.62E-20 T 14-10-2018 IPR011053 Single hybrid motif Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 4.7E-33 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 Gene3D G3DSA:2.40.50.100 569 644 4.5E-23 T 14-10-2018 Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 SUPERFAMILY SSF51246 321 434 9.94E-38 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 276 283 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 Pfam PF02785 Biotin carboxylase C-terminal domain 326 433 5.5E-35 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 SUPERFAMILY SSF56059 83 336 5.13E-61 T 14-10-2018 Afer_1032 86c3e19a0b766c6c26f8777d46ac8104 646 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 310 1.4E-65 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Afer_0907 8a8811863594c02ccacf9955837043c5 579 SMART SM00382 257 410 8.2E-22 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0907 8a8811863594c02ccacf9955837043c5 579 TIGRFAM TIGR03689 pup_AAA: proteasome ATPase 44 556 3.0E-233 T 14-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 Afer_0907 8a8811863594c02ccacf9955837043c5 579 ProSitePatterns PS00674 AAA-protein family signature. 378 396 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Afer_0907 8a8811863594c02ccacf9955837043c5 579 Gene3D G3DSA:2.40.50.140 85 143 9.7E-26 T 14-10-2018 Afer_0907 8a8811863594c02ccacf9955837043c5 579 Hamap MF_02112 Proteasome-associated ATPase [mpa]. 46 558 49.602 T 14-10-2018 IPR022482 Proteasome ATPase GO:0000502|GO:0010498|GO:0016887|GO:0019941 Afer_0907 8a8811863594c02ccacf9955837043c5 579 Gene3D G3DSA:1.10.8.60 409 428 3.2E-61 T 14-10-2018 Afer_0907 8a8811863594c02ccacf9955837043c5 579 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 261 408 2.3E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_0907 8a8811863594c02ccacf9955837043c5 579 Pfam PF16450 Proteasomal ATPase OB/ID domain 88 218 6.4E-45 T 14-10-2018 IPR032501 Proteasomal ATPase, OB/ID domain Afer_0907 8a8811863594c02ccacf9955837043c5 579 Gene3D G3DSA:3.40.50.300 220 408 3.2E-61 T 14-10-2018 Afer_0907 8a8811863594c02ccacf9955837043c5 579 SUPERFAMILY SSF52540 219 517 4.43E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0907 8a8811863594c02ccacf9955837043c5 579 Gene3D G3DSA:1.20.5.170 39 84 7.0E-9 T 14-10-2018 Afer_0907 8a8811863594c02ccacf9955837043c5 579 Gene3D G3DSA:2.40.50.140 145 219 1.0E-17 T 14-10-2018 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 ProSitePatterns PS00331 Malic enzymes signature. 232 248 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 PIRSF PIRSF000106 33 460 1.9E-73 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 PRINTS PR00072 Malic enzyme signature 232 248 4.2E-9 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 PRINTS PR00072 Malic enzyme signature 263 279 4.2E-9 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 PRINTS PR00072 Malic enzyme signature 153 175 4.2E-9 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 Gene3D G3DSA:3.40.50.720 234 460 4.3E-71 T 14-10-2018 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 SMART SM01274 91 224 1.1E-77 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 SUPERFAMILY SSF51735 236 458 1.32E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 Pfam PF03949 Malic enzyme, NAD binding domain 238 454 1.5E-21 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 SMART SM00919 236 458 1.7E-99 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 Pfam PF00390 Malic enzyme, N-terminal domain 98 187 8.6E-19 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 Gene3D G3DSA:3.40.50.10380 74 233 4.0E-69 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Afer_0622 e63e72d5fcd1c65be32f1d265d117882 460 SUPERFAMILY SSF53223 85 234 3.38E-53 T 14-10-2018 Afer_1754 08da019e481a3f7c9089f5396d12d006 171 ProSitePatterns PS01317 SsrA-binding protein. 38 50 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site Afer_1754 08da019e481a3f7c9089f5396d12d006 171 SUPERFAMILY SSF74982 16 144 7.19E-46 T 14-10-2018 IPR023620 Small protein B Afer_1754 08da019e481a3f7c9089f5396d12d006 171 Hamap MF_00023 SsrA-binding protein [smpB]. 1 169 59.895 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Afer_1754 08da019e481a3f7c9089f5396d12d006 171 TIGRFAM TIGR00086 smpB: SsrA-binding protein 20 160 7.0E-50 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Afer_1754 08da019e481a3f7c9089f5396d12d006 171 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 20 144 1.0E-35 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Afer_1754 08da019e481a3f7c9089f5396d12d006 171 Gene3D G3DSA:2.40.280.10 14 141 1.2E-46 T 14-10-2018 IPR023620 Small protein B Afer_1754 08da019e481a3f7c9089f5396d12d006 171 Pfam PF01668 SmpB protein 21 160 1.6E-54 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 Afer_0177 713917a9c65f8cc93ab90e9dfde508e5 327 Pfam PF00274 Fructose-bisphosphate aldolase class-I 4 326 6.9E-118 T 14-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0177 713917a9c65f8cc93ab90e9dfde508e5 327 SUPERFAMILY SSF51569 2 327 1.67E-111 T 14-10-2018 Afer_0177 713917a9c65f8cc93ab90e9dfde508e5 327 Gene3D G3DSA:3.20.20.70 1 327 7.8E-133 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0040 253f6611d90ddd5acf2b210627565668 299 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 23 273 8.0E-91 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Afer_0040 253f6611d90ddd5acf2b210627565668 299 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 11 273 39.567 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Afer_0040 253f6611d90ddd5acf2b210627565668 299 Gene3D G3DSA:3.20.20.60 13 281 6.8E-104 T 14-10-2018 Afer_0040 253f6611d90ddd5acf2b210627565668 299 PIRSF PIRSF000388 3 276 9.7E-99 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Afer_0040 253f6611d90ddd5acf2b210627565668 299 Pfam PF02548 Ketopantoate hydroxymethyltransferase 21 268 4.1E-100 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 Afer_0040 253f6611d90ddd5acf2b210627565668 299 SUPERFAMILY SSF51621 21 273 7.07E-94 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Afer_0125 7288bf28fe5db346b37d1f7ded96246c 103 Gene3D G3DSA:3.30.70.1710 2 102 6.1E-35 T 14-10-2018 Afer_0125 7288bf28fe5db346b37d1f7ded96246c 103 SMART SM00877 8 85 3.8E-29 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Afer_0125 7288bf28fe5db346b37d1f7ded96246c 103 Pfam PF00936 BMC domain 9 84 1.8E-24 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Afer_0125 7288bf28fe5db346b37d1f7ded96246c 103 SUPERFAMILY SSF143414 9 94 4.32E-27 T 14-10-2018 IPR037233 CcmK-like superfamily Afer_0125 7288bf28fe5db346b37d1f7ded96246c 103 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 26 45 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Afer_0125 7288bf28fe5db346b37d1f7ded96246c 103 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 9 70 2.0E-19 T 14-10-2018 Afer_0302 f51a737835ccc1e03bb133fc9232b750 109 Gene3D G3DSA:1.10.10.60 23 104 1.8E-14 T 14-10-2018 Afer_0302 f51a737835ccc1e03bb133fc9232b750 109 Pfam PF01527 Transposase 16 90 6.8E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0302 f51a737835ccc1e03bb133fc9232b750 109 SUPERFAMILY SSF46689 18 106 2.51E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0153 f51a737835ccc1e03bb133fc9232b750 109 Gene3D G3DSA:1.10.10.60 23 104 1.8E-14 T 14-10-2018 Afer_0153 f51a737835ccc1e03bb133fc9232b750 109 Pfam PF01527 Transposase 16 90 6.8E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0153 f51a737835ccc1e03bb133fc9232b750 109 SUPERFAMILY SSF46689 18 106 2.51E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1315 f51a737835ccc1e03bb133fc9232b750 109 Gene3D G3DSA:1.10.10.60 23 104 1.8E-14 T 14-10-2018 Afer_1315 f51a737835ccc1e03bb133fc9232b750 109 Pfam PF01527 Transposase 16 90 6.8E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_1315 f51a737835ccc1e03bb133fc9232b750 109 SUPERFAMILY SSF46689 18 106 2.51E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0981 f51a737835ccc1e03bb133fc9232b750 109 Gene3D G3DSA:1.10.10.60 23 104 1.8E-14 T 14-10-2018 Afer_0981 f51a737835ccc1e03bb133fc9232b750 109 Pfam PF01527 Transposase 16 90 6.8E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0981 f51a737835ccc1e03bb133fc9232b750 109 SUPERFAMILY SSF46689 18 106 2.51E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1774 f51a737835ccc1e03bb133fc9232b750 109 Gene3D G3DSA:1.10.10.60 23 104 1.8E-14 T 14-10-2018 Afer_1774 f51a737835ccc1e03bb133fc9232b750 109 Pfam PF01527 Transposase 16 90 6.8E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_1774 f51a737835ccc1e03bb133fc9232b750 109 SUPERFAMILY SSF46689 18 106 2.51E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0980 f51a737835ccc1e03bb133fc9232b750 109 Gene3D G3DSA:1.10.10.60 23 104 1.8E-14 T 14-10-2018 Afer_0980 f51a737835ccc1e03bb133fc9232b750 109 Pfam PF01527 Transposase 16 90 6.8E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0980 f51a737835ccc1e03bb133fc9232b750 109 SUPERFAMILY SSF46689 18 106 2.51E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0520 f51a737835ccc1e03bb133fc9232b750 109 Gene3D G3DSA:1.10.10.60 23 104 1.8E-14 T 14-10-2018 Afer_0520 f51a737835ccc1e03bb133fc9232b750 109 Pfam PF01527 Transposase 16 90 6.8E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0520 f51a737835ccc1e03bb133fc9232b750 109 SUPERFAMILY SSF46689 18 106 2.51E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1120 96311b883d9fe8b6289e794d26a595ed 349 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 3 322 5.1E-78 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Afer_1120 96311b883d9fe8b6289e794d26a595ed 349 SUPERFAMILY SSF103025 4 267 1.79E-78 T 14-10-2018 Afer_1120 96311b883d9fe8b6289e794d26a595ed 349 Gene3D G3DSA:3.30.1360.120 2 345 6.8E-94 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Afer_1120 96311b883d9fe8b6289e794d26a595ed 349 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 252 323 3.5E-12 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 Afer_1120 96311b883d9fe8b6289e794d26a595ed 349 PIRSF PIRSF006487 1 349 6.5E-62 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Afer_1120 96311b883d9fe8b6289e794d26a595ed 349 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 245 1.3E-67 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Afer_1120 96311b883d9fe8b6289e794d26a595ed 349 SUPERFAMILY SSF101790 259 346 1.57E-12 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal Afer_1821 28b6b90d5bba61e7d801b5e680681e09 292 SUPERFAMILY SSF51735 2 288 9.54E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1821 28b6b90d5bba61e7d801b5e680681e09 292 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 13 240 1.2E-23 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 Afer_1821 28b6b90d5bba61e7d801b5e680681e09 292 Gene3D G3DSA:3.30.1780.10 18 282 1.5E-46 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 Afer_1821 28b6b90d5bba61e7d801b5e680681e09 292 Gene3D G3DSA:3.40.50.720 115 274 1.5E-46 T 14-10-2018 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 Pfam PF01556 DnaJ C terminal domain 125 338 7.3E-36 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 Gene3D G3DSA:2.10.230.10 151 211 1.7E-32 T 14-10-2018 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 SUPERFAMILY SSF49493 263 349 9.42E-24 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 ProSitePatterns PS00636 Nt-dnaJ domain signature. 50 69 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 Gene3D G3DSA:2.60.260.20 121 253 1.7E-32 T 14-10-2018 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 Gene3D G3DSA:2.60.260.20 258 360 1.5E-30 T 14-10-2018 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 Pfam PF00684 DnaJ central domain 151 211 6.3E-14 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 8 360 35.307 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 SUPERFAMILY SSF46565 9 89 1.06E-29 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 Gene3D G3DSA:1.10.287.110 8 120 3.5E-30 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 Pfam PF00226 DnaJ domain 11 70 1.4E-24 T 14-10-2018 IPR001623 DnaJ domain Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 11 354 2.7E-115 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 PRINTS PR00625 DnaJ domain signature 31 46 5.3E-13 T 14-10-2018 IPR001623 DnaJ domain Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 PRINTS PR00625 DnaJ domain signature 65 84 5.3E-13 T 14-10-2018 IPR001623 DnaJ domain Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 PRINTS PR00625 DnaJ domain signature 13 31 5.3E-13 T 14-10-2018 IPR001623 DnaJ domain Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 SUPERFAMILY SSF49493 117 265 2.62E-18 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 SMART SM00271 10 65 1.1E-26 T 14-10-2018 IPR001623 DnaJ domain Afer_1962 7b6280541e413ffd5e80854277b9bcdb 361 SUPERFAMILY SSF57938 138 213 6.8E-19 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Afer_0909 9144da51cb8cfe768aa3e847aa01e589 64 Hamap MF_02106 Prokaryotic ubiquitin-like protein Pup [pup]. 1 64 15.654 T 14-10-2018 IPR008515 Ubiquitin-like, Pup Afer_0909 9144da51cb8cfe768aa3e847aa01e589 64 TIGRFAM TIGR03687 pupylate_cterm: ubiquitin-like protein Pup 35 64 2.1E-19 T 14-10-2018 IPR008515 Ubiquitin-like, Pup Afer_0909 9144da51cb8cfe768aa3e847aa01e589 64 Pfam PF05639 Pup-like protein 4 64 1.5E-21 T 14-10-2018 IPR008515 Ubiquitin-like, Pup Afer_1914 6ebb0a600b4209bd6c36e72b2d1026b8 306 Gene3D G3DSA:3.40.50.620 31 227 1.5E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1914 6ebb0a600b4209bd6c36e72b2d1026b8 306 Pfam PF01171 PP-loop family 38 194 7.6E-23 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 Afer_1914 6ebb0a600b4209bd6c36e72b2d1026b8 306 SUPERFAMILY SSF52402 32 222 8.38E-36 T 14-10-2018 Afer_1914 6ebb0a600b4209bd6c36e72b2d1026b8 306 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 22 281 16.333 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 249 282 3.7E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Gene3D G3DSA:3.40.120.10 541 732 6.7E-21 T 14-10-2018 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 SUPERFAMILY SSF51161 233 424 4.58E-25 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Pfam PF00483 Nucleotidyl transferase 3 232 1.6E-50 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Gene3D G3DSA:3.90.550.10 1 231 6.1E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 SUPERFAMILY SSF55957 751 828 4.19E-6 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 383 513 4.9E-15 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 SUPERFAMILY SSF53738 376 519 6.67E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 SUPERFAMILY SSF53738 532 633 3.81E-5 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Gene3D G3DSA:2.160.10.10 232 376 4.8E-22 T 14-10-2018 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Gene3D G3DSA:3.40.120.10 631 735 6.7E-21 T 14-10-2018 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 533 630 1.1E-7 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 SUPERFAMILY SSF53448 2 307 1.67E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1123 d5bba6d4acc629159bd3c046a5a322fa 854 Gene3D G3DSA:3.40.120.10 381 528 9.4E-22 T 14-10-2018 Afer_0833 f4892f310624449445416f212f38a6c6 97 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 4 87 17.568 T 14-10-2018 IPR003482 Transcription factor WhiB Afer_0833 f4892f310624449445416f212f38a6c6 97 Pfam PF02467 Transcription factor WhiB 14 80 6.5E-22 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Afer_1409 a74760894257734e75a9b197253f6dbf 252 SUPERFAMILY SSF46785 5 75 1.75E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1409 a74760894257734e75a9b197253f6dbf 252 Gene3D G3DSA:3.40.1410.10 76 239 3.8E-30 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Afer_1409 a74760894257734e75a9b197253f6dbf 252 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 6.6E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1409 a74760894257734e75a9b197253f6dbf 252 Gene3D G3DSA:1.10.10.10 3 75 4.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1409 a74760894257734e75a9b197253f6dbf 252 Pfam PF07702 UTRA domain 93 230 2.9E-22 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Afer_1409 a74760894257734e75a9b197253f6dbf 252 SUPERFAMILY SSF64288 59 235 2.51E-35 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Afer_1409 a74760894257734e75a9b197253f6dbf 252 SMART SM00345 12 71 2.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1409 a74760894257734e75a9b197253f6dbf 252 SMART SM00866 92 231 1.4E-23 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Afer_1409 a74760894257734e75a9b197253f6dbf 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 5.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1409 a74760894257734e75a9b197253f6dbf 252 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 5.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1099 e60f18b646b57b3cca184b5fcd818c0c 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 220 7.4E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_1099 e60f18b646b57b3cca184b5fcd818c0c 225 Gene3D G3DSA:3.40.50.2300 1 115 7.9E-32 T 14-10-2018 Afer_1099 e60f18b646b57b3cca184b5fcd818c0c 225 SMART SM00448 3 113 2.5E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1099 e60f18b646b57b3cca184b5fcd818c0c 225 SUPERFAMILY SSF52172 3 126 1.04E-35 T 14-10-2018 IPR011006 CheY-like superfamily Afer_1099 e60f18b646b57b3cca184b5fcd818c0c 225 Pfam PF00072 Response regulator receiver domain 5 114 5.0E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1099 e60f18b646b57b3cca184b5fcd818c0c 225 Gene3D G3DSA:1.10.10.10 116 225 2.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1099 e60f18b646b57b3cca184b5fcd818c0c 225 SMART SM00862 148 220 1.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_1099 e60f18b646b57b3cca184b5fcd818c0c 225 SUPERFAMILY SSF46894 126 221 2.21E-27 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_0870 662efc8c328ad2e9ba5e2a3ec81f063f 328 SUPERFAMILY SSF56112 8 272 1.09E-75 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Afer_0870 662efc8c328ad2e9ba5e2a3ec81f063f 328 Gene3D G3DSA:1.10.510.10 93 282 4.5E-51 T 14-10-2018 Afer_0870 662efc8c328ad2e9ba5e2a3ec81f063f 328 PIRSF PIRSF000654 10 282 2.9E-29 T 14-10-2018 Afer_0870 662efc8c328ad2e9ba5e2a3ec81f063f 328 Pfam PF00069 Protein kinase domain 13 261 7.8E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Afer_0870 662efc8c328ad2e9ba5e2a3ec81f063f 328 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 Afer_0870 662efc8c328ad2e9ba5e2a3ec81f063f 328 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 132 144 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Afer_0870 662efc8c328ad2e9ba5e2a3ec81f063f 328 Gene3D G3DSA:3.30.200.20 1 91 1.5E-18 T 14-10-2018 Afer_0870 662efc8c328ad2e9ba5e2a3ec81f063f 328 SMART SM00220 12 274 1.4E-54 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Afer_1869 7e0aff943a73d7f44fe51525ab7cf823 129 Gene3D G3DSA:2.40.50.140 12 123 1.7E-29 T 14-10-2018 Afer_1869 7e0aff943a73d7f44fe51525ab7cf823 129 PIRSF PIRSF002070 20 128 6.2E-27 T 14-10-2018 Afer_1869 7e0aff943a73d7f44fe51525ab7cf823 129 Pfam PF00436 Single-strand binding protein family 24 117 2.2E-24 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Afer_1869 7e0aff943a73d7f44fe51525ab7cf823 129 Hamap MF_00984 Single-stranded DNA-binding protein. 24 122 24.778 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Afer_1869 7e0aff943a73d7f44fe51525ab7cf823 129 SUPERFAMILY SSF50249 23 123 4.0E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1869 7e0aff943a73d7f44fe51525ab7cf823 129 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 23 121 1.8E-22 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Afer_0498 c32d360b0d0c527467093f77e15a951c 389 Gene3D G3DSA:1.20.1250.20 9 389 4.9E-53 T 14-10-2018 Afer_0498 c32d360b0d0c527467093f77e15a951c 389 Pfam PF07690 Major Facilitator Superfamily 19 354 6.0E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_0498 c32d360b0d0c527467093f77e15a951c 389 SUPERFAMILY SSF103473 10 387 6.93E-46 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_0969 2892348da839801007fcae6f6401011c 257 Gene3D G3DSA:3.40.50.620 1 253 1.8E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0969 2892348da839801007fcae6f6401011c 257 Pfam PF01012 Electron transfer flavoprotein domain 30 209 6.0E-25 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Afer_0969 2892348da839801007fcae6f6401011c 257 SUPERFAMILY SSF52402 1 250 2.02E-46 T 14-10-2018 Afer_0969 2892348da839801007fcae6f6401011c 257 PIRSF PIRSF000090 1 256 5.0E-50 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Afer_0969 2892348da839801007fcae6f6401011c 257 SMART SM00893 23 210 8.4E-26 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Afer_1523 77cd818ce1fd33f1dd210218660ac9e3 536 SUPERFAMILY SSF81342 46 250 6.38E-24 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Afer_1523 77cd818ce1fd33f1dd210218660ac9e3 536 Gene3D G3DSA:1.20.810.10 31 279 6.8E-29 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Afer_1523 77cd818ce1fd33f1dd210218660ac9e3 536 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 100 248 1.1E-17 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Afer_1309 2c4b2499a02d2db6ff8b874d6d4c266b 216 SUPERFAMILY SSF50475 2 178 5.08E-48 T 14-10-2018 Afer_1309 2c4b2499a02d2db6ff8b874d6d4c266b 216 Gene3D G3DSA:2.30.110.10 1 212 6.8E-58 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Afer_1309 2c4b2499a02d2db6ff8b874d6d4c266b 216 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 15 156 2.5E-35 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related Afer_1161 08ae05d4ea6f043124e47edd82afeb17 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.1E-13 T 14-10-2018 Afer_1161 08ae05d4ea6f043124e47edd82afeb17 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 144 159 6.1E-13 T 14-10-2018 Afer_1161 08ae05d4ea6f043124e47edd82afeb17 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 268 283 6.1E-13 T 14-10-2018 Afer_1161 08ae05d4ea6f043124e47edd82afeb17 429 Gene3D G3DSA:3.50.50.60 6 306 1.9E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1161 08ae05d4ea6f043124e47edd82afeb17 429 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 8 302 4.9E-51 T 14-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 Afer_1161 08ae05d4ea6f043124e47edd82afeb17 429 Pfam PF01494 FAD binding domain 8 165 4.7E-9 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Afer_1161 08ae05d4ea6f043124e47edd82afeb17 429 SUPERFAMILY SSF51905 7 325 7.51E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 Gene3D G3DSA:3.40.50.620 23 576 2.4E-190 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 Gene3D G3DSA:1.10.730.10 8 760 2.4E-190 T 14-10-2018 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 SUPERFAMILY SSF52374 3 616 3.96E-105 T 14-10-2018 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 PRINTS PR00986 Valyl-tRNA synthetase signature 38 49 1.2E-18 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 PRINTS PR00986 Valyl-tRNA synthetase signature 496 517 1.2E-18 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 PRINTS PR00986 Valyl-tRNA synthetase signature 248 265 1.2E-18 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 PRINTS PR00986 Valyl-tRNA synthetase signature 527 545 1.2E-18 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 PRINTS PR00986 Valyl-tRNA synthetase signature 380 393 1.2E-18 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 SUPERFAMILY SSF50677 211 375 1.31E-34 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 45 56 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 17 612 2.2E-92 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 Hamap MF_02005 Valine--tRNA ligase [valS]. 3 837 26.716 T 14-10-2018 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 Pfam PF08264 Anticodon-binding domain of tRNA 657 766 2.1E-19 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 Gene3D G3DSA:3.90.740.10 194 376 2.4E-190 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Afer_0307 7f1e16d31061dfadf0c999f554e6dad6 855 SUPERFAMILY SSF47323 627 843 1.64E-28 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0052 d79cc7af068b5e1eaab73757211c8982 201 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 181 2.1E-60 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Afer_0052 d79cc7af068b5e1eaab73757211c8982 201 Gene3D G3DSA:2.70.40.10 1 187 2.0E-57 T 14-10-2018 IPR036157 dUTPase-like superfamily Afer_0052 d79cc7af068b5e1eaab73757211c8982 201 Hamap MF_00146 dCTP deaminase [dcd]. 1 182 34.78 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 Afer_0052 d79cc7af068b5e1eaab73757211c8982 201 Pfam PF00692 dUTPase 70 178 7.2E-10 T 14-10-2018 IPR029054 dUTPase-like Afer_0052 d79cc7af068b5e1eaab73757211c8982 201 SUPERFAMILY SSF51283 1 184 4.97E-53 T 14-10-2018 IPR036157 dUTPase-like superfamily Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 155 184 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 Gene3D G3DSA:3.40.50.720 1 125 3.0E-45 T 14-10-2018 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 Pfam PF00549 CoA-ligase 154 275 3.0E-20 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 Pfam PF02629 CoA binding domain 6 98 4.6E-29 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 290 9.5E-126 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 SUPERFAMILY SSF52210 125 291 3.14E-51 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 PIRSF PIRSF001553 1 294 4.6E-120 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 SUPERFAMILY SSF51735 1 124 1.48E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 239 252 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 4.0E-34 T 14-10-2018 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 PRINTS PR01798 Succinyl-CoA synthase signature 243 260 4.0E-34 T 14-10-2018 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 PRINTS PR01798 Succinyl-CoA synthase signature 211 224 4.0E-34 T 14-10-2018 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 PRINTS PR01798 Succinyl-CoA synthase signature 180 198 4.0E-34 T 14-10-2018 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 291 40.821 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 Gene3D G3DSA:3.40.50.261 126 292 1.5E-68 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_0320 30c191052e15f47044fa1b2aca59ab64 295 SMART SM00881 4 100 4.3E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 16 26 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PRINTS PR00477 Phosphoglycerate kinase family signature 170 189 2.5E-59 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PRINTS PR00477 Phosphoglycerate kinase family signature 325 336 2.5E-59 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PRINTS PR00477 Phosphoglycerate kinase family signature 11 27 2.5E-59 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PRINTS PR00477 Phosphoglycerate kinase family signature 348 365 2.5E-59 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PRINTS PR00477 Phosphoglycerate kinase family signature 117 139 2.5E-59 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PRINTS PR00477 Phosphoglycerate kinase family signature 147 169 2.5E-59 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PRINTS PR00477 Phosphoglycerate kinase family signature 292 317 2.5E-59 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 372 35.598 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 SUPERFAMILY SSF53748 6 371 1.07E-115 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 Gene3D G3DSA:3.40.50.1260 90 154 4.4E-24 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PIRSF PIRSF000724 88 377 1.2E-88 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 PIRSF PIRSF000724 1 90 1.7E-19 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 Pfam PF00162 Phosphoglycerate kinase 7 88 2.3E-20 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 Pfam PF00162 Phosphoglycerate kinase 91 360 3.3E-94 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 Gene3D G3DSA:3.40.50.1260 155 361 3.9E-72 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0850 fc6a594582edeab925fbdc6969b02a6c 378 Gene3D G3DSA:3.40.50.1260 4 89 1.9E-24 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 Gene3D G3DSA:3.30.1330.50 203 362 6.8E-50 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 206 356 9.2E-42 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 Pfam PF02542 YgbB family 205 357 5.1E-44 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 SUPERFAMILY SSF53448 4 200 3.52E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 240 255 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 87 94 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 205 358 29.278 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3 199 1.7E-47 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 SUPERFAMILY SSF69765 205 357 1.44E-42 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 Afer_1900 aa8ade5173b9b7503d3745fe74450b22 364 Gene3D G3DSA:3.90.550.10 1 202 3.6E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 SUPERFAMILY SSF52425 3 163 3.66E-21 T 14-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 Gene3D G3DSA:1.10.579.10 268 446 8.5E-77 T 14-10-2018 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 298 310 - T 14-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 Gene3D G3DSA:3.40.50.620 3 185 8.4E-44 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 Pfam PF03441 FAD binding domain of DNA photolyase 246 440 1.3E-81 T 14-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 PRINTS PR00147 DNA photolyase signature 318 336 1.6E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 PRINTS PR00147 DNA photolyase signature 298 314 1.6E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 PRINTS PR00147 DNA photolyase signature 357 371 1.6E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 PRINTS PR00147 DNA photolyase signature 130 146 1.6E-23 T 14-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 SUPERFAMILY SSF48173 187 443 3.53E-100 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 Pfam PF00875 DNA photolyase 3 149 3.9E-19 T 14-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 Afer_1302 59dc9808ad1489f4d34dfe04ff75c74b 456 Gene3D G3DSA:1.25.40.80 119 260 8.4E-44 T 14-10-2018 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 SUPERFAMILY SSF53795 237 588 5.49E-148 T 14-10-2018 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 PIRSF PIRSF001348 3 595 8.1E-251 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 Pfam PF17297 Phosphoenolpyruvate carboxykinase N-terminal domain 12 233 6.0E-87 T 14-10-2018 IPR035078 Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 Gene3D G3DSA:3.40.449.10 13 236 4.6E-244 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 ProSitePatterns PS00505 Phosphoenolpyruvate carboxykinase (GTP) signature. 261 269 - T 14-10-2018 IPR018091 Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site GO:0004613 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 Hamap MF_00452 Phosphoenolpyruvate carboxykinase [GTP] [pckG]. 1 594 45.424 T 14-10-2018 IPR008209 Phosphoenolpyruvate carboxykinase, GTP-utilising GO:0004611|GO:0005525|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 Gene3D G3DSA:3.90.228.20 237 588 4.6E-244 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 Gene3D G3DSA:2.170.8.10 48 390 4.6E-244 T 14-10-2018 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 SUPERFAMILY SSF68923 6 236 1.52E-85 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 Afer_0693 e0a56d77bf658f265bb9a1ff24b0bdda 598 Pfam PF00821 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain 237 589 4.3E-160 T 14-10-2018 IPR035077 Phosphoenolpyruvate carboxykinase, GTP-utilising, C-terminal GO:0004611|GO:0006094 KEGG: 00010+4.1.1.32|KEGG: 00020+4.1.1.32|KEGG: 00620+4.1.1.32|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 1 318 9.1E-103 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 20 315 2.5E-100 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 193 211 3.7E-24 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 60 69 3.7E-24 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 224 245 3.7E-24 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 24 35 3.7E-24 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 Gene3D G3DSA:1.20.120.640 309 368 2.7E-5 T 14-10-2018 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 SUPERFAMILY SSF52374 2 315 2.39E-76 T 14-10-2018 Afer_1230 2d25a5d63c103f277055307fcfd9b4cc 372 Gene3D G3DSA:3.40.50.620 1 307 2.1E-109 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0381 0787240c09f3757c471a6024fb0d25c3 250 Gene3D G3DSA:1.10.1670.40 12 205 5.2E-46 T 14-10-2018 Afer_0381 0787240c09f3757c471a6024fb0d25c3 250 Gene3D G3DSA:1.10.340.30 47 157 5.2E-46 T 14-10-2018 Afer_0381 0787240c09f3757c471a6024fb0d25c3 250 SUPERFAMILY SSF48150 45 205 9.94E-33 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Afer_0381 0787240c09f3757c471a6024fb0d25c3 250 SMART SM00478 59 206 6.6E-8 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Afer_0381 0787240c09f3757c471a6024fb0d25c3 250 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 55 194 4.1E-10 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 SUPERFAMILY SSF52540 353 597 2.5E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 ProSitePatterns PS00211 ABC transporters family signature. 161 175 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 577 666 9.8E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 238 323 5.7E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 240 305 2.6E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 578 647 4.8E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 Pfam PF00005 ABC transporter 380 526 4.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 SMART SM00382 387 576 8.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 SMART SM00382 39 238 3.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 Pfam PF00005 ABC transporter 31 188 1.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 Gene3D G3DSA:3.40.50.300 8 334 1.4E-90 T 14-10-2018 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 Gene3D G3DSA:3.40.50.300 353 676 4.1E-93 T 14-10-2018 Afer_0890 03f0a2d22908afc619af39b8628ea61a 690 SUPERFAMILY SSF52540 10 260 1.24E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1254 8dff90524081e1aeed74825cd7c1b029 218 Pfam PF03099 Biotin/lipoate A/B protein ligase family 49 173 1.6E-10 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Afer_1254 8dff90524081e1aeed74825cd7c1b029 218 Gene3D G3DSA:3.30.930.10 14 216 5.2E-27 T 14-10-2018 Afer_1254 8dff90524081e1aeed74825cd7c1b029 218 SUPERFAMILY SSF55681 15 213 1.16E-26 T 14-10-2018 Afer_1300 382d192af4a360f1a530fdeeebcac34c 155 SMART SM00900 74 151 3.6E-4 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Afer_1300 382d192af4a360f1a530fdeeebcac34c 155 Pfam PF04205 FMN-binding domain 74 148 1.2E-5 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 Afer_0998 202ec38bb4b86fed4505bcbefde5d1e5 408 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 316 377 1.9E-6 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0998 202ec38bb4b86fed4505bcbefde5d1e5 408 Gene3D G3DSA:3.40.50.11540 57 217 2.4E-44 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0998 202ec38bb4b86fed4505bcbefde5d1e5 408 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 56 203 2.9E-34 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0998 202ec38bb4b86fed4505bcbefde5d1e5 408 SUPERFAMILY SSF140490 310 377 3.92E-7 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0998 202ec38bb4b86fed4505bcbefde5d1e5 408 SUPERFAMILY SSF142019 53 223 3.66E-41 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0945 bc3503ab1fce7fb71d1b772a1c1be561 496 Gene3D G3DSA:3.30.70.3400 34 116 8.2E-20 T 14-10-2018 Afer_0945 bc3503ab1fce7fb71d1b772a1c1be561 496 SUPERFAMILY SSF82866 259 458 5.23E-28 T 14-10-2018 Afer_0945 bc3503ab1fce7fb71d1b772a1c1be561 496 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 468 37.31 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Afer_0945 bc3503ab1fce7fb71d1b772a1c1be561 496 Gene3D G3DSA:3.30.1360.200 145 278 1.3E-26 T 14-10-2018 Afer_0945 bc3503ab1fce7fb71d1b772a1c1be561 496 Pfam PF02355 Protein export membrane protein 284 456 9.8E-12 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Afer_0945 bc3503ab1fce7fb71d1b772a1c1be561 496 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 34 453 1.6E-104 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 Afer_0945 bc3503ab1fce7fb71d1b772a1c1be561 496 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 213 445 1.6E-54 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 420 442 1.9E-20 T 14-10-2018 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 166 1.9E-20 T 14-10-2018 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 248 1.9E-20 T 14-10-2018 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 302 1.9E-20 T 14-10-2018 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 4 473 2.5E-182 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 SUPERFAMILY SSF46548 6 155 4.97E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 455 8.3E-29 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 Gene3D G3DSA:1.10.1060.10 18 142 5.0E-23 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 Gene3D G3DSA:3.50.50.60 275 465 7.1E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 SUPERFAMILY SSF51971 144 400 7.65E-61 T 14-10-2018 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 SUPERFAMILY SSF51971 369 465 3.53E-13 T 14-10-2018 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 168 3.9E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 447 466 3.9E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 304 3.9E-9 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 132 1.1E-24 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Afer_1987 dc6b52449bbbc22c6c3a5d062be15e61 485 Gene3D G3DSA:3.50.50.60 143 273 9.6E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0734 9f032c3ab2cf8cf44ecdd364678b0e52 335 Gene3D G3DSA:3.90.25.10 193 314 1.2E-113 T 14-10-2018 Afer_0734 9f032c3ab2cf8cf44ecdd364678b0e52 335 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 2 321 9.0E-127 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 Afer_0734 9f032c3ab2cf8cf44ecdd364678b0e52 335 Gene3D G3DSA:3.40.50.720 2 306 1.2E-113 T 14-10-2018 Afer_0734 9f032c3ab2cf8cf44ecdd364678b0e52 335 SUPERFAMILY SSF51735 1 322 4.76E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0734 9f032c3ab2cf8cf44ecdd364678b0e52 335 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 306 7.0E-78 T 14-10-2018 IPR016040 NAD(P)-binding domain Afer_0214 107f4bbfd92eedcdadb424adc188cfba 394 SUPERFAMILY SSF52172 3 108 8.4E-27 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0214 107f4bbfd92eedcdadb424adc188cfba 394 Gene3D G3DSA:3.40.50.2300 2 142 1.2E-25 T 14-10-2018 Afer_0214 107f4bbfd92eedcdadb424adc188cfba 394 SMART SM00448 2 123 1.4E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0214 107f4bbfd92eedcdadb424adc188cfba 394 Gene3D G3DSA:3.40.50.180 199 392 4.4E-52 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Afer_0214 107f4bbfd92eedcdadb424adc188cfba 394 Pfam PF01339 CheB methylesterase 208 386 8.0E-46 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Afer_0214 107f4bbfd92eedcdadb424adc188cfba 394 SUPERFAMILY SSF52738 203 391 2.09E-49 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal Afer_0214 107f4bbfd92eedcdadb424adc188cfba 394 PIRSF PIRSF000876 2 393 1.4E-89 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 Afer_0214 107f4bbfd92eedcdadb424adc188cfba 394 Pfam PF00072 Response regulator receiver domain 5 111 1.6E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1675 3bc5795b497f5a374200cde884b6e031 232 SMART SM00967 1 71 1.5E-5 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Afer_1675 3bc5795b497f5a374200cde884b6e031 232 SUPERFAMILY SSF55315 2 67 2.59E-7 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Afer_1675 3bc5795b497f5a374200cde884b6e031 232 Gene3D G3DSA:3.40.1280.10 71 224 9.3E-36 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Afer_1675 3bc5795b497f5a374200cde884b6e031 232 SUPERFAMILY SSF75217 75 219 1.96E-26 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Afer_1675 3bc5795b497f5a374200cde884b6e031 232 Pfam PF00588 SpoU rRNA Methylase family 80 218 2.4E-26 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Afer_1675 3bc5795b497f5a374200cde884b6e031 232 Gene3D G3DSA:3.30.1330.30 1 68 2.1E-8 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Afer_0357 87c047618c4af9503b798787e7fee4f1 274 PIRSF PIRSF000193 2 268 3.4E-63 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 Gene3D G3DSA:3.40.50.720 2 163 1.3E-30 T 14-10-2018 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 266 2.3E-65 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 SUPERFAMILY SSF51735 4 159 1.15E-21 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0357 87c047618c4af9503b798787e7fee4f1 274 Gene3D G3DSA:1.10.3730.10 164 269 8.2E-34 T 14-10-2018 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 PRINTS PR00958 Homoserine kinase signature 10 25 2.1E-5 T 14-10-2018 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 PRINTS PR00958 Homoserine kinase signature 93 110 2.1E-5 T 14-10-2018 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 PRINTS PR00958 Homoserine kinase signature 166 181 2.1E-5 T 14-10-2018 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 8.6E-32 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 1.6E-5 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Afer_0357 87c047618c4af9503b798787e7fee4f1 274 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 266 23.804 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 Afer_0357 87c047618c4af9503b798787e7fee4f1 274 SUPERFAMILY SSF48179 161 267 1.11E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Afer_1277 499808ae451dee65f3a81704c70a696a 398 Gene3D G3DSA:3.30.450.90 69 173 1.5E-24 T 14-10-2018 Afer_1277 499808ae451dee65f3a81704c70a696a 398 SUPERFAMILY SSF52540 57 343 8.89E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1277 499808ae451dee65f3a81704c70a696a 398 Pfam PF00437 Type II/IV secretion system protein 73 341 2.3E-39 T 14-10-2018 IPR001482 Type II/IV secretion system protein Afer_1277 499808ae451dee65f3a81704c70a696a 398 SMART SM00382 192 396 0.0038 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1277 499808ae451dee65f3a81704c70a696a 398 Gene3D G3DSA:3.40.50.300 174 372 2.5E-35 T 14-10-2018 Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 1.1E-8 T 14-10-2018 Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.1E-8 T 14-10-2018 Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 8.3E-12 T 14-10-2018 Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 8.3E-12 T 14-10-2018 Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 8.3E-12 T 14-10-2018 Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 8.3E-12 T 14-10-2018 Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 Gene3D G3DSA:3.50.50.60 3 132 1.2E-15 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 Gene3D G3DSA:3.50.50.60 186 271 1.8E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 9.4E-22 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 Gene3D G3DSA:3.50.50.60 272 336 1.8E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0966 c2efb8fd9e431a7876d285d4bbf10e79 351 SUPERFAMILY SSF51905 3 343 2.2E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0181 31e77c465b089e1169808f141d036fce 388 SUPERFAMILY SSF55781 23 168 1.85E-20 T 14-10-2018 Afer_0181 31e77c465b089e1169808f141d036fce 388 SMART SM00387 290 383 4.2E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0181 31e77c465b089e1169808f141d036fce 388 SMART SM00065 21 169 5.3E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 Afer_0181 31e77c465b089e1169808f141d036fce 388 Gene3D G3DSA:3.30.565.10 256 381 1.7E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0181 31e77c465b089e1169808f141d036fce 388 SUPERFAMILY SSF55874 259 380 6.55E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0181 31e77c465b089e1169808f141d036fce 388 Gene3D G3DSA:3.30.450.40 2 169 1.3E-28 T 14-10-2018 IPR029016 GAF-like domain superfamily Afer_0181 31e77c465b089e1169808f141d036fce 388 Pfam PF13185 GAF domain 21 137 5.8E-13 T 14-10-2018 IPR003018 GAF domain GO:0005515 Afer_0181 31e77c465b089e1169808f141d036fce 388 Pfam PF07730 Histidine kinase 189 247 3.0E-8 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 Afer_0181 31e77c465b089e1169808f141d036fce 388 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 295 380 2.4E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 Gene3D G3DSA:1.20.5.470 359 395 3.6E-7 T 14-10-2018 Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 SUPERFAMILY SSF52402 5 203 1.7E-45 T 14-10-2018 Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 Gene3D G3DSA:3.40.50.620 5 171 1.2E-134 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 392 1.7E-143 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 Gene3D G3DSA:3.90.1260.10 63 346 1.2E-134 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 394 50.395 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 SUPERFAMILY SSF69864 170 393 3.79E-79 T 14-10-2018 Afer_1659 453a5d53910dbe3d8060fbf2f0008db6 398 Pfam PF00764 Arginosuccinate synthase 6 389 4.3E-157 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_0956 3003791c29652b4a945daa90c6a0b111 382 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 335 359 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_0956 3003791c29652b4a945daa90c6a0b111 382 Pfam PF01098 Cell cycle protein 22 374 3.0E-91 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_0956 3003791c29652b4a945daa90c6a0b111 382 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 21 377 3.4E-102 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1546 dca88f6bf7dc2387468deca3cecadb56 190 Pfam PF13710 ACT domain 31 92 5.1E-15 T 14-10-2018 Afer_1546 dca88f6bf7dc2387468deca3cecadb56 190 Gene3D G3DSA:3.30.70.1150 99 175 1.2E-15 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal Afer_1546 dca88f6bf7dc2387468deca3cecadb56 190 Gene3D G3DSA:3.30.70.260 19 97 8.1E-32 T 14-10-2018 Afer_1546 dca88f6bf7dc2387468deca3cecadb56 190 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 21 175 2.3E-46 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Afer_1546 dca88f6bf7dc2387468deca3cecadb56 190 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 22 95 2.0E-22 T 14-10-2018 Afer_1546 dca88f6bf7dc2387468deca3cecadb56 190 SUPERFAMILY SSF55021 99 178 5.27E-15 T 14-10-2018 Afer_1546 dca88f6bf7dc2387468deca3cecadb56 190 SUPERFAMILY SSF55021 22 94 3.67E-20 T 14-10-2018 Afer_1546 dca88f6bf7dc2387468deca3cecadb56 190 Pfam PF10369 Small subunit of acetolactate synthase 104 175 4.4E-15 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Afer_1508 7510d18c677154c3b47b64da5d185426 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 111 4.0E-23 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Afer_1508 7510d18c677154c3b47b64da5d185426 275 SMART SM00898 2 114 1.6E-25 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 Afer_1508 7510d18c677154c3b47b64da5d185426 275 SUPERFAMILY SSF81624 2 137 1.7E-24 T 14-10-2018 IPR035937 MutM-like, N-terminal Afer_1508 7510d18c677154c3b47b64da5d185426 275 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 271 1.1E-63 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 Afer_1508 7510d18c677154c3b47b64da5d185426 275 SUPERFAMILY SSF57716 222 272 9.99E-15 T 14-10-2018 Afer_1508 7510d18c677154c3b47b64da5d185426 275 ProSitePatterns PS01242 Zinc finger FPG-type signature. 247 271 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 Afer_1508 7510d18c677154c3b47b64da5d185426 275 Gene3D G3DSA:1.10.8.50 142 272 4.1E-40 T 14-10-2018 Afer_1508 7510d18c677154c3b47b64da5d185426 275 SUPERFAMILY SSF46946 130 218 1.27E-22 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Afer_1508 7510d18c677154c3b47b64da5d185426 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 217 2.6E-19 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Afer_1508 7510d18c677154c3b47b64da5d185426 275 SMART SM01232 130 222 5.2E-31 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 Afer_1508 7510d18c677154c3b47b64da5d185426 275 Gene3D G3DSA:3.20.190.10 2 118 7.4E-23 T 14-10-2018 IPR035937 MutM-like, N-terminal Afer_1508 7510d18c677154c3b47b64da5d185426 275 Pfam PF06827 Zinc finger found in FPG and IleRS 244 272 6.8E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 Afer_0090 6f4a9e8ac534e5150327f98ee564954a 422 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 29 228 2.5E-17 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_0090 6f4a9e8ac534e5150327f98ee564954a 422 SUPERFAMILY SSF81606 1 228 3.14E-65 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_0090 6f4a9e8ac534e5150327f98ee564954a 422 SMART SM00331 9 229 5.5E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_0090 6f4a9e8ac534e5150327f98ee564954a 422 Gene3D G3DSA:3.60.40.10 1 228 5.9E-68 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_0090 6f4a9e8ac534e5150327f98ee564954a 422 SMART SM00332 1 227 2.2E-22 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_1264 8164be0dc4169a06c4c7ee25ec4dad81 249 TIGRFAM TIGR00613 reco: DNA repair protein RecO 7 180 1.6E-24 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Afer_1264 8164be0dc4169a06c4c7ee25ec4dad81 249 Pfam PF02565 Recombination protein O C terminal 88 232 7.6E-12 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Afer_1264 8164be0dc4169a06c4c7ee25ec4dad81 249 Gene3D G3DSA:2.40.50.140 2 82 1.6E-13 T 14-10-2018 Afer_1264 8164be0dc4169a06c4c7ee25ec4dad81 249 Hamap MF_00201 DNA repair protein RecO [recO]. 3 240 19.009 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 Afer_1264 8164be0dc4169a06c4c7ee25ec4dad81 249 SUPERFAMILY SSF50249 5 77 1.25E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1264 8164be0dc4169a06c4c7ee25ec4dad81 249 Pfam PF11967 Recombination protein O N terminal 5 78 2.3E-18 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal Afer_1264 8164be0dc4169a06c4c7ee25ec4dad81 249 SUPERFAMILY SSF57863 88 198 2.56E-13 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger Afer_1029 70424288281ebf09159642df166fbacd 381 Gene3D G3DSA:1.10.540.10 1 120 1.6E-33 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Afer_1029 70424288281ebf09159642df166fbacd 381 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_1029 70424288281ebf09159642df166fbacd 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 1.5E-40 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Afer_1029 70424288281ebf09159642df166fbacd 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 4 118 7.5E-26 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Afer_1029 70424288281ebf09159642df166fbacd 381 Gene3D G3DSA:2.40.110.10 121 232 2.6E-40 T 14-10-2018 Afer_1029 70424288281ebf09159642df166fbacd 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 217 1.5E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Afer_1029 70424288281ebf09159642df166fbacd 381 Gene3D G3DSA:1.20.140.10 233 377 9.5E-41 T 14-10-2018 Afer_1029 70424288281ebf09159642df166fbacd 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_1029 70424288281ebf09159642df166fbacd 381 SUPERFAMILY SSF56645 2 242 2.23E-75 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Afer_1029 70424288281ebf09159642df166fbacd 381 SUPERFAMILY SSF47203 229 375 8.86E-42 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 SMART SM00843 637 702 2.7E-33 T 14-10-2018 IPR018541 FtsK gamma domain Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 SMART SM00382 373 561 1.1E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 24 134 3.1E-9 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 Pfam PF01580 FtsK/SpoIIIE family 353 540 7.6E-55 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 Gene3D G3DSA:3.30.980.40 235 336 1.9E-28 T 14-10-2018 Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 SUPERFAMILY SSF46785 639 703 1.18E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 Gene3D G3DSA:3.40.50.300 345 625 4.7E-105 T 14-10-2018 Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 Pfam PF09397 Ftsk gamma domain 639 699 6.2E-26 T 14-10-2018 IPR018541 FtsK gamma domain Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 SUPERFAMILY SSF52540 314 612 1.27E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0648 4f9b1e7bd8a199af0afe1ba108a5a1ba 724 Gene3D G3DSA:1.10.10.10 634 698 1.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1840 d224e52d7230f25233ef819999af02bb 79 Pfam PF09383 NIL domain 7 71 4.2E-13 T 14-10-2018 IPR018449 NIL domain Afer_1840 d224e52d7230f25233ef819999af02bb 79 Gene3D G3DSA:3.30.70.260 5 79 8.0E-11 T 14-10-2018 Afer_1840 d224e52d7230f25233ef819999af02bb 79 SMART SM00930 2 73 8.1E-12 T 14-10-2018 IPR018449 NIL domain Afer_1840 d224e52d7230f25233ef819999af02bb 79 SUPERFAMILY SSF55021 6 76 1.6E-16 T 14-10-2018 Afer_1688 172c750434e494a51e281cc23793376f 164 Pfam PF01327 Polypeptide deformylase 4 149 1.2E-43 T 14-10-2018 IPR023635 Peptide deformylase Afer_1688 172c750434e494a51e281cc23793376f 164 PIRSF PIRSF004749 1 162 4.5E-45 T 14-10-2018 IPR023635 Peptide deformylase Afer_1688 172c750434e494a51e281cc23793376f 164 Hamap MF_00163 Peptide deformylase [def]. 2 159 28.038 T 14-10-2018 IPR023635 Peptide deformylase Afer_1688 172c750434e494a51e281cc23793376f 164 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 8 155 5.5E-40 T 14-10-2018 IPR023635 Peptide deformylase Afer_1688 172c750434e494a51e281cc23793376f 164 SUPERFAMILY SSF56420 3 159 4.97E-54 T 14-10-2018 IPR036821 Peptide deformylase superfamily Afer_1688 172c750434e494a51e281cc23793376f 164 Gene3D G3DSA:3.90.45.10 1 164 1.1E-53 T 14-10-2018 IPR036821 Peptide deformylase superfamily Afer_1688 172c750434e494a51e281cc23793376f 164 PRINTS PR01576 Peptide deformylase signature 98 116 1.1E-31 T 14-10-2018 IPR023635 Peptide deformylase Afer_1688 172c750434e494a51e281cc23793376f 164 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-31 T 14-10-2018 IPR023635 Peptide deformylase Afer_1688 172c750434e494a51e281cc23793376f 164 PRINTS PR01576 Peptide deformylase signature 86 97 1.1E-31 T 14-10-2018 IPR023635 Peptide deformylase Afer_1688 172c750434e494a51e281cc23793376f 164 PRINTS PR01576 Peptide deformylase signature 117 146 1.1E-31 T 14-10-2018 IPR023635 Peptide deformylase Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 PRINTS PR00298 60kDa chaperonin signature 266 289 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 PRINTS PR00298 60kDa chaperonin signature 396 417 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 PRINTS PR00298 60kDa chaperonin signature 26 52 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 PRINTS PR00298 60kDa chaperonin signature 348 373 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 PRINTS PR00298 60kDa chaperonin signature 82 109 2.1E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 526 9.5E-252 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 SUPERFAMILY SSF54849 137 202 1.9E-23 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 SUPERFAMILY SSF52029 184 374 6.88E-83 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 Gene3D G3DSA:3.30.260.10 135 408 4.1E-224 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 SUPERFAMILY SSF48592 6 521 6.66E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 Gene3D G3DSA:3.50.7.10 190 370 4.1E-224 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 Gene3D G3DSA:1.10.560.10 7 521 4.1E-224 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 525 4.7E-103 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Afer_1846 e380eb8cf598081575cda908ea7bb6d6 540 Hamap MF_00600 60 kDa chaperonin [groL]. 1 537 41.024 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0236 8dd832d51ae84c7ae741bb0955c92280 156 SUPERFAMILY SSF52172 1 131 1.57E-13 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0236 8dd832d51ae84c7ae741bb0955c92280 156 Pfam PF00072 Response regulator receiver domain 4 116 2.3E-7 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0236 8dd832d51ae84c7ae741bb0955c92280 156 Gene3D G3DSA:3.40.50.12740 2 145 2.7E-14 T 14-10-2018 Afer_0236 8dd832d51ae84c7ae741bb0955c92280 156 SMART SM00448 2 116 0.0035 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1338 056eeb57c057787cb64fe9d7edc7763c 230 Gene3D G3DSA:1.10.10.10 44 157 1.9E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1338 056eeb57c057787cb64fe9d7edc7763c 230 SUPERFAMILY SSF46785 42 124 3.26E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1338 056eeb57c057787cb64fe9d7edc7763c 230 SMART SM00418 45 137 0.0022 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1338 056eeb57c057787cb64fe9d7edc7763c 230 Pfam PF12840 Helix-turn-helix domain 46 101 1.9E-12 T 14-10-2018 Afer_0642 de80d5a39328a068584c19525a012c53 85 Gene3D G3DSA:1.10.287.10 1 85 2.0E-35 T 14-10-2018 Afer_0642 de80d5a39328a068584c19525a012c53 85 Pfam PF00312 Ribosomal protein S15 4 84 2.8E-39 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0642 de80d5a39328a068584c19525a012c53 85 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 85 22.084 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0642 de80d5a39328a068584c19525a012c53 85 SUPERFAMILY SSF47060 4 85 1.29E-35 T 14-10-2018 IPR009068 S15/NS1, RNA-binding Afer_0642 de80d5a39328a068584c19525a012c53 85 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 3 85 5.0E-38 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0642 de80d5a39328a068584c19525a012c53 85 SMART SM01387 4 84 2.5E-53 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0642 de80d5a39328a068584c19525a012c53 85 ProSitePatterns PS00362 Ribosomal protein S15 signature. 35 65 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0642 de80d5a39328a068584c19525a012c53 85 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 6 84 1.0E-17 T 14-10-2018 Afer_1488 f5be08896021e5dd7573f3564701e5f3 235 Pfam PF02591 C4-type zinc ribbon domain 194 225 5.2E-8 T 14-10-2018 IPR003743 C4-type zinc ribbon domain Afer_1488 f5be08896021e5dd7573f3564701e5f3 235 Gene3D G3DSA:1.10.287.40 15 123 1.5E-5 T 14-10-2018 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 14 94 2.5E-16 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 SUPERFAMILY SSF55190 33 104 9.94E-15 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 Pfam PF05746 DALR anticodon binding domain 421 540 2.0E-28 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 540 22.904 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 133 142 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 SUPERFAMILY SSF47323 416 540 1.24E-30 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 Gene3D G3DSA:3.40.50.620 124 415 3.9E-124 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 Gene3D G3DSA:3.30.1360.70 5 111 9.9E-20 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 SMART SM00836 421 540 3.7E-40 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 Gene3D G3DSA:1.10.730.10 416 540 3.9E-124 T 14-10-2018 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 SUPERFAMILY SSF52374 119 431 7.88E-63 T 14-10-2018 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 PRINTS PR01038 Arginyl-tRNA synthetase signature 123 138 2.1E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 PRINTS PR01038 Arginyl-tRNA synthetase signature 289 310 2.1E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 PRINTS PR01038 Arginyl-tRNA synthetase signature 138 154 2.1E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 PRINTS PR01038 Arginyl-tRNA synthetase signature 162 175 2.1E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 Pfam PF00750 tRNA synthetases class I (R) 255 405 2.6E-6 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 Afer_1815 4fc21b627c8f33c309f005056cfb060f 540 SMART SM01016 9 94 4.3E-23 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Afer_1499 db72e32cffd5426bda3d19c6c60f5368 156 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 153 15.727 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Afer_1499 db72e32cffd5426bda3d19c6c60f5368 156 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 128 4.1E-20 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 Afer_1499 db72e32cffd5426bda3d19c6c60f5368 156 Gene3D G3DSA:2.40.30.60 4 88 3.5E-18 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 Afer_1499 db72e32cffd5426bda3d19c6c60f5368 156 SUPERFAMILY SSF50447 5 87 6.36E-15 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_1499 db72e32cffd5426bda3d19c6c60f5368 156 Pfam PF01782 RimM N-terminal domain 7 83 1.5E-15 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 39 169 2.3E-22 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 TIGRFAM TIGR01083 nth: endonuclease III 7 199 7.9E-70 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 SUPERFAMILY SSF48150 8 213 7.07E-68 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 Gene3D G3DSA:1.10.340.30 23 137 4.0E-73 T 14-10-2018 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 Gene3D G3DSA:1.10.1670.10 15 208 4.0E-73 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 Hamap MF_00942 Endonuclease III [nth]. 1 214 37.695 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 SMART SM00478 43 190 6.3E-54 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 PIRSF PIRSF001435 3 214 2.8E-46 T 14-10-2018 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 5.0E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 ProSitePatterns PS01155 Endonuclease III family signature. 107 134 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 Afer_1461 499f75255f76f4a60e3667f6582378c7 216 Pfam PF00633 Helix-hairpin-helix motif 104 132 7.4E-9 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 Afer_1350 b5310da7b082127d26e85cb338ab4cdf 255 SMART SM00563 43 155 3.3E-30 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Afer_1350 b5310da7b082127d26e85cb338ab4cdf 255 SUPERFAMILY SSF69593 27 217 5.36E-38 T 14-10-2018 Afer_1350 b5310da7b082127d26e85cb338ab4cdf 255 Pfam PF01553 Acyltransferase 31 152 1.3E-20 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Afer_1270 13cbcf1606a78f58661e98faad91dbc1 181 SUPERFAMILY SSF55486 12 169 8.79E-34 T 14-10-2018 Afer_1270 13cbcf1606a78f58661e98faad91dbc1 181 Gene3D G3DSA:3.40.390.30 7 168 4.2E-37 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 Afer_1270 13cbcf1606a78f58661e98faad91dbc1 181 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 45 166 7.6E-28 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Afer_1270 13cbcf1606a78f58661e98faad91dbc1 181 Pfam PF02130 Uncharacterized protein family UPF0054 25 165 2.1E-34 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Afer_1270 13cbcf1606a78f58661e98faad91dbc1 181 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 19 177 21.049 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 Afer_0198 7e85d7fdb4942a18d0ccf6ddc2dea1ee 408 SUPERFAMILY SSF54373 267 352 1.31E-8 T 14-10-2018 Afer_0198 7e85d7fdb4942a18d0ccf6ddc2dea1ee 408 SUPERFAMILY SSF51905 3 407 1.68E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0198 7e85d7fdb4942a18d0ccf6ddc2dea1ee 408 Gene3D G3DSA:3.50.50.60 4 67 3.3E-18 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0198 7e85d7fdb4942a18d0ccf6ddc2dea1ee 408 Pfam PF01266 FAD dependent oxidoreductase 3 390 1.1E-61 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Afer_0198 7e85d7fdb4942a18d0ccf6ddc2dea1ee 408 Gene3D G3DSA:3.50.50.60 113 390 1.4E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0198 7e85d7fdb4942a18d0ccf6ddc2dea1ee 408 Gene3D G3DSA:3.30.9.10 130 352 1.4E-41 T 14-10-2018 Afer_1304 36ca77392d6126745a92bc79573c62eb 281 SUPERFAMILY SSF51717 13 277 2.49E-79 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_1304 36ca77392d6126745a92bc79573c62eb 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 23 276 1.5E-78 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Afer_1304 36ca77392d6126745a92bc79573c62eb 281 Pfam PF00809 Pterin binding enzyme 24 262 4.8E-64 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_1304 36ca77392d6126745a92bc79573c62eb 281 Gene3D G3DSA:3.20.20.20 9 281 1.1E-83 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0540 e9000510ff4fdcfa6a9108bc5bc49fa4 180 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 5 166 3.0E-24 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Afer_0540 e9000510ff4fdcfa6a9108bc5bc49fa4 180 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 165 1.3E-37 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 Afer_0540 e9000510ff4fdcfa6a9108bc5bc49fa4 180 Gene3D G3DSA:2.60.120.10 2 174 3.0E-50 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Afer_0540 e9000510ff4fdcfa6a9108bc5bc49fa4 180 SUPERFAMILY SSF51182 4 168 3.32E-46 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Afer_0306 f34c09863494edffbf23649e806a2658 446 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 446 32.191 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 SMART SM00840 336 397 6.8E-7 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 17 311 1.7E-101 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 Gene3D G3DSA:3.40.50.620 1 302 4.4E-104 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0306 f34c09863494edffbf23649e806a2658 446 Pfam PF09190 DALR domain 336 389 4.3E-8 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 Gene3D G3DSA:1.20.120.640 304 444 3.3E-23 T 14-10-2018 Afer_0306 f34c09863494edffbf23649e806a2658 446 SUPERFAMILY SSF47323 333 442 3.79E-22 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0306 f34c09863494edffbf23649e806a2658 446 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 4.2E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 4.2E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 4.2E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 221 242 4.2E-23 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 442 1.8E-121 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 Afer_0306 f34c09863494edffbf23649e806a2658 446 SUPERFAMILY SSF52374 2 310 1.42E-72 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 Pfam PF01751 Toprim domain 433 541 6.3E-15 T 14-10-2018 IPR006171 TOPRIM domain Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 SUPERFAMILY SSF56719 408 640 4.18E-75 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 SMART SM00433 45 640 1.5E-298 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 Gene3D G3DSA:3.30.230.10 237 412 1.4E-66 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 SUPERFAMILY SSF55874 16 226 7.99E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 187 9.8E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 SUPERFAMILY SSF54211 235 405 3.03E-54 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 Pfam PF00204 DNA gyrase B 235 404 1.9E-58 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 Gene3D G3DSA:3.30.565.10 25 236 1.1E-82 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 Gene3D G3DSA:3.40.50.670 413 646 4.8E-88 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 600 612 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 234 256 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 616 632 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 326 342 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 374 388 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 16 26 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 208 221 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 193 208 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 388 408 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR01159 DNA gyrase subunit B signature 484 493 5.5E-60 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 SMART SM00387 41 188 5.8E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 ProSitePatterns PS00177 DNA topoisomerase II signature. 436 444 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 580 636 6.7E-20 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 80 93 1.7E-58 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 282 295 1.7E-58 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 518 535 1.7E-58 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 434 448 1.7E-58 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 500 516 1.7E-58 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 45 60 1.7E-58 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 124 138 1.7E-58 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 538 550 1.7E-58 T 14-10-2018 Afer_0005 4b674203d32ff1dddfc0cec551a7261a 647 PRINTS PR00418 DNA topoisomerase II family signature 579 595 1.7E-58 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 SUPERFAMILY SSF55424 345 467 2.23E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 Gene3D G3DSA:3.50.50.60 11 335 1.7E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 4.7E-34 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 4.7E-34 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 4.7E-34 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 4.7E-34 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 4.7E-34 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 Gene3D G3DSA:3.50.50.60 155 276 1.7E-95 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 329 3.1E-56 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 SUPERFAMILY SSF51905 8 339 3.7E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PIRSF PIRSF000350 3 459 1.5E-73 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 466 1.1E-136 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 Gene3D G3DSA:3.30.390.30 347 466 7.1E-38 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.1E-70 T 14-10-2018 Afer_0826 9ef5a26c428b000f564f121fa4fb321a 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 456 4.1E-32 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Afer_1850 2425b8fff6290bb250573c979f318951 267 Pfam PF02358 Trehalose-phosphatase 21 200 1.8E-16 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 Afer_1850 2425b8fff6290bb250573c979f318951 267 SUPERFAMILY SSF56784 18 214 2.76E-21 T 14-10-2018 IPR036412 HAD-like superfamily Afer_1850 2425b8fff6290bb250573c979f318951 267 Gene3D G3DSA:3.30.70.1020 91 163 7.6E-29 T 14-10-2018 Afer_1850 2425b8fff6290bb250573c979f318951 267 Gene3D G3DSA:3.40.50.1000 19 199 7.6E-29 T 14-10-2018 IPR023214 HAD superfamily Afer_1662 b03a952ae7f7f02c673783bfca173ebe 388 Gene3D G3DSA:3.40.640.10 49 293 9.1E-116 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1662 b03a952ae7f7f02c673783bfca173ebe 388 Gene3D G3DSA:3.90.1150.10 17 374 9.1E-116 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1662 b03a952ae7f7f02c673783bfca173ebe 388 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 211 248 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1662 b03a952ae7f7f02c673783bfca173ebe 388 PIRSF PIRSF000521 16 116 1.6E-10 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1662 b03a952ae7f7f02c673783bfca173ebe 388 PIRSF PIRSF000521 157 384 5.2E-18 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1662 b03a952ae7f7f02c673783bfca173ebe 388 PIRSF PIRSF000521 112 148 8.9E-4 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1662 b03a952ae7f7f02c673783bfca173ebe 388 Pfam PF00202 Aminotransferase class-III 17 381 5.4E-91 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1662 b03a952ae7f7f02c673783bfca173ebe 388 SUPERFAMILY SSF53383 8 382 7.5E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_2029 6542311c4218a5836ebe583148ca3596 1230 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 Gene3D G3DSA:3.40.50.300 974 1227 4.7E-85 T 14-10-2018 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 Gene3D G3DSA:3.40.50.300 342 589 6.2E-75 T 14-10-2018 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 SUPERFAMILY SSF90123 650 963 4.05E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 Pfam PF00664 ABC transporter transmembrane region 665 935 4.1E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 Pfam PF00664 ABC transporter transmembrane region 37 299 5.9E-32 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 Pfam PF00005 ABC transporter 365 513 1.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 ProSitePatterns PS00211 ABC transporters family signature. 1119 1133 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 SUPERFAMILY SSF52540 345 578 1.3E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_2029 6542311c4218a5836ebe583148ca3596 1230 SUPERFAMILY SSF52540 971 1214 9.32E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_2029 6542311c4218a5836ebe583148ca3596 1230 SMART SM00382 1007 1193 5.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_2029 6542311c4218a5836ebe583148ca3596 1230 SMART SM00382 373 559 7.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_2029 6542311c4218a5836ebe583148ca3596 1230 SUPERFAMILY SSF90123 25 338 8.5E-61 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 Gene3D G3DSA:1.20.1560.10 22 329 1.1E-63 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 Gene3D G3DSA:1.20.1560.10 634 966 5.4E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_2029 6542311c4218a5836ebe583148ca3596 1230 Pfam PF00005 ABC transporter 998 1147 6.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 Gene3D G3DSA:1.10.1050.10 6 208 1.3E-74 T 14-10-2018 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 SMART SM00363 99 163 2.9E-17 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 98 8.6E-29 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 Pfam PF01479 S4 domain 100 146 1.6E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 Gene3D G3DSA:3.10.290.10 98 193 1.3E-74 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 208 4.6E-63 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 SUPERFAMILY SSF55174 3 208 1.96E-60 T 14-10-2018 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 208 32.101 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 SMART SM01390 3 98 9.5E-45 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 Afer_0425 48425ea90bd1468dfd2ad45beb8da0c0 208 ProSitePatterns PS00632 Ribosomal protein S4 signature. 97 121 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0146 a1cb68c35311352479d8bbe7de08d0b1 75 Pfam PF06289 Flagellar protein (FlbD) 2 59 9.5E-25 T 14-10-2018 IPR009384 Swarming motility protein SwrD-like Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 49 329 4.4E-33 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 SMART SM01063 1096 1180 0.0011 T 14-10-2018 IPR019028 Carbohydrate binding domain CBM49 GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 SMART SM01063 976 1060 0.0022 T 14-10-2018 IPR019028 Carbohydrate binding domain CBM49 GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 Gene3D G3DSA:3.20.20.80 622 938 2.5E-96 T 14-10-2018 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 Pfam PF00553 Cellulose binding domain 1097 1189 1.2E-21 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 Pfam PF00553 Cellulose binding domain 980 1074 1.5E-20 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 SUPERFAMILY SSF51445 645 903 8.73E-18 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 183 192 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 SMART SM00637 976 1077 2.1E-29 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 SMART SM00637 1096 1194 1.7E-32 T 14-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 ProSitePatterns PS00561 CBM2a (carbohydrate-binding type-2) domain signature. 1161 1174 - T 14-10-2018 IPR018366 Carbohydrate-binding type-2, conserved site GO:0004553|GO:0005975|GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 ProSitePatterns PS00561 CBM2a (carbohydrate-binding type-2) domain signature. 1041 1054 - T 14-10-2018 IPR018366 Carbohydrate-binding type-2, conserved site GO:0004553|GO:0005975|GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 SUPERFAMILY SSF51445 39 339 1.81E-47 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 Gene3D G3DSA:2.60.40.290 1094 1194 6.1E-27 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 Gene3D G3DSA:2.60.40.290 975 1079 4.6E-27 T 14-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 SUPERFAMILY SSF49384 972 1065 8.37E-27 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 Gene3D G3DSA:3.20.20.80 23 347 8.4E-61 T 14-10-2018 Afer_2006 26f44d6e042babe6ed42946cdf84a114 1194 SUPERFAMILY SSF49384 1090 1184 9.77E-28 T 14-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 Afer_1498 d1a71b61d9308cee41875e182fd1ac74 255 Gene3D G3DSA:3.40.1280.10 1 161 2.9E-57 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Afer_1498 d1a71b61d9308cee41875e182fd1ac74 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 221 2.3E-76 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Afer_1498 d1a71b61d9308cee41875e182fd1ac74 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 89.274 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Afer_1498 d1a71b61d9308cee41875e182fd1ac74 255 Gene3D G3DSA:1.10.1270.20 162 251 1.8E-29 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Afer_1498 d1a71b61d9308cee41875e182fd1ac74 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 218 7.7E-52 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Afer_1498 d1a71b61d9308cee41875e182fd1ac74 255 SUPERFAMILY SSF75217 1 224 1.24E-81 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Afer_1498 d1a71b61d9308cee41875e182fd1ac74 255 PIRSF PIRSF000386 1 244 1.1E-83 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 524 3.5E-96 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 Gene3D G3DSA:1.10.560.10 7 520 5.9E-227 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 PRINTS PR00298 60kDa chaperonin signature 348 373 1.0E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 PRINTS PR00298 60kDa chaperonin signature 396 417 1.0E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 PRINTS PR00298 60kDa chaperonin signature 26 52 1.0E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 PRINTS PR00298 60kDa chaperonin signature 266 289 1.0E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 PRINTS PR00298 60kDa chaperonin signature 82 109 1.0E-71 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 Hamap MF_00600 60 kDa chaperonin [groL]. 1 543 41.472 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 Gene3D G3DSA:3.30.260.10 135 408 5.9E-227 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 SUPERFAMILY SSF48592 6 520 8.33E-77 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 Gene3D G3DSA:3.50.7.10 190 370 5.9E-227 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 2.3E-252 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 SUPERFAMILY SSF54849 136 202 1.01E-22 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily Afer_0444 1e1856bd4e2c0707717cded6af8ee8d2 544 SUPERFAMILY SSF52029 184 374 1.44E-81 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily Afer_2032 33ef4d7c3d57491167906d0714ceb91a 508 Pfam PF13751 Transposase DDE domain 381 492 3.8E-24 T 14-10-2018 IPR025668 Transposase DDE domain Afer_2032 33ef4d7c3d57491167906d0714ceb91a 508 Pfam PF05598 Transposase domain (DUF772) 53 125 1.5E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PIRSF PIRSF000350 1 461 2.0E-60 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 SUPERFAMILY SSF51905 3 334 1.3E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0293 4096cca55eef3ddb94478be279878cc7 462 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 1.5E-28 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.1E-22 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 4.1E-22 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 4.1E-22 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 4.1E-22 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 SUPERFAMILY SSF55424 346 459 3.78E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 Gene3D G3DSA:3.30.390.30 346 461 2.0E-34 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 Gene3D G3DSA:3.50.50.60 151 274 1.8E-72 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0293 4096cca55eef3ddb94478be279878cc7 462 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 325 9.9E-45 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 Gene3D G3DSA:3.50.50.60 8 324 1.8E-72 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 2.0E-55 T 14-10-2018 Afer_0293 4096cca55eef3ddb94478be279878cc7 462 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 Gene3D G3DSA:3.40.50.620 21 646 5.3E-223 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 Gene3D G3DSA:3.90.740.10 207 416 5.3E-223 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 Gene3D G3DSA:1.10.730.10 663 845 3.4E-45 T 14-10-2018 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 56 67 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 SUPERFAMILY SSF52374 12 651 9.06E-124 T 14-10-2018 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 SUPERFAMILY SSF50677 213 412 1.57E-44 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 12 858 1.2E-250 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 Pfam PF08264 Anticodon-binding domain of tRNA 705 852 4.8E-26 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 6 1049 13.706 T 14-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 SUPERFAMILY SSF47323 673 910 5.42E-43 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 1.1E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 410 425 1.1E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 49 60 1.1E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 539 552 1.1E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 579 588 1.1E-30 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 Afer_1212 1e4771d6c28c3ed526053d9d60f983ef 1072 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 24 655 5.2E-184 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Pfam PF02779 Transketolase, pyrimidine binding domain 347 514 8.0E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Gene3D G3DSA:3.40.50.920 530 663 7.9E-27 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Gene3D G3DSA:3.40.50.970 1 330 4.8E-105 T 14-10-2018 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 SUPERFAMILY SSF52922 530 655 1.83E-28 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 667 968 3.1E-93 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 323 5.5E-125 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 SMART SM00861 347 517 8.8E-61 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Afer_0166 5d136c89f87c298f51803bf3097faffb 976 SUPERFAMILY SSF52518 5 317 8.45E-98 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0166 5d136c89f87c298f51803bf3097faffb 976 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 SUPERFAMILY SSF56655 666 968 1.74E-61 T 14-10-2018 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Gene3D G3DSA:3.40.190.90 771 926 4.4E-84 T 14-10-2018 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 TIGRFAM TIGR00232 tktlase_bact: transketolase 8 654 1.9E-213 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 SUPERFAMILY SSF52518 339 516 6.48E-59 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Pfam PF02780 Transketolase, C-terminal domain 539 582 8.4E-7 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Gene3D G3DSA:3.30.540.10 670 967 4.4E-84 T 14-10-2018 Afer_0166 5d136c89f87c298f51803bf3097faffb 976 Gene3D G3DSA:3.40.50.970 331 522 1.1E-64 T 14-10-2018 Afer_0841 edfabaf99a4444b990fc39da2d2a0fac 66 SUPERFAMILY SSF50249 10 63 2.4E-7 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1720 261db558d437626f43d98ad4c4640a27 239 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 133 143 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Afer_1720 261db558d437626f43d98ad4c4640a27 239 Pfam PF13350 Tyrosine phosphatase family 13 238 3.6E-46 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Afer_1720 261db558d437626f43d98ad4c4640a27 239 SUPERFAMILY SSF52799 13 237 2.58E-40 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Afer_1720 261db558d437626f43d98ad4c4640a27 239 Gene3D G3DSA:3.90.190.10 12 238 2.8E-48 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Afer_1462 f639c098a458b08c351606105a9eb1bd 310 Gene3D G3DSA:3.40.630.30 2 303 2.1E-68 T 14-10-2018 Afer_1462 f639c098a458b08c351606105a9eb1bd 310 Pfam PF00583 Acetyltransferase (GNAT) family 196 293 2.0E-13 T 14-10-2018 IPR000182 GNAT domain Afer_1462 f639c098a458b08c351606105a9eb1bd 310 SUPERFAMILY SSF55729 6 298 2.26E-38 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_1462 f639c098a458b08c351606105a9eb1bd 310 Hamap MF_01698 Mycothiol acetyltransferase [mshD]. 4 304 29.275 T 14-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 Afer_1462 f639c098a458b08c351606105a9eb1bd 310 TIGRFAM TIGR03448 mycothiol_MshD: mycothiol synthase 16 300 2.2E-61 T 14-10-2018 IPR017813 Mycothiol acetyltransferase GO:0016747 Afer_1259 c6cc88d7b0b88487e8b5ec14d35cec16 211 SMART SM00014 62 175 6.7E-16 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Afer_1259 c6cc88d7b0b88487e8b5ec14d35cec16 211 Pfam PF01569 PAP2 superfamily 68 176 3.7E-19 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Afer_1259 c6cc88d7b0b88487e8b5ec14d35cec16 211 SUPERFAMILY SSF48317 12 176 2.22E-30 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Afer_1259 c6cc88d7b0b88487e8b5ec14d35cec16 211 Gene3D G3DSA:1.20.144.10 96 185 1.4E-16 T 14-10-2018 Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 Pfam PF13662 Toprim domain 82 171 5.1E-23 T 14-10-2018 IPR006171 TOPRIM domain Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 Pfam PF02132 RecR protein 41 79 4.1E-11 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 SMART SM00278 13 32 0.0052 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 SMART SM00493 81 166 4.1E-10 T 14-10-2018 IPR006171 TOPRIM domain Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 92.234 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 TIGRFAM TIGR00615 recR: recombination protein RecR 5 196 7.4E-70 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 Gene3D G3DSA:3.40.1360.10 78 197 7.0E-40 T 14-10-2018 Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 Gene3D G3DSA:1.10.8.420 2 53 6.1E-16 T 14-10-2018 Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 ProSitePatterns PS01300 RecR protein signature. 58 79 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 Afer_0103 849e98cc038da4fa03ee67a285b65c47 205 SUPERFAMILY SSF111304 5 199 5.23E-66 T 14-10-2018 IPR023627 Recombination protein RecR Afer_1250 740e7df27e35285ff53fafc7f7c6e650 592 Gene3D G3DSA:3.40.710.10 288 481 7.9E-90 T 14-10-2018 Afer_1250 740e7df27e35285ff53fafc7f7c6e650 592 Pfam PF03717 Penicillin-binding Protein dimerisation domain 49 195 8.2E-8 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Afer_1250 740e7df27e35285ff53fafc7f7c6e650 592 SUPERFAMILY SSF56519 46 214 3.66E-28 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Afer_1250 740e7df27e35285ff53fafc7f7c6e650 592 Gene3D G3DSA:3.30.450.330 216 563 7.9E-90 T 14-10-2018 Afer_1250 740e7df27e35285ff53fafc7f7c6e650 592 SUPERFAMILY SSF56601 165 570 1.5E-77 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Afer_1250 740e7df27e35285ff53fafc7f7c6e650 592 Gene3D G3DSA:3.90.1310.30 43 214 6.8E-27 T 14-10-2018 Afer_1250 740e7df27e35285ff53fafc7f7c6e650 592 Pfam PF00905 Penicillin binding protein transpeptidase domain 241 559 2.1E-61 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Afer_0778 5c760ef9a899037ef12062e0338599ae 238 SMART SM00382 28 233 4.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0778 5c760ef9a899037ef12062e0338599ae 238 SUPERFAMILY SSF52540 2 231 9.69E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0778 5c760ef9a899037ef12062e0338599ae 238 Pfam PF00005 ABC transporter 20 159 2.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0778 5c760ef9a899037ef12062e0338599ae 238 Gene3D G3DSA:3.40.50.300 2 234 1.1E-50 T 14-10-2018 Afer_0427 cf5c2cc2166500666b0d5144987ceb09 118 ProSitePatterns PS01167 Ribosomal protein L17 signature. 36 58 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0427 cf5c2cc2166500666b0d5144987ceb09 118 TIGRFAM TIGR00059 L17: ribosomal protein bL17 10 118 7.4E-41 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0427 cf5c2cc2166500666b0d5144987ceb09 118 Gene3D G3DSA:3.90.1030.10 5 118 8.4E-44 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0427 cf5c2cc2166500666b0d5144987ceb09 118 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 7 118 26.512 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0427 cf5c2cc2166500666b0d5144987ceb09 118 SUPERFAMILY SSF64263 6 118 1.31E-42 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0427 cf5c2cc2166500666b0d5144987ceb09 118 Pfam PF01196 Ribosomal protein L17 22 118 8.5E-35 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 Pfam PF00152 tRNA synthetases class II (D, K and N) 142 477 1.8E-76 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 SUPERFAMILY SSF50249 41 130 3.62E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 SUPERFAMILY SSF55681 141 478 1.03E-109 T 14-10-2018 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 362 378 1.6E-37 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 241 258 1.6E-37 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 194 210 1.6E-37 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 178 188 1.6E-37 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 PRINTS PR00982 Lysyl-tRNA synthetase signature 223 236 1.6E-37 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 Pfam PF01336 OB-fold nucleic acid binding domain 49 125 1.4E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 5 480 38.28 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 45 480 8.1E-159 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 Gene3D G3DSA:3.30.930.10 137 496 5.3E-124 T 14-10-2018 Afer_1906 fadd8b3eea711df994dfb2c8e1e389f4 498 Gene3D G3DSA:2.40.50.140 6 134 8.8E-22 T 14-10-2018 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 498 1.2E-230 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 358 367 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 SUPERFAMILY SSF47917 375 500 5.76E-41 T 14-10-2018 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 374 496 1.1E-43 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 Gene3D G3DSA:2.40.30.20 4 96 1.4E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 Gene3D G3DSA:1.20.150.20 375 499 7.8E-46 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 Gene3D G3DSA:3.40.50.300 97 374 1.6E-119 T 14-10-2018 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 502 47.73 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 SUPERFAMILY SSF52540 99 373 1.06E-95 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 152 367 7.8E-68 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 30 95 3.5E-10 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1797 39ecbbd1849d2c48a9d29d89ef9bb752 504 SUPERFAMILY SSF50615 14 97 2.35E-23 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_0716 5e2f93228166894ab893bbaf98beb955 306 SUPERFAMILY SSF51430 4 298 1.09E-77 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Afer_0716 5e2f93228166894ab893bbaf98beb955 306 Gene3D G3DSA:3.20.20.100 1 305 9.9E-85 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Afer_0716 5e2f93228166894ab893bbaf98beb955 306 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 131 148 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 Afer_0716 5e2f93228166894ab893bbaf98beb955 306 Pfam PF00248 Aldo/keto reductase family 14 297 3.4E-63 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Afer_0716 5e2f93228166894ab893bbaf98beb955 306 PRINTS PR00069 Aldo-keto reductase signature 44 68 1.3E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Afer_0716 5e2f93228166894ab893bbaf98beb955 306 PRINTS PR00069 Aldo-keto reductase signature 100 118 1.3E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Afer_0716 5e2f93228166894ab893bbaf98beb955 306 PRINTS PR00069 Aldo-keto reductase signature 131 148 1.3E-8 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Afer_0788 90803d90355ab40938e7fcae3edf1134 189 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 187 1.0E-23 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 Afer_0788 90803d90355ab40938e7fcae3edf1134 189 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 13 185 1.5E-19 T 14-10-2018 IPR011978 Uncharacterised protein family UPF0149 Afer_0788 90803d90355ab40938e7fcae3edf1134 189 SUPERFAMILY SSF101327 12 182 2.48E-15 T 14-10-2018 IPR036255 YgfB-like superfamily Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 SMART SM00382 99 268 5.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 422 1.6E-159 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 SMART SM00962 100 293 1.2E-98 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 266 279 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 Pfam PF02978 Signal peptide binding domain 325 420 5.3E-30 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 Gene3D G3DSA:1.20.120.140 5 303 5.0E-115 T 14-10-2018 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 Gene3D G3DSA:3.40.50.300 90 282 5.0E-115 T 14-10-2018 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 432 31.734 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 Pfam PF00448 SRP54-type protein, GTPase domain 100 293 2.5E-68 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 2.0E-20 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 SUPERFAMILY SSF47446 324 423 1.23E-29 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 Gene3D G3DSA:1.10.260.30 308 435 5.6E-37 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 SMART SM00963 1 86 7.6E-27 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1502 03812357c0855e4aa9b24dfae9270cad 443 SUPERFAMILY SSF52540 42 351 3.87E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0154 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF13276 HTH-like domain 50 101 8.3E-19 T 14-10-2018 IPR025948 HTH-like domain Afer_0154 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF00665 Integrase core domain 126 239 1.7E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0154 296438e2179471e2eb9d91ba63cd0e68 292 SUPERFAMILY SSF53098 120 282 4.25E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0154 296438e2179471e2eb9d91ba63cd0e68 292 Gene3D G3DSA:3.30.420.10 134 273 1.5E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1316 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF13276 HTH-like domain 50 101 8.3E-19 T 14-10-2018 IPR025948 HTH-like domain Afer_1316 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF00665 Integrase core domain 126 239 1.7E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_1316 296438e2179471e2eb9d91ba63cd0e68 292 SUPERFAMILY SSF53098 120 282 4.25E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1316 296438e2179471e2eb9d91ba63cd0e68 292 Gene3D G3DSA:3.30.420.10 134 273 1.5E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1775 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF13276 HTH-like domain 50 101 8.3E-19 T 14-10-2018 IPR025948 HTH-like domain Afer_1775 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF00665 Integrase core domain 126 239 1.7E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_1775 296438e2179471e2eb9d91ba63cd0e68 292 SUPERFAMILY SSF53098 120 282 4.25E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1775 296438e2179471e2eb9d91ba63cd0e68 292 Gene3D G3DSA:3.30.420.10 134 273 1.5E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0519 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF13276 HTH-like domain 50 101 8.3E-19 T 14-10-2018 IPR025948 HTH-like domain Afer_0519 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF00665 Integrase core domain 126 239 1.7E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0519 296438e2179471e2eb9d91ba63cd0e68 292 SUPERFAMILY SSF53098 120 282 4.25E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0519 296438e2179471e2eb9d91ba63cd0e68 292 Gene3D G3DSA:3.30.420.10 134 273 1.5E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0979 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF13276 HTH-like domain 50 101 8.3E-19 T 14-10-2018 IPR025948 HTH-like domain Afer_0979 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF00665 Integrase core domain 126 239 1.7E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0979 296438e2179471e2eb9d91ba63cd0e68 292 SUPERFAMILY SSF53098 120 282 4.25E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0979 296438e2179471e2eb9d91ba63cd0e68 292 Gene3D G3DSA:3.30.420.10 134 273 1.5E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0301 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF13276 HTH-like domain 50 101 8.3E-19 T 14-10-2018 IPR025948 HTH-like domain Afer_0301 296438e2179471e2eb9d91ba63cd0e68 292 Pfam PF00665 Integrase core domain 126 239 1.7E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0301 296438e2179471e2eb9d91ba63cd0e68 292 SUPERFAMILY SSF53098 120 282 4.25E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0301 296438e2179471e2eb9d91ba63cd0e68 292 Gene3D G3DSA:3.30.420.10 134 273 1.5E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0255 acc84e303e1d7039b82e67a37ea26c65 297 TIGRFAM TIGR01929 menB: naphthoate synthase 25 293 1.4E-115 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Afer_0255 acc84e303e1d7039b82e67a37ea26c65 297 Gene3D G3DSA:1.10.12.10 237 285 1.2E-22 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Afer_0255 acc84e303e1d7039b82e67a37ea26c65 297 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 16 296 50.451 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 Afer_0255 acc84e303e1d7039b82e67a37ea26c65 297 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 291 3.7E-52 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_0255 acc84e303e1d7039b82e67a37ea26c65 297 SUPERFAMILY SSF52096 21 292 4.23E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0255 acc84e303e1d7039b82e67a37ea26c65 297 Gene3D G3DSA:3.90.226.10 9 236 4.4E-80 T 14-10-2018 Afer_1100 b3669525210108f37225bc4f10561370 461 Gene3D G3DSA:1.10.287.130 174 291 6.7E-22 T 14-10-2018 Afer_1100 b3669525210108f37225bc4f10561370 461 SMART SM00388 231 295 1.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_1100 b3669525210108f37225bc4f10561370 461 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 294 6.5E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_1100 b3669525210108f37225bc4f10561370 461 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 341 450 2.6E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_1100 b3669525210108f37225bc4f10561370 461 SUPERFAMILY SSF55874 285 454 3.67E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1100 b3669525210108f37225bc4f10561370 461 SUPERFAMILY SSF47384 214 295 9.02E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Afer_1100 b3669525210108f37225bc4f10561370 461 SMART SM00387 341 452 6.0E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_1100 b3669525210108f37225bc4f10561370 461 Gene3D G3DSA:3.30.565.10 299 451 9.5E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1100 b3669525210108f37225bc4f10561370 461 SMART SM00304 176 230 0.0069 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Afer_1100 b3669525210108f37225bc4f10561370 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 449 2.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_1100 b3669525210108f37225bc4f10561370 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 390 2.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_1100 b3669525210108f37225bc4f10561370 461 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 2.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 PRINTS PR00379 Intein signature 745 754 3.1E-20 T 14-10-2018 IPR006142 Intein GO:0016539 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 PRINTS PR00379 Intein signature 421 434 3.1E-20 T 14-10-2018 IPR006142 Intein GO:0016539 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 PRINTS PR00379 Intein signature 727 744 3.1E-20 T 14-10-2018 IPR006142 Intein GO:0016539 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 PRINTS PR00379 Intein signature 496 508 3.1E-20 T 14-10-2018 IPR006142 Intein GO:0016539 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 PRINTS PR00379 Intein signature 596 608 3.1E-20 T 14-10-2018 IPR006142 Intein GO:0016539 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 PRINTS PR00379 Intein signature 627 642 3.1E-20 T 14-10-2018 IPR006142 Intein GO:0016539 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 SMART SM00306 349 455 2.0E-11 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 Pfam PF14528 LAGLIDADG-like domain 596 691 3.0E-23 T 14-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 38 121 4.6E-23 T 14-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 SUPERFAMILY SSF51294 350 750 1.57E-23 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 Gene3D G3DSA:3.10.28.10 493 659 3.9E-27 T 14-10-2018 IPR027434 Homing endonuclease Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 Pfam PF14890 Intein splicing domain 404 748 1.2E-9 T 14-10-2018 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 Gene3D G3DSA:3.20.70.20 43 349 1.1E-85 T 14-10-2018 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 Gene3D G3DSA:3.20.70.20 730 1091 2.3E-105 T 14-10-2018 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 SUPERFAMILY SSF55608 582 705 7.87E-17 T 14-10-2018 IPR027434 Homing endonuclease Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 351 434 1.1E-6 T 14-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 Pfam PF02867 Ribonucleotide reductase, barrel domain 143 1075 2.0E-133 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 Gene3D G3DSA:2.170.16.10 350 473 3.7E-16 T 14-10-2018 Afer_1025 f8a1d28b0bafb7423568943c879e269c 1331 SUPERFAMILY SSF51998 143 1087 5.72E-124 T 14-10-2018 Afer_1935 ed8e81edfdbbf68158044999d65bc663 383 Gene3D G3DSA:3.90.1150.10 9 369 8.4E-121 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1935 ed8e81edfdbbf68158044999d65bc663 383 SUPERFAMILY SSF53383 4 373 4.39E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1935 ed8e81edfdbbf68158044999d65bc663 383 Pfam PF00155 Aminotransferase class I and II 18 365 7.1E-59 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Afer_1935 ed8e81edfdbbf68158044999d65bc663 383 Gene3D G3DSA:3.40.640.10 32 269 8.4E-121 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 4 245 1.1E-86 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 SUPERFAMILY SSF55920 2 250 8.51E-84 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Afer_0420 38589f94dda329e1a3594be1bd6da483 251 PRINTS PR00599 Methionine aminopeptidase-1 signature 189 201 4.4E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 PRINTS PR00599 Methionine aminopeptidase-1 signature 65 78 4.4E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 4.4E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 4.4E-21 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 Gene3D G3DSA:3.90.230.10 2 249 8.9E-96 T 14-10-2018 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 Pfam PF00557 Metallopeptidase family M24 10 238 7.1E-53 T 14-10-2018 IPR000994 Peptidase M24 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 Hamap MF_01974 Methionine aminopeptidase [map]. 1 247 38.658 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_0420 38589f94dda329e1a3594be1bd6da483 251 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 164 182 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_0684 2be24bcef553ded5afae0d601eac9b66 199 SMART SM00507 71 120 9.9E-15 T 14-10-2018 IPR003615 HNH nuclease Afer_0684 2be24bcef553ded5afae0d601eac9b66 199 Gene3D G3DSA:3.30.40.60 58 145 2.7E-20 T 14-10-2018 Afer_0684 2be24bcef553ded5afae0d601eac9b66 199 Pfam PF14279 HNH endonuclease 84 133 4.3E-14 T 14-10-2018 IPR029471 HNH endonuclease 5 Afer_1966 a88ef3ce6c00a8f30aa1dbe6be211e7d 279 Pfam PF01380 SIS domain 127 250 4.0E-12 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Afer_1966 a88ef3ce6c00a8f30aa1dbe6be211e7d 279 SUPERFAMILY SSF46689 1 78 4.84E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1966 a88ef3ce6c00a8f30aa1dbe6be211e7d 279 Gene3D G3DSA:3.40.50.10490 98 274 2.7E-22 T 14-10-2018 Afer_1966 a88ef3ce6c00a8f30aa1dbe6be211e7d 279 SUPERFAMILY SSF53697 102 270 1.11E-10 T 14-10-2018 Afer_1966 a88ef3ce6c00a8f30aa1dbe6be211e7d 279 Gene3D G3DSA:1.10.10.10 1 80 1.4E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1966 a88ef3ce6c00a8f30aa1dbe6be211e7d 279 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 75 3.3E-7 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Afer_1595 87369e8d13cdf0c00e7b32625288c007 192 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 13 26 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Afer_1595 87369e8d13cdf0c00e7b32625288c007 192 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 2 184 3.0E-50 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Afer_1595 87369e8d13cdf0c00e7b32625288c007 192 Gene3D G3DSA:3.40.50.1470 1 187 5.4E-59 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Afer_1595 87369e8d13cdf0c00e7b32625288c007 192 Pfam PF01195 Peptidyl-tRNA hydrolase 2 184 1.6E-49 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Afer_1595 87369e8d13cdf0c00e7b32625288c007 192 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 30.024 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 Afer_1595 87369e8d13cdf0c00e7b32625288c007 192 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 106 116 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 Afer_1595 87369e8d13cdf0c00e7b32625288c007 192 SUPERFAMILY SSF53178 2 184 2.88E-56 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 Afer_1567 65b9384578328258218cdbd53bd6ffd5 322 SMART SM00382 46 219 3.0E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1567 65b9384578328258218cdbd53bd6ffd5 322 SUPERFAMILY SSF52540 38 276 6.75E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1567 65b9384578328258218cdbd53bd6ffd5 322 Pfam PF07728 AAA domain (dynein-related subfamily) 49 209 1.5E-9 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Afer_1567 65b9384578328258218cdbd53bd6ffd5 322 Gene3D G3DSA:3.40.50.300 37 228 2.5E-24 T 14-10-2018 Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 Pfam PF00994 Probable molybdopterin binding domain 180 315 2.3E-26 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 Pfam PF03453 MoeA N-terminal region (domain I and II) 3 167 1.9E-36 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 Gene3D G3DSA:3.90.105.10 22 174 2.5E-122 T 14-10-2018 Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 Gene3D G3DSA:2.40.340.10 327 395 2.5E-122 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 SMART SM00852 180 316 4.3E-43 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 SUPERFAMILY SSF63867 325 402 9.68E-14 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 SUPERFAMILY SSF63882 2 176 1.27E-46 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 Gene3D G3DSA:3.40.980.10 175 326 2.5E-122 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 SUPERFAMILY SSF53218 177 321 6.67E-40 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 Gene3D G3DSA:2.170.190.11 44 141 2.5E-122 T 14-10-2018 Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 312 1.2E-31 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_0486 d2a0c907baaabf3db51782f408d17adf 417 Pfam PF03454 MoeA C-terminal region (domain IV) 330 399 6.6E-13 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 SUPERFAMILY SSF52540 3 265 4.39E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 Hamap MF_00268 Protein RecA [recA]. 3 327 51.697 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 Gene3D G3DSA:3.40.50.300 24 265 2.0E-81 T 14-10-2018 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 2 322 5.1E-170 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 SUPERFAMILY SSF54752 266 323 2.22E-19 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 ProSitePatterns PS00321 recA signature. 211 219 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 Gene3D G3DSA:3.30.250.10 266 340 4.9E-25 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 Pfam PF00154 recA bacterial DNA recombination protein 5 266 4.1E-140 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 PRINTS PR00142 RecA protein signature 208 236 8.8E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 PRINTS PR00142 RecA protein signature 125 154 8.8E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 PRINTS PR00142 RecA protein signature 91 120 8.8E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 PRINTS PR00142 RecA protein signature 295 312 8.8E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 PRINTS PR00142 RecA protein signature 163 192 8.8E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 PRINTS PR00142 RecA protein signature 241 270 8.8E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 Afer_0653 879ca92e18fa373e4c245f68cc0771a0 346 SMART SM00382 55 226 1.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 SUPERFAMILY SSF55347 176 460 3.27E-81 T 14-10-2018 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 Gene3D G3DSA:3.40.50.720 17 418 3.6E-145 T 14-10-2018 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 189 458 7.4E-80 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 16 461 2.5E-134 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 Gene3D G3DSA:3.30.360.10 176 451 3.6E-145 T 14-10-2018 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 18 182 9.2E-42 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 PIRSF PIRSF000110 10 466 3.9E-132 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 SUPERFAMILY SSF51735 16 189 3.28E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 6.9E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 6.9E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 313 339 6.9E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 6.9E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 6.9E-38 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1521 080b5dff449d57b790e467fe4e69d9c5 470 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 14 469 66.86 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0880 0fa02bacb97368169981716383774509 486 SUPERFAMILY SSF54373 218 307 3.66E-7 T 14-10-2018 Afer_0880 0fa02bacb97368169981716383774509 486 Gene3D G3DSA:1.10.10.1100 382 446 4.8E-6 T 14-10-2018 Afer_0880 0fa02bacb97368169981716383774509 486 Gene3D G3DSA:3.30.9.10 81 308 1.3E-57 T 14-10-2018 Afer_0880 0fa02bacb97368169981716383774509 486 Pfam PF01266 FAD dependent oxidoreductase 5 348 6.7E-39 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Afer_0880 0fa02bacb97368169981716383774509 486 SUPERFAMILY SSF51905 5 218 4.35E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0880 0fa02bacb97368169981716383774509 486 Gene3D G3DSA:3.50.50.60 6 355 1.3E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0880 0fa02bacb97368169981716383774509 486 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 301 307 2.0E-15 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Afer_0880 0fa02bacb97368169981716383774509 486 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 2.0E-15 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Afer_0880 0fa02bacb97368169981716383774509 486 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 2.0E-15 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Afer_0880 0fa02bacb97368169981716383774509 486 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 2.0E-15 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Afer_0880 0fa02bacb97368169981716383774509 486 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 337 349 2.0E-15 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Afer_0222 6550ce0028aea4352b849b956b0645fd 289 SUPERFAMILY SSF48179 188 288 1.11E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Afer_0222 6550ce0028aea4352b849b956b0645fd 289 Gene3D G3DSA:1.10.1040.10 187 289 1.4E-31 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Afer_0222 6550ce0028aea4352b849b956b0645fd 289 SUPERFAMILY SSF51735 4 186 8.7E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0222 6550ce0028aea4352b849b956b0645fd 289 Gene3D G3DSA:3.40.50.720 1 186 1.2E-57 T 14-10-2018 Afer_0222 6550ce0028aea4352b849b956b0645fd 289 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 8 185 5.0E-52 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Afer_0222 6550ce0028aea4352b849b956b0645fd 289 PIRSF PIRSF000105 2 289 2.7E-78 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Afer_0222 6550ce0028aea4352b849b956b0645fd 289 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 284 1.8E-29 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Afer_1396 aef9830df0080cc3d36f5747c6efe7eb 1065 Pfam PF00271 Helicase conserved C-terminal domain 744 802 1.8E-11 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1396 aef9830df0080cc3d36f5747c6efe7eb 1065 SMART SM00487 225 411 1.9E-4 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Afer_1396 aef9830df0080cc3d36f5747c6efe7eb 1065 Gene3D G3DSA:3.40.50.10810 227 448 1.3E-23 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily Afer_1396 aef9830df0080cc3d36f5747c6efe7eb 1065 Gene3D G3DSA:3.40.50.300 629 829 1.7E-28 T 14-10-2018 Afer_1396 aef9830df0080cc3d36f5747c6efe7eb 1065 SUPERFAMILY SSF52540 277 827 5.26E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1396 aef9830df0080cc3d36f5747c6efe7eb 1065 SMART SM00490 700 802 2.1E-10 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1396 aef9830df0080cc3d36f5747c6efe7eb 1065 Pfam PF00176 SNF2 family N-terminal domain 241 291 1.0E-6 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 Afer_1668 ea1c83554e47af30d2098156b0d27680 508 Pfam PF14403 Circularly permuted ATP-grasp type 2 80 452 1.3E-148 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 Afer_1668 ea1c83554e47af30d2098156b0d27680 508 Gene3D G3DSA:3.40.50.11290 218 315 7.1E-38 T 14-10-2018 Afer_1668 ea1c83554e47af30d2098156b0d27680 508 SUPERFAMILY SSF56059 64 468 4.88E-49 T 14-10-2018 Afer_1668 ea1c83554e47af30d2098156b0d27680 508 PIRSF PIRSF005522 7 479 2.7E-176 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 Afer_1668 ea1c83554e47af30d2098156b0d27680 508 Gene3D G3DSA:3.30.1490.270 352 412 6.7E-21 T 14-10-2018 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 SUPERFAMILY SSF55979 243 363 1.1E-17 T 14-10-2018 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 Gene3D G3DSA:3.10.150.10 2 239 5.9E-73 T 14-10-2018 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 SMART SM00480 17 361 6.7E-24 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 111 8.6E-12 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 SUPERFAMILY SSF55979 2 109 4.96E-11 T 14-10-2018 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 249 363 4.2E-14 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 363 1.2E-50 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 123 238 2.1E-18 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 SUPERFAMILY SSF55979 122 241 4.77E-13 T 14-10-2018 Afer_0002 ab8fc8b028d522888417c8ab0881b4cc 366 Gene3D G3DSA:3.70.10.10 131 363 5.9E-73 T 14-10-2018 Afer_1420 1b2976cf1aa58fcf7d7f18f78df9185d 158 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 13 152 4.6E-25 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 Afer_1420 1b2976cf1aa58fcf7d7f18f78df9185d 158 Pfam PF06841 T4-like virus tail tube protein gp19 16 152 4.4E-29 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 Afer_1435 6d39b5a36062192ba6307cf46bfda8c2 199 SUPERFAMILY SSF52317 4 189 1.53E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1435 6d39b5a36062192ba6307cf46bfda8c2 199 Gene3D G3DSA:3.40.50.880 1 199 7.7E-67 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1435 6d39b5a36062192ba6307cf46bfda8c2 199 Pfam PF01965 DJ-1/PfpI family 4 168 8.9E-26 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Afer_1881 026182f81c0a836d5862434d53b9f79d 407 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 21 394 4.3E-112 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Afer_1881 026182f81c0a836d5862434d53b9f79d 407 SMART SM01329 20 394 7.4E-173 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Afer_1881 026182f81c0a836d5862434d53b9f79d 407 SUPERFAMILY SSF53659 10 398 2.34E-130 T 14-10-2018 Afer_1881 026182f81c0a836d5862434d53b9f79d 407 Gene3D G3DSA:3.40.718.10 1 399 3.7E-157 T 14-10-2018 Afer_1881 026182f81c0a836d5862434d53b9f79d 407 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 283 302 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Afer_1881 026182f81c0a836d5862434d53b9f79d 407 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 10 397 1.9E-176 T 14-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 Pfam PF00717 Peptidase S24-like 115 174 4.0E-9 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 SUPERFAMILY SSF51306 77 199 1.74E-23 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 SUPERFAMILY SSF46785 9 70 6.53E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 Pfam PF01726 LexA DNA binding domain 11 65 4.3E-17 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 123 134 2.2E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 112 122 2.2E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 152 164 2.2E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 TIGRFAM TIGR00498 lexA: repressor LexA 10 201 6.8E-49 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 Gene3D G3DSA:1.10.10.10 6 70 4.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0668 d58d2348acb6564ae9bb8ecafdcd7006 207 Gene3D G3DSA:2.10.109.10 82 203 9.2E-25 T 14-10-2018 Afer_2022 1ba87b8dfd00a09173321c76e6d5995d 267 Gene3D G3DSA:1.10.580.10 34 238 7.8E-23 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Afer_2022 1ba87b8dfd00a09173321c76e6d5995d 267 SUPERFAMILY SSF48256 14 242 3.93E-39 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Afer_2022 1ba87b8dfd00a09173321c76e6d5995d 267 Pfam PF00285 Citrate synthase, C-terminal domain 34 239 1.7E-21 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Afer_2022 1ba87b8dfd00a09173321c76e6d5995d 267 Gene3D G3DSA:1.10.230.10 103 212 7.8E-23 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Afer_0407 2b5a08736b2486331a9763672a3fd235 90 SUPERFAMILY SSF50249 11 89 1.88E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0407 2b5a08736b2486331a9763672a3fd235 90 Gene3D G3DSA:2.40.50.140 11 90 4.4E-31 T 14-10-2018 Afer_0407 2b5a08736b2486331a9763672a3fd235 90 PRINTS PR00973 Ribosomal protein S17 family signature 73 80 4.2E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0407 2b5a08736b2486331a9763672a3fd235 90 PRINTS PR00973 Ribosomal protein S17 family signature 31 54 4.2E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0407 2b5a08736b2486331a9763672a3fd235 90 PRINTS PR00973 Ribosomal protein S17 family signature 63 73 4.2E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0407 2b5a08736b2486331a9763672a3fd235 90 ProSitePatterns PS00056 Ribosomal protein S17 signature. 63 75 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0407 2b5a08736b2486331a9763672a3fd235 90 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 12 87 22.077 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0407 2b5a08736b2486331a9763672a3fd235 90 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 12 83 2.2E-30 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0407 2b5a08736b2486331a9763672a3fd235 90 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 12 83 2.0E-18 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0407 2b5a08736b2486331a9763672a3fd235 90 Pfam PF00366 Ribosomal protein S17 17 83 2.0E-28 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 Pfam PF02910 Fumarate reductase flavoprotein C-term 459 585 4.4E-42 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 44 53 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 PIRSF PIRSF000171 1 579 3.7E-44 T 14-10-2018 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 SUPERFAMILY SSF46977 450 585 4.71E-49 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 Gene3D G3DSA:3.90.700.10 250 353 1.1E-156 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 SUPERFAMILY SSF51905 7 428 7.35E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 SUPERFAMILY SSF56425 240 358 9.72E-40 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 2.6E-5 T 14-10-2018 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.6E-5 T 14-10-2018 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 8 583 1.5E-269 T 14-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 Pfam PF00890 FAD binding domain 11 405 5.9E-110 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 Gene3D G3DSA:3.50.50.60 11 414 1.1E-156 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 11 585 1.2E-238 T 14-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 Gene3D G3DSA:1.20.58.100 433 546 2.7E-33 T 14-10-2018 Afer_0312 32a7dd7b1813d0b03f0f332ddacd10c3 585 Gene3D G3DSA:4.10.80.40 547 581 9.6E-12 T 14-10-2018 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 SMART SM00740 432 497 4.2E-13 T 14-10-2018 IPR005543 PASTA domain Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 SMART SM00740 366 431 7.3E-7 T 14-10-2018 IPR005543 PASTA domain Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 SMART SM00740 498 565 7.2E-15 T 14-10-2018 IPR005543 PASTA domain Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 SMART SM00740 566 629 1.1E-7 T 14-10-2018 IPR005543 PASTA domain Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 SUPERFAMILY SSF56112 12 281 6.34E-80 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Gene3D G3DSA:3.30.10.20 368 432 9.6E-14 T 14-10-2018 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Gene3D G3DSA:3.30.10.20 500 566 3.4E-20 T 14-10-2018 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 PIRSF PIRSF000615 114 288 1.8E-13 T 14-10-2018 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 133 145 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Gene3D G3DSA:3.30.10.20 433 498 2.8E-16 T 14-10-2018 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Gene3D G3DSA:3.30.200.20 5 93 7.8E-28 T 14-10-2018 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Gene3D G3DSA:3.30.10.20 567 627 5.1E-12 T 14-10-2018 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 SMART SM00220 14 275 1.1E-68 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Pfam PF03793 PASTA domain 570 626 6.6E-10 T 14-10-2018 IPR005543 PASTA domain Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Pfam PF03793 PASTA domain 370 430 3.3E-9 T 14-10-2018 IPR005543 PASTA domain Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Pfam PF03793 PASTA domain 436 496 4.7E-12 T 14-10-2018 IPR005543 PASTA domain Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Pfam PF03793 PASTA domain 503 565 6.5E-15 T 14-10-2018 IPR005543 PASTA domain Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Pfam PF00069 Protein kinase domain 14 262 1.7E-50 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Afer_0087 3a092fd6906562ad9b33c3bbc1b15440 645 Gene3D G3DSA:1.10.510.10 95 283 4.2E-55 T 14-10-2018 Afer_0274 188c6453db921b2b6c639f18422b2ddb 205 Pfam PF07883 Cupin domain 111 177 1.4E-12 T 14-10-2018 IPR013096 Cupin 2, conserved barrel Afer_0274 188c6453db921b2b6c639f18422b2ddb 205 Gene3D G3DSA:1.10.260.40 6 77 5.9E-17 T 14-10-2018 Afer_0274 188c6453db921b2b6c639f18422b2ddb 205 SUPERFAMILY SSF47413 6 68 2.2E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Afer_0274 188c6453db921b2b6c639f18422b2ddb 205 SUPERFAMILY SSF51182 71 183 3.05E-22 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Afer_0274 188c6453db921b2b6c639f18422b2ddb 205 SMART SM00530 11 66 1.5E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Afer_0274 188c6453db921b2b6c639f18422b2ddb 205 Pfam PF13560 Helix-turn-helix domain 8 66 2.3E-15 T 14-10-2018 Afer_0274 188c6453db921b2b6c639f18422b2ddb 205 Gene3D G3DSA:2.60.120.10 98 187 1.7E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 474 1.4E-200 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 Pfam PF00120 Glutamine synthetase, catalytic domain 106 472 4.4E-131 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 SUPERFAMILY SSF54368 7 104 2.49E-34 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 ProSitePatterns PS00180 Glutamine synthetase signature 1. 53 71 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 Gene3D G3DSA:3.30.590.10 108 463 2.7E-145 T 14-10-2018 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 SMART SM01230 105 384 4.7E-150 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 Gene3D G3DSA:3.10.20.70 5 107 3.6E-39 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 18 98 7.5E-31 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 262 277 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Afer_0243 ca0259ab43a7cd4e9197dea4c3a32de7 475 SUPERFAMILY SSF55931 105 474 6.96E-135 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Afer_0409 cdc69799c04cc4737d87433556a467ed 101 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 2 99 3.7E-29 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0409 cdc69799c04cc4737d87433556a467ed 101 SMART SM00739 2 29 0.0013 T 14-10-2018 IPR005824 KOW Afer_0409 cdc69799c04cc4737d87433556a467ed 101 Gene3D G3DSA:2.30.30.30 1 99 1.1E-30 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Afer_0409 cdc69799c04cc4737d87433556a467ed 101 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 98 2.7E-16 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0409 cdc69799c04cc4737d87433556a467ed 101 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0409 cdc69799c04cc4737d87433556a467ed 101 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 17.949 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0409 cdc69799c04cc4737d87433556a467ed 101 SUPERFAMILY SSF50104 2 98 4.73E-26 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Afer_0269 7bb0950c37fef486446a54b5c4f4be26 331 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 28 46 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Afer_0269 7bb0950c37fef486446a54b5c4f4be26 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 286 1.3E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Afer_0269 7bb0950c37fef486446a54b5c4f4be26 331 Gene3D G3DSA:3.40.50.1100 11 293 7.3E-97 T 14-10-2018 Afer_0269 7bb0950c37fef486446a54b5c4f4be26 331 Gene3D G3DSA:3.40.50.1100 40 139 7.3E-97 T 14-10-2018 Afer_0269 7bb0950c37fef486446a54b5c4f4be26 331 SUPERFAMILY SSF53686 7 298 3.01E-84 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 Pfam PF01037 Lrp/AsnC ligand binding domain 110 173 9.2E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 SUPERFAMILY SSF54909 101 181 2.28E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 55 66 6.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 55 6.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 66 85 6.3E-11 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 Pfam PF13404 AsnC-type helix-turn-helix domain 39 79 8.2E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 Gene3D G3DSA:3.30.70.920 90 170 6.0E-17 T 14-10-2018 Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 SUPERFAMILY SSF46785 38 98 5.63E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 Gene3D G3DSA:1.10.10.10 36 88 5.3E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0574 c6bea9385df37fd1de1dc139ab4e3578 184 SMART SM00344 39 143 4.4E-32 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 Afer_1248 8679f23f52176c5dfeda21a439609d84 344 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 19 329 8.6E-89 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1248 8679f23f52176c5dfeda21a439609d84 344 ProSitePatterns PS01348 MraY family signature 2. 170 181 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1248 8679f23f52176c5dfeda21a439609d84 344 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1248 8679f23f52176c5dfeda21a439609d84 344 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 334 21.511 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1248 8679f23f52176c5dfeda21a439609d84 344 Pfam PF00953 Glycosyl transferase family 4 83 260 1.9E-32 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Afer_1248 8679f23f52176c5dfeda21a439609d84 344 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 1.4E-5 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 SMART SM01192 143 429 2.3E-191 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 Hamap MF_00318 Enolase [eno]. 7 415 41.761 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 SMART SM01193 9 138 6.2E-67 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 9 425 2.9E-178 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 Pfam PF03952 Enolase, N-terminal domain 9 138 5.5E-45 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 SUPERFAMILY SSF54826 8 141 1.11E-41 T 14-10-2018 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 Gene3D G3DSA:3.30.390.10 8 130 1.2E-38 T 14-10-2018 IPR029017 Enolase-like, N-terminal Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 PRINTS PR00148 Enolase signature 42 56 1.2E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 PRINTS PR00148 Enolase signature 367 384 1.2E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 PRINTS PR00148 Enolase signature 111 127 1.2E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 PRINTS PR00148 Enolase signature 165 178 1.2E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 PRINTS PR00148 Enolase signature 315 326 1.2E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 PRINTS PR00148 Enolase signature 338 352 1.2E-43 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 SUPERFAMILY SSF51604 143 424 1.29E-114 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 PIRSF PIRSF001400 5 428 5.5E-167 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 Gene3D G3DSA:3.20.20.120 132 428 3.0E-121 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 ProSitePatterns PS00164 Enolase signature. 338 351 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1589 976f7d5b65b46c4871e12314eaa1103a 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 145 422 6.1E-112 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 191 249 2.7E-15 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 436 2.9E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SMART SM01231 189 249 2.3E-19 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SUPERFAMILY SSF47384 191 250 1.1E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Gene3D G3DSA:1.10.287.560 190 249 9.1E-20 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Pfam PF01584 CheW-like domain 442 574 2.4E-19 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Pfam PF01584 CheW-like domain 609 721 9.9E-8 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SMART SM00260 597 719 8.6E-4 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SMART SM00260 429 574 1.0E-29 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 353 2.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 434 2.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 2.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 2.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SUPERFAMILY SSF50341 436 573 2.75E-27 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Gene3D G3DSA:1.20.120.160 5 141 2.0E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SMART SM00073 5 102 8.0E-17 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SMART SM00387 294 437 7.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SUPERFAMILY SSF55874 252 435 1.57E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SUPERFAMILY SSF47226 6 128 4.84E-25 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Gene3D G3DSA:2.30.30.40 437 570 2.6E-36 T 14-10-2018 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Gene3D G3DSA:2.40.50.180 460 529 2.6E-36 T 14-10-2018 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Gene3D G3DSA:3.30.565.10 250 436 9.5E-58 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 SUPERFAMILY SSF50341 608 721 3.66E-12 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Gene3D G3DSA:2.40.50.180 627 700 1.1E-6 T 14-10-2018 Afer_0212 c0d59b51776314bb1e80599a84dc18cc 728 Pfam PF01627 Hpt domain 9 99 8.6E-14 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 Afer_1008 83f10105af9f02727708882a67a7433f 553 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 45 517 38.415 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 Gene3D G3DSA:3.40.50.10490 97 292 2.4E-199 T 14-10-2018 Afer_1008 83f10105af9f02727708882a67a7433f 553 Pfam PF00342 Phosphoglucose isomerase 53 536 3.7E-179 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 490 507 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 Gene3D G3DSA:1.10.1390.10 500 542 1.0E-14 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 2.8E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 PRINTS PR00662 Glucose-6-phosphate isomerase signature 476 490 2.8E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 PRINTS PR00662 Glucose-6-phosphate isomerase signature 458 476 2.8E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 PRINTS PR00662 Glucose-6-phosphate isomerase signature 490 503 2.8E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 PRINTS PR00662 Glucose-6-phosphate isomerase signature 149 168 2.8E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 2.8E-49 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1008 83f10105af9f02727708882a67a7433f 553 Gene3D G3DSA:3.40.50.10490 12 499 2.4E-199 T 14-10-2018 Afer_1008 83f10105af9f02727708882a67a7433f 553 SUPERFAMILY SSF53697 6 543 2.64E-179 T 14-10-2018 Afer_1399 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF05598 Transposase domain (DUF772) 53 122 3.2E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Afer_1399 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF01609 Transposase DDE domain 260 357 6.1E-10 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Afer_1399 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF13751 Transposase DDE domain 381 492 1.5E-23 T 14-10-2018 IPR025668 Transposase DDE domain Afer_1477 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF05598 Transposase domain (DUF772) 53 122 3.2E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Afer_1477 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF01609 Transposase DDE domain 260 357 6.1E-10 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Afer_1477 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF13751 Transposase DDE domain 381 492 1.5E-23 T 14-10-2018 IPR025668 Transposase DDE domain Afer_1323 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF05598 Transposase domain (DUF772) 53 122 3.2E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Afer_1323 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF01609 Transposase DDE domain 260 357 6.1E-10 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Afer_1323 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF13751 Transposase DDE domain 381 492 1.5E-23 T 14-10-2018 IPR025668 Transposase DDE domain Afer_1487 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF05598 Transposase domain (DUF772) 53 122 3.2E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Afer_1487 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF01609 Transposase DDE domain 260 357 6.1E-10 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Afer_1487 a4d4aca9a049e6bb1876df5f16f10a51 508 Pfam PF13751 Transposase DDE domain 381 492 1.5E-23 T 14-10-2018 IPR025668 Transposase DDE domain Afer_0678 2c2e96bfcf70c67eeec7b76ba7e5fe06 109 SUPERFAMILY SSF46689 18 102 9.68E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0678 2c2e96bfcf70c67eeec7b76ba7e5fe06 109 Pfam PF01527 Transposase 15 89 6.3E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0678 2c2e96bfcf70c67eeec7b76ba7e5fe06 109 Gene3D G3DSA:1.10.10.60 23 102 3.4E-13 T 14-10-2018 Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 SMART SM00849 13 181 2.0E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 Gene3D G3DSA:3.40.250.10 249 349 9.7E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 Gene3D G3DSA:3.60.15.10 7 245 5.0E-51 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 Gene3D G3DSA:3.40.250.10 351 445 2.9E-14 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 SUPERFAMILY SSF56281 5 218 1.25E-36 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 Pfam PF00753 Metallo-beta-lactamase superfamily 16 181 2.8E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 Pfam PF00581 Rhodanese-like domain 361 430 2.3E-4 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 SUPERFAMILY SSF52821 223 337 4.32E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 SUPERFAMILY SSF52821 353 442 4.71E-18 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1014 97d51fd5537d34c4bd4cd2660cf4afc4 454 SMART SM00450 358 451 0.0074 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_0527 d100f4b7ee7d9cd9ffb34c96e6e34989 279 SUPERFAMILY SSF53335 19 272 9.29E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0527 d100f4b7ee7d9cd9ffb34c96e6e34989 279 SMART SM00650 34 205 7.0E-42 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Afer_0527 d100f4b7ee7d9cd9ffb34c96e6e34989 279 Pfam PF00398 Ribosomal RNA adenine dimethylase 22 267 5.0E-34 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm Afer_0527 d100f4b7ee7d9cd9ffb34c96e6e34989 279 Gene3D G3DSA:3.40.50.150 1 209 1.9E-44 T 14-10-2018 Afer_0527 d100f4b7ee7d9cd9ffb34c96e6e34989 279 Gene3D G3DSA:1.10.8.100 210 279 1.3E-15 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 Afer_0527 d100f4b7ee7d9cd9ffb34c96e6e34989 279 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 50 77 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 Afer_0527 d100f4b7ee7d9cd9ffb34c96e6e34989 279 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 19 270 1.7E-51 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 SMART SM00363 6 65 6.4E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 Pfam PF00849 RNA pseudouridylate synthase 67 192 1.9E-14 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 Gene3D G3DSA:3.10.290.10 2 59 4.5E-15 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 SUPERFAMILY SSF55120 64 229 2.4E-38 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 Gene3D G3DSA:3.30.70.580 60 134 3.9E-28 T 14-10-2018 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 SUPERFAMILY SSF55174 8 59 1.49E-8 T 14-10-2018 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 224 5.0E-44 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 Gene3D G3DSA:3.30.70.1560 135 206 3.0E-20 T 14-10-2018 Afer_1356 f63852ac458d75e9f7787df581cd0111 254 Pfam PF01479 S4 domain 9 48 1.2E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1457 5c4404d9c6695536b8a8d155c993a553 248 SUPERFAMILY SSF53335 13 133 1.12E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1457 5c4404d9c6695536b8a8d155c993a553 248 Pfam PF13649 Methyltransferase domain 41 126 1.2E-7 T 14-10-2018 Afer_1457 5c4404d9c6695536b8a8d155c993a553 248 Gene3D G3DSA:3.40.50.150 7 246 5.5E-23 T 14-10-2018 Afer_0165 0436b721d8ba4749af5b6779f07df7f6 224 Gene3D G3DSA:3.20.20.70 1 217 2.7E-71 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0165 0436b721d8ba4749af5b6779f07df7f6 224 PIRSF PIRSF001461 1 223 9.2E-74 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Afer_0165 0436b721d8ba4749af5b6779f07df7f6 224 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 202 5.2E-67 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Afer_0165 0436b721d8ba4749af5b6779f07df7f6 224 SUPERFAMILY SSF51366 2 213 3.61E-57 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Afer_0165 0436b721d8ba4749af5b6779f07df7f6 224 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 6 205 3.8E-72 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Gene3D G3DSA:2.40.50.100 626 709 0.0 T 14-10-2018 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Pfam PF04563 RNA polymerase beta subunit 76 388 3.7E-20 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 ProSitePatterns PS01166 RNA polymerases beta chain signature. 873 885 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 11 1136 12.246 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Pfam PF04561 RNA polymerase Rpb2, domain 2 141 344 1.0E-11 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Gene3D G3DSA:2.40.50.150 745 871 0.0 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Gene3D G3DSA:3.90.1110.10 146 338 0.0 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Gene3D G3DSA:2.40.270.10 15 1036 0.0 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Pfam PF00562 RNA polymerase Rpb2, domain 6 626 1058 4.7E-156 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Pfam PF10385 RNA polymerase beta subunit external 1 domain 481 564 1.3E-27 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Gene3D G3DSA:3.90.1100.10 16 625 0.0 T 14-10-2018 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Gene3D G3DSA:3.90.1800.10 1045 1099 1.4E-10 T 14-10-2018 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Pfam PF04565 RNA polymerase Rpb2, domain 3 403 470 7.9E-28 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 SUPERFAMILY SSF64484 10 1143 0.0 T 14-10-2018 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Gene3D G3DSA:2.30.150.10 484 568 0.0 T 14-10-2018 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 Pfam PF04560 RNA polymerase Rpb2, domain 7 1060 1133 1.2E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0391 be9c866a5ed49daf2a79334104c1c61e 1181 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 225 847 3.9E-290 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0208 9b228749d6538131500cf63a61cd4be8 462 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 3.0E-6 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Afer_0208 9b228749d6538131500cf63a61cd4be8 462 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 3.0E-6 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Afer_0208 9b228749d6538131500cf63a61cd4be8 462 PRINTS PR01005 Flagellar hook-associated protein signature 448 462 3.0E-6 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Afer_0208 9b228749d6538131500cf63a61cd4be8 462 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 5 458 3.3E-72 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 Afer_0208 9b228749d6538131500cf63a61cd4be8 462 SUPERFAMILY SSF64518 111 459 1.26E-13 T 14-10-2018 Afer_0208 9b228749d6538131500cf63a61cd4be8 462 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 405 458 6.3E-8 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Afer_0208 9b228749d6538131500cf63a61cd4be8 462 Pfam PF00460 Flagella basal body rod protein 6 36 6.3E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Afer_1061 8d3d8a5898a5e96c500488f74b58ff7a 493 Gene3D G3DSA:1.20.1720.10 21 253 1.1E-46 T 14-10-2018 Afer_1061 8d3d8a5898a5e96c500488f74b58ff7a 493 SUPERFAMILY SSF103473 19 482 9.81E-67 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1061 8d3d8a5898a5e96c500488f74b58ff7a 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 9.2E-6 T 14-10-2018 Afer_1061 8d3d8a5898a5e96c500488f74b58ff7a 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 210 228 9.2E-6 T 14-10-2018 Afer_1061 8d3d8a5898a5e96c500488f74b58ff7a 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 9.2E-6 T 14-10-2018 Afer_1061 8d3d8a5898a5e96c500488f74b58ff7a 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 308 332 9.2E-6 T 14-10-2018 Afer_1061 8d3d8a5898a5e96c500488f74b58ff7a 493 Pfam PF07690 Major Facilitator Superfamily 26 415 1.8E-55 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1061 8d3d8a5898a5e96c500488f74b58ff7a 493 Gene3D G3DSA:1.20.1250.20 262 479 1.8E-22 T 14-10-2018 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 450 30.882 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 SUPERFAMILY SSF52949 52 134 1.18E-7 T 14-10-2018 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 51 101 2.5E-5 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 Gene3D G3DSA:3.40.630.10 119 448 2.5E-126 T 14-10-2018 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 136 441 1.8E-114 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 297 304 - T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 PRINTS PR00481 Cytosol aminopeptidase signature 271 292 1.8E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 PRINTS PR00481 Cytosol aminopeptidase signature 321 336 1.8E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 PRINTS PR00481 Cytosol aminopeptidase signature 212 229 1.8E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 PRINTS PR00481 Cytosol aminopeptidase signature 293 313 1.8E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 PRINTS PR00481 Cytosol aminopeptidase signature 234 255 1.8E-51 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 SUPERFAMILY SSF53187 131 446 7.74E-111 T 14-10-2018 Afer_0724 404a333c4077bb14b1f96cf18457cc04 455 Gene3D G3DSA:3.40.220.10 44 118 2.6E-6 T 14-10-2018 Afer_0733 98f85a1c5a29cde8b6c47d7c65903c21 355 Pfam PF00483 Nucleotidyl transferase 2 235 1.3E-50 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Afer_0733 98f85a1c5a29cde8b6c47d7c65903c21 355 Gene3D G3DSA:2.160.10.10 245 353 3.7E-8 T 14-10-2018 Afer_0733 98f85a1c5a29cde8b6c47d7c65903c21 355 Gene3D G3DSA:3.90.550.10 1 244 7.9E-70 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0733 98f85a1c5a29cde8b6c47d7c65903c21 355 SUPERFAMILY SSF53448 1 304 4.73E-73 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0733 98f85a1c5a29cde8b6c47d7c65903c21 355 TIGRFAM TIGR01208 rmlA_long: glucose-1-phosphate thymidylyltransferase 2 354 7.6E-126 T 14-10-2018 IPR005908 Glucose-1-phosphate thymidylyltransferase, long form Afer_0769 93eaf72af05456046c306e8d6f3e7c7d 644 Gene3D G3DSA:3.90.1310.30 35 223 1.3E-39 T 14-10-2018 Afer_0769 93eaf72af05456046c306e8d6f3e7c7d 644 Pfam PF03717 Penicillin-binding Protein dimerisation domain 42 210 2.7E-41 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 Afer_0769 93eaf72af05456046c306e8d6f3e7c7d 644 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 2 612 1.2E-148 T 14-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 Afer_0769 93eaf72af05456046c306e8d6f3e7c7d 644 SUPERFAMILY SSF56601 178 613 3.27E-79 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Afer_0769 93eaf72af05456046c306e8d6f3e7c7d 644 Gene3D G3DSA:3.40.710.10 224 616 1.0E-91 T 14-10-2018 Afer_0769 93eaf72af05456046c306e8d6f3e7c7d 644 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 609 7.7E-65 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Afer_0769 93eaf72af05456046c306e8d6f3e7c7d 644 SUPERFAMILY SSF56519 34 226 3.4E-46 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Afer_0256 1f23d0738311911b89f8881c6c8dacca 292 SUPERFAMILY SSF56300 3 254 1.52E-30 T 14-10-2018 Afer_0256 1f23d0738311911b89f8881c6c8dacca 292 Gene3D G3DSA:3.60.21.10 1 258 5.6E-24 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Afer_0256 1f23d0738311911b89f8881c6c8dacca 292 Pfam PF00149 Calcineurin-like phosphoesterase 3 208 3.1E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Afer_1633 eaa77538f1ebce2883da1584d32061a3 194 Gene3D G3DSA:1.20.5.810 15 65 1.6E-15 T 14-10-2018 Afer_1633 eaa77538f1ebce2883da1584d32061a3 194 Pfam PF02627 Carboxymuconolactone decarboxylase family 46 97 7.2E-13 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Afer_1633 eaa77538f1ebce2883da1584d32061a3 194 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 64 100 3.1E-11 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Afer_1633 eaa77538f1ebce2883da1584d32061a3 194 TIGRFAM TIGR01926 peroxid_rel: uncharacterized peroxidase-related enzyme 16 180 7.0E-47 T 14-10-2018 IPR010195 Uncharacterised peroxidase-related Afer_1633 eaa77538f1ebce2883da1584d32061a3 194 Gene3D G3DSA:1.20.1290.10 66 189 2.9E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Afer_1633 eaa77538f1ebce2883da1584d32061a3 194 SUPERFAMILY SSF69118 13 191 5.16E-45 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Afer_1081 2da2852319f78ab0acc3b92909a2558b 203 Pfam PF03861 ANTAR domain 141 192 9.7E-18 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Afer_1081 2da2852319f78ab0acc3b92909a2558b 203 Gene3D G3DSA:3.40.50.2300 1 131 4.7E-32 T 14-10-2018 Afer_1081 2da2852319f78ab0acc3b92909a2558b 203 SMART SM00448 3 114 3.6E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1081 2da2852319f78ab0acc3b92909a2558b 203 SMART SM01012 137 192 2.8E-19 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 Afer_1081 2da2852319f78ab0acc3b92909a2558b 203 SUPERFAMILY SSF52172 2 192 1.57E-49 T 14-10-2018 IPR011006 CheY-like superfamily Afer_1081 2da2852319f78ab0acc3b92909a2558b 203 PIRSF PIRSF036382 1 198 9.4E-55 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator Afer_1081 2da2852319f78ab0acc3b92909a2558b 203 Gene3D G3DSA:1.10.10.10 140 197 3.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1081 2da2852319f78ab0acc3b92909a2558b 203 Pfam PF00072 Response regulator receiver domain 5 114 1.6E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 Pfam PF13180 PDZ domain 389 468 4.4E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 SUPERFAMILY SSF50494 156 368 8.04E-53 T 14-10-2018 IPR009003 Peptidase S1, PA clan Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 SUPERFAMILY SSF50156 387 480 3.68E-18 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 Gene3D G3DSA:2.40.10.10 146 252 4.6E-26 T 14-10-2018 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 PRINTS PR00834 HtrA/DegQ protease family signature 304 321 1.9E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 PRINTS PR00834 HtrA/DegQ protease family signature 429 441 1.9E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 PRINTS PR00834 HtrA/DegQ protease family signature 198 210 1.9E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 PRINTS PR00834 HtrA/DegQ protease family signature 261 285 1.9E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 PRINTS PR00834 HtrA/DegQ protease family signature 220 240 1.9E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 PRINTS PR00834 HtrA/DegQ protease family signature 326 343 1.9E-35 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 Pfam PF13365 Trypsin-like peptidase domain 189 333 4.4E-32 T 14-10-2018 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 Gene3D G3DSA:2.30.42.10 386 485 4.6E-26 T 14-10-2018 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 SMART SM00228 388 471 3.9E-12 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Afer_0559 ba8c97ce3c2ab98e24f07e411e41634c 487 Gene3D G3DSA:2.40.10.10 253 370 6.7E-34 T 14-10-2018 Afer_0105 c1e86863792468bc7671410f7e4c8b60 464 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 67 191 4.8E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Afer_0105 c1e86863792468bc7671410f7e4c8b60 464 SUPERFAMILY SSF50129 49 231 9.43E-32 T 14-10-2018 IPR011032 GroES-like superfamily Afer_0105 c1e86863792468bc7671410f7e4c8b60 464 Gene3D G3DSA:3.90.180.10 13 432 5.3E-204 T 14-10-2018 Afer_0105 c1e86863792468bc7671410f7e4c8b60 464 Gene3D G3DSA:3.40.50.720 220 365 5.3E-204 T 14-10-2018 Afer_0105 c1e86863792468bc7671410f7e4c8b60 464 TIGRFAM TIGR01751 crot-CoA-red: crotonyl-CoA carboxylase/reductase 38 427 1.1E-167 T 14-10-2018 IPR010085 Crotonyl-CoA reductase GO:0043880 KEGG: 00650+1.3.1.86 Afer_0105 c1e86863792468bc7671410f7e4c8b60 464 SUPERFAMILY SSF51735 196 385 6.67E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0105 c1e86863792468bc7671410f7e4c8b60 464 Pfam PF00107 Zinc-binding dehydrogenase 237 380 1.1E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Afer_0105 c1e86863792468bc7671410f7e4c8b60 464 SMART SM00829 51 415 2.2E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 442 7.6E-8 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 Gene3D G3DSA:3.50.50.60 113 451 3.4E-140 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.1E-25 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.1E-25 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 1.1E-25 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 262 1.1E-25 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 295 1.1E-25 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 SUPERFAMILY SSF51905 155 327 3.89E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 317 6.6E-53 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 SUPERFAMILY SSF51905 1 199 1.44E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 288 295 1.2E-18 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 1.2E-18 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 397 412 1.2E-18 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.2E-18 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 247 261 1.2E-18 T 14-10-2018 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 SUPERFAMILY SSF55424 333 457 1.89E-21 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_1858 36afc4af4a9e0dcacc52a8ea422e9fe5 466 Gene3D G3DSA:3.50.50.60 4 350 3.4E-140 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0505 14e53e8f7fe3b9fb3b604e446ca00d53 265 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0505 14e53e8f7fe3b9fb3b604e446ca00d53 265 Pfam PF00005 ABC transporter 24 184 1.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0505 14e53e8f7fe3b9fb3b604e446ca00d53 265 SMART SM00382 32 233 2.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0505 14e53e8f7fe3b9fb3b604e446ca00d53 265 Gene3D G3DSA:3.40.50.300 6 259 7.8E-63 T 14-10-2018 Afer_0505 14e53e8f7fe3b9fb3b604e446ca00d53 265 SUPERFAMILY SSF52540 5 254 1.0E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0505 14e53e8f7fe3b9fb3b604e446ca00d53 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 235 254 1.9E-4 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal Afer_1947 52682aa3052c58043783e2eddda47422 470 Gene3D G3DSA:3.40.50.720 235 470 3.9E-77 T 14-10-2018 Afer_1947 52682aa3052c58043783e2eddda47422 470 SUPERFAMILY SSF55021 10 77 4.58E-8 T 14-10-2018 Afer_1947 52682aa3052c58043783e2eddda47422 470 SMART SM01274 92 225 1.8E-70 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Afer_1947 52682aa3052c58043783e2eddda47422 470 PIRSF PIRSF000106 64 470 1.6E-80 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Afer_1947 52682aa3052c58043783e2eddda47422 470 SUPERFAMILY SSF51735 237 469 1.15E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1947 52682aa3052c58043783e2eddda47422 470 SMART SM00919 237 459 2.0E-109 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Afer_1947 52682aa3052c58043783e2eddda47422 470 Pfam PF00390 Malic enzyme, N-terminal domain 94 189 8.6E-19 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Afer_1947 52682aa3052c58043783e2eddda47422 470 Pfam PF00390 Malic enzyme, N-terminal domain 190 222 4.0E-4 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 Afer_1947 52682aa3052c58043783e2eddda47422 470 Gene3D G3DSA:3.30.70.260 2 79 4.3E-5 T 14-10-2018 Afer_1947 52682aa3052c58043783e2eddda47422 470 SUPERFAMILY SSF53223 86 235 1.51E-50 T 14-10-2018 Afer_1947 52682aa3052c58043783e2eddda47422 470 Pfam PF03949 Malic enzyme, NAD binding domain 239 459 9.9E-25 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 Afer_1947 52682aa3052c58043783e2eddda47422 470 PRINTS PR00072 Malic enzyme signature 154 176 9.0E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Afer_1947 52682aa3052c58043783e2eddda47422 470 PRINTS PR00072 Malic enzyme signature 233 249 9.0E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Afer_1947 52682aa3052c58043783e2eddda47422 470 PRINTS PR00072 Malic enzyme signature 264 280 9.0E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 Afer_1947 52682aa3052c58043783e2eddda47422 470 Pfam PF01842 ACT domain 11 74 3.0E-7 T 14-10-2018 IPR002912 ACT domain Afer_1947 52682aa3052c58043783e2eddda47422 470 Gene3D G3DSA:3.40.50.10380 80 234 1.1E-63 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 Afer_0403 3cb81873edaed76789bc1638c98c1e0f 218 Gene3D G3DSA:3.90.470.10 10 149 9.0E-37 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0403 3cb81873edaed76789bc1638c98c1e0f 218 Pfam PF00237 Ribosomal protein L22p/L17e 14 115 5.6E-29 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 Afer_0403 3cb81873edaed76789bc1638c98c1e0f 218 ProSitePatterns PS00464 Ribosomal protein L22 signature. 91 115 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0403 3cb81873edaed76789bc1638c98c1e0f 218 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 9 118 24.524 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0403 3cb81873edaed76789bc1638c98c1e0f 218 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 13 115 6.3E-31 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0403 3cb81873edaed76789bc1638c98c1e0f 218 SUPERFAMILY SSF54843 8 118 4.71E-35 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0358 8728bb18882ea4a851b2b6dea40d9287 405 Pfam PF13439 Glycosyltransferase Family 4 22 192 2.7E-27 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Afer_0358 8728bb18882ea4a851b2b6dea40d9287 405 Gene3D G3DSA:3.40.50.2000 5 385 3.8E-100 T 14-10-2018 Afer_0358 8728bb18882ea4a851b2b6dea40d9287 405 Gene3D G3DSA:3.40.50.2000 189 374 3.8E-100 T 14-10-2018 Afer_0358 8728bb18882ea4a851b2b6dea40d9287 405 SUPERFAMILY SSF53756 21 390 7.68E-78 T 14-10-2018 Afer_0358 8728bb18882ea4a851b2b6dea40d9287 405 Pfam PF00534 Glycosyl transferases group 1 205 372 4.3E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_1614 26573be30fae6496a10c4b90195e5f70 250 Gene3D G3DSA:3.40.1410.10 89 240 6.9E-28 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Afer_1614 26573be30fae6496a10c4b90195e5f70 250 SMART SM00345 22 79 1.9E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1614 26573be30fae6496a10c4b90195e5f70 250 SMART SM00866 101 237 4.0E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Afer_1614 26573be30fae6496a10c4b90195e5f70 250 Pfam PF07702 UTRA domain 109 236 4.5E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Afer_1614 26573be30fae6496a10c4b90195e5f70 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 5.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1614 26573be30fae6496a10c4b90195e5f70 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 5.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1614 26573be30fae6496a10c4b90195e5f70 250 SUPERFAMILY SSF46785 11 83 3.12E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1614 26573be30fae6496a10c4b90195e5f70 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 79 5.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1614 26573be30fae6496a10c4b90195e5f70 250 SUPERFAMILY SSF64288 67 242 1.07E-31 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Afer_1614 26573be30fae6496a10c4b90195e5f70 250 Gene3D G3DSA:1.10.10.10 13 85 4.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 Gene3D G3DSA:3.90.190.20 307 453 1.3E-48 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 Pfam PF01225 Mur ligase family, catalytic domain 13 110 1.6E-19 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 SUPERFAMILY SSF51984 11 98 7.85E-27 T 14-10-2018 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 Pfam PF08245 Mur ligase middle domain 115 289 5.3E-21 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 SUPERFAMILY SSF53623 96 306 3.21E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 Gene3D G3DSA:3.40.1190.10 99 306 2.9E-58 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 SUPERFAMILY SSF53244 308 453 9.68E-44 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 Gene3D G3DSA:3.40.50.720 11 98 1.1E-28 T 14-10-2018 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 10 455 34.916 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 13 449 4.3E-135 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_1244 dffff6a63d3061f65bad45a9eb6d97f4 455 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 394 7.8E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Afer_1157 b3bc63ec5cb8da0f2d767ffeffdd49f6 324 SUPERFAMILY SSF51735 9 153 2.61E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1157 b3bc63ec5cb8da0f2d767ffeffdd49f6 324 Gene3D G3DSA:3.40.50.720 6 171 6.7E-28 T 14-10-2018 Afer_1157 b3bc63ec5cb8da0f2d767ffeffdd49f6 324 Gene3D G3DSA:1.10.3660.10 172 298 3.8E-19 T 14-10-2018 Afer_1157 b3bc63ec5cb8da0f2d767ffeffdd49f6 324 Pfam PF02153 Prephenate dehydrogenase 54 254 5.0E-31 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 Afer_1157 b3bc63ec5cb8da0f2d767ffeffdd49f6 324 SUPERFAMILY SSF48179 168 256 2.95E-17 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Afer_0961 a7de65f31fcdeafd8d43b2f606440cd6 233 SUPERFAMILY SSF46785 160 226 4.9E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0961 a7de65f31fcdeafd8d43b2f606440cd6 233 Gene3D G3DSA:1.10.10.10 161 229 8.4E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 SUPERFAMILY SSF81653 117 212 1.31E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 571 596 6.7E-27 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 418 436 6.7E-27 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 540 556 6.7E-27 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 702 723 6.7E-27 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 512 528 6.7E-27 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 Pfam PF00702 haloacid dehalogenase-like hydrolase 307 553 1.4E-25 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 Gene3D G3DSA:1.20.1110.10 515 780 6.6E-42 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 Gene3D G3DSA:1.20.1110.10 196 328 5.8E-19 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 Pfam PF00690 Cation transporter/ATPase, N-terminus 23 72 1.2E-8 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 85 492 1.2E-58 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 512 628 2.8E-25 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 TIGRFAM TIGR01647 ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 25 745 7.0E-193 T 14-10-2018 IPR006534 P-type ATPase, subfamily IIIA GO:0008553|GO:0016021|GO:0120029 KEGG: 00190+3.6.3.6 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 313 319 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 SUPERFAMILY SSF56784 309 611 2.8E-46 T 14-10-2018 IPR036412 HAD-like superfamily Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 Gene3D G3DSA:3.40.1110.10 329 446 6.4E-22 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 SMART SM00831 11 78 3.9E-5 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 Gene3D G3DSA:2.70.150.10 94 193 2.6E-20 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 162 176 6.7E-37 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 6.7E-37 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 540 559 6.7E-37 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 468 478 6.7E-37 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 446 457 6.7E-37 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 563 575 6.7E-37 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 SUPERFAMILY SSF81665 24 779 9.29E-60 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 Pfam PF00122 E1-E2 ATPase 115 291 5.8E-45 T 14-10-2018 Afer_0291 debd80a27ceb8179a1b67a0fcbca0755 812 Gene3D G3DSA:3.40.50.1000 447 508 2.2E-8 T 14-10-2018 IPR023214 HAD superfamily Afer_0939 819611e30223192cfa97d4e85876f5ff 440 Pfam PF00155 Aminotransferase class I and II 71 422 2.2E-41 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Afer_0939 819611e30223192cfa97d4e85876f5ff 440 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 275 288 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Afer_0939 819611e30223192cfa97d4e85876f5ff 440 Gene3D G3DSA:3.40.640.10 59 427 1.8E-77 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0939 819611e30223192cfa97d4e85876f5ff 440 SUPERFAMILY SSF53383 70 425 3.56E-80 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1411 19b13e0d1293a52772a694efe7d9dfca 282 SUPERFAMILY SSF53697 99 256 2.0E-7 T 14-10-2018 Afer_1411 19b13e0d1293a52772a694efe7d9dfca 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 19 77 4.4E-12 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 Afer_1411 19b13e0d1293a52772a694efe7d9dfca 282 SUPERFAMILY SSF46689 18 83 7.35E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1411 19b13e0d1293a52772a694efe7d9dfca 282 Gene3D G3DSA:3.40.50.10490 94 273 6.8E-11 T 14-10-2018 Afer_1411 19b13e0d1293a52772a694efe7d9dfca 282 Gene3D G3DSA:1.10.10.10 4 85 5.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0745 76def282be6358d9d5deae1fe7ad0788 308 Gene3D G3DSA:3.90.25.10 166 288 7.6E-74 T 14-10-2018 Afer_0745 76def282be6358d9d5deae1fe7ad0788 308 Gene3D G3DSA:3.40.50.720 3 281 7.6E-74 T 14-10-2018 Afer_0745 76def282be6358d9d5deae1fe7ad0788 308 SUPERFAMILY SSF51735 1 295 6.72E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0745 76def282be6358d9d5deae1fe7ad0788 308 Pfam PF16363 GDP-mannose 4,6 dehydratase 34 290 5.8E-45 T 14-10-2018 IPR016040 NAD(P)-binding domain Afer_0309 4dd7c5e4b7f84644b42a1451ce46b17a 126 SUPERFAMILY SSF46785 19 103 3.42E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0309 4dd7c5e4b7f84644b42a1451ce46b17a 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.7E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_0309 4dd7c5e4b7f84644b42a1451ce46b17a 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 1.7E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_0309 4dd7c5e4b7f84644b42a1451ce46b17a 126 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.7E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_0309 4dd7c5e4b7f84644b42a1451ce46b17a 126 SMART SM00418 22 100 1.7E-22 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_0309 4dd7c5e4b7f84644b42a1451ce46b17a 126 Gene3D G3DSA:1.10.10.10 13 111 2.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0309 4dd7c5e4b7f84644b42a1451ce46b17a 126 Pfam PF01022 Bacterial regulatory protein, arsR family 29 74 3.7E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 PIRSF PIRSF000183 3 351 1.8E-121 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 Gene3D G3DSA:3.40.50.720 130 301 2.7E-118 T 14-10-2018 Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 137 2.0E-43 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 SUPERFAMILY SSF51735 137 299 5.26E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 342 1.9E-64 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 SMART SM01002 146 293 8.5E-66 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 SUPERFAMILY SSF52283 4 350 5.61E-54 T 14-10-2018 Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 SMART SM01003 6 137 5.8E-66 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 4 350 2.7E-120 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 Afer_0698 1ea2380d547a2083e8a852fbdc063545 351 Gene3D G3DSA:3.40.50.720 5 342 2.7E-118 T 14-10-2018 Afer_0899 103b4c6edd6708271ba3b8ad7341012a 340 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 66 242 3.3E-38 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG Afer_0899 103b4c6edd6708271ba3b8ad7341012a 340 Gene3D G3DSA:3.40.50.450 42 264 1.3E-55 T 14-10-2018 Afer_0899 103b4c6edd6708271ba3b8ad7341012a 340 SUPERFAMILY SSF102405 60 241 9.77E-48 T 14-10-2018 Afer_0899 103b4c6edd6708271ba3b8ad7341012a 340 Pfam PF03641 Possible lysine decarboxylase 108 241 3.1E-26 T 14-10-2018 IPR031100 LOG family Afer_1089 ec2d43cf6ca8ebc37188cab5efd11c6a 401 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 148 164 - T 14-10-2018 IPR018201 Beta-ketoacyl synthase, active site Afer_1089 ec2d43cf6ca8ebc37188cab5efd11c6a 401 Gene3D G3DSA:3.40.47.10 250 394 2.6E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1089 ec2d43cf6ca8ebc37188cab5efd11c6a 401 Gene3D G3DSA:3.40.47.10 2 243 1.4E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1089 ec2d43cf6ca8ebc37188cab5efd11c6a 401 SMART SM00825 Beta-ketoacyl synthase 16 400 3.9E-16 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain Afer_1089 ec2d43cf6ca8ebc37188cab5efd11c6a 401 SUPERFAMILY SSF53901 202 397 8.96E-67 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1089 ec2d43cf6ca8ebc37188cab5efd11c6a 401 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 243 353 2.4E-32 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal Afer_1089 ec2d43cf6ca8ebc37188cab5efd11c6a 401 SUPERFAMILY SSF53901 14 240 6.29E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1089 ec2d43cf6ca8ebc37188cab5efd11c6a 401 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 58 235 5.9E-41 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal Afer_1468 a99808ba71988f63120d75910e8a5b8d 354 SUPERFAMILY SSF47648 15 82 1.3E-15 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Afer_1468 a99808ba71988f63120d75910e8a5b8d 354 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 18 352 36.059 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Afer_1468 a99808ba71988f63120d75910e8a5b8d 354 Gene3D G3DSA:1.20.970.10 18 82 8.9E-19 T 14-10-2018 Afer_1468 a99808ba71988f63120d75910e8a5b8d 354 Gene3D G3DSA:3.40.1030.10 85 352 4.4E-95 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Afer_1468 a99808ba71988f63120d75910e8a5b8d 354 Pfam PF00591 Glycosyl transferase family, a/b domain 87 342 2.8E-82 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 Afer_1468 a99808ba71988f63120d75910e8a5b8d 354 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 22 349 5.8E-109 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 Afer_1468 a99808ba71988f63120d75910e8a5b8d 354 SUPERFAMILY SSF52418 85 349 9.16E-82 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 Afer_1468 a99808ba71988f63120d75910e8a5b8d 354 Pfam PF02885 Glycosyl transferase family, helical bundle domain 18 78 2.2E-15 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 Afer_0818 9782055879df29348c24f2f0c0ef7f87 215 Pfam PF03167 Uracil DNA glycosylase superfamily 39 204 6.1E-31 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Afer_0818 9782055879df29348c24f2f0c0ef7f87 215 SUPERFAMILY SSF52141 15 204 1.41E-40 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Afer_0818 9782055879df29348c24f2f0c0ef7f87 215 Gene3D G3DSA:3.40.470.10 4 211 3.4E-56 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Afer_0818 9782055879df29348c24f2f0c0ef7f87 215 SMART SM00987 39 203 1.2E-23 T 14-10-2018 Afer_0818 9782055879df29348c24f2f0c0ef7f87 215 SMART SM00986 39 203 1.2E-23 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Afer_1665 4976179627f439d81e832ca45962bf03 337 SUPERFAMILY SSF55347 148 305 1.59E-42 T 14-10-2018 Afer_1665 4976179627f439d81e832ca45962bf03 337 Gene3D G3DSA:3.30.360.10 146 305 5.6E-101 T 14-10-2018 Afer_1665 4976179627f439d81e832ca45962bf03 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 139 7.5E-23 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Afer_1665 4976179627f439d81e832ca45962bf03 337 SUPERFAMILY SSF51735 2 175 8.42E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1665 4976179627f439d81e832ca45962bf03 337 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 331 35.856 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Afer_1665 4976179627f439d81e832ca45962bf03 337 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 337 3.2E-98 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Afer_1665 4976179627f439d81e832ca45962bf03 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 306 3.8E-10 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Afer_1665 4976179627f439d81e832ca45962bf03 337 Gene3D G3DSA:3.40.50.720 3 323 5.6E-101 T 14-10-2018 Afer_1665 4976179627f439d81e832ca45962bf03 337 SMART SM00859 2 140 8.9E-34 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Afer_1187 c5daa29139fc0e8f5cb8c8d437cb77d4 167 SUPERFAMILY SSF53254 2 143 9.64E-16 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Afer_1187 c5daa29139fc0e8f5cb8c8d437cb77d4 167 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 76 2.1E-10 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Afer_1187 c5daa29139fc0e8f5cb8c8d437cb77d4 167 Gene3D G3DSA:3.40.50.1240 1 161 1.5E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Afer_1187 c5daa29139fc0e8f5cb8c8d437cb77d4 167 SMART SM00855 1 111 7.1E-4 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 Gene3D G3DSA:3.50.50.60 122 260 6.7E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 303 1.3E-19 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 218 234 5.3E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 291 309 5.3E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 10 32 5.3E-6 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 SUPERFAMILY SSF51905 120 260 1.38E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 Gene3D G3DSA:3.50.50.60 10 323 6.7E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 281 303 8.4E-5 T 14-10-2018 Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 8.4E-5 T 14-10-2018 Afer_0078 c42c1441e752231fcf4c9606461d13b6 401 SUPERFAMILY SSF51905 8 148 7.41E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 SUPERFAMILY SSF56176 335 415 1.36E-21 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 SMART SM00116 273 321 9.9E-4 T 14-10-2018 IPR000644 CBS domain Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 SMART SM00116 210 259 0.0011 T 14-10-2018 IPR000644 CBS domain Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 SMART SM01091 336 414 3.9E-23 T 14-10-2018 IPR005170 Transporter-associated domain Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 Gene3D G3DSA:3.10.580.10 180 327 9.4E-53 T 14-10-2018 Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 SUPERFAMILY SSF54631 196 336 2.65E-36 T 14-10-2018 Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 Gene3D G3DSA:3.30.465.10 328 413 4.0E-21 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 Pfam PF01595 Domain of unknown function DUF21 11 186 3.3E-32 T 14-10-2018 IPR002550 CNNM, transmembrane domain Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 Pfam PF03471 Transporter associated domain 337 413 1.2E-21 T 14-10-2018 IPR005170 Transporter-associated domain Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 Pfam PF00571 CBS domain 271 321 8.7E-10 T 14-10-2018 IPR000644 CBS domain Afer_1269 8f46570ca3c48d65e4140178fc93806f 420 Pfam PF00571 CBS domain 203 256 5.1E-5 T 14-10-2018 IPR000644 CBS domain Afer_0217 63f148b0b25e6250b35cd60059057046 122 SMART SM00448 1 115 9.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0217 63f148b0b25e6250b35cd60059057046 122 Gene3D G3DSA:3.40.50.12740 1 120 5.9E-31 T 14-10-2018 Afer_0217 63f148b0b25e6250b35cd60059057046 122 SUPERFAMILY SSF52172 2 118 1.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0217 63f148b0b25e6250b35cd60059057046 122 Pfam PF00072 Response regulator receiver domain 3 115 9.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0660 b8330e238f745374045ab18209744950 271 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 156 7.5E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Afer_0660 b8330e238f745374045ab18209744950 271 Gene3D G3DSA:2.160.10.10 84 249 1.9E-48 T 14-10-2018 Afer_0660 b8330e238f745374045ab18209744950 271 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 124 152 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 Afer_0660 b8330e238f745374045ab18209744950 271 Gene3D G3DSA:1.10.166.10 15 64 1.3E-8 T 14-10-2018 IPR037133 Tetrahydrodipicolinate-N-succinyltransferase, N-terminal domain superfamily KEGG: 00300+2.3.1.117 Afer_0660 b8330e238f745374045ab18209744950 271 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 21 64 2.1E-11 T 14-10-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 Afer_0660 b8330e238f745374045ab18209744950 271 SUPERFAMILY SSF51161 28 229 5.96E-51 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Afer_0660 b8330e238f745374045ab18209744950 271 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 200 1.5E-7 T 14-10-2018 IPR001451 Hexapeptide repeat Afer_0640 303721af203f96ab9526811e789029c4 298 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 290 16.395 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_0640 303721af203f96ab9526811e789029c4 298 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 237 289 2.2E-8 T 14-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_0640 303721af203f96ab9526811e789029c4 298 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 180 2.4E-44 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 Afer_0640 303721af203f96ab9526811e789029c4 298 Gene3D G3DSA:3.30.2350.10 1 231 7.1E-81 T 14-10-2018 Afer_0640 303721af203f96ab9526811e789029c4 298 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 182 223 3.3E-10 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 Afer_0640 303721af203f96ab9526811e789029c4 298 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 220 4.1E-65 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_0640 303721af203f96ab9526811e789029c4 298 SUPERFAMILY SSF55120 2 229 1.33E-66 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 TIGRFAM TIGR00767 rho: transcription termination factor Rho 9 588 1.0E-177 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 327 531 5.8E-19 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 Hamap MF_01884 Transcription termination factor Rho [rho]. 218 591 181.743 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 SUPERFAMILY SSF52540 301 539 1.84E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 Gene3D G3DSA:3.40.50.300 300 589 7.7E-123 T 14-10-2018 Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 Gene3D G3DSA:2.40.50.140 177 298 5.1E-26 T 14-10-2018 Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 SMART SM00357 223 287 4.9E-6 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 SUPERFAMILY SSF50249 222 292 1.14E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 SMART SM00382 338 523 4.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1811 6ccc71fab64a7b02dcc75e1b16d277bc 594 Pfam PF07497 Rho termination factor, RNA-binding domain 224 294 4.9E-23 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 Afer_0388 b3c7ab71d48319fb2f4cf8adac2b1d31 241 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 138 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0388 b3c7ab71d48319fb2f4cf8adac2b1d31 241 Gene3D G3DSA:3.40.50.790 67 158 1.3E-80 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich Afer_0388 b3c7ab71d48319fb2f4cf8adac2b1d31 241 SUPERFAMILY SSF56808 5 226 1.57E-81 T 14-10-2018 IPR023674 Ribosomal protein L1-like Afer_0388 b3c7ab71d48319fb2f4cf8adac2b1d31 241 Pfam PF00687 Ribosomal protein L1p/L10e family 32 219 1.9E-53 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein Afer_0388 b3c7ab71d48319fb2f4cf8adac2b1d31 241 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 226 1.9E-100 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Afer_0388 b3c7ab71d48319fb2f4cf8adac2b1d31 241 Gene3D G3DSA:3.30.190.20 24 221 1.3E-80 T 14-10-2018 Afer_0388 b3c7ab71d48319fb2f4cf8adac2b1d31 241 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 228 43.68 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 Afer_0388 b3c7ab71d48319fb2f4cf8adac2b1d31 241 PIRSF PIRSF002155 1 226 2.3E-73 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 44 55 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 Pfam PF14697 4Fe-4S dicluster domain 10 59 7.9E-9 T 14-10-2018 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 Gene3D G3DSA:3.30.70.20 5 63 1.8E-12 T 14-10-2018 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 Gene3D G3DSA:3.50.50.60 198 273 4.5E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 202 447 4.8E-20 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 95 190 3.6E-32 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 Gene3D G3DSA:3.50.50.60 312 438 1.1E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 Gene3D G3DSA:3.40.50.360 551 686 1.3E-10 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 SUPERFAMILY SSF51971 202 439 2.3E-40 T 14-10-2018 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 SUPERFAMILY SSF54862 6 65 8.17E-17 T 14-10-2018 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 PRINTS PR00419 Adrenodoxin reductase family signature 335 349 1.9E-16 T 14-10-2018 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 PRINTS PR00419 Adrenodoxin reductase family signature 225 238 1.9E-16 T 14-10-2018 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 PRINTS PR00419 Adrenodoxin reductase family signature 202 224 1.9E-16 T 14-10-2018 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 SUPERFAMILY SSF46548 70 211 2.93E-26 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 Gene3D G3DSA:1.10.1060.10 85 197 1.4E-31 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_1450 72b87ee8bba226fc54fe715ee197d778 762 SUPERFAMILY SSF52218 551 678 1.51E-8 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Afer_1682 de35a54765220f295ac404248de82583 162 SUPERFAMILY SSF52121 12 152 4.06E-43 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1682 de35a54765220f295ac404248de82583 162 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 14 149 9.2E-43 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1682 de35a54765220f295ac404248de82583 162 Gene3D G3DSA:3.40.50.960 2 154 6.4E-46 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1682 de35a54765220f295ac404248de82583 162 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 152 25.241 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1682 de35a54765220f295ac404248de82583 162 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 148 3.9E-35 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 Gene3D G3DSA:3.30.70.1660 127 356 3.3E-90 T 14-10-2018 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 SUPERFAMILY SSF75620 31 364 1.02E-120 T 14-10-2018 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 Gene3D G3DSA:1.20.58.410 3 113 7.7E-20 T 14-10-2018 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 Gene3D G3DSA:3.30.160.20 223 318 3.3E-90 T 14-10-2018 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 242 258 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 Pfam PF00472 RF-1 domain 228 335 3.3E-38 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 SMART SM00937 84 192 2.6E-37 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 Pfam PF03462 PCRF domain 31 216 4.0E-54 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 37.009 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Afer_1762 b2091a596e0f440a61478b35bca5fff8 369 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 362 9.3E-139 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 Afer_0943 5339a601030d56eb7653cb37d81c9076 349 Gene3D G3DSA:3.40.1780.10 30 343 1.5E-87 T 14-10-2018 Afer_0943 5339a601030d56eb7653cb37d81c9076 349 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 16 344 36.505 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Afer_0943 5339a601030d56eb7653cb37d81c9076 349 Gene3D G3DSA:2.40.10.240 78 174 1.5E-87 T 14-10-2018 Afer_0943 5339a601030d56eb7653cb37d81c9076 349 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 17 343 4.5E-86 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Afer_0943 5339a601030d56eb7653cb37d81c9076 349 Pfam PF02547 Queuosine biosynthesis protein 19 343 1.6E-101 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Afer_0943 5339a601030d56eb7653cb37d81c9076 349 SUPERFAMILY SSF111337 17 343 1.7E-100 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 Afer_1220 e3fa9d25ebd0a11e625377dab49116be 212 Pfam PF01174 SNO glutamine amidotransferase family 4 190 2.9E-47 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1220 e3fa9d25ebd0a11e625377dab49116be 212 PIRSF PIRSF005639 1 199 2.7E-59 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1220 e3fa9d25ebd0a11e625377dab49116be 212 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 2 196 32.824 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1220 e3fa9d25ebd0a11e625377dab49116be 212 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 2 191 7.2E-57 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1220 e3fa9d25ebd0a11e625377dab49116be 212 SUPERFAMILY SSF52317 2 192 2.52E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1220 e3fa9d25ebd0a11e625377dab49116be 212 Gene3D G3DSA:3.40.50.880 1 207 3.4E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1220 e3fa9d25ebd0a11e625377dab49116be 212 ProSitePatterns PS01236 PdxT/SNO family family signature. 39 49 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 69 293 4.6E-28 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 SUPERFAMILY SSF88659 146 217 9.16E-12 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 Gene3D G3DSA:1.10.601.10 2 142 2.6E-42 T 14-10-2018 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 Pfam PF04539 Sigma-70 region 3 152 220 1.4E-14 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 Gene3D G3DSA:1.10.10.10 226 301 5.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 Gene3D G3DSA:1.10.10.10 146 223 4.0E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 Pfam PF04545 Sigma-70, region 4 241 292 3.6E-10 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 Pfam PF04542 Sigma-70 region 2 73 137 2.6E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 PRINTS PR00046 Major sigma-70 factor signature 121 129 2.9E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 PRINTS PR00046 Major sigma-70 factor signature 280 291 2.9E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 PRINTS PR00046 Major sigma-70 factor signature 97 110 2.9E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 PRINTS PR00046 Major sigma-70 factor signature 265 280 2.9E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 PRINTS PR00046 Major sigma-70 factor signature 244 256 2.9E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 Pfam PF00140 Sigma-70 factor, region 1.2 35 67 4.9E-10 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 97 110 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 SUPERFAMILY SSF88659 205 293 3.4E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 PIRSF PIRSF000770 28 296 1.2E-36 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1208 6f0ef7c9b32bde6aac3f957568c25256 302 SUPERFAMILY SSF88946 35 140 6.8E-40 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0843 3fdb3793f3ee921fb7af1e11cb67322c 384 Gene3D G3DSA:3.60.120.10 113 379 2.1E-62 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Afer_0843 3fdb3793f3ee921fb7af1e11cb67322c 384 Pfam PF00425 chorismate binding enzyme 133 369 4.9E-47 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Afer_0843 3fdb3793f3ee921fb7af1e11cb67322c 384 SUPERFAMILY SSF56322 119 378 1.07E-58 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 Pfam PF03719 Ribosomal protein S5, C-terminal domain 82 152 2.1E-27 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 Gene3D G3DSA:3.30.160.20 1 68 2.9E-27 T 14-10-2018 Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 Gene3D G3DSA:3.30.230.10 69 161 3.8E-33 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 ProSitePatterns PS00585 Ribosomal protein S5 signature. 23 55 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 SUPERFAMILY SSF54768 3 71 1.46E-20 T 14-10-2018 Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 Pfam PF00333 Ribosomal protein S5, N-terminal domain 6 70 2.7E-25 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 4 157 8.0E-64 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 158 32.512 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 Afer_0415 69ee782ab02562d22addfa657cb06fa6 183 SUPERFAMILY SSF54211 74 153 5.31E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_0065 0de6f66244b90fb1dff96efe9b56044a 378 SUPERFAMILY SSF51445 47 345 1.63E-43 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_0065 0de6f66244b90fb1dff96efe9b56044a 378 Gene3D G3DSA:3.20.20.80 42 349 5.1E-53 T 14-10-2018 Afer_0065 0de6f66244b90fb1dff96efe9b56044a 378 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 190 199 - T 14-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 Afer_0065 0de6f66244b90fb1dff96efe9b56044a 378 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 90 339 1.2E-25 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 Afer_0807 ed8301217c12716d334ca787eab280fb 353 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 4 346 26.59 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Afer_0807 ed8301217c12716d334ca787eab280fb 353 Gene3D G3DSA:3.30.2110.10 6 169 4.2E-51 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Afer_0807 ed8301217c12716d334ca787eab280fb 353 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 11 340 2.3E-60 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Afer_0807 ed8301217c12716d334ca787eab280fb 353 SUPERFAMILY SSF111342 3 272 3.92E-79 T 14-10-2018 IPR036074 CbiD superfamily GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Afer_0807 ed8301217c12716d334ca787eab280fb 353 PIRSF PIRSF026782 2 350 1.5E-103 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Afer_0807 ed8301217c12716d334ca787eab280fb 353 Pfam PF01888 CbiD 4 255 3.2E-85 T 14-10-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00860+2.1.1.195|MetaCyc: PWY-7377 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 114 143 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 650 5.1E-222 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 322 337 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Pfam PF12826 Helix-hairpin-helix motif 500 555 2.3E-10 T 14-10-2018 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 584 656 2.5E-13 T 14-10-2018 IPR001357 BRCT domain Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SUPERFAMILY SSF52113 582 658 7.27E-17 T 14-10-2018 IPR036420 BRCT domain superfamily Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 398 423 7.7E-9 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SMART SM00292 582 659 2.6E-14 T 14-10-2018 IPR001357 BRCT domain Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 313 389 3.1E-32 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Gene3D G3DSA:1.10.150.20 495 575 3.7E-16 T 14-10-2018 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SMART SM00278 470 489 2100.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SMART SM00278 534 553 0.22 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SMART SM00278 436 455 0.47 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SUPERFAMILY SSF50249 309 392 1.11E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Gene3D G3DSA:3.40.50.10190 580 662 6.3E-21 T 14-10-2018 IPR036420 BRCT domain superfamily Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Gene3D G3DSA:2.20.70.80 382 419 2.6E-12 T 14-10-2018 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SUPERFAMILY SSF56091 3 307 4.52E-101 T 14-10-2018 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SMART SM00532 4 438 4.1E-235 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Gene3D G3DSA:2.40.50.140 309 380 1.5E-29 T 14-10-2018 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Hamap MF_01588 DNA ligase [ligA]. 3 656 47.255 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Gene3D G3DSA:3.30.470.90 72 308 3.3E-86 T 14-10-2018 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Gene3D G3DSA:1.10.150.20 422 494 1.7E-23 T 14-10-2018 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Gene3D G3DSA:1.10.287.610 1 71 3.4E-23 T 14-10-2018 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 309 4.4E-107 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 SUPERFAMILY SSF47781 394 572 4.77E-49 T 14-10-2018 IPR010994 RuvA domain 2-like Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 PIRSF PIRSF001604 1 660 4.0E-215 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 Afer_1554 2bab3bc22403f66e34f8d46bc3a5886f 664 Pfam PF14520 Helix-hairpin-helix domain 436 487 7.0E-6 T 14-10-2018 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 Pfam PF00171 Aldehyde dehydrogenase family 311 383 5.1E-7 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 Pfam PF00171 Aldehyde dehydrogenase family 7 295 1.1E-21 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 PIRSF PIRSF000151 11 425 9.9E-161 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 331 352 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 17 424 38.753 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 Gene3D G3DSA:3.40.605.10 30 419 7.4E-150 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 Gene3D G3DSA:3.40.309.10 236 382 7.4E-150 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 25 414 1.9E-132 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Afer_0782 03545f0c51b442e8b18fe0adbe9eea9b 425 SUPERFAMILY SSF53720 16 424 2.49E-113 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 Pfam PF01619 Proline dehydrogenase 129 421 3.2E-74 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 Gene3D G3DSA:3.20.20.220 50 454 1.6E-106 T 14-10-2018 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 Gene3D G3DSA:3.40.605.10 466 961 9.8E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 763 774 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 PIRSF PIRSF000197 79 971 5.7E-222 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 735 742 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 SUPERFAMILY SSF53720 496 963 2.49E-140 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 SUPERFAMILY SSF51730 119 443 1.41E-76 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 Gene3D G3DSA:3.40.309.10 740 930 9.8E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Afer_1378 3a1bd6e246b651d0d7f922ccb9bf4147 975 Pfam PF00171 Aldehyde dehydrogenase family 504 960 3.5E-141 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Afer_0234 1c7eb5131215b09147b6324d44cfe5aa 368 Hamap MF_02040 Iron-sulfur cluster carrier protein. 103 345 29.366 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Afer_0234 1c7eb5131215b09147b6324d44cfe5aa 368 Pfam PF01883 Iron-sulfur cluster assembly protein 8 67 4.7E-8 T 14-10-2018 IPR002744 MIP18 family-like Afer_0234 1c7eb5131215b09147b6324d44cfe5aa 368 Gene3D G3DSA:3.40.50.300 111 344 6.4E-53 T 14-10-2018 Afer_0234 1c7eb5131215b09147b6324d44cfe5aa 368 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 113 327 5.9E-67 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Afer_0234 1c7eb5131215b09147b6324d44cfe5aa 368 Gene3D G3DSA:3.30.300.130 3 98 3.9E-9 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Afer_0234 1c7eb5131215b09147b6324d44cfe5aa 368 SUPERFAMILY SSF52540 114 326 2.85E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0234 1c7eb5131215b09147b6324d44cfe5aa 368 SUPERFAMILY SSF117916 6 81 2.42E-10 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Afer_1185 b13468fed2284b112ea5457d09048529 167 Pfam PF04545 Sigma-70, region 4 109 157 5.0E-9 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Afer_1185 b13468fed2284b112ea5457d09048529 167 Gene3D G3DSA:1.10.10.10 95 165 1.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1185 b13468fed2284b112ea5457d09048529 167 Pfam PF04542 Sigma-70 region 2 16 78 2.2E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1185 b13468fed2284b112ea5457d09048529 167 SUPERFAMILY SSF88659 98 161 3.55E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_1185 b13468fed2284b112ea5457d09048529 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 16 160 1.7E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_1185 b13468fed2284b112ea5457d09048529 167 SUPERFAMILY SSF88946 14 91 1.02E-10 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1185 b13468fed2284b112ea5457d09048529 167 Gene3D G3DSA:1.10.1740.10 9 75 7.7E-8 T 14-10-2018 Afer_0585 94a73982c95d62977a01d5777127beef 180 Gene3D G3DSA:1.10.10.10 39 162 7.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0585 94a73982c95d62977a01d5777127beef 180 Pfam PF01047 MarR family 53 110 5.7E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0585 94a73982c95d62977a01d5777127beef 180 SMART SM00347 48 146 3.2E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0585 94a73982c95d62977a01d5777127beef 180 SUPERFAMILY SSF46785 50 160 4.32E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1221 f6a18b15ef074ac7b6d6ca3e8e2614f6 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 6 295 49.825 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1221 f6a18b15ef074ac7b6d6ca3e8e2614f6 295 PIRSF PIRSF029271 1 295 1.9E-144 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1221 f6a18b15ef074ac7b6d6ca3e8e2614f6 295 Gene3D G3DSA:3.20.20.70 2 295 6.1E-144 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1221 f6a18b15ef074ac7b6d6ca3e8e2614f6 295 Pfam PF01680 SOR/SNZ family 9 215 1.1E-105 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1221 f6a18b15ef074ac7b6d6ca3e8e2614f6 295 SUPERFAMILY SSF51366 20 267 5.18E-59 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Afer_1221 f6a18b15ef074ac7b6d6ca3e8e2614f6 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 11 295 2.1E-139 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 Afer_1367 33c6f1a69f786cf9a0e10e224fecd95f 502 Gene3D G3DSA:3.40.50.12780 3 392 9.3E-115 T 14-10-2018 Afer_1367 33c6f1a69f786cf9a0e10e224fecd95f 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 408 482 4.2E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_1367 33c6f1a69f786cf9a0e10e224fecd95f 502 SUPERFAMILY SSF56801 3 494 2.09E-153 T 14-10-2018 Afer_1367 33c6f1a69f786cf9a0e10e224fecd95f 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 14-10-2018 IPR020845 AMP-binding, conserved site Afer_1367 33c6f1a69f786cf9a0e10e224fecd95f 502 Pfam PF00501 AMP-binding enzyme 17 399 1.1E-105 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_1367 33c6f1a69f786cf9a0e10e224fecd95f 502 Gene3D G3DSA:3.30.300.310 395 495 8.6E-32 T 14-10-2018 Afer_1365 2eeaf95ace277a5f351dda77a0690512 183 Gene3D G3DSA:1.10.10.10 45 133 3.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1365 2eeaf95ace277a5f351dda77a0690512 183 Pfam PF03551 Transcriptional regulator PadR-like family 55 123 3.1E-20 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Afer_1365 2eeaf95ace277a5f351dda77a0690512 183 SUPERFAMILY SSF46785 52 175 2.48E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1663 27e8053241531a09d294693cbd61687a 291 TIGRFAM TIGR00761 argB: acetylglutamate kinase 27 263 6.6E-67 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Afer_1663 27e8053241531a09d294693cbd61687a 291 PRINTS PR00474 Glutamate 5-kinase family signature 238 258 5.0E-9 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Afer_1663 27e8053241531a09d294693cbd61687a 291 PRINTS PR00474 Glutamate 5-kinase family signature 185 212 5.0E-9 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Afer_1663 27e8053241531a09d294693cbd61687a 291 PRINTS PR00474 Glutamate 5-kinase family signature 58 72 5.0E-9 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Afer_1663 27e8053241531a09d294693cbd61687a 291 Hamap MF_00082 Acetylglutamate kinase [argB]. 25 281 40.954 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Afer_1663 27e8053241531a09d294693cbd61687a 291 Pfam PF00696 Amino acid kinase family 27 264 1.0E-44 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Afer_1663 27e8053241531a09d294693cbd61687a 291 PIRSF PIRSF000728 11 288 9.7E-86 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Afer_1663 27e8053241531a09d294693cbd61687a 291 Gene3D G3DSA:3.40.1160.10 3 290 2.1E-88 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Afer_1663 27e8053241531a09d294693cbd61687a 291 SUPERFAMILY SSF53633 9 288 3.4E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 SUPERFAMILY SSF53850 95 302 3.95E-35 T 14-10-2018 Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 5.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 5.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 5.6E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 SUPERFAMILY SSF46785 5 118 1.7E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 Gene3D G3DSA:1.10.10.10 11 96 1.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 Gene3D G3DSA:3.40.190.290 99 306 2.8E-32 T 14-10-2018 Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 69 1.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Afer_0434 4880f6ba1f5e10ea253b58608ce9c651 310 Pfam PF03466 LysR substrate binding domain 95 302 8.2E-39 T 14-10-2018 IPR005119 LysR, substrate-binding Afer_1442 a9edd06fd3d513a63897ad6079d7f167 408 SUPERFAMILY SSF53623 30 251 4.88E-21 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1442 a9edd06fd3d513a63897ad6079d7f167 408 Gene3D G3DSA:3.40.1190.10 20 254 2.4E-20 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1442 a9edd06fd3d513a63897ad6079d7f167 408 Pfam PF08353 Domain of unknown function (DUF1727) 280 380 6.5E-20 T 14-10-2018 IPR013564 Domain of unknown function DUF1727 Afer_1442 a9edd06fd3d513a63897ad6079d7f167 408 Pfam PF08245 Mur ligase middle domain 35 143 1.3E-8 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 SUPERFAMILY SSF55681 472 686 4.47E-24 T 14-10-2018 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Pfam PF01588 Putative tRNA binding domain 57 156 9.8E-17 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 786 6.0E-8 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Gene3D G3DSA:3.30.56.10 31 193 2.6E-45 T 14-10-2018 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Gene3D G3DSA:3.30.56.10 406 480 7.8E-11 T 14-10-2018 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Gene3D G3DSA:3.30.930.10 493 687 1.0E-27 T 14-10-2018 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 SMART SM00896 698 786 8.9E-7 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 SUPERFAMILY SSF50249 49 201 9.3E-33 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 786 6.3E-140 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Gene3D G3DSA:2.40.50.140 51 166 2.6E-45 T 14-10-2018 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 SUPERFAMILY SSF54991 698 786 3.01E-8 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Gene3D G3DSA:3.50.40.10 227 405 1.8E-53 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 SMART SM00874 406 476 1.5E-10 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Pfam PF03483 B3/4 domain 243 389 8.7E-49 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 781 28.317 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 SMART SM00873 221 394 1.1E-49 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 SUPERFAMILY SSF46955 434 479 1.19E-10 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 SUPERFAMILY SSF56037 242 389 6.28E-48 T 14-10-2018 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Gene3D G3DSA:3.30.70.380 700 790 4.5E-7 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 Afer_1673 5f08e8d4d915edb8bb1d7154c435c76c 791 Pfam PF03484 tRNA synthetase B5 domain 434 476 2.1E-10 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Afer_1324 be5cc8d765b513b8643837f5af56dccf 221 SUPERFAMILY SSF55166 24 210 1.05E-39 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Afer_1324 be5cc8d765b513b8643837f5af56dccf 221 Gene3D G3DSA:3.30.1380.10 36 208 1.2E-39 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Afer_1324 be5cc8d765b513b8643837f5af56dccf 221 Pfam PF01427 D-ala-D-ala dipeptidase 67 205 3.0E-15 T 14-10-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 Afer_1636 97fad40a392e35c6aa486bd6fdc17fdd 186 Pfam PF13470 PIN domain 6 112 5.0E-16 T 14-10-2018 IPR002716 PIN domain Afer_1636 97fad40a392e35c6aa486bd6fdc17fdd 186 SUPERFAMILY SSF88723 6 119 4.32E-6 T 14-10-2018 IPR029060 PIN-like domain superfamily Afer_1086 1cfd39afb0a7ae950575f9558a741d05 306 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 102 178 2.6E-27 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Afer_1086 1cfd39afb0a7ae950575f9558a741d05 306 SUPERFAMILY SSF53901 3 305 4.19E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1086 1cfd39afb0a7ae950575f9558a741d05 306 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 304 5.7E-102 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Afer_1086 1cfd39afb0a7ae950575f9558a741d05 306 Gene3D G3DSA:3.40.47.10 1 306 3.5E-116 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1086 1cfd39afb0a7ae950575f9558a741d05 306 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 215 304 4.0E-35 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Afer_1086 1cfd39afb0a7ae950575f9558a741d05 306 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 304 62.595 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 Hamap MF_01454 GTPase Obg [obg]. 3 327 41.509 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 Gene3D G3DSA:2.70.210.12 1 158 1.5E-49 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 Pfam PF01926 50S ribosome-binding GTPase 161 281 7.6E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 SUPERFAMILY SSF102741 351 420 1.14E-10 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 SUPERFAMILY SSF82051 4 158 9.16E-46 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 4 322 8.5E-114 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 Gene3D G3DSA:2.40.240.60 349 421 3.0E-10 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 PIRSF PIRSF002401 1 353 1.2E-115 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 Gene3D G3DSA:3.40.50.300 159 335 1.0E-44 T 14-10-2018 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 Pfam PF01018 GTP1/OBG 5 158 2.4E-50 T 14-10-2018 IPR006169 GTP1/OBG domain Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 SUPERFAMILY SSF52540 161 331 1.87E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 Pfam PF09269 Domain of unknown function (DUF1967) 356 418 2.2E-10 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 1.8E-31 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 1.8E-31 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 1.8E-31 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0773 d4c79bd2c33bcc1b201c73e279501be3 422 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 1.8E-31 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Gene3D G3DSA:3.40.50.300 459 968 4.2E-205 T 14-10-2018 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 151 1049 3.3E-268 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Gene3D G3DSA:3.30.2060.10 133 219 8.2E-56 T 14-10-2018 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SUPERFAMILY SSF52540 762 965 1.36E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Gene3D G3DSA:3.40.50.300 521 760 4.2E-205 T 14-10-2018 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SMART SM00490 805 889 8.5E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Pfam PF02559 CarD-like/TRCF domain 463 554 9.0E-20 T 14-10-2018 IPR003711 CarD-like/TRCF domain Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SMART SM01058 460 555 3.1E-28 T 14-10-2018 IPR003711 CarD-like/TRCF domain Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SUPERFAMILY SSF143517 974 1057 2.35E-19 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SUPERFAMILY SSF52540 34 285 2.48E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Pfam PF00271 Helicase conserved C-terminal domain 789 889 3.5E-14 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Gene3D G3DSA:2.30.30.840 464 520 4.2E-205 T 14-10-2018 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SUPERFAMILY SSF52540 505 763 5.98E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Gene3D G3DSA:3.90.1150.50 979 1082 9.2E-20 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Gene3D G3DSA:3.40.50.11180 43 286 8.2E-56 T 14-10-2018 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Pfam PF00270 DEAD/DEAH box helicase 584 743 6.9E-15 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 25 1069 24.694 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SUPERFAMILY SSF141259 457 522 2.48E-14 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SMART SM00982 983 1085 9.2E-18 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 SMART SM00487 579 769 4.3E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Afer_1594 0ce9a2994ad3792c5df807b4b5cdebb7 1131 Pfam PF03461 TRCF domain 985 1054 4.1E-17 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 Afer_1196 94796d5635bc1808bb44e9ccce87b3ac 156 Gene3D G3DSA:3.40.1400.10 2 148 7.2E-59 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Afer_1196 94796d5635bc1808bb44e9ccce87b3ac 156 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 5 147 1.3E-53 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Afer_1196 94796d5635bc1808bb44e9ccce87b3ac 156 SUPERFAMILY SSF89623 4 146 2.09E-54 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Afer_1196 94796d5635bc1808bb44e9ccce87b3ac 156 PIRSF PIRSF005384 3 148 3.5E-55 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Afer_1196 94796d5635bc1808bb44e9ccce87b3ac 156 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 5 146 2.5E-49 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 Afer_1196 94796d5635bc1808bb44e9ccce87b3ac 156 Pfam PF02502 Ribose/Galactose Isomerase 5 142 2.2E-52 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 Afer_0602 a12be9570304faebd48ebd9f4ce6ed4b 256 SUPERFAMILY SSF53474 5 251 9.01E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0602 a12be9570304faebd48ebd9f4ce6ed4b 256 Pfam PF00561 alpha/beta hydrolase fold 21 139 2.2E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_0602 a12be9570304faebd48ebd9f4ce6ed4b 256 Gene3D G3DSA:3.40.50.1820 2 253 4.7E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 Gene3D G3DSA:3.30.950.10 415 545 4.1E-51 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 Gene3D G3DSA:3.30.420.180 176 302 2.3E-28 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 Gene3D G3DSA:3.40.1010.10 303 414 4.4E-26 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 SUPERFAMILY SSF159664 181 302 7.32E-29 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 308 512 8.6E-37 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 Pfam PF11760 Cobalamin synthesis G N-terminal 27 107 4.8E-18 T 14-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 SUPERFAMILY SSF53790 302 544 3.14E-53 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 Gene3D G3DSA:3.40.50.11220 2 102 3.1E-12 T 14-10-2018 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 308 544 1.1E-76 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 Pfam PF01890 Cobalamin synthesis G C-terminus 185 299 7.0E-26 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 Afer_0802 ccd1e9c0d5be4f176f7c4a8ec251f93a 547 SUPERFAMILY SSF159672 23 119 3.27E-19 T 14-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 Pfam PF00459 Inositol monophosphatase family 27 229 5.4E-49 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 Gene3D G3DSA:3.30.540.10 6 142 4.0E-33 T 14-10-2018 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 83 96 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 212 226 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 209 233 1.2E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 178 199 1.2E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 1.2E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 83 99 1.2E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 132 155 1.2E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 1.2E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 Gene3D G3DSA:3.40.190.80 147 263 8.8E-33 T 14-10-2018 Afer_0644 8a97b9c106ba0bc1797a2e14cf448793 273 SUPERFAMILY SSF56655 14 260 4.32E-62 T 14-10-2018 Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 SUPERFAMILY SSF51011 478 555 1.44E-13 T 14-10-2018 Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 Pfam PF16657 Maltogenic Amylase, C-terminal domain 472 552 6.6E-20 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 Gene3D G3DSA:3.90.400.10 116 185 3.8E-206 T 14-10-2018 Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 Gene3D G3DSA:3.20.20.80 18 465 3.8E-206 T 14-10-2018 Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 Gene3D G3DSA:2.60.40.1180 472 558 1.3E-22 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 SMART SM00642 26 424 1.7E-105 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 Pfam PF00128 Alpha amylase, catalytic domain 41 393 9.8E-73 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 TIGRFAM TIGR02456 treS_nterm: trehalose synthase 18 555 4.6E-259 T 14-10-2018 IPR012810 Trehalose synthase/alpha-amylase, N-terminal GO:0003824|GO:0005975 KEGG: 00500+5.4.99.16|MetaCyc: PWY-2622|MetaCyc: PWY-7900 Afer_1778 68450c2eb664678c64cc5fef8ff3380b 558 SUPERFAMILY SSF51445 16 469 8.65E-133 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_1907 2a408b0b19d9bb3b2e0a7d5cf709ca66 270 SUPERFAMILY SSF53067 134 262 3.33E-33 T 14-10-2018 Afer_1907 2a408b0b19d9bb3b2e0a7d5cf709ca66 270 Pfam PF03309 Type III pantothenate kinase 6 215 1.2E-55 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Afer_1907 2a408b0b19d9bb3b2e0a7d5cf709ca66 270 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 6 259 4.7E-62 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Afer_1907 2a408b0b19d9bb3b2e0a7d5cf709ca66 270 Gene3D G3DSA:3.30.420.40 5 98 1.9E-15 T 14-10-2018 Afer_1907 2a408b0b19d9bb3b2e0a7d5cf709ca66 270 Gene3D G3DSA:3.30.420.40 99 269 1.6E-54 T 14-10-2018 Afer_1907 2a408b0b19d9bb3b2e0a7d5cf709ca66 270 SUPERFAMILY SSF53067 7 132 1.08E-21 T 14-10-2018 Afer_1907 2a408b0b19d9bb3b2e0a7d5cf709ca66 270 Hamap MF_01274 Type III pantothenate kinase [coaX]. 4 264 30.18 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 Afer_0797 4578b08546904791c9896b53d897a1b6 249 Gene3D G3DSA:3.10.129.10 4 233 4.6E-31 T 14-10-2018 Afer_0797 4578b08546904791c9896b53d897a1b6 249 SUPERFAMILY SSF54637 8 133 2.33E-14 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_0797 4578b08546904791c9896b53d897a1b6 249 SUPERFAMILY SSF54637 150 223 5.33E-6 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_0797 4578b08546904791c9896b53d897a1b6 249 Pfam PF01643 Acyl-ACP thioesterase 13 189 2.4E-20 T 14-10-2018 IPR002864 Acyl-ACP thioesterase GO:0006633|GO:0016790 Afer_1103 5bb4efe116a304141dc095cac267494d 495 SUPERFAMILY SSF56322 5 486 5.76E-125 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Afer_1103 5bb4efe116a304141dc095cac267494d 495 Pfam PF00425 chorismate binding enzyme 219 478 1.2E-85 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal Afer_1103 5bb4efe116a304141dc095cac267494d 495 Pfam PF04715 Anthranilate synthase component I, N terminal region 15 161 5.0E-23 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Afer_1103 5bb4efe116a304141dc095cac267494d 495 Gene3D G3DSA:3.60.120.10 1 494 7.1E-146 T 14-10-2018 IPR005801 ADC synthase GO:0009058 Afer_1103 5bb4efe116a304141dc095cac267494d 495 PRINTS PR00095 Anthranilate synthase component I signature 333 346 3.1E-14 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Afer_1103 5bb4efe116a304141dc095cac267494d 495 PRINTS PR00095 Anthranilate synthase component I signature 319 332 3.1E-14 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Afer_1103 5bb4efe116a304141dc095cac267494d 495 PRINTS PR00095 Anthranilate synthase component I signature 413 427 3.1E-14 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Afer_1848 42a96fa4b3897cbe332eeff8c16956fe 414 PIRSF PIRSF038945 43 410 4.0E-85 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Afer_1848 42a96fa4b3897cbe332eeff8c16956fe 414 TIGRFAM TIGR00260 thrC: threonine synthase 58 386 2.0E-89 T 14-10-2018 IPR004450 Threonine synthase-like Afer_1848 42a96fa4b3897cbe332eeff8c16956fe 414 SUPERFAMILY SSF53686 4 408 5.63E-95 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Afer_1848 42a96fa4b3897cbe332eeff8c16956fe 414 Gene3D G3DSA:3.40.50.1100 59 384 5.9E-110 T 14-10-2018 Afer_1848 42a96fa4b3897cbe332eeff8c16956fe 414 Gene3D G3DSA:3.40.50.1100 110 207 5.9E-110 T 14-10-2018 Afer_1848 42a96fa4b3897cbe332eeff8c16956fe 414 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 379 1.0E-71 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Afer_0285 30c599280f40246246befc42cd71e19d 213 SUPERFAMILY SSF46767 127 203 2.22E-28 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 Afer_0285 30c599280f40246246befc42cd71e19d 213 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 173 179 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Afer_0285 30c599280f40246246befc42cd71e19d 213 Gene3D G3DSA:1.10.10.10 122 204 1.1E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0285 30c599280f40246246befc42cd71e19d 213 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 128 202 2.3E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Afer_0285 30c599280f40246246befc42cd71e19d 213 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 127 202 9.6E-30 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 Afer_0285 30c599280f40246246befc42cd71e19d 213 SUPERFAMILY SSF53155 50 119 3.14E-7 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 Afer_0285 30c599280f40246246befc42cd71e19d 213 Gene3D G3DSA:3.30.160.70 50 118 1.4E-7 T 14-10-2018 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 ProSitePatterns PS00938 Initiation factor 3 signature. 52 65 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 163 1.4E-57 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 70 1.2E-28 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 164 26.624 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 SUPERFAMILY SSF54364 1 72 1.26E-25 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 SUPERFAMILY SSF55200 78 162 5.1E-31 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 Gene3D G3DSA:3.30.110.10 73 167 1.8E-33 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 161 2.6E-34 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 Afer_1678 3eb376231a987fb07b4ea3ddaa91894b 170 Gene3D G3DSA:3.10.20.80 1 72 7.0E-29 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 Afer_0028 065517b45ab0f9dc4effb4eabfc47999 280 Gene3D G3DSA:3.30.1180.10 155 278 3.4E-27 T 14-10-2018 Afer_0028 065517b45ab0f9dc4effb4eabfc47999 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 275 5.4E-72 T 14-10-2018 IPR003797 DegV Afer_0028 065517b45ab0f9dc4effb4eabfc47999 280 Gene3D G3DSA:3.40.50.10170 1 153 7.7E-44 T 14-10-2018 Afer_0028 065517b45ab0f9dc4effb4eabfc47999 280 SUPERFAMILY SSF82549 3 275 2.28E-64 T 14-10-2018 Afer_0028 065517b45ab0f9dc4effb4eabfc47999 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 276 2.2E-70 T 14-10-2018 IPR003797 DegV Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 SUPERFAMILY SSF52833 4 160 8.75E-51 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 PIRSF PIRSF000303 2 160 7.8E-59 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 Gene3D G3DSA:3.40.30.10 3 160 7.6E-57 T 14-10-2018 Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 Pfam PF00255 Glutathione peroxidase 4 109 4.0E-39 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 PRINTS PR01011 Glutathione peroxidase family signature 122 131 7.4E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 PRINTS PR01011 Glutathione peroxidase family signature 21 38 7.4E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Afer_1201 13feb5b1de1e346e2b25f407df47c6c6 160 PRINTS PR01011 Glutathione peroxidase family signature 56 72 7.4E-21 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 Pfam PF00732 GMC oxidoreductase 6 279 7.1E-74 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 237 251 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 SUPERFAMILY SSF54373 273 455 4.61E-33 T 14-10-2018 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 PIRSF PIRSF000137 1 518 7.8E-127 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 SUPERFAMILY SSF51905 2 513 6.64E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 Gene3D G3DSA:3.30.410.40 135 452 8.9E-151 T 14-10-2018 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 Pfam PF05199 GMC oxidoreductase 364 504 4.1E-32 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 Gene3D G3DSA:4.10.450.10 38 179 8.9E-151 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 81 104 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 Gene3D G3DSA:3.50.50.60 5 509 8.9E-151 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1091 40d2b6713386c55deecc3038b75c59ba 518 Gene3D G3DSA:1.10.1220.110 96 134 8.9E-151 T 14-10-2018 Afer_0313 0c64316a343c06e12cb0d5c3820dec7a 248 Gene3D G3DSA:1.10.1060.10 119 247 6.3E-47 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0313 0c64316a343c06e12cb0d5c3820dec7a 248 SUPERFAMILY SSF54292 15 118 3.64E-28 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Afer_0313 0c64316a343c06e12cb0d5c3820dec7a 248 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 23 240 9.7E-76 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0313 0c64316a343c06e12cb0d5c3820dec7a 248 Pfam PF13237 4Fe-4S dicluster domain 156 227 1.6E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_0313 0c64316a343c06e12cb0d5c3820dec7a 248 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 160 171 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_0313 0c64316a343c06e12cb0d5c3820dec7a 248 SUPERFAMILY SSF46548 119 244 2.44E-33 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0313 0c64316a343c06e12cb0d5c3820dec7a 248 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 21 123 1.6E-33 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0313 0c64316a343c06e12cb0d5c3820dec7a 248 Gene3D G3DSA:3.10.20.30 8 118 6.4E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 SUPERFAMILY SSF57783 3 97 5.27E-31 T 14-10-2018 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 Pfam PF13155 Toprim-like 258 340 9.9E-16 T 14-10-2018 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 SMART SM00400 34 88 7.8E-32 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 Hamap MF_00974 DNA primase [dnaG]. 2 554 23.787 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 TIGRFAM TIGR01391 dnaG: DNA primase 7 407 5.4E-113 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 Gene3D G3DSA:3.90.580.10 2 100 1.2E-34 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 SUPERFAMILY SSF56731 114 413 2.04E-79 T 14-10-2018 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 Pfam PF08275 DNA primase catalytic core, N-terminal domain 121 246 1.4E-29 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 Gene3D G3DSA:3.40.1360.10 236 355 6.4E-34 T 14-10-2018 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 Gene3D G3DSA:3.90.980.10 111 235 3.6E-28 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 Pfam PF01807 CHC2 zinc finger 6 98 8.6E-33 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 SMART SM00493 254 324 1.8E-15 T 14-10-2018 IPR006171 TOPRIM domain Afer_1261 446e8016c2de7b9ed41bad2690b055b5 588 Pfam PF10410 DnaB-helicase binding domain of primase 361 413 7.6E-14 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 Afer_1213 d5d06919d5833fae4bfbfc1abdc8b48d 541 Gene3D G3DSA:1.20.1740.10 11 445 9.6E-67 T 14-10-2018 Afer_1213 d5d06919d5833fae4bfbfc1abdc8b48d 541 Pfam PF13520 Amino acid permease 17 418 3.9E-41 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1213 d5d06919d5833fae4bfbfc1abdc8b48d 541 PIRSF PIRSF006060 1 462 7.5E-78 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1213 d5d06919d5833fae4bfbfc1abdc8b48d 541 PIRSF PIRSF006060 462 519 3.8 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1394 21819859829d4ef3f09bbf1d9b76ae94 651 SUPERFAMILY SSF53335 89 452 3.25E-55 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1394 21819859829d4ef3f09bbf1d9b76ae94 651 PIRSF PIRSF015855 4 651 7.2E-165 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Afer_1394 21819859829d4ef3f09bbf1d9b76ae94 651 Pfam PF01555 DNA methylase 121 436 1.3E-29 T 14-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 Afer_1394 21819859829d4ef3f09bbf1d9b76ae94 651 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 183 202 1.1E-13 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Afer_1394 21819859829d4ef3f09bbf1d9b76ae94 651 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 121 133 1.1E-13 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Afer_1394 21819859829d4ef3f09bbf1d9b76ae94 651 PRINTS PR00506 D21 class N6 adenine-specific DNA methyltransferase signature 417 431 1.1E-13 T 14-10-2018 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class GO:0003677|GO:0006306|GO:0008170 Afer_1394 21819859829d4ef3f09bbf1d9b76ae94 651 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Afer_1873 6d899650932bd700067985e245139cf9 340 SUPERFAMILY SSF54211 204 327 9.48E-9 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_1873 6d899650932bd700067985e245139cf9 340 Gene3D G3DSA:2.30.42.10 127 198 2.1E-7 T 14-10-2018 Afer_1873 6d899650932bd700067985e245139cf9 340 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 223 298 4.7E-6 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 Afer_1873 6d899650932bd700067985e245139cf9 340 Gene3D G3DSA:3.30.230.10 199 329 2.4E-6 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_1873 6d899650932bd700067985e245139cf9 340 SUPERFAMILY SSF50156 131 201 1.29E-7 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Afer_0868 6f86791aa6827e6e5a6a18a770d9f4a8 130 Pfam PF07681 DoxX 9 89 1.1E-14 T 14-10-2018 IPR032808 DoxX family Afer_1160 4c578e9ce6012607e63284a2057a0861 185 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 11 97 7.5E-5 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Afer_1160 4c578e9ce6012607e63284a2057a0861 185 SUPERFAMILY SSF50475 11 125 4.64E-8 T 14-10-2018 Afer_1160 4c578e9ce6012607e63284a2057a0861 185 Gene3D G3DSA:2.30.110.10 7 130 1.9E-9 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 Pfam PF00990 Diguanylate cyclase, GGDEF domain 384 484 8.7E-14 T 14-10-2018 IPR000160 GGDEF domain Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 SUPERFAMILY SSF55781 145 303 5.02E-12 T 14-10-2018 Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 Gene3D G3DSA:3.20.20.450 545 805 6.4E-71 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 SMART SM00052 542 793 4.9E-67 T 14-10-2018 IPR001633 EAL domain Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 SUPERFAMILY SSF141868 555 801 3.4E-62 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 Gene3D G3DSA:3.30.70.270 373 536 2.5E-20 T 14-10-2018 Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 SMART SM00267 373 534 7.8E-11 T 14-10-2018 IPR000160 GGDEF domain Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 Pfam PF00563 EAL domain 553 788 3.0E-61 T 14-10-2018 IPR001633 EAL domain Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 SUPERFAMILY SSF55073 389 505 1.49E-15 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 Gene3D G3DSA:3.30.450.40 143 304 3.9E-12 T 14-10-2018 IPR029016 GAF-like domain superfamily Afer_1469 6bd964af3ac49a4d85e21b003a8ba9d6 806 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 382 484 5.4E-14 T 14-10-2018 IPR000160 GGDEF domain Afer_1620 f3269e8e9e6199a469545d24f9925e2a 130 Gene3D G3DSA:3.40.50.1010 2 127 4.5E-6 T 14-10-2018 Afer_1620 f3269e8e9e6199a469545d24f9925e2a 130 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 3 126 10.426 T 14-10-2018 IPR022907 VapC family GO:0004540 Afer_1620 f3269e8e9e6199a469545d24f9925e2a 130 Pfam PF01850 PIN domain 4 119 9.1E-12 T 14-10-2018 IPR002716 PIN domain Afer_1620 f3269e8e9e6199a469545d24f9925e2a 130 SUPERFAMILY SSF88723 3 127 7.85E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily Afer_1515 12c2a09885a2b7f4ff81acbb705e5fd2 177 SUPERFAMILY SSF53335 2 173 3.03E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1515 12c2a09885a2b7f4ff81acbb705e5fd2 177 Gene3D G3DSA:3.40.50.150 1 176 1.6E-39 T 14-10-2018 Afer_1515 12c2a09885a2b7f4ff81acbb705e5fd2 177 PIRSF PIRSF004553 1 176 7.4E-37 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 Afer_1515 12c2a09885a2b7f4ff81acbb705e5fd2 177 Pfam PF03602 Conserved hypothetical protein 95 2 171 1.8E-34 T 14-10-2018 Afer_1515 12c2a09885a2b7f4ff81acbb705e5fd2 177 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 Pfam PF00448 SRP54-type protein, GTPase domain 150 348 1.0E-71 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 322 335 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 SMART SM00963 59 136 0.0045 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 83 348 1.0E-95 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 Gene3D G3DSA:3.40.50.300 150 337 1.9E-95 T 14-10-2018 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 81 349 56.426 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 SUPERFAMILY SSF52540 148 350 7.54E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 SMART SM00962 150 349 3.6E-103 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 SUPERFAMILY SSF47364 84 156 5.23E-6 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 Gene3D G3DSA:1.20.120.140 82 347 1.9E-95 T 14-10-2018 Afer_1503 32d11f0a2fd574ad819c9a06be1b4ff5 367 SMART SM00382 149 327 2.6E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 37 47 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 Gene3D G3DSA:3.10.290.10 324 410 5.7E-18 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 406 1.4E-103 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 Gene3D G3DSA:3.40.50.620 1 219 2.9E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 SUPERFAMILY SSF52374 4 320 4.69E-88 T 14-10-2018 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 Gene3D G3DSA:1.10.240.10 220 323 7.7E-35 T 14-10-2018 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 213 225 1.4E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 159 174 1.4E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 180 202 1.4E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 41 63 1.4E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 Pfam PF00579 tRNA synthetases class I (W and Y) 30 321 6.1E-68 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 SUPERFAMILY SSF55174 303 406 2.49E-13 T 14-10-2018 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 Pfam PF01479 S4 domain 347 386 4.9E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1624 98fb894e4dfb842b40f1675eeebc67d5 411 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 407 39.593 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 Afer_0421 65b2f357ff0b5467be69becd4c3922b1 74 SUPERFAMILY SSF50249 5 74 7.24E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0421 65b2f357ff0b5467be69becd4c3922b1 74 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 3 74 27.248 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Afer_0421 65b2f357ff0b5467be69becd4c3922b1 74 Pfam PF01176 Translation initiation factor 1A / IF-1 12 72 7.4E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 Afer_0421 65b2f357ff0b5467be69becd4c3922b1 74 Gene3D G3DSA:2.40.50.140 1 74 1.6E-37 T 14-10-2018 Afer_0421 65b2f357ff0b5467be69becd4c3922b1 74 SMART SM00316 6 74 2.4E-5 T 14-10-2018 IPR022967 RNA-binding domain, S1 Afer_0421 65b2f357ff0b5467be69becd4c3922b1 74 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 5 73 2.8E-37 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 Afer_0131 e070b7aba54f320c5d251b0c0bbdc108 268 Gene3D G3DSA:3.40.50.300 21 188 2.0E-29 T 14-10-2018 Afer_0131 e070b7aba54f320c5d251b0c0bbdc108 268 Pfam PF07728 AAA domain (dynein-related subfamily) 36 170 1.3E-30 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Afer_0131 e070b7aba54f320c5d251b0c0bbdc108 268 SUPERFAMILY SSF52540 6 232 8.3E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0131 e070b7aba54f320c5d251b0c0bbdc108 268 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 183 266 5.7E-32 T 14-10-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 Gene3D G3DSA:2.40.30.10 197 297 6.1E-25 T 14-10-2018 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 Pfam PF00009 Elongation factor Tu GTP binding domain 2 193 6.3E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 SUPERFAMILY SSF50447 156 296 1.65E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 3 595 6.0E-251 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 PRINTS PR00315 GTP-binding elongation factor signature 69 79 3.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 PRINTS PR00315 GTP-binding elongation factor signature 121 130 3.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 PRINTS PR00315 GTP-binding elongation factor signature 85 96 3.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 PRINTS PR00315 GTP-binding elongation factor signature 5 18 3.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 Pfam PF00679 Elongation factor G C-terminus 394 475 3.0E-15 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 Gene3D G3DSA:3.40.50.300 2 196 1.3E-61 T 14-10-2018 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 Gene3D G3DSA:3.30.70.870 305 587 6.3E-113 T 14-10-2018 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 SUPERFAMILY SSF52540 3 204 8.04E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 SUPERFAMILY SSF54980 300 385 4.8E-11 T 14-10-2018 IPR035647 EF-G domain III/V-like Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 Gene3D G3DSA:2.40.50.250 480 595 6.3E-113 T 14-10-2018 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 147 3.9E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 SUPERFAMILY SSF54980 396 510 5.28E-22 T 14-10-2018 IPR035647 EF-G domain III/V-like Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 Pfam PF03144 Elongation factor Tu domain 2 217 287 2.5E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Afer_0578 da01c02703c4fa169135ea2d45aa8513 609 Gene3D G3DSA:3.30.70.240 387 479 6.3E-113 T 14-10-2018 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 6.6E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 SUPERFAMILY SSF46894 139 211 7.82E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 SMART SM00421 152 209 4.0E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 Pfam PF00072 Response regulator receiver domain 5 117 9.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 SMART SM00448 3 117 2.6E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 SUPERFAMILY SSF52172 3 131 7.54E-26 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 Gene3D G3DSA:3.40.50.12740 3 213 1.0E-53 T 14-10-2018 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.9E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.9E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_0180 4633c05d26a2f8b77e560a5f4704c6b8 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.9E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 SMART SM00421 148 205 4.0E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 SUPERFAMILY SSF52172 3 181 1.99E-32 T 14-10-2018 IPR011006 CheY-like superfamily Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 203 1.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 8.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 8.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 8.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 Pfam PF00072 Response regulator receiver domain 4 115 4.8E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 Gene3D G3DSA:3.40.50.12740 2 208 1.9E-63 T 14-10-2018 Afer_1446 01abcc7af21cf55b8b415bf94f3eb684 223 SMART SM00448 2 115 1.8E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1197 7deb1e7bca49d1903e4b57c2e828e47b 158 Pfam PF10759 Protein of unknown function (DUF2587) 18 151 3.5E-55 T 14-10-2018 IPR019695 Bacterial proteasome activator GO:0061136 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 Gene3D G3DSA:3.40.50.620 1 158 2.1E-51 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 33.217 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 1.6E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 1.6E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.6E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 1.6E-35 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 Pfam PF01467 Cytidylyltransferase-like 5 133 6.1E-19 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 SUPERFAMILY SSF52374 2 153 4.41E-43 T 14-10-2018 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 64 8.1E-18 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 11 64 2.0E-4 T 14-10-2018 Afer_1514 9bfcf514f125c7f8351a15653f036a7f 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 154 8.0E-55 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 Gene3D G3DSA:3.40.50.10990 216 389 7.1E-72 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 Pfam PF00925 GTP cyclohydrolase II 221 386 4.6E-71 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 14 206 3.1E-80 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 8 211 36.584 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 Gene3D G3DSA:3.90.870.10 2 214 5.7E-85 T 14-10-2018 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 PIRSF PIRSF001259 8 416 3.6E-172 T 14-10-2018 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 212 412 39.174 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 SUPERFAMILY SSF142695 220 388 1.11E-66 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 10 207 1.8E-66 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 SUPERFAMILY SSF55821 10 214 6.41E-76 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 9 408 50.017 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Afer_1683 b8dcea4de8ba1f9d6ac4a00755bee169 417 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 220 410 6.3E-71 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 Afer_0321 c455d47a894b2f4ba4c0e1644e8bfc76 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 184 2.1E-51 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Afer_0321 c455d47a894b2f4ba4c0e1644e8bfc76 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 131 154 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Afer_0321 c455d47a894b2f4ba4c0e1644e8bfc76 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 185 27.036 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 Afer_0321 c455d47a894b2f4ba4c0e1644e8bfc76 212 SUPERFAMILY SSF53328 2 184 1.83E-44 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Afer_0321 c455d47a894b2f4ba4c0e1644e8bfc76 212 Gene3D G3DSA:3.40.50.170 1 196 7.9E-59 T 14-10-2018 Afer_0321 c455d47a894b2f4ba4c0e1644e8bfc76 212 Pfam PF00551 Formyl transferase 2 179 2.4E-39 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 Hamap MF_00050 Elongation factor Ts [tsf]. 1 263 52.009 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 ProSitePatterns PS01126 Elongation factor Ts signature 1. 10 25 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 Gene3D G3DSA:1.10.8.10 1 53 1.2E-19 T 14-10-2018 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 SUPERFAMILY SSF54713 56 262 4.36E-37 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 Gene3D G3DSA:3.30.479.20 55 135 8.2E-14 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 Pfam PF00889 Elongation factor TS 70 262 5.5E-49 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 Gene3D G3DSA:1.10.286.20 184 230 5.6E-35 T 14-10-2018 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 SUPERFAMILY SSF46934 2 53 2.48E-14 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 Gene3D G3DSA:3.30.479.20 154 262 5.6E-35 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 Afer_0627 3892006a8cccbe23b5413f36823f7f22 263 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 2 262 1.9E-67 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Afer_0940 1ec6c61fadce77b603a1d36cd4867e67 462 SUPERFAMILY SSF53383 86 447 3.72E-53 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0940 1ec6c61fadce77b603a1d36cd4867e67 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 89 5.6E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_0940 1ec6c61fadce77b603a1d36cd4867e67 462 Pfam PF00155 Aminotransferase class I and II 159 436 1.7E-17 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Afer_0940 1ec6c61fadce77b603a1d36cd4867e67 462 Gene3D G3DSA:3.40.640.10 139 433 6.9E-43 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0940 1ec6c61fadce77b603a1d36cd4867e67 462 SMART SM00345 30 89 2.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_0940 1ec6c61fadce77b603a1d36cd4867e67 462 SUPERFAMILY SSF46785 28 93 7.26E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0940 1ec6c61fadce77b603a1d36cd4867e67 462 Gene3D G3DSA:1.10.10.10 28 101 4.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.3E-48 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.9E-60 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 SUPERFAMILY SSF54686 1 138 5.63E-57 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 40.502 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 Gene3D G3DSA:3.90.1170.10 1 143 2.6E-54 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 PRINTS PR00060 Ribosomal protein L16 signature 88 117 8.5E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 PRINTS PR00060 Ribosomal protein L16 signature 24 36 8.5E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 PRINTS PR00060 Ribosomal protein L16 signature 42 53 8.5E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0405 63ef0317829ecdd876b4faf477bf9b62 145 PRINTS PR00060 Ribosomal protein L16 signature 58 87 8.5E-41 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1921 29f48558dd68270662533aebb33683f9 850 Pfam PF01751 Toprim domain 5 126 1.4E-24 T 14-10-2018 IPR006171 TOPRIM domain Afer_1921 29f48558dd68270662533aebb33683f9 850 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 91 104 3.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 3.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 175 193 3.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 393 409 3.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 506 520 3.0E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 Pfam PF01131 DNA topoisomerase 141 580 3.7E-113 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 752 50.449 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 Pfam PF13368 Topoisomerase C-terminal repeat 731 784 1.7E-13 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Afer_1921 29f48558dd68270662533aebb33683f9 850 Pfam PF13368 Topoisomerase C-terminal repeat 794 845 6.2E-20 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Afer_1921 29f48558dd68270662533aebb33683f9 850 Pfam PF13368 Topoisomerase C-terminal repeat 674 726 5.9E-12 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Afer_1921 29f48558dd68270662533aebb33683f9 850 Pfam PF13368 Topoisomerase C-terminal repeat 618 664 6.1E-12 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat Afer_1921 29f48558dd68270662533aebb33683f9 850 Gene3D G3DSA:1.10.460.10 148 583 1.9E-153 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 Afer_1921 29f48558dd68270662533aebb33683f9 850 SMART SM00436 117 205 6.7E-38 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 310 324 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 Afer_1921 29f48558dd68270662533aebb33683f9 850 SMART SM00437 273 543 1.4E-107 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 SUPERFAMILY SSF56712 3 584 6.67E-169 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain Afer_1921 29f48558dd68270662533aebb33683f9 850 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 643 3.0E-222 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 Afer_1921 29f48558dd68270662533aebb33683f9 850 Gene3D G3DSA:2.70.20.10 197 490 1.9E-153 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 Afer_1921 29f48558dd68270662533aebb33683f9 850 SMART SM00493 3 117 2.6E-33 T 14-10-2018 IPR006171 TOPRIM domain Afer_1921 29f48558dd68270662533aebb33683f9 850 Gene3D G3DSA:1.10.290.10 281 408 1.9E-153 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 Afer_1921 29f48558dd68270662533aebb33683f9 850 Gene3D G3DSA:3.40.50.140 2 147 1.1E-54 T 14-10-2018 Afer_0901 69083bb8e14d9abb8d072390b11b2263 240 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 221 8.8E-30 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 Afer_0901 69083bb8e14d9abb8d072390b11b2263 240 SUPERFAMILY SSF100950 15 232 2.3E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Afer_0901 69083bb8e14d9abb8d072390b11b2263 240 Gene3D G3DSA:3.40.50.1360 4 233 3.2E-39 T 14-10-2018 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 Gene3D G3DSA:3.40.50.300 7 600 1.4E-237 T 14-10-2018 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 Hamap MF_00205 UvrABC system protein A [uvrA]. 2 943 21.862 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 ProSitePatterns PS00211 ABC transporters family signature. 833 847 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 SUPERFAMILY SSF52540 5 574 6.52E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 ProSitePatterns PS00211 ABC transporters family signature. 492 506 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 Gene3D G3DSA:1.10.8.280 292 408 1.4E-237 T 14-10-2018 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 Gene3D G3DSA:3.40.50.300 621 939 5.1E-142 T 14-10-2018 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 Pfam PF00005 ABC transporter 629 863 3.4E-8 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 Gene3D G3DSA:1.20.1580.10 695 833 5.1E-142 T 14-10-2018 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 SUPERFAMILY SSF52540 621 917 2.81E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 Gene3D G3DSA:1.20.1580.10 91 497 1.4E-237 T 14-10-2018 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 Gene3D G3DSA:3.30.190.20 131 242 1.4E-237 T 14-10-2018 Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 SMART SM00382 636 909 1.6E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0844 f0748a1a1cf7a278dfe090a8dcb1009d 945 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 928 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 Afer_1013 c99151980b78d58f0944886072ccfacf 667 SUPERFAMILY SSF52540 3 413 1.09E-130 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1013 c99151980b78d58f0944886072ccfacf 667 Gene3D G3DSA:4.10.860.10 611 663 2.9E-6 T 14-10-2018 Afer_1013 c99151980b78d58f0944886072ccfacf 667 Pfam PF12344 Ultra-violet resistance protein B 550 591 2.1E-19 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain Afer_1013 c99151980b78d58f0944886072ccfacf 667 Gene3D G3DSA:3.40.50.300 1 241 5.0E-77 T 14-10-2018 Afer_1013 c99151980b78d58f0944886072ccfacf 667 SMART SM00487 9 424 8.7E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Afer_1013 c99151980b78d58f0944886072ccfacf 667 SUPERFAMILY SSF46600 616 661 1.44E-10 T 14-10-2018 IPR036876 UVR domain superfamily Afer_1013 c99151980b78d58f0944886072ccfacf 667 Pfam PF00271 Helicase conserved C-terminal domain 432 542 6.9E-17 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1013 c99151980b78d58f0944886072ccfacf 667 SUPERFAMILY SSF52540 329 556 1.91E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1013 c99151980b78d58f0944886072ccfacf 667 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 660 42.478 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Afer_1013 c99151980b78d58f0944886072ccfacf 667 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 657 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 Afer_1013 c99151980b78d58f0944886072ccfacf 667 Gene3D G3DSA:3.40.50.300 413 594 3.3E-50 T 14-10-2018 Afer_1013 c99151980b78d58f0944886072ccfacf 667 Pfam PF04851 Type III restriction enzyme, res subunit 16 137 6.6E-8 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Afer_1013 c99151980b78d58f0944886072ccfacf 667 Gene3D G3DSA:3.40.50.300 275 412 8.5E-52 T 14-10-2018 Afer_1013 c99151980b78d58f0944886072ccfacf 667 SMART SM00490 458 544 6.6E-18 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1013 c99151980b78d58f0944886072ccfacf 667 Pfam PF02151 UvrB/uvrC motif 626 659 1.5E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 Afer_1794 d7fc05b47033fa21c7325a3402e54d44 130 Gene3D G3DSA:2.60.15.10 1 127 1.1E-16 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1794 d7fc05b47033fa21c7325a3402e54d44 130 SUPERFAMILY SSF51344 4 85 2.22E-13 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1794 d7fc05b47033fa21c7325a3402e54d44 130 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 90 4.0E-5 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1794 d7fc05b47033fa21c7325a3402e54d44 130 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 130 13.377 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1794 d7fc05b47033fa21c7325a3402e54d44 130 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 9 84 4.3E-14 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1036 31d469cd9542b613446880d0c168954c 672 Pfam PF07690 Major Facilitator Superfamily 26 418 1.7E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1036 31d469cd9542b613446880d0c168954c 672 Gene3D G3DSA:1.20.1720.10 22 226 3.6E-53 T 14-10-2018 Afer_1036 31d469cd9542b613446880d0c168954c 672 SUPERFAMILY SSF103473 23 506 1.05E-67 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1036 31d469cd9542b613446880d0c168954c 672 PRINTS PR01036 Tetracycline resistance protein TetB signature 84 106 3.8E-7 T 14-10-2018 Afer_1036 31d469cd9542b613446880d0c168954c 672 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 3.8E-7 T 14-10-2018 Afer_1036 31d469cd9542b613446880d0c168954c 672 PRINTS PR01036 Tetracycline resistance protein TetB signature 210 228 3.8E-7 T 14-10-2018 Afer_1036 31d469cd9542b613446880d0c168954c 672 PRINTS PR01036 Tetracycline resistance protein TetB signature 409 428 3.8E-7 T 14-10-2018 Afer_1036 31d469cd9542b613446880d0c168954c 672 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 3.8E-7 T 14-10-2018 Afer_1036 31d469cd9542b613446880d0c168954c 672 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 23 498 5.5E-78 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Afer_0289 d373c44257392a746db3ef32e06f0dd6 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 219 8.7E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_0289 d373c44257392a746db3ef32e06f0dd6 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Afer_0289 d373c44257392a746db3ef32e06f0dd6 257 Gene3D G3DSA:3.90.226.10 2 198 2.7E-74 T 14-10-2018 Afer_0289 d373c44257392a746db3ef32e06f0dd6 257 SUPERFAMILY SSF52096 4 227 2.58E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1969 1d3e7a389bb553b4ff5e84b19d44cacf 487 Pfam PF00324 Amino acid permease 30 466 4.3E-35 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Afer_1969 1d3e7a389bb553b4ff5e84b19d44cacf 487 Gene3D G3DSA:1.20.1740.10 13 464 3.1E-48 T 14-10-2018 Afer_1969 1d3e7a389bb553b4ff5e84b19d44cacf 487 PIRSF PIRSF006060 1 485 1.5E-72 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1787 a9c2ac125cbf648381fb22daa1fdbfc2 312 SUPERFAMILY SSF51735 105 265 6.65E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1787 a9c2ac125cbf648381fb22daa1fdbfc2 312 SUPERFAMILY SSF50129 5 142 2.28E-32 T 14-10-2018 IPR011032 GroES-like superfamily Afer_1787 a9c2ac125cbf648381fb22daa1fdbfc2 312 Gene3D G3DSA:3.90.180.10 8 307 1.2E-74 T 14-10-2018 Afer_1787 a9c2ac125cbf648381fb22daa1fdbfc2 312 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 20 115 1.1E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Afer_1787 a9c2ac125cbf648381fb22daa1fdbfc2 312 Pfam PF00107 Zinc-binding dehydrogenase 144 251 1.9E-16 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Afer_1787 a9c2ac125cbf648381fb22daa1fdbfc2 312 SMART SM00829 5 307 7.6E-16 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Afer_1787 a9c2ac125cbf648381fb22daa1fdbfc2 312 Gene3D G3DSA:3.40.50.720 113 246 1.2E-74 T 14-10-2018 Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 326 339 7.7E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 267 281 7.7E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 320 7.7E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 295 7.7E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 SMART SM00388 120 185 4.0E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 SUPERFAMILY SSF47384 106 185 1.04E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 Gene3D G3DSA:3.30.565.10 190 342 2.1E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 SMART SM00387 230 342 1.1E-41 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 Gene3D G3DSA:1.10.287.130 111 188 1.2E-21 T 14-10-2018 Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 231 340 1.3E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 SUPERFAMILY SSF55874 174 340 1.57E-47 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0201 1dd6af718ccfe331e5cb2f28a96427ff 347 Pfam PF00512 His Kinase A (phospho-acceptor) domain 121 185 8.6E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_1574 5eacc68632a286b8b84eb15ab40bd955 261 SMART SM00382 34 233 5.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1574 5eacc68632a286b8b84eb15ab40bd955 261 SUPERFAMILY SSF52540 9 234 5.12E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1574 5eacc68632a286b8b84eb15ab40bd955 261 Gene3D G3DSA:3.40.50.300 5 244 5.2E-59 T 14-10-2018 Afer_1574 5eacc68632a286b8b84eb15ab40bd955 261 Pfam PF00005 ABC transporter 25 176 1.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1574 5eacc68632a286b8b84eb15ab40bd955 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0491 03d088b6b3b5a6fc84615d4180b68127 331 Gene3D G3DSA:1.50.10.20 2 142 1.6E-5 T 14-10-2018 Afer_0491 03d088b6b3b5a6fc84615d4180b68127 331 SUPERFAMILY SSF48208 11 317 2.89E-15 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 265 338 6.2E-28 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 Gene3D G3DSA:3.40.50.300 30 193 4.3E-38 T 14-10-2018 Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 Gene3D G3DSA:1.10.10.10 269 347 7.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 SUPERFAMILY SSF52540 32 263 2.23E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 277 344 1.0E-14 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 Gene3D G3DSA:1.10.8.60 194 268 7.4E-30 T 14-10-2018 Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 351 147.465 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 25 247 1.2E-104 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 36 338 2.8E-130 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 SUPERFAMILY SSF46785 268 342 3.67E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1215 f1b5ae64c92f67a509332abc03247ad9 351 SMART SM00382 63 194 5.4E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 PRINTS PR00773 GrpE protein signature 105 120 1.1E-18 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 PRINTS PR00773 GrpE protein signature 183 202 1.1E-18 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 PRINTS PR00773 GrpE protein signature 77 93 1.1E-18 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 PRINTS PR00773 GrpE protein signature 158 173 1.1E-18 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 SUPERFAMILY SSF58014 59 150 1.57E-16 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 Pfam PF01025 GrpE 52 203 5.8E-35 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 Gene3D G3DSA:3.90.20.20 36 148 7.1E-18 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 SUPERFAMILY SSF51064 151 203 1.16E-11 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 Hamap MF_01151 Protein GrpE [grpE]. 7 204 14.732 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 ProSitePatterns PS01071 grpE protein signature. 161 202 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 Afer_1961 26e05ad755a2b8fffaf5ed842cdf58d0 205 Gene3D G3DSA:2.30.22.10 150 205 1.7E-15 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 SMART SM00267 111 282 3.1E-44 T 14-10-2018 IPR000160 GGDEF domain Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 Gene3D G3DSA:3.30.70.270 117 281 1.1E-48 T 14-10-2018 Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 119 274 2.4E-40 T 14-10-2018 IPR000160 GGDEF domain Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 Pfam PF00563 EAL domain 308 522 3.7E-41 T 14-10-2018 IPR001633 EAL domain Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 Gene3D G3DSA:3.20.20.450 285 560 6.8E-48 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 SUPERFAMILY SSF55073 127 274 1.8E-38 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 SMART SM00052 297 527 1.4E-22 T 14-10-2018 IPR001633 EAL domain Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 SUPERFAMILY SSF141868 305 523 1.96E-45 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1156 3dabc9b2db1afdbd0a7dee97c0477cba 626 Pfam PF00990 Diguanylate cyclase, GGDEF domain 122 274 6.1E-42 T 14-10-2018 IPR000160 GGDEF domain Afer_0605 cb51a8263c128ff3b23f1fa7047f33cd 326 SUPERFAMILY SSF116726 251 316 2.09E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Afer_0605 cb51a8263c128ff3b23f1fa7047f33cd 326 SUPERFAMILY SSF51735 114 244 5.92E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0605 cb51a8263c128ff3b23f1fa7047f33cd 326 Gene3D G3DSA:1.10.287.70 3 110 2.5E-20 T 14-10-2018 Afer_0605 cb51a8263c128ff3b23f1fa7047f33cd 326 Gene3D G3DSA:3.40.50.720 112 249 1.3E-16 T 14-10-2018 Afer_0605 cb51a8263c128ff3b23f1fa7047f33cd 326 Pfam PF02254 TrkA-N domain 116 223 2.4E-10 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Afer_0605 cb51a8263c128ff3b23f1fa7047f33cd 326 Pfam PF07885 Ion channel 25 94 6.8E-15 T 14-10-2018 IPR013099 Potassium channel domain Afer_0605 cb51a8263c128ff3b23f1fa7047f33cd 326 SUPERFAMILY SSF81324 15 133 1.44E-21 T 14-10-2018 Afer_1475 d2f5f979de4300b8188168131ac7bd36 163 Gene3D G3DSA:3.40.50.7700 1 156 4.9E-65 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Afer_1475 d2f5f979de4300b8188168131ac7bd36 163 SMART SM01001 3 152 1.2E-88 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Afer_1475 d2f5f979de4300b8188168131ac7bd36 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 156 30.939 T 14-10-2018 IPR033747 Class I PurE Afer_1475 d2f5f979de4300b8188168131ac7bd36 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 151 8.8E-62 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Afer_1475 d2f5f979de4300b8188168131ac7bd36 163 Pfam PF00731 AIR carboxylase 5 149 1.4E-62 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Afer_1475 d2f5f979de4300b8188168131ac7bd36 163 PIRSF PIRSF001338 1 155 1.4E-63 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 Afer_1475 d2f5f979de4300b8188168131ac7bd36 163 SUPERFAMILY SSF52255 4 151 3.27E-60 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Afer_1864 f5485ce376d852be4fc7583fa38403db 270 PIRSF PIRSF003073 2 243 7.8E-74 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein Afer_1864 f5485ce376d852be4fc7583fa38403db 270 SUPERFAMILY SSF52540 70 229 3.06E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1864 f5485ce376d852be4fc7583fa38403db 270 Gene3D G3DSA:3.40.50.300 62 242 2.1E-43 T 14-10-2018 Afer_1864 f5485ce376d852be4fc7583fa38403db 270 Pfam PF01695 IstB-like ATP binding protein 52 224 1.3E-56 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 Afer_1864 f5485ce376d852be4fc7583fa38403db 270 SMART SM00382 97 225 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1044 bc1f2c6dec2effed14f310cb3d79c78d 331 SUPERFAMILY SSF52540 22 238 1.81E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1044 bc1f2c6dec2effed14f310cb3d79c78d 331 Pfam PF00005 ABC transporter 40 182 2.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1044 bc1f2c6dec2effed14f310cb3d79c78d 331 SMART SM00382 48 229 3.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1044 bc1f2c6dec2effed14f310cb3d79c78d 331 Gene3D G3DSA:3.40.50.300 12 248 1.1E-66 T 14-10-2018 Afer_0325 f015f6af1a82cf4881db4293ed04b51e 477 ProSitePatterns PS00216 Sugar transport proteins signature 1. 76 93 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Afer_0325 f015f6af1a82cf4881db4293ed04b51e 477 Pfam PF00083 Sugar (and other) transporter 24 450 9.7E-50 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Afer_0325 f015f6af1a82cf4881db4293ed04b51e 477 SUPERFAMILY SSF103473 6 449 1.14E-76 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_0325 f015f6af1a82cf4881db4293ed04b51e 477 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Afer_1379 7853598a522eabfda0bbae34390de921 438 Pfam PF07690 Major Facilitator Superfamily 20 362 6.1E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1379 7853598a522eabfda0bbae34390de921 438 SUPERFAMILY SSF103473 5 412 6.67E-44 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1379 7853598a522eabfda0bbae34390de921 438 Gene3D G3DSA:1.20.1250.20 231 420 1.8E-16 T 14-10-2018 Afer_1379 7853598a522eabfda0bbae34390de921 438 Gene3D G3DSA:1.20.1250.20 10 214 4.5E-16 T 14-10-2018 Afer_1783 c51b305ee41ba9467f6be56ddcf8470a 227 Pfam PF01738 Dienelactone hydrolase family 16 224 9.8E-55 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Afer_1783 c51b305ee41ba9467f6be56ddcf8470a 227 Gene3D G3DSA:3.40.50.1820 1 226 8.7E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1783 c51b305ee41ba9467f6be56ddcf8470a 227 SUPERFAMILY SSF53474 2 226 2.22E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 166 172 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 8 176 3.6E-48 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 7 454 4.9E-136 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 PIRSF PIRSF000110 1 458 9.0E-144 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 178 453 3.7E-86 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 156 184 2.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 303 329 2.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 226 242 2.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 132 145 2.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 208 225 2.0E-45 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 SUPERFAMILY SSF55347 166 457 1.8E-87 T 14-10-2018 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 SUPERFAMILY SSF51735 4 179 4.33E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 Gene3D G3DSA:3.40.50.720 7 412 3.5E-151 T 14-10-2018 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 Gene3D G3DSA:3.30.360.10 166 447 3.5E-151 T 14-10-2018 Afer_0496 a5d064d9068b21496ddc21fedd96ae9a 458 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 4 458 68.249 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 Afer_1746 b198aeab02695bbeb93f40b88eeb5927 383 Pfam PF00534 Glycosyl transferases group 1 208 349 5.7E-9 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_1746 b198aeab02695bbeb93f40b88eeb5927 383 Gene3D G3DSA:3.40.50.2000 1 163 1.0E-5 T 14-10-2018 Afer_1746 b198aeab02695bbeb93f40b88eeb5927 383 SUPERFAMILY SSF53756 2 372 7.33E-31 T 14-10-2018 Afer_1746 b198aeab02695bbeb93f40b88eeb5927 383 Gene3D G3DSA:3.40.50.2000 182 356 2.2E-17 T 14-10-2018 Afer_1234 f504b7788d82e18a651fca85a682e05a 318 Gene3D G3DSA:2.60.120.10 31 293 2.1E-86 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Afer_1234 f504b7788d82e18a651fca85a682e05a 318 Pfam PF02678 Pirin 37 140 2.0E-31 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 Afer_1234 f504b7788d82e18a651fca85a682e05a 318 SUPERFAMILY SSF51182 19 304 2.61E-79 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Afer_1234 f504b7788d82e18a651fca85a682e05a 318 Gene3D G3DSA:2.60.120.10 162 267 2.1E-86 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Afer_1234 f504b7788d82e18a651fca85a682e05a 318 Pfam PF05726 Pirin C-terminal cupin domain 196 297 6.6E-30 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 Afer_1234 f504b7788d82e18a651fca85a682e05a 318 PIRSF PIRSF006232 17 306 7.2E-86 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 Gene3D G3DSA:3.40.50.300 3 220 1.0E-72 T 14-10-2018 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 SUPERFAMILY SSF57774 131 166 1.79E-7 T 14-10-2018 IPR036193 Adenylate kinase, active site lid domain superfamily GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 TIGRFAM TIGR01351 adk: adenylate kinase 8 215 8.5E-69 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 Pfam PF05191 Adenylate kinase, active site lid 131 165 9.7E-12 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 PRINTS PR00094 Adenylate kinase signature 9 22 5.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 PRINTS PR00094 Adenylate kinase signature 87 103 5.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 PRINTS PR00094 Adenylate kinase signature 180 194 5.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 PRINTS PR00094 Adenylate kinase signature 37 51 5.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 PRINTS PR00094 Adenylate kinase signature 163 178 5.1E-33 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 ProSitePatterns PS00113 Adenylate kinase signature. 87 98 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 SUPERFAMILY SSF52540 5 217 3.71E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 Pfam PF00406 Adenylate kinase 10 192 5.0E-49 T 14-10-2018 Afer_0419 c103ef56f6f2569a898fe687f6f68ff0 225 Hamap MF_00235 Adenylate kinase [adk]. 6 216 44.048 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 Afer_0119 e1a6b7abb512e5c7a465f2271599b760 473 ProSitePatterns PS00157 Ribulose bisphosphate carboxylase large chain active site. 189 197 - T 14-10-2018 IPR020878 Ribulose bisphosphate carboxylase, large chain, active site GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0119 e1a6b7abb512e5c7a465f2271599b760 473 SUPERFAMILY SSF54966 3 141 5.1E-55 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0119 e1a6b7abb512e5c7a465f2271599b760 473 Gene3D G3DSA:3.30.70.150 15 141 1.0E-47 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0119 e1a6b7abb512e5c7a465f2271599b760 473 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 17 136 8.3E-43 T 14-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0119 e1a6b7abb512e5c7a465f2271599b760 473 Hamap MF_01338 Ribulose bisphosphate carboxylase large chain [rbcL]. 2 468 60.49 T 14-10-2018 IPR020888 Ribulose bisphosphate carboxylase large subunit, type I GO:0000287|GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0119 e1a6b7abb512e5c7a465f2271599b760 473 SUPERFAMILY SSF51649 142 466 3.27E-145 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0119 e1a6b7abb512e5c7a465f2271599b760 473 Gene3D G3DSA:3.20.20.110 143 473 1.6E-155 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0119 e1a6b7abb512e5c7a465f2271599b760 473 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 147 455 5.6E-130 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 574 663 6.0E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 307 5.6E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 SUPERFAMILY SSF52540 346 595 4.79E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 Pfam PF00005 ABC transporter 375 524 2.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 SMART SM00382 32 231 6.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 SMART SM00382 383 574 3.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 298 1.3E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 576 643 2.6E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 Gene3D G3DSA:3.40.50.300 344 673 3.1E-99 T 14-10-2018 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 Gene3D G3DSA:3.40.50.300 1 323 8.5E-95 T 14-10-2018 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 Pfam PF00005 ABC transporter 24 181 5.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1147 099ce1c16abf38e3df1d19e7a21290c0 676 SUPERFAMILY SSF52540 3 252 1.03E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 Gene3D G3DSA:1.20.58.760 528 728 1.9E-38 T 14-10-2018 Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 ProSitePatterns PS00674 AAA-protein family signature. 421 439 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 Gene3D G3DSA:1.10.8.60 453 526 1.6E-11 T 14-10-2018 Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 SUPERFAMILY SSF52540 194 520 1.59E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 234 310 1.5E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 383 450 1.0E-4 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 SUPERFAMILY SSF140990 535 727 1.7E-32 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 Pfam PF01434 Peptidase family M41 534 719 2.7E-23 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Afer_1844 b442bdc9e3a7bd06ed9b8280d41a011f 800 SMART SM00382 230 453 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 Pfam PF01645 Conserved region in glutamate synthase 805 1172 2.9E-148 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 SUPERFAMILY SSF69336 1225 1482 1.31E-84 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 SUPERFAMILY SSF56235 22 429 1.89E-129 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 Gene3D G3DSA:3.20.20.70 791 1218 7.1E-183 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 Gene3D G3DSA:3.60.20.10 22 437 2.2E-156 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 Gene3D G3DSA:2.160.20.60 1223 1491 2.9E-101 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 SUPERFAMILY SSF51395 447 1199 1.47E-254 T 14-10-2018 Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 Pfam PF01493 GXGXG motif 1250 1436 7.4E-79 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 Gene3D G3DSA:3.20.20.70 438 790 4.4E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 Pfam PF04898 Glutamate synthase central domain 454 740 8.1E-108 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 Afer_1988 41bb496756c217f1c29f589015c0ff55 1497 Pfam PF00310 Glutamine amidotransferases class-II 22 427 1.7E-153 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain Afer_0295 92126973f93e352a0e0601e344173572 729 Gene3D G3DSA:1.10.420.10 581 704 2.2E-124 T 14-10-2018 Afer_0295 92126973f93e352a0e0601e344173572 729 SUPERFAMILY SSF48113 423 728 9.43E-98 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 SUPERFAMILY SSF48113 21 423 1.06E-142 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 Gene3D G3DSA:1.10.520.10 426 728 2.2E-124 T 14-10-2018 Afer_0295 92126973f93e352a0e0601e344173572 729 Pfam PF00141 Peroxidase 82 387 1.0E-45 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 Pfam PF00141 Peroxidase 396 703 2.3E-35 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 Gene3D G3DSA:1.10.420.20 187 390 1.2E-199 T 14-10-2018 Afer_0295 92126973f93e352a0e0601e344173572 729 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 250 260 - T 14-10-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 Afer_0295 92126973f93e352a0e0601e344173572 729 ProSitePatterns PS00436 Peroxidases active site signature. 86 97 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 Gene3D G3DSA:1.10.520.10 20 423 1.2E-199 T 14-10-2018 Afer_0295 92126973f93e352a0e0601e344173572 729 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 9 728 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Afer_0295 92126973f93e352a0e0601e344173572 729 Hamap MF_01961 Catalase-peroxidase [katG]. 5 729 39.351 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 48 61 5.1E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 473 499 5.1E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 63 88 5.1E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 22 44 5.1E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 258 281 5.1E-44 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00458 Haem peroxidase superfamily signature 309 324 5.4E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00458 Haem peroxidase superfamily signature 250 265 5.4E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00458 Haem peroxidase superfamily signature 86 100 5.4E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00458 Haem peroxidase superfamily signature 164 176 5.4E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_0295 92126973f93e352a0e0601e344173572 729 PRINTS PR00458 Haem peroxidase superfamily signature 146 163 5.4E-19 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 Afer_1359 6eaed8e62fec37be753801dd1a3efc0d 167 SUPERFAMILY SSF55729 12 161 5.85E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_1359 6eaed8e62fec37be753801dd1a3efc0d 167 Gene3D G3DSA:3.40.630.30 4 160 1.6E-31 T 14-10-2018 Afer_1359 6eaed8e62fec37be753801dd1a3efc0d 167 Pfam PF13673 Acetyltransferase (GNAT) domain 73 156 2.5E-10 T 14-10-2018 IPR000182 GNAT domain Afer_1939 fffab98b5bd19c89c6e8404be2f79f89 418 Gene3D G3DSA:3.90.25.10 210 369 1.4E-149 T 14-10-2018 Afer_1939 fffab98b5bd19c89c6e8404be2f79f89 418 Gene3D G3DSA:3.40.50.720 2 294 1.4E-149 T 14-10-2018 Afer_1939 fffab98b5bd19c89c6e8404be2f79f89 418 SUPERFAMILY SSF51735 1 369 5.04E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1939 fffab98b5bd19c89c6e8404be2f79f89 418 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 292 1.4E-21 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Afer_0954 27043df54fb69d57c8ee2de116256fc6 278 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 6 277 29.664 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Afer_0954 27043df54fb69d57c8ee2de116256fc6 278 Gene3D G3DSA:3.40.50.720 106 241 1.2E-73 T 14-10-2018 Afer_0954 27043df54fb69d57c8ee2de116256fc6 278 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 11 93 1.9E-24 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Afer_0954 27043df54fb69d57c8ee2de116256fc6 278 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 272 2.1E-61 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 Afer_0954 27043df54fb69d57c8ee2de116256fc6 278 SUPERFAMILY SSF53223 8 104 1.04E-27 T 14-10-2018 Afer_0954 27043df54fb69d57c8ee2de116256fc6 278 SUPERFAMILY SSF51735 107 273 4.39E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0954 27043df54fb69d57c8ee2de116256fc6 278 Gene3D G3DSA:3.40.50.10860 10 262 1.2E-73 T 14-10-2018 Afer_0954 27043df54fb69d57c8ee2de116256fc6 278 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 125 190 6.2E-7 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Afer_0124 aebe1c19437a99c5de2cc9dea2cad906 103 SMART SM00877 8 85 3.8E-29 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Afer_0124 aebe1c19437a99c5de2cc9dea2cad906 103 SUPERFAMILY SSF143414 9 94 4.97E-27 T 14-10-2018 IPR037233 CcmK-like superfamily Afer_0124 aebe1c19437a99c5de2cc9dea2cad906 103 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 26 45 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Afer_0124 aebe1c19437a99c5de2cc9dea2cad906 103 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 9 70 2.0E-19 T 14-10-2018 Afer_0124 aebe1c19437a99c5de2cc9dea2cad906 103 Pfam PF00936 BMC domain 9 84 1.8E-24 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Afer_0124 aebe1c19437a99c5de2cc9dea2cad906 103 Gene3D G3DSA:3.30.70.1710 2 102 8.0E-35 T 14-10-2018 Afer_0081 2ae913b0561ab3cd8d55ed0cc52332ff 696 SUPERFAMILY SSF54897 50 202 6.46E-17 T 14-10-2018 Afer_0081 2ae913b0561ab3cd8d55ed0cc52332ff 696 SMART SM00944 51 195 1.4E-15 T 14-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 Afer_0081 2ae913b0561ab3cd8d55ed0cc52332ff 696 Pfam PF09286 Pro-kumamolisin, activation domain 57 194 2.9E-8 T 14-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 Afer_0081 2ae913b0561ab3cd8d55ed0cc52332ff 696 SUPERFAMILY SSF52743 229 682 1.2E-31 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Afer_1694 00e773f414b7f92ede770ac6b5d25ce4 94 SMART SM01409 15 78 2.0E-12 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Afer_1694 00e773f414b7f92ede770ac6b5d25ce4 94 Gene3D G3DSA:3.90.940.10 8 94 3.1E-20 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Afer_1694 00e773f414b7f92ede770ac6b5d25ce4 94 Pfam PF01192 RNA polymerase Rpb6 15 76 2.0E-11 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Afer_1694 00e773f414b7f92ede770ac6b5d25ce4 94 SUPERFAMILY SSF63562 8 88 9.42E-18 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 Afer_1694 00e773f414b7f92ede770ac6b5d25ce4 94 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 9 76 1.7E-15 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_1694 00e773f414b7f92ede770ac6b5d25ce4 94 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 8 79 14.147 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Pfam PF14492 Elongation Factor G, domain II 404 478 5.6E-34 T 14-10-2018 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 53 68 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Pfam PF00009 Elongation factor Tu GTP binding domain 11 282 4.8E-72 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Pfam PF03764 Elongation factor G, domain IV 479 599 8.9E-48 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 SUPERFAMILY SSF50447 265 404 1.79E-37 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 SMART SM00889 480 599 3.7E-72 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 PRINTS PR00315 GTP-binding elongation factor signature 80 90 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 PRINTS PR00315 GTP-binding elongation factor signature 60 68 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 PRINTS PR00315 GTP-binding elongation factor signature 96 107 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 PRINTS PR00315 GTP-binding elongation factor signature 132 141 1.8E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Gene3D G3DSA:3.30.70.870 406 483 5.7E-33 T 14-10-2018 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Gene3D G3DSA:2.40.30.10 295 405 1.4E-44 T 14-10-2018 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 SUPERFAMILY SSF52540 8 282 1.52E-110 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Hamap MF_00054_B Elongation factor G [fusA]. 8 692 112.403 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Gene3D G3DSA:3.30.70.240 605 675 3.7E-89 T 14-10-2018 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 SMART SM00838 601 688 2.5E-56 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 SUPERFAMILY SSF54980 604 691 1.92E-29 T 14-10-2018 IPR035647 EF-G domain III/V-like Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Pfam PF03144 Elongation factor Tu domain 2 324 391 1.6E-17 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 SUPERFAMILY SSF54211 479 600 4.3E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Pfam PF00679 Elongation factor G C-terminus 602 687 1.5E-30 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 4 693 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 SUPERFAMILY SSF54980 404 481 4.68E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 181 6.6E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Gene3D G3DSA:3.40.50.300 4 294 7.8E-116 T 14-10-2018 Afer_0395 73b2bbbf3bc383a939c4dbae429134b3 695 Gene3D G3DSA:3.30.230.10 484 688 3.7E-89 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_1260 425e88673c65f8ca48348cc27426aaae 294 SUPERFAMILY SSF88659 192 281 2.24E-23 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_1260 425e88673c65f8ca48348cc27426aaae 294 SUPERFAMILY SSF88659 133 206 4.58E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_1260 425e88673c65f8ca48348cc27426aaae 294 Gene3D G3DSA:1.10.10.10 209 294 6.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1260 425e88673c65f8ca48348cc27426aaae 294 PRINTS PR00046 Major sigma-70 factor signature 84 97 1.4E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 PRINTS PR00046 Major sigma-70 factor signature 253 268 1.4E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 PRINTS PR00046 Major sigma-70 factor signature 108 116 1.4E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 PRINTS PR00046 Major sigma-70 factor signature 232 244 1.4E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 PRINTS PR00046 Major sigma-70 factor signature 268 279 1.4E-24 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 Pfam PF04545 Sigma-70, region 4 228 281 3.9E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 Gene3D G3DSA:1.20.120.1810 26 129 5.8E-36 T 14-10-2018 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 Pfam PF04539 Sigma-70 region 3 143 210 5.0E-15 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 Pfam PF04542 Sigma-70 region 2 60 129 5.8E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 Gene3D G3DSA:1.10.10.10 133 208 1.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1260 425e88673c65f8ca48348cc27426aaae 294 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 56 281 4.1E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_1260 425e88673c65f8ca48348cc27426aaae 294 SUPERFAMILY SSF88946 49 125 1.79E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0816 99e3a6fab2cde9555911345258a420ed 1175 Pfam PF02514 CobN/Magnesium Chelatase 106 1159 0.0 T 14-10-2018 IPR003672 CobN/magnesium chelatase GO:0009058 Afer_0816 99e3a6fab2cde9555911345258a420ed 1175 TIGRFAM TIGR02257 cobalto_cobN: cobaltochelatase, CobN subunit 45 1170 0.0 T 14-10-2018 IPR011953 Cobaltochelatase, CobN subunit GO:0009236|GO:0051116 Afer_1335 13a7866866a3bab6bd6bf09f045cac41 205 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 2.4E-71 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Afer_1335 13a7866866a3bab6bd6bf09f045cac41 205 Gene3D G3DSA:1.10.3130.10 1 66 1.3E-22 T 14-10-2018 Afer_1335 13a7866866a3bab6bd6bf09f045cac41 205 PIRSF PIRSF000441 1 198 3.5E-77 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 Afer_1335 13a7866866a3bab6bd6bf09f045cac41 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 150 7.8E-8 T 14-10-2018 IPR001451 Hexapeptide repeat Afer_1335 13a7866866a3bab6bd6bf09f045cac41 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 108 2.8E-4 T 14-10-2018 IPR001451 Hexapeptide repeat Afer_1335 13a7866866a3bab6bd6bf09f045cac41 205 SUPERFAMILY SSF51161 5 169 1.33E-53 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Afer_1335 13a7866866a3bab6bd6bf09f045cac41 205 Gene3D G3DSA:2.160.10.10 67 180 4.0E-36 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Gene3D G3DSA:3.40.228.10 352 425 4.1E-11 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Pfam PF00384 Molybdopterin oxidoreductase 292 405 2.1E-6 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 84 1.5E-18 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 154 164 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 SUPERFAMILY SSF54292 7 82 4.42E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Gene3D G3DSA:2.20.25.90 224 278 3.7E-13 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 92 130 4.4E-15 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 37 54 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Gene3D G3DSA:3.10.20.740 7 131 8.5E-36 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 SUPERFAMILY SSF53706 222 637 9.18E-58 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 SMART SM00929 91 131 6.2E-18 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 10 618 1.5E-141 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 SUPERFAMILY SSF54862 84 220 1.63E-35 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 106 118 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Gene3D G3DSA:3.40.50.740 292 351 4.1E-11 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Gene3D G3DSA:3.40.50.740 438 644 1.1E-12 T 14-10-2018 Afer_0369 0d29906f743b7530e20ba61da808d499 833 SMART SM00926 224 278 2.8E-8 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 227 278 7.7E-9 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0369 0d29906f743b7530e20ba61da808d499 833 Gene3D G3DSA:3.30.70.20 140 213 1.6E-8 T 14-10-2018 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 SUPERFAMILY SSF51419 11 236 4.19E-57 T 14-10-2018 IPR029066 PLP-binding barrel Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 Hamap MF_01201 Alanine racemase. 4 359 29.071 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 Pfam PF01168 Alanine racemase, N-terminal domain 11 224 2.3E-57 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 Gene3D G3DSA:2.40.37.10 11 357 3.5E-100 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 SUPERFAMILY SSF50621 220 359 4.88E-36 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 Gene3D G3DSA:3.20.20.10 13 227 3.5E-100 T 14-10-2018 IPR029066 PLP-binding barrel Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 SMART SM01005 235 359 1.6E-37 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 Pfam PF00842 Alanine racemase, C-terminal domain 235 357 5.4E-33 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 TIGRFAM TIGR00492 alr: alanine racemase 6 357 1.2E-80 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 PRINTS PR00992 Alanine racemase signature 29 45 7.4E-45 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 PRINTS PR00992 Alanine racemase signature 125 137 7.4E-45 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 PRINTS PR00992 Alanine racemase signature 341 354 7.4E-45 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 PRINTS PR00992 Alanine racemase signature 64 82 7.4E-45 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 PRINTS PR00992 Alanine racemase signature 197 224 7.4E-45 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 PRINTS PR00992 Alanine racemase signature 251 266 7.4E-45 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 PRINTS PR00992 Alanine racemase signature 268 283 7.4E-45 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0437 69a2ca538deb27c82f12fe50a45a3d7e 363 PRINTS PR00992 Alanine racemase signature 158 169 7.4E-45 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 Gene3D G3DSA:3.40.1190.20 192 471 1.9E-60 T 14-10-2018 IPR029056 Ribokinase-like Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 PIRSF PIRSF017184 80 468 1.7E-66 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 PIRSF PIRSF017184 3 86 6.4E-8 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 Pfam PF03853 YjeF-related protein N-terminus 27 80 1.1E-8 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 Pfam PF03853 YjeF-related protein N-terminus 95 164 9.8E-11 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 Gene3D G3DSA:3.40.50.10260 4 188 1.7E-26 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 195 467 20.138 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 Pfam PF01256 Carbohydrate kinase 218 456 2.7E-50 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 406 416 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 201 460 7.2E-51 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 SUPERFAMILY SSF64153 4 216 3.4E-33 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 Afer_0436 64426b88e9f4daacd380c5f1b1f35d16 480 SUPERFAMILY SSF53613 193 461 1.8E-47 T 14-10-2018 IPR029056 Ribokinase-like Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 Gene3D G3DSA:1.20.1440.230 329 430 1.4E-24 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 Gene3D G3DSA:3.10.20.600 230 326 2.2E-26 T 14-10-2018 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 164 179 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 SMART SM00928 330 375 3.4E-21 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 SUPERFAMILY SSF142984 239 325 1.11E-15 T 14-10-2018 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 SUPERFAMILY SSF140490 327 431 2.48E-27 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 SUPERFAMILY SSF142019 4 238 1.31E-75 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 Gene3D G3DSA:3.40.50.11540 52 229 5.4E-73 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 332 423 8.7E-26 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 343 354 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0368 9ed7131a26735ee1ab618a7ffe7a53ac 432 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 48 217 6.0E-45 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_1674 abecfb8973cddc824e3b391f7411c16f 366 SUPERFAMILY SSF46589 31 92 3.5E-9 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Afer_1674 abecfb8973cddc824e3b391f7411c16f 366 Pfam PF01409 tRNA synthetases class II core domain (F) 123 359 1.0E-86 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 Afer_1674 abecfb8973cddc824e3b391f7411c16f 366 Gene3D G3DSA:3.30.930.10 25 362 1.7E-93 T 14-10-2018 Afer_1674 abecfb8973cddc824e3b391f7411c16f 366 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 37 103 7.8E-14 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 Afer_1674 abecfb8973cddc824e3b391f7411c16f 366 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 25 362 39.641 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 Afer_1674 abecfb8973cddc824e3b391f7411c16f 366 SUPERFAMILY SSF55681 123 358 3.65E-64 T 14-10-2018 Afer_1674 abecfb8973cddc824e3b391f7411c16f 366 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 60 361 1.4E-78 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 Afer_1920 459294680e08b5d1d63f07a9bb3bb821 194 ProSitePatterns PS01331 Thymidylate kinase signature. 85 97 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Afer_1920 459294680e08b5d1d63f07a9bb3bb821 194 SUPERFAMILY SSF52540 1 178 4.07E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1920 459294680e08b5d1d63f07a9bb3bb821 194 Gene3D G3DSA:3.40.50.300 1 186 4.4E-39 T 14-10-2018 Afer_1920 459294680e08b5d1d63f07a9bb3bb821 194 Pfam PF02223 Thymidylate kinase 3 175 1.4E-24 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 Afer_1920 459294680e08b5d1d63f07a9bb3bb821 194 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 157 2.0E-24 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Afer_1920 459294680e08b5d1d63f07a9bb3bb821 194 Hamap MF_00165 Thymidylate kinase [tmk]. 1 186 16.953 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 Afer_1918 c6c2ca62b1b1d6dfa59c91a3e6c49c2c 191 SUPERFAMILY SSF88659 112 174 4.36E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_1918 c6c2ca62b1b1d6dfa59c91a3e6c49c2c 191 Pfam PF08281 Sigma-70, region 4 121 171 2.5E-16 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Afer_1918 c6c2ca62b1b1d6dfa59c91a3e6c49c2c 191 Gene3D G3DSA:1.10.10.10 114 177 1.0E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1918 c6c2ca62b1b1d6dfa59c91a3e6c49c2c 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 32 63 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Afer_1918 c6c2ca62b1b1d6dfa59c91a3e6c49c2c 191 Gene3D G3DSA:1.10.1740.10 1 80 1.4E-33 T 14-10-2018 Afer_1918 c6c2ca62b1b1d6dfa59c91a3e6c49c2c 191 SUPERFAMILY SSF88946 3 89 2.67E-27 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1918 c6c2ca62b1b1d6dfa59c91a3e6c49c2c 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 175 2.1E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_1918 c6c2ca62b1b1d6dfa59c91a3e6c49c2c 191 Pfam PF04542 Sigma-70 region 2 13 78 1.2E-19 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1500 8cf82ee0eb45aafad8ef9dbe736c1304 124 SUPERFAMILY SSF54814 41 86 4.77E-6 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Afer_1500 8cf82ee0eb45aafad8ef9dbe736c1304 124 Pfam PF13083 KH domain 41 99 7.0E-12 T 14-10-2018 Afer_1731 ec3c1a5db4809bd44ce953f86f1e9376 378 Gene3D G3DSA:3.20.20.450 20 259 3.6E-46 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1731 ec3c1a5db4809bd44ce953f86f1e9376 378 Pfam PF00563 EAL domain 35 246 5.0E-37 T 14-10-2018 IPR001633 EAL domain Afer_1731 ec3c1a5db4809bd44ce953f86f1e9376 378 SMART SM00052 15 251 2.3E-17 T 14-10-2018 IPR001633 EAL domain Afer_1731 ec3c1a5db4809bd44ce953f86f1e9376 378 SUPERFAMILY SSF141868 36 255 2.62E-49 T 14-10-2018 IPR035919 EAL domain superfamily Afer_0873 b475523ff198837a54ced020a6febd87 282 SMART SM00331 27 260 3.1E-14 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_0873 b475523ff198837a54ced020a6febd87 282 SUPERFAMILY SSF81606 24 259 8.37E-54 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_0873 b475523ff198837a54ced020a6febd87 282 Gene3D G3DSA:3.60.40.10 8 259 5.3E-56 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_0873 b475523ff198837a54ced020a6febd87 282 SMART SM00332 18 258 5.3E-21 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 Afer_0873 b475523ff198837a54ced020a6febd87 282 Pfam PF13672 Protein phosphatase 2C 36 212 4.6E-15 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 2.0E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 Gene3D G3DSA:3.30.390.30 338 458 3.2E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 171 196 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 400 415 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 422 442 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 256 270 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.9E-64 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 Gene3D G3DSA:3.50.50.60 144 262 3.4E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 Gene3D G3DSA:3.50.50.60 6 324 3.4E-98 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 SUPERFAMILY SSF51905 4 330 1.11E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 446 9.5E-32 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 SUPERFAMILY SSF55424 336 457 2.23E-37 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PIRSF PIRSF000350 1 453 1.8E-73 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 255 271 7.1E-37 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 284 306 7.1E-37 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 171 189 7.1E-37 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 7.1E-37 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 7.1E-37 T 14-10-2018 Afer_0717 76f3530b12125d1afaecafe83e7bddf6 459 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 458 1.6E-140 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 Afer_0511 cc6cd6529da3a174dd876a43ec8ce14c 521 SUPERFAMILY SSF55890 322 355 1.09E-7 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 Afer_0511 cc6cd6529da3a174dd876a43ec8ce14c 521 SMART SM00387 410 519 3.2E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0511 cc6cd6529da3a174dd876a43ec8ce14c 521 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 414 493 1.1E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0511 cc6cd6529da3a174dd876a43ec8ce14c 521 SUPERFAMILY SSF55874 379 503 9.3E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0511 cc6cd6529da3a174dd876a43ec8ce14c 521 Gene3D G3DSA:3.30.565.10 368 495 3.7E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0511 cc6cd6529da3a174dd876a43ec8ce14c 521 Gene3D G3DSA:3.30.450.20 195 307 3.6E-14 T 14-10-2018 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 Gene3D G3DSA:3.40.50.300 85 354 7.6E-104 T 14-10-2018 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 8 470 1.5E-234 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 11 82 4.8E-16 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 SUPERFAMILY SSF50615 7 82 3.66E-20 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 SMART SM00382 151 355 3.0E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 Gene3D G3DSA:2.40.10.170 7 84 1.9E-22 T 14-10-2018 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 SUPERFAMILY SSF47917 355 470 6.8E-52 T 14-10-2018 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 Gene3D G3DSA:1.10.1140.10 355 471 1.2E-54 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 Hamap MF_01347 ATP synthase subunit beta [atpB]. 6 470 54.234 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 343 352 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 SUPERFAMILY SSF52540 86 357 8.38E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1795 296a46c29b8cc0b0f8ecee98c5899546 471 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 139 352 2.3E-61 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1684 a76081b0b30fdd9e67f957ee3a77c647 196 Gene3D G3DSA:2.40.30.20 1 84 5.6E-19 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1684 a76081b0b30fdd9e67f957ee3a77c647 196 Gene3D G3DSA:2.40.30.20 97 194 3.3E-24 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_1684 a76081b0b30fdd9e67f957ee3a77c647 196 Pfam PF00677 Lumazine binding domain 4 81 2.6E-16 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1684 a76081b0b30fdd9e67f957ee3a77c647 196 Pfam PF00677 Lumazine binding domain 96 175 3.8E-17 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_1684 a76081b0b30fdd9e67f957ee3a77c647 196 SUPERFAMILY SSF63380 89 187 1.02E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Afer_1684 a76081b0b30fdd9e67f957ee3a77c647 196 SUPERFAMILY SSF63380 2 85 2.81E-17 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Afer_1684 a76081b0b30fdd9e67f957ee3a77c647 196 PIRSF PIRSF000498 1 195 2.0E-48 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 SMART SM00306 385 483 4.6E-4 T 14-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 SMART SM00305 485 530 1.2E-5 T 14-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 Pfam PF00772 DnaB-like helicase N terminal domain 12 113 4.3E-26 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 Pfam PF03796 DnaB-like helicase C terminal domain 189 580 8.3E-105 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 Gene3D G3DSA:3.40.50.300 523 583 5.2E-17 T 14-10-2018 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 SMART SM00382 204 383 4.4E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 11 581 4.1E-159 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 Gene3D G3DSA:3.40.50.300 166 393 7.5E-80 T 14-10-2018 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 SUPERFAMILY SSF48024 10 121 6.54E-29 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 Gene3D G3DSA:2.170.16.10 394 522 6.9E-25 T 14-10-2018 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 SUPERFAMILY SSF51294 386 524 2.88E-25 T 14-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 Gene3D G3DSA:1.10.860.10 5 165 8.9E-46 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 SUPERFAMILY SSF52540 189 396 1.21E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0041 8c4db8346cade0b138d9d74c46b504e8 585 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 504 525 3.3E-8 T 14-10-2018 IPR030934 Intein C-terminal splicing region Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 SUPERFAMILY SSF56059 3 382 2.12E-126 T 14-10-2018 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Gene3D G3DSA:1.20.80.30 112 197 2.8E-92 T 14-10-2018 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Gene3D G3DSA:3.50.30.10 386 503 1.8E-64 T 14-10-2018 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 SUPERFAMILY SSF51621 522 865 1.13E-108 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 SUPERFAMILY SSF52009 390 509 9.16E-32 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 757 775 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Pfam PF00391 PEP-utilising enzyme, mobile domain 422 501 6.2E-24 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 PIRSF PIRSF000853 2 876 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 533 866 1.6E-84 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 20 58 1.3E-10 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 304 352 7.4E-8 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 63 288 1.3E-31 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Gene3D G3DSA:1.10.189.10 346 526 1.8E-64 T 14-10-2018 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 866 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Gene3D G3DSA:3.30.1490.20 16 244 2.8E-92 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Gene3D G3DSA:3.20.20.60 533 868 1.7E-134 T 14-10-2018 Afer_1262 e0f8174acae43dbf3c4ae6715fa68a8e 877 Gene3D G3DSA:3.30.470.20 245 342 3.7E-39 T 14-10-2018 Afer_1879 223272415eeb13332cbb95f82f2d08e6 316 Pfam PF00005 ABC transporter 22 164 7.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1879 223272415eeb13332cbb95f82f2d08e6 316 Pfam PF13732 Domain of unknown function (DUF4162) 218 305 3.2E-6 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 Afer_1879 223272415eeb13332cbb95f82f2d08e6 316 SMART SM00382 30 215 3.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1879 223272415eeb13332cbb95f82f2d08e6 316 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 13 306 3.5E-100 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 Afer_1879 223272415eeb13332cbb95f82f2d08e6 316 Gene3D G3DSA:3.40.50.300 2 236 9.3E-67 T 14-10-2018 Afer_1879 223272415eeb13332cbb95f82f2d08e6 316 SUPERFAMILY SSF52540 5 227 6.5E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1879 223272415eeb13332cbb95f82f2d08e6 316 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0106 fb17072da9845eb2e393606484c96c53 398 Gene3D G3DSA:3.40.47.10 5 277 2.9E-137 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0106 fb17072da9845eb2e393606484c96c53 398 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Afer_0106 fb17072da9845eb2e393606484c96c53 398 SUPERFAMILY SSF53901 271 392 3.79E-37 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0106 fb17072da9845eb2e393606484c96c53 398 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Afer_0106 fb17072da9845eb2e393606484c96c53 398 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Afer_0106 fb17072da9845eb2e393606484c96c53 398 Gene3D G3DSA:3.40.47.10 126 391 2.9E-137 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0106 fb17072da9845eb2e393606484c96c53 398 PIRSF PIRSF000429 1 395 3.3E-115 T 14-10-2018 IPR002155 Thiolase GO:0016747 Afer_0106 fb17072da9845eb2e393606484c96c53 398 SUPERFAMILY SSF53901 5 271 4.88E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0106 fb17072da9845eb2e393606484c96c53 398 Pfam PF00108 Thiolase, N-terminal domain 5 263 2.7E-92 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Afer_0106 fb17072da9845eb2e393606484c96c53 398 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 7.4E-130 T 14-10-2018 IPR002155 Thiolase GO:0016747 Afer_0106 fb17072da9845eb2e393606484c96c53 398 Pfam PF02803 Thiolase, C-terminal domain 272 392 2.4E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Afer_0714 08664e4d14b9e233ce966b53e2a20b83 148 Gene3D G3DSA:3.30.420.10 3 146 5.1E-50 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0714 08664e4d14b9e233ce966b53e2a20b83 148 SUPERFAMILY SSF53098 6 142 9.61E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0714 08664e4d14b9e233ce966b53e2a20b83 148 Pfam PF00075 RNase H 6 141 3.0E-36 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 Afer_0714 08664e4d14b9e233ce966b53e2a20b83 148 Hamap MF_00042 Ribonuclease H [rnhA]. 2 148 25.985 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 Afer_0720 c7689f6b02e462cbe17ecfecab6578cd 373 Pfam PF01321 Creatinase/Prolidase N-terminal domain 10 136 4.9E-15 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Afer_0720 c7689f6b02e462cbe17ecfecab6578cd 373 SUPERFAMILY SSF53092 5 136 5.75E-18 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Afer_0720 c7689f6b02e462cbe17ecfecab6578cd 373 Gene3D G3DSA:3.40.350.10 4 127 1.4E-27 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Afer_0720 c7689f6b02e462cbe17ecfecab6578cd 373 Gene3D G3DSA:3.90.230.10 136 371 7.8E-68 T 14-10-2018 Afer_0720 c7689f6b02e462cbe17ecfecab6578cd 373 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 300 312 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Afer_0720 c7689f6b02e462cbe17ecfecab6578cd 373 SUPERFAMILY SSF55920 139 366 9.03E-62 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Afer_0720 c7689f6b02e462cbe17ecfecab6578cd 373 Pfam PF00557 Metallopeptidase family M24 146 354 1.6E-50 T 14-10-2018 IPR000994 Peptidase M24 Afer_0854 48b825089084b75c0113f2235b319071 223 Gene3D G3DSA:1.10.3210.10 12 214 1.5E-29 T 14-10-2018 Afer_0854 48b825089084b75c0113f2235b319071 223 SUPERFAMILY SSF109604 14 206 6.28E-26 T 14-10-2018 Afer_0854 48b825089084b75c0113f2235b319071 223 Pfam PF08668 HDOD domain 14 186 3.2E-19 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD Afer_1579 4fcea6b43f0c88ed74d378d655cc394c 989 Gene3D G3DSA:3.40.50.300 638 766 1.2E-17 T 14-10-2018 Afer_1579 4fcea6b43f0c88ed74d378d655cc394c 989 SUPERFAMILY SSF52540 2 755 7.14E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1579 4fcea6b43f0c88ed74d378d655cc394c 989 Pfam PF13361 UvrD-like helicase C-terminal domain 662 751 1.1E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Afer_1579 4fcea6b43f0c88ed74d378d655cc394c 989 Gene3D G3DSA:3.40.50.300 1 146 2.6E-27 T 14-10-2018 Afer_1579 4fcea6b43f0c88ed74d378d655cc394c 989 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 390 3.2E-44 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Afer_1579 4fcea6b43f0c88ed74d378d655cc394c 989 Gene3D G3DSA:3.40.50.300 454 547 5.3E-10 T 14-10-2018 Afer_1579 4fcea6b43f0c88ed74d378d655cc394c 989 Gene3D G3DSA:3.40.50.300 287 417 9.0E-26 T 14-10-2018 Afer_1576 b1f423d6e97f6a77cce1dcba41adc7b0 230 SMART SM00862 150 225 2.0E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_1576 b1f423d6e97f6a77cce1dcba41adc7b0 230 SUPERFAMILY SSF52172 2 123 1.99E-35 T 14-10-2018 IPR011006 CheY-like superfamily Afer_1576 b1f423d6e97f6a77cce1dcba41adc7b0 230 Gene3D G3DSA:3.40.50.2300 1 125 1.9E-32 T 14-10-2018 Afer_1576 b1f423d6e97f6a77cce1dcba41adc7b0 230 Pfam PF00072 Response regulator receiver domain 4 112 3.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1576 b1f423d6e97f6a77cce1dcba41adc7b0 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 8.0E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_1576 b1f423d6e97f6a77cce1dcba41adc7b0 230 SMART SM00448 2 112 1.2E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1576 b1f423d6e97f6a77cce1dcba41adc7b0 230 Gene3D G3DSA:1.10.10.10 126 228 4.9E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1576 b1f423d6e97f6a77cce1dcba41adc7b0 230 SUPERFAMILY SSF46894 127 226 2.49E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 PIRSF PIRSF006641 1 357 9.3E-101 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 Gene3D G3DSA:3.10.20.30 47 355 4.2E-110 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 25 43 7.4E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 69 84 7.4E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 86 104 7.4E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 4 24 7.4E-24 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 357 7.4E-96 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 Gene3D G3DSA:1.10.150.300 112 195 4.2E-110 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 SUPERFAMILY SSF52540 3 294 1.94E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 Pfam PF06071 Protein of unknown function (DUF933) 275 356 2.8E-31 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 Gene3D G3DSA:3.40.50.300 3 272 4.2E-110 T 14-10-2018 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 SUPERFAMILY SSF81271 274 357 5.67E-28 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Afer_0532 b11df14d6954eca6ec348a7e7c7e03fa 357 Pfam PF01926 50S ribosome-binding GTPase 4 114 3.6E-17 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 45 60 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 6.3E-60 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PIRSF PIRSF000350 3 471 9.8E-139 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 1.7E-28 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 1.7E-28 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.7E-28 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 1.7E-28 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 1.7E-28 T 14-10-2018 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 SUPERFAMILY SSF55424 344 470 1.32E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 Gene3D G3DSA:3.50.50.60 12 331 3.2E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 2.0E-26 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 SUPERFAMILY SSF51905 13 376 3.89E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 46 56 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 TIGRFAM TIGR02053 MerA: mercury(II) reductase 13 471 1.0E-143 T 14-10-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 Gene3D G3DSA:3.30.390.30 347 471 8.7E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 Gene3D G3DSA:3.50.50.60 150 271 3.2E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_2009 bcb2969b27bcfda189e7290cd67f00c9 471 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 328 1.0E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0571 fdc7e68c5cfc344bcd162abbe2887eec 461 Gene3D G3DSA:3.40.50.300 11 214 2.1E-11 T 14-10-2018 Afer_0571 fdc7e68c5cfc344bcd162abbe2887eec 461 SUPERFAMILY SSF52540 9 278 1.49E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0571 fdc7e68c5cfc344bcd162abbe2887eec 461 Pfam PF13191 AAA ATPase domain 22 197 6.5E-13 T 14-10-2018 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 Pfam PF02674 Colicin V production protein 11 151 1.5E-15 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 Gene3D G3DSA:2.40.10.10 280 382 1.9E-18 T 14-10-2018 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 Gene3D G3DSA:2.40.10.10 190 276 3.5E-14 T 14-10-2018 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 Pfam PF13365 Trypsin-like peptidase domain 219 356 6.0E-21 T 14-10-2018 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 PRINTS PR00834 HtrA/DegQ protease family signature 248 268 3.8E-13 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 PRINTS PR00834 HtrA/DegQ protease family signature 227 239 3.8E-13 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 PRINTS PR00834 HtrA/DegQ protease family signature 327 344 3.8E-13 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 PRINTS PR00834 HtrA/DegQ protease family signature 287 311 3.8E-13 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 PRINTS PR00834 HtrA/DegQ protease family signature 349 366 3.8E-13 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_1990 c6c5db470eb0dbafde6a5098440992cf 398 SUPERFAMILY SSF50494 193 373 6.85E-34 T 14-10-2018 IPR009003 Peptidase S1, PA clan Afer_1026 027934d9e5c958eedc235155f6da6828 562 SUPERFAMILY SSF51905 14 326 7.13E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1026 027934d9e5c958eedc235155f6da6828 562 SMART SM00450 463 558 2.9E-16 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1026 027934d9e5c958eedc235155f6da6828 562 SUPERFAMILY SSF55424 334 454 8.93E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 1.0E-21 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 260 1.0E-21 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 1.0E-21 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 120 138 1.0E-21 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 1.0E-21 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 286 293 6.0E-14 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 17 39 6.0E-14 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 245 259 6.0E-14 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 6.0E-14 T 14-10-2018 Afer_1026 027934d9e5c958eedc235155f6da6828 562 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 341 441 1.4E-15 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 Afer_1026 027934d9e5c958eedc235155f6da6828 562 Pfam PF00581 Rhodanese-like domain 465 550 2.1E-11 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1026 027934d9e5c958eedc235155f6da6828 562 Gene3D G3DSA:3.50.50.60 17 349 2.2E-168 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1026 027934d9e5c958eedc235155f6da6828 562 Gene3D G3DSA:3.40.250.10 461 551 3.2E-21 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1026 027934d9e5c958eedc235155f6da6828 562 SUPERFAMILY SSF52821 444 551 6.55E-25 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1026 027934d9e5c958eedc235155f6da6828 562 Gene3D G3DSA:3.50.50.60 129 449 2.2E-168 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1026 027934d9e5c958eedc235155f6da6828 562 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 316 3.0E-64 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 444 462 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 140 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 230 242 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 522 543 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 189 213 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 307 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 409 430 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 385 400 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 472 491 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 339 360 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 259 277 2.2E-66 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 Gene3D G3DSA:1.20.210.10 103 622 4.6E-160 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 341 395 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 SUPERFAMILY SSF81442 111 617 6.54E-136 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1707 1f163c4dd736111d3f361b7a13fab1f3 649 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 125 562 1.8E-114 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1976 40ca9e5bcf93d1fddb8604ddfb9e40b1 541 Pfam PF00534 Glycosyl transferases group 1 221 354 1.4E-7 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_1976 40ca9e5bcf93d1fddb8604ddfb9e40b1 541 Gene3D G3DSA:3.40.50.2000 215 360 1.1E-17 T 14-10-2018 Afer_1976 40ca9e5bcf93d1fddb8604ddfb9e40b1 541 SUPERFAMILY SSF53756 33 357 8.16E-28 T 14-10-2018 Afer_1005 8de82fc6d4976e59c4532f380167ee49 231 SMART SM01118 7 198 7.5E-8 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Afer_1005 8de82fc6d4976e59c4532f380167ee49 231 SUPERFAMILY SSF55154 8 215 1.16E-26 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 Afer_1005 8de82fc6d4976e59c4532f380167ee49 231 Pfam PF01928 CYTH domain 9 179 2.0E-16 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 Afer_1005 8de82fc6d4976e59c4532f380167ee49 231 Gene3D G3DSA:2.40.320.10 8 196 2.0E-17 T 14-10-2018 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Pfam PF00809 Pterin binding enzyme 340 576 4.0E-46 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Pfam PF02607 B12 binding domain 635 707 3.5E-25 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Gene3D G3DSA:3.20.20.330 2 319 1.7E-92 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 TIGRFAM TIGR02082 metH: methionine synthase 9 1150 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Pfam PF02310 B12 binding domain 720 837 9.2E-19 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 PIRSF PIRSF000381 1 1151 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 SMART SM01018 631 714 9.2E-32 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 SUPERFAMILY SSF47644 628 712 5.75E-22 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Gene3D G3DSA:3.40.50.280 716 862 4.7E-40 T 14-10-2018 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Gene3D G3DSA:3.10.196.10 889 1149 1.1E-59 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Pfam PF02574 Homocysteine S-methyltransferase 13 305 5.5E-63 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 SUPERFAMILY SSF82282 3 379 3.79E-107 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Gene3D G3DSA:1.10.288.10 905 960 1.1E-59 T 14-10-2018 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Gene3D G3DSA:1.10.1240.10 624 711 1.7E-26 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 SUPERFAMILY SSF56507 877 1151 4.71E-89 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 923 1150 6.4E-41 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 SUPERFAMILY SSF52242 715 848 8.01E-36 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 SUPERFAMILY SSF51717 337 603 1.3E-77 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0723 9991c648f3bf74c5a838ce35172c1ec2 1151 Gene3D G3DSA:3.20.20.20 325 623 2.6E-99 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_1210 2b387f0007dc5e8fc9a4bf7e9815139f 161 Pfam PF01252 Signal peptidase (SPase) II 25 154 6.6E-27 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Afer_1210 2b387f0007dc5e8fc9a4bf7e9815139f 161 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 6.7E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Afer_1210 2b387f0007dc5e8fc9a4bf7e9815139f 161 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 102 117 6.7E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Afer_1210 2b387f0007dc5e8fc9a4bf7e9815139f 161 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 60 68 6.7E-15 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Afer_1210 2b387f0007dc5e8fc9a4bf7e9815139f 161 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 16 161 12.527 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 Afer_0848 43d5d4b9730672e675ea010d0992c6e6 298 Gene3D G3DSA:3.40.50.12300 1 288 1.2E-64 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily Afer_0848 43d5d4b9730672e675ea010d0992c6e6 298 SUPERFAMILY SSF142338 2 281 1.83E-55 T 14-10-2018 Afer_0848 43d5d4b9730672e675ea010d0992c6e6 298 Pfam PF01933 Uncharacterised protein family UPF0052 4 252 1.8E-55 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 Gene3D G3DSA:1.10.8.80 200 280 1.2E-11 T 14-10-2018 Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 Pfam PF13519 von Willebrand factor type A domain 441 545 3.5E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 SUPERFAMILY SSF53300 441 590 5.48E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 Gene3D G3DSA:3.40.50.300 1 165 3.7E-43 T 14-10-2018 Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 SMART SM00327 438 607 4.8E-10 T 14-10-2018 IPR002035 von Willebrand factor, type A Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 Pfam PF07728 AAA domain (dynein-related subfamily) 28 158 1.4E-13 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 SMART SM00382 25 168 6.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 Gene3D G3DSA:3.40.50.410 430 607 2.1E-16 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Afer_0817 e8610a88ac1cf48cba1a51fc6ca84d74 607 SUPERFAMILY SSF52540 3 265 3.92E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 SUPERFAMILY SSF53732 15 493 3.66E-150 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 TIGRFAM TIGR01340 aconitase_mito: aconitate hydratase, mitochondrial 24 748 0.0 T 14-10-2018 IPR006248 Aconitase, mitochondrial-like GO:0003994|GO:0006099|GO:0051539 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 PRINTS PR00415 Aconitase family signature 155 168 1.1E-34 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 PRINTS PR00415 Aconitase family signature 359 370 1.1E-34 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 PRINTS PR00415 Aconitase family signature 135 143 1.1E-34 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 PRINTS PR00415 Aconitase family signature 325 339 1.1E-34 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 PRINTS PR00415 Aconitase family signature 231 244 1.1E-34 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 PRINTS PR00415 Aconitase family signature 245 258 1.1E-34 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 PRINTS PR00415 Aconitase family signature 169 184 1.1E-34 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 PRINTS PR00415 Aconitase family signature 418 431 1.1E-34 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 Pfam PF00330 Aconitase family (aconitate hydratase) 39 481 2.5E-149 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 Gene3D G3DSA:3.30.499.10 10 200 4.3E-77 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 Pfam PF00694 Aconitase C-terminal domain 558 684 1.6E-35 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 Gene3D G3DSA:3.40.1060.10 201 323 5.0E-37 T 14-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 SUPERFAMILY SSF52016 530 751 1.84E-60 T 14-10-2018 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 Gene3D G3DSA:3.30.499.10 324 495 2.9E-58 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 ProSitePatterns PS00450 Aconitase family signature 1. 355 371 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 Gene3D G3DSA:3.20.19.10 534 754 2.3E-90 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Afer_1408 c9943bc193c948bbbadb8a1a2b3aff62 755 ProSitePatterns PS01244 Aconitase family signature 2. 418 431 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 8 387 3.7E-142 T 14-10-2018 IPR002155 Thiolase GO:0016747 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 Pfam PF00108 Thiolase, N-terminal domain 7 258 1.4E-70 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 Gene3D G3DSA:3.40.47.10 8 271 4.5E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 SUPERFAMILY SSF53901 3 261 5.26E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 Gene3D G3DSA:3.40.47.10 131 386 4.5E-144 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 ProSitePatterns PS00737 Thiolases signature 2. 335 351 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 Pfam PF02803 Thiolase, C-terminal domain 266 388 4.7E-45 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 89 107 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 SUPERFAMILY SSF53901 266 388 2.3E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0261 da6f747eaf99c7aab4719eaaac5c2311 390 PIRSF PIRSF000429 1 390 3.0E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 Afer_0601 08e347b5423c90ecf6df5150c5fa622b 266 Pfam PF08241 Methyltransferase domain 68 157 5.4E-10 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Afer_0601 08e347b5423c90ecf6df5150c5fa622b 266 SUPERFAMILY SSF53335 17 206 3.28E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0601 08e347b5423c90ecf6df5150c5fa622b 266 Gene3D G3DSA:3.40.50.150 45 226 1.5E-13 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00097 Anthranilate synthase component II signature 261 272 3.6E-6 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00097 Anthranilate synthase component II signature 234 243 3.6E-6 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00097 Anthranilate synthase component II signature 349 362 3.6E-6 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 193 207 8.1E-33 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 261 277 8.1E-33 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 303 314 8.1E-33 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 231 245 8.1E-33 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 278 295 8.1E-33 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 SUPERFAMILY SSF52317 183 363 1.41E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 SMART SM01097 11 147 1.3E-31 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 Gene3D G3DSA:3.40.50.880 163 375 1.5E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 SUPERFAMILY SSF52021 12 154 1.96E-33 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 13 146 3.1E-38 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 Pfam PF00117 Glutamine amidotransferase class-I 212 363 2.6E-30 T 14-10-2018 IPR017926 Glutamine amidotransferase Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 Gene3D G3DSA:3.50.30.20 11 162 1.7E-34 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 234 243 3.0E-11 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 261 272 3.0E-11 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.0E-11 T 14-10-2018 Afer_1700 e33ef532f2ecd0e42875f014323d3b10 381 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 38 372 3.3E-100 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1648 6cbd2b00899bd3f272ff59b2fbac9864 146 Gene3D G3DSA:1.20.120.1870 11 140 9.3E-23 T 14-10-2018 Afer_1648 6cbd2b00899bd3f272ff59b2fbac9864 146 SUPERFAMILY SSF140931 57 102 6.67E-5 T 14-10-2018 IPR036597 Fido-like domain superfamily Afer_1648 6cbd2b00899bd3f272ff59b2fbac9864 146 Pfam PF02661 Fic/DOC family 48 90 2.8E-5 T 14-10-2018 IPR003812 Fido domain Afer_1648 6cbd2b00899bd3f272ff59b2fbac9864 146 TIGRFAM TIGR01550 DOC_P1: death-on-curing family protein 61 127 9.3E-13 T 14-10-2018 IPR006440 Death on curing protein GO:0016301 Afer_0360 6bcd546a839d422ec20563661cd7660c 734 Gene3D G3DSA:1.50.10.10 266 653 1.3E-52 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Afer_0360 6bcd546a839d422ec20563661cd7660c 734 Pfam PF06202 Amylo-alpha-1,6-glucosidase 286 567 4.4E-6 T 14-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 Afer_0360 6bcd546a839d422ec20563661cd7660c 734 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 18 209 2.5E-36 T 14-10-2018 IPR032856 Putative glycogen debranching enzyme, N-terminal Afer_0360 6bcd546a839d422ec20563661cd7660c 734 SUPERFAMILY SSF48208 241 700 2.02E-78 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Afer_0438 ee0bca647d8d42ac0037ac25c792b8b2 189 Gene3D G3DSA:3.40.470.10 5 188 5.9E-63 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Afer_0438 ee0bca647d8d42ac0037ac25c792b8b2 189 SUPERFAMILY SSF52141 4 167 1.44E-57 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Afer_0438 ee0bca647d8d42ac0037ac25c792b8b2 189 SMART SM00987 30 174 2.4E-34 T 14-10-2018 Afer_0438 ee0bca647d8d42ac0037ac25c792b8b2 189 Pfam PF03167 Uracil DNA glycosylase superfamily 30 165 2.0E-41 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Afer_0438 ee0bca647d8d42ac0037ac25c792b8b2 189 SMART SM00986 30 174 2.4E-34 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 Afer_0438 ee0bca647d8d42ac0037ac25c792b8b2 189 TIGRFAM TIGR00758 UDG_fam4: uracil-DNA glycosylase, family 4 16 167 3.2E-49 T 14-10-2018 IPR005273 Uracil-DNA glycosylase family 4 Afer_0213 ace01dfe28070caa0d146c5856137c18 141 SUPERFAMILY SSF50341 7 138 2.22E-29 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 Afer_0213 ace01dfe28070caa0d146c5856137c18 141 Pfam PF01584 CheW-like domain 8 139 8.0E-26 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Afer_0213 ace01dfe28070caa0d146c5856137c18 141 Gene3D G3DSA:2.30.30.40 9 131 1.0E-27 T 14-10-2018 Afer_0213 ace01dfe28070caa0d146c5856137c18 141 SMART SM00260 2 137 4.0E-22 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 Afer_0213 ace01dfe28070caa0d146c5856137c18 141 Gene3D G3DSA:2.40.50.180 23 137 1.0E-27 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 SUPERFAMILY SSF81660 319 452 7.19E-30 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Afer_1177 b9dbed79716475d5df2e68452712587f 685 Gene3D G3DSA:2.70.150.20 101 210 3.2E-28 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 21 682 40.101 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Afer_1177 b9dbed79716475d5df2e68452712587f 685 Pfam PF00702 haloacid dehalogenase-like hydrolase 305 532 1.4E-31 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 308 322 3.5E-26 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 465 475 3.5E-26 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 541 553 3.5E-26 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 443 454 3.5E-26 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 518 537 3.5E-26 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 157 171 3.5E-26 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 Gene3D G3DSA:1.20.1110.10 211 322 1.1E-6 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 SUPERFAMILY SSF56784 296 561 3.57E-37 T 14-10-2018 IPR036412 HAD-like superfamily Afer_1177 b9dbed79716475d5df2e68452712587f 685 Gene3D G3DSA:1.20.1110.10 563 610 7.2E-25 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 Gene3D G3DSA:3.40.50.1000 494 562 7.2E-25 T 14-10-2018 IPR023214 HAD superfamily Afer_1177 b9dbed79716475d5df2e68452712587f 685 SUPERFAMILY SSF81665 43 611 1.83E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Afer_1177 b9dbed79716475d5df2e68452712587f 685 SUPERFAMILY SSF81653 114 210 6.54E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Afer_1177 b9dbed79716475d5df2e68452712587f 685 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 78 330 9.4E-32 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_1177 b9dbed79716475d5df2e68452712587f 685 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 374 600 5.5E-46 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_1177 b9dbed79716475d5df2e68452712587f 685 Pfam PF00122 E1-E2 ATPase 109 287 9.0E-36 T 14-10-2018 Afer_1177 b9dbed79716475d5df2e68452712587f 685 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 310 316 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 Afer_1177 b9dbed79716475d5df2e68452712587f 685 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 20 678 0.0 T 14-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 Afer_1177 b9dbed79716475d5df2e68452712587f 685 Gene3D G3DSA:3.40.1110.10 323 453 9.7E-44 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Afer_1943 42f7aa4712ee13d4d129b23f40c0866c 342 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 1 340 34.365 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1943 42f7aa4712ee13d4d129b23f40c0866c 342 Gene3D G3DSA:3.90.650.10 166 340 2.8E-44 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Afer_1943 42f7aa4712ee13d4d129b23f40c0866c 342 SUPERFAMILY SSF56042 167 335 7.63E-37 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Afer_1943 42f7aa4712ee13d4d129b23f40c0866c 342 Gene3D G3DSA:3.30.1330.10 1 164 4.9E-52 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Afer_1943 42f7aa4712ee13d4d129b23f40c0866c 342 SUPERFAMILY SSF55326 3 163 3.14E-36 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Afer_1943 42f7aa4712ee13d4d129b23f40c0866c 342 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 1 326 1.6E-88 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1943 42f7aa4712ee13d4d129b23f40c0866c 342 Pfam PF00586 AIR synthase related protein, N-terminal domain 55 159 1.0E-13 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Afer_1943 42f7aa4712ee13d4d129b23f40c0866c 342 Pfam PF02769 AIR synthase related protein, C-terminal domain 171 333 5.3E-21 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Afer_0586 f4bf6fc15e528f3cdc1c917524e85bb2 778 Pfam PF03176 MMPL family 48 367 1.8E-50 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Afer_0586 f4bf6fc15e528f3cdc1c917524e85bb2 778 Pfam PF03176 MMPL family 505 745 8.8E-48 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 Afer_0586 f4bf6fc15e528f3cdc1c917524e85bb2 778 SUPERFAMILY SSF82866 512 742 5.23E-25 T 14-10-2018 Afer_0586 f4bf6fc15e528f3cdc1c917524e85bb2 778 SUPERFAMILY SSF82866 139 342 2.49E-28 T 14-10-2018 Afer_0586 f4bf6fc15e528f3cdc1c917524e85bb2 778 Gene3D G3DSA:1.20.1640.10 137 341 6.3E-11 T 14-10-2018 Afer_0242 349aa8b7b4162ec80b9635ed0251562c 447 Gene3D G3DSA:3.30.590.10 108 446 3.8E-117 T 14-10-2018 Afer_0242 349aa8b7b4162ec80b9635ed0251562c 447 SUPERFAMILY SSF54368 10 104 7.19E-26 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0242 349aa8b7b4162ec80b9635ed0251562c 447 SUPERFAMILY SSF55931 105 444 1.57E-107 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Afer_0242 349aa8b7b4162ec80b9635ed0251562c 447 Pfam PF00120 Glutamine synthetase, catalytic domain 106 443 5.1E-110 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0242 349aa8b7b4162ec80b9635ed0251562c 447 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 21 98 1.9E-21 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 Afer_0242 349aa8b7b4162ec80b9635ed0251562c 447 SMART SM01230 105 357 7.9E-109 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0242 349aa8b7b4162ec80b9635ed0251562c 447 Gene3D G3DSA:3.10.20.70 8 107 1.6E-27 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_2021 6b44f2452b10c411ae1368e0ba83b0b9 287 Gene3D G3DSA:3.40.830.10 1 284 9.5E-59 T 14-10-2018 Afer_2021 6b44f2452b10c411ae1368e0ba83b0b9 287 SUPERFAMILY SSF53213 4 265 1.27E-48 T 14-10-2018 Afer_2021 6b44f2452b10c411ae1368e0ba83b0b9 287 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 10 265 3.7E-24 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Afer_0776 cbd544f1429fcc134c2df110a0f78b6a 173 Gene3D G3DSA:1.20.120.450 8 170 1.7E-35 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Afer_0776 cbd544f1429fcc134c2df110a0f78b6a 173 Pfam PF04978 Protein of unknown function (DUF664) 26 169 8.6E-42 T 14-10-2018 IPR007061 Protein of unknown function DUF664 Afer_0776 cbd544f1429fcc134c2df110a0f78b6a 173 SUPERFAMILY SSF109854 10 168 8.01E-39 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Afer_1375 ab56be16f58101c5c1191c3d18c80e97 288 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 17 190 8.9E-49 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Afer_1375 ab56be16f58101c5c1191c3d18c80e97 288 Gene3D G3DSA:3.40.50.720 9 195 1.5E-52 T 14-10-2018 Afer_1375 ab56be16f58101c5c1191c3d18c80e97 288 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 21 38 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 Afer_1375 ab56be16f58101c5c1191c3d18c80e97 288 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 193 288 2.0E-23 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Afer_1375 ab56be16f58101c5c1191c3d18c80e97 288 PIRSF PIRSF000105 10 288 5.1E-71 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Afer_1375 ab56be16f58101c5c1191c3d18c80e97 288 SUPERFAMILY SSF48179 192 288 6.12E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Afer_1375 ab56be16f58101c5c1191c3d18c80e97 288 SUPERFAMILY SSF51735 15 192 3.83E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1375 ab56be16f58101c5c1191c3d18c80e97 288 Gene3D G3DSA:1.10.1040.10 196 288 4.0E-28 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Afer_0440 3e9d41f9cb6781f9918b3c58a5fae63b 215 Gene3D G3DSA:3.30.420.200 93 117 3.9E-6 T 14-10-2018 Afer_0440 3e9d41f9cb6781f9918b3c58a5fae63b 215 Gene3D G3DSA:3.30.420.40 57 92 3.9E-6 T 14-10-2018 Afer_0440 3e9d41f9cb6781f9918b3c58a5fae63b 215 SUPERFAMILY SSF53067 8 100 1.04E-6 T 14-10-2018 Afer_0440 3e9d41f9cb6781f9918b3c58a5fae63b 215 Pfam PF00814 Glycoprotease family 56 121 3.4E-7 T 14-10-2018 IPR000905 Gcp-like domain Afer_0072 0e3c7ac6675336eb9ac3540aae02ac82 1101 Gene3D G3DSA:1.10.10.10 14 113 7.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0072 0e3c7ac6675336eb9ac3540aae02ac82 1101 SUPERFAMILY SSF52540 288 499 2.89E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0072 0e3c7ac6675336eb9ac3540aae02ac82 1101 SMART SM01043 120 264 1.8E-11 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Afer_0072 0e3c7ac6675336eb9ac3540aae02ac82 1101 SUPERFAMILY SSF48452 117 271 8.67E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Afer_0072 0e3c7ac6675336eb9ac3540aae02ac82 1101 Gene3D G3DSA:1.25.40.10 118 291 8.4E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Afer_0072 0e3c7ac6675336eb9ac3540aae02ac82 1101 Pfam PF13191 AAA ATPase domain 289 458 3.2E-18 T 14-10-2018 Afer_0072 0e3c7ac6675336eb9ac3540aae02ac82 1101 Pfam PF03704 Bacterial transcriptional activator domain 120 262 1.2E-12 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain Afer_1255 d1e0c7c5b8278671e4a26b9251176662 91 Gene3D G3DSA:3.30.70.920 1 70 8.0E-16 T 14-10-2018 Afer_1255 d1e0c7c5b8278671e4a26b9251176662 91 SUPERFAMILY SSF54909 1 67 7.24E-11 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Afer_1255 d1e0c7c5b8278671e4a26b9251176662 91 Pfam PF01037 Lrp/AsnC ligand binding domain 1 66 2.8E-8 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 SUPERFAMILY SSF54919 1 135 2.62E-48 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 113 121 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 Gene3D G3DSA:3.30.70.141 1 136 3.4E-51 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 Pfam PF00334 Nucleoside diphosphate kinase 2 135 2.5E-47 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 29.532 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 1.1E-36 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 1.1E-36 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 90 106 1.1E-36 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 1.1E-36 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 PRINTS PR01243 Nucleoside diphosphate kinase signature 113 132 1.1E-36 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_0765 fc400b35845cd2bb754561c7c09b2ba2 136 SMART SM00562 1 136 2.9E-61 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 Afer_1128 2c9d173c552ba6a36274b7af121e7bfd 168 Gene3D G3DSA:3.10.690.10 1 143 8.7E-46 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Afer_1128 2c9d173c552ba6a36274b7af121e7bfd 168 SUPERFAMILY SSF103256 4 139 3.92E-39 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Afer_1128 2c9d173c552ba6a36274b7af121e7bfd 168 Pfam PF02577 Bifunctional nuclease 8 134 3.9E-41 T 14-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 Afer_0562 a5d648a465143312c99d6ada5c6f1061 106 SUPERFAMILY SSF50022 3 103 7.86E-24 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Afer_0562 a5d648a465143312c99d6ada5c6f1061 106 Pfam PF00355 Rieske [2Fe-2S] domain 3 85 7.0E-16 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Afer_0562 a5d648a465143312c99d6ada5c6f1061 106 Gene3D G3DSA:2.102.10.10 1 103 6.9E-29 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 Gene3D G3DSA:3.40.50.1370 131 290 9.8E-73 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 SUPERFAMILY SSF53671 12 304 4.84E-64 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 147 299 3.7E-35 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 Gene3D G3DSA:3.40.50.1370 20 294 9.8E-73 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 12 141 5.9E-23 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 260 265 5.8E-8 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 127 144 5.8E-8 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 5.8E-8 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 128 139 3.5E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 3.5E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 3.5E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_1661 3457e6f339256a8777eeb4649c0e8767 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 3.5E-18 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_0205 069d10c1f9251e3f8fd1f4e91c1854dd 385 Gene3D G3DSA:3.40.50.300 202 378 5.1E-19 T 14-10-2018 Afer_0205 069d10c1f9251e3f8fd1f4e91c1854dd 385 Gene3D G3DSA:3.40.50.300 27 157 2.0E-10 T 14-10-2018 Afer_0205 069d10c1f9251e3f8fd1f4e91c1854dd 385 Pfam PF01935 Domain of unknown function DUF87 58 111 2.0E-8 T 14-10-2018 IPR002789 Helicase HerA, central domain Afer_0205 069d10c1f9251e3f8fd1f4e91c1854dd 385 SMART SM00382 54 323 2.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0205 069d10c1f9251e3f8fd1f4e91c1854dd 385 SUPERFAMILY SSF52540 13 367 3.65E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0798 7240abe1418cecfe0251c9d77a387360 552 SUPERFAMILY SSF56801 10 539 7.85E-126 T 14-10-2018 Afer_0798 7240abe1418cecfe0251c9d77a387360 552 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 523 2.2E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_0798 7240abe1418cecfe0251c9d77a387360 552 Gene3D G3DSA:3.40.50.12780 1 433 8.7E-110 T 14-10-2018 Afer_0798 7240abe1418cecfe0251c9d77a387360 552 Pfam PF00501 AMP-binding enzyme 21 438 3.8E-81 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_0798 7240abe1418cecfe0251c9d77a387360 552 Gene3D G3DSA:3.30.300.310 434 538 4.2E-30 T 14-10-2018 Afer_0798 7240abe1418cecfe0251c9d77a387360 552 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 14-10-2018 IPR020845 AMP-binding, conserved site Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 28 143 6.5E-26 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 SUPERFAMILY SSF54665 5 163 1.44E-42 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 Gene3D G3DSA:3.30.365.10 178 411 2.6E-68 T 14-10-2018 Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 SMART SM01008 28 144 2.1E-46 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 Gene3D G3DSA:3.90.1170.50 2 143 4.7E-44 T 14-10-2018 Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 Gene3D G3DSA:3.30.365.10 434 785 6.4E-142 T 14-10-2018 Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 SUPERFAMILY SSF56003 136 788 4.32E-197 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 Gene3D G3DSA:3.30.365.10 471 640 6.4E-142 T 14-10-2018 Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 160 725 5.7E-176 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Afer_1569 805e5d1ebb50e8504968ed1b663fb37d 795 Gene3D G3DSA:3.30.365.10 202 296 2.6E-68 T 14-10-2018 Afer_0983 1ab625d4ac84165e382cfc4d81cc2cc9 314 Gene3D G3DSA:1.20.120.920 104 292 4.9E-73 T 14-10-2018 Afer_0983 1ab625d4ac84165e382cfc4d81cc2cc9 314 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 23 282 18.261 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Afer_0983 1ab625d4ac84165e382cfc4d81cc2cc9 314 Pfam PF01867 CRISPR associated protein Cas1 32 130 1.7E-5 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Afer_0983 1ab625d4ac84165e382cfc4d81cc2cc9 314 Pfam PF01867 CRISPR associated protein Cas1 141 248 5.7E-11 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Afer_0983 1ab625d4ac84165e382cfc4d81cc2cc9 314 Gene3D G3DSA:3.100.10.20 16 103 1.8E-24 T 14-10-2018 Afer_0983 1ab625d4ac84165e382cfc4d81cc2cc9 314 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 141 248 3.7E-26 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 Afer_0983 1ab625d4ac84165e382cfc4d81cc2cc9 314 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 19 281 3.5E-102 T 14-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 Gene3D G3DSA:1.10.10.2720 74 143 1.1E-28 T 14-10-2018 Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 6 142 28.995 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 SUPERFAMILY SSF46906 68 140 3.14E-25 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 SMART SM00649 10 141 8.8E-70 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 SUPERFAMILY SSF54747 4 73 3.4E-25 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 Gene3D G3DSA:3.30.1550.10 3 73 1.3E-28 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 4 141 7.8E-58 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 37 74 3.0E-13 T 14-10-2018 Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 10 67 1.1E-24 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal Afer_0387 31fc2314a99715bcfe1e0d3ccb50030c 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.1E-24 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 Afer_1818 07a55d18f62a3a3b9c2d71df66f0f8bd 209 Pfam PF09335 SNARE associated Golgi protein 36 162 6.7E-21 T 14-10-2018 IPR032816 SNARE associated Golgi protein Afer_0589 b8f42c8b550a72b74e86677c2fffa726 265 Gene3D G3DSA:3.40.50.10320 13 263 7.9E-56 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Afer_0589 b8f42c8b550a72b74e86677c2fffa726 265 SUPERFAMILY SSF102588 34 218 1.07E-43 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Afer_0589 b8f42c8b550a72b74e86677c2fffa726 265 Pfam PF02585 GlcNAc-PI de-N-acetylase 38 164 1.1E-25 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Afer_0508 d38922fc9c094dfabebbb129f8e55f20 224 Gene3D G3DSA:1.10.10.10 159 211 1.6E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0508 d38922fc9c094dfabebbb129f8e55f20 224 PIRSF PIRSF006171 1 224 2.4E-71 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 Afer_0508 d38922fc9c094dfabebbb129f8e55f20 224 Pfam PF00072 Response regulator receiver domain 5 117 1.3E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0508 d38922fc9c094dfabebbb129f8e55f20 224 Gene3D G3DSA:3.40.50.2300 2 142 1.5E-29 T 14-10-2018 Afer_0508 d38922fc9c094dfabebbb129f8e55f20 224 SMART SM00448 3 117 4.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0508 d38922fc9c094dfabebbb129f8e55f20 224 SUPERFAMILY SSF52172 3 134 4.55E-33 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0508 d38922fc9c094dfabebbb129f8e55f20 224 Pfam PF09339 IclR helix-turn-helix domain 165 206 3.2E-7 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Afer_0508 d38922fc9c094dfabebbb129f8e55f20 224 SUPERFAMILY SSF46785 160 212 1.02E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1021 e5d2359bf767bc5398dec3ecc556953b 512 Gene3D G3DSA:3.30.70.20 73 125 7.1E-62 T 14-10-2018 Afer_1021 e5d2359bf767bc5398dec3ecc556953b 512 SUPERFAMILY SSF54862 11 187 7.22E-65 T 14-10-2018 Afer_1021 e5d2359bf767bc5398dec3ecc556953b 512 Pfam PF03916 Polysulphide reductase, NrfD 244 488 9.3E-17 T 14-10-2018 IPR005614 NrfD family Afer_1021 e5d2359bf767bc5398dec3ecc556953b 512 Gene3D G3DSA:3.30.70.20 14 186 7.1E-62 T 14-10-2018 Afer_1021 e5d2359bf767bc5398dec3ecc556953b 512 Pfam PF12800 4Fe-4S binding domain 19 34 0.16 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_1021 e5d2359bf767bc5398dec3ecc556953b 512 Pfam PF13247 4Fe-4S dicluster domain 62 154 9.9E-24 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_1021 e5d2359bf767bc5398dec3ecc556953b 512 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_1252 37f6037607461e6e85a25473b2d6ec4c 319 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 6 299 32.689 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Afer_1252 37f6037607461e6e85a25473b2d6ec4c 319 SUPERFAMILY SSF81799 108 205 3.53E-22 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Afer_1252 37f6037607461e6e85a25473b2d6ec4c 319 Gene3D G3DSA:1.10.150.170 107 208 5.1E-83 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 Afer_1252 37f6037607461e6e85a25473b2d6ec4c 319 Gene3D G3DSA:3.40.50.150 6 295 5.1E-83 T 14-10-2018 Afer_1252 37f6037607461e6e85a25473b2d6ec4c 319 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 5 298 4.0E-72 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Afer_1252 37f6037607461e6e85a25473b2d6ec4c 319 SUPERFAMILY SSF53335 6 299 3.84E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1252 37f6037607461e6e85a25473b2d6ec4c 319 Pfam PF01795 MraW methylase family 5 298 1.6E-82 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Afer_1252 37f6037607461e6e85a25473b2d6ec4c 319 PIRSF PIRSF004486 1 300 1.1E-86 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 Afer_0024 3a69ce6280fe4e8c6655dd759ea86625 343 Pfam PF00850 Histone deacetylase domain 21 300 7.0E-70 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Afer_0024 3a69ce6280fe4e8c6655dd759ea86625 343 Gene3D G3DSA:3.40.800.20 3 339 1.0E-98 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Afer_0024 3a69ce6280fe4e8c6655dd759ea86625 343 SUPERFAMILY SSF52768 3 308 3.88E-94 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Afer_0024 3a69ce6280fe4e8c6655dd759ea86625 343 PRINTS PR01270 Histone deacetylase superfamily signature 120 143 8.4E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Afer_0024 3a69ce6280fe4e8c6655dd759ea86625 343 PRINTS PR01270 Histone deacetylase superfamily signature 236 246 8.4E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Afer_0024 3a69ce6280fe4e8c6655dd759ea86625 343 PRINTS PR01270 Histone deacetylase superfamily signature 152 167 8.4E-15 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 Afer_0621 59aeabdfe834f4033006ab1ef66eed49 310 SUPERFAMILY SSF103481 44 148 2.35E-7 T 14-10-2018 Afer_0621 59aeabdfe834f4033006ab1ef66eed49 310 SUPERFAMILY SSF103481 194 292 1.07E-6 T 14-10-2018 Afer_0621 59aeabdfe834f4033006ab1ef66eed49 310 Pfam PF00892 EamA-like transporter family 10 147 2.3E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_0621 59aeabdfe834f4033006ab1ef66eed49 310 Pfam PF00892 EamA-like transporter family 159 288 2.2E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_0859 8ddfc425d3a63ba46df0d1a85d0eb4ea 220 SUPERFAMILY SSF52833 11 213 2.13E-65 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_0859 8ddfc425d3a63ba46df0d1a85d0eb4ea 220 Gene3D G3DSA:3.40.30.10 10 153 1.2E-50 T 14-10-2018 Afer_0859 8ddfc425d3a63ba46df0d1a85d0eb4ea 220 PIRSF PIRSF000239 6 216 2.5E-76 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Afer_0859 8ddfc425d3a63ba46df0d1a85d0eb4ea 220 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 197 7.1E-8 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Afer_0859 8ddfc425d3a63ba46df0d1a85d0eb4ea 220 Pfam PF00578 AhpC/TSA family 14 143 7.3E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Afer_0859 8ddfc425d3a63ba46df0d1a85d0eb4ea 220 Gene3D G3DSA:3.30.1020.10 154 220 3.2E-17 T 14-10-2018 Afer_1631 b977e100a9f1c37e6373ac1aab498b17 650 SUPERFAMILY SSF52833 2 143 1.59E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_1631 b977e100a9f1c37e6373ac1aab498b17 650 Gene3D G3DSA:3.40.30.10 2 167 4.8E-51 T 14-10-2018 Afer_1631 b977e100a9f1c37e6373ac1aab498b17 650 Pfam PF03190 Protein of unknown function, DUF255 3 161 1.8E-56 T 14-10-2018 IPR004879 Domain of unknown function DUF255 Afer_1631 b977e100a9f1c37e6373ac1aab498b17 650 SUPERFAMILY SSF48208 187 522 6.46E-22 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Afer_1631 b977e100a9f1c37e6373ac1aab498b17 650 PIRSF PIRSF006402 1 646 1.7E-119 T 14-10-2018 IPR024705 Spermatogenesis-associated protein 20 Afer_1039 33a9edcb16b2b7acca517202613f2a79 453 SUPERFAMILY SSF81340 7 446 1.57E-96 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Afer_1039 33a9edcb16b2b7acca517202613f2a79 453 Pfam PF00654 Voltage gated chloride channel 86 431 4.0E-83 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_1039 33a9edcb16b2b7acca517202613f2a79 453 PRINTS PR00762 Chloride channel signature 128 147 6.2E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_1039 33a9edcb16b2b7acca517202613f2a79 453 PRINTS PR00762 Chloride channel signature 179 198 6.2E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_1039 33a9edcb16b2b7acca517202613f2a79 453 PRINTS PR00762 Chloride channel signature 400 419 6.2E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_1039 33a9edcb16b2b7acca517202613f2a79 453 PRINTS PR00762 Chloride channel signature 347 367 6.2E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_1039 33a9edcb16b2b7acca517202613f2a79 453 PRINTS PR00762 Chloride channel signature 382 398 6.2E-23 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_1039 33a9edcb16b2b7acca517202613f2a79 453 Gene3D G3DSA:1.10.3080.10 2 451 1.3E-93 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Afer_1671 0e80dcc4eb78fe82a163a2e1c2f5fe9a 134 Pfam PF07843 Protein of unknown function (DUF1634) 20 131 1.2E-18 T 14-10-2018 IPR012861 Protein of unknown function DUF1634 Afer_0992 0b88431f9ff3414c8d8a78d35f21d715 257 SUPERFAMILY SSF52540 10 241 8.67E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0992 0b88431f9ff3414c8d8a78d35f21d715 257 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0992 0b88431f9ff3414c8d8a78d35f21d715 257 Pfam PF00005 ABC transporter 27 183 3.9E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0992 0b88431f9ff3414c8d8a78d35f21d715 257 Gene3D G3DSA:3.40.50.300 6 249 1.1E-59 T 14-10-2018 Afer_0992 0b88431f9ff3414c8d8a78d35f21d715 257 SMART SM00382 36 230 1.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0342 db069d0042e938e9566b918505797887 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 189 3.0E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_0342 db069d0042e938e9566b918505797887 196 Pfam PF00072 Response regulator receiver domain 4 109 6.1E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0342 db069d0042e938e9566b918505797887 196 Gene3D G3DSA:1.10.10.10 131 195 3.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0342 db069d0042e938e9566b918505797887 196 SMART SM00421 132 189 9.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_0342 db069d0042e938e9566b918505797887 196 SMART SM00448 1 110 1.2E-4 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0342 db069d0042e938e9566b918505797887 196 SUPERFAMILY SSF46894 121 195 7.14E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_0342 db069d0042e938e9566b918505797887 196 SUPERFAMILY SSF52172 3 125 1.57E-10 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0342 db069d0042e938e9566b918505797887 196 Gene3D G3DSA:3.40.50.2300 1 130 5.8E-11 T 14-10-2018 Afer_1832 233e62142614d4995c00a1dac1be0669 358 Gene3D G3DSA:3.40.50.10210 62 335 5.6E-123 T 14-10-2018 Afer_1832 233e62142614d4995c00a1dac1be0669 358 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 18 354 34.709 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Afer_1832 233e62142614d4995c00a1dac1be0669 358 SUPERFAMILY SSF52733 14 352 1.11E-107 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Afer_1832 233e62142614d4995c00a1dac1be0669 358 Pfam PF02277 Phosphoribosyltransferase 19 352 1.2E-122 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Afer_1832 233e62142614d4995c00a1dac1be0669 358 Gene3D G3DSA:1.10.1610.10 30 352 5.6E-123 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Afer_1832 233e62142614d4995c00a1dac1be0669 358 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 20 352 1.6E-123 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 Afer_0499 c83218a98bcdcd87239532ee33cb87d0 332 SUPERFAMILY SSF54197 4 175 3.87E-42 T 14-10-2018 IPR036265 HIT-like superfamily Afer_0499 c83218a98bcdcd87239532ee33cb87d0 332 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 4 175 4.0E-22 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Afer_0499 c83218a98bcdcd87239532ee33cb87d0 332 Gene3D G3DSA:3.30.428.10 5 322 3.7E-87 T 14-10-2018 IPR036265 HIT-like superfamily Afer_0499 c83218a98bcdcd87239532ee33cb87d0 332 PIRSF PIRSF000808 1 324 1.1E-68 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Afer_0499 c83218a98bcdcd87239532ee33cb87d0 332 Gene3D G3DSA:3.30.428.10 44 174 3.7E-87 T 14-10-2018 IPR036265 HIT-like superfamily Afer_0499 c83218a98bcdcd87239532ee33cb87d0 332 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 6 299 1.2E-32 T 14-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 Afer_0499 c83218a98bcdcd87239532ee33cb87d0 332 SUPERFAMILY SSF54197 182 322 8.0E-27 T 14-10-2018 IPR036265 HIT-like superfamily Afer_0336 0ab37eda49c94d5e903043ff74cadba8 162 SUPERFAMILY SSF82093 52 147 2.88E-16 T 14-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 Afer_0336 0ab37eda49c94d5e903043ff74cadba8 162 Pfam PF03100 CcmE 24 146 4.8E-23 T 14-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 Afer_0336 0ab37eda49c94d5e903043ff74cadba8 162 Gene3D G3DSA:2.40.50.140 49 153 1.1E-16 T 14-10-2018 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 430 549 1.3E-36 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Gene3D G3DSA:3.40.50.1380 951 1100 5.3E-37 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 4 1079 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 SUPERFAMILY SSF56059 677 948 2.12E-93 T 14-10-2018 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Gene3D G3DSA:3.30.470.20 120 403 2.2E-115 T 14-10-2018 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Pfam PF02142 MGS-like domain 971 1068 2.7E-19 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Gene3D G3DSA:3.30.470.20 670 950 3.4E-104 T 14-10-2018 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 677 885 3.7E-33 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 129 335 1.0E-63 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 849 856 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 165 179 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 SUPERFAMILY SSF48108 396 555 2.75E-46 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 SMART SM01096 426 549 4.0E-61 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Gene3D G3DSA:1.10.1030.10 407 555 3.9E-43 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 SUPERFAMILY SSF52335 950 1098 2.35E-31 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Gene3D G3DSA:3.40.50.20 556 669 1.1E-39 T 14-10-2018 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Gene3D G3DSA:3.40.50.20 1 116 1.2E-45 T 14-10-2018 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 SUPERFAMILY SSF56059 128 401 1.71E-98 T 14-10-2018 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 5.5E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 240 257 5.5E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 5.5E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 205 224 5.5E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 5.5E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 298 327 5.5E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 169 181 5.5E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 SUPERFAMILY SSF52440 1 127 1.15E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 SMART SM00851 970 1068 6.9E-24 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 SUPERFAMILY SSF52440 559 678 4.75E-38 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Afer_1699 0d9c996bc74674f3644f3b800f543725 1100 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1089 12.489 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1525 71eccee692656613d23bafbeaa02e577 1167 Pfam PF13185 GAF domain 147 293 4.2E-7 T 14-10-2018 IPR003018 GAF domain GO:0005515 Afer_1525 71eccee692656613d23bafbeaa02e577 1167 SMART SM00052 824 1061 7.1E-25 T 14-10-2018 IPR001633 EAL domain Afer_1525 71eccee692656613d23bafbeaa02e577 1167 SUPERFAMILY SSF55073 672 819 1.02E-37 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_1525 71eccee692656613d23bafbeaa02e577 1167 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 664 815 6.2E-30 T 14-10-2018 IPR000160 GGDEF domain Afer_1525 71eccee692656613d23bafbeaa02e577 1167 Pfam PF00990 Diguanylate cyclase, GGDEF domain 667 813 1.3E-32 T 14-10-2018 IPR000160 GGDEF domain Afer_1525 71eccee692656613d23bafbeaa02e577 1167 Gene3D G3DSA:3.30.450.40 118 308 2.4E-11 T 14-10-2018 IPR029016 GAF-like domain superfamily Afer_1525 71eccee692656613d23bafbeaa02e577 1167 Gene3D G3DSA:3.20.20.450 826 1072 3.7E-50 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1525 71eccee692656613d23bafbeaa02e577 1167 Pfam PF00563 EAL domain 836 1056 2.1E-38 T 14-10-2018 IPR001633 EAL domain Afer_1525 71eccee692656613d23bafbeaa02e577 1167 SMART SM00267 656 818 2.6E-45 T 14-10-2018 IPR000160 GGDEF domain Afer_1525 71eccee692656613d23bafbeaa02e577 1167 SUPERFAMILY SSF141868 834 1069 7.32E-46 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1525 71eccee692656613d23bafbeaa02e577 1167 Gene3D G3DSA:3.30.70.270 663 819 2.6E-44 T 14-10-2018 Afer_1525 71eccee692656613d23bafbeaa02e577 1167 SUPERFAMILY SSF55781 149 306 1.93E-9 T 14-10-2018 Afer_0435 b7b2a244cab67b5f2366173208595bf1 121 Gene3D G3DSA:3.90.470.20 3 119 2.4E-30 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Afer_0435 b7b2a244cab67b5f2366173208595bf1 121 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 120 20.437 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Afer_0435 b7b2a244cab67b5f2366173208595bf1 121 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 6 115 5.7E-17 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Afer_0435 b7b2a244cab67b5f2366173208595bf1 121 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 4 117 8.4E-25 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Afer_0435 b7b2a244cab67b5f2366173208595bf1 121 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 4 117 2.6E-23 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Afer_0435 b7b2a244cab67b5f2366173208595bf1 121 SUPERFAMILY SSF56214 5 117 4.19E-25 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 Afer_0435 b7b2a244cab67b5f2366173208595bf1 121 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 93 1.0E-11 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 Afer_0905 c4010cb8967a8d8a700aa21d55f329b1 296 SUPERFAMILY SSF53335 5 249 5.98E-60 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0905 c4010cb8967a8d8a700aa21d55f329b1 296 Gene3D G3DSA:3.10.330.20 1 65 6.6E-14 T 14-10-2018 Afer_0905 c4010cb8967a8d8a700aa21d55f329b1 296 Gene3D G3DSA:3.40.50.150 67 256 1.1E-51 T 14-10-2018 Afer_0905 c4010cb8967a8d8a700aa21d55f329b1 296 PIRSF PIRSF017269 1 262 2.6E-63 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 Afer_0905 c4010cb8967a8d8a700aa21d55f329b1 296 SMART SM00650 88 220 0.0017 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 Afer_0905 c4010cb8967a8d8a700aa21d55f329b1 296 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 71 230 4.5E-14 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 TIGRFAM TIGR01393 lepA: elongation factor 4 6 594 1.1E-279 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Pfam PF00009 Elongation factor Tu GTP binding domain 6 179 4.4E-51 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Pfam PF06421 GTP-binding protein LepA C-terminus 486 591 2.4E-50 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 PRINTS PR00315 GTP-binding elongation factor signature 88 99 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 PRINTS PR00315 GTP-binding elongation factor signature 52 60 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 PRINTS PR00315 GTP-binding elongation factor signature 72 82 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 PRINTS PR00315 GTP-binding elongation factor signature 124 133 3.0E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Gene3D G3DSA:3.30.70.3380 366 477 2.8E-36 T 14-10-2018 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Gene3D G3DSA:2.40.30.10 184 283 5.7E-28 T 14-10-2018 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 SUPERFAMILY SSF54980 397 492 1.44E-23 T 14-10-2018 IPR035647 EF-G domain III/V-like Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 174 2.7E-17 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 SMART SM00838 396 484 0.0024 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Gene3D G3DSA:3.30.70.2570 478 552 1.5E-34 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 SUPERFAMILY SSF54980 289 368 1.98E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Gene3D G3DSA:3.30.70.870 284 365 1.2E-37 T 14-10-2018 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 45 60 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Gene3D G3DSA:3.40.50.300 4 183 1.2E-67 T 14-10-2018 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Pfam PF00679 Elongation factor G C-terminus 397 484 3.3E-21 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 SUPERFAMILY SSF50447 163 286 2.21E-25 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 Hamap MF_00071 Elongation factor 4 [lepA]. 1 595 279.722 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 Afer_1296 3340e2cd509717a0fe2eb1a413017361 595 SUPERFAMILY SSF52540 5 203 2.19E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Gene3D G3DSA:3.30.10.20 555 628 1.9E-5 T 14-10-2018 Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Gene3D G3DSA:3.30.10.20 422 486 1.1E-8 T 14-10-2018 Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 134 146 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Pfam PF03793 PASTA domain 425 484 6.6E-5 T 14-10-2018 IPR005543 PASTA domain Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Pfam PF03793 PASTA domain 358 418 1.9E-5 T 14-10-2018 IPR005543 PASTA domain Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Pfam PF03793 PASTA domain 492 551 8.0E-12 T 14-10-2018 IPR005543 PASTA domain Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 SMART SM00220 13 275 5.5E-63 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 SMART SM00740 420 485 1.2 T 14-10-2018 IPR005543 PASTA domain Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 SMART SM00740 352 419 1.4 T 14-10-2018 IPR005543 PASTA domain Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 SMART SM00740 553 628 0.44 T 14-10-2018 IPR005543 PASTA domain Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 SMART SM00740 486 552 1.2E-10 T 14-10-2018 IPR005543 PASTA domain Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Gene3D G3DSA:1.10.510.10 91 277 7.9E-46 T 14-10-2018 Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 SUPERFAMILY SSF56112 10 312 5.9E-71 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Gene3D G3DSA:3.30.10.20 487 553 2.5E-16 T 14-10-2018 Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Gene3D G3DSA:3.30.10.20 354 420 1.7E-9 T 14-10-2018 Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Gene3D G3DSA:3.30.200.20 1 90 2.2E-23 T 14-10-2018 Afer_1553 f0b411d34ecc13ef74b876f6345dba75 630 Pfam PF00069 Protein kinase domain 13 263 2.9E-48 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Afer_0252 663f47451e815349117d47fd130cfc92 325 SMART SM01004 4 324 1.2E-193 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 323 7.2E-131 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 Gene3D G3DSA:3.20.20.70 1 325 1.3E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0252 663f47451e815349117d47fd130cfc92 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 152 171 1.8E-52 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 1.8E-52 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 190 209 1.8E-52 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 243 259 1.8E-52 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 268 283 1.8E-52 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 298 317 1.8E-52 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 243 255 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_0252 663f47451e815349117d47fd130cfc92 325 SUPERFAMILY SSF51569 4 324 7.03E-123 T 14-10-2018 Afer_0252 663f47451e815349117d47fd130cfc92 325 PIRSF PIRSF001415 1 325 1.1E-133 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 19 124 7.1E-22 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 145 682 3.0E-161 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 SUPERFAMILY SSF54665 3 139 3.4E-36 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 SMART SM01008 18 128 7.0E-35 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 Gene3D G3DSA:3.30.365.10 447 597 9.0E-131 T 14-10-2018 Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 SUPERFAMILY SSF56003 121 745 1.7E-177 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 Gene3D G3DSA:3.30.365.10 148 349 1.8E-57 T 14-10-2018 Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 Gene3D G3DSA:3.90.1170.50 1 127 2.2E-36 T 14-10-2018 Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 Gene3D G3DSA:3.30.365.10 179 274 1.8E-57 T 14-10-2018 Afer_1585 b04f9ff5f69f37eee45105fc445e9345 762 Gene3D G3DSA:3.30.365.10 358 722 9.0E-131 T 14-10-2018 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 Hamap MF_00258 Glutamate racemase [murI]. 8 256 34.051 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 75 83 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 SUPERFAMILY SSF53681 9 109 7.85E-30 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 Gene3D G3DSA:3.40.50.1860 100 208 7.4E-76 T 14-10-2018 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 SUPERFAMILY SSF53681 114 261 2.45E-32 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 213 1.8E-30 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 TIGRFAM TIGR00067 glut_race: glutamate racemase 10 247 6.3E-61 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1752 3323313060de5ddce1baab2591c69b6a 276 Gene3D G3DSA:3.40.50.1860 9 252 7.4E-76 T 14-10-2018 Afer_1166 f9b29ce62565903364395fbebc037143 99 Gene3D G3DSA:3.40.1620.10 5 47 3.7E-15 T 14-10-2018 Afer_1166 f9b29ce62565903364395fbebc037143 99 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 9 81 3.4E-21 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Afer_1166 f9b29ce62565903364395fbebc037143 99 Gene3D G3DSA:1.10.1220.170 49 99 2.5E-7 T 14-10-2018 Afer_1166 f9b29ce62565903364395fbebc037143 99 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 62 8.8E-17 T 14-10-2018 Afer_1166 f9b29ce62565903364395fbebc037143 99 SUPERFAMILY SSF143120 9 88 3.92E-22 T 14-10-2018 IPR036165 YefM-like superfamily Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 Gene3D G3DSA:3.40.30.120 388 516 2.8E-5 T 14-10-2018 Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 4.1E-29 T 14-10-2018 Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.1E-29 T 14-10-2018 Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 4.1E-29 T 14-10-2018 Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 4.1E-29 T 14-10-2018 Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 328 344 4.1E-29 T 14-10-2018 Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 Gene3D G3DSA:3.30.70.2450 181 266 1.7E-73 T 14-10-2018 Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 Pfam PF01494 FAD binding domain 6 341 7.8E-47 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 SUPERFAMILY SSF51905 6 366 4.96E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0814 a93323f0e9b3f87b731182823f23b1ee 525 Gene3D G3DSA:3.50.50.60 7 341 1.7E-73 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1125 919d034555a7c5c4c39906cd124deb57 164 Pfam PF13240 zinc-ribbon domain 14 34 4.4E-7 T 14-10-2018 IPR026870 Zinc-ribbon domain Reactome: R-HSA-202670 Afer_1125 919d034555a7c5c4c39906cd124deb57 164 SUPERFAMILY SSF49879 60 161 5.55E-33 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Afer_1125 919d034555a7c5c4c39906cd124deb57 164 Pfam PF16697 Inner membrane component of T3SS, cytoplasmic domain 74 159 2.4E-21 T 14-10-2018 IPR032030 YscD, cytoplasmic domain Afer_1125 919d034555a7c5c4c39906cd124deb57 164 SMART SM00240 88 138 4.3E-16 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Afer_1125 919d034555a7c5c4c39906cd124deb57 164 Gene3D G3DSA:2.60.200.20 48 162 1.3E-35 T 14-10-2018 Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 Pfam PF00571 CBS domain 351 396 2.0E-5 T 14-10-2018 IPR000644 CBS domain Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 Pfam PF00571 CBS domain 282 339 0.0035 T 14-10-2018 IPR000644 CBS domain Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 Pfam PF03448 MgtE intracellular N domain 176 278 9.3E-19 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 SUPERFAMILY SSF54631 281 396 3.41E-24 T 14-10-2018 Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 SUPERFAMILY SSF158791 158 277 7.46E-20 T 14-10-2018 Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 Gene3D G3DSA:1.25.60.10 165 276 6.7E-16 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 SMART SM00924 176 281 2.9E-18 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 SMART SM00116 352 400 1.4E-5 T 14-10-2018 IPR000644 CBS domain Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 SMART SM00116 288 341 9.6 T 14-10-2018 IPR000644 CBS domain Afer_0475 b0c6150d0392a8112713aaca00dc1489 413 Gene3D G3DSA:3.10.580.10 277 401 3.8E-31 T 14-10-2018 Afer_1781 e43c780a0593f6d3d454a858904b34b9 423 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 420 35.274 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_1781 e43c780a0593f6d3d454a858904b34b9 423 Gene3D G3DSA:3.65.10.10 9 417 3.8E-137 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Afer_1781 e43c780a0593f6d3d454a858904b34b9 423 Gene3D G3DSA:3.65.10.10 21 232 3.8E-137 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Afer_1781 e43c780a0593f6d3d454a858904b34b9 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 6.5E-69 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Afer_1781 e43c780a0593f6d3d454a858904b34b9 423 SUPERFAMILY SSF55205 1 419 3.76E-105 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Afer_1781 e43c780a0593f6d3d454a858904b34b9 423 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 418 6.2E-133 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_0422 100c6d275bed7c351531070fc5c6773f 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 9.0E-8 T 14-10-2018 Afer_0422 100c6d275bed7c351531070fc5c6773f 37 SUPERFAMILY SSF57840 2 37 1.44E-16 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0422 100c6d275bed7c351531070fc5c6773f 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0422 100c6d275bed7c351531070fc5c6773f 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 2 37 9.4E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0422 100c6d275bed7c351531070fc5c6773f 37 Pfam PF00444 Ribosomal protein L36 2 37 6.8E-20 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0422 100c6d275bed7c351531070fc5c6773f 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.419 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1366 9b182dba5e8698217092af40c975d00a 113 Gene3D G3DSA:3.40.1260.10 2 111 3.1E-8 T 14-10-2018 IPR027396 DsrEFH-like Afer_1366 9b182dba5e8698217092af40c975d00a 113 SUPERFAMILY SSF75169 1 106 5.89E-10 T 14-10-2018 IPR027396 DsrEFH-like Afer_1366 9b182dba5e8698217092af40c975d00a 113 Pfam PF02635 DsrE/DsrF-like family 3 111 1.2E-6 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Afer_1519 80b060e18701b8fdc7139c64597be649 338 SUPERFAMILY SSF53800 4 302 2.13E-57 T 14-10-2018 Afer_1519 80b060e18701b8fdc7139c64597be649 338 Gene3D G3DSA:3.40.50.1400 7 289 8.1E-87 T 14-10-2018 Afer_1519 80b060e18701b8fdc7139c64597be649 338 Pfam PF00762 Ferrochelatase 5 298 2.0E-64 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Afer_1519 80b060e18701b8fdc7139c64597be649 338 Hamap MF_00323 Ferrochelatase [hemH]. 3 303 23.297 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 Afer_1519 80b060e18701b8fdc7139c64597be649 338 Gene3D G3DSA:3.40.50.1400 142 284 8.1E-87 T 14-10-2018 Afer_1928 bd563f839a9bdae27180c61e5f2d9e5d 265 Gene3D G3DSA:3.40.830.10 1 247 9.3E-78 T 14-10-2018 Afer_1928 bd563f839a9bdae27180c61e5f2d9e5d 265 SUPERFAMILY SSF53213 1 243 1.31E-81 T 14-10-2018 Afer_1928 bd563f839a9bdae27180c61e5f2d9e5d 265 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 28 233 1.1E-39 T 14-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 Afer_1928 bd563f839a9bdae27180c61e5f2d9e5d 265 PIRSF PIRSF006157 1 252 1.6E-81 T 14-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 Afer_0091 92a349029fb7c0ff5da215bc6e052971 170 SMART SM00240 96 147 1.8E-13 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Afer_0091 92a349029fb7c0ff5da215bc6e052971 170 Pfam PF00498 FHA domain 98 162 3.3E-18 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Afer_0091 92a349029fb7c0ff5da215bc6e052971 170 SUPERFAMILY SSF49879 49 169 1.87E-27 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Afer_0091 92a349029fb7c0ff5da215bc6e052971 170 Gene3D G3DSA:2.60.200.20 49 170 1.6E-29 T 14-10-2018 Afer_1415 f1f559b48108716b9e1ed1c30c3bcd4e 399 SUPERFAMILY SSF51556 65 362 3.29E-55 T 14-10-2018 IPR032466 Metal-dependent hydrolase Afer_1415 f1f559b48108716b9e1ed1c30c3bcd4e 399 Gene3D G3DSA:2.30.40.10 29 386 1.1E-93 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_1415 f1f559b48108716b9e1ed1c30c3bcd4e 399 SUPERFAMILY SSF51338 6 384 4.56E-15 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_1415 f1f559b48108716b9e1ed1c30c3bcd4e 399 Pfam PF01979 Amidohydrolase family 62 376 2.7E-14 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Afer_1415 f1f559b48108716b9e1ed1c30c3bcd4e 399 Gene3D G3DSA:3.20.20.140 66 363 1.1E-93 T 14-10-2018 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 Gene3D G3DSA:3.40.50.1480 5 413 4.5E-170 T 14-10-2018 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 SUPERFAMILY SSF51735 185 353 1.58E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 Gene3D G3DSA:3.40.50.720 187 352 4.5E-170 T 14-10-2018 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 2 135 1.3E-34 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 Pfam PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 185 351 8.0E-54 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 SUPERFAMILY SSF52283 2 424 1.98E-93 T 14-10-2018 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 Hamap MF_00563 Adenosylhomocysteinase [ahcY]. 1 424 47.434 T 14-10-2018 IPR034373 Adenosylhomocysteinase GO:0004013|GO:0019510|GO:0051287 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-2408508|Reactome: R-HSA-5578997 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 ProSitePatterns PS00738 S-adenosyl-L-homocysteine hydrolase signature 1. 74 88 - T 14-10-2018 IPR020082 S-adenosyl-L-homocysteine hydrolase, conserved site GO:0004013 KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 SMART SM00997 185 352 1.0E-96 T 14-10-2018 IPR015878 S-adenosyl-L-homocysteine hydrolase, NAD binding domain KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 TIGRFAM TIGR00936 ahcY: adenosylhomocysteinase 3 424 2.8E-186 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 SMART SM00996 2 425 7.8E-141 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 PIRSF PIRSF001109 1 425 1.5E-179 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Afer_1765 f848aebe2c0597c07c041d2123e6fe1c 425 Pfam PF05221 S-adenosyl-L-homocysteine hydrolase 140 418 3.0E-23 T 14-10-2018 IPR000043 Adenosylhomocysteinase-like KEGG: 00270+3.3.1.1|MetaCyc: PWY-5041 Afer_0370 ddbfc8dacb3778c72a0440d8f65434dd 420 Pfam PF00146 NADH dehydrogenase 22 344 2.2E-120 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0370 ddbfc8dacb3778c72a0440d8f65434dd 420 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 61 76 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0370 ddbfc8dacb3778c72a0440d8f65434dd 420 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 15 351 24.249 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0370 ddbfc8dacb3778c72a0440d8f65434dd 420 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 233 246 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 ProSitePatterns PS00449 ATP synthase a subunit signature. 179 188 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 Gene3D G3DSA:1.20.120.220 85 254 4.1E-32 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 PRINTS PR00123 ATP synthase A subunit signature 176 198 2.9E-17 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 PRINTS PR00123 ATP synthase A subunit signature 235 250 2.9E-17 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 PRINTS PR00123 ATP synthase A subunit signature 91 107 2.9E-17 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 Pfam PF00119 ATP synthase A chain 35 248 1.4E-51 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 SUPERFAMILY SSF81336 84 249 2.22E-37 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 Hamap MF_01393 ATP synthase subunit a [atpB]. 6 255 14.112 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1801 6b121721c2dd156ce51cd7366bcf13e0 257 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 26 251 2.5E-41 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 SMART SM00382 44 160 5.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 SUPERFAMILY SSF52540 11 222 9.19E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 Pfam PF12002 MgsA AAA+ ATPase C terminal 250 359 1.1E-38 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 367 370 1.8E-5 T 14-10-2018 Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 52 71 1.8E-5 T 14-10-2018 Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 48 156 2.5E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 Gene3D G3DSA:1.20.272.10 226 326 1.1E-37 T 14-10-2018 Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 Gene3D G3DSA:3.40.50.300 3 159 1.2E-36 T 14-10-2018 Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 Pfam PF16193 AAA C-terminal domain 180 248 1.3E-13 T 14-10-2018 IPR032423 AAA C-terminal domain Afer_0533 00db843dd1cb1dc9035db93b3536642c 370 SUPERFAMILY SSF48019 235 365 4.36E-45 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Afer_0942 735d1827c03179db12106865a2a6e5db 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Afer_0942 735d1827c03179db12106865a2a6e5db 495 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 5 479 1.8E-200 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 Afer_0942 735d1827c03179db12106865a2a6e5db 495 Pfam PF00171 Aldehyde dehydrogenase family 20 475 1.9E-132 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Afer_0942 735d1827c03179db12106865a2a6e5db 495 SUPERFAMILY SSF53720 2 481 2.23E-140 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Afer_0942 735d1827c03179db12106865a2a6e5db 495 Gene3D G3DSA:3.40.309.10 249 448 5.3E-144 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Afer_0942 735d1827c03179db12106865a2a6e5db 495 Gene3D G3DSA:3.40.605.10 23 456 5.3E-144 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Afer_0098 ffab30f77c36994edc408f56b5fe2dfd 237 Pfam PF00731 AIR carboxylase 105 232 6.0E-12 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Afer_0098 ffab30f77c36994edc408f56b5fe2dfd 237 SMART SM01001 103 235 8.5E-11 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 Afer_0098 ffab30f77c36994edc408f56b5fe2dfd 237 Gene3D G3DSA:3.40.50.7700 104 237 3.5E-25 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Afer_0098 ffab30f77c36994edc408f56b5fe2dfd 237 SUPERFAMILY SSF52255 104 233 6.93E-20 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 Afer_1424 305a9afb5bdfc1197acb1ef39897769f 522 Gene3D G3DSA:3.40.50.11780 226 371 2.1E-8 T 14-10-2018 Afer_1424 305a9afb5bdfc1197acb1ef39897769f 522 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 244 408 2.3E-27 T 14-10-2018 IPR035089 Tail sheath protein, subtilisin-like domain Afer_1424 305a9afb5bdfc1197acb1ef39897769f 522 Pfam PF17482 Phage tail sheath C-terminal domain 409 515 1.3E-16 T 14-10-2018 IPR020287 Tail sheath protein, C-terminal domain Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 Gene3D G3DSA:3.30.2350.10 78 300 6.0E-63 T 14-10-2018 Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 Pfam PF01479 S4 domain 15 59 1.4E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 SUPERFAMILY SSF55120 79 296 2.24E-63 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 294 6.4E-63 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 SUPERFAMILY SSF55174 12 106 2.62E-9 T 14-10-2018 Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 Pfam PF00849 RNA pseudouridylate synthase 87 241 1.0E-29 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 Gene3D G3DSA:3.10.290.10 3 67 2.5E-9 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Afer_1209 fc7e6192a501ee3c9f65cd316df1eacb 309 SMART SM00363 15 74 0.0019 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0815 22aca1489cfb684d4a3fb06b5c325264 483 Gene3D G3DSA:3.40.50.880 248 445 2.7E-21 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0815 22aca1489cfb684d4a3fb06b5c325264 483 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 483 153.685 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Afer_0815 22aca1489cfb684d4a3fb06b5c325264 483 SUPERFAMILY SSF52540 4 236 3.14E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0815 22aca1489cfb684d4a3fb06b5c325264 483 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 476 5.2E-120 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 Afer_0815 22aca1489cfb684d4a3fb06b5c325264 483 SUPERFAMILY SSF52317 254 437 5.14E-31 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0815 22aca1489cfb684d4a3fb06b5c325264 483 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 252 430 7.8E-36 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Afer_0815 22aca1489cfb684d4a3fb06b5c325264 483 Gene3D G3DSA:3.40.50.300 4 234 1.1E-41 T 14-10-2018 Afer_0815 22aca1489cfb684d4a3fb06b5c325264 483 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 228 2.6E-17 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Afer_0471 d58515adca944d277f214de457748aed 362 Gene3D G3DSA:1.10.600.10 12 362 2.8E-91 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Afer_0471 d58515adca944d277f214de457748aed 362 Pfam PF00348 Polyprenyl synthetase 57 297 5.2E-44 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Afer_0471 d58515adca944d277f214de457748aed 362 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 240 252 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Afer_0471 d58515adca944d277f214de457748aed 362 SUPERFAMILY SSF48576 39 361 1.15E-65 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Afer_0471 d58515adca944d277f214de457748aed 362 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 102 116 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Afer_0588 67f59b726b41a5e60ccc03db04985636 515 Gene3D G3DSA:3.40.50.12780 1 407 2.2E-101 T 14-10-2018 Afer_0588 67f59b726b41a5e60ccc03db04985636 515 Pfam PF13193 AMP-binding enzyme C-terminal domain 421 496 5.5E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_0588 67f59b726b41a5e60ccc03db04985636 515 Pfam PF00501 AMP-binding enzyme 12 412 3.2E-86 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_0588 67f59b726b41a5e60ccc03db04985636 515 SUPERFAMILY SSF56801 4 512 6.41E-140 T 14-10-2018 Afer_0588 67f59b726b41a5e60ccc03db04985636 515 ProSitePatterns PS00455 Putative AMP-binding domain signature. 164 175 - T 14-10-2018 IPR020845 AMP-binding, conserved site Afer_0588 67f59b726b41a5e60ccc03db04985636 515 Gene3D G3DSA:3.30.300.310 408 510 2.0E-38 T 14-10-2018 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 36 472 1.1E-145 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 SMART SM00434 15 469 8.7E-241 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 509 553 1.5E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 665 704 1.3E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 560 605 6.0E-6 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 615 658 7.6E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 759 3.4E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 763 810 1.6E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Gene3D G3DSA:2.120.10.90 501 810 8.0E-105 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Gene3D G3DSA:3.30.1360.40 241 336 8.9E-189 T 14-10-2018 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 15 809 0.0 T 14-10-2018 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 SUPERFAMILY SSF101904 503 812 4.97E-91 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Gene3D G3DSA:3.90.199.10 36 490 8.9E-189 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 SUPERFAMILY SSF56719 35 490 5.23E-160 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Afer_0006 bf7319a6ff397dd7914eccbaaa6a724c 816 Gene3D G3DSA:1.10.268.10 373 462 8.9E-189 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 Afer_0556 11de37120d80c3ec0e8958458987a4f0 175 Pfam PF08044 Domain of unknown function (DUF1707) 8 58 2.0E-15 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 Afer_1447 1ae7548cd844b8022508a74ffd2eca07 147 SUPERFAMILY SSF52402 10 145 1.51E-36 T 14-10-2018 Afer_1447 1ae7548cd844b8022508a74ffd2eca07 147 Gene3D G3DSA:3.40.50.620 4 147 2.6E-46 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1447 1ae7548cd844b8022508a74ffd2eca07 147 Pfam PF00582 Universal stress protein family 10 144 3.2E-31 T 14-10-2018 IPR006016 UspA Afer_1447 1ae7548cd844b8022508a74ffd2eca07 147 PRINTS PR01438 Universal stress protein signature 9 27 4.7E-19 T 14-10-2018 IPR006015 Universal stress protein A Afer_1447 1ae7548cd844b8022508a74ffd2eca07 147 PRINTS PR01438 Universal stress protein signature 104 116 4.7E-19 T 14-10-2018 IPR006015 Universal stress protein A Afer_1447 1ae7548cd844b8022508a74ffd2eca07 147 PRINTS PR01438 Universal stress protein signature 122 144 4.7E-19 T 14-10-2018 IPR006015 Universal stress protein A Afer_0685 cad9b8ff4c600ce8ed3c2bfeb7b70427 147 Gene3D G3DSA:1.20.120.1630 7 146 2.3E-21 T 14-10-2018 Afer_0685 cad9b8ff4c600ce8ed3c2bfeb7b70427 147 Pfam PF04191 Phospholipid methyltransferase 32 132 1.2E-13 T 14-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 Afer_0685 cad9b8ff4c600ce8ed3c2bfeb7b70427 147 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 106 144 8.0E-5 T 14-10-2018 Afer_0459 0ad3e9bafdc5f8667d5093adf58e4fcc 387 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 4 366 4.9E-166 T 14-10-2018 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 Afer_0459 0ad3e9bafdc5f8667d5093adf58e4fcc 387 Gene3D G3DSA:3.20.20.70 15 367 1.4E-92 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0459 0ad3e9bafdc5f8667d5093adf58e4fcc 387 SMART SM01240 14 377 3.2E-60 T 14-10-2018 Afer_0459 0ad3e9bafdc5f8667d5093adf58e4fcc 387 SUPERFAMILY SSF51412 12 367 3.21E-70 T 14-10-2018 Afer_0459 0ad3e9bafdc5f8667d5093adf58e4fcc 387 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 16 365 1.7E-48 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Afer_0136 ad3ae4c8453d4cb1198518a62d622d1e 98 Pfam PF02049 Flagellar hook-basal body complex protein FliE 15 97 4.2E-16 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 Afer_0853 bf592638f899c447a1f73725bae0ab9e 231 Gene3D G3DSA:3.30.450.20 99 212 4.7E-13 T 14-10-2018 Afer_0853 bf592638f899c447a1f73725bae0ab9e 231 Pfam PF08448 PAS fold 111 217 1.1E-11 T 14-10-2018 IPR013656 PAS fold-4 Afer_0853 bf592638f899c447a1f73725bae0ab9e 231 SUPERFAMILY SSF55785 104 212 5.15E-16 T 14-10-2018 IPR035965 PAS domain superfamily Afer_0853 bf592638f899c447a1f73725bae0ab9e 231 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 105 212 1.3E-9 T 14-10-2018 IPR000014 PAS domain Afer_0853 bf592638f899c447a1f73725bae0ab9e 231 SMART SM00091 2 66 35.0 T 14-10-2018 IPR000014 PAS domain Afer_0853 bf592638f899c447a1f73725bae0ab9e 231 SMART SM00091 104 170 5.2E-5 T 14-10-2018 IPR000014 PAS domain Afer_0371 49c7bc0cc6fc9c0e190611b737d1fa02 229 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 100 111 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_0371 49c7bc0cc6fc9c0e190611b737d1fa02 229 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 11 138 1.5E-40 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0371 49c7bc0cc6fc9c0e190611b737d1fa02 229 Pfam PF12838 4Fe-4S dicluster domain 54 114 6.0E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_0371 49c7bc0cc6fc9c0e190611b737d1fa02 229 SUPERFAMILY SSF54862 28 140 6.7E-25 T 14-10-2018 Afer_0371 49c7bc0cc6fc9c0e190611b737d1fa02 229 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 2 142 26.997 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0371 49c7bc0cc6fc9c0e190611b737d1fa02 229 Gene3D G3DSA:3.30.70.3270 28 176 5.5E-45 T 14-10-2018 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 4.1E-21 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 SUPERFAMILY SSF46589 1 113 1.31E-21 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 PRINTS PR00981 Seryl-tRNA synthetase signature 274 286 6.3E-23 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 PRINTS PR00981 Seryl-tRNA synthetase signature 286 299 6.3E-23 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 PRINTS PR00981 Seryl-tRNA synthetase signature 361 377 6.3E-23 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 PRINTS PR00981 Seryl-tRNA synthetase signature 326 339 6.3E-23 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 PRINTS PR00981 Seryl-tRNA synthetase signature 343 359 6.3E-23 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 SUPERFAMILY SSF55681 146 428 1.29E-79 T 14-10-2018 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 233 409 3.4E-26 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 PIRSF PIRSF001529 1 436 1.9E-132 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 Gene3D G3DSA:1.10.287.40 1 105 4.0E-18 T 14-10-2018 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 Gene3D G3DSA:3.30.930.10 106 436 7.0E-104 T 14-10-2018 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 427 3.2E-126 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Afer_0190 aed620c5b6c69c2677eac448600c138a 438 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 432 36.902 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 Afer_2031 aa7f97330aedf99c3e80411a6eac8943 253 PIRSF PIRSF009320 90 252 3.7E-8 T 14-10-2018 Afer_2031 aa7f97330aedf99c3e80411a6eac8943 253 PIRSF PIRSF009320 2 77 1.2E-17 T 14-10-2018 Afer_2031 aa7f97330aedf99c3e80411a6eac8943 253 Gene3D G3DSA:3.40.50.300 1 252 3.3E-84 T 14-10-2018 Afer_2031 aa7f97330aedf99c3e80411a6eac8943 253 Pfam PF13614 AAA domain 2 177 3.9E-66 T 14-10-2018 IPR025669 AAA domain Afer_2031 aa7f97330aedf99c3e80411a6eac8943 253 SUPERFAMILY SSF52540 1 250 1.57E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0665 c75951074257f00efd0675c1481f5c18 333 Gene3D G3DSA:3.40.190.10 147 332 9.0E-18 T 14-10-2018 Afer_0665 c75951074257f00efd0675c1481f5c18 333 Pfam PF09084 NMT1/THI5 like 51 255 4.0E-20 T 14-10-2018 IPR015168 SsuA/THI5-like Afer_0665 c75951074257f00efd0675c1481f5c18 333 SUPERFAMILY SSF53850 38 264 3.16E-26 T 14-10-2018 Afer_0665 c75951074257f00efd0675c1481f5c18 333 Gene3D G3DSA:3.40.190.10 34 136 5.1E-12 T 14-10-2018 Afer_0206 64fe897d9a94e4a06265c8d50c89536b 386 Gene3D G3DSA:3.40.50.300 238 361 1.9E-13 T 14-10-2018 Afer_0206 64fe897d9a94e4a06265c8d50c89536b 386 Gene3D G3DSA:3.40.50.300 64 128 5.1E-6 T 14-10-2018 Afer_0206 64fe897d9a94e4a06265c8d50c89536b 386 SUPERFAMILY SSF52540 33 349 5.6E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0206 64fe897d9a94e4a06265c8d50c89536b 386 Pfam PF12696 TraM recognition site of TraD and TraG 286 352 6.4E-10 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site Afer_0206 64fe897d9a94e4a06265c8d50c89536b 386 Pfam PF02534 Type IV secretory system Conjugative DNA transfer 64 191 1.2E-5 T 14-10-2018 IPR003688 Type IV secretion system protein TraG/VirD4 GO:0009291|GO:0016020 Afer_0206 64fe897d9a94e4a06265c8d50c89536b 386 Gene3D G3DSA:1.10.8.80 129 215 5.1E-6 T 14-10-2018 Afer_1728 d13806570f43c2888bcdad6b728d56d2 142 Pfam PF07977 FabA-like domain 10 132 1.2E-20 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Afer_1728 d13806570f43c2888bcdad6b728d56d2 142 Gene3D G3DSA:3.10.129.10 3 140 1.4E-42 T 14-10-2018 Afer_1728 d13806570f43c2888bcdad6b728d56d2 142 SUPERFAMILY SSF54637 8 140 3.93E-36 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_0470 acacc51e988f315c07fb077b2b1de1b9 496 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 4 489 5.0E-113 T 14-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 Afer_0470 acacc51e988f315c07fb077b2b1de1b9 496 SUPERFAMILY SSF51905 2 488 9.39E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0470 acacc51e988f315c07fb077b2b1de1b9 496 PRINTS PR00419 Adrenodoxin reductase family signature 26 39 2.6E-5 T 14-10-2018 Afer_0470 acacc51e988f315c07fb077b2b1de1b9 496 PRINTS PR00419 Adrenodoxin reductase family signature 3 25 2.6E-5 T 14-10-2018 Afer_0470 acacc51e988f315c07fb077b2b1de1b9 496 Pfam PF01593 Flavin containing amine oxidoreductase 11 486 4.2E-33 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Afer_0470 acacc51e988f315c07fb077b2b1de1b9 496 Gene3D G3DSA:3.50.50.60 211 306 8.7E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0470 acacc51e988f315c07fb077b2b1de1b9 496 Gene3D G3DSA:3.50.50.60 1 89 2.0E-23 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 67 116 8.9E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 Gene3D G3DSA:2.20.25.90 59 123 1.3E-15 T 14-10-2018 Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 Gene3D G3DSA:3.40.50.740 124 578 6.5E-63 T 14-10-2018 Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 Pfam PF00384 Molybdopterin oxidoreductase 123 527 5.9E-24 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 SUPERFAMILY SSF50692 750 932 1.41E-30 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 Gene3D G3DSA:3.40.228.10 206 416 6.5E-63 T 14-10-2018 Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 Pfam PF01568 Molydopterin dinucleotide binding domain 751 828 4.9E-19 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 Gene3D G3DSA:2.40.40.20 727 868 2.8E-28 T 14-10-2018 Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 SUPERFAMILY SSF53706 66 725 9.42E-114 T 14-10-2018 Afer_1020 03649ae3f7a7c71d88de1e7a42ed8219 977 SMART SM00926 64 120 1.9E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_1195 d0b68a1652d7e4fed3711a3094fb9213 289 SUPERFAMILY SSF53474 43 261 6.84E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1195 d0b68a1652d7e4fed3711a3094fb9213 289 Gene3D G3DSA:3.40.50.1820 6 275 2.1E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0355 96a750be83f674373059e6b57fa692b0 138 SUPERFAMILY SSF109770 22 138 3.92E-47 T 14-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 Afer_0355 96a750be83f674373059e6b57fa692b0 138 TIGRFAM TIGR02753 sodN: superoxide dismutase, Ni 3 138 3.4E-47 T 14-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 Afer_0355 96a750be83f674373059e6b57fa692b0 138 Gene3D G3DSA:1.20.120.400 22 138 7.9E-46 T 14-10-2018 IPR036502 Nickel-containing superoxide dismutase superfamily MetaCyc: PWY-6854 Afer_0355 96a750be83f674373059e6b57fa692b0 138 Pfam PF09055 Nickel-containing superoxide dismutase 19 136 1.5E-43 T 14-10-2018 IPR014123 Superoxide dismutase, Nickel-type GO:0004784|GO:0016151|GO:0016209 MetaCyc: PWY-6854 Afer_1372 876481db3071a9eef38d146bee7302f3 210 Gene3D G3DSA:1.10.357.10 56 194 6.0E-27 T 14-10-2018 Afer_1372 876481db3071a9eef38d146bee7302f3 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Afer_1372 876481db3071a9eef38d146bee7302f3 210 SUPERFAMILY SSF48498 80 191 2.61E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Afer_1372 876481db3071a9eef38d146bee7302f3 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1372 876481db3071a9eef38d146bee7302f3 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.2E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1372 876481db3071a9eef38d146bee7302f3 210 SUPERFAMILY SSF46689 5 83 1.55E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1372 876481db3071a9eef38d146bee7302f3 210 Gene3D G3DSA:1.10.10.60 3 55 3.1E-18 T 14-10-2018 Afer_1372 876481db3071a9eef38d146bee7302f3 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 8.3E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_0749 1f4c8409a4679a7485784c4c733b9ae3 221 Gene3D G3DSA:3.40.430.10 143 210 4.0E-12 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Afer_0749 1f4c8409a4679a7485784c4c733b9ae3 221 Gene3D G3DSA:3.40.430.10 15 130 1.0E-17 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Afer_0749 1f4c8409a4679a7485784c4c733b9ae3 221 Pfam PF01872 RibD C-terminal domain 144 183 1.7E-8 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Afer_0749 1f4c8409a4679a7485784c4c733b9ae3 221 Pfam PF01872 RibD C-terminal domain 27 79 1.0E-6 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Afer_0749 1f4c8409a4679a7485784c4c733b9ae3 221 SUPERFAMILY SSF53597 25 202 1.81E-20 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 Gene3D G3DSA:3.40.430.10 240 328 1.5E-15 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 Gene3D G3DSA:3.40.430.10 137 239 1.3E-27 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 PIRSF PIRSF006769 240 328 3.4E-12 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 PIRSF PIRSF006769 3 249 1.6E-84 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 225 1.9E-69 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 48 86 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 Pfam PF01872 RibD C-terminal domain 147 298 9.0E-35 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 SUPERFAMILY SSF53597 145 324 7.07E-41 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 SUPERFAMILY SSF53927 5 124 2.51E-35 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 Gene3D G3DSA:3.40.140.10 4 129 1.2E-32 T 14-10-2018 Afer_1685 c6f2943aed2c1fbf8dd2d574911784fc 350 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 96 7.7E-13 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain Afer_1568 ca2821f0eeca4bddb4695fbcb088957a 269 Gene3D G3DSA:3.30.390.50 174 269 1.6E-21 T 14-10-2018 Afer_1568 ca2821f0eeca4bddb4695fbcb088957a 269 SUPERFAMILY SSF56176 1 173 1.51E-54 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_1568 ca2821f0eeca4bddb4695fbcb088957a 269 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 173 7.0E-51 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 Afer_1568 ca2821f0eeca4bddb4695fbcb088957a 269 Gene3D G3DSA:3.30.465.10 57 173 8.9E-40 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Afer_1568 ca2821f0eeca4bddb4695fbcb088957a 269 SMART SM01092 177 268 2.8E-25 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Afer_1568 ca2821f0eeca4bddb4695fbcb088957a 269 SUPERFAMILY SSF55447 177 268 2.35E-21 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily Afer_1568 ca2821f0eeca4bddb4695fbcb088957a 269 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 178 267 2.7E-15 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal Afer_1568 ca2821f0eeca4bddb4695fbcb088957a 269 Gene3D G3DSA:3.30.43.10 1 53 7.9E-24 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 SUPERFAMILY SSF50249 133 189 9.25E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 SUPERFAMILY SSF50249 69 130 9.0E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 SMART SM01185 71 125 4.9E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 Hamap MF_00141 Elongation factor P [efp]. 4 189 46.414 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 TIGRFAM TIGR00038 efp: translation elongation factor P 6 189 1.2E-72 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 SUPERFAMILY SSF50104 6 67 8.42E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 PIRSF PIRSF005901 3 189 5.4E-66 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 125 5.2E-18 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 Pfam PF09285 Elongation factor P, C-terminal 133 188 1.9E-26 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 Gene3D G3DSA:2.30.30.30 5 66 1.5E-25 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 SMART SM00841 133 188 1.2E-32 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 6 63 3.0E-24 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 Gene3D G3DSA:2.40.50.140 132 189 8.8E-27 T 14-10-2018 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 Gene3D G3DSA:2.40.50.140 68 131 1.1E-20 T 14-10-2018 Afer_1713 d4f8e7c8e7c734538f56729699bd1dfa 189 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site Afer_1443 799898c747bcd48fdfbcd8d2708350f4 314 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 8.2E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Afer_1443 799898c747bcd48fdfbcd8d2708350f4 314 SUPERFAMILY SSF46785 1 109 1.39E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1443 799898c747bcd48fdfbcd8d2708350f4 314 SUPERFAMILY SSF53850 85 288 6.37E-43 T 14-10-2018 Afer_1443 799898c747bcd48fdfbcd8d2708350f4 314 Gene3D G3DSA:3.40.190.290 89 295 2.2E-44 T 14-10-2018 Afer_1443 799898c747bcd48fdfbcd8d2708350f4 314 Pfam PF03466 LysR substrate binding domain 87 286 7.0E-45 T 14-10-2018 IPR005119 LysR, substrate-binding Afer_1443 799898c747bcd48fdfbcd8d2708350f4 314 Gene3D G3DSA:1.10.10.10 1 88 1.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0070 8eda2ba01d15efd4a15d32d3e6fc356a 431 SUPERFAMILY SSF53448 49 304 2.34E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0070 8eda2ba01d15efd4a15d32d3e6fc356a 431 Pfam PF13641 Glycosyltransferase like family 2 52 278 4.4E-42 T 14-10-2018 Afer_0070 8eda2ba01d15efd4a15d32d3e6fc356a 431 Gene3D G3DSA:3.90.550.10 45 260 7.8E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_2036 5abde0e0ce17d32f2563256ead898d8b 88 SMART SM01234 11 77 1.5E-30 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Afer_2036 5abde0e0ce17d32f2563256ead898d8b 88 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 18 84 1.3E-19 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Afer_2036 5abde0e0ce17d32f2563256ead898d8b 88 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 11 78 18.768 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Afer_2036 5abde0e0ce17d32f2563256ead898d8b 88 Pfam PF01809 Haemolytic domain 15 77 4.0E-24 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Afer_2036 5abde0e0ce17d32f2563256ead898d8b 88 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 30 77 1.0E-13 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor Afer_0122 c269683e07d8217088b030e41f2b50ea 529 TIGRFAM TIGR02701 shell_carb_anhy: carboxysome shell carbonic anhydrase 52 494 6.9E-191 T 14-10-2018 IPR014074 Carboxysome shell carbonic anhydrase Afer_0122 c269683e07d8217088b030e41f2b50ea 529 Pfam PF08936 Carboxysome Shell Carbonic Anhydrase 52 503 4.9E-200 T 14-10-2018 IPR014074 Carboxysome shell carbonic anhydrase Afer_0122 c269683e07d8217088b030e41f2b50ea 529 Gene3D G3DSA:1.20.120.1310 40 145 2.6E-27 T 14-10-2018 Afer_0122 c269683e07d8217088b030e41f2b50ea 529 Gene3D G3DSA:3.30.1330.140 390 506 7.0E-44 T 14-10-2018 Afer_1723 5e24282b1a36618c10d50998b62f2b69 204 Gene3D G3DSA:2.60.300.12 3 98 1.6E-5 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Afer_1723 5e24282b1a36618c10d50998b62f2b69 204 SUPERFAMILY SSF89360 4 97 1.29E-6 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Afer_1723 5e24282b1a36618c10d50998b62f2b69 204 Pfam PF01106 NifU-like domain 120 186 1.2E-18 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Afer_1723 5e24282b1a36618c10d50998b62f2b69 204 SUPERFAMILY SSF117916 114 192 8.5E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Afer_1723 5e24282b1a36618c10d50998b62f2b69 204 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 127 185 1.0E-9 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Afer_1723 5e24282b1a36618c10d50998b62f2b69 204 Gene3D G3DSA:3.30.300.130 114 200 2.0E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Afer_1912 789ea8841e10203627d2346b3e7db233 190 Pfam PF01227 GTP cyclohydrolase I 23 173 7.1E-45 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Afer_1912 789ea8841e10203627d2346b3e7db233 190 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 115 125 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 Afer_1912 789ea8841e10203627d2346b3e7db233 190 Gene3D G3DSA:3.30.1130.10 59 185 1.1E-37 T 14-10-2018 Afer_1912 789ea8841e10203627d2346b3e7db233 190 SUPERFAMILY SSF55620 9 182 7.41E-44 T 14-10-2018 Afer_0742 5021f2905fa3c8a6b32270565e4c7d52 367 Pfam PF13439 Glycosyltransferase Family 4 17 171 1.2E-12 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Afer_0742 5021f2905fa3c8a6b32270565e4c7d52 367 Gene3D G3DSA:3.40.50.2000 172 345 4.9E-54 T 14-10-2018 Afer_0742 5021f2905fa3c8a6b32270565e4c7d52 367 Pfam PF00534 Glycosyl transferases group 1 191 339 1.6E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_0742 5021f2905fa3c8a6b32270565e4c7d52 367 SUPERFAMILY SSF53756 15 364 5.83E-68 T 14-10-2018 Afer_0742 5021f2905fa3c8a6b32270565e4c7d52 367 Gene3D G3DSA:3.40.50.2000 4 361 4.9E-54 T 14-10-2018 Afer_1739 191de304acc626c64933643e291fa118 309 Pfam PF01040 UbiA prenyltransferase family 44 266 5.0E-21 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Afer_1739 191de304acc626c64933643e291fa118 309 Gene3D G3DSA:1.10.357.140 33 186 4.0E-8 T 14-10-2018 Afer_1119 10b17cbf12d81e8d92060d5cb7cae9f0 440 Pfam PF02347 Glycine cleavage system P-protein 3 432 1.5E-113 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Afer_1119 10b17cbf12d81e8d92060d5cb7cae9f0 440 Gene3D G3DSA:3.40.640.10 84 346 7.8E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1119 10b17cbf12d81e8d92060d5cb7cae9f0 440 SUPERFAMILY SSF53383 4 436 8.81E-103 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1119 10b17cbf12d81e8d92060d5cb7cae9f0 440 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 2 438 41.61 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Afer_1119 10b17cbf12d81e8d92060d5cb7cae9f0 440 PIRSF PIRSF006815 2 439 1.9E-154 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 Afer_1119 10b17cbf12d81e8d92060d5cb7cae9f0 440 Gene3D G3DSA:3.90.1150.10 73 434 7.8E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0701 714cedf852ad226738cc4441dd8c54b3 397 Pfam PF09992 Phosphodiester glycosidase 202 339 1.0E-8 T 14-10-2018 IPR018711 Phosphodiester glycosidase Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 SMART SM00267 363 535 6.0E-40 T 14-10-2018 IPR000160 GGDEF domain Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 Gene3D G3DSA:3.20.20.450 549 804 8.4E-72 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 Gene3D G3DSA:3.30.70.270 369 537 7.4E-45 T 14-10-2018 Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 SUPERFAMILY SSF46458 46 186 2.07E-17 T 14-10-2018 IPR009050 Globin-like superfamily Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 Pfam PF11563 Protoglobin 48 196 1.2E-19 T 14-10-2018 Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 372 533 4.2E-34 T 14-10-2018 IPR000160 GGDEF domain Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 Gene3D G3DSA:1.10.490.10 47 201 1.9E-23 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 SMART SM00052 545 790 2.2E-66 T 14-10-2018 IPR001633 EAL domain Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 SUPERFAMILY SSF141868 553 795 3.27E-64 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 530 1.2E-36 T 14-10-2018 IPR000160 GGDEF domain Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 SUPERFAMILY SSF55073 379 534 1.26E-38 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_1385 1a6c9be87c664f8515d1924828d98e3a 935 Pfam PF00563 EAL domain 553 785 1.2E-55 T 14-10-2018 IPR001633 EAL domain Afer_0661 3c2d0246f90b86bfbb75c65a49295b84 344 Pfam PF07687 Peptidase dimerisation domain 155 256 1.5E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Afer_0661 3c2d0246f90b86bfbb75c65a49295b84 344 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 3 343 1.6E-119 T 14-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 Afer_0661 3c2d0246f90b86bfbb75c65a49295b84 344 SUPERFAMILY SSF53187 5 342 1.86E-33 T 14-10-2018 Afer_0661 3c2d0246f90b86bfbb75c65a49295b84 344 SUPERFAMILY SSF55031 156 256 1.5E-15 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Afer_0661 3c2d0246f90b86bfbb75c65a49295b84 344 Pfam PF01546 Peptidase family M20/M25/M40 59 340 1.1E-15 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Afer_0661 3c2d0246f90b86bfbb75c65a49295b84 344 Gene3D G3DSA:3.30.70.360 156 269 1.8E-72 T 14-10-2018 Afer_0661 3c2d0246f90b86bfbb75c65a49295b84 344 Gene3D G3DSA:3.40.630.10 13 332 1.8E-72 T 14-10-2018 Afer_0501 467605af3e1fdf5158a1cdcf24bd12e1 157 Pfam PF10027 Predicted integral membrane protein (DUF2269) 60 154 5.7E-7 T 14-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 Gene3D G3DSA:1.10.287.130 253 322 4.7E-23 T 14-10-2018 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 SUPERFAMILY SSF158472 200 245 5.49E-7 T 14-10-2018 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 SMART SM00388 256 322 1.6E-20 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 SUPERFAMILY SSF47384 234 321 5.89E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 Pfam PF00512 His Kinase A (phospho-acceptor) domain 257 321 4.5E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 SMART SM00304 196 248 1.5E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 Gene3D G3DSA:1.20.1480.50 156 252 4.2E-6 T 14-10-2018 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 Gene3D G3DSA:3.30.565.10 323 509 3.4E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 SMART SM00387 364 509 2.9E-32 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 506 6.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 1.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 1.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 468 486 1.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 506 1.8E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 Pfam PF00672 HAMP domain 199 244 1.8E-10 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Afer_0557 47f6b5846872278d48e6f3060143e8c8 559 SUPERFAMILY SSF55874 311 508 2.26E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0305 cce1beaf489c24039786bd071dfb7239 404 SUPERFAMILY SSF47203 254 401 1.77E-54 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 Gene3D G3DSA:1.10.540.10 2 116 7.3E-21 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 126 223 6.4E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 115 1.6E-16 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 128 140 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 254 398 2.5E-49 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 357 376 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 Gene3D G3DSA:1.20.140.10 250 403 1.1E-55 T 14-10-2018 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 Gene3D G3DSA:2.40.110.10 125 238 7.3E-33 T 14-10-2018 Afer_0305 cce1beaf489c24039786bd071dfb7239 404 SUPERFAMILY SSF56645 5 234 1.14E-57 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Afer_1779 b93249823f2b8e992f1036416dfb93d1 257 Gene3D G3DSA:1.10.12.10 197 256 1.7E-12 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Afer_1779 b93249823f2b8e992f1036416dfb93d1 257 SUPERFAMILY SSF52096 3 250 1.25E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1779 b93249823f2b8e992f1036416dfb93d1 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 245 4.4E-59 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_1779 b93249823f2b8e992f1036416dfb93d1 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Afer_1779 b93249823f2b8e992f1036416dfb93d1 257 Gene3D G3DSA:3.90.226.10 1 196 7.4E-67 T 14-10-2018 Afer_1963 7f0a3cc5643997d54c728c032d2ee3c6 138 Gene3D G3DSA:1.10.1660.10 17 129 2.3E-25 T 14-10-2018 Afer_1963 7f0a3cc5643997d54c728c032d2ee3c6 138 ProSitePatterns PS00552 MerR-type HTH domain signature. 20 42 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_1963 7f0a3cc5643997d54c728c032d2ee3c6 138 SMART SM00422 17 85 8.8E-26 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_1963 7f0a3cc5643997d54c728c032d2ee3c6 138 SUPERFAMILY SSF46955 17 113 5.95E-22 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Afer_1963 7f0a3cc5643997d54c728c032d2ee3c6 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 52 72 7.1E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_1963 7f0a3cc5643997d54c728c032d2ee3c6 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 29 42 7.1E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_1963 7f0a3cc5643997d54c728c032d2ee3c6 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 18 29 7.1E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_1963 7f0a3cc5643997d54c728c032d2ee3c6 138 Pfam PF13411 MerR HTH family regulatory protein 17 83 2.2E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 Pfam PF00270 DEAD/DEAH box helicase 4 152 8.6E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 Gene3D G3DSA:3.40.50.300 1 174 2.1E-61 T 14-10-2018 Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 SMART SM01142 623 796 1.9E-36 T 14-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 Gene3D G3DSA:1.10.3380.30 420 783 3.2E-39 T 14-10-2018 Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 Gene3D G3DSA:3.40.50.300 175 414 7.8E-51 T 14-10-2018 Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 Pfam PF00271 Helicase conserved C-terminal domain 310 387 2.1E-5 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 SMART SM00487 1 179 4.7E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 Gene3D G3DSA:1.20.1500.20 449 601 3.2E-39 T 14-10-2018 Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 SMART SM00490 298 387 1.7E-10 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 SUPERFAMILY SSF52540 12 400 6.85E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0918 79e3ac21064589c8904e276fabff9c1b 815 Pfam PF08148 DSHCT (NUC185) domain 627 789 6.8E-25 T 14-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal Afer_1517 61a6907d16e03b3f05248fdaad2a9379 539 Pfam PF13684 Dihydroxyacetone kinase family 232 539 5.4E-90 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain Afer_1517 61a6907d16e03b3f05248fdaad2a9379 539 Pfam PF02734 DAK2 domain 39 190 3.6E-24 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Afer_1517 61a6907d16e03b3f05248fdaad2a9379 539 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 15 539 5.1E-135 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV Afer_1517 61a6907d16e03b3f05248fdaad2a9379 539 SUPERFAMILY SSF101473 13 193 1.02E-30 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Afer_1517 61a6907d16e03b3f05248fdaad2a9379 539 SMART SM01121 231 539 5.1E-102 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain Afer_1517 61a6907d16e03b3f05248fdaad2a9379 539 SMART SM01120 39 191 3.8E-34 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Afer_1717 f7326d158c14fbaad58d9a71da4d5817 354 PIRSF PIRSF001455 40 352 2.8E-86 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Afer_1717 f7326d158c14fbaad58d9a71da4d5817 354 SUPERFAMILY SSF56796 26 350 2.36E-83 T 14-10-2018 Afer_1717 f7326d158c14fbaad58d9a71da4d5817 354 Gene3D G3DSA:1.20.1090.10 180 351 9.8E-40 T 14-10-2018 Afer_1717 f7326d158c14fbaad58d9a71da4d5817 354 Gene3D G3DSA:3.40.50.1970 14 179 3.2E-49 T 14-10-2018 Afer_1717 f7326d158c14fbaad58d9a71da4d5817 354 Pfam PF01761 3-dehydroquinate synthase 74 320 6.6E-82 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 Gene3D G3DSA:3.40.1190.10 98 326 3.0E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 481 8.1E-139 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 Pfam PF08245 Mur ligase middle domain 107 307 5.2E-48 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 SUPERFAMILY SSF63418 2 98 1.1E-23 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 SUPERFAMILY SSF53623 98 322 1.44E-70 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 Gene3D G3DSA:3.90.190.20 333 487 2.0E-50 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 105 128 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 2 481 31.904 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 Gene3D G3DSA:3.40.1390.10 4 96 6.5E-23 T 14-10-2018 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 SUPERFAMILY SSF53244 327 482 2.22E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 Pfam PF01225 Mur ligase family, catalytic domain 26 91 7.9E-13 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Afer_1816 a9c0542227e878814ff3c5a2c7dc90f0 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 412 5.7E-20 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Afer_1219 5af0e01d273443246b2a175b4116adf2 250 SUPERFAMILY SSF75625 3 246 1.7E-87 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1219 5af0e01d273443246b2a175b4116adf2 250 Pfam PF01709 Transcriptional regulator 5 237 2.6E-88 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1219 5af0e01d273443246b2a175b4116adf2 250 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 239 34.27 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1219 5af0e01d273443246b2a175b4116adf2 250 Gene3D G3DSA:1.10.10.200 1 80 1.5E-32 T 14-10-2018 IPR017856 Integrase-like, N-terminal Afer_1219 5af0e01d273443246b2a175b4116adf2 250 Gene3D G3DSA:3.30.70.980 133 204 1.5E-52 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1219 5af0e01d273443246b2a175b4116adf2 250 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 237 1.0E-92 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1219 5af0e01d273443246b2a175b4116adf2 250 Gene3D G3DSA:3.30.70.980 85 236 1.5E-52 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_0286 012b29611599d0308c9dc18ebeddb175 467 Pfam PF00271 Helicase conserved C-terminal domain 252 349 1.9E-26 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_0286 012b29611599d0308c9dc18ebeddb175 467 SMART SM00487 35 232 4.5E-55 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Afer_0286 012b29611599d0308c9dc18ebeddb175 467 Pfam PF00270 DEAD/DEAH box helicase 40 207 2.9E-47 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Afer_0286 012b29611599d0308c9dc18ebeddb175 467 SUPERFAMILY SSF52540 86 369 4.44E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0286 012b29611599d0308c9dc18ebeddb175 467 Gene3D G3DSA:3.40.50.300 242 378 8.9E-47 T 14-10-2018 Afer_0286 012b29611599d0308c9dc18ebeddb175 467 Gene3D G3DSA:3.40.50.300 3 222 6.9E-73 T 14-10-2018 Afer_0286 012b29611599d0308c9dc18ebeddb175 467 SMART SM00490 268 349 2.9E-31 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.8E-35 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 Gene3D G3DSA:2.40.110.10 121 231 7.5E-31 T 14-10-2018 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 Gene3D G3DSA:1.10.540.10 1 120 3.6E-40 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 213 1.4E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 333 352 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 226 374 2.8E-50 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 Gene3D G3DSA:1.20.140.10 232 377 9.9E-52 T 14-10-2018 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 SUPERFAMILY SSF47203 225 374 3.06E-52 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 PIRSF PIRSF016578 1 375 2.8E-15 T 14-10-2018 Afer_0732 8d6cbd4363b520bfd964c9acaf796107 379 SUPERFAMILY SSF56645 3 239 3.53E-71 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Afer_0874 806927a66a8577e2c491838aeb418f59 536 Pfam PF00391 PEP-utilising enzyme, mobile domain 138 205 7.8E-13 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 Afer_0874 806927a66a8577e2c491838aeb418f59 536 SUPERFAMILY SSF47831 26 131 2.62E-12 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Afer_0874 806927a66a8577e2c491838aeb418f59 536 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 239 505 7.6E-72 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 Afer_0874 806927a66a8577e2c491838aeb418f59 536 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 268 287 9.6E-22 T 14-10-2018 Afer_0874 806927a66a8577e2c491838aeb418f59 536 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 429 444 9.6E-22 T 14-10-2018 Afer_0874 806927a66a8577e2c491838aeb418f59 536 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 412 427 9.6E-22 T 14-10-2018 Afer_0874 806927a66a8577e2c491838aeb418f59 536 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 476 9.6E-22 T 14-10-2018 Afer_0874 806927a66a8577e2c491838aeb418f59 536 Pfam PF05524 PEP-utilising enzyme, N-terminal 8 114 1.4E-10 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 Afer_0874 806927a66a8577e2c491838aeb418f59 536 Gene3D G3DSA:3.50.30.10 11 217 1.2E-32 T 14-10-2018 Afer_0874 806927a66a8577e2c491838aeb418f59 536 SUPERFAMILY SSF52009 113 222 4.45E-17 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 Afer_0874 806927a66a8577e2c491838aeb418f59 536 SUPERFAMILY SSF51621 231 505 1.57E-75 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Afer_0874 806927a66a8577e2c491838aeb418f59 536 Gene3D G3DSA:3.20.20.60 220 533 4.9E-84 T 14-10-2018 Afer_0874 806927a66a8577e2c491838aeb418f59 536 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 412 430 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 Afer_0874 806927a66a8577e2c491838aeb418f59 536 Gene3D G3DSA:1.10.274.10 26 134 1.2E-32 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 Afer_0210 3f21fac62674ac884b19adc8615c0ce2 156 Gene3D G3DSA:2.30.290.10 9 140 5.6E-26 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Afer_0210 3f21fac62674ac884b19adc8615c0ce2 156 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 13 136 17.352 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Afer_0210 3f21fac62674ac884b19adc8615c0ce2 156 SUPERFAMILY SSF141457 15 133 1.83E-24 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily Afer_0210 3f21fac62674ac884b19adc8615c0ce2 156 Pfam PF02623 FliW protein 15 132 5.3E-24 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 Gene3D G3DSA:3.30.870.10 517 685 4.5E-51 T 14-10-2018 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 Hamap MF_00347 Polyphosphate kinase [ppk]. 17 687 25.696 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 SUPERFAMILY SSF143724 123 315 3.92E-56 T 14-10-2018 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 Gene3D G3DSA:3.30.1840.10 12 313 5.2E-95 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 Pfam PF02503 Polyphosphate kinase middle domain 138 311 3.1E-56 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 SUPERFAMILY SSF140356 17 119 7.59E-28 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 Pfam PF13090 Polyphosphate kinase C-terminal domain 341 678 3.3E-132 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 Gene3D G3DSA:3.30.870.10 334 512 4.8E-67 T 14-10-2018 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 Pfam PF13089 Polyphosphate kinase N-terminal domain 20 126 1.4E-28 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 19 673 2.4E-215 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 SUPERFAMILY SSF56024 512 678 1.95E-50 T 14-10-2018 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 SUPERFAMILY SSF56024 340 508 5.02E-50 T 14-10-2018 Afer_1004 d512245da3d167e0cb24d91edf0fa875 689 PIRSF PIRSF015589 2 688 8.1E-231 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 2 720 26.98 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SUPERFAMILY SSF50249 647 716 2.31E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SMART SM00316 646 717 8.6E-20 T 14-10-2018 IPR022967 RNA-binding domain, S1 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SMART SM00322 573 641 2.1E-12 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SUPERFAMILY SSF54211 316 508 2.89E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SUPERFAMILY SSF46915 250 347 3.14E-18 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Gene3D G3DSA:3.30.230.70 6 246 7.8E-73 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 17 717 1.3E-260 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Pfam PF01138 3' exoribonuclease family, domain 1 16 145 1.7E-21 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Pfam PF01138 3' exoribonuclease family, domain 1 345 477 8.4E-19 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 PIRSF PIRSF005499 3 750 2.4E-267 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 266 341 7.5E-11 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SUPERFAMILY SSF54211 17 145 5.01E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SUPERFAMILY SSF55666 146 248 2.14E-17 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Pfam PF00013 KH domain 578 637 7.6E-11 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Gene3D G3DSA:3.30.230.70 257 570 3.9E-106 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SUPERFAMILY SSF55666 471 569 7.14E-24 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Gene3D G3DSA:3.30.1370.10 571 645 1.8E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 SUPERFAMILY SSF54791 576 666 1.6E-16 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Pfam PF00575 S1 RNA binding domain 647 716 1.1E-14 T 14-10-2018 IPR003029 S1 domain GO:0003676 Afer_0643 75e306dd644372c50e8fc27c618174c7 792 Gene3D G3DSA:2.40.50.140 646 719 1.4E-22 T 14-10-2018 Afer_0676 3956409938455cc0eef03984ebfa6dca 146 Gene3D G3DSA:3.40.50.1010 20 142 1.9E-19 T 14-10-2018 Afer_0676 3956409938455cc0eef03984ebfa6dca 146 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 22 145 11.499 T 14-10-2018 IPR022907 VapC family GO:0004540 Afer_0676 3956409938455cc0eef03984ebfa6dca 146 Pfam PF01850 PIN domain 23 137 7.5E-13 T 14-10-2018 IPR002716 PIN domain Afer_0676 3956409938455cc0eef03984ebfa6dca 146 SUPERFAMILY SSF88723 22 140 1.54E-16 T 14-10-2018 IPR029060 PIN-like domain superfamily Afer_1876 8258d7c214b369014769b1acaf266af0 151 Gene3D G3DSA:1.10.10.10 4 146 6.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1876 8258d7c214b369014769b1acaf266af0 151 Pfam PF01047 MarR family 37 93 6.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1876 8258d7c214b369014769b1acaf266af0 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1876 8258d7c214b369014769b1acaf266af0 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1876 8258d7c214b369014769b1acaf266af0 151 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1876 8258d7c214b369014769b1acaf266af0 151 SMART SM00347 29 128 2.1E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1876 8258d7c214b369014769b1acaf266af0 151 SUPERFAMILY SSF46785 7 143 6.12E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1876 8258d7c214b369014769b1acaf266af0 151 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 Pfam PF00231 ATP synthase 7 283 4.0E-68 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 PRINTS PR00126 ATP synthase gamma subunit signature 261 282 1.6E-26 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 PRINTS PR00126 ATP synthase gamma subunit signature 162 179 1.6E-26 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.6E-26 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 PRINTS PR00126 ATP synthase gamma subunit signature 230 249 1.6E-26 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 7 283 3.9E-64 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 Gene3D G3DSA:1.10.287.80 9 279 3.2E-68 T 14-10-2018 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 Gene3D G3DSA:3.40.1380.10 63 202 3.2E-68 T 14-10-2018 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 SUPERFAMILY SSF52943 7 283 1.2E-57 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 Hamap MF_00815 ATP synthase gamma chain [atpG]. 3 283 25.205 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1796 771d0557af69638cfaea3a1249b4a47a 296 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 269 282 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 566 1347 1.5E-250 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 Hamap MF_01871 UPF0753 protein . 559 1362 22.916 T 14-10-2018 IPR018752 Uncharacterised protein family UPF0753 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 114 134 3.9E-20 T 14-10-2018 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 229 250 3.9E-20 T 14-10-2018 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 317 329 3.9E-20 T 14-10-2018 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 161 182 3.9E-20 T 14-10-2018 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 251 277 3.9E-20 T 14-10-2018 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 86 111 3.9E-20 T 14-10-2018 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 78 125 6.3E-8 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0133 5d5cb4b94ea648092cf27efb44dc3208 1382 Pfam PF00361 Proton-conducting membrane transporter 138 355 5.3E-37 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_1829 59860fc5a092ad476a9ecff4e291c9cf 706 Gene3D G3DSA:3.40.50.300 637 705 1.0E-6 T 14-10-2018 Afer_1829 59860fc5a092ad476a9ecff4e291c9cf 706 Gene3D G3DSA:3.40.50.300 166 278 9.1E-9 T 14-10-2018 Afer_1829 59860fc5a092ad476a9ecff4e291c9cf 706 SUPERFAMILY SSF52540 171 700 3.91E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1829 59860fc5a092ad476a9ecff4e291c9cf 706 Pfam PF13245 AAA domain 190 520 4.4E-8 T 14-10-2018 Afer_1829 59860fc5a092ad476a9ecff4e291c9cf 706 Gene3D G3DSA:3.40.50.300 461 566 2.3E-8 T 14-10-2018 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 3.5E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 207 236 3.5E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 257 275 3.5E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 3.5E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 3.5E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 3.5E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 SUPERFAMILY SSF51735 122 282 2.71E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 14-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 3.5E-32 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 283 1.1E-49 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 Gene3D G3DSA:3.40.50.10860 8 278 1.1E-92 T 14-10-2018 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 Gene3D G3DSA:3.40.50.720 6 260 1.1E-92 T 14-10-2018 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 SUPERFAMILY SSF53223 3 121 2.49E-31 T 14-10-2018 Afer_0323 16f420774a28238dd37e17cc67c96dd9 289 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 284 32.669 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 3 456 29.79 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 Gene3D G3DSA:1.10.10.350 360 455 2.2E-21 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 SUPERFAMILY SSF52374 5 293 1.05E-98 T 14-10-2018 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 189 197 4.3E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 4.3E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 4.3E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 4.3E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 PRINTS PR00987 Glutamyl-tRNA synthetase signature 173 183 4.3E-22 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 Gene3D G3DSA:3.40.50.620 1 308 4.6E-118 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 SUPERFAMILY SSF48163 294 453 1.28E-33 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 453 4.2E-137 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 Afer_1528 2c3d74c96307f39efc764f17d44edf62 468 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 298 3.8E-85 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 Afer_1933 ba857c25a1b123ac000b24a0192651cc 272 SUPERFAMILY SSF161098 25 264 2.62E-32 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1933 ba857c25a1b123ac000b24a0192651cc 272 Gene3D G3DSA:1.10.3720.10 21 268 3.6E-38 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1933 ba857c25a1b123ac000b24a0192651cc 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 263 3.8E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 TIGRFAM TIGR00861 MIP: MIP family channel proteins 25 273 8.0E-61 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 SUPERFAMILY SSF81338 19 277 6.28E-69 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 ProSitePatterns PS00221 MIP family signature. 88 96 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 Pfam PF00230 Major intrinsic protein 17 273 1.6E-52 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 PRINTS PR00783 Major intrinsic protein family signature 20 39 3.4E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 PRINTS PR00783 Major intrinsic protein family signature 107 126 3.4E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 PRINTS PR00783 Major intrinsic protein family signature 175 193 3.4E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 PRINTS PR00783 Major intrinsic protein family signature 208 230 3.4E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 PRINTS PR00783 Major intrinsic protein family signature 256 276 3.4E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 PRINTS PR00783 Major intrinsic protein family signature 70 94 3.4E-47 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 Afer_0875 a6a975d1333038ba8e24c3c7ba0cab0c 295 Gene3D G3DSA:1.20.1080.10 14 281 2.5E-83 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 Afer_0114 b07c6b570c5de57540759c23a4b6acaf 852 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 40 135 1.4E-19 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 Afer_0114 b07c6b570c5de57540759c23a4b6acaf 852 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 416 593 6.9E-27 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 Gene3D G3DSA:1.10.10.10 8 109 3.8E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 SMART SM00450 125 221 3.5E-16 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 SMART SM00418 22 100 3.6E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 SUPERFAMILY SSF52821 125 225 2.49E-23 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 Gene3D G3DSA:3.40.250.10 126 227 1.5E-20 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 Pfam PF00581 Rhodanese-like domain 128 216 1.7E-10 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 SUPERFAMILY SSF46785 17 109 1.31E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 71 86 1.3E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.3E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 24 39 1.3E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1172 eb9f6d74bb4ce2fc32efdbc6ef64fae7 232 Pfam PF01022 Bacterial regulatory protein, arsR family 31 73 2.9E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1133 7f86292ab82a0c359a540efdff6720aa 299 SUPERFAMILY SSF56349 7 282 6.47E-51 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Afer_1133 7f86292ab82a0c359a540efdff6720aa 299 Pfam PF00589 Phage integrase family 113 279 6.6E-40 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Afer_1133 7f86292ab82a0c359a540efdff6720aa 299 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 294 48.06 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD Afer_1133 7f86292ab82a0c359a540efdff6720aa 299 Gene3D G3DSA:1.10.443.10 111 288 1.6E-51 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Afer_1133 7f86292ab82a0c359a540efdff6720aa 299 Gene3D G3DSA:1.10.150.130 5 98 4.2E-13 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Afer_1133 7f86292ab82a0c359a540efdff6720aa 299 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 88 2.7E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Afer_0174 2c18b2f9cce70d986d2d56601f80d3bc 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 229 312 3.1E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_0174 2c18b2f9cce70d986d2d56601f80d3bc 323 Gene3D G3DSA:3.40.50.300 1 319 5.4E-86 T 14-10-2018 Afer_0174 2c18b2f9cce70d986d2d56601f80d3bc 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 295 5.1E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 Afer_0174 2c18b2f9cce70d986d2d56601f80d3bc 323 Pfam PF00005 ABC transporter 23 179 8.4E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0174 2c18b2f9cce70d986d2d56601f80d3bc 323 SMART SM00382 32 229 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0174 2c18b2f9cce70d986d2d56601f80d3bc 323 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0174 2c18b2f9cce70d986d2d56601f80d3bc 323 SUPERFAMILY SSF52540 3 250 3.55E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0796 9e7a907ebe8d301a0f914f7639c54a27 506 Gene3D G3DSA:1.10.275.10 3 194 4.8E-62 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Afer_0796 9e7a907ebe8d301a0f914f7639c54a27 506 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 136 152 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 Afer_0796 9e7a907ebe8d301a0f914f7639c54a27 506 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 6 499 1.3E-200 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_0796 9e7a907ebe8d301a0f914f7639c54a27 506 Gene3D G3DSA:1.20.200.10 195 504 8.1E-115 T 14-10-2018 Afer_0796 9e7a907ebe8d301a0f914f7639c54a27 506 Pfam PF00221 Aromatic amino acid lyase 8 467 1.0E-181 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 Afer_0796 9e7a907ebe8d301a0f914f7639c54a27 506 SUPERFAMILY SSF48557 6 498 4.24E-186 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Afer_0796 9e7a907ebe8d301a0f914f7639c54a27 506 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 500 42.095 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_0328 54063ca4aa44ad57db572318ea8dba37 97 Pfam PF02467 Transcription factor WhiB 19 82 6.9E-23 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Afer_0328 54063ca4aa44ad57db572318ea8dba37 97 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 88 16.108 T 14-10-2018 IPR003482 Transcription factor WhiB Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 1 113 29.986 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 PRINTS PR00061 Ribosomal protein L19 signature 33 62 1.5E-39 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 PRINTS PR00061 Ribosomal protein L19 signature 87 112 1.5E-39 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 PRINTS PR00061 Ribosomal protein L19 signature 3 32 1.5E-39 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 SUPERFAMILY SSF50104 2 112 2.51E-44 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 8 112 1.5E-46 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 ProSitePatterns PS01015 Ribosomal protein L19 signature. 85 100 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 Pfam PF01245 Ribosomal protein L19 6 112 5.7E-48 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 Gene3D G3DSA:2.30.30.790 4 113 9.6E-14 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1497 3dc3058ea2ca32ac53fbde299b3c0ded 113 PIRSF PIRSF002191 1 113 1.1E-47 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1459 1a7d7baf06bc604cd0067d41136fa65b 155 Gene3D G3DSA:3.30.530.20 2 147 8.8E-14 T 14-10-2018 IPR023393 START-like domain superfamily Afer_1459 1a7d7baf06bc604cd0067d41136fa65b 155 SUPERFAMILY SSF55961 4 144 2.86E-17 T 14-10-2018 Afer_1459 1a7d7baf06bc604cd0067d41136fa65b 155 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 3 143 1.7E-9 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase Afer_1403 16269062255d216a9616f82130bda9b3 149 Gene3D G3DSA:3.40.1260.10 12 149 1.4E-32 T 14-10-2018 IPR027396 DsrEFH-like Afer_1403 16269062255d216a9616f82130bda9b3 149 Pfam PF13686 DsrE/DsrF/DrsH-like family 77 145 2.4E-8 T 14-10-2018 IPR032836 DsrE2-like family Afer_1403 16269062255d216a9616f82130bda9b3 149 Pfam PF13686 DsrE/DsrF/DrsH-like family 19 66 5.1E-6 T 14-10-2018 IPR032836 DsrE2-like family Afer_1403 16269062255d216a9616f82130bda9b3 149 SUPERFAMILY SSF75169 19 140 3.3E-14 T 14-10-2018 IPR027396 DsrEFH-like Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 Gene3D G3DSA:3.40.47.10 6 273 3.1E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 ProSitePatterns PS00737 Thiolases signature 2. 336 352 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 8.7E-46 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 SUPERFAMILY SSF53901 269 389 5.34E-44 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 388 1.3E-141 T 14-10-2018 IPR002155 Thiolase GO:0016747 Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 Pfam PF00108 Thiolase, N-terminal domain 5 259 2.4E-77 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 PIRSF PIRSF000429 1 391 5.6E-133 T 14-10-2018 IPR002155 Thiolase GO:0016747 Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 SUPERFAMILY SSF53901 3 267 5.76E-81 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0085 1ec189c3aedd452fa526e485ca71765a 391 Gene3D G3DSA:3.40.47.10 127 387 3.1E-150 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_0399 c570f005f352577ecc26ca8bb44c6afe 214 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 209 30.5 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0399 c570f005f352577ecc26ca8bb44c6afe 214 Pfam PF00573 Ribosomal protein L4/L1 family 18 204 2.0E-54 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 Afer_0399 c570f005f352577ecc26ca8bb44c6afe 214 SUPERFAMILY SSF52166 1 207 1.44E-63 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0399 c570f005f352577ecc26ca8bb44c6afe 214 Gene3D G3DSA:3.40.1370.10 5 213 1.7E-62 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0399 c570f005f352577ecc26ca8bb44c6afe 214 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 18 204 3.9E-63 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1154 b156f4e2af2a0e7ce3a61e79ee7d7584 255 Gene3D G3DSA:3.20.20.70 1 252 4.4E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1154 b156f4e2af2a0e7ce3a61e79ee7d7584 255 SUPERFAMILY SSF110399 3 237 1.12E-71 T 14-10-2018 Afer_1154 b156f4e2af2a0e7ce3a61e79ee7d7584 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 5 246 6.9E-89 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 Afer_0630 a1e80ed3ce562f8ad72f76bc852a6da3 475 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 430 456 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 Afer_0630 a1e80ed3ce562f8ad72f76bc852a6da3 475 Pfam PF01148 Cytidylyltransferase family 214 471 2.4E-52 T 14-10-2018 Afer_0102 ca93f43cd3883fb545aebee5479c2520 635 Gene3D G3DSA:3.40.50.300 15 178 8.8E-85 T 14-10-2018 Afer_0102 ca93f43cd3883fb545aebee5479c2520 635 Gene3D G3DSA:1.10.8.60 10 230 8.8E-85 T 14-10-2018 Afer_0102 ca93f43cd3883fb545aebee5479c2520 635 Pfam PF13177 DNA polymerase III, delta subunit 22 178 1.5E-42 T 14-10-2018 Afer_0102 ca93f43cd3883fb545aebee5479c2520 635 SUPERFAMILY SSF52540 35 223 2.55E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0102 ca93f43cd3883fb545aebee5479c2520 635 SMART SM00382 39 180 3.7E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0102 ca93f43cd3883fb545aebee5479c2520 635 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 5 276 7.3E-96 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 Afer_0075 1b3f6bc31e998c4ec0df9de28af7512e 175 SUPERFAMILY SSF46785 14 148 3.42E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0075 1b3f6bc31e998c4ec0df9de28af7512e 175 SMART SM00347 34 133 4.1E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0075 1b3f6bc31e998c4ec0df9de28af7512e 175 Gene3D G3DSA:1.10.10.10 9 163 6.5E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0075 1b3f6bc31e998c4ec0df9de28af7512e 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0075 1b3f6bc31e998c4ec0df9de28af7512e 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0075 1b3f6bc31e998c4ec0df9de28af7512e 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 2.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0075 1b3f6bc31e998c4ec0df9de28af7512e 175 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 2.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0075 1b3f6bc31e998c4ec0df9de28af7512e 175 Pfam PF01047 MarR family 48 97 6.1E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 430 28.204 T 14-10-2018 IPR026593 Protein translocase subunit SecY Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 Pfam PF00344 SecY translocase 73 414 5.1E-101 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 Gene3D G3DSA:1.10.3370.10 1 426 1.9E-146 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 71 91 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 311 333 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 112 135 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 183 206 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 157 182 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 366 384 2.5E-90 T 14-10-2018 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 426 9.1E-114 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 SUPERFAMILY SSF103491 3 421 5.1E-106 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Afer_0418 fe1588b141dc1e95da68d75eb5df1de9 431 PIRSF PIRSF004557 1 431 6.4E-111 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Afer_0167 7c0a72d09f43f9cf16191cf14f4032a4 322 Gene3D G3DSA:3.40.50.300 29 240 1.5E-50 T 14-10-2018 Afer_0167 7c0a72d09f43f9cf16191cf14f4032a4 322 SUPERFAMILY SSF52540 32 211 3.16E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0167 7c0a72d09f43f9cf16191cf14f4032a4 322 PRINTS PR00478 Phosphoribulokinase family signature 183 206 8.7E-15 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Afer_0167 7c0a72d09f43f9cf16191cf14f4032a4 322 PRINTS PR00478 Phosphoribulokinase family signature 165 182 8.7E-15 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Afer_0167 7c0a72d09f43f9cf16191cf14f4032a4 322 PRINTS PR00478 Phosphoribulokinase family signature 130 148 8.7E-15 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Afer_0167 7c0a72d09f43f9cf16191cf14f4032a4 322 PRINTS PR00478 Phosphoribulokinase family signature 38 55 8.7E-15 T 14-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 Afer_0167 7c0a72d09f43f9cf16191cf14f4032a4 322 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 34 210 7.1E-37 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 Afer_0423 ee0137a9ea22acb2704539614e07ec75 125 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 27.394 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0423 ee0137a9ea22acb2704539614e07ec75 125 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 3.4E-54 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0423 ee0137a9ea22acb2704539614e07ec75 125 Gene3D G3DSA:4.10.910.10 73 125 2.4E-26 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0423 ee0137a9ea22acb2704539614e07ec75 125 Pfam PF00416 Ribosomal protein S13/S18 3 109 8.8E-33 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0423 ee0137a9ea22acb2704539614e07ec75 125 SUPERFAMILY SSF46946 2 122 2.49E-48 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Afer_0423 ee0137a9ea22acb2704539614e07ec75 125 PIRSF PIRSF002134 1 125 4.9E-46 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0423 ee0137a9ea22acb2704539614e07ec75 125 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0423 ee0137a9ea22acb2704539614e07ec75 125 Gene3D G3DSA:1.10.8.50 1 72 6.6E-31 T 14-10-2018 Afer_1371 e2cb2c00082f8ca249348b9ff33d0488 145 Pfam PF03061 Thioesterase superfamily 50 123 7.0E-11 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 Afer_1371 e2cb2c00082f8ca249348b9ff33d0488 145 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 128 8.5E-16 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 Afer_1371 e2cb2c00082f8ca249348b9ff33d0488 145 TIGRFAM TIGR02286 PaaD: phenylacetic acid degradation protein PaaD 23 132 3.2E-41 T 14-10-2018 IPR011973 Phenylacetic acid degradation protein PaaD GO:0016790 Afer_1371 e2cb2c00082f8ca249348b9ff33d0488 145 Gene3D G3DSA:3.10.129.10 5 143 1.1E-45 T 14-10-2018 Afer_1371 e2cb2c00082f8ca249348b9ff33d0488 145 SUPERFAMILY SSF54637 3 128 6.66E-28 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_1537 51afe13e9eeade80c5f5985a51f9c38d 308 Gene3D G3DSA:3.30.470.10 10 126 4.7E-98 T 14-10-2018 Afer_1537 51afe13e9eeade80c5f5985a51f9c38d 308 Pfam PF01063 Amino-transferase class IV 35 267 1.8E-52 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 Afer_1537 51afe13e9eeade80c5f5985a51f9c38d 308 ProSitePatterns PS00770 Aminotransferases class-IV signature. 193 222 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 Afer_1537 51afe13e9eeade80c5f5985a51f9c38d 308 SUPERFAMILY SSF56752 7 303 2.22E-101 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 Afer_1537 51afe13e9eeade80c5f5985a51f9c38d 308 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 306 6.5E-124 T 14-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 Afer_1537 51afe13e9eeade80c5f5985a51f9c38d 308 Gene3D G3DSA:3.20.10.10 137 288 4.7E-98 T 14-10-2018 Afer_0526 0dbfe798811341818b9d45e9ecd0aa85 293 Gene3D G3DSA:3.30.70.890 149 228 1.8E-8 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Afer_0526 0dbfe798811341818b9d45e9ecd0aa85 293 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 271 19.625 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 Afer_0526 0dbfe798811341818b9d45e9ecd0aa85 293 SUPERFAMILY SSF55060 150 224 1.58E-6 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Afer_0526 0dbfe798811341818b9d45e9ecd0aa85 293 Gene3D G3DSA:3.30.230.10 1 145 4.0E-29 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_0526 0dbfe798811341818b9d45e9ecd0aa85 293 SUPERFAMILY SSF54211 2 145 1.14E-18 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_1629 29d0b7a139d15c85a67801cba91d0370 485 Gene3D G3DSA:1.20.1740.10 16 463 4.2E-38 T 14-10-2018 Afer_1629 29d0b7a139d15c85a67801cba91d0370 485 PIRSF PIRSF006060 3 480 2.7E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1629 29d0b7a139d15c85a67801cba91d0370 485 Pfam PF13520 Amino acid permease 36 434 5.8E-35 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_0188 64b53c2d01cbef6e8b55ef5cafe874c6 138 PIRSF PIRSF000178 18 130 1.9E-12 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0188 64b53c2d01cbef6e8b55ef5cafe874c6 138 SUPERFAMILY SSF81343 13 129 3.27E-24 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0188 64b53c2d01cbef6e8b55ef5cafe874c6 138 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 20 126 2.4E-23 T 14-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0188 64b53c2d01cbef6e8b55ef5cafe874c6 138 Gene3D G3DSA:1.20.1300.10 18 131 7.8E-19 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0188 64b53c2d01cbef6e8b55ef5cafe874c6 138 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 13 124 1.4E-23 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0224 60d7a79a715d64f4bd6c784436885d40 249 Pfam PF00990 Diguanylate cyclase, GGDEF domain 90 228 6.2E-10 T 14-10-2018 IPR000160 GGDEF domain Afer_0224 60d7a79a715d64f4bd6c784436885d40 249 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 89 229 5.4E-11 T 14-10-2018 IPR000160 GGDEF domain Afer_0224 60d7a79a715d64f4bd6c784436885d40 249 SUPERFAMILY SSF55073 94 228 1.65E-13 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_0224 60d7a79a715d64f4bd6c784436885d40 249 SMART SM00267 77 244 7.2E-5 T 14-10-2018 IPR000160 GGDEF domain Afer_0224 60d7a79a715d64f4bd6c784436885d40 249 Gene3D G3DSA:3.30.70.270 87 235 1.0E-15 T 14-10-2018 Afer_2002 b4002fa5e2e85e127eadff7fe972bb70 504 Pfam PF01565 FAD binding domain 51 189 1.0E-33 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Afer_2002 b4002fa5e2e85e127eadff7fe972bb70 504 Gene3D G3DSA:1.10.45.10 464 491 4.6E-6 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Afer_2002 b4002fa5e2e85e127eadff7fe972bb70 504 SUPERFAMILY SSF56176 10 231 9.81E-54 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_2002 b4002fa5e2e85e127eadff7fe972bb70 504 Pfam PF02913 FAD linked oxidases, C-terminal domain 231 490 7.3E-11 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Afer_2002 b4002fa5e2e85e127eadff7fe972bb70 504 SUPERFAMILY SSF55103 236 492 2.13E-19 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Afer_2002 b4002fa5e2e85e127eadff7fe972bb70 504 Gene3D G3DSA:3.30.465.40 9 238 7.2E-60 T 14-10-2018 Afer_1819 c36da12632c6c72f41590b61e2d53f6f 70 Pfam PF02416 mttA/Hcf106 family 8 48 3.1E-13 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Afer_1819 c36da12632c6c72f41590b61e2d53f6f 70 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 7 48 3.9E-17 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 Afer_0738 18fecd45f14ca866e8b1ec6f0342f287 346 Gene3D G3DSA:2.160.10.10 249 334 3.2E-10 T 14-10-2018 Afer_0738 18fecd45f14ca866e8b1ec6f0342f287 346 SUPERFAMILY SSF53448 2 313 4.96E-68 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0738 18fecd45f14ca866e8b1ec6f0342f287 346 Gene3D G3DSA:3.90.550.10 1 239 2.1E-64 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0738 18fecd45f14ca866e8b1ec6f0342f287 346 Pfam PF00483 Nucleotidyl transferase 3 233 1.6E-42 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Afer_0827 8536ae950228db1d9db6f86008137172 412 Gene3D G3DSA:3.30.750.70 175 270 3.5E-26 T 14-10-2018 Afer_0827 8536ae950228db1d9db6f86008137172 412 Gene3D G3DSA:3.40.1080.20 274 411 3.7E-37 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily Afer_0827 8536ae950228db1d9db6f86008137172 412 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 255 404 9.4E-43 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain Afer_0827 8536ae950228db1d9db6f86008137172 412 SUPERFAMILY SSF100950 62 212 1.26E-10 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Afer_0827 8536ae950228db1d9db6f86008137172 412 SUPERFAMILY SSF100950 181 407 1.17E-44 T 14-10-2018 IPR037171 NagB/RpiA transferase-like Afer_0827 8536ae950228db1d9db6f86008137172 412 Gene3D G3DSA:3.40.1080.10 8 172 4.1E-22 T 14-10-2018 Afer_0032 66cda6ecd612151e98b09f41ed355612 323 Gene3D G3DSA:1.10.101.10 79 149 1.1E-18 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Afer_0032 66cda6ecd612151e98b09f41ed355612 323 Gene3D G3DSA:1.10.101.10 3 70 2.4E-11 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 Afer_0032 66cda6ecd612151e98b09f41ed355612 323 Pfam PF01471 Putative peptidoglycan binding domain 86 140 1.8E-15 T 14-10-2018 IPR002477 Peptidoglycan binding-like Afer_0032 66cda6ecd612151e98b09f41ed355612 323 Pfam PF01471 Putative peptidoglycan binding domain 12 65 1.7E-12 T 14-10-2018 IPR002477 Peptidoglycan binding-like Afer_0032 66cda6ecd612151e98b09f41ed355612 323 SUPERFAMILY SSF47090 80 144 7.22E-19 T 14-10-2018 IPR036365 PGBD-like superfamily Afer_0032 66cda6ecd612151e98b09f41ed355612 323 SUPERFAMILY SSF47090 4 66 1.31E-12 T 14-10-2018 IPR036365 PGBD-like superfamily Afer_1886 116ebda54b47ff01fa5bcaa3b3a3e727 326 Gene3D G3DSA:3.90.640.10 172 245 2.7E-57 T 14-10-2018 Afer_1886 116ebda54b47ff01fa5bcaa3b3a3e727 326 SUPERFAMILY SSF53067 148 315 7.92E-18 T 14-10-2018 Afer_1886 116ebda54b47ff01fa5bcaa3b3a3e727 326 Gene3D G3DSA:3.30.420.40 4 311 2.7E-57 T 14-10-2018 Afer_1886 116ebda54b47ff01fa5bcaa3b3a3e727 326 SUPERFAMILY SSF53067 4 127 6.31E-6 T 14-10-2018 Afer_1886 116ebda54b47ff01fa5bcaa3b3a3e727 326 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 38 56 4.8E-5 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_1886 116ebda54b47ff01fa5bcaa3b3a3e727 326 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 286 312 4.8E-5 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_1886 116ebda54b47ff01fa5bcaa3b3a3e727 326 Gene3D G3DSA:3.30.420.40 140 303 2.7E-57 T 14-10-2018 Afer_1886 116ebda54b47ff01fa5bcaa3b3a3e727 326 Pfam PF06723 MreB/Mbl protein 3 314 9.2E-42 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_0944 05f6236ac2746a8b01836561e500b4c3 378 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 357 8.9E-112 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Afer_0944 05f6236ac2746a8b01836561e500b4c3 378 SUPERFAMILY SSF51713 4 358 1.11E-117 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Afer_0944 05f6236ac2746a8b01836561e500b4c3 378 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 362 44.819 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Afer_0944 05f6236ac2746a8b01836561e500b4c3 378 Gene3D G3DSA:3.20.20.105 2 366 3.0E-129 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Afer_0944 05f6236ac2746a8b01836561e500b4c3 378 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 357 1.7E-63 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Afer_0944 05f6236ac2746a8b01836561e500b4c3 378 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 354 1.4E-111 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 Afer_0051 d2c9db4cf79349bddafa465bd803eb00 676 Pfam PF02754 Cysteine-rich domain 427 513 5.4E-15 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_0051 d2c9db4cf79349bddafa465bd803eb00 676 Pfam PF02754 Cysteine-rich domain 552 639 4.4E-17 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_0051 d2c9db4cf79349bddafa465bd803eb00 676 SUPERFAMILY SSF46548 273 372 1.92E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0051 d2c9db4cf79349bddafa465bd803eb00 676 Gene3D G3DSA:1.10.1060.10 270 377 4.2E-11 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0051 d2c9db4cf79349bddafa465bd803eb00 676 Pfam PF13237 4Fe-4S dicluster domain 280 355 1.1E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_0051 d2c9db4cf79349bddafa465bd803eb00 676 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 344 355 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_0051 d2c9db4cf79349bddafa465bd803eb00 676 SUPERFAMILY SSF103501 10 239 9.42E-5 T 14-10-2018 IPR036197 NarG-like superfamily Afer_0400 0df671da7547d89f9608c16bacda4653 98 Pfam PF00276 Ribosomal protein L23 10 94 7.2E-27 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Afer_0400 0df671da7547d89f9608c16bacda4653 98 SUPERFAMILY SSF54189 5 96 6.12E-26 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0400 0df671da7547d89f9608c16bacda4653 98 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 7 98 19.226 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 Afer_0400 0df671da7547d89f9608c16bacda4653 98 Gene3D G3DSA:3.30.70.330 6 98 1.0E-28 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily Afer_0976 3deb35b362f2f090fe6a720702f932f5 163 Gene3D G3DSA:3.40.1260.10 5 163 8.4E-53 T 14-10-2018 IPR027396 DsrEFH-like Afer_0976 3deb35b362f2f090fe6a720702f932f5 163 Pfam PF13686 DsrE/DsrF/DrsH-like family 8 162 2.8E-44 T 14-10-2018 IPR032836 DsrE2-like family Afer_0976 3deb35b362f2f090fe6a720702f932f5 163 SUPERFAMILY SSF75169 8 162 9.42E-19 T 14-10-2018 IPR027396 DsrEFH-like Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 Gene3D G3DSA:2.60.34.10 349 477 2.3E-59 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 Pfam PF00012 Hsp70 protein 4 78 2.1E-28 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 Pfam PF00012 Hsp70 protein 80 576 5.0E-219 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 Gene3D G3DSA:3.30.420.40 160 339 5.8E-145 T 14-10-2018 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 SUPERFAMILY SSF53067 162 354 8.03E-67 T 14-10-2018 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 575 1.2E-286 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 SUPERFAMILY SSF53067 1 159 1.55E-58 T 14-10-2018 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 Gene3D G3DSA:3.90.640.10 200 281 5.8E-145 T 14-10-2018 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 337 357 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 360 379 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 54 62 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 174 184 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 306 322 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 3 16 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 441 457 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 31 43 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 PRINTS PR00301 70kDa heat shock protein signature 114 134 6.1E-77 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 Gene3D G3DSA:1.20.1270.10 479 579 1.7E-29 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 SUPERFAMILY SSF100920 356 512 4.45E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 Gene3D G3DSA:3.30.420.40 5 348 5.8E-145 T 14-10-2018 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 607 37.163 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 Afer_1960 b1319f62601c09b30ce5c057dd45f7e6 613 SUPERFAMILY SSF100934 479 581 3.66E-16 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 396 1.0E-137 T 14-10-2018 IPR002155 Thiolase GO:0016747 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 Pfam PF02803 Thiolase, C-terminal domain 274 397 6.4E-42 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 Gene3D G3DSA:3.40.47.10 6 278 3.4E-157 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 SUPERFAMILY SSF53901 3 272 4.76E-82 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 Pfam PF00108 Thiolase, N-terminal domain 5 263 5.3E-81 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 SUPERFAMILY SSF53901 273 397 3.12E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 Gene3D G3DSA:3.40.47.10 139 395 3.4E-157 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 Afer_1370 97179f5351c3396293116a9ffcd31be7 399 PIRSF PIRSF000429 1 399 5.2E-133 T 14-10-2018 IPR002155 Thiolase GO:0016747 Afer_0638 8c290d077d56247f173895f328e23058 885 Pfam PF00009 Elongation factor Tu GTP binding domain 387 542 5.5E-34 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0638 8c290d077d56247f173895f328e23058 885 ProSitePatterns PS01176 Initiation factor 2 signature. 837 859 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Afer_0638 8c290d077d56247f173895f328e23058 885 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 385 540 1.0E-33 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Afer_0638 8c290d077d56247f173895f328e23058 885 SUPERFAMILY SSF52540 383 554 2.46E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0638 8c290d077d56247f173895f328e23058 885 SUPERFAMILY SSF50447 787 884 1.79E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_0638 8c290d077d56247f173895f328e23058 885 SUPERFAMILY SSF50447 555 636 1.16E-22 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_0638 8c290d077d56247f173895f328e23058 885 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 16 60 4.6E-12 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Afer_0638 8c290d077d56247f173895f328e23058 885 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 305 350 9.5E-6 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal Afer_0638 8c290d077d56247f173895f328e23058 885 Gene3D G3DSA:2.40.30.10 788 885 9.5E-33 T 14-10-2018 Afer_0638 8c290d077d56247f173895f328e23058 885 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 295 884 4.5E-243 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Afer_0638 8c290d077d56247f173895f328e23058 885 Pfam PF11987 Translation-initiation factor 2 671 776 3.4E-38 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 Afer_0638 8c290d077d56247f173895f328e23058 885 Gene3D G3DSA:3.40.50.300 380 553 3.8E-73 T 14-10-2018 Afer_0638 8c290d077d56247f173895f328e23058 885 SUPERFAMILY SSF52156 669 793 7.32E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Afer_0638 8c290d077d56247f173895f328e23058 885 Gene3D G3DSA:2.40.30.10 554 667 5.0E-37 T 14-10-2018 Afer_0638 8c290d077d56247f173895f328e23058 885 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 16 884 17.068 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 Afer_0638 8c290d077d56247f173895f328e23058 885 Gene3D G3DSA:3.40.50.10050 679 787 1.8E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily Afer_0638 8c290d077d56247f173895f328e23058 885 Gene3D G3DSA:1.10.10.2480 15 69 2.7E-17 T 14-10-2018 Afer_0638 8c290d077d56247f173895f328e23058 885 Pfam PF03144 Elongation factor Tu domain 2 807 874 2.0E-7 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Afer_1198 6fea827fe4fd44961d79d5872c066a5f 374 SUPERFAMILY SSF53649 51 372 4.58E-38 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Afer_1198 6fea827fe4fd44961d79d5872c066a5f 374 Gene3D G3DSA:3.40.720.10 47 367 4.5E-30 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Afer_1198 6fea827fe4fd44961d79d5872c066a5f 374 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 180 316 1.5E-11 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Afer_1198 6fea827fe4fd44961d79d5872c066a5f 374 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 54 115 1.4E-6 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 Afer_1104 a233170bd7f6c0e4e53756b69899f009 120 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 39 112 4.8E-32 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Afer_1104 a233170bd7f6c0e4e53756b69899f009 120 SUPERFAMILY SSF141734 14 116 2.48E-41 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Afer_1104 a233170bd7f6c0e4e53756b69899f009 120 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 14 117 28.292 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Afer_1104 a233170bd7f6c0e4e53756b69899f009 120 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 62 112 8.0E-13 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 Afer_1104 a233170bd7f6c0e4e53756b69899f009 120 Gene3D G3DSA:3.10.20.400 11 104 3.0E-34 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 Pfam PF08442 ATP-grasp domain 3 193 4.0E-62 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 376 3.8E-128 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 Pfam PF00549 CoA-ligase 254 348 2.7E-17 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 SUPERFAMILY SSF52210 231 375 1.57E-42 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 Gene3D G3DSA:3.40.50.261 231 379 6.3E-46 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 248 273 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 Gene3D G3DSA:3.30.470.20 3 219 1.0E-78 T 14-10-2018 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 PIRSF PIRSF001554 1 380 2.5E-133 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 SUPERFAMILY SSF56059 3 224 9.72E-67 T 14-10-2018 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 Gene3D G3DSA:3.30.1490.20 21 96 1.0E-78 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Afer_0319 6352d41bc58f64185ccfbfb5f91d6610 382 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 378 37.1 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 Gene3D G3DSA:3.40.50.800 4 547 4.1E-169 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 367 2.0E-8 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 Gene3D G3DSA:3.90.960.10 239 384 4.1E-169 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 SUPERFAMILY SSF55826 217 382 4.45E-11 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 SUPERFAMILY SSF55681 10 474 1.16E-75 T 14-10-2018 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 SUPERFAMILY SSF52954 460 562 3.32E-24 T 14-10-2018 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 Pfam PF03129 Anticodon binding domain 471 561 7.3E-14 T 14-10-2018 IPR004154 Anticodon-binding Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 558 6.3E-135 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 143 154 1.1E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 133 141 1.1E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 1.1E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 103 114 1.1E-14 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 102 455 9.7E-33 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0634 05147ff8c3db7f51a425ca788fada48e 572 Gene3D G3DSA:3.30.930.10 11 461 4.1E-169 T 14-10-2018 Afer_1418 de7019b08811414d0cb3c0eaf0b931ee 145 SUPERFAMILY SSF160719 34 141 6.02E-32 T 14-10-2018 Afer_1418 de7019b08811414d0cb3c0eaf0b931ee 145 Pfam PF04965 Gene 25-like lysozyme 46 128 1.3E-23 T 14-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD Afer_1418 de7019b08811414d0cb3c0eaf0b931ee 145 Gene3D G3DSA:3.10.450.40 11 141 3.0E-46 T 14-10-2018 Afer_0064 27cb046e6f3eecde334c93fa93bbc3ec 267 SUPERFAMILY SSF47240 17 203 1.22E-21 T 14-10-2018 IPR009078 Ferritin-like superfamily Afer_0064 27cb046e6f3eecde334c93fa93bbc3ec 267 Gene3D G3DSA:1.10.620.20 16 221 2.6E-12 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Afer_0649 22f6c4a2b796cdc0e20079d1e4f92db6 416 Gene3D G3DSA:3.40.710.10 87 306 2.0E-41 T 14-10-2018 Afer_0649 22f6c4a2b796cdc0e20079d1e4f92db6 416 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 186 199 2.0E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Afer_0649 22f6c4a2b796cdc0e20079d1e4f92db6 416 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 159 176 2.0E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Afer_0649 22f6c4a2b796cdc0e20079d1e4f92db6 416 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 99 110 2.0E-9 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Afer_0649 22f6c4a2b796cdc0e20079d1e4f92db6 416 SUPERFAMILY SSF56601 53 295 7.24E-32 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Afer_0649 22f6c4a2b796cdc0e20079d1e4f92db6 416 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 93 280 8.2E-21 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Afer_0088 eb24b51e8070aaace0521334713c6933 520 Gene3D G3DSA:3.30.200.20 25 112 6.5E-28 T 14-10-2018 Afer_0088 eb24b51e8070aaace0521334713c6933 520 Gene3D G3DSA:3.30.10.20 439 506 6.2E-15 T 14-10-2018 Afer_0088 eb24b51e8070aaace0521334713c6933 520 Gene3D G3DSA:3.30.10.20 371 438 1.0E-15 T 14-10-2018 Afer_0088 eb24b51e8070aaace0521334713c6933 520 SMART SM00740 369 436 1.3E-9 T 14-10-2018 IPR005543 PASTA domain Afer_0088 eb24b51e8070aaace0521334713c6933 520 SMART SM00740 437 504 4.8E-7 T 14-10-2018 IPR005543 PASTA domain Afer_0088 eb24b51e8070aaace0521334713c6933 520 Gene3D G3DSA:1.10.510.10 114 302 2.6E-55 T 14-10-2018 Afer_0088 eb24b51e8070aaace0521334713c6933 520 Pfam PF00069 Protein kinase domain 33 281 8.9E-51 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Afer_0088 eb24b51e8070aaace0521334713c6933 520 PIRSF PIRSF000615 133 313 1.2E-13 T 14-10-2018 Afer_0088 eb24b51e8070aaace0521334713c6933 520 Pfam PF03793 PASTA domain 441 503 1.9E-10 T 14-10-2018 IPR005543 PASTA domain Afer_0088 eb24b51e8070aaace0521334713c6933 520 Pfam PF03793 PASTA domain 373 435 1.9E-10 T 14-10-2018 IPR005543 PASTA domain Afer_0088 eb24b51e8070aaace0521334713c6933 520 SUPERFAMILY SSF56112 23 300 3.64E-80 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Afer_0088 eb24b51e8070aaace0521334713c6933 520 SMART SM00220 33 294 1.3E-68 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 Afer_0088 eb24b51e8070aaace0521334713c6933 520 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 152 164 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 Afer_1492 b49cfde04f36316374001ff36c6e7888 109 Gene3D G3DSA:3.30.300.130 4 88 8.1E-23 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Afer_1492 b49cfde04f36316374001ff36c6e7888 109 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 17 79 1.0E-12 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Afer_1492 b49cfde04f36316374001ff36c6e7888 109 SUPERFAMILY SSF117916 6 82 9.59E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Afer_1492 b49cfde04f36316374001ff36c6e7888 109 Pfam PF01106 NifU-like domain 13 80 2.3E-21 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 SUPERFAMILY SSF51230 513 588 4.23E-21 T 14-10-2018 IPR011053 Single hybrid motif Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 Pfam PF02785 Biotin carboxylase C-terminal domain 335 443 1.7E-36 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 Gene3D G3DSA:3.30.470.130 1 447 1.2E-187 T 14-10-2018 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 110 6.6E-43 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 544 561 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 Gene3D G3DSA:2.40.50.100 511 587 1.9E-22 T 14-10-2018 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 SMART SM00878 335 442 1.6E-52 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 SUPERFAMILY SSF51246 330 446 9.94E-39 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 SUPERFAMILY SSF56059 83 343 4.24E-66 T 14-10-2018 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 320 2.5E-74 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 Pfam PF00364 Biotin-requiring enzyme 521 587 5.1E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Afer_0730 63be36d0c118b99b6962eda44e8d9666 588 SUPERFAMILY SSF52440 2 113 1.29E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Afer_0082 5214acb4faed246123cf4de8cd171955 425 Pfam PF13393 Histidyl-tRNA synthetase 9 332 2.8E-41 T 14-10-2018 Afer_0082 5214acb4faed246123cf4de8cd171955 425 SUPERFAMILY SSF55681 5 339 5.38E-65 T 14-10-2018 Afer_0082 5214acb4faed246123cf4de8cd171955 425 Gene3D G3DSA:3.30.930.10 1 339 1.7E-89 T 14-10-2018 Afer_0082 5214acb4faed246123cf4de8cd171955 425 PIRSF PIRSF001549 1 400 4.2E-86 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Afer_0490 6288a137fead045006cd5b54cc95eb8b 222 Pfam PF08241 Methyltransferase domain 18 104 6.2E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Afer_0490 6288a137fead045006cd5b54cc95eb8b 222 Gene3D G3DSA:3.40.50.150 6 186 9.0E-37 T 14-10-2018 Afer_0490 6288a137fead045006cd5b54cc95eb8b 222 SUPERFAMILY SSF53335 8 170 2.19E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1573 00fee9309568b52484238501e2ea9cca 444 Pfam PF02653 Branched-chain amino acid transport system / permease component 85 428 1.3E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Afer_1078 a8521fc952ffb6bb7880f0c505794dc7 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 163 314 1.6E-25 T 14-10-2018 IPR000160 GGDEF domain Afer_1078 a8521fc952ffb6bb7880f0c505794dc7 329 Gene3D G3DSA:3.30.70.270 154 315 1.1E-32 T 14-10-2018 Afer_1078 a8521fc952ffb6bb7880f0c505794dc7 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 167 307 6.6E-23 T 14-10-2018 IPR000160 GGDEF domain Afer_1078 a8521fc952ffb6bb7880f0c505794dc7 329 SUPERFAMILY SSF55073 171 309 2.98E-30 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_1078 a8521fc952ffb6bb7880f0c505794dc7 329 SMART SM00267 152 315 7.1E-24 T 14-10-2018 IPR000160 GGDEF domain Afer_1402 c554f4b570c0fffae21d3b5d4ba0c2cc 372 Gene3D G3DSA:3.20.20.450 18 261 6.1E-48 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1402 c554f4b570c0fffae21d3b5d4ba0c2cc 372 SUPERFAMILY SSF141868 40 253 7.32E-46 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1402 c554f4b570c0fffae21d3b5d4ba0c2cc 372 Pfam PF00563 EAL domain 41 253 1.9E-40 T 14-10-2018 IPR001633 EAL domain Afer_1402 c554f4b570c0fffae21d3b5d4ba0c2cc 372 SMART SM00052 21 258 7.5E-19 T 14-10-2018 IPR001633 EAL domain Afer_1006 50c551765805463be96f9ec5182c6668 524 Pfam PF01966 HD domain 341 454 2.0E-8 T 14-10-2018 IPR006674 HD domain Afer_1006 50c551765805463be96f9ec5182c6668 524 Gene3D G3DSA:3.30.420.40 7 305 3.7E-71 T 14-10-2018 Afer_1006 50c551765805463be96f9ec5182c6668 524 Gene3D G3DSA:1.10.3210.10 321 515 9.6E-37 T 14-10-2018 Afer_1006 50c551765805463be96f9ec5182c6668 524 SUPERFAMILY SSF53067 134 309 3.69E-29 T 14-10-2018 Afer_1006 50c551765805463be96f9ec5182c6668 524 SUPERFAMILY SSF109604 326 506 4.0E-36 T 14-10-2018 Afer_1006 50c551765805463be96f9ec5182c6668 524 SUPERFAMILY SSF53067 7 125 1.1E-26 T 14-10-2018 Afer_1006 50c551765805463be96f9ec5182c6668 524 Gene3D G3DSA:3.30.420.150 111 298 3.7E-71 T 14-10-2018 Afer_1006 50c551765805463be96f9ec5182c6668 524 Pfam PF02541 Ppx/GppA phosphatase family 19 309 2.0E-49 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 Afer_1006 50c551765805463be96f9ec5182c6668 524 PIRSF PIRSF001267 3 500 1.1E-85 T 14-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 Gene3D G3DSA:3.40.50.2300 55 303 8.0E-62 T 14-10-2018 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 SUPERFAMILY SSF53822 60 330 2.9E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 47 6.6E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 SMART SM00354 1 70 2.0E-24 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 Gene3D G3DSA:3.40.50.2300 157 288 8.0E-62 T 14-10-2018 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 2 12 6.6E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 6.6E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 14-10-2018 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 Pfam PF13377 Periplasmic binding protein-like domain 166 328 1.2E-33 T 14-10-2018 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 Gene3D G3DSA:1.10.260.40 1 54 2.3E-21 T 14-10-2018 Afer_1332 6025a788f0bd4c97ae46ab59e074bbac 377 SUPERFAMILY SSF47413 1 58 3.09E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 SUPERFAMILY SSF56645 110 369 1.31E-54 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 233 341 4.6E-19 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 462 481 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 356 504 2.0E-37 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 Gene3D G3DSA:1.20.140.10 362 511 6.0E-41 T 14-10-2018 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 117 229 6.1E-24 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 SUPERFAMILY SSF47203 355 502 1.34E-39 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 Gene3D G3DSA:1.10.540.10 102 230 6.9E-28 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Afer_1770 86e609bb22d5997e85fa628762fc4877 512 Gene3D G3DSA:2.40.110.10 232 361 1.6E-29 T 14-10-2018 Afer_0708 27e01975bd5314afc9bdd9960bb19f98 263 SUPERFAMILY SSF56059 87 258 2.23E-19 T 14-10-2018 Afer_0708 27e01975bd5314afc9bdd9960bb19f98 263 Pfam PF02655 ATP-grasp domain 85 233 3.8E-9 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 Afer_0708 27e01975bd5314afc9bdd9960bb19f98 263 Gene3D G3DSA:3.30.470.80 157 261 2.9E-16 T 14-10-2018 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 Gene3D G3DSA:3.30.420.40 3 251 8.2E-109 T 14-10-2018 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 448 1.1E-63 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 PIRSF PIRSF000538 2 497 1.3E-179 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 Gene3D G3DSA:3.30.420.40 252 497 7.5E-87 T 14-10-2018 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 494 2.0E-213 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 2.0E-82 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 Hamap MF_00186 Glycerol kinase [glpK]. 2 495 56.553 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 SUPERFAMILY SSF53067 253 494 6.73E-83 T 14-10-2018 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Afer_0876 ba776e763fb012b9035309c08d8ded09 497 SUPERFAMILY SSF53067 5 253 6.65E-97 T 14-10-2018 Afer_0043 8d4f7640dac96938b26828a35596874b 135 Gene3D G3DSA:4.10.640.10 3 91 2.5E-26 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 PRINTS PR00974 Ribosomal protein S18 family signature 53 60 3.5E-13 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 PRINTS PR00974 Ribosomal protein S18 family signature 75 85 3.5E-13 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 PRINTS PR00974 Ribosomal protein S18 family signature 43 53 3.5E-13 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 PRINTS PR00974 Ribosomal protein S18 family signature 61 75 3.5E-13 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 TIGRFAM TIGR00165 S18: ribosomal protein bS18 21 86 6.3E-28 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 Pfam PF01084 Ribosomal protein S18 35 83 1.1E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 35 85 2.0E-16 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 ProSitePatterns PS00057 Ribosomal protein S18 signature. 36 59 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 SUPERFAMILY SSF46911 19 88 3.66E-25 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0043 8d4f7640dac96938b26828a35596874b 135 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 88 19.491 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0239 30c72cb47e0bfec00121b722d28b34a3 90 Pfam PF02467 Transcription factor WhiB 6 78 3.1E-22 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Afer_0239 30c72cb47e0bfec00121b722d28b34a3 90 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 84 17.28 T 14-10-2018 IPR003482 Transcription factor WhiB Afer_1286 a498f074fbf4ee2636a30889ab5b7a01 658 Pfam PF13193 AMP-binding enzyme C-terminal domain 536 614 1.7E-27 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_1286 a498f074fbf4ee2636a30889ab5b7a01 658 Pfam PF00501 AMP-binding enzyme 85 527 2.7E-97 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_1286 a498f074fbf4ee2636a30889ab5b7a01 658 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 35 645 4.3E-285 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 Afer_1286 a498f074fbf4ee2636a30889ab5b7a01 658 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 14-10-2018 IPR020845 AMP-binding, conserved site Afer_1286 a498f074fbf4ee2636a30889ab5b7a01 658 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 38 83 5.5E-16 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Afer_1286 a498f074fbf4ee2636a30889ab5b7a01 658 Gene3D G3DSA:3.30.300.30 523 655 1.7E-31 T 14-10-2018 Afer_1286 a498f074fbf4ee2636a30889ab5b7a01 658 SUPERFAMILY SSF56801 37 645 6.15E-185 T 14-10-2018 Afer_1286 a498f074fbf4ee2636a30889ab5b7a01 658 Gene3D G3DSA:3.40.50.12780 62 520 2.6E-112 T 14-10-2018 Afer_1126 ce437fbb7827a8a85e928603e2c6094e 262 SMART SM00422 15 89 1.0E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_1126 ce437fbb7827a8a85e928603e2c6094e 262 SUPERFAMILY SSF46955 30 90 1.33E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Afer_1126 ce437fbb7827a8a85e928603e2c6094e 262 Gene3D G3DSA:1.10.1660.10 30 207 1.9E-19 T 14-10-2018 Afer_1126 ce437fbb7827a8a85e928603e2c6094e 262 Pfam PF00376 MerR family regulatory protein 17 57 4.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_0345 178051959b2e0f7a9f0c143b27d11857 302 SUPERFAMILY SSF52540 6 227 1.93E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0345 178051959b2e0f7a9f0c143b27d11857 302 Gene3D G3DSA:3.40.50.300 1 237 5.5E-53 T 14-10-2018 Afer_0345 178051959b2e0f7a9f0c143b27d11857 302 Pfam PF00005 ABC transporter 23 157 6.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0345 178051959b2e0f7a9f0c143b27d11857 302 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0345 178051959b2e0f7a9f0c143b27d11857 302 SMART SM00382 32 206 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0746 93adb47c56e6266499c88b4c8e10d2fc 951 Pfam PF13641 Glycosyltransferase like family 2 5 223 2.9E-22 T 14-10-2018 Afer_0746 93adb47c56e6266499c88b4c8e10d2fc 951 Gene3D G3DSA:3.90.550.10 1 227 5.9E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0746 93adb47c56e6266499c88b4c8e10d2fc 951 SUPERFAMILY SSF53448 2 228 1.13E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0176 ac1f806f7a883ea29d5095ffc1bd2035 303 SUPERFAMILY SSF53850 90 293 2.79E-29 T 14-10-2018 Afer_0176 ac1f806f7a883ea29d5095ffc1bd2035 303 Gene3D G3DSA:3.40.190.10 164 269 3.1E-26 T 14-10-2018 Afer_0176 ac1f806f7a883ea29d5095ffc1bd2035 303 Gene3D G3DSA:1.10.10.10 1 83 4.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0176 ac1f806f7a883ea29d5095ffc1bd2035 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.7E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 Afer_0176 ac1f806f7a883ea29d5095ffc1bd2035 303 SUPERFAMILY SSF46785 2 110 8.43E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0176 ac1f806f7a883ea29d5095ffc1bd2035 303 Pfam PF03466 LysR substrate binding domain 88 292 1.1E-35 T 14-10-2018 IPR005119 LysR, substrate-binding Afer_0176 ac1f806f7a883ea29d5095ffc1bd2035 303 Gene3D G3DSA:3.40.190.10 91 278 3.1E-26 T 14-10-2018 Afer_1401 8997bd71f1c7f9f4603da64f992190d7 319 SMART SM00052 1 236 8.5E-11 T 14-10-2018 IPR001633 EAL domain Afer_1401 8997bd71f1c7f9f4603da64f992190d7 319 Gene3D G3DSA:3.20.20.450 5 239 1.3E-37 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1401 8997bd71f1c7f9f4603da64f992190d7 319 SUPERFAMILY SSF141868 21 227 7.98E-36 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1401 8997bd71f1c7f9f4603da64f992190d7 319 Pfam PF00563 EAL domain 34 223 1.1E-33 T 14-10-2018 IPR001633 EAL domain Afer_1542 022e42f80338f7f5f720426947d7fa25 432 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 25 340 7.9E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_1542 022e42f80338f7f5f720426947d7fa25 432 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 25 47 2.6E-8 T 14-10-2018 Afer_1542 022e42f80338f7f5f720426947d7fa25 432 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 2.6E-8 T 14-10-2018 Afer_1542 022e42f80338f7f5f720426947d7fa25 432 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 200 2.6E-8 T 14-10-2018 Afer_1542 022e42f80338f7f5f720426947d7fa25 432 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 118 136 1.0E-11 T 14-10-2018 Afer_1542 022e42f80338f7f5f720426947d7fa25 432 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 26 45 1.0E-11 T 14-10-2018 Afer_1542 022e42f80338f7f5f720426947d7fa25 432 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 175 193 1.0E-11 T 14-10-2018 Afer_1542 022e42f80338f7f5f720426947d7fa25 432 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 1.0E-11 T 14-10-2018 Afer_1542 022e42f80338f7f5f720426947d7fa25 432 SUPERFAMILY SSF51905 25 353 7.13E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1542 022e42f80338f7f5f720426947d7fa25 432 Gene3D G3DSA:3.50.50.100 22 421 5.6E-114 T 14-10-2018 Afer_0883 64fe61c4965a809288b39bb7e3aa22f8 203 Gene3D G3DSA:3.20.20.400 2 185 4.9E-45 T 14-10-2018 IPR035928 GlpP-like superfamily Afer_0883 64fe61c4965a809288b39bb7e3aa22f8 203 SUPERFAMILY SSF110391 25 180 3.66E-36 T 14-10-2018 IPR035928 GlpP-like superfamily Afer_0883 64fe61c4965a809288b39bb7e3aa22f8 203 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 8 179 4.6E-41 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 Afer_0883 64fe61c4965a809288b39bb7e3aa22f8 203 PIRSF PIRSF016897 2 185 8.3E-45 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 Afer_0592 bccb22a54cdeaf62190c81420e6b5972 300 SUPERFAMILY SSF103481 42 137 2.22E-10 T 14-10-2018 Afer_0592 bccb22a54cdeaf62190c81420e6b5972 300 SUPERFAMILY SSF103481 197 287 3.01E-9 T 14-10-2018 Afer_0592 bccb22a54cdeaf62190c81420e6b5972 300 Pfam PF00892 EamA-like transporter family 151 285 3.1E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_0592 bccb22a54cdeaf62190c81420e6b5972 300 Pfam PF00892 EamA-like transporter family 12 136 3.3E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 Gene3D G3DSA:1.10.1040.10 183 336 1.1E-57 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 Gene3D G3DSA:3.40.50.720 1 182 4.3E-42 T 14-10-2018 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 154 6.7E-32 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 SMART SM01350 184 335 1.8E-4 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 281 315 3.5E-5 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 184 213 1.6E-9 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 SUPERFAMILY SSF51735 1 160 2.18E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 335 6.3E-119 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 274 286 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 SUPERFAMILY SSF48179 182 325 1.29E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 23 4.9E-14 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Afer_1093 04c691f28d41ea3f60c4c366b5472e74 337 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 173 201 4.9E-14 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 Afer_1820 542a3f1e41d4d4c8c2f005a302e1e6f7 305 Pfam PF13602 Zinc-binding dehydrogenase 192 301 4.8E-15 T 14-10-2018 Afer_1820 542a3f1e41d4d4c8c2f005a302e1e6f7 305 SUPERFAMILY SSF50129 1 151 4.57E-37 T 14-10-2018 IPR011032 GroES-like superfamily Afer_1820 542a3f1e41d4d4c8c2f005a302e1e6f7 305 Gene3D G3DSA:3.90.180.10 8 300 4.9E-76 T 14-10-2018 Afer_1820 542a3f1e41d4d4c8c2f005a302e1e6f7 305 SMART SM00829 10 301 6.6E-15 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Afer_1820 542a3f1e41d4d4c8c2f005a302e1e6f7 305 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 90 5.4E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Afer_1820 542a3f1e41d4d4c8c2f005a302e1e6f7 305 Gene3D G3DSA:3.40.50.720 129 252 4.9E-76 T 14-10-2018 Afer_1820 542a3f1e41d4d4c8c2f005a302e1e6f7 305 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 146 167 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 Afer_1820 542a3f1e41d4d4c8c2f005a302e1e6f7 305 SUPERFAMILY SSF51735 118 268 1.67E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1932 09e4f8b803f964b80d8de5a6f362a418 312 SMART SM00382 23 201 3.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1932 09e4f8b803f964b80d8de5a6f362a418 312 Pfam PF00005 ABC transporter 18 154 2.5E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1932 09e4f8b803f964b80d8de5a6f362a418 312 Gene3D G3DSA:3.40.50.300 16 230 8.2E-54 T 14-10-2018 Afer_1932 09e4f8b803f964b80d8de5a6f362a418 312 SUPERFAMILY SSF52540 5 230 8.04E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1932 09e4f8b803f964b80d8de5a6f362a418 312 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1137 9036e61ac97c89af068bd286b3d4f6a1 271 Hamap MF_00361 NAD kinase [nadK]. 1 264 28.407 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Afer_1137 9036e61ac97c89af068bd286b3d4f6a1 271 Pfam PF01513 ATP-NAD kinase 40 246 1.1E-46 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Afer_1137 9036e61ac97c89af068bd286b3d4f6a1 271 SUPERFAMILY SSF111331 2 265 1.13E-66 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Afer_1137 9036e61ac97c89af068bd286b3d4f6a1 271 Gene3D G3DSA:3.40.50.10330 12 257 3.4E-77 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Afer_1137 9036e61ac97c89af068bd286b3d4f6a1 271 Gene3D G3DSA:2.60.200.30 109 241 3.4E-77 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 Afer_0700 0091c50bd7b21dd368cc06090309c7d1 421 PIRSF PIRSF000521 14 118 4.5E-9 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0700 0091c50bd7b21dd368cc06090309c7d1 421 PIRSF PIRSF000521 110 417 1.0E-38 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0700 0091c50bd7b21dd368cc06090309c7d1 421 Gene3D G3DSA:3.40.640.10 48 312 5.8E-141 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0700 0091c50bd7b21dd368cc06090309c7d1 421 SUPERFAMILY SSF53383 8 414 1.12E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0700 0091c50bd7b21dd368cc06090309c7d1 421 Pfam PF00202 Aminotransferase class-III 8 412 2.0E-113 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0700 0091c50bd7b21dd368cc06090309c7d1 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 230 267 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0700 0091c50bd7b21dd368cc06090309c7d1 421 Gene3D G3DSA:3.90.1150.10 9 411 5.8E-141 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1954 2bd56449285659a792d6f8f8d290b7ad 89 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 9 81 2.6E-19 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1954 2bd56449285659a792d6f8f8d290b7ad 89 SUPERFAMILY SSF82697 6 83 5.62E-17 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1954 2bd56449285659a792d6f8f8d290b7ad 89 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 15 81 4.0E-8 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1954 2bd56449285659a792d6f8f8d290b7ad 89 Gene3D G3DSA:3.30.1280.10 2 84 4.7E-16 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1954 2bd56449285659a792d6f8f8d290b7ad 89 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 6 83 16.397 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1954 2bd56449285659a792d6f8f8d290b7ad 89 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 8 81 3.7E-11 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 ProSitePatterns PS01134 FtsZ protein signature 1. 41 75 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 11 171 5.3E-40 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 Gene3D G3DSA:3.30.1330.20 218 327 5.2E-39 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 PRINTS PR00423 Cell division protein FtsZ signature 186 208 9.1E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 PRINTS PR00423 Cell division protein FtsZ signature 95 115 9.1E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 PRINTS PR00423 Cell division protein FtsZ signature 123 144 9.1E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 PRINTS PR00423 Cell division protein FtsZ signature 209 230 9.1E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 6 322 3.6E-128 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 Gene3D G3DSA:3.40.50.1440 1 217 3.2E-82 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 6 355 38.871 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 Pfam PF12327 FtsZ family, C-terminal domain 219 312 1.5E-33 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 SMART SM00864 10 202 9.8E-114 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 SUPERFAMILY SSF52490 11 205 2.62E-69 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 SMART SM00865 204 320 1.4E-48 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 ProSitePatterns PS01135 FtsZ protein signature 2. 94 115 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 Afer_1241 201c5e83fdcb1cd3ed286a76c97a66a5 362 SUPERFAMILY SSF55307 201 314 3.66E-41 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 Afer_0469 8d0777a14c7fdc61fe8a2cdf6d3a3739 294 Pfam PF00494 Squalene/phytoene synthase 16 268 1.9E-66 T 14-10-2018 Afer_0469 8d0777a14c7fdc61fe8a2cdf6d3a3739 294 SUPERFAMILY SSF48576 10 280 5.76E-76 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Afer_0469 8d0777a14c7fdc61fe8a2cdf6d3a3739 294 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 156 181 - T 14-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 Afer_0469 8d0777a14c7fdc61fe8a2cdf6d3a3739 294 Gene3D G3DSA:1.10.600.10 2 258 2.9E-82 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 SMART SM00662 19 225 1.9E-79 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 217 9.5E-23 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 Gene3D G3DSA:1.10.150.20 237 312 1.1E-26 T 14-10-2018 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 34.291 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 SUPERFAMILY SSF56553 49 169 4.84E-41 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 61 151 7.4E-23 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 Gene3D G3DSA:2.170.120.12 49 168 1.1E-79 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 310 3.1E-104 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 SUPERFAMILY SSF55257 15 223 1.86E-27 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 302 2.2E-22 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 SUPERFAMILY SSF47789 247 309 5.89E-21 T 14-10-2018 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 Gene3D G3DSA:3.30.1360.10 19 217 1.1E-79 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0426 4bc2ba98251c18aaf9955617f0401345 312 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 309 9.0E-14 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_1170 d70532189f10295647fa1e1dd6e4d53f 334 SUPERFAMILY SSF49899 69 269 5.38E-20 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Afer_1170 d70532189f10295647fa1e1dd6e4d53f 334 Pfam PF01828 Peptidase A4 family 72 275 1.7E-16 T 14-10-2018 IPR000250 Peptidase G1 GO:0004190|GO:0006508 Afer_1170 d70532189f10295647fa1e1dd6e4d53f 334 Gene3D G3DSA:2.60.120.700 69 278 9.5E-15 T 14-10-2018 IPR038656 Peptidase G1 superfamily Afer_0228 0b1edabd25d5b2a9757e953744cfcd4b 152 Gene3D G3DSA:3.30.1330.40 2 150 3.0E-53 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Afer_0228 0b1edabd25d5b2a9757e953744cfcd4b 152 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 6 145 7.0E-27 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like Afer_0228 0b1edabd25d5b2a9757e953744cfcd4b 152 SUPERFAMILY SSF55298 2 150 6.75E-46 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Afer_0264 edc165cedfaf27b81af273ad5d756407 240 Gene3D G3DSA:3.40.50.10320 3 234 6.0E-68 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Afer_0264 edc165cedfaf27b81af273ad5d756407 240 Pfam PF02585 GlcNAc-PI de-N-acetylase 13 142 6.0E-27 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Afer_0264 edc165cedfaf27b81af273ad5d756407 240 SUPERFAMILY SSF102588 9 219 1.7E-48 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Afer_0535 f7f5f6106ed0a76bb2b5c838efd9fa2e 240 PIRSF PIRSF036427 4 240 8.0E-54 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 Afer_0535 f7f5f6106ed0a76bb2b5c838efd9fa2e 240 SUPERFAMILY SSF53790 5 236 2.22E-37 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Afer_0535 f7f5f6106ed0a76bb2b5c838efd9fa2e 240 Gene3D G3DSA:3.40.1010.10 5 135 1.1E-29 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Afer_0535 f7f5f6106ed0a76bb2b5c838efd9fa2e 240 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 6 234 3.0E-50 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 Afer_0535 f7f5f6106ed0a76bb2b5c838efd9fa2e 240 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 7 216 3.0E-37 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Afer_0535 f7f5f6106ed0a76bb2b5c838efd9fa2e 240 Gene3D G3DSA:3.30.950.10 137 238 3.8E-5 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Afer_1135 08d4ca7a33535ac2326428a1d6a0aca0 535 TIGRFAM TIGR00337 PyrG: CTP synthase 2 526 2.1E-232 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Afer_1135 08d4ca7a33535ac2326428a1d6a0aca0 535 Hamap MF_01227 CTP synthase [pyrG]. 2 531 50.286 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Afer_1135 08d4ca7a33535ac2326428a1d6a0aca0 535 Gene3D G3DSA:3.40.50.880 286 534 2.9E-94 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1135 08d4ca7a33535ac2326428a1d6a0aca0 535 Pfam PF00117 Glutamine amidotransferase class-I 302 525 5.9E-47 T 14-10-2018 IPR017926 Glutamine amidotransferase Afer_1135 08d4ca7a33535ac2326428a1d6a0aca0 535 SUPERFAMILY SSF52540 2 266 1.2E-116 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1135 08d4ca7a33535ac2326428a1d6a0aca0 535 SUPERFAMILY SSF52317 289 533 4.88E-77 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1135 08d4ca7a33535ac2326428a1d6a0aca0 535 Gene3D G3DSA:3.40.50.300 1 285 2.0E-128 T 14-10-2018 Afer_1135 08d4ca7a33535ac2326428a1d6a0aca0 535 Pfam PF06418 CTP synthase N-terminus 3 266 5.5E-121 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 215 1.9E-91 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 PIRSF PIRSF000709 2 123 5.0E-7 T 14-10-2018 Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 PIRSF PIRSF000709 136 210 3.4 T 14-10-2018 Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 216 37.787 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 SMART SM00855 3 189 1.9E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 126 1.4E-29 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 Gene3D G3DSA:3.40.50.1240 1 217 2.8E-73 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Afer_1959 52b4b4a4140c4743d866d79fb2f3fa75 217 SUPERFAMILY SSF53254 3 215 1.11E-66 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Afer_0806 7284bc3b52e6e8217c8e456db94b89c8 273 SUPERFAMILY SSF53790 2 252 7.33E-54 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Afer_0806 7284bc3b52e6e8217c8e456db94b89c8 273 Gene3D G3DSA:3.30.950.10 111 234 3.7E-35 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Afer_0806 7284bc3b52e6e8217c8e456db94b89c8 273 Gene3D G3DSA:3.40.1010.10 3 110 6.0E-21 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Afer_0806 7284bc3b52e6e8217c8e456db94b89c8 273 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 210 5.6E-36 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Afer_0806 7284bc3b52e6e8217c8e456db94b89c8 273 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 220 236 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 SUPERFAMILY SSF51735 99 281 6.26E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 SUPERFAMILY SSF55021 446 520 2.12E-15 T 14-10-2018 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 143 170 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 521 3.3E-187 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 Gene3D G3DSA:3.40.50.720 4 290 1.3E-118 T 14-10-2018 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 Gene3D G3DSA:3.40.50.720 93 282 1.3E-118 T 14-10-2018 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 Gene3D G3DSA:3.30.1330.90 314 447 7.9E-32 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 SUPERFAMILY SSF143548 319 444 2.09E-24 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 312 9.5E-37 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 Gene3D G3DSA:3.30.70.260 449 522 2.2E-16 T 14-10-2018 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 106 280 3.2E-61 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Afer_1530 f61912a86f7ff619ee832b301a6dce6f 527 SUPERFAMILY SSF52283 1 133 6.24E-37 T 14-10-2018 Afer_1027 3ed991f89fbdd75f0aa47949bd8871a0 539 Pfam PF00501 AMP-binding enzyme 23 431 8.2E-92 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_1027 3ed991f89fbdd75f0aa47949bd8871a0 539 ProSitePatterns PS00455 Putative AMP-binding domain signature. 185 196 - T 14-10-2018 IPR020845 AMP-binding, conserved site Afer_1027 3ed991f89fbdd75f0aa47949bd8871a0 539 Gene3D G3DSA:3.30.300.310 427 533 1.4E-28 T 14-10-2018 Afer_1027 3ed991f89fbdd75f0aa47949bd8871a0 539 SUPERFAMILY SSF56801 14 529 9.55E-143 T 14-10-2018 Afer_1027 3ed991f89fbdd75f0aa47949bd8871a0 539 Pfam PF13193 AMP-binding enzyme C-terminal domain 440 516 1.5E-15 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_1027 3ed991f89fbdd75f0aa47949bd8871a0 539 Gene3D G3DSA:3.40.50.12780 7 424 9.0E-111 T 14-10-2018 Afer_0667 f74e4905255c5c2f3f008bdc710634a9 273 Pfam PF00005 ABC transporter 42 175 7.9E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0667 f74e4905255c5c2f3f008bdc710634a9 273 SMART SM00382 49 238 1.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0667 f74e4905255c5c2f3f008bdc710634a9 273 SUPERFAMILY SSF52540 39 247 3.45E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0667 f74e4905255c5c2f3f008bdc710634a9 273 Gene3D G3DSA:3.40.50.300 21 249 2.3E-60 T 14-10-2018 Afer_0667 f74e4905255c5c2f3f008bdc710634a9 273 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1307 ebfd83312971c1f0137379c8ec33cfd5 259 SUPERFAMILY SSF53474 6 253 6.63E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1307 ebfd83312971c1f0137379c8ec33cfd5 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 2.6E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_1307 ebfd83312971c1f0137379c8ec33cfd5 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 87 100 2.6E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_1307 ebfd83312971c1f0137379c8ec33cfd5 259 PRINTS PR00111 Alpha/beta hydrolase fold signature 101 114 2.6E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_1307 ebfd83312971c1f0137379c8ec33cfd5 259 Pfam PF00561 alpha/beta hydrolase fold 17 242 6.2E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_1307 ebfd83312971c1f0137379c8ec33cfd5 259 Gene3D G3DSA:3.40.50.1820 2 254 1.0E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1616 2e4f797366ae894e30bf9116007dff79 135 Pfam PF01230 HIT domain 13 100 9.3E-16 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Afer_1616 2e4f797366ae894e30bf9116007dff79 135 SUPERFAMILY SSF54197 2 119 2.17E-25 T 14-10-2018 IPR036265 HIT-like superfamily Afer_1616 2e4f797366ae894e30bf9116007dff79 135 Gene3D G3DSA:3.30.428.10 1 132 6.9E-25 T 14-10-2018 IPR036265 HIT-like superfamily Afer_1915 5c3f8c9f8e27db502ec5053cc9db0edb 325 Pfam PF10103 Zincin-like metallopeptidase 36 319 3.9E-49 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 Afer_1915 5c3f8c9f8e27db502ec5053cc9db0edb 325 TIGRFAM TIGR03883 DUF2342_F420: uncharacterized protein, coenzyme F420 biosynthesis associated 31 322 1.8E-53 T 14-10-2018 IPR022454 Conserved hypothetical protein CHP03883, F420 biosynthesis associated Afer_1915 5c3f8c9f8e27db502ec5053cc9db0edb 325 Gene3D G3DSA:1.20.150.30 26 111 1.3E-6 T 14-10-2018 Afer_1915 5c3f8c9f8e27db502ec5053cc9db0edb 325 SUPERFAMILY SSF55486 27 322 1.76E-54 T 14-10-2018 Afer_1915 5c3f8c9f8e27db502ec5053cc9db0edb 325 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 87 322 1.9E-47 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 Afer_0157 67fdaefc4cdb7f0d39c9ba8b3e7ca48a 246 Pfam PF01311 Bacterial export proteins, family 1 11 232 2.4E-25 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Afer_0157 67fdaefc4cdb7f0d39c9ba8b3e7ca48a 246 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 75 94 3.9E-9 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Afer_0157 67fdaefc4cdb7f0d39c9ba8b3e7ca48a 246 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 192 211 3.9E-9 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Afer_0157 67fdaefc4cdb7f0d39c9ba8b3e7ca48a 246 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 170 192 3.9E-9 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 Afer_1130 e141cfe66b5909789b15f9efa453dd3c 491 Pfam PF07690 Major Facilitator Superfamily 19 408 2.5E-52 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1130 e141cfe66b5909789b15f9efa453dd3c 491 Gene3D G3DSA:1.20.1720.10 13 212 7.1E-50 T 14-10-2018 Afer_1130 e141cfe66b5909789b15f9efa453dd3c 491 Gene3D G3DSA:1.20.1250.20 259 474 1.5E-16 T 14-10-2018 Afer_1130 e141cfe66b5909789b15f9efa453dd3c 491 SUPERFAMILY SSF103473 7 474 9.94E-61 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1911 b50aa8e44e721da246b4bc4ea01243cd 268 Pfam PF00809 Pterin binding enzyme 10 245 5.1E-78 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_1911 b50aa8e44e721da246b4bc4ea01243cd 268 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 9 24 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_1911 b50aa8e44e721da246b4bc4ea01243cd 268 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 9 259 7.1E-86 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 Afer_1911 b50aa8e44e721da246b4bc4ea01243cd 268 SUPERFAMILY SSF51717 6 262 3.01E-86 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_1911 b50aa8e44e721da246b4bc4ea01243cd 268 Gene3D G3DSA:3.20.20.20 1 266 7.5E-96 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_1911 b50aa8e44e721da246b4bc4ea01243cd 268 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 43 56 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0666 6d9ed46f051accb6eb2a09126b097350 271 SUPERFAMILY SSF161098 69 250 3.01E-32 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0666 6d9ed46f051accb6eb2a09126b097350 271 Gene3D G3DSA:1.10.3720.10 67 261 8.3E-27 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0666 6d9ed46f051accb6eb2a09126b097350 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 256 8.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 PIRSF PIRSF006092 1 157 1.3E-37 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 80 153 1.1E-15 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 25.559 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 Gene3D G3DSA:3.10.50.30 76 158 1.7E-14 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 Gene3D G3DSA:1.10.287.180 1 75 5.4E-24 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 Pfam PF03449 Transcription elongation factor, N-terminal 6 74 1.1E-24 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 SUPERFAMILY SSF54534 80 153 2.75E-13 T 14-10-2018 Afer_1535 747dcf95ef0960f7657369071bbb7e07 160 SUPERFAMILY SSF46557 5 76 7.59E-22 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 Afer_1095 05b397b490ade70b7cbd9826dc4d459e 395 PIRSF PIRSF001413 3 395 1.1E-142 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Afer_1095 05b397b490ade70b7cbd9826dc4d459e 395 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 11 391 47.741 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Afer_1095 05b397b490ade70b7cbd9826dc4d459e 395 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 89 103 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Afer_1095 05b397b490ade70b7cbd9826dc4d459e 395 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 60 378 1.5E-48 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Afer_1095 05b397b490ade70b7cbd9826dc4d459e 395 SUPERFAMILY SSF53686 12 390 1.31E-131 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Afer_1095 05b397b490ade70b7cbd9826dc4d459e 395 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 16 390 6.2E-164 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Afer_1095 05b397b490ade70b7cbd9826dc4d459e 395 Gene3D G3DSA:3.40.50.1100 63 383 6.5E-165 T 14-10-2018 Afer_1095 05b397b490ade70b7cbd9826dc4d459e 395 Gene3D G3DSA:3.40.50.1100 19 214 6.5E-165 T 14-10-2018 Afer_0879 ab44c88e03bbc7dda6f456e44e023680 127 Pfam PF03610 PTS system fructose IIA component 1 110 6.9E-12 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 Afer_0879 ab44c88e03bbc7dda6f456e44e023680 127 Gene3D G3DSA:3.40.50.510 1 122 4.5E-24 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Afer_0879 ab44c88e03bbc7dda6f456e44e023680 127 SUPERFAMILY SSF53062 1 118 1.12E-17 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 Afer_0729 74e614fb01d067800bc6e7882bc16c31 220 Pfam PF00881 Nitroreductase family 7 173 2.6E-17 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Afer_0729 74e614fb01d067800bc6e7882bc16c31 220 SUPERFAMILY SSF55469 3 195 9.29E-30 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Afer_0729 74e614fb01d067800bc6e7882bc16c31 220 Gene3D G3DSA:3.40.109.10 2 203 2.5E-31 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Afer_0430 9bea230ea4fbbdaf50fa5d8cd8d03f24 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 4.8E-40 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 Afer_0430 9bea230ea4fbbdaf50fa5d8cd8d03f24 130 Gene3D G3DSA:3.30.230.10 1 130 3.1E-45 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_0430 9bea230ea4fbbdaf50fa5d8cd8d03f24 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 30.301 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid Afer_0430 9bea230ea4fbbdaf50fa5d8cd8d03f24 130 SUPERFAMILY SSF54211 6 130 8.72E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_0430 9bea230ea4fbbdaf50fa5d8cd8d03f24 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 SUPERFAMILY SSF47413 5 62 3.75E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 Gene3D G3DSA:3.40.50.2300 173 339 8.4E-62 T 14-10-2018 Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 3.3E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 Gene3D G3DSA:3.40.50.2300 94 335 8.4E-62 T 14-10-2018 Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 Gene3D G3DSA:1.10.260.40 1 63 3.1E-18 T 14-10-2018 Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 Pfam PF13377 Periplasmic binding protein-like domain 184 344 8.0E-38 T 14-10-2018 Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 SUPERFAMILY SSF53822 89 346 1.96E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Afer_0169 eab45c28c6fe3c7ea85c0b6b2382af77 377 SMART SM00354 5 75 1.9E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Pfam PF04998 RNA polymerase Rpb1, domain 5 839 1197 1.6E-63 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Gene3D G3DSA:1.10.274.100 584 652 5.0E-17 T 14-10-2018 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Gene3D G3DSA:1.10.1790.20 1019 1196 1.7E-65 T 14-10-2018 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 9 1249 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Gene3D G3DSA:1.10.274.100 653 726 8.1E-13 T 14-10-2018 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 436 5.4E-80 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Gene3D G3DSA:1.10.132.30 727 863 9.6E-52 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Pfam PF00623 RNA polymerase Rpb1, domain 2 438 479 1.6E-7 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Pfam PF00623 RNA polymerase Rpb1, domain 2 486 579 2.4E-27 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 SMART SM00663 329 608 7.8E-171 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Gene3D G3DSA:2.40.50.100 1035 1097 1.7E-65 T 14-10-2018 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Pfam PF05000 RNA polymerase Rpb1, domain 4 759 824 8.5E-10 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Gene3D G3DSA:1.10.40.90 468 510 3.6E-23 T 14-10-2018 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1259 17.188 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Pfam PF04983 RNA polymerase Rpb1, domain 3 583 730 1.0E-17 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 Gene3D G3DSA:1.10.150.390 1198 1258 6.6E-28 T 14-10-2018 Afer_0392 fa920b69209d21ed3e2be9a2d003a53d 1287 SUPERFAMILY SSF64484 6 1249 0.0 T 14-10-2018 Afer_0045 a3cb4e33bd28813f313951a9fb12cd88 112 SUPERFAMILY SSF54995 1 96 6.15E-27 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0045 a3cb4e33bd28813f313951a9fb12cd88 112 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 18.472 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 Afer_0045 a3cb4e33bd28813f313951a9fb12cd88 112 Gene3D G3DSA:3.30.70.60 1 100 1.4E-27 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 Afer_0045 a3cb4e33bd28813f313951a9fb12cd88 112 Pfam PF01250 Ribosomal protein S6 4 92 8.1E-24 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0045 a3cb4e33bd28813f313951a9fb12cd88 112 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 2.0E-17 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0525 4c8ca7ba932f44a50686f4bc132d7f1c 463 PIRSF PIRSF006446 3 460 2.1E-145 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Afer_0525 4c8ca7ba932f44a50686f4bc132d7f1c 463 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 444 1.0E-166 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 Afer_0572 259f9accd7e4cefa4b38111c2481367f 384 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 13 379 2.4E-104 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Afer_0572 259f9accd7e4cefa4b38111c2481367f 384 Gene3D G3DSA:3.40.50.10350 13 371 5.1E-113 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold Afer_0572 259f9accd7e4cefa4b38111c2481367f 384 PIRSF PIRSF006078 12 383 3.8E-110 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Afer_0572 259f9accd7e4cefa4b38111c2481367f 384 Pfam PF02595 Glycerate kinase family 14 382 2.8E-117 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 Afer_0572 259f9accd7e4cefa4b38111c2481367f 384 SUPERFAMILY SSF110738 13 382 4.45E-103 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 Afer_0572 259f9accd7e4cefa4b38111c2481367f 384 Gene3D G3DSA:3.90.1510.10 53 285 5.1E-113 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 Afer_1792 c8660a565f9f31668e9ad53e44f660f2 329 SUPERFAMILY SSF56655 8 320 9.77E-101 T 14-10-2018 Afer_1792 c8660a565f9f31668e9ad53e44f660f2 329 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 10 322 3.8E-107 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Afer_1792 c8660a565f9f31668e9ad53e44f660f2 329 Gene3D G3DSA:3.30.540.10 14 317 8.4E-124 T 14-10-2018 Afer_1792 c8660a565f9f31668e9ad53e44f660f2 329 Gene3D G3DSA:3.40.190.90 130 291 8.4E-124 T 14-10-2018 Afer_1792 c8660a565f9f31668e9ad53e44f660f2 329 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 10 317 2.8E-132 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Afer_1792 c8660a565f9f31668e9ad53e44f660f2 329 PIRSF PIRSF004532 8 328 1.9E-132 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 Gene3D G3DSA:3.30.70.1450 136 219 4.2E-16 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 Gene3D G3DSA:3.40.50.720 2 133 4.1E-36 T 14-10-2018 Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 SUPERFAMILY SSF51735 1 144 7.27E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 Pfam PF02254 TrkA-N domain 3 118 9.0E-27 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 Pfam PF02080 TrkA-C domain 149 211 2.2E-12 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 9.6E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 9.6E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 9.6E-7 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Afer_1924 8e24e4d3bf17dde422178f2b7efe5354 231 SUPERFAMILY SSF116726 134 204 9.94E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Afer_1791 f2836195ce04bc583e7a8fbed5f6b820 556 Pfam PF01642 Methylmalonyl-CoA mutase 23 549 7.9E-213 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_1791 f2836195ce04bc583e7a8fbed5f6b820 556 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 21 555 1.1E-213 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_1791 f2836195ce04bc583e7a8fbed5f6b820 556 SUPERFAMILY SSF51703 8 551 6.8E-197 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_1791 f2836195ce04bc583e7a8fbed5f6b820 556 Gene3D G3DSA:3.20.20.240 3 556 3.8E-229 T 14-10-2018 Afer_0135 10aca4b8c0023c0b756297b07cd58519 144 Pfam PF00460 Flagella basal body rod protein 7 32 9.2E-6 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Afer_0135 10aca4b8c0023c0b756297b07cd58519 144 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 89 140 4.8E-7 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Afer_0196 e9194e8ae9b52c6b45c7ba6a5b7b1ac7 695 SMART SM00944 50 194 1.4E-15 T 14-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 Afer_0196 e9194e8ae9b52c6b45c7ba6a5b7b1ac7 695 Pfam PF09286 Pro-kumamolisin, activation domain 56 193 2.9E-8 T 14-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 Afer_0196 e9194e8ae9b52c6b45c7ba6a5b7b1ac7 695 SUPERFAMILY SSF54897 49 201 6.46E-17 T 14-10-2018 Afer_0196 e9194e8ae9b52c6b45c7ba6a5b7b1ac7 695 SUPERFAMILY SSF52743 228 681 3.14E-31 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Afer_0845 36128de16020077369bc4e39a4b29c58 620 SUPERFAMILY SSF46600 191 243 3.79E-13 T 14-10-2018 IPR036876 UVR domain superfamily Afer_0845 36128de16020077369bc4e39a4b29c58 620 Gene3D G3DSA:3.30.420.340 381 544 5.0E-49 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily Afer_0845 36128de16020077369bc4e39a4b29c58 620 Gene3D G3DSA:1.10.150.20 545 604 7.7E-14 T 14-10-2018 Afer_0845 36128de16020077369bc4e39a4b29c58 620 SUPERFAMILY SSF82771 14 97 3.66E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Afer_0845 36128de16020077369bc4e39a4b29c58 620 Pfam PF01541 GIY-YIG catalytic domain 15 90 1.2E-6 T 14-10-2018 IPR000305 GIY-YIG endonuclease Afer_0845 36128de16020077369bc4e39a4b29c58 620 Pfam PF02151 UvrB/uvrC motif 206 238 2.5E-10 T 14-10-2018 IPR001943 UVR domain GO:0005515 Afer_0845 36128de16020077369bc4e39a4b29c58 620 Gene3D G3DSA:3.40.1440.10 3 99 1.9E-29 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Afer_0845 36128de16020077369bc4e39a4b29c58 620 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 585 5.9E-146 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Afer_0845 36128de16020077369bc4e39a4b29c58 620 Gene3D G3DSA:4.10.860.10 203 240 1.1E-5 T 14-10-2018 Afer_0845 36128de16020077369bc4e39a4b29c58 620 Hamap MF_00203 UvrABC system protein C [uvrC]. 1 602 26.469 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 Afer_0845 36128de16020077369bc4e39a4b29c58 620 SMART SM00465 13 95 1.8E-21 T 14-10-2018 IPR000305 GIY-YIG endonuclease Afer_0845 36128de16020077369bc4e39a4b29c58 620 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 388 538 7.7E-43 T 14-10-2018 IPR001162 UvrC family homology region Afer_0845 36128de16020077369bc4e39a4b29c58 620 SUPERFAMILY SSF47781 518 604 3.81E-16 T 14-10-2018 IPR010994 RuvA domain 2-like Afer_0257 b67b4d0a9cd3da19aa6926cad6894191 262 SUPERFAMILY SSF51735 8 243 4.3E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0257 b67b4d0a9cd3da19aa6926cad6894191 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 243 2.7E-49 T 14-10-2018 Afer_0257 b67b4d0a9cd3da19aa6926cad6894191 262 Gene3D G3DSA:3.40.50.720 6 248 1.7E-52 T 14-10-2018 Afer_0257 b67b4d0a9cd3da19aa6926cad6894191 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0257 b67b4d0a9cd3da19aa6926cad6894191 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0257 b67b4d0a9cd3da19aa6926cad6894191 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0257 b67b4d0a9cd3da19aa6926cad6894191 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0257 b67b4d0a9cd3da19aa6926cad6894191 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.1E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 Pfam PF13180 PDZ domain 296 386 1.7E-15 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 Gene3D G3DSA:2.40.10.120 59 281 2.5E-58 T 14-10-2018 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 SUPERFAMILY SSF50494 59 278 2.23E-48 T 14-10-2018 IPR009003 Peptidase S1, PA clan Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 SUPERFAMILY SSF50156 294 389 4.47E-20 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 SMART SM00228 295 377 2.1E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 PRINTS PR00834 HtrA/DegQ protease family signature 335 347 6.5E-31 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 PRINTS PR00834 HtrA/DegQ protease family signature 113 125 6.5E-31 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 PRINTS PR00834 HtrA/DegQ protease family signature 135 155 6.5E-31 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 PRINTS PR00834 HtrA/DegQ protease family signature 177 201 6.5E-31 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 PRINTS PR00834 HtrA/DegQ protease family signature 222 239 6.5E-31 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 PRINTS PR00834 HtrA/DegQ protease family signature 244 261 6.5E-31 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 Pfam PF13365 Trypsin-like peptidase domain 104 251 9.5E-31 T 14-10-2018 Afer_0721 59ed9167ae309c1ae73b014a122b01b2 392 Gene3D G3DSA:2.30.42.10 295 392 2.6E-25 T 14-10-2018 Afer_0948 1696328808b950364290f9b7165fbb50 546 Gene3D G3DSA:1.20.1740.10 10 457 9.7E-71 T 14-10-2018 Afer_0948 1696328808b950364290f9b7165fbb50 546 Pfam PF13520 Amino acid permease 16 418 1.9E-46 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_0948 1696328808b950364290f9b7165fbb50 546 PIRSF PIRSF006060 455 527 32.0 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_0948 1696328808b950364290f9b7165fbb50 546 PIRSF PIRSF006060 1 480 1.8E-75 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 Pfam PF00285 Citrate synthase, C-terminal domain 46 405 2.0E-134 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 Gene3D G3DSA:1.10.230.10 266 371 8.4E-140 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 SUPERFAMILY SSF48256 9 422 3.14E-149 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 15 416 3.9E-160 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 Gene3D G3DSA:1.10.580.10 54 405 8.4E-140 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 ProSitePatterns PS00480 Citrate synthase signature. 299 311 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 PIRSF PIRSF001369 37 422 1.1E-148 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 PRINTS PR00143 Citrate synthase signature 163 176 6.5E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 PRINTS PR00143 Citrate synthase signature 292 312 6.5E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 PRINTS PR00143 Citrate synthase signature 239 267 6.5E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 PRINTS PR00143 Citrate synthase signature 374 388 6.5E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 PRINTS PR00143 Citrate synthase signature 354 370 6.5E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Afer_1835 60bd995b80fbf5c14c1f8eb8e5ec21fd 422 PRINTS PR00143 Citrate synthase signature 217 232 6.5E-49 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 Afer_0156 75410a2268d59d8f4118157b4c969733 91 Pfam PF01313 Bacterial export proteins, family 3 6 77 2.0E-26 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Afer_0156 75410a2268d59d8f4118157b4c969733 91 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 5.1E-27 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 Afer_0156 75410a2268d59d8f4118157b4c969733 91 PIRSF PIRSF004669 1 89 2.2E-28 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Afer_0156 75410a2268d59d8f4118157b4c969733 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 6.0E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Afer_0156 75410a2268d59d8f4118157b4c969733 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 6.0E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Afer_0156 75410a2268d59d8f4118157b4c969733 91 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 6.0E-19 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 Gene3D G3DSA:2.60.40.10 35 125 3.6E-6 T 14-10-2018 IPR013783 Immunoglobulin-like fold Afer_0170 118a8b17ed700141897caf137b92c5d2 611 Pfam PF01229 Glycosyl hydrolases family 39 179 363 3.7E-52 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 Pfam PF01229 Glycosyl hydrolases family 39 381 601 1.7E-7 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 SUPERFAMILY SSF51445 168 467 4.85E-66 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_0170 118a8b17ed700141897caf137b92c5d2 611 Gene3D G3DSA:3.20.20.80 184 470 5.8E-93 T 14-10-2018 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 ProSitePatterns PS01027 Glycosyl hydrolases family 39 active site. 288 297 - T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 PRINTS PR00745 Glycosyl hydrolase family 39 signature 268 285 1.5E-15 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 PRINTS PR00745 Glycosyl hydrolase family 39 signature 220 236 1.5E-15 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 PRINTS PR00745 Glycosyl hydrolase family 39 signature 346 360 1.5E-15 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 PRINTS PR00745 Glycosyl hydrolase family 39 signature 285 301 1.5E-15 T 14-10-2018 IPR000514 Glycoside hydrolase, family 39 GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2024101|Reactome: R-HSA-2206302 Afer_0170 118a8b17ed700141897caf137b92c5d2 611 Gene3D G3DSA:2.60.40.1500 471 593 5.8E-93 T 14-10-2018 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 SMART SM00788 3 423 5.2E-255 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 425 184.455 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 Pfam PF00709 Adenylosuccinate synthetase 4 422 1.5E-172 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 424 3.2E-160 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 Gene3D G3DSA:3.40.440.10 5 259 4.9E-94 T 14-10-2018 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 Gene3D G3DSA:1.10.300.10 100 200 4.9E-94 T 14-10-2018 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 Afer_1958 d9f90f488faef9e074b6c327db24201c 425 SUPERFAMILY SSF52540 3 423 9.03E-161 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1958 d9f90f488faef9e074b6c327db24201c 425 Gene3D G3DSA:3.90.170.10 266 425 9.4E-63 T 14-10-2018 Afer_0408 7200519021b21e7e58de3a469dd100fd 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-52 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0408 7200519021b21e7e58de3a469dd100fd 122 Pfam PF00238 Ribosomal protein L14p/L23e 2 122 3.3E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Afer_0408 7200519021b21e7e58de3a469dd100fd 122 SUPERFAMILY SSF50193 2 122 9.42E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0408 7200519021b21e7e58de3a469dd100fd 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.53 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Afer_0408 7200519021b21e7e58de3a469dd100fd 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 8.4E-57 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 Afer_0408 7200519021b21e7e58de3a469dd100fd 122 SMART SM01374 1 122 4.0E-87 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 Afer_0260 b970c031f9e5aa86544273c11e0a72bb 207 PIRSF PIRSF000709 3 193 3.5E-7 T 14-10-2018 Afer_0260 b970c031f9e5aa86544273c11e0a72bb 207 SMART SM00855 7 160 9.5E-14 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Afer_0260 b970c031f9e5aa86544273c11e0a72bb 207 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 198 1.4E-42 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 Afer_0260 b970c031f9e5aa86544273c11e0a72bb 207 Gene3D G3DSA:3.40.50.1240 6 204 2.4E-41 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Afer_0260 b970c031f9e5aa86544273c11e0a72bb 207 SUPERFAMILY SSF53254 6 198 3.01E-39 T 14-10-2018 IPR029033 Histidine phosphatase superfamily Afer_0290 e19962721ca35740d3bfd9b99d7fdf3b 159 SUPERFAMILY SSF52402 5 143 1.17E-31 T 14-10-2018 Afer_0290 e19962721ca35740d3bfd9b99d7fdf3b 159 Gene3D G3DSA:3.40.50.620 2 154 7.1E-41 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0290 e19962721ca35740d3bfd9b99d7fdf3b 159 Pfam PF00582 Universal stress protein family 2 143 2.3E-27 T 14-10-2018 IPR006016 UspA Afer_0290 e19962721ca35740d3bfd9b99d7fdf3b 159 PRINTS PR01438 Universal stress protein signature 121 143 7.4E-12 T 14-10-2018 IPR006015 Universal stress protein A Afer_0290 e19962721ca35740d3bfd9b99d7fdf3b 159 PRINTS PR01438 Universal stress protein signature 103 115 7.4E-12 T 14-10-2018 IPR006015 Universal stress protein A Afer_0290 e19962721ca35740d3bfd9b99d7fdf3b 159 PRINTS PR01438 Universal stress protein signature 2 20 7.4E-12 T 14-10-2018 IPR006015 Universal stress protein A Afer_0600 b503c62a7d0d68054847e020fe976d3f 232 Pfam PF09851 Short C-terminal domain 189 216 4.0E-6 T 14-10-2018 IPR018649 SHOCT domain Afer_0600 b503c62a7d0d68054847e020fe976d3f 232 Pfam PF03703 Bacterial PH domain 96 151 1.9E-13 T 14-10-2018 IPR005182 Domain of unknown function DUF304 Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 Gene3D G3DSA:3.30.70.270 348 522 1.4E-42 T 14-10-2018 Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 SUPERFAMILY SSF55073 367 517 7.77E-34 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 SUPERFAMILY SSF141868 756 996 1.44E-44 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 Pfam PF00990 Diguanylate cyclase, GGDEF domain 362 518 3.0E-33 T 14-10-2018 IPR000160 GGDEF domain Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 SMART SM00267 351 525 1.3E-38 T 14-10-2018 IPR000160 GGDEF domain Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 Pfam PF00563 EAL domain 755 986 8.5E-41 T 14-10-2018 IPR001633 EAL domain Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 361 518 2.7E-31 T 14-10-2018 IPR000160 GGDEF domain Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 SMART SM00052 748 991 3.5E-21 T 14-10-2018 IPR001633 EAL domain Afer_1101 16e1b45830c58c85d055033e2560c4a3 1092 Gene3D G3DSA:3.20.20.450 754 998 1.2E-48 T 14-10-2018 IPR035919 EAL domain superfamily Afer_1627 2f449260312042f66e4ab56feb276a20 295 PIRSF PIRSF005355 1 295 4.0E-73 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 Afer_1627 2f449260312042f66e4ab56feb276a20 295 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 12 290 1.8E-69 T 14-10-2018 Afer_1627 2f449260312042f66e4ab56feb276a20 295 Pfam PF01040 UbiA prenyltransferase family 20 252 2.3E-30 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Afer_1627 2f449260312042f66e4ab56feb276a20 295 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 3 291 20.734 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 10 455 2.1E-161 T 14-10-2018 IPR014065 tRNA adenylyltransferase Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 Pfam PF01966 HD domain 270 353 7.4E-12 T 14-10-2018 IPR006674 HD domain Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 TIGRFAM TIGR00277 HDIG: HDIG domain 246 320 2.8E-12 T 14-10-2018 IPR006675 HDIG domain Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 188 242 5.7E-11 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 Gene3D G3DSA:3.30.460.10 5 151 1.4E-36 T 14-10-2018 Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 Pfam PF01743 Poly A polymerase head domain 27 154 3.8E-30 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 SUPERFAMILY SSF81301 9 150 7.19E-35 T 14-10-2018 Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 SUPERFAMILY SSF81891 152 456 7.72E-56 T 14-10-2018 Afer_0023 3797eb3c4511a10fde8a6fe8b9ea0c58 462 Gene3D G3DSA:1.10.3090.10 152 442 1.7E-39 T 14-10-2018 Afer_1854 faeaf917eba4be40df3007d84a745ec9 163 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 4 158 33.463 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_1854 faeaf917eba4be40df3007d84a745ec9 163 SUPERFAMILY SSF55040 13 155 2.75E-57 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_1854 faeaf917eba4be40df3007d84a745ec9 163 Gene3D G3DSA:3.30.70.640 4 160 1.4E-62 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_1854 faeaf917eba4be40df3007d84a745ec9 163 Pfam PF01967 MoaC family 17 150 9.1E-52 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_1854 faeaf917eba4be40df3007d84a745ec9 163 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 6 152 2.0E-59 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_0641 1494601c658775897c38528b50c91772 314 Pfam PF06574 FAD synthetase 16 167 2.2E-40 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Afer_0641 1494601c658775897c38528b50c91772 314 Pfam PF01687 Riboflavin kinase 184 305 1.3E-31 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Afer_0641 1494601c658775897c38528b50c91772 314 PIRSF PIRSF004491 1 311 8.6E-90 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Afer_0641 1494601c658775897c38528b50c91772 314 SUPERFAMILY SSF82114 174 308 2.4E-39 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Afer_0641 1494601c658775897c38528b50c91772 314 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 19 303 1.2E-67 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 Afer_0641 1494601c658775897c38528b50c91772 314 Gene3D G3DSA:2.40.30.30 186 311 2.5E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 Afer_0641 1494601c658775897c38528b50c91772 314 Gene3D G3DSA:3.40.50.620 3 185 1.3E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0641 1494601c658775897c38528b50c91772 314 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 18 55 5.1E-7 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Afer_0641 1494601c658775897c38528b50c91772 314 SUPERFAMILY SSF52374 17 179 2.95E-28 T 14-10-2018 Afer_0641 1494601c658775897c38528b50c91772 314 SMART SM00904 183 309 5.6E-49 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 SUPERFAMILY SSF48557 6 457 3.14E-138 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 ProSitePatterns PS00163 Fumarate lyases signature. 312 321 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 Pfam PF10415 Fumarase C C-terminus 404 457 1.7E-20 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 Gene3D G3DSA:1.10.275.10 6 133 3.0E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 Pfam PF00206 Lyase 13 337 3.5E-92 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 Gene3D G3DSA:1.20.200.10 134 402 1.2E-102 T 14-10-2018 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 Gene3D G3DSA:1.10.40.30 403 459 2.4E-20 T 14-10-2018 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 Hamap MF_00743 Fumarate hydratase class II [fumC]. 5 458 73.71 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 PRINTS PR00149 Fumarate lyase superfamily signature 129 147 4.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 PRINTS PR00149 Fumarate lyase superfamily signature 266 293 4.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 PRINTS PR00149 Fumarate lyase superfamily signature 312 328 4.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 PRINTS PR00149 Fumarate lyase superfamily signature 175 193 4.2E-31 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 PRINTS PR00145 Argininosuccinate lyase family signature 312 328 1.9E-6 T 14-10-2018 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 PRINTS PR00145 Argininosuccinate lyase family signature 128 150 1.9E-6 T 14-10-2018 Afer_1786 394c1ad4d1bea0eb191859d270454ebc 463 PRINTS PR00145 Argininosuccinate lyase family signature 170 190 1.9E-6 T 14-10-2018 Afer_0031 860b520eca9ca0845a205b818ce80056 110 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Afer_0031 860b520eca9ca0845a205b818ce80056 110 Gene3D G3DSA:3.40.30.10 2 109 3.4E-36 T 14-10-2018 Afer_0031 860b520eca9ca0845a205b818ce80056 110 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 105 2.9E-40 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Afer_0031 860b520eca9ca0845a205b818ce80056 110 SUPERFAMILY SSF52833 6 109 2.38E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_0031 860b520eca9ca0845a205b818ce80056 110 PRINTS PR00421 Thioredoxin family signature 32 41 1.1E-8 T 14-10-2018 Afer_0031 860b520eca9ca0845a205b818ce80056 110 PRINTS PR00421 Thioredoxin family signature 72 83 1.1E-8 T 14-10-2018 Afer_0031 860b520eca9ca0845a205b818ce80056 110 PRINTS PR00421 Thioredoxin family signature 24 32 1.1E-8 T 14-10-2018 Afer_0031 860b520eca9ca0845a205b818ce80056 110 Pfam PF00085 Thioredoxin 7 104 2.4E-32 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Afer_0031 860b520eca9ca0845a205b818ce80056 110 PIRSF PIRSF000077 3 108 5.1E-41 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 Gene3D G3DSA:3.40.50.1370 129 282 5.4E-73 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 45 52 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 22 140 1.5E-30 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 73 82 2.8E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 219 228 2.8E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 128 145 2.8E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 284 298 2.8E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 260 265 2.8E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00101 Aspartate carbamoyltransferase signature 35 57 2.8E-21 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 301 9.8E-17 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 Gene3D G3DSA:3.40.50.1370 18 299 5.4E-73 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 SUPERFAMILY SSF53671 5 304 2.49E-67 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 291 3.3E-13 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 129 140 3.3E-13 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 3.3E-13 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_1702 9c8ce6c53393ce8a76fbc6604e4d97c9 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 265 3.3E-13 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 Afer_1927 64480a34c997b62ca4b67ff805e64279 277 SUPERFAMILY SSF103481 189 276 2.35E-8 T 14-10-2018 Afer_1927 64480a34c997b62ca4b67ff805e64279 277 SUPERFAMILY SSF103481 47 134 1.24E-8 T 14-10-2018 Afer_1927 64480a34c997b62ca4b67ff805e64279 277 Pfam PF00892 EamA-like transporter family 139 273 7.2E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_0982 76906024f4a77d569f3a00bf6d4ed552 92 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 1 86 7.0E-32 T 14-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype Afer_0982 76906024f4a77d569f3a00bf6d4ed552 92 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 1 86 3.2E-18 T 14-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype Afer_0982 76906024f4a77d569f3a00bf6d4ed552 92 Gene3D G3DSA:3.30.70.240 1 75 8.1E-29 T 14-10-2018 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 Pfam PF00308 Bacterial dnaA protein 119 334 3.3E-97 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 SUPERFAMILY SSF48295 357 454 2.35E-32 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 365 432 2.1E-27 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 SMART SM00760 363 432 1.0E-35 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 454 31.64 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 Gene3D G3DSA:1.10.8.60 284 353 1.1E-24 T 14-10-2018 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 SUPERFAMILY SSF52540 119 330 4.48E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 249 276 2.1E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 151 171 2.1E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 215 229 2.1E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 413 432 2.1E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 183 197 2.1E-47 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 452 7.2E-157 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 Pfam PF11638 DnaA N-terminal domain 6 66 6.6E-9 T 14-10-2018 IPR024633 DnaA N-terminal domain Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 SMART SM00382 150 278 2.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 ProSitePatterns PS01008 DnaA protein signature. 413 432 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 Gene3D G3DSA:1.10.1750.10 354 454 3.9E-32 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 Gene3D G3DSA:3.40.50.300 107 282 1.2E-48 T 14-10-2018 Afer_0001 a15acdcb909ecb226810a8488575dd1b 458 Gene3D G3DSA:3.30.300.180 1 81 9.7E-11 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily Afer_1495 78cc456fb88421fe54804277e5d5cee4 361 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 37 356 3.9E-73 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Afer_1495 78cc456fb88421fe54804277e5d5cee4 361 Gene3D G3DSA:3.40.640.10 16 237 2.3E-58 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1495 78cc456fb88421fe54804277e5d5cee4 361 PIRSF PIRSF001434 13 360 5.1E-90 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 Afer_1495 78cc456fb88421fe54804277e5d5cee4 361 Gene3D G3DSA:3.90.1150.10 238 360 1.5E-23 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1495 78cc456fb88421fe54804277e5d5cee4 361 SUPERFAMILY SSF53383 40 357 1.97E-66 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0194 4f3ba54c02f111c8cd179822da0c7c68 96 SUPERFAMILY SSF54736 17 93 3.87E-21 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Afer_0194 4f3ba54c02f111c8cd179822da0c7c68 96 Gene3D G3DSA:3.30.1390.10 6 93 1.0E-16 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Afer_0194 4f3ba54c02f111c8cd179822da0c7c68 96 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 21 91 1.2E-20 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 Afer_0140 7a7891c969e8a702af1b4f4148dd9b80 436 Gene3D G3DSA:3.40.50.12240 13 433 4.6E-137 T 14-10-2018 Afer_0140 7a7891c969e8a702af1b4f4148dd9b80 436 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 15 428 9.3E-160 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_0140 7a7891c969e8a702af1b4f4148dd9b80 436 SUPERFAMILY SSF52540 90 357 5.84E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0140 7a7891c969e8a702af1b4f4148dd9b80 436 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 343 352 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_0140 7a7891c969e8a702af1b4f4148dd9b80 436 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 22 83 1.6E-4 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_0140 7a7891c969e8a702af1b4f4148dd9b80 436 SMART SM00382 155 336 5.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0140 7a7891c969e8a702af1b4f4148dd9b80 436 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 143 352 8.2E-69 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 PIRSF PIRSF000445 12 410 5.0E-84 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 SUPERFAMILY SSF69742 33 159 1.23E-28 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 28 158 1.1E-28 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 SUPERFAMILY SSF51735 178 305 3.03E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 101 124 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 28 410 2.1E-71 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 313 410 9.8E-19 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 Gene3D G3DSA:3.40.50.720 163 305 5.0E-19 T 14-10-2018 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 Gene3D G3DSA:3.30.460.30 3 160 7.6E-35 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 SUPERFAMILY SSF69075 310 410 9.68E-17 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 408 20.42 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 Afer_0249 ba95747a46b5a9d1d46c14a4ae1c95c2 410 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 181 297 1.1E-13 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase Afer_0911 c0724c9f2c4e99ab17aa9a8e05fa209e 232 Hamap MF_00289_B Proteasome subunit alpha [prcA]. 1 228 44.237 T 14-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 Afer_0911 c0724c9f2c4e99ab17aa9a8e05fa209e 232 Gene3D G3DSA:3.60.20.10 1 232 4.1E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0911 c0724c9f2c4e99ab17aa9a8e05fa209e 232 SUPERFAMILY SSF56235 10 224 1.85E-34 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0911 c0724c9f2c4e99ab17aa9a8e05fa209e 232 Pfam PF00227 Proteasome subunit 25 187 3.0E-20 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Afer_0911 c0724c9f2c4e99ab17aa9a8e05fa209e 232 TIGRFAM TIGR03691 20S_bact_alpha: proteasome, alpha subunit 1 222 6.1E-84 T 14-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 3.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 3.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 3.3E-25 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 PIRSF PIRSF002144 1 93 5.4E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 2 92 1.4E-45 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.761 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 Gene3D G3DSA:3.30.860.10 1 93 2.3E-39 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 SUPERFAMILY SSF54570 3 84 3.4E-35 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0402 c99a3806a560a02527a7c168349c6b4a 93 Pfam PF00203 Ribosomal protein S19 3 83 9.4E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 Gene3D G3DSA:1.20.1640.10 134 332 3.5E-7 T 14-10-2018 Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 Pfam PF07549 SecD/SecF GG Motif 49 64 6.1E-5 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 Pfam PF02355 Protein export membrane protein 135 320 2.1E-57 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 26 322 26.198 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 54 311 5.0E-67 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 113 308 4.6E-47 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 PRINTS PR01755 Bacterial translocase SecF protein signature 218 236 2.9E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 PRINTS PR01755 Bacterial translocase SecF protein signature 254 269 2.9E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 PRINTS PR01755 Bacterial translocase SecF protein signature 170 184 2.9E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 PRINTS PR01755 Bacterial translocase SecF protein signature 53 68 2.9E-26 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial Afer_0946 9dd54aca3d60ad3447e72b5cd592a16e 349 SUPERFAMILY SSF82866 125 323 1.03E-29 T 14-10-2018 Afer_1596 b2c29ef4a2f6d20cc06104c87e92ef0a 172 Gene3D G3DSA:2.40.240.10 1 95 3.0E-23 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Afer_1596 b2c29ef4a2f6d20cc06104c87e92ef0a 172 Gene3D G3DSA:2.170.120.20 97 172 6.0E-5 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal Afer_1596 b2c29ef4a2f6d20cc06104c87e92ef0a 172 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 110 171 1.9E-6 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain Afer_1596 b2c29ef4a2f6d20cc06104c87e92ef0a 172 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 24 95 1.0E-8 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Afer_1596 b2c29ef4a2f6d20cc06104c87e92ef0a 172 SUPERFAMILY SSF50715 2 170 1.13E-32 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 Afer_1596 b2c29ef4a2f6d20cc06104c87e92ef0a 172 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 6 169 2.6E-26 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 Afer_1596 b2c29ef4a2f6d20cc06104c87e92ef0a 172 Pfam PF01386 Ribosomal L25p family 6 92 3.5E-19 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 Afer_0068 a04b37ce668ecad5799e8ee30aa1fe14 289 Gene3D G3DSA:3.30.420.10 121 270 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0068 a04b37ce668ecad5799e8ee30aa1fe14 289 SUPERFAMILY SSF53098 117 279 6.07E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0068 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF00665 Integrase core domain 126 237 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0068 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF13276 HTH-like domain 43 96 8.2E-12 T 14-10-2018 IPR025948 HTH-like domain Afer_0662 a04b37ce668ecad5799e8ee30aa1fe14 289 Gene3D G3DSA:3.30.420.10 121 270 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0662 a04b37ce668ecad5799e8ee30aa1fe14 289 SUPERFAMILY SSF53098 117 279 6.07E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0662 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF00665 Integrase core domain 126 237 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0662 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF13276 HTH-like domain 43 96 8.2E-12 T 14-10-2018 IPR025948 HTH-like domain Afer_0673 a04b37ce668ecad5799e8ee30aa1fe14 289 Gene3D G3DSA:3.30.420.10 121 270 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0673 a04b37ce668ecad5799e8ee30aa1fe14 289 SUPERFAMILY SSF53098 117 279 6.07E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0673 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF00665 Integrase core domain 126 237 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0673 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF13276 HTH-like domain 43 96 8.2E-12 T 14-10-2018 IPR025948 HTH-like domain Afer_0510 a04b37ce668ecad5799e8ee30aa1fe14 289 Gene3D G3DSA:3.30.420.10 121 270 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0510 a04b37ce668ecad5799e8ee30aa1fe14 289 SUPERFAMILY SSF53098 117 279 6.07E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0510 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF00665 Integrase core domain 126 237 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0510 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF13276 HTH-like domain 43 96 8.2E-12 T 14-10-2018 IPR025948 HTH-like domain Afer_0277 a04b37ce668ecad5799e8ee30aa1fe14 289 Gene3D G3DSA:3.30.420.10 121 270 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0277 a04b37ce668ecad5799e8ee30aa1fe14 289 SUPERFAMILY SSF53098 117 279 6.07E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0277 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF00665 Integrase core domain 126 237 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0277 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF13276 HTH-like domain 43 96 8.2E-12 T 14-10-2018 IPR025948 HTH-like domain Afer_0447 a04b37ce668ecad5799e8ee30aa1fe14 289 Gene3D G3DSA:3.30.420.10 121 270 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0447 a04b37ce668ecad5799e8ee30aa1fe14 289 SUPERFAMILY SSF53098 117 279 6.07E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0447 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF00665 Integrase core domain 126 237 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0447 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF13276 HTH-like domain 43 96 8.2E-12 T 14-10-2018 IPR025948 HTH-like domain Afer_0691 a04b37ce668ecad5799e8ee30aa1fe14 289 Gene3D G3DSA:3.30.420.10 121 270 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0691 a04b37ce668ecad5799e8ee30aa1fe14 289 SUPERFAMILY SSF53098 117 279 6.07E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0691 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF00665 Integrase core domain 126 237 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0691 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF13276 HTH-like domain 43 96 8.2E-12 T 14-10-2018 IPR025948 HTH-like domain Afer_1486 a04b37ce668ecad5799e8ee30aa1fe14 289 Gene3D G3DSA:3.30.420.10 121 270 6.3E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1486 a04b37ce668ecad5799e8ee30aa1fe14 289 SUPERFAMILY SSF53098 117 279 6.07E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1486 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF00665 Integrase core domain 126 237 1.4E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_1486 a04b37ce668ecad5799e8ee30aa1fe14 289 Pfam PF13276 HTH-like domain 43 96 8.2E-12 T 14-10-2018 IPR025948 HTH-like domain Afer_1570 58c3ab32fb3a060bdf2a4424d8858899 157 Pfam PF01799 [2Fe-2S] binding domain 73 146 9.4E-30 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 Afer_1570 58c3ab32fb3a060bdf2a4424d8858899 157 SUPERFAMILY SSF54292 3 78 1.13E-24 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Afer_1570 58c3ab32fb3a060bdf2a4424d8858899 157 Gene3D G3DSA:3.10.20.30 1 74 1.2E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Afer_1570 58c3ab32fb3a060bdf2a4424d8858899 157 SUPERFAMILY SSF47741 85 154 1.02E-31 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily Afer_1570 58c3ab32fb3a060bdf2a4424d8858899 157 Gene3D G3DSA:1.10.150.120 75 157 1.2E-31 T 14-10-2018 Afer_1570 58c3ab32fb3a060bdf2a4424d8858899 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 63 7.1E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 Gene3D G3DSA:2.40.30.10 99 196 2.3E-20 T 14-10-2018 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 Gene3D G3DSA:3.40.50.80 203 334 3.1E-21 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 Gene3D G3DSA:3.10.20.30 1 95 4.0E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 SUPERFAMILY SSF52343 187 327 4.45E-27 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 Pfam PF00175 Oxidoreductase NAD-binding domain 211 311 6.0E-9 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 234 243 8.8E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 133 145 8.8E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 8.8E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 193 202 8.8E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 PRINTS PR00410 Phenol hydroxylase reductase family signature 150 157 8.8E-13 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 SUPERFAMILY SSF54292 3 85 4.33E-23 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 Pfam PF00970 Oxidoreductase FAD-binding domain 117 198 4.1E-8 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 8 80 3.3E-12 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 Afer_1377 c3bbfd277566687c62dab896b782fe0c 344 SUPERFAMILY SSF63380 96 199 6.04E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Afer_0960 b215375b887cfab27a3173cf66c1f235 336 Gene3D G3DSA:3.40.50.10800 194 287 1.7E-96 T 14-10-2018 Afer_0960 b215375b887cfab27a3173cf66c1f235 336 Gene3D G3DSA:3.40.50.10800 109 329 1.7E-96 T 14-10-2018 Afer_0960 b215375b887cfab27a3173cf66c1f235 336 SUPERFAMILY SSF142754 36 330 1.22E-89 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Afer_0960 b215375b887cfab27a3173cf66c1f235 336 Gene3D G3DSA:3.40.50.10800 38 312 1.7E-96 T 14-10-2018 Afer_0960 b215375b887cfab27a3173cf66c1f235 336 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 38 330 1.7E-80 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Afer_0960 b215375b887cfab27a3173cf66c1f235 336 Pfam PF02445 Quinolinate synthetase A protein 32 329 1.1E-96 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 Afer_1060 5fc5a6ae0e26b6a44aaedc1e1aa82a0a 230 SUPERFAMILY SSF52540 27 213 4.75E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1060 5fc5a6ae0e26b6a44aaedc1e1aa82a0a 230 SMART SM00382 31 211 1.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1060 5fc5a6ae0e26b6a44aaedc1e1aa82a0a 230 Gene3D G3DSA:3.40.50.300 10 228 8.9E-56 T 14-10-2018 Afer_1060 5fc5a6ae0e26b6a44aaedc1e1aa82a0a 230 Pfam PF00005 ABC transporter 27 164 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1060 5fc5a6ae0e26b6a44aaedc1e1aa82a0a 230 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 Gene3D G3DSA:2.30.30.30 115 195 3.1E-30 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 SUPERFAMILY SSF50104 126 268 3.19E-54 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 272 5.3E-124 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 250 2.8E-53 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 SMART SM01382 124 252 1.5E-87 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 46.144 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 PIRSF PIRSF002158 8 274 7.5E-92 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 SUPERFAMILY SSF50249 3 124 7.88E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 SMART SM01383 42 118 6.6E-41 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 Gene3D G3DSA:4.10.950.10 196 273 5.2E-30 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 4.2E-31 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0401 8ea5f1d3559bab30ab75285e2f401a36 278 Gene3D G3DSA:2.40.50.140 1 114 6.4E-43 T 14-10-2018 Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 8 333 6.2E-64 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 PIRSF PIRSF005485 3 336 1.8E-69 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 Gene3D G3DSA:1.10.10.10 1 88 1.3E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 SUPERFAMILY SSF46785 6 85 6.47E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 Pfam PF01628 HrcA protein C terminal domain 109 318 4.7E-31 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 5 328 21.62 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 SUPERFAMILY SSF55781 75 334 1.08E-32 T 14-10-2018 Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 Gene3D G3DSA:3.30.450.40 111 331 2.0E-19 T 14-10-2018 IPR029016 GAF-like domain superfamily Afer_1294 25a8b5b7aa55485f9e6a45ff2fb6078d 336 Gene3D G3DSA:3.30.390.60 133 230 2.0E-19 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily Afer_0728 546bfbf79b5d24f3af49c7de415541d9 388 Pfam PF00899 ThiF family 129 364 2.9E-63 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Afer_0728 546bfbf79b5d24f3af49c7de415541d9 388 Pfam PF00581 Rhodanese-like domain 24 110 2.5E-18 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_0728 546bfbf79b5d24f3af49c7de415541d9 388 SUPERFAMILY SSF69572 120 369 1.44E-91 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Afer_0728 546bfbf79b5d24f3af49c7de415541d9 388 Gene3D G3DSA:3.40.50.720 122 371 3.1E-89 T 14-10-2018 Afer_0728 546bfbf79b5d24f3af49c7de415541d9 388 Gene3D G3DSA:3.40.250.10 2 118 7.0E-31 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_0728 546bfbf79b5d24f3af49c7de415541d9 388 SUPERFAMILY SSF52821 7 118 1.44E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_0728 546bfbf79b5d24f3af49c7de415541d9 388 SMART SM00450 18 114 4.2E-22 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_0906 56187ff72a366fb42e701060ff1746c2 78 SUPERFAMILY SSF54862 1 76 3.16E-11 T 14-10-2018 Afer_0906 56187ff72a366fb42e701060ff1746c2 78 Gene3D G3DSA:3.30.70.20 1 78 3.2E-21 T 14-10-2018 Afer_0906 56187ff72a366fb42e701060ff1746c2 78 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 8.2E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Afer_0906 56187ff72a366fb42e701060ff1746c2 78 PRINTS PR00352 3Fe-4S ferredoxin signature 61 73 8.2E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Afer_0906 56187ff72a366fb42e701060ff1746c2 78 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 8.2E-7 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Afer_0906 56187ff72a366fb42e701060ff1746c2 78 Pfam PF13459 4Fe-4S single cluster domain 3 75 2.7E-17 T 14-10-2018 Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 Gene3D G3DSA:2.40.50.140 1 65 2.0E-18 T 14-10-2018 Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 SUPERFAMILY SSF50249 1 62 4.11E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 SUPERFAMILY SSF47781 65 133 9.53E-17 T 14-10-2018 IPR010994 RuvA domain 2-like Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 Gene3D G3DSA:1.10.150.20 66 136 8.1E-20 T 14-10-2018 Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 187 7.6E-40 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 188 25.035 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 SMART SM00278 72 91 88.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 SMART SM00278 107 126 0.39 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 Pfam PF01330 RuvA N terminal domain 1 61 7.1E-16 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 Afer_1216 0c95b1a347ad741b892a7f9ce61a9bae 189 Pfam PF14520 Helix-hairpin-helix domain 71 127 1.8E-13 T 14-10-2018 Afer_0074 a85c78163f6ad9bb7a90164fe5a4ebcd 283 Pfam PF01734 Patatin-like phospholipase 12 179 9.6E-23 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 Afer_0074 a85c78163f6ad9bb7a90164fe5a4ebcd 283 SUPERFAMILY SSF52151 9 223 4.32E-40 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Afer_0074 a85c78163f6ad9bb7a90164fe5a4ebcd 283 Gene3D G3DSA:3.40.1090.10 137 226 2.7E-6 T 14-10-2018 Afer_0074 a85c78163f6ad9bb7a90164fe5a4ebcd 283 Gene3D G3DSA:3.40.1090.10 1 95 1.1E-18 T 14-10-2018 Afer_1258 17ee2cb470160b186bdf702252d57c88 684 SUPERFAMILY SSF63825 187 362 5.23E-5 T 14-10-2018 Afer_1355 da757dc472855f50cdf0c5f634fbf9f2 120 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 3 118 1.0E-38 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Afer_1355 da757dc472855f50cdf0c5f634fbf9f2 120 PIRSF PIRSF005965 1 120 1.7E-40 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Afer_1355 da757dc472855f50cdf0c5f634fbf9f2 120 Gene3D G3DSA:3.30.1330.40 2 120 5.6E-42 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Afer_1355 da757dc472855f50cdf0c5f634fbf9f2 120 Pfam PF07736 Chorismate mutase type I 4 118 5.0E-40 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Afer_1355 da757dc472855f50cdf0c5f634fbf9f2 120 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 9 118 1.0E-28 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 Afer_1355 da757dc472855f50cdf0c5f634fbf9f2 120 SUPERFAMILY SSF55298 1 118 5.65E-40 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 Afer_1725 d9e1cc0cb45154e565dcb53aa65b2f6b 438 Gene3D G3DSA:3.80.30.20 160 338 1.1E-7 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Afer_1725 d9e1cc0cb45154e565dcb53aa65b2f6b 438 Pfam PF04055 Radical SAM superfamily 166 327 8.9E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_1725 d9e1cc0cb45154e565dcb53aa65b2f6b 438 SUPERFAMILY SSF102114 163 331 3.79E-19 T 14-10-2018 Afer_1725 d9e1cc0cb45154e565dcb53aa65b2f6b 438 SMART SM00729 160 388 6.3E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_0861 656982522c629c040451b11bc568a3a1 357 Pfam PF00535 Glycosyl transferase family 2 38 162 9.8E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_0861 656982522c629c040451b11bc568a3a1 357 Gene3D G3DSA:3.90.550.10 27 244 2.0E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0861 656982522c629c040451b11bc568a3a1 357 SUPERFAMILY SSF53448 34 233 2.34E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1842 e84bc3ec5bf7c5c0251bfaacbc39e172 508 Pfam PF05598 Transposase domain (DUF772) 53 122 3.2E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Afer_1842 e84bc3ec5bf7c5c0251bfaacbc39e172 508 Pfam PF01609 Transposase DDE domain 260 357 6.1E-10 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Afer_1842 e84bc3ec5bf7c5c0251bfaacbc39e172 508 Pfam PF13751 Transposase DDE domain 381 492 1.5E-23 T 14-10-2018 IPR025668 Transposase DDE domain Afer_0566 2c4d63ba4656eaa68e40b6d2f2533f0e 253 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 245 6.7E-92 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 Afer_0566 2c4d63ba4656eaa68e40b6d2f2533f0e 253 Gene3D G3DSA:3.40.50.300 4 250 6.4E-53 T 14-10-2018 Afer_0566 2c4d63ba4656eaa68e40b6d2f2533f0e 253 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0566 2c4d63ba4656eaa68e40b6d2f2533f0e 253 SUPERFAMILY SSF52540 4 233 3.93E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0566 2c4d63ba4656eaa68e40b6d2f2533f0e 253 Pfam PF00005 ABC transporter 21 172 6.2E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0432 0512295565168be8a0958910033e7c0b 613 Pfam PF01380 SIS domain 294 420 4.2E-31 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Afer_0432 0512295565168be8a0958910033e7c0b 613 Pfam PF01380 SIS domain 465 590 1.8E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Afer_0432 0512295565168be8a0958910033e7c0b 613 Gene3D G3DSA:3.40.50.10490 451 598 1.4E-115 T 14-10-2018 Afer_0432 0512295565168be8a0958910033e7c0b 613 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 613 1.6E-195 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 Afer_0432 0512295565168be8a0958910033e7c0b 613 SUPERFAMILY SSF53697 249 613 4.36E-94 T 14-10-2018 Afer_0432 0512295565168be8a0958910033e7c0b 613 Gene3D G3DSA:3.40.50.10490 251 612 1.4E-115 T 14-10-2018 Afer_0432 0512295565168be8a0958910033e7c0b 613 Gene3D G3DSA:3.60.20.10 2 235 1.5E-57 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0432 0512295565168be8a0958910033e7c0b 613 Pfam PF13522 Glutamine amidotransferase domain 69 180 1.1E-18 T 14-10-2018 Afer_0432 0512295565168be8a0958910033e7c0b 613 SUPERFAMILY SSF56235 2 222 1.97E-52 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0379 7adc3f5b58a791d905a6fead99b47255 164 Gene3D G3DSA:3.30.70.860 3 163 1.6E-58 T 14-10-2018 IPR035571 UPF0234-like, C-terminal Afer_0379 7adc3f5b58a791d905a6fead99b47255 164 SUPERFAMILY SSF89963 2 86 4.18E-27 T 14-10-2018 IPR036183 YajQ-like superfamily Afer_0379 7adc3f5b58a791d905a6fead99b47255 164 Gene3D G3DSA:3.30.70.990 9 100 1.6E-58 T 14-10-2018 IPR035570 UPF0234, N-terminal Afer_0379 7adc3f5b58a791d905a6fead99b47255 164 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 164 25.239 T 14-10-2018 IPR007551 Protein of unknown function DUF520 Afer_0379 7adc3f5b58a791d905a6fead99b47255 164 SUPERFAMILY SSF89963 91 164 9.15E-23 T 14-10-2018 IPR036183 YajQ-like superfamily Afer_0379 7adc3f5b58a791d905a6fead99b47255 164 Pfam PF04461 Protein of unknown function (DUF520) 2 163 8.5E-60 T 14-10-2018 IPR007551 Protein of unknown function DUF520 Afer_0120 14de8cce32129e7bffc115a3fb40655b 112 SMART SM00961 12 109 5.2E-47 T 14-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0120 14de8cce32129e7bffc115a3fb40655b 112 Gene3D G3DSA:3.30.190.10 1 110 1.1E-45 T 14-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0120 14de8cce32129e7bffc115a3fb40655b 112 SUPERFAMILY SSF55239 4 111 6.67E-42 T 14-10-2018 IPR036385 Ribulose bisphosphate carboxylase, small subunit superfamily KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0120 14de8cce32129e7bffc115a3fb40655b 112 Pfam PF00101 Ribulose bisphosphate carboxylase, small chain 13 108 2.4E-39 T 14-10-2018 IPR000894 Ribulose bisphosphate carboxylase small chain, domain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0120 14de8cce32129e7bffc115a3fb40655b 112 PRINTS PR00152 RuBisCO small subunit signature 11 37 1.2E-5 T 14-10-2018 IPR024681 Ribulose bisphosphate carboxylase, small chain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_0120 14de8cce32129e7bffc115a3fb40655b 112 PRINTS PR00152 RuBisCO small subunit signature 39 54 1.2E-5 T 14-10-2018 IPR024681 Ribulose bisphosphate carboxylase, small chain KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 827 19.721 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 Pfam PF01043 SecA preprotein cross-linking domain 233 339 3.2E-37 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 813 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 ProSitePatterns PS01312 SecA family signature. 481 496 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 SUPERFAMILY SSF81767 226 349 4.45E-44 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 Pfam PF07516 SecA Wing and Scaffold domain 611 824 3.7E-59 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 SUPERFAMILY SSF81886 615 830 1.83E-61 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 SMART SM00957 4 383 1.9E-270 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 Gene3D G3DSA:3.40.50.300 398 613 2.7E-82 T 14-10-2018 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 SUPERFAMILY SSF52540 4 396 1.09E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 SMART SM00958 227 339 6.1E-63 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 SUPERFAMILY SSF52540 397 612 7.17E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 Gene3D G3DSA:3.40.50.300 21 396 9.5E-175 T 14-10-2018 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 Pfam PF07517 SecA DEAD-like domain 7 382 9.9E-127 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 Gene3D G3DSA:3.90.1440.10 228 349 9.5E-175 T 14-10-2018 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 Gene3D G3DSA:1.10.3060.10 616 827 4.9E-63 T 14-10-2018 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 PRINTS PR00906 SecA protein signature 61 85 1.7E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 PRINTS PR00906 SecA protein signature 115 125 1.7E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 PRINTS PR00906 SecA protein signature 99 113 1.7E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 PRINTS PR00906 SecA protein signature 320 342 1.7E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 PRINTS PR00906 SecA protein signature 169 189 1.7E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 PRINTS PR00906 SecA protein signature 394 407 1.7E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_1763 2780d85b1dc253145d5df75bca3d29a3 872 PRINTS PR00906 SecA protein signature 357 374 1.7E-70 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 Afer_0763 50b0296ae736b27810a010c4a114b515 419 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 8.5E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_0763 50b0296ae736b27810a010c4a114b515 419 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 388 2.2E-14 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Afer_0763 50b0296ae736b27810a010c4a114b515 419 SMART SM00382 109 262 7.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0763 50b0296ae736b27810a010c4a114b515 419 SMART SM01086 311 405 1.9E-32 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Afer_0763 50b0296ae736b27810a010c4a114b515 419 Gene3D G3DSA:1.10.8.60 310 416 1.6E-36 T 14-10-2018 Afer_0763 50b0296ae736b27810a010c4a114b515 419 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 9 405 1.2E-195 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Afer_0763 50b0296ae736b27810a010c4a114b515 419 Gene3D G3DSA:3.30.50.30 3 50 7.0E-21 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily Afer_0763 50b0296ae736b27810a010c4a114b515 419 SUPERFAMILY SSF52540 61 397 6.23E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0763 50b0296ae736b27810a010c4a114b515 419 SMART SM00994 10 49 1.3E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Afer_0763 50b0296ae736b27810a010c4a114b515 419 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.0E-18 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 Afer_0763 50b0296ae736b27810a010c4a114b515 419 SUPERFAMILY SSF57716 11 46 2.28E-10 T 14-10-2018 Afer_0763 50b0296ae736b27810a010c4a114b515 419 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 51.609 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 Afer_0763 50b0296ae736b27810a010c4a114b515 419 Gene3D G3DSA:3.40.50.300 56 308 3.4E-104 T 14-10-2018 Afer_1701 67ef6a2cd45cfeb06fb6f647e0e250b9 443 SUPERFAMILY SSF51556 52 375 2.86E-70 T 14-10-2018 IPR032466 Metal-dependent hydrolase Afer_1701 67ef6a2cd45cfeb06fb6f647e0e250b9 443 ProSitePatterns PS00483 Dihydroorotase signature 2. 297 308 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1701 67ef6a2cd45cfeb06fb6f647e0e250b9 443 SUPERFAMILY SSF51338 3 442 7.2E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_1701 67ef6a2cd45cfeb06fb6f647e0e250b9 443 Gene3D G3DSA:3.20.20.140 52 382 8.9E-90 T 14-10-2018 Afer_1701 67ef6a2cd45cfeb06fb6f647e0e250b9 443 ProSitePatterns PS00482 Dihydroorotase signature 1. 54 62 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 Afer_1701 67ef6a2cd45cfeb06fb6f647e0e250b9 443 Gene3D G3DSA:2.30.40.10 15 434 8.9E-90 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_1701 67ef6a2cd45cfeb06fb6f647e0e250b9 443 Pfam PF01979 Amidohydrolase family 47 434 1.4E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 Pfam PF00586 AIR synthase related protein, N-terminal domain 39 134 1.5E-18 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 SUPERFAMILY SSF55326 20 135 3.14E-22 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 Gene3D G3DSA:3.90.650.10 140 300 4.6E-33 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 Pfam PF02769 AIR synthase related protein, C-terminal domain 145 285 6.2E-12 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 SUPERFAMILY SSF56042 138 287 1.06E-22 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 16 300 6.8E-63 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 5 301 24.015 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 Gene3D G3DSA:3.30.1330.10 3 136 1.9E-28 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Afer_0692 245fe883e9b208e6895b31b3c2ae9eb6 309 PIRSF PIRSF005303 4 301 9.1E-66 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 Afer_1059 c8fee377d8c826a982316b8d6a54e56f 283 Gene3D G3DSA:3.40.50.300 9 247 2.5E-65 T 14-10-2018 Afer_1059 c8fee377d8c826a982316b8d6a54e56f 283 SMART SM00382 38 223 3.9E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1059 c8fee377d8c826a982316b8d6a54e56f 283 Pfam PF00005 ABC transporter 29 175 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1059 c8fee377d8c826a982316b8d6a54e56f 283 SUPERFAMILY SSF52540 10 233 8.91E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1059 c8fee377d8c826a982316b8d6a54e56f 283 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0838 144cd9e08219484c6c675f0cbc73a59f 374 Pfam PF00924 Mechanosensitive ion channel 135 329 5.3E-27 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 Afer_0838 144cd9e08219484c6c675f0cbc73a59f 374 SUPERFAMILY SSF50182 180 245 5.23E-14 T 14-10-2018 IPR010920 LSM domain superfamily Afer_0760 c38ff68c31d8a7db3a8cbd613f0b86bb 130 Pfam PF02583 Metal-sensitive transcriptional repressor 51 126 8.0E-23 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 Afer_0760 c38ff68c31d8a7db3a8cbd613f0b86bb 130 Gene3D G3DSA:1.20.58.1000 37 130 4.3E-22 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 47 61 6.6E-9 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 77 93 6.6E-9 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 Pfam PF00117 Glutamine amidotransferase class-I 8 187 2.8E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 6 188 2.3E-55 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 50 59 2.8E-13 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 2.8E-13 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 77 88 2.8E-13 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00097 Anthranilate synthase component II signature 102 110 7.0E-32 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00097 Anthranilate synthase component II signature 167 180 7.0E-32 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00097 Anthranilate synthase component II signature 50 59 7.0E-32 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00097 Anthranilate synthase component II signature 122 134 7.0E-32 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00097 Anthranilate synthase component II signature 77 88 7.0E-32 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 PRINTS PR00097 Anthranilate synthase component II signature 6 20 7.0E-32 T 14-10-2018 Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 Gene3D G3DSA:3.40.50.880 4 191 6.1E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0086 2ab2c9ead10e96658d8a88196534a324 197 SUPERFAMILY SSF52317 5 190 1.55E-50 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1905 cc8bf8125f11b37e561f084a72585f48 338 Gene3D G3DSA:1.10.600.10 12 325 3.7E-77 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Afer_1905 cc8bf8125f11b37e561f084a72585f48 338 Pfam PF00348 Polyprenyl synthetase 34 264 2.8E-57 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 Afer_1905 cc8bf8125f11b37e561f084a72585f48 338 SUPERFAMILY SSF48576 15 296 1.12E-66 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily Afer_1905 cc8bf8125f11b37e561f084a72585f48 338 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 208 220 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site Afer_1593 1c8bc62196e77b21050a6276cd685828 337 SUPERFAMILY SSF54534 171 261 1.83E-11 T 14-10-2018 Afer_1593 1c8bc62196e77b21050a6276cd685828 337 Pfam PF13145 PPIC-type PPIASE domain 157 269 3.7E-9 T 14-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 Afer_1593 1c8bc62196e77b21050a6276cd685828 337 Gene3D G3DSA:3.10.50.40 169 265 2.0E-12 T 14-10-2018 Afer_1491 bfba017cede54abb04f8a57f0d2a71f9 169 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 53 59 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Afer_1491 bfba017cede54abb04f8a57f0d2a71f9 169 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 2 159 32.743 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Afer_1491 bfba017cede54abb04f8a57f0d2a71f9 169 SUPERFAMILY SSF50324 3 158 1.83E-56 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Afer_1491 bfba017cede54abb04f8a57f0d2a71f9 169 Gene3D G3DSA:3.90.80.10 1 162 6.4E-60 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Afer_1491 bfba017cede54abb04f8a57f0d2a71f9 169 Pfam PF00719 Inorganic pyrophosphatase 6 158 1.4E-50 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 Afer_1138 778bddd0872144938a7ce4b40547d8c6 249 Pfam PF01728 FtsJ-like methyltransferase 58 187 2.0E-13 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 Afer_1138 778bddd0872144938a7ce4b40547d8c6 249 Gene3D G3DSA:3.40.50.150 56 247 2.1E-65 T 14-10-2018 Afer_1138 778bddd0872144938a7ce4b40547d8c6 249 Gene3D G3DSA:3.10.290.10 1 55 1.0E-10 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 Afer_1138 778bddd0872144938a7ce4b40547d8c6 249 SUPERFAMILY SSF53335 56 184 8.86E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1138 778bddd0872144938a7ce4b40547d8c6 249 Pfam PF01479 S4 domain 4 50 3.6E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1138 778bddd0872144938a7ce4b40547d8c6 249 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 234 1.7E-58 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 Afer_1138 778bddd0872144938a7ce4b40547d8c6 249 SMART SM00363 4 67 5.6E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1138 778bddd0872144938a7ce4b40547d8c6 249 SUPERFAMILY SSF55174 3 57 6.48E-10 T 14-10-2018 Afer_1902 665667aa0cffdf64f8896f60c7787e08 356 Gene3D G3DSA:1.20.1260.110 140 276 8.2E-37 T 14-10-2018 IPR038331 DisA, linker domain superfamily Afer_1902 665667aa0cffdf64f8896f60c7787e08 356 Gene3D G3DSA:3.40.1700.10 4 137 1.1E-51 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Afer_1902 665667aa0cffdf64f8896f60c7787e08 356 SUPERFAMILY SSF143597 15 134 2.35E-28 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily Afer_1902 665667aa0cffdf64f8896f60c7787e08 356 Pfam PF10635 DisA bacterial checkpoint controller linker region 138 269 8.6E-38 T 14-10-2018 IPR018906 DNA integrity scanning, DisA, linker region Afer_1902 665667aa0cffdf64f8896f60c7787e08 356 Gene3D G3DSA:1.10.150.20 298 356 1.5E-6 T 14-10-2018 Afer_1902 665667aa0cffdf64f8896f60c7787e08 356 SUPERFAMILY SSF47781 297 353 8.53E-6 T 14-10-2018 IPR010994 RuvA domain 2-like Afer_1902 665667aa0cffdf64f8896f60c7787e08 356 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 21 132 6.1E-25 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal Afer_1274 e96e1e1e8b2b44dcc804a9cb63ce19a7 237 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 130 185 1.1E-7 T 14-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain Afer_1274 e96e1e1e8b2b44dcc804a9cb63ce19a7 237 SMART SM00858 59 121 6.7E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Afer_1274 e96e1e1e8b2b44dcc804a9cb63ce19a7 237 Pfam PF08666 SAF domain 62 120 5.7E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Afer_0824 041ecae27677c8a63c323a800c31a302 326 SUPERFAMILY SSF52518 1 204 2.09E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0824 041ecae27677c8a63c323a800c31a302 326 Gene3D G3DSA:3.40.50.970 1 192 2.5E-84 T 14-10-2018 Afer_0824 041ecae27677c8a63c323a800c31a302 326 Gene3D G3DSA:3.40.50.920 193 324 4.2E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Afer_0824 041ecae27677c8a63c323a800c31a302 326 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 2.7E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Afer_0824 041ecae27677c8a63c323a800c31a302 326 Pfam PF02780 Transketolase, C-terminal domain 194 316 7.4E-37 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Afer_0824 041ecae27677c8a63c323a800c31a302 326 SMART SM00861 4 179 6.2E-65 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Afer_0824 041ecae27677c8a63c323a800c31a302 326 SUPERFAMILY SSF52922 189 325 3.53E-38 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Afer_1734 4c4e9f18abc368a771c33bc1aca6249e 424 Gene3D G3DSA:2.60.200.40 231 388 2.3E-23 T 14-10-2018 Afer_1734 4c4e9f18abc368a771c33bc1aca6249e 424 SMART SM00046 110 231 1.7E-7 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Afer_1734 4c4e9f18abc368a771c33bc1aca6249e 424 Pfam PF00781 Diacylglycerol kinase catalytic domain 111 226 1.1E-15 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 Afer_1734 4c4e9f18abc368a771c33bc1aca6249e 424 Gene3D G3DSA:3.40.50.10330 105 230 1.6E-21 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 Afer_1734 4c4e9f18abc368a771c33bc1aca6249e 424 SUPERFAMILY SSF111331 109 399 9.16E-51 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily Afer_0584 06a724690cb097f61b0d9aadd304e5e5 141 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 9 90 1.9E-5 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Afer_0584 06a724690cb097f61b0d9aadd304e5e5 141 SUPERFAMILY SSF50475 9 129 9.02E-17 T 14-10-2018 Afer_0584 06a724690cb097f61b0d9aadd304e5e5 141 Gene3D G3DSA:2.30.110.10 2 132 1.1E-22 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Afer_0958 24ea1d7ee8b125810bdd27fb9813eb21 283 PIRSF PIRSF006250 5 282 1.8E-75 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 Afer_0958 24ea1d7ee8b125810bdd27fb9813eb21 283 Gene3D G3DSA:3.90.1170.20 16 279 6.4E-85 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 Afer_0958 24ea1d7ee8b125810bdd27fb9813eb21 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 116 279 5.3E-45 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 Afer_0958 24ea1d7ee8b125810bdd27fb9813eb21 283 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 13 279 1.1E-78 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 Afer_0958 24ea1d7ee8b125810bdd27fb9813eb21 283 SUPERFAMILY SSF51690 116 279 7.46E-49 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Afer_0958 24ea1d7ee8b125810bdd27fb9813eb21 283 Gene3D G3DSA:3.20.20.70 119 270 6.4E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0958 24ea1d7ee8b125810bdd27fb9813eb21 283 SUPERFAMILY SSF54675 8 115 6.67E-21 T 14-10-2018 Afer_0958 24ea1d7ee8b125810bdd27fb9813eb21 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 23 114 1.2E-17 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 Afer_1339 119bda3aecbfde2ed995d021b22d93c6 429 Pfam PF05977 Transmembrane secretion effector 9 409 2.6E-22 T 14-10-2018 IPR010290 Transmembrane secretion effector Afer_1339 119bda3aecbfde2ed995d021b22d93c6 429 Gene3D G3DSA:1.20.1250.20 12 408 1.2E-25 T 14-10-2018 Afer_1339 119bda3aecbfde2ed995d021b22d93c6 429 SUPERFAMILY SSF103473 14 407 2.49E-31 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1159 40b0546bc2fef207b1b13c1532f5b102 189 Pfam PF03358 NADPH-dependent FMN reductase 1 148 2.7E-34 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 Afer_1159 40b0546bc2fef207b1b13c1532f5b102 189 SUPERFAMILY SSF52218 1 173 4.19E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Afer_1159 40b0546bc2fef207b1b13c1532f5b102 189 Gene3D G3DSA:3.40.50.360 2 186 6.7E-49 T 14-10-2018 IPR029039 Flavoprotein-like superfamily Afer_1088 73ce1dd2f6d85d23b781dd101689fb42 80 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 5 75 6.6E-22 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Afer_1088 73ce1dd2f6d85d23b781dd101689fb42 80 Hamap MF_01217 Acyl carrier protein [acpP]. 5 79 17.51 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Afer_1088 73ce1dd2f6d85d23b781dd101689fb42 80 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 36 75 1.0E-5 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Afer_1088 73ce1dd2f6d85d23b781dd101689fb42 80 SUPERFAMILY SSF47336 1 79 9.68E-19 T 14-10-2018 IPR036736 ACP-like superfamily Afer_1088 73ce1dd2f6d85d23b781dd101689fb42 80 Pfam PF00550 Phosphopantetheine attachment site 16 70 5.7E-12 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Afer_1088 73ce1dd2f6d85d23b781dd101689fb42 80 Gene3D G3DSA:1.10.1200.10 2 80 1.6E-20 T 14-10-2018 IPR036736 ACP-like superfamily Afer_0886 ff10b497f0783a05be3c1df5d07cbdd9 610 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 106 511 2.8E-37 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Afer_0886 ff10b497f0783a05be3c1df5d07cbdd9 610 SUPERFAMILY SSF53850 78 610 2.17E-47 T 14-10-2018 Afer_0886 ff10b497f0783a05be3c1df5d07cbdd9 610 Gene3D G3DSA:3.40.190.10 44 323 3.2E-29 T 14-10-2018 Afer_0886 ff10b497f0783a05be3c1df5d07cbdd9 610 Gene3D G3DSA:3.10.105.10 337 576 4.4E-17 T 14-10-2018 Afer_1438 54ee02be164bd47910ea08236284bad3 205 Gene3D G3DSA:1.10.357.10 2 197 2.6E-42 T 14-10-2018 Afer_1438 54ee02be164bd47910ea08236284bad3 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 55 3.8E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1438 54ee02be164bd47910ea08236284bad3 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Afer_1438 54ee02be164bd47910ea08236284bad3 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1438 54ee02be164bd47910ea08236284bad3 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1438 54ee02be164bd47910ea08236284bad3 205 SUPERFAMILY SSF46689 2 78 1.9E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1758 6979af2c04bff4f5d38d93a33d6ca876 252 Gene3D G3DSA:3.40.50.720 2 75 5.4E-9 T 14-10-2018 Afer_1758 6979af2c04bff4f5d38d93a33d6ca876 252 SUPERFAMILY SSF51735 6 107 7.61E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0294 c082726650bd3c1cbcd221469bad0225 170 Pfam PF01475 Ferric uptake regulator family 19 111 2.1E-20 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Afer_0294 c082726650bd3c1cbcd221469bad0225 170 Gene3D G3DSA:1.10.10.10 8 89 6.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0294 c082726650bd3c1cbcd221469bad0225 170 SUPERFAMILY SSF46785 12 140 3.34E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0294 c082726650bd3c1cbcd221469bad0225 170 Gene3D G3DSA:3.30.1490.190 91 155 2.8E-12 T 14-10-2018 Afer_0888 7e089c939a2220f27d4ac14f1a00509f 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 292 4.7E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_0888 7e089c939a2220f27d4ac14f1a00509f 293 SUPERFAMILY SSF161098 86 273 1.7E-20 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0888 7e089c939a2220f27d4ac14f1a00509f 293 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 68 6.8E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Afer_0888 7e089c939a2220f27d4ac14f1a00509f 293 Gene3D G3DSA:1.10.3720.10 87 291 9.9E-18 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0225 5188a6b92614355a60872d245a49af6c 170 SUPERFAMILY SSF52540 6 164 1.08E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0225 5188a6b92614355a60872d245a49af6c 170 Pfam PF01202 Shikimate kinase 14 162 8.7E-38 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Afer_0225 5188a6b92614355a60872d245a49af6c 170 Gene3D G3DSA:3.40.50.300 5 166 2.9E-48 T 14-10-2018 Afer_0225 5188a6b92614355a60872d245a49af6c 170 Hamap MF_00109 Shikimate kinase [aroK]. 5 165 24.649 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Afer_0225 5188a6b92614355a60872d245a49af6c 170 ProSitePatterns PS01128 Shikimate kinase signature. 61 86 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 Afer_0225 5188a6b92614355a60872d245a49af6c 170 PRINTS PR01100 Shikimate kinase family signature 78 87 3.9E-19 T 14-10-2018 Afer_0225 5188a6b92614355a60872d245a49af6c 170 PRINTS PR01100 Shikimate kinase family signature 32 45 3.9E-19 T 14-10-2018 Afer_0225 5188a6b92614355a60872d245a49af6c 170 PRINTS PR01100 Shikimate kinase family signature 8 23 3.9E-19 T 14-10-2018 Afer_0225 5188a6b92614355a60872d245a49af6c 170 PRINTS PR01100 Shikimate kinase family signature 60 68 3.9E-19 T 14-10-2018 Afer_0225 5188a6b92614355a60872d245a49af6c 170 PRINTS PR01100 Shikimate kinase family signature 98 115 3.9E-19 T 14-10-2018 Afer_1992 05d8ea3730cc354493fe0a2f2149b698 394 Gene3D G3DSA:3.30.70.360 186 301 1.9E-128 T 14-10-2018 Afer_1992 05d8ea3730cc354493fe0a2f2149b698 394 Pfam PF01546 Peptidase family M20/M25/M40 76 387 8.7E-33 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Afer_1992 05d8ea3730cc354493fe0a2f2149b698 394 Pfam PF07687 Peptidase dimerisation domain 190 283 5.3E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Afer_1992 05d8ea3730cc354493fe0a2f2149b698 394 SUPERFAMILY SSF53187 7 392 6.6E-74 T 14-10-2018 Afer_1992 05d8ea3730cc354493fe0a2f2149b698 394 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 382 3.3E-102 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Afer_1992 05d8ea3730cc354493fe0a2f2149b698 394 PIRSF PIRSF005962 3 394 3.4E-113 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 Afer_1992 05d8ea3730cc354493fe0a2f2149b698 394 Gene3D G3DSA:3.40.630.10 18 378 1.9E-128 T 14-10-2018 Afer_1992 05d8ea3730cc354493fe0a2f2149b698 394 SUPERFAMILY SSF55031 188 297 9.29E-31 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Afer_0894 0efb1e431c86865dc5d3e5090e6af3bc 260 Pfam PF13344 Haloacid dehalogenase-like hydrolase 3 96 1.1E-22 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Afer_0894 0efb1e431c86865dc5d3e5090e6af3bc 260 SUPERFAMILY SSF56784 3 231 4.36E-47 T 14-10-2018 IPR036412 HAD-like superfamily Afer_0894 0efb1e431c86865dc5d3e5090e6af3bc 260 Gene3D G3DSA:3.40.50.1000 4 231 2.4E-65 T 14-10-2018 IPR023214 HAD superfamily Afer_0894 0efb1e431c86865dc5d3e5090e6af3bc 260 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 4 223 1.2E-32 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA Afer_0894 0efb1e431c86865dc5d3e5090e6af3bc 260 Pfam PF13242 HAD-hyrolase-like 178 235 1.4E-7 T 14-10-2018 Afer_0894 0efb1e431c86865dc5d3e5090e6af3bc 260 Gene3D G3DSA:3.40.50.1000 68 178 2.4E-65 T 14-10-2018 IPR023214 HAD superfamily Afer_1964 449099d4da1ae766daff3cee78103e9f 828 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 284 296 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 135 0.0011 T 14-10-2018 IPR004176 Clp, N-terminal Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.2E-10 T 14-10-2018 IPR004176 Clp, N-terminal Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Pfam PF07724 AAA domain (Cdc48 subfamily) 589 732 8.1E-47 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Gene3D G3DSA:3.40.50.300 338 537 1.5E-70 T 14-10-2018 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 SMART SM00382 188 332 3.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1964 449099d4da1ae766daff3cee78103e9f 828 SMART SM00382 590 739 3.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 738 818 2.6E-24 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Gene3D G3DSA:1.10.1780.10 1 140 6.4E-35 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 668 686 9.2E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 701 715 9.2E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 594 612 9.2E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 639 657 9.2E-39 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 SUPERFAMILY SSF52540 539 822 5.94E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Gene3D G3DSA:3.40.50.300 543 736 6.0E-83 T 14-10-2018 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 624 642 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 SMART SM01086 738 827 1.1E-35 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Afer_1964 449099d4da1ae766daff3cee78103e9f 828 SUPERFAMILY SSF81923 4 146 3.79E-35 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 193 325 1.2E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 SUPERFAMILY SSF52540 148 538 2.19E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Gene3D G3DSA:1.10.8.60 738 828 3.1E-27 T 14-10-2018 Afer_1964 449099d4da1ae766daff3cee78103e9f 828 Gene3D G3DSA:3.40.50.300 147 337 5.2E-73 T 14-10-2018 Afer_1202 f0e36ebe3c22cb19e5b75411ced257f3 487 Gene3D G3DSA:3.40.605.10 23 477 1.6E-177 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Afer_1202 f0e36ebe3c22cb19e5b75411ced257f3 487 SUPERFAMILY SSF53720 10 485 1.23E-169 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Afer_1202 f0e36ebe3c22cb19e5b75411ced257f3 487 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 258 265 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Afer_1202 f0e36ebe3c22cb19e5b75411ced257f3 487 Gene3D G3DSA:3.40.309.10 265 454 1.6E-177 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Afer_1202 f0e36ebe3c22cb19e5b75411ced257f3 487 Pfam PF00171 Aldehyde dehydrogenase family 22 480 5.7E-170 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Afer_0985 cc13d46bcafdb00d8b43b0185dcbdd70 253 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 3 224 2.0E-51 T 14-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 Afer_0985 cc13d46bcafdb00d8b43b0185dcbdd70 253 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 4 223 2.9E-44 T 14-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 Afer_0985 cc13d46bcafdb00d8b43b0185dcbdd70 253 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 3 46 3.4E-10 T 14-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 SMART SM01003 4 136 8.1E-44 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 361 1.7E-65 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 SMART SM01002 145 308 1.5E-74 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 6 136 2.5E-33 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 169 194 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 Gene3D G3DSA:3.40.50.720 136 315 2.8E-129 T 14-10-2018 Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 SUPERFAMILY SSF51735 136 311 4.83E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 Gene3D G3DSA:3.40.50.720 3 358 2.8E-129 T 14-10-2018 Afer_1980 a031d9c8a04ac20520ac19813ea8bfc4 365 SUPERFAMILY SSF52283 1 167 3.66E-41 T 14-10-2018 Afer_0957 e96ef59444d21ae755492e86aa3ead15 153 Pfam PF02577 Bifunctional nuclease 41 145 2.2E-15 T 14-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 Afer_0957 e96ef59444d21ae755492e86aa3ead15 153 Gene3D G3DSA:3.10.690.10 18 149 2.4E-18 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Afer_0957 e96ef59444d21ae755492e86aa3ead15 153 SUPERFAMILY SSF103256 21 146 2.22E-16 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 Afer_0631 4f34757bf4e352049762bbc6993df818 385 SUPERFAMILY SSF55347 120 260 1.11E-55 T 14-10-2018 Afer_0631 4f34757bf4e352049762bbc6993df818 385 Gene3D G3DSA:3.40.50.720 1 144 1.2E-35 T 14-10-2018 Afer_0631 4f34757bf4e352049762bbc6993df818 385 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 382 1.8E-117 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Afer_0631 4f34757bf4e352049762bbc6993df818 385 PIRSF PIRSF006205 1 384 6.5E-128 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Afer_0631 4f34757bf4e352049762bbc6993df818 385 Pfam PF13288 DXP reductoisomerase C-terminal domain 257 373 9.2E-33 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Afer_0631 4f34757bf4e352049762bbc6993df818 385 Gene3D G3DSA:1.10.1740.10 299 384 8.1E-28 T 14-10-2018 Afer_0631 4f34757bf4e352049762bbc6993df818 385 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 140 225 1.8E-37 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Afer_0631 4f34757bf4e352049762bbc6993df818 385 SUPERFAMILY SSF69055 290 381 1.83E-28 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Afer_0631 4f34757bf4e352049762bbc6993df818 385 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 126 2.3E-28 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Afer_0631 4f34757bf4e352049762bbc6993df818 385 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 378 41.993 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 Afer_0631 4f34757bf4e352049762bbc6993df818 385 SUPERFAMILY SSF51735 3 144 1.29E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1727 b92f06d9059259e1e126cff5f392f8b6 258 SUPERFAMILY SSF56219 3 257 2.22E-72 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Afer_1727 b92f06d9059259e1e126cff5f392f8b6 258 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 29 38 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Afer_1727 b92f06d9059259e1e126cff5f392f8b6 258 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 3 257 9.1E-73 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 Afer_1727 b92f06d9059259e1e126cff5f392f8b6 258 Gene3D G3DSA:3.60.10.10 3 257 1.1E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily Afer_1727 b92f06d9059259e1e126cff5f392f8b6 258 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 250 8.4E-19 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase Afer_1727 b92f06d9059259e1e126cff5f392f8b6 258 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 3 256 7.7E-69 T 14-10-2018 Afer_0273 61374a81fd70087b3f130af82f7604c4 317 SUPERFAMILY SSF52768 15 311 6.84E-99 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily Afer_0273 61374a81fd70087b3f130af82f7604c4 317 Gene3D G3DSA:3.40.800.10 7 317 5.0E-113 T 14-10-2018 Afer_0273 61374a81fd70087b3f130af82f7604c4 317 ProSitePatterns PS01053 Arginase family signature. 238 259 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Afer_0273 61374a81fd70087b3f130af82f7604c4 317 TIGRFAM TIGR01230 agmatinase: agmatinase 34 308 3.3E-70 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 Afer_0273 61374a81fd70087b3f130af82f7604c4 317 Pfam PF00491 Arginase family 36 306 4.6E-94 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Afer_0273 61374a81fd70087b3f130af82f7604c4 317 PIRSF PIRSF036979 17 313 5.4E-105 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 123 611 4.2E-211 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 209 341 1.3E-44 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 Pfam PF06480 FtsH Extracellular 30 103 5.6E-7 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 24 640 35.9 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 Gene3D G3DSA:1.20.58.760 423 620 2.9E-69 T 14-10-2018 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 SMART SM00382 205 344 7.9E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 SUPERFAMILY SSF140990 423 614 3.4E-64 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 SUPERFAMILY SSF52540 164 412 2.16E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 ProSitePatterns PS00674 AAA-protein family signature. 312 330 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 Gene3D G3DSA:1.10.8.60 344 420 6.1E-28 T 14-10-2018 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 Pfam PF01434 Peptidase family M41 403 609 5.9E-69 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 Afer_1606 becce96d6ebbfd1c4e675e67b3489169 660 Gene3D G3DSA:3.40.50.300 157 343 7.9E-70 T 14-10-2018 Afer_0503 7c6c51a6f11135ff94498db62b2c58ad 429 SUPERFAMILY SSF53822 49 416 2.09E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Afer_0503 7c6c51a6f11135ff94498db62b2c58ad 429 Gene3D G3DSA:3.40.50.2300 53 364 1.0E-36 T 14-10-2018 Afer_0503 7c6c51a6f11135ff94498db62b2c58ad 429 Pfam PF13458 Periplasmic binding protein 49 347 3.6E-32 T 14-10-2018 IPR028081 Leucine-binding protein domain Afer_0503 7c6c51a6f11135ff94498db62b2c58ad 429 Gene3D G3DSA:3.40.50.2300 165 302 1.0E-36 T 14-10-2018 Afer_0639 9b56c74f6eb9eaffce84a10606a54c1b 127 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 13 97 6.0E-8 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Afer_0639 9b56c74f6eb9eaffce84a10606a54c1b 127 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 10 115 2.8E-17 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Afer_0639 9b56c74f6eb9eaffce84a10606a54c1b 127 ProSitePatterns PS01319 Ribosome-binding factor A signature. 76 97 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 Afer_0639 9b56c74f6eb9eaffce84a10606a54c1b 127 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 10 110 19.351 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Afer_0639 9b56c74f6eb9eaffce84a10606a54c1b 127 SUPERFAMILY SSF89919 7 113 1.57E-19 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily Afer_0639 9b56c74f6eb9eaffce84a10606a54c1b 127 Pfam PF02033 Ribosome-binding factor A 11 109 1.8E-21 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 Afer_0639 9b56c74f6eb9eaffce84a10606a54c1b 127 Gene3D G3DSA:3.30.300.20 9 101 5.3E-21 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Afer_0895 98c7151c10599bf6b436d936267271f9 349 Pfam PF01791 DeoC/LacD family aldolase 68 325 8.5E-61 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Afer_0895 98c7151c10599bf6b436d936267271f9 349 Gene3D G3DSA:3.20.20.70 51 349 1.0E-65 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0895 98c7151c10599bf6b436d936267271f9 349 SUPERFAMILY SSF51569 56 343 3.22E-63 T 14-10-2018 Afer_0895 98c7151c10599bf6b436d936267271f9 349 SMART SM01133 67 325 3.9E-38 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1126 1272 3.1E-36 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 SUPERFAMILY SSF52518 450 861 5.36E-85 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Gene3D G3DSA:3.40.50.970 495 858 1.1E-145 T 14-10-2018 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Gene3D G3DSA:3.40.50.12470 878 1143 1.1E-144 T 14-10-2018 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Pfam PF00676 Dehydrogenase E1 component 541 857 5.1E-55 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 18 49 1.4E-8 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Gene3D G3DSA:1.10.287.1150 412 494 7.8E-23 T 14-10-2018 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 SUPERFAMILY SSF52518 907 1124 2.78E-43 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 SMART SM00861 919 1121 7.6E-39 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Pfam PF02779 Transketolase, pyrimidine binding domain 918 1120 1.5E-56 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 407 1271 1.6E-299 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Gene3D G3DSA:3.40.50.11610 1064 1270 1.1E-144 T 14-10-2018 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Gene3D G3DSA:3.30.559.10 125 389 1.4E-50 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 SUPERFAMILY SSF52777 142 379 2.45E-48 T 14-10-2018 Afer_1732 200a937ebd22fc0b33b9537d8f9715ae 1277 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 143 378 3.8E-49 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Afer_0823 481b3ab73ce85ba115a82571aa1f12eb 358 Pfam PF00676 Dehydrogenase E1 component 39 321 6.5E-76 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 Afer_0823 481b3ab73ce85ba115a82571aa1f12eb 358 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 13 348 2.4E-130 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Afer_0823 481b3ab73ce85ba115a82571aa1f12eb 358 SUPERFAMILY SSF52518 32 350 1.11E-92 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0823 481b3ab73ce85ba115a82571aa1f12eb 358 Gene3D G3DSA:3.40.50.970 2 354 1.2E-106 T 14-10-2018 Afer_0097 fa7abd17bc14370fad7426423837c364 306 SUPERFAMILY SSF53850 5 188 6.86E-53 T 14-10-2018 Afer_0097 fa7abd17bc14370fad7426423837c364 306 Gene3D G3DSA:3.30.70.260 186 281 4.1E-27 T 14-10-2018 Afer_0097 fa7abd17bc14370fad7426423837c364 306 PIRSF PIRSF001500 2 278 1.2E-74 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Afer_0097 fa7abd17bc14370fad7426423837c364 306 Gene3D G3DSA:3.40.190.10 8 182 6.2E-57 T 14-10-2018 Afer_0097 fa7abd17bc14370fad7426423837c364 306 SUPERFAMILY SSF55021 179 274 5.8E-21 T 14-10-2018 Afer_0097 fa7abd17bc14370fad7426423837c364 306 Pfam PF00800 Prephenate dehydratase 6 184 6.1E-58 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Afer_0097 fa7abd17bc14370fad7426423837c364 306 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 224 231 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Afer_0097 fa7abd17bc14370fad7426423837c364 306 Gene3D G3DSA:3.40.190.10 87 174 6.2E-57 T 14-10-2018 Afer_0097 fa7abd17bc14370fad7426423837c364 306 Pfam PF01842 ACT domain 202 262 2.6E-10 T 14-10-2018 IPR002912 ACT domain Afer_1110 f514e573a0867f6249652e5234ae84e2 344 Gene3D G3DSA:3.90.1150.10 15 338 5.0E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1110 f514e573a0867f6249652e5234ae84e2 344 Pfam PF00155 Aminotransferase class I and II 25 339 3.4E-42 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Afer_1110 f514e573a0867f6249652e5234ae84e2 344 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 1 343 47.482 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Afer_1110 f514e573a0867f6249652e5234ae84e2 344 SUPERFAMILY SSF53383 16 343 1.95E-69 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1110 f514e573a0867f6249652e5234ae84e2 344 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 20 342 4.9E-85 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 Afer_1110 f514e573a0867f6249652e5234ae84e2 344 Gene3D G3DSA:3.40.640.10 47 252 5.0E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 SUPERFAMILY SSF56317 3 251 4.58E-60 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 Pfam PF02540 NAD synthase 301 545 1.1E-65 T 14-10-2018 IPR022310 NAD/GMP synthase Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 TIGRFAM TIGR00552 nadE: NAD+ synthetase 308 547 1.1E-55 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 Pfam PF00795 Carbon-nitrogen hydrolase 9 244 9.8E-28 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 PIRSF PIRSF006630 1 571 2.0E-183 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 4 571 28.592 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 ProSitePatterns PS00920 Nitrilases / cyanide hydratase signature 1. 36 51 - T 14-10-2018 IPR000132 Nitrilase/cyanide hydratase, conserved site GO:0016810 Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 Gene3D G3DSA:3.40.50.620 297 570 1.8E-102 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 SUPERFAMILY SSF52402 294 554 1.17E-69 T 14-10-2018 Afer_0246 e434db948c2f00fedfb6f01667d2dc49 571 Gene3D G3DSA:3.60.110.10 2 267 1.5E-92 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Afer_0847 2a90d19a5ecac050a04c8deda8371a5a 285 Gene3D G3DSA:3.40.50.300 2 155 7.4E-7 T 14-10-2018 Afer_0847 2a90d19a5ecac050a04c8deda8371a5a 285 SUPERFAMILY SSF52540 5 154 4.2E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0847 2a90d19a5ecac050a04c8deda8371a5a 285 Pfam PF03668 P-loop ATPase protein family 4 283 9.4E-87 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Afer_0847 2a90d19a5ecac050a04c8deda8371a5a 285 PIRSF PIRSF005052 2 285 2.1E-96 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Afer_0847 2a90d19a5ecac050a04c8deda8371a5a 285 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 2 283 38.612 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 Afer_0375 3f6f1fcd588316f899a1a9d0c0d725b4 512 Pfam PF00361 Proton-conducting membrane transporter 128 419 9.3E-60 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0375 3f6f1fcd588316f899a1a9d0c0d725b4 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 2.5E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0375 3f6f1fcd588316f899a1a9d0c0d725b4 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 2.5E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0375 3f6f1fcd588316f899a1a9d0c0d725b4 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 2.5E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0375 3f6f1fcd588316f899a1a9d0c0d725b4 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 2.5E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0375 3f6f1fcd588316f899a1a9d0c0d725b4 512 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 2.5E-32 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0375 3f6f1fcd588316f899a1a9d0c0d725b4 512 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 4 485 2.8E-151 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 SUPERFAMILY SSF54292 10 74 5.52E-10 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Gene3D G3DSA:2.20.25.90 259 312 1.4E-16 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 SUPERFAMILY SSF53706 260 825 5.76E-188 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 SMART SM00929 83 124 2.0E-5 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 SUPERFAMILY SSF50692 787 935 4.75E-40 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Gene3D G3DSA:3.10.20.740 7 124 3.7E-22 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 264 933 4.0E-247 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Gene3D G3DSA:2.40.40.20 813 936 2.1E-31 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Gene3D G3DSA:3.40.228.10 393 592 3.4E-165 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Gene3D G3DSA:3.30.70.20 127 208 1.0E-20 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Pfam PF00384 Molybdopterin oxidoreductase 315 738 1.7E-77 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Pfam PF01568 Molydopterin dinucleotide binding domain 823 930 2.4E-22 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 SUPERFAMILY SSF54862 79 212 3.18E-27 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 260 311 4.9E-13 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 90 121 6.3E-9 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Gene3D G3DSA:3.40.50.740 320 781 3.4E-165 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 74 3.9E-9 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 PIRSF PIRSF036643 2 967 0.0 T 14-10-2018 Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 Pfam PF00037 4Fe-4S binding domain 141 157 1.2E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_0821 983f8974dc65c601f8ab4ab8f2a7b54b 985 SMART SM00926 259 312 1.0E-11 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 Gene3D G3DSA:1.10.220.30 199 336 1.4E-47 T 14-10-2018 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 PIRSF PIRSF003161 2 336 1.2E-98 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 SUPERFAMILY SSF48029 119 329 2.35E-59 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Afer_0138 0defbaa11efcae5bea65840d566e878f 337 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 4 334 2.6E-94 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 1.5E-62 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 1.5E-62 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 37 63 1.5E-62 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 1.5E-62 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 117 140 1.5E-62 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 1.5E-62 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 PRINTS PR00954 Flagellar motor switch protein FliG signature 8 24 1.5E-62 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 Gene3D G3DSA:1.10.220.30 102 193 1.6E-23 T 14-10-2018 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 SUPERFAMILY SSF48029 8 103 6.93E-18 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical Afer_0138 0defbaa11efcae5bea65840d566e878f 337 Pfam PF01706 FliG C-terminal domain 222 328 3.2E-39 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal Afer_0138 0defbaa11efcae5bea65840d566e878f 337 Pfam PF14842 FliG N-terminal domain 8 109 1.1E-24 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain Afer_0138 0defbaa11efcae5bea65840d566e878f 337 Gene3D G3DSA:1.10.220.30 1 84 2.0E-14 T 14-10-2018 Afer_0138 0defbaa11efcae5bea65840d566e878f 337 Pfam PF14841 FliG middle domain 119 192 2.3E-22 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 Gene3D G3DSA:3.40.50.300 174 349 1.2E-48 T 14-10-2018 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 Pfam PF01926 50S ribosome-binding GTPase 3 118 1.9E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 Pfam PF01926 50S ribosome-binding GTPase 179 296 3.8E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 Gene3D G3DSA:3.40.50.300 1 160 1.1E-41 T 14-10-2018 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 243 4.4E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 179 199 4.4E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 SUPERFAMILY SSF52540 137 426 9.06E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 425 9.6E-141 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 Hamap MF_00195 GTPase Der [der]. 1 428 33.296 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 337 2.3E-28 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 157 5.2E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 PIRSF PIRSF006485 1 429 1.7E-139 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 352 425 2.0E-23 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 Gene3D G3DSA:3.30.300.20 352 427 3.1E-22 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Afer_1347 18f5899810c1b74ffe04a9cd03021c53 429 SUPERFAMILY SSF52540 3 161 1.01E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1609 9a7999f0daa2d65fb35b89eb0669dd0d 297 Pfam PF02585 GlcNAc-PI de-N-acetylase 17 160 1.7E-21 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Afer_1609 9a7999f0daa2d65fb35b89eb0669dd0d 297 SUPERFAMILY SSF102588 13 273 4.84E-54 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Afer_1609 9a7999f0daa2d65fb35b89eb0669dd0d 297 Gene3D G3DSA:3.40.50.10320 11 291 1.1E-66 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 Gene3D G3DSA:3.30.470.20 177 311 1.2E-43 T 14-10-2018 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 88 2.1E-22 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 SMART SM01210 314 408 7.2E-28 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 SUPERFAMILY SSF52440 1 89 9.06E-21 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Afer_1957 58abc5875d083291c0b1c552d62412cf 408 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 275 282 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 SUPERFAMILY SSF51246 313 406 3.3E-22 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 Gene3D G3DSA:3.40.50.20 1 83 2.6E-19 T 14-10-2018 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 405 8.1E-118 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 Gene3D G3DSA:3.90.600.10 314 407 6.1E-23 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 89 281 3.3E-59 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 SMART SM01209 89 281 2.3E-100 T 14-10-2018 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 408 35.516 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 Gene3D G3DSA:3.30.1490.20 107 176 1.2E-17 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 SUPERFAMILY SSF56059 90 305 1.33E-50 T 14-10-2018 Afer_1957 58abc5875d083291c0b1c552d62412cf 408 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 315 404 1.7E-19 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 Afer_1714 da42ddd076159bb49d4dda039712bcb4 145 Gene3D G3DSA:1.10.940.10 10 142 1.2E-33 T 14-10-2018 IPR035926 NusB-like superfamily Afer_1714 da42ddd076159bb49d4dda039712bcb4 145 SUPERFAMILY SSF48013 12 127 5.1E-30 T 14-10-2018 IPR035926 NusB-like superfamily Afer_1714 da42ddd076159bb49d4dda039712bcb4 145 Pfam PF01029 NusB family 16 128 4.0E-28 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 Afer_1714 da42ddd076159bb49d4dda039712bcb4 145 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 14 129 2.0E-32 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Afer_1714 da42ddd076159bb49d4dda039712bcb4 145 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 10 132 19.214 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 Pfam PF01321 Creatinase/Prolidase N-terminal domain 31 154 4.7E-7 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 Gene3D G3DSA:3.90.230.10 153 379 2.3E-67 T 14-10-2018 Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 Gene3D G3DSA:3.40.350.10 28 117 1.6E-10 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 PRINTS PR00599 Methionine aminopeptidase-1 signature 236 252 4.8E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 PRINTS PR00599 Methionine aminopeptidase-1 signature 334 346 4.8E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 PRINTS PR00599 Methionine aminopeptidase-1 signature 304 316 4.8E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 SUPERFAMILY SSF53092 33 90 2.27E-6 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 Pfam PF00557 Metallopeptidase family M24 162 364 8.4E-54 T 14-10-2018 IPR000994 Peptidase M24 Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 313 325 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site Afer_1712 af1ba9293122334691eee9cb83d6eae7 391 SUPERFAMILY SSF55920 159 374 4.71E-62 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like Afer_0139 5cb5290b552376eabee3454e0ca2eccd 206 Pfam PF02108 Flagellar assembly protein FliH 73 195 3.9E-6 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE Afer_1022 4a67589c940de192681cd48b1773da2f 81 Pfam PF11127 Protein of unknown function (DUF2892) 1 64 1.1E-14 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 Afer_0952 9f1245f9fc5382cc099920b398d42cc5 138 Gene3D G3DSA:3.30.420.140 6 138 8.6E-37 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 Afer_0952 9f1245f9fc5382cc099920b398d42cc5 138 Pfam PF03652 Holliday junction resolvase 8 134 2.7E-33 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Afer_0952 9f1245f9fc5382cc099920b398d42cc5 138 SMART SM00732 7 103 1.5E-24 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 Afer_0952 9f1245f9fc5382cc099920b398d42cc5 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 7 138 21.466 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Afer_0952 9f1245f9fc5382cc099920b398d42cc5 138 SUPERFAMILY SSF53098 7 134 2.12E-31 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0952 9f1245f9fc5382cc099920b398d42cc5 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 10 134 1.3E-25 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 Gene3D G3DSA:3.30.160.20 209 295 3.3E-90 T 14-10-2018 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 Pfam PF00472 RF-1 domain 209 319 6.9E-40 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 7 354 4.0E-142 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 SMART SM00937 64 177 3.0E-41 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 Gene3D G3DSA:1.20.58.410 5 101 2.6E-8 T 14-10-2018 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 Gene3D G3DSA:3.30.70.1660 110 339 3.3E-90 T 14-10-2018 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 2 355 35.899 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 Pfam PF03462 PCRF domain 10 202 4.5E-60 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 Afer_1808 d1f417bb57145a094c50be1dee1d8ab2 357 SUPERFAMILY SSF75620 10 351 3.66E-122 T 14-10-2018 Afer_1387 825ae9240e2ccb546c20239c7a86cd09 508 Pfam PF05598 Transposase domain (DUF772) 53 122 3.2E-18 T 14-10-2018 IPR008490 Transposase InsH, N-terminal Afer_1387 825ae9240e2ccb546c20239c7a86cd09 508 Pfam PF13751 Transposase DDE domain 381 492 1.5E-23 T 14-10-2018 IPR025668 Transposase DDE domain Afer_1387 825ae9240e2ccb546c20239c7a86cd09 508 Pfam PF01609 Transposase DDE domain 263 357 6.7E-10 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 Afer_1610 42c778bc81c3972ec4d18aecd76d9a96 343 SUPERFAMILY SSF53822 38 148 2.55E-6 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Afer_1610 42c778bc81c3972ec4d18aecd76d9a96 343 Gene3D G3DSA:3.40.50.2300 28 151 1.8E-9 T 14-10-2018 Afer_0628 52b036a9693f3171d5214b5b33b08818 239 Gene3D G3DSA:3.40.1160.10 2 239 2.6E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Afer_0628 52b036a9693f3171d5214b5b33b08818 239 SUPERFAMILY SSF53633 5 238 1.31E-59 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Afer_0628 52b036a9693f3171d5214b5b33b08818 239 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 239 40.383 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Afer_0628 52b036a9693f3171d5214b5b33b08818 239 Pfam PF00696 Amino acid kinase family 7 219 8.3E-22 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Afer_0628 52b036a9693f3171d5214b5b33b08818 239 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 238 2.7E-84 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 Afer_0628 52b036a9693f3171d5214b5b33b08818 239 PIRSF PIRSF005650 2 239 5.3E-86 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 Afer_1736 681e2e9e86b89220e08b2e2a2f776d99 143 Gene3D G3DSA:2.60.40.790 2 130 2.6E-30 T 14-10-2018 IPR008978 HSP20-like chaperone Afer_1736 681e2e9e86b89220e08b2e2a2f776d99 143 Pfam PF00011 Hsp20/alpha crystallin family 32 129 4.8E-23 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain Afer_1736 681e2e9e86b89220e08b2e2a2f776d99 143 SUPERFAMILY SSF49764 6 130 7.85E-32 T 14-10-2018 IPR008978 HSP20-like chaperone Afer_0104 20447a8c46d34e6ad96b30b1306c6a3f 137 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 6 131 2.4E-41 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 Afer_0104 20447a8c46d34e6ad96b30b1306c6a3f 137 SUPERFAMILY SSF54593 5 134 4.93E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Afer_0104 20447a8c46d34e6ad96b30b1306c6a3f 137 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 116 7.8E-20 T 14-10-2018 Afer_0104 20447a8c46d34e6ad96b30b1306c6a3f 137 Gene3D G3DSA:3.10.180.10 4 132 9.0E-37 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Afer_1564 2947ba787bcc6d7548afafc829e0f4d5 197 Gene3D G3DSA:3.90.550.10 2 191 3.9E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1564 2947ba787bcc6d7548afafc829e0f4d5 197 SUPERFAMILY SSF53448 3 184 3.15E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1564 2947ba787bcc6d7548afafc829e0f4d5 197 Pfam PF12804 MobA-like NTP transferase domain 5 162 1.3E-25 T 14-10-2018 IPR025877 MobA-like NTP transferase Afer_1009 177b51db95c700ae3110b5445f946d81 357 SUPERFAMILY SSF51569 8 354 1.34E-67 T 14-10-2018 Afer_1009 177b51db95c700ae3110b5445f946d81 357 PIRSF PIRSF036915 1 357 1.9E-110 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Afer_1009 177b51db95c700ae3110b5445f946d81 357 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 350 6.1E-68 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Afer_1009 177b51db95c700ae3110b5445f946d81 357 TIGRFAM TIGR00876 tal_mycobact: transaldolase 11 349 2.1E-85 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Afer_1009 177b51db95c700ae3110b5445f946d81 357 Gene3D G3DSA:3.20.20.70 4 352 4.4E-128 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1009 177b51db95c700ae3110b5445f946d81 357 ProSitePatterns PS00958 Transaldolase active site. 137 154 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 Afer_1009 177b51db95c700ae3110b5445f946d81 357 Hamap MF_00493 Transaldolase [tal]. 1 357 112.182 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 Afer_0647 87aea9fd2a3121100baf12036a7fe683 551 SMART SM00849 18 211 4.7E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_0647 87aea9fd2a3121100baf12036a7fe683 551 Gene3D G3DSA:3.60.15.10 8 429 2.4E-141 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_0647 87aea9fd2a3121100baf12036a7fe683 551 Pfam PF00753 Metallo-beta-lactamase superfamily 15 168 8.7E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_0647 87aea9fd2a3121100baf12036a7fe683 551 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 545 1.5E-126 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 Afer_0647 87aea9fd2a3121100baf12036a7fe683 551 SUPERFAMILY SSF56281 7 420 1.69E-80 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_0647 87aea9fd2a3121100baf12036a7fe683 551 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 403 6.1E-9 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain Afer_0647 87aea9fd2a3121100baf12036a7fe683 551 Gene3D G3DSA:3.10.20.580 446 548 5.9E-16 T 14-10-2018 Afer_0647 87aea9fd2a3121100baf12036a7fe683 551 Gene3D G3DSA:3.40.50.10710 203 363 2.4E-141 T 14-10-2018 Afer_2037 fed87887780bc4c078ca4b693ae505c9 117 Pfam PF00825 Ribonuclease P 5 106 5.6E-14 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 Afer_2037 fed87887780bc4c078ca4b693ae505c9 117 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 Afer_2037 fed87887780bc4c078ca4b693ae505c9 117 SUPERFAMILY SSF54211 4 106 1.49E-14 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_2037 fed87887780bc4c078ca4b693ae505c9 117 Gene3D G3DSA:3.30.230.10 2 112 1.0E-15 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_1923 0cb0145eb611610a7ac9f56842390fe6 220 SUPERFAMILY SSF51735 5 132 5.37E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1923 0cb0145eb611610a7ac9f56842390fe6 220 Gene3D G3DSA:3.40.50.720 3 140 3.6E-35 T 14-10-2018 Afer_1923 0cb0145eb611610a7ac9f56842390fe6 220 SUPERFAMILY SSF116726 142 213 2.62E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 Afer_1923 0cb0145eb611610a7ac9f56842390fe6 220 PRINTS PR00335 TrkA potassium uptake protein signature 5 19 6.0E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Afer_1923 0cb0145eb611610a7ac9f56842390fe6 220 PRINTS PR00335 TrkA potassium uptake protein signature 22 36 6.0E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Afer_1923 0cb0145eb611610a7ac9f56842390fe6 220 PRINTS PR00335 TrkA potassium uptake protein signature 75 89 6.0E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Afer_1923 0cb0145eb611610a7ac9f56842390fe6 220 PRINTS PR00335 TrkA potassium uptake protein signature 51 61 6.0E-9 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 Afer_1923 0cb0145eb611610a7ac9f56842390fe6 220 Pfam PF02254 TrkA-N domain 6 119 2.7E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 Afer_1084 5a38a50f28e81dca61b216cdf6f0d611 461 Gene3D G3DSA:3.30.465.40 3 225 5.4E-57 T 14-10-2018 Afer_1084 5a38a50f28e81dca61b216cdf6f0d611 461 Pfam PF01565 FAD binding domain 41 178 1.3E-32 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Afer_1084 5a38a50f28e81dca61b216cdf6f0d611 461 SUPERFAMILY SSF55103 217 455 1.8E-44 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Afer_1084 5a38a50f28e81dca61b216cdf6f0d611 461 Gene3D G3DSA:3.30.70.2740 339 413 2.6E-10 T 14-10-2018 Afer_1084 5a38a50f28e81dca61b216cdf6f0d611 461 Gene3D G3DSA:1.10.45.10 414 453 5.7E-7 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Afer_1084 5a38a50f28e81dca61b216cdf6f0d611 461 SUPERFAMILY SSF56176 2 213 1.71E-56 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_1084 5a38a50f28e81dca61b216cdf6f0d611 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 452 8.4E-39 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Afer_0311 a93a366bde3838313ec5d5cfcaf84a76 460 Gene3D G3DSA:3.40.50.300 44 252 2.7E-30 T 14-10-2018 Afer_0311 a93a366bde3838313ec5d5cfcaf84a76 460 SUPERFAMILY SSF52540 48 324 5.6E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 414 436 3.2E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 86 106 3.2E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 357 379 3.2E-6 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 66 123 2.4E-22 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 3 619 6.0E-193 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 112 132 1.7E-59 T 14-10-2018 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 415 434 1.7E-59 T 14-10-2018 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 159 180 1.7E-59 T 14-10-2018 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 314 326 1.7E-59 T 14-10-2018 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 224 245 1.7E-59 T 14-10-2018 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 246 272 1.7E-59 T 14-10-2018 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 84 109 1.7E-59 T 14-10-2018 Afer_0374 7d60a7639dd17ab6fa8e1bee295eed49 625 Pfam PF00361 Proton-conducting membrane transporter 135 422 3.7E-76 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_1200 05b3142efe4dbc75d63656469380b321 867 Gene3D G3DSA:3.40.50.261 487 591 5.0E-16 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_1200 05b3142efe4dbc75d63656469380b321 867 Gene3D G3DSA:3.40.50.261 593 677 4.6E-8 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_1200 05b3142efe4dbc75d63656469380b321 867 Gene3D G3DSA:3.40.50.720 201 326 1.7E-36 T 14-10-2018 Afer_1200 05b3142efe4dbc75d63656469380b321 867 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 349 483 8.3E-36 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain Afer_1200 05b3142efe4dbc75d63656469380b321 867 Gene3D G3DSA:3.30.470.20 695 845 5.4E-6 T 14-10-2018 Afer_1200 05b3142efe4dbc75d63656469380b321 867 SMART SM00881 202 297 1.6E-24 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Afer_1200 05b3142efe4dbc75d63656469380b321 867 Pfam PF00583 Acetyltransferase (GNAT) family 77 160 1.4E-10 T 14-10-2018 IPR000182 GNAT domain Afer_1200 05b3142efe4dbc75d63656469380b321 867 SUPERFAMILY SSF51735 201 327 5.91E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1200 05b3142efe4dbc75d63656469380b321 867 Gene3D G3DSA:3.40.630.30 18 200 2.4E-50 T 14-10-2018 Afer_1200 05b3142efe4dbc75d63656469380b321 867 Gene3D G3DSA:3.40.50.261 327 485 1.3E-37 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_1200 05b3142efe4dbc75d63656469380b321 867 SUPERFAMILY SSF52210 489 672 1.2E-17 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_1200 05b3142efe4dbc75d63656469380b321 867 SUPERFAMILY SSF55729 29 167 1.89E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_1200 05b3142efe4dbc75d63656469380b321 867 SUPERFAMILY SSF52210 326 482 3.14E-23 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 Afer_1200 05b3142efe4dbc75d63656469380b321 867 Pfam PF13380 CoA binding domain 207 331 2.3E-18 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 SMART SM00271 2 60 9.0E-32 T 14-10-2018 IPR001623 DnaJ domain Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 Pfam PF01556 DnaJ C terminal domain 115 333 1.1E-34 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 370 36.797 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 3 349 4.9E-118 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 SUPERFAMILY SSF49493 257 344 2.09E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 SUPERFAMILY SSF46565 2 101 3.61E-33 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 Gene3D G3DSA:1.10.287.110 2 111 1.5E-33 T 14-10-2018 IPR036869 Chaperone J-domain superfamily Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 PRINTS PR00625 DnaJ domain signature 60 79 8.6E-25 T 14-10-2018 IPR001623 DnaJ domain Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 PRINTS PR00625 DnaJ domain signature 40 60 8.6E-25 T 14-10-2018 IPR001623 DnaJ domain Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 PRINTS PR00625 DnaJ domain signature 23 38 8.6E-25 T 14-10-2018 IPR001623 DnaJ domain Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 PRINTS PR00625 DnaJ domain signature 5 23 8.6E-25 T 14-10-2018 IPR001623 DnaJ domain Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 Gene3D G3DSA:2.10.230.10 142 206 4.8E-33 T 14-10-2018 Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 Pfam PF00226 DnaJ domain 3 65 1.4E-27 T 14-10-2018 IPR001623 DnaJ domain Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 SUPERFAMILY SSF57938 129 209 9.94E-19 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 SUPERFAMILY SSF49493 109 259 2.35E-16 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 ProSitePatterns PS00636 Nt-dnaJ domain signature. 45 64 - T 14-10-2018 IPR018253 DnaJ domain, conserved site Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 Gene3D G3DSA:2.60.260.20 253 362 7.4E-28 T 14-10-2018 Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 Pfam PF00684 DnaJ central domain 142 206 9.3E-14 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 Afer_1293 9f0e80ef0d132f53d5c50293182703ed 372 Gene3D G3DSA:2.60.260.20 112 248 4.8E-33 T 14-10-2018 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 SUPERFAMILY SSF52540 493 809 6.51E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Gene3D G3DSA:3.40.50.300 160 350 1.6E-70 T 14-10-2018 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 324 1.1E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 SMART SM01086 720 809 6.5E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 SUPERFAMILY SSF81923 3 143 2.75E-31 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 SMART SM00382 207 352 2.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 SMART SM00382 544 692 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Gene3D G3DSA:1.10.8.60 353 488 3.0E-43 T 14-10-2018 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Gene3D G3DSA:3.40.50.300 496 718 3.7E-88 T 14-10-2018 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Gene3D G3DSA:1.10.1780.10 1 148 1.2E-56 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Pfam PF07724 AAA domain (Cdc48 subfamily) 543 714 3.6E-55 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 611 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 655 669 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 1.6E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Gene3D G3DSA:1.10.8.60 720 815 8.1E-28 T 14-10-2018 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Gene3D G3DSA:4.10.860.10 416 474 3.0E-43 T 14-10-2018 Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 3.4E-16 T 14-10-2018 IPR004176 Clp, N-terminal Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 65 4.5E-17 T 14-10-2018 IPR004176 Clp, N-terminal Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 SUPERFAMILY SSF52540 168 474 7.71E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1903 aa1f05d0e9efe1e8c5a2255878f22ece 829 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 720 800 4.1E-23 T 14-10-2018 IPR019489 Clp ATPase, C-terminal Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 513 527 1.0E-23 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 1.0E-23 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 469 485 1.0E-23 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 1.0E-23 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 SUPERFAMILY SSF55681 115 577 2.01E-94 T 14-10-2018 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 SUPERFAMILY SSF50249 11 113 8.76E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 Gene3D G3DSA:2.40.50.140 10 110 2.0E-25 T 14-10-2018 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 SUPERFAMILY SSF55261 294 413 9.81E-26 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 Gene3D G3DSA:3.30.1360.30 277 415 1.9E-170 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 12 579 30.019 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 Pfam PF02938 GAD domain 318 402 2.7E-16 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 13 575 2.2E-191 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 124 553 3.1E-92 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 Pfam PF01336 OB-fold nucleic acid binding domain 29 105 2.0E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 Afer_0534 a1e007e6bb541a3b4b0612dc578380d4 588 Gene3D G3DSA:3.30.930.10 122 576 1.9E-170 T 14-10-2018 Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 18 323 3.8E-118 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 16 341 59.175 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 SUPERFAMILY SSF53067 18 318 1.42E-34 T 14-10-2018 Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 Gene3D G3DSA:3.30.420.40 142 303 4.5E-116 T 14-10-2018 Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 90 110 8.0E-47 T 14-10-2018 IPR017861 Kae1/TsaD family Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 111 130 8.0E-47 T 14-10-2018 IPR017861 Kae1/TsaD family Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 273 282 8.0E-47 T 14-10-2018 IPR017861 Kae1/TsaD family Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 19 32 8.0E-47 T 14-10-2018 IPR017861 Kae1/TsaD family Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 167 188 8.0E-47 T 14-10-2018 IPR017861 Kae1/TsaD family Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 144 156 8.0E-47 T 14-10-2018 IPR017861 Kae1/TsaD family Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 Gene3D G3DSA:3.30.420.40 18 323 4.5E-116 T 14-10-2018 Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 Pfam PF00814 Glycoprotease family 38 316 9.7E-93 T 14-10-2018 IPR000905 Gcp-like domain Afer_0442 f707f7c9f0ce26feac6daa829a9bd9ad 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 19 316 3.5E-101 T 14-10-2018 IPR017861 Kae1/TsaD family Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 SUPERFAMILY SSF110324 3 78 3.49E-30 T 14-10-2018 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 26.57 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 1.2E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 PRINTS PR00063 Ribosomal protein L27 signature 54 78 2.7E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 PRINTS PR00063 Ribosomal protein L27 signature 4 28 2.7E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 PRINTS PR00063 Ribosomal protein L27 signature 29 53 2.7E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 65 3.0E-10 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 Gene3D G3DSA:2.40.50.100 20 84 2.9E-27 T 14-10-2018 Afer_0772 c18cbf610d05fd950ba718d08702c0aa 88 Pfam PF01016 Ribosomal L27 protein 3 80 7.5E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0183 27eab7c8010d599631d172c1b2d634c1 325 Pfam PF06737 Transglycosylase-like domain 249 319 4.2E-21 T 14-10-2018 IPR010618 Transglycosylase-like Afer_0183 27eab7c8010d599631d172c1b2d634c1 325 Gene3D G3DSA:1.10.530.10 221 325 5.6E-27 T 14-10-2018 Afer_0183 27eab7c8010d599631d172c1b2d634c1 325 SUPERFAMILY SSF53955 248 324 9.68E-25 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Afer_0563 1d96e4e65f2f6cda87f3a1c0861b0737 249 Gene3D G3DSA:3.40.50.300 6 242 7.3E-51 T 14-10-2018 Afer_0563 1d96e4e65f2f6cda87f3a1c0861b0737 249 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 239 1.9E-67 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 Afer_0563 1d96e4e65f2f6cda87f3a1c0861b0737 249 Pfam PF00005 ABC transporter 21 168 8.1E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0563 1d96e4e65f2f6cda87f3a1c0861b0737 249 SMART SM00382 30 220 5.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0563 1d96e4e65f2f6cda87f3a1c0861b0737 249 SUPERFAMILY SSF52540 4 228 5.32E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1621 4ebfe784b6b783592a938c70505f62b4 91 Gene3D G3DSA:3.40.1620.10 1 39 4.1E-8 T 14-10-2018 Afer_1621 4ebfe784b6b783592a938c70505f62b4 91 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 42 7.1E-11 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM Afer_1621 4ebfe784b6b783592a938c70505f62b4 91 SUPERFAMILY SSF143120 1 43 5.36E-9 T 14-10-2018 IPR036165 YefM-like superfamily Afer_1621 4ebfe784b6b783592a938c70505f62b4 91 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 41 9.8E-11 T 14-10-2018 Afer_1149 b88b9995c7de198881191577f93d5369 654 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 6 632 4.7E-188 T 14-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 Afer_1149 b88b9995c7de198881191577f93d5369 654 Pfam PF00501 AMP-binding enzyme 104 517 6.5E-52 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_1149 b88b9995c7de198881191577f93d5369 654 Pfam PF13193 AMP-binding enzyme C-terminal domain 534 601 1.0E-5 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_1149 b88b9995c7de198881191577f93d5369 654 ProSitePatterns PS00455 Putative AMP-binding domain signature. 260 271 - T 14-10-2018 IPR020845 AMP-binding, conserved site Afer_1149 b88b9995c7de198881191577f93d5369 654 Gene3D G3DSA:3.30.300.30 515 638 8.8E-10 T 14-10-2018 Afer_1149 b88b9995c7de198881191577f93d5369 654 Gene3D G3DSA:3.40.50.12780 83 512 7.6E-62 T 14-10-2018 Afer_1149 b88b9995c7de198881191577f93d5369 654 SUPERFAMILY SSF56801 38 622 5.89E-110 T 14-10-2018 Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 167 1.7E-13 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 Gene3D G3DSA:3.30.300.20 186 287 3.0E-20 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 SUPERFAMILY SSF54814 186 287 4.45E-19 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 Pfam PF07650 KH domain 209 275 7.5E-6 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 SUPERFAMILY SSF52540 15 211 4.3E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 TIGRFAM TIGR00436 era: GTP-binding protein Era 13 261 6.4E-39 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 Hamap MF_00367 GTPase Era [era]. 10 287 26.867 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 Pfam PF01926 50S ribosome-binding GTPase 15 117 3.7E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_1268 dd2ba3eceea6f47c4cade8d2a9ddb8ab 287 Gene3D G3DSA:3.40.50.300 9 184 5.7E-37 T 14-10-2018 Afer_0900 d865de0f93639fe569f986dbae74833b 757 TIGRFAM TIGR03551 F420_cofH: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit 406 746 2.0E-133 T 14-10-2018 IPR019940 CofH family GO:0016765 KEGG: 00680+2.5.1.77 Afer_0900 d865de0f93639fe569f986dbae74833b 757 Hamap MF_01611 FO synthase subunit 1 [cofG]. 29 348 42.518 T 14-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 Afer_0900 d865de0f93639fe569f986dbae74833b 757 Pfam PF04055 Radical SAM superfamily 37 210 8.9E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_0900 d865de0f93639fe569f986dbae74833b 757 SUPERFAMILY SSF102114 410 712 3.27E-47 T 14-10-2018 Afer_0900 d865de0f93639fe569f986dbae74833b 757 SMART SM00729 33 255 2.1E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_0900 d865de0f93639fe569f986dbae74833b 757 Gene3D G3DSA:3.20.20.70 388 744 4.3E-48 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0900 d865de0f93639fe569f986dbae74833b 757 Gene3D G3DSA:3.20.20.70 2 295 1.1E-45 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0900 d865de0f93639fe569f986dbae74833b 757 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 433 747 5.2E-103 T 14-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 Afer_0900 d865de0f93639fe569f986dbae74833b 757 SUPERFAMILY SSF102114 11 324 6.15E-38 T 14-10-2018 Afer_0900 d865de0f93639fe569f986dbae74833b 757 Pfam PF04055 Radical SAM superfamily 442 605 1.1E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_0900 d865de0f93639fe569f986dbae74833b 757 TIGRFAM TIGR03550 F420_cofG: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit 30 345 1.0E-108 T 14-10-2018 IPR019939 CofG family GO:0009108|GO:0016765|GO:0051539 KEGG: 00680+2.5.1.77 Afer_1460 cdf1b9e29c671518af4df1a8d0837e58 766 SMART SM00487 82 286 1.5E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Afer_1460 cdf1b9e29c671518af4df1a8d0837e58 766 SUPERFAMILY SSF52540 93 417 6.91E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1460 cdf1b9e29c671518af4df1a8d0837e58 766 SMART SM00490 327 408 3.1E-15 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1460 cdf1b9e29c671518af4df1a8d0837e58 766 Pfam PF00270 DEAD/DEAH box helicase 89 235 7.2E-19 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Afer_1460 cdf1b9e29c671518af4df1a8d0837e58 766 Gene3D G3DSA:3.40.50.300 291 434 6.3E-24 T 14-10-2018 Afer_1460 cdf1b9e29c671518af4df1a8d0837e58 766 Gene3D G3DSA:3.40.50.300 66 271 1.3E-32 T 14-10-2018 Afer_1460 cdf1b9e29c671518af4df1a8d0837e58 766 Pfam PF00271 Helicase conserved C-terminal domain 308 408 5.2E-14 T 14-10-2018 IPR001650 Helicase, C-terminal Afer_1322 df07450944e01e34edbb9b606d0f8051 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 2.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 489 507 2.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 186 199 2.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 528 550 2.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 2.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 2.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 PRINTS PR00985 Leucyl-tRNA synthetase signature 563 573 2.1E-51 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 814 20.822 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 618 7.9E-19 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Gene3D G3DSA:3.10.20.590 754 815 1.9E-14 T 14-10-2018 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 1.0E-58 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Gene3D G3DSA:2.30.210.10 578 590 1.5E-244 T 14-10-2018 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Gene3D G3DSA:1.10.730.10 601 751 7.3E-35 T 14-10-2018 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Gene3D G3DSA:3.40.50.620 34 577 1.5E-244 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Pfam PF08264 Anticodon-binding domain of tRNA 664 779 9.5E-14 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Gene3D G3DSA:3.90.740.10 228 416 1.5E-244 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 6 576 1.4E-238 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 SUPERFAMILY SSF47323 628 771 2.06E-22 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 SUPERFAMILY SSF50677 226 412 3.56E-47 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 SUPERFAMILY SSF52374 5 623 3.38E-133 T 14-10-2018 Afer_1322 df07450944e01e34edbb9b606d0f8051 815 Pfam PF09334 tRNA synthetases class I (M) 36 177 1.6E-17 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 1.8E-57 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 Pfam PF03144 Elongation factor Tu domain 2 226 295 1.1E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 Gene3D G3DSA:2.40.30.10 208 335 1.9E-53 T 14-10-2018 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 SUPERFAMILY SSF50465 299 394 1.75E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 SUPERFAMILY SSF52540 5 220 1.58E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.1E-222 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 PRINTS PR00315 GTP-binding elongation factor signature 79 89 1.8E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 PRINTS PR00315 GTP-binding elongation factor signature 132 141 1.8E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 PRINTS PR00315 GTP-binding elongation factor signature 59 67 1.8E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.8E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 PRINTS PR00315 GTP-binding elongation factor signature 95 106 1.8E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 59.738 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 1.5E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 7.4E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 Gene3D G3DSA:3.40.50.300 1 204 9.0E-71 T 14-10-2018 Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 SUPERFAMILY SSF50447 206 302 4.16E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_0396 b16b9feb77830039182ec2ef9bae9d1f 395 Gene3D G3DSA:2.40.30.10 339 394 3.3E-27 T 14-10-2018 Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 Gene3D G3DSA:3.30.565.10 334 475 1.9E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 Pfam PF12282 Signal transduction histidine kinase 8 138 1.0E-24 T 14-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 Pfam PF07568 Histidine kinase 277 343 5.8E-22 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 Gene3D G3DSA:3.30.450.280 2 123 4.7E-17 T 14-10-2018 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 SUPERFAMILY SSF55874 353 470 1.22E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 471 4.4E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 426 3.0E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 3.0E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.0E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 SMART SM00387 371 472 2.8E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0352 e932a612bbdddc2b19f78bf4ddf5935d 475 Gene3D G3DSA:3.30.450.20 126 263 2.8E-32 T 14-10-2018 Afer_1711 b68f937849ced33bfe8c37e352d14b95 297 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site Afer_1711 b68f937849ced33bfe8c37e352d14b95 297 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 16 291 1.4E-96 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Afer_1711 b68f937849ced33bfe8c37e352d14b95 297 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 12 293 19.574 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 Afer_1711 b68f937849ced33bfe8c37e352d14b95 297 Pfam PF01040 UbiA prenyltransferase family 28 274 2.5E-60 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 Afer_1711 b68f937849ced33bfe8c37e352d14b95 297 Gene3D G3DSA:1.10.357.140 24 177 1.5E-17 T 14-10-2018 Afer_1973 61b202b8cf69e52e2b5017fcabe65b06 110 Gene3D G3DSA:1.10.10.60 23 101 4.0E-15 T 14-10-2018 Afer_1973 61b202b8cf69e52e2b5017fcabe65b06 110 Pfam PF01527 Transposase 15 90 7.9E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_1973 61b202b8cf69e52e2b5017fcabe65b06 110 SUPERFAMILY SSF46689 18 102 1.61E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1561 11074f2a4e64285f46021052af679181 126 PIRSF PIRSF000077 1 104 1.4E-27 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Afer_1561 11074f2a4e64285f46021052af679181 126 SUPERFAMILY SSF52833 5 105 5.96E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_1561 11074f2a4e64285f46021052af679181 126 PRINTS PR00421 Thioredoxin family signature 29 38 2.1E-8 T 14-10-2018 Afer_1561 11074f2a4e64285f46021052af679181 126 PRINTS PR00421 Thioredoxin family signature 68 79 2.1E-8 T 14-10-2018 Afer_1561 11074f2a4e64285f46021052af679181 126 PRINTS PR00421 Thioredoxin family signature 21 29 2.1E-8 T 14-10-2018 Afer_1561 11074f2a4e64285f46021052af679181 126 Pfam PF00085 Thioredoxin 5 101 4.1E-25 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Afer_1561 11074f2a4e64285f46021052af679181 126 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Afer_1561 11074f2a4e64285f46021052af679181 126 Gene3D G3DSA:3.40.30.10 2 106 2.1E-28 T 14-10-2018 Afer_1561 11074f2a4e64285f46021052af679181 126 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 7.1E-31 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Afer_1472 d7e713dcc4446e653814f0e623010ad8 468 SUPERFAMILY SSF53067 3 223 5.18E-32 T 14-10-2018 Afer_1472 d7e713dcc4446e653814f0e623010ad8 468 PIRSF PIRSF000538 1 424 3.8E-51 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 Afer_1472 d7e713dcc4446e653814f0e623010ad8 468 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 264 421 2.1E-17 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Afer_1472 d7e713dcc4446e653814f0e623010ad8 468 SUPERFAMILY SSF53067 225 422 6.33E-22 T 14-10-2018 Afer_1472 d7e713dcc4446e653814f0e623010ad8 468 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 221 1.7E-17 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 Afer_1472 d7e713dcc4446e653814f0e623010ad8 468 Gene3D G3DSA:3.30.420.40 225 456 1.2E-27 T 14-10-2018 Afer_1472 d7e713dcc4446e653814f0e623010ad8 468 Gene3D G3DSA:3.30.420.40 1 224 2.0E-35 T 14-10-2018 Afer_1206 51c99445029ba541f2a900e4a456f454 302 SMART SM00382 29 211 5.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1206 51c99445029ba541f2a900e4a456f454 302 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1206 51c99445029ba541f2a900e4a456f454 302 Pfam PF00005 ABC transporter 20 163 4.3E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1206 51c99445029ba541f2a900e4a456f454 302 Gene3D G3DSA:3.40.50.300 2 228 1.5E-58 T 14-10-2018 Afer_1206 51c99445029ba541f2a900e4a456f454 302 SUPERFAMILY SSF52540 4 223 2.13E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0237 a1fe24ee8a25179fd6724cb2a0dd0b45 353 Gene3D G3DSA:3.40.50.300 9 349 1.5E-61 T 14-10-2018 Afer_0237 a1fe24ee8a25179fd6724cb2a0dd0b45 353 Pfam PF02374 Anion-transporting ATPase 13 277 5.1E-25 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Afer_0237 a1fe24ee8a25179fd6724cb2a0dd0b45 353 SUPERFAMILY SSF52540 13 276 5.7E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0597 73d25e96c3d0b0f32f0d13b21c88504f 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 212 226 2.1E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_0597 73d25e96c3d0b0f32f0d13b21c88504f 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 2.1E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_0597 73d25e96c3d0b0f32f0d13b21c88504f 281 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 2.1E-7 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_0597 73d25e96c3d0b0f32f0d13b21c88504f 281 Gene3D G3DSA:3.40.50.1820 19 269 9.9E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0597 73d25e96c3d0b0f32f0d13b21c88504f 281 SUPERFAMILY SSF53474 21 268 3.48E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0597 73d25e96c3d0b0f32f0d13b21c88504f 281 Pfam PF12697 Alpha/beta hydrolase family 39 259 8.8E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 16.613 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 61 1.8E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 Pfam PF01632 Ribosomal protein L35 2 58 5.8E-21 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 SUPERFAMILY SSF143034 2 62 1.57E-18 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 Gene3D G3DSA:2.40.50.530 1 63 3.5E-19 T 14-10-2018 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.1E-16 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.1E-16 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Afer_1677 f63c0058d9462caeca7d4c4bd9290ed1 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.1E-16 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 Afer_1742 15ad884f577fead115cc2b8b8df30bcd 1032 SUPERFAMILY SSF50952 593 921 3.53E-6 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Afer_1742 15ad884f577fead115cc2b8b8df30bcd 1032 SUPERFAMILY SSF101898 387 660 6.28E-5 T 14-10-2018 Afer_1742 15ad884f577fead115cc2b8b8df30bcd 1032 Pfam PF08486 Stage II sporulation protein 204 308 8.2E-24 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal Afer_1231 6c9718d98eba850a5b335f12ef6bb6c2 222 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 99 1.1E-15 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal Afer_1231 6c9718d98eba850a5b335f12ef6bb6c2 222 TIGRFAM TIGR01915 npdG: NADPH-dependent F420 reductase 3 209 7.0E-49 T 14-10-2018 IPR010185 NADPH-dependent F420 reductase GO:0006740|GO:0016651|GO:0050661|GO:0055114|GO:0070967 Afer_1231 6c9718d98eba850a5b335f12ef6bb6c2 222 SUPERFAMILY SSF51735 3 208 1.26E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1231 6c9718d98eba850a5b335f12ef6bb6c2 222 Gene3D G3DSA:3.40.50.720 2 214 8.7E-45 T 14-10-2018 Afer_0455 ee3ab8f38f3c6b552d36cd7d3386ee9a 125 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 117 8.8E-21 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Afer_0455 ee3ab8f38f3c6b552d36cd7d3386ee9a 125 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 122 16.655 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Afer_0455 ee3ab8f38f3c6b552d36cd7d3386ee9a 125 TIGRFAM TIGR00494 crcB: protein CrcB 5 121 1.1E-24 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Afer_1908 038b96da9a3236b20be44db853013a51 281 Pfam PF02569 Pantoate-beta-alanine ligase 4 273 1.5E-89 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Afer_1908 038b96da9a3236b20be44db853013a51 281 Gene3D G3DSA:3.30.1300.10 178 280 3.4E-18 T 14-10-2018 Afer_1908 038b96da9a3236b20be44db853013a51 281 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 5 276 3.9E-80 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Afer_1908 038b96da9a3236b20be44db853013a51 281 Hamap MF_00158 Pantothenate synthetase [panC]. 3 276 36.426 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 Afer_1908 038b96da9a3236b20be44db853013a51 281 SUPERFAMILY SSF52374 4 276 3.44E-91 T 14-10-2018 Afer_1908 038b96da9a3236b20be44db853013a51 281 Gene3D G3DSA:3.40.50.620 2 177 1.5E-70 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0406 450663eed99146ec905f1be75537b91b 78 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 2 61 14.275 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0406 450663eed99146ec905f1be75537b91b 78 Pfam PF00831 Ribosomal L29 protein 6 60 3.8E-18 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0406 450663eed99146ec905f1be75537b91b 78 TIGRFAM TIGR00012 L29: ribosomal protein uL29 6 60 3.8E-18 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0406 450663eed99146ec905f1be75537b91b 78 Gene3D G3DSA:1.10.287.310 2 64 8.5E-20 T 14-10-2018 Afer_0406 450663eed99146ec905f1be75537b91b 78 SUPERFAMILY SSF46561 2 60 9.55E-17 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0406 450663eed99146ec905f1be75537b91b 78 ProSitePatterns PS00579 Ribosomal protein L29 signature. 40 54 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 SUPERFAMILY SSF52374 3 344 5.36E-104 T 14-10-2018 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 SUPERFAMILY SSF47323 347 493 2.06E-27 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 Gene3D G3DSA:2.170.220.10 115 224 4.4E-138 T 14-10-2018 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 Gene3D G3DSA:3.40.50.620 4 331 4.4E-138 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0529 de215bd10d3c2f30682b6fd111293872 503 Gene3D G3DSA:1.10.730.10 336 497 6.9E-33 T 14-10-2018 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 PRINTS PR01041 Methionyl-tRNA synthetase signature 254 269 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 PRINTS PR01041 Methionyl-tRNA synthetase signature 6 19 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 PRINTS PR01041 Methionyl-tRNA synthetase signature 38 52 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 PRINTS PR01041 Methionyl-tRNA synthetase signature 86 97 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 PRINTS PR01041 Methionyl-tRNA synthetase signature 346 357 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 PRINTS PR01041 Methionyl-tRNA synthetase signature 222 233 6.4E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 Pfam PF09334 tRNA synthetases class I (M) 147 358 5.7E-57 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 Pfam PF09334 tRNA synthetases class I (M) 4 146 2.9E-44 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0529 de215bd10d3c2f30682b6fd111293872 503 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 494 41.37 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 Afer_2027 542145691d867a8797f6dacece4586e7 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 62 84 1.4E-7 T 14-10-2018 Afer_2027 542145691d867a8797f6dacece4586e7 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 2 26 1.4E-7 T 14-10-2018 Afer_2027 542145691d867a8797f6dacece4586e7 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 343 363 1.4E-7 T 14-10-2018 Afer_2027 542145691d867a8797f6dacece4586e7 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 124 148 1.4E-7 T 14-10-2018 Afer_2027 542145691d867a8797f6dacece4586e7 506 Gene3D G3DSA:1.20.1720.10 1 206 9.3E-50 T 14-10-2018 Afer_2027 542145691d867a8797f6dacece4586e7 506 SUPERFAMILY SSF103473 2 499 3.79E-58 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_2027 542145691d867a8797f6dacece4586e7 506 Pfam PF07690 Major Facilitator Superfamily 3 395 1.9E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1686 e5d2a10a5f954f7f4e80463f18446c13 163 SUPERFAMILY SSF53218 5 149 1.96E-36 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Afer_1686 e5d2a10a5f954f7f4e80463f18446c13 163 SMART SM00852 8 147 2.2E-22 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_1686 e5d2a10a5f954f7f4e80463f18446c13 163 Pfam PF00994 Probable molybdopterin binding domain 9 146 2.3E-28 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_1686 e5d2a10a5f954f7f4e80463f18446c13 163 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 5 141 7.9E-28 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_1686 e5d2a10a5f954f7f4e80463f18446c13 163 Gene3D G3DSA:3.40.980.10 1 162 1.5E-45 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Afer_1686 e5d2a10a5f954f7f4e80463f18446c13 163 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 67 80 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 Afer_0349 df42d7dd4e4460f879bbf892e5ada4a0 306 Gene3D G3DSA:3.40.50.300 4 302 2.4E-48 T 14-10-2018 Afer_0349 df42d7dd4e4460f879bbf892e5ada4a0 306 SUPERFAMILY SSF52540 8 234 4.57E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0349 df42d7dd4e4460f879bbf892e5ada4a0 306 Pfam PF02374 Anion-transporting ATPase 9 159 7.7E-20 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 7 513 40.928 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 Pfam PF00682 HMGL-like 9 277 1.7E-91 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 Gene3D G3DSA:3.30.160.270 396 505 5.1E-11 T 14-10-2018 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 SMART SM00917 373 504 9.9E-25 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 Gene3D G3DSA:1.10.238.260 284 395 1.6E-33 T 14-10-2018 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 Pfam PF08502 LeuA allosteric (dimerisation) domain 373 503 3.9E-28 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 9 501 2.0E-196 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 Gene3D G3DSA:3.20.20.70 6 280 2.0E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 SUPERFAMILY SSF51569 7 295 9.16E-96 T 14-10-2018 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 SUPERFAMILY SSF110921 397 503 4.84E-20 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 17 33 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1529 bd5b1e164a2b9b6620d31e373a06d9fb 516 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 202 215 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1896 5a560a5c70f00486830f89967967b276 217 SUPERFAMILY SSF48371 29 188 1.57E-19 T 14-10-2018 IPR016024 Armadillo-type fold Afer_1896 5a560a5c70f00486830f89967967b276 217 SMART SM00567 E-Z type HEAT repeats 82 111 740.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Afer_1896 5a560a5c70f00486830f89967967b276 217 SMART SM00567 E-Z type HEAT repeats 114 143 0.065 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Afer_1896 5a560a5c70f00486830f89967967b276 217 SMART SM00567 E-Z type HEAT repeats 145 174 5.3 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 Afer_1896 5a560a5c70f00486830f89967967b276 217 Pfam PF13646 HEAT repeats 111 186 4.9E-12 T 14-10-2018 Afer_1896 5a560a5c70f00486830f89967967b276 217 Gene3D G3DSA:1.25.10.10 67 198 3.6E-20 T 14-10-2018 IPR011989 Armadillo-like helical Afer_1800 e45b3291904e2cec481bd966c76a803b 91 Pfam PF00137 ATP synthase subunit C 24 87 3.6E-14 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 Afer_1800 e45b3291904e2cec481bd966c76a803b 91 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 33 89 2.8E-14 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Afer_1800 e45b3291904e2cec481bd966c76a803b 91 SUPERFAMILY SSF81333 17 88 2.48E-19 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily Afer_1800 e45b3291904e2cec481bd966c76a803b 91 Hamap MF_01396 ATP synthase subunit c [atpH]. 23 88 15.035 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1800 e45b3291904e2cec481bd966c76a803b 91 PRINTS PR00124 ATP synthase C subunit signature 63 88 2.1E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1800 e45b3291904e2cec481bd966c76a803b 91 PRINTS PR00124 ATP synthase C subunit signature 25 44 2.1E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1800 e45b3291904e2cec481bd966c76a803b 91 PRINTS PR00124 ATP synthase C subunit signature 46 61 2.1E-17 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1800 e45b3291904e2cec481bd966c76a803b 91 Gene3D G3DSA:1.20.20.10 13 90 2.5E-21 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1800 e45b3291904e2cec481bd966c76a803b 91 ProSitePatterns PS00605 ATP synthase c subunit signature. 53 74 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_0461 b96f3d4fa23a5e9daee55b7e814787ec 715 Gene3D G3DSA:1.10.10.160 109 188 3.6E-88 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily Afer_0461 b96f3d4fa23a5e9daee55b7e814787ec 715 Gene3D G3DSA:3.40.50.300 9 271 3.6E-88 T 14-10-2018 Afer_0461 b96f3d4fa23a5e9daee55b7e814787ec 715 Gene3D G3DSA:3.40.50.300 279 624 2.6E-114 T 14-10-2018 Afer_0461 b96f3d4fa23a5e9daee55b7e814787ec 715 SUPERFAMILY SSF52540 3 632 1.73E-177 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0461 b96f3d4fa23a5e9daee55b7e814787ec 715 Pfam PF13361 UvrD-like helicase C-terminal domain 277 606 1.7E-60 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Afer_0461 b96f3d4fa23a5e9daee55b7e814787ec 715 Pfam PF00580 UvrD/REP helicase N-terminal domain 9 271 5.4E-68 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 Afer_0461 b96f3d4fa23a5e9daee55b7e814787ec 715 Gene3D G3DSA:1.10.486.10 382 540 2.6E-114 T 14-10-2018 Afer_0694 e4bbbc212316608ed3143f7d9fb43782 415 Gene3D G3DSA:1.20.1250.20 214 406 1.5E-22 T 14-10-2018 Afer_0694 e4bbbc212316608ed3143f7d9fb43782 415 Gene3D G3DSA:1.20.1250.20 23 201 1.0E-15 T 14-10-2018 Afer_0694 e4bbbc212316608ed3143f7d9fb43782 415 Pfam PF07690 Major Facilitator Superfamily 38 366 1.3E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_0694 e4bbbc212316608ed3143f7d9fb43782 415 SUPERFAMILY SSF103473 11 401 9.16E-46 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_0655 54c1feec94144998180d71f647fa6b2e 377 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 7 120 5.3E-11 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain Afer_0655 54c1feec94144998180d71f647fa6b2e 377 Pfam PF13378 Enolase C-terminal domain-like 145 346 1.3E-23 T 14-10-2018 IPR029065 Enolase C-terminal domain-like Afer_0655 54c1feec94144998180d71f647fa6b2e 377 SUPERFAMILY SSF54826 14 121 1.45E-22 T 14-10-2018 Afer_0655 54c1feec94144998180d71f647fa6b2e 377 Gene3D G3DSA:3.20.20.120 112 343 1.2E-85 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Afer_0655 54c1feec94144998180d71f647fa6b2e 377 SUPERFAMILY SSF51604 108 346 3.67E-42 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily Afer_0655 54c1feec94144998180d71f647fa6b2e 377 Gene3D G3DSA:3.30.390.10 14 111 1.2E-85 T 14-10-2018 IPR029017 Enolase-like, N-terminal Afer_0655 54c1feec94144998180d71f647fa6b2e 377 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 356 29.64 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 Afer_0655 54c1feec94144998180d71f647fa6b2e 377 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 28 318 1.3E-63 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 Afer_0655 54c1feec94144998180d71f647fa6b2e 377 SMART SM00922 137 230 3.0E-10 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal Afer_1305 f14d26986f681961bbb70e38f4bc2c10 235 SUPERFAMILY SSF52833 2 106 4.23E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_1305 f14d26986f681961bbb70e38f4bc2c10 235 Pfam PF14559 Tetratricopeptide repeat 123 165 4.6E-8 T 14-10-2018 Afer_1305 f14d26986f681961bbb70e38f4bc2c10 235 Gene3D G3DSA:3.40.30.10 1 108 2.7E-31 T 14-10-2018 Afer_1305 f14d26986f681961bbb70e38f4bc2c10 235 Pfam PF00085 Thioredoxin 3 103 1.4E-25 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 Afer_1305 f14d26986f681961bbb70e38f4bc2c10 235 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 103 5.7E-30 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 Afer_1305 f14d26986f681961bbb70e38f4bc2c10 235 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 Gene3D G3DSA:3.30.160.20 155 222 2.5E-15 T 14-10-2018 Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 Hamap MF_00104 Ribonuclease 3 [rnc]. 11 218 23.148 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 SUPERFAMILY SSF69065 11 147 7.85E-33 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 ProSitePatterns PS00517 Ribonuclease III family signature. 43 51 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 SUPERFAMILY SSF54768 112 221 1.05E-17 T 14-10-2018 Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 Pfam PF14622 Ribonuclease-III-like 24 138 1.2E-21 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 Pfam PF00035 Double-stranded RNA binding motif 156 218 2.0E-9 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 SMART SM00535 23 149 1.6E-29 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 SMART SM00358 156 222 3.2E-13 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain Afer_1509 2ea3c4a11b32ae97664cccd377465c2e 263 Gene3D G3DSA:1.10.1520.10 4 148 2.4E-32 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 Afer_1024 f454eaf24263f981c4ea370131c22f8b 268 SUPERFAMILY SSF53448 38 261 1.85E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1024 f454eaf24263f981c4ea370131c22f8b 268 Pfam PF00535 Glycosyl transferase family 2 40 154 4.3E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_1024 f454eaf24263f981c4ea370131c22f8b 268 Gene3D G3DSA:3.90.550.10 23 267 3.4E-34 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0474 8fd25e5da07d25f2ff84ef0d362c862a 211 Pfam PF13263 PHP-associated 138 190 3.2E-6 T 14-10-2018 Afer_0474 8fd25e5da07d25f2ff84ef0d362c862a 211 SMART SM00481 3 64 1.9E-6 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Afer_0474 8fd25e5da07d25f2ff84ef0d362c862a 211 SUPERFAMILY SSF89550 2 188 7.26E-28 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Afer_0474 8fd25e5da07d25f2ff84ef0d362c862a 211 Gene3D G3DSA:3.20.20.140 1 172 2.2E-24 T 14-10-2018 Afer_1913 f3ba7dd8b54f6b34b4e07f63633a9e0f 181 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 13 176 1.7E-58 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 Afer_1913 f3ba7dd8b54f6b34b4e07f63633a9e0f 181 Gene3D G3DSA:3.40.50.2020 5 181 6.7E-59 T 14-10-2018 Afer_1913 f3ba7dd8b54f6b34b4e07f63633a9e0f 181 Pfam PF00156 Phosphoribosyl transferase domain 21 162 5.3E-20 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Afer_1913 f3ba7dd8b54f6b34b4e07f63633a9e0f 181 SUPERFAMILY SSF53271 8 180 6.59E-48 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Afer_0338 c3db34a4a7575bd259a45ca484168666 180 SUPERFAMILY SSF52833 37 171 8.14E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_0338 c3db34a4a7575bd259a45ca484168666 180 Gene3D G3DSA:3.40.30.10 24 175 1.3E-29 T 14-10-2018 Afer_0338 c3db34a4a7575bd259a45ca484168666 180 Pfam PF00578 AhpC/TSA family 44 154 4.0E-12 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Afer_1303 cf1e46f705786b2d5c4b315cdfa3afd2 335 SUPERFAMILY SSF48019 188 310 1.11E-7 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 Afer_1303 cf1e46f705786b2d5c4b315cdfa3afd2 335 Gene3D G3DSA:1.20.272.10 187 312 6.3E-9 T 14-10-2018 Afer_1192 9e9f9de8774f3e84866b11ecf997ee70 365 SUPERFAMILY SSF54001 247 354 5.89E-26 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Afer_1192 9e9f9de8774f3e84866b11ecf997ee70 365 Gene3D G3DSA:3.90.1720.10 151 362 2.2E-35 T 14-10-2018 Afer_1192 9e9f9de8774f3e84866b11ecf997ee70 365 Pfam PF00877 NlpC/P60 family 259 349 1.0E-17 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Afer_0805 190bfb72e79c77fe97ad6bf7935d407f 441 Gene3D G3DSA:3.40.50.300 66 188 7.2E-10 T 14-10-2018 Afer_0805 190bfb72e79c77fe97ad6bf7935d407f 441 SUPERFAMILY SSF52540 4 194 3.42E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0805 190bfb72e79c77fe97ad6bf7935d407f 441 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 257 418 1.1E-12 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Afer_0805 190bfb72e79c77fe97ad6bf7935d407f 441 Gene3D G3DSA:3.40.50.300 5 45 3.6E-5 T 14-10-2018 Afer_0805 190bfb72e79c77fe97ad6bf7935d407f 441 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 8 179 2.1E-12 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain Afer_0805 190bfb72e79c77fe97ad6bf7935d407f 441 SUPERFAMILY SSF52317 255 425 5.73E-15 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0308 a80671bb9bbf47fbeb92372c9664a02e 448 Pfam PF01566 Natural resistance-associated macrophage protein 69 407 6.6E-63 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 Gene3D G3DSA:3.90.950.20 251 406 9.9E-48 T 14-10-2018 IPR036653 CinA-like, C-terminal Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 Pfam PF02464 Competence-damaged protein 259 404 2.4E-46 T 14-10-2018 IPR008136 CinA, C-terminal Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 SUPERFAMILY SSF142433 252 406 1.44E-44 T 14-10-2018 IPR036653 CinA-like, C-terminal Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 SMART SM00852 4 171 3.1E-41 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 Gene3D G3DSA:3.40.980.10 2 169 1.8E-52 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 163 5.0E-28 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 SUPERFAMILY SSF53218 3 201 8.11E-41 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 3 407 1.4E-96 T 14-10-2018 IPR008135 Competence-induced protein CinA Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 Pfam PF00994 Probable molybdopterin binding domain 5 165 6.3E-32 T 14-10-2018 IPR001453 MoaB/Mog domain Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 266 403 8.9E-36 T 14-10-2018 IPR008136 CinA, C-terminal Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 420 130.9 T 14-10-2018 IPR008135 Competence-induced protein CinA Afer_0652 0df9d23409c227e316b69ddc9292c7a0 420 PIRSF PIRSF006728 1 412 3.8E-118 T 14-10-2018 IPR008135 Competence-induced protein CinA Afer_0003 61ee6285d59b1bcd678956733f759140 346 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 346 63.219 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Afer_0003 61ee6285d59b1bcd678956733f759140 346 Gene3D G3DSA:1.20.1050.90 115 293 7.8E-75 T 14-10-2018 Afer_0003 61ee6285d59b1bcd678956733f759140 346 SUPERFAMILY SSF52540 3 319 1.29E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0003 61ee6285d59b1bcd678956733f759140 346 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 317 1.9E-11 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Afer_0003 61ee6285d59b1bcd678956733f759140 346 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 2 326 2.6E-64 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 Afer_0003 61ee6285d59b1bcd678956733f759140 346 Gene3D G3DSA:3.40.50.300 4 326 7.8E-75 T 14-10-2018 Afer_1330 07d66d5adeca98afdaae5378bd411b47 316 Gene3D G3DSA:1.10.3720.10 73 310 1.9E-55 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1330 07d66d5adeca98afdaae5378bd411b47 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 303 6.0E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_1330 07d66d5adeca98afdaae5378bd411b47 316 SUPERFAMILY SSF161098 76 297 1.11E-49 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1276 bbf52d6eb445be149c2836dadf2ae096 290 SMART SM00849 43 190 7.8E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1276 bbf52d6eb445be149c2836dadf2ae096 290 SUPERFAMILY SSF56281 29 258 1.11E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1276 bbf52d6eb445be149c2836dadf2ae096 290 Pfam PF00753 Metallo-beta-lactamase superfamily 41 112 1.0E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1276 bbf52d6eb445be149c2836dadf2ae096 290 Gene3D G3DSA:3.60.15.10 117 219 8.7E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1276 bbf52d6eb445be149c2836dadf2ae096 290 Gene3D G3DSA:3.60.15.10 24 116 4.7E-19 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1485 a42d126bcedd307dc1f5fc825b7bf348 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_1485 a42d126bcedd307dc1f5fc825b7bf348 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1485 a42d126bcedd307dc1f5fc825b7bf348 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_0674 a42d126bcedd307dc1f5fc825b7bf348 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0674 a42d126bcedd307dc1f5fc825b7bf348 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0674 a42d126bcedd307dc1f5fc825b7bf348 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_0067 a42d126bcedd307dc1f5fc825b7bf348 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0067 a42d126bcedd307dc1f5fc825b7bf348 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0067 a42d126bcedd307dc1f5fc825b7bf348 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_0663 a42d126bcedd307dc1f5fc825b7bf348 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0663 a42d126bcedd307dc1f5fc825b7bf348 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0663 a42d126bcedd307dc1f5fc825b7bf348 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_0509 a42d126bcedd307dc1f5fc825b7bf348 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0509 a42d126bcedd307dc1f5fc825b7bf348 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0509 a42d126bcedd307dc1f5fc825b7bf348 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_0446 a42d126bcedd307dc1f5fc825b7bf348 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0446 a42d126bcedd307dc1f5fc825b7bf348 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0446 a42d126bcedd307dc1f5fc825b7bf348 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_0278 a42d126bcedd307dc1f5fc825b7bf348 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0278 a42d126bcedd307dc1f5fc825b7bf348 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0278 a42d126bcedd307dc1f5fc825b7bf348 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_0690 a42d126bcedd307dc1f5fc825b7bf348 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0690 a42d126bcedd307dc1f5fc825b7bf348 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0690 a42d126bcedd307dc1f5fc825b7bf348 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 Gene3D G3DSA:3.40.50.12740 5 203 1.2E-53 T 14-10-2018 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 6.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 6.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 6.2E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 157 184 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 SUPERFAMILY SSF46894 138 203 1.5E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 SMART SM00448 5 117 1.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 SMART SM00421 140 197 1.2E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 SUPERFAMILY SSF52172 5 124 6.69E-26 T 14-10-2018 IPR011006 CheY-like superfamily Afer_1981 d49d480f4af733ae00d801939ca800cc 222 Pfam PF00072 Response regulator receiver domain 7 117 9.7E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1981 d49d480f4af733ae00d801939ca800cc 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 142 196 4.8E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 Afer_0411 7ffe24177dca82545747508544351934 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.435 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z Afer_0411 7ffe24177dca82545747508544351934 61 Gene3D G3DSA:4.10.830.10 1 61 3.9E-30 T 14-10-2018 Afer_0411 7ffe24177dca82545747508544351934 61 SUPERFAMILY SSF57716 5 61 1.64E-21 T 14-10-2018 Afer_0411 7ffe24177dca82545747508544351934 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0411 7ffe24177dca82545747508544351934 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 3.1E-24 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0558 15df607a58e441e9763a22d3a6d9054a 237 SUPERFAMILY SSF52172 8 131 6.69E-45 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0558 15df607a58e441e9763a22d3a6d9054a 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 231 4.0E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_0558 15df607a58e441e9763a22d3a6d9054a 237 SUPERFAMILY SSF46894 135 232 1.11E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_0558 15df607a58e441e9763a22d3a6d9054a 237 SMART SM00448 11 122 2.5E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0558 15df607a58e441e9763a22d3a6d9054a 237 Gene3D G3DSA:3.40.50.2300 2 134 1.8E-41 T 14-10-2018 Afer_0558 15df607a58e441e9763a22d3a6d9054a 237 Gene3D G3DSA:1.10.10.10 136 237 3.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0558 15df607a58e441e9763a22d3a6d9054a 237 SMART SM00862 157 231 1.4E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_0558 15df607a58e441e9763a22d3a6d9054a 237 Pfam PF00072 Response regulator receiver domain 13 123 1.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0912 5e64710711025d881a5845ecf25a89ab 455 TIGRFAM TIGR03686 pupylate_PafA: Pup--protein ligase 6 454 3.2E-207 T 14-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 Afer_0912 5e64710711025d881a5845ecf25a89ab 455 PIRSF PIRSF018077 3 455 6.5E-170 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 Afer_0912 5e64710711025d881a5845ecf25a89ab 455 Pfam PF03136 Pup-ligase protein 7 425 7.1E-155 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 Afer_0912 5e64710711025d881a5845ecf25a89ab 455 Hamap MF_02111 Pup--protein ligase [pafA]. 4 455 49.188 T 14-10-2018 IPR022279 Pup--protein ligase GO:0010498|GO:0016879|GO:0019941 MetaCyc: PWY-7893 Afer_1146 e4e83fdfa2504fbd0d67d74de11cb032 311 Pfam PF00682 HMGL-like 8 278 1.2E-42 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Afer_1146 e4e83fdfa2504fbd0d67d74de11cb032 311 SUPERFAMILY SSF51569 5 297 3.48E-59 T 14-10-2018 Afer_1146 e4e83fdfa2504fbd0d67d74de11cb032 311 Gene3D G3DSA:3.20.20.70 3 299 4.4E-103 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1607 b2df6c7f92639842e795735b1cd7f00b 287 Gene3D G3DSA:3.20.20.370 1 267 1.7E-35 T 14-10-2018 Afer_1607 b2df6c7f92639842e795735b1cd7f00b 287 Pfam PF04794 YdjC-like protein 4 157 1.3E-17 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like Afer_1607 b2df6c7f92639842e795735b1cd7f00b 287 SUPERFAMILY SSF88713 2 263 3.78E-28 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 Afer_0287 aaf2cd2ae1d211b6955fa0ef0c6824d9 231 SUPERFAMILY SSF50475 14 184 4.17E-21 T 14-10-2018 Afer_0287 aaf2cd2ae1d211b6955fa0ef0c6824d9 231 Gene3D G3DSA:2.30.110.10 5 208 1.8E-24 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Afer_0287 aaf2cd2ae1d211b6955fa0ef0c6824d9 231 Pfam PF04299 Putative FMN-binding domain 8 164 1.2E-20 T 14-10-2018 IPR007396 Transcriptional regulator PAI 2-type Afer_0500 5559cd5fd53ce7554afab2c28d823d71 380 PIRSF PIRSF005572 1 378 4.7E-68 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Afer_0500 5559cd5fd53ce7554afab2c28d823d71 380 Gene3D G3DSA:3.90.1150.10 4 366 1.7E-78 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0500 5559cd5fd53ce7554afab2c28d823d71 380 SUPERFAMILY SSF53383 3 373 2.39E-60 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0500 5559cd5fd53ce7554afab2c28d823d71 380 Pfam PF00266 Aminotransferase class-V 3 362 2.9E-35 T 14-10-2018 IPR000192 Aminotransferase class V domain Afer_0500 5559cd5fd53ce7554afab2c28d823d71 380 Gene3D G3DSA:3.40.640.10 14 256 1.7E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1064 771228f0f32e6e7488939da85cc786fb 478 Pfam PF06738 Putative threonine/serine exporter 77 314 7.0E-52 T 14-10-2018 IPR010619 Putative threonine/serine exporter Afer_1064 771228f0f32e6e7488939da85cc786fb 478 Pfam PF12821 Threonine/Serine exporter, ThrE 339 465 5.8E-24 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE Afer_1380 2b9ad9c1fcad2da188caa864f2004684 382 Gene3D G3DSA:3.40.190.10 87 345 7.9E-31 T 14-10-2018 Afer_1380 2b9ad9c1fcad2da188caa864f2004684 382 SUPERFAMILY SSF53850 65 374 5.43E-41 T 14-10-2018 Afer_1380 2b9ad9c1fcad2da188caa864f2004684 382 Gene3D G3DSA:3.40.190.10 169 292 7.9E-31 T 14-10-2018 Afer_1380 2b9ad9c1fcad2da188caa864f2004684 382 Pfam PF13343 Bacterial extracellular solute-binding protein 122 349 1.1E-17 T 14-10-2018 Afer_1413 4429a5acc067a6ddbd547f3178fe2cf9 436 Pfam PF01979 Amidohydrolase family 46 407 6.7E-33 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Afer_1413 4429a5acc067a6ddbd547f3178fe2cf9 436 Gene3D G3DSA:3.20.20.140 50 419 3.0E-117 T 14-10-2018 Afer_1413 4429a5acc067a6ddbd547f3178fe2cf9 436 SUPERFAMILY SSF51338 14 416 1.77E-7 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_1413 4429a5acc067a6ddbd547f3178fe2cf9 436 SUPERFAMILY SSF51556 48 353 4.17E-53 T 14-10-2018 IPR032466 Metal-dependent hydrolase Afer_1413 4429a5acc067a6ddbd547f3178fe2cf9 436 Gene3D G3DSA:2.30.40.10 10 413 3.0E-117 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_1527 8a13eba1625f789a786363bb72062a94 294 SUPERFAMILY SSF48179 188 288 1.62E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Afer_1527 8a13eba1625f789a786363bb72062a94 294 Gene3D G3DSA:1.10.1040.10 190 292 5.9E-34 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 Afer_1527 8a13eba1625f789a786363bb72062a94 294 Gene3D G3DSA:3.40.50.720 1 189 2.3E-60 T 14-10-2018 Afer_1527 8a13eba1625f789a786363bb72062a94 294 PIRSF PIRSF000105 1 293 1.7E-83 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 Afer_1527 8a13eba1625f789a786363bb72062a94 294 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 284 9.6E-32 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Afer_1527 8a13eba1625f789a786363bb72062a94 294 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 185 1.4E-56 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 Afer_1527 8a13eba1625f789a786363bb72062a94 294 SUPERFAMILY SSF51735 1 185 6.57E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1297 561f10370aa2b35cc3ecbe3dfe9eee09 252 Gene3D G3DSA:2.130.10.10 19 218 9.3E-6 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Afer_1297 561f10370aa2b35cc3ecbe3dfe9eee09 252 SUPERFAMILY SSF110296 68 168 4.18E-8 T 14-10-2018 Afer_1308 0712d84c79127cb16370c71b7612aeab 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 24 192 1.8E-47 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Afer_1308 0712d84c79127cb16370c71b7612aeab 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 52.836 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 Afer_1308 0712d84c79127cb16370c71b7612aeab 234 SUPERFAMILY SSF55729 11 208 3.81E-51 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_1308 0712d84c79127cb16370c71b7612aeab 234 Gene3D G3DSA:3.40.630.70 53 214 2.6E-42 T 14-10-2018 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 SUPERFAMILY SSF51621 3 341 1.36E-92 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 5 475 4.5E-150 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 Pfam PF00224 Pyruvate kinase, barrel domain 5 343 3.2E-113 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 471 2.2E-29 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 Gene3D G3DSA:3.40.1380.20 337 471 1.9E-163 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 Gene3D G3DSA:2.40.33.10 73 168 1.9E-163 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 PRINTS PR01050 Pyruvate kinase family signature 270 294 1.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 PRINTS PR01050 Pyruvate kinase family signature 314 330 1.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 PRINTS PR01050 Pyruvate kinase family signature 62 78 1.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 PRINTS PR01050 Pyruvate kinase family signature 245 269 1.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 PRINTS PR01050 Pyruvate kinase family signature 295 313 1.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 PRINTS PR01050 Pyruvate kinase family signature 218 244 1.2E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 Gene3D G3DSA:3.20.20.60 5 336 1.9E-163 T 14-10-2018 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 SUPERFAMILY SSF50800 73 167 6.45E-15 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 SUPERFAMILY SSF52935 324 475 1.02E-35 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1114 c9c4daa10f9c70e524978cf29defa358 486 ProSitePatterns PS00110 Pyruvate kinase active site signature. 216 228 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 Afer_1439 8ec2a6a8c9dde28f4affa1109e1ad21c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 43 3.6E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1439 8ec2a6a8c9dde28f4affa1109e1ad21c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 3.6E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1439 8ec2a6a8c9dde28f4affa1109e1ad21c 125 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 3.6E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1439 8ec2a6a8c9dde28f4affa1109e1ad21c 125 Pfam PF01022 Bacterial regulatory protein, arsR family 33 79 1.3E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1439 8ec2a6a8c9dde28f4affa1109e1ad21c 125 SUPERFAMILY SSF46785 17 101 1.01E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1439 8ec2a6a8c9dde28f4affa1109e1ad21c 125 SMART SM00418 26 105 8.9E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1439 8ec2a6a8c9dde28f4affa1109e1ad21c 125 Gene3D G3DSA:1.10.10.10 11 115 8.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0777 1436051b67a662a776a80269b71e562d 241 SMART SM00382 30 212 6.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0777 1436051b67a662a776a80269b71e562d 241 SUPERFAMILY SSF52540 3 226 7.03E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0777 1436051b67a662a776a80269b71e562d 241 Pfam PF00005 ABC transporter 23 165 3.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0777 1436051b67a662a776a80269b71e562d 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0777 1436051b67a662a776a80269b71e562d 241 Gene3D G3DSA:3.40.50.300 2 234 6.3E-54 T 14-10-2018 Afer_0755 5ed7abe4265e0f498346924a799692da 139 Gene3D G3DSA:3.90.79.10 9 135 2.9E-28 T 14-10-2018 Afer_0755 5ed7abe4265e0f498346924a799692da 139 Pfam PF00293 NUDIX domain 12 130 1.8E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Afer_0755 5ed7abe4265e0f498346924a799692da 139 SUPERFAMILY SSF55811 7 134 7.18E-29 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Afer_0755 5ed7abe4265e0f498346924a799692da 139 ProSitePatterns PS00893 Nudix box signature. 40 61 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Afer_0754 a78eaf6ed328c960c30554180b5affee 199 SUPERFAMILY SSF52833 7 155 3.18E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_0754 a78eaf6ed328c960c30554180b5affee 199 Pfam PF01323 DSBA-like thioredoxin domain 8 157 1.7E-11 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 Afer_0754 a78eaf6ed328c960c30554180b5affee 199 Gene3D G3DSA:3.40.30.10 3 199 5.0E-26 T 14-10-2018 Afer_0008 6d52be9610fa9419ae9b155185fa085d 500 SUPERFAMILY SSF52540 134 446 2.52E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0008 6d52be9610fa9419ae9b155185fa085d 500 Gene3D G3DSA:3.40.50.300 216 456 2.1E-43 T 14-10-2018 Afer_0008 6d52be9610fa9419ae9b155185fa085d 500 Pfam PF00437 Type II/IV secretion system protein 240 434 7.9E-26 T 14-10-2018 IPR001482 Type II/IV secretion system protein Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Gene3D G3DSA:3.30.54.20 612 665 1.9E-44 T 14-10-2018 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 SUPERFAMILY SSF55186 540 699 3.27E-45 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 641 684 3.3E-14 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 854 150.245 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 8.2E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 PRINTS PR00980 Alanyl-tRNA synthetase signature 195 206 8.2E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 PRINTS PR00980 Alanyl-tRNA synthetase signature 222 235 8.2E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 8.2E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 8.2E-29 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Gene3D G3DSA:2.40.30.130 456 552 1.7E-11 T 14-10-2018 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Pfam PF02272 DHHA1 domain 723 852 7.3E-6 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 SUPERFAMILY SSF50447 450 540 1.59E-15 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Gene3D G3DSA:3.30.930.10 1 238 3.8E-103 T 14-10-2018 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Pfam PF01411 tRNA synthetases class II (A) 6 544 1.8E-186 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 SUPERFAMILY SSF55681 2 241 5.47E-99 T 14-10-2018 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Gene3D G3DSA:3.10.310.40 750 853 7.9E-7 T 14-10-2018 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 6 835 9.2E-245 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 Gene3D G3DSA:3.30.980.10 553 685 1.9E-44 T 14-10-2018 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 SMART SM00863 641 684 7.9E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Afer_0951 ecef7be1e4602c2fe70c7dc5c29890af 854 SUPERFAMILY SSF101353 242 447 2.35E-51 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 Afer_1838 be581b3d8e3b55c56c81f232acd71fc8 230 Pfam PF00293 NUDIX domain 80 190 4.3E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Afer_1838 be581b3d8e3b55c56c81f232acd71fc8 230 Gene3D G3DSA:3.90.79.10 58 203 1.7E-28 T 14-10-2018 Afer_1838 be581b3d8e3b55c56c81f232acd71fc8 230 SUPERFAMILY SSF55811 69 203 4.6E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Afer_1838 be581b3d8e3b55c56c81f232acd71fc8 230 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 13 45 2.6E-7 T 14-10-2018 Afer_1354 238c490472ae642a55d24ad63b372581 434 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 425 9.1E-106 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Afer_1354 238c490472ae642a55d24ad63b372581 434 Gene3D G3DSA:3.65.10.10 13 422 2.6E-123 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Afer_1354 238c490472ae642a55d24ad63b372581 434 Gene3D G3DSA:3.65.10.10 22 236 2.6E-123 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 Afer_1354 238c490472ae642a55d24ad63b372581 434 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 428 29.094 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Afer_1354 238c490472ae642a55d24ad63b372581 434 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Afer_1354 238c490472ae642a55d24ad63b372581 434 PIRSF PIRSF000505 3 430 2.7E-104 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 Afer_1354 238c490472ae642a55d24ad63b372581 434 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 13 421 1.7E-90 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 Afer_1354 238c490472ae642a55d24ad63b372581 434 SUPERFAMILY SSF55205 6 425 3.27E-102 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 Afer_1856 6ba576cc7cddefc279ebe281324f95e5 137 SUPERFAMILY SSF46785 24 120 6.73E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1856 6ba576cc7cddefc279ebe281324f95e5 137 Gene3D G3DSA:1.10.10.10 23 127 3.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1856 6ba576cc7cddefc279ebe281324f95e5 137 Pfam PF01022 Bacterial regulatory protein, arsR family 48 96 9.6E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1856 6ba576cc7cddefc279ebe281324f95e5 137 SMART SM00418 41 122 3.9E-26 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1856 6ba576cc7cddefc279ebe281324f95e5 137 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 65 76 2.8E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1856 6ba576cc7cddefc279ebe281324f95e5 137 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 93 108 2.8E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1856 6ba576cc7cddefc279ebe281324f95e5 137 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 2.8E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1856 6ba576cc7cddefc279ebe281324f95e5 137 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 78 93 2.8E-21 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 Afer_1228 1da589150886c7b74458d7ee475e36af 163 Gene3D G3DSA:3.30.428.10 1 162 1.3E-46 T 14-10-2018 IPR036265 HIT-like superfamily Afer_1228 1da589150886c7b74458d7ee475e36af 163 Pfam PF01230 HIT domain 36 127 2.5E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Afer_1228 1da589150886c7b74458d7ee475e36af 163 SUPERFAMILY SSF54197 20 159 1.11E-34 T 14-10-2018 IPR036265 HIT-like superfamily Afer_1058 6de2f13c09721065839bfd19f234ea3c 1077 Pfam PF02687 FtsX-like permease family 971 1063 1.1E-5 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Afer_1664 ed251a4843f654e696e550983a0cc836 395 Gene3D G3DSA:3.60.70.12 1 263 1.9E-80 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Afer_1664 ed251a4843f654e696e550983a0cc836 395 SUPERFAMILY SSF56266 8 391 3.14E-104 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Afer_1664 ed251a4843f654e696e550983a0cc836 395 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 35 391 7.0E-49 T 14-10-2018 Afer_1664 ed251a4843f654e696e550983a0cc836 395 Pfam PF01960 ArgJ family 13 391 2.5E-109 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Afer_1664 ed251a4843f654e696e550983a0cc836 395 Gene3D G3DSA:3.10.20.340 264 394 2.4E-25 T 14-10-2018 Afer_1664 ed251a4843f654e696e550983a0cc836 395 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 395 108.795 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 Afer_1784 f8437685c453952f258bde233ef7d2f8 152 Gene3D G3DSA:2.30.110.10 9 151 1.3E-35 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Afer_1784 f8437685c453952f258bde233ef7d2f8 152 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 12 97 9.5E-10 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Afer_1784 f8437685c453952f258bde233ef7d2f8 152 SUPERFAMILY SSF50475 8 146 5.05E-26 T 14-10-2018 Afer_1171 f8adaaa58d2d59ede36402593389771d 424 Gene3D G3DSA:1.20.1250.20 228 424 2.0E-27 T 14-10-2018 Afer_1171 f8adaaa58d2d59ede36402593389771d 424 SUPERFAMILY SSF103473 220 415 6.8E-31 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1171 f8adaaa58d2d59ede36402593389771d 424 Pfam PF07690 Major Facilitator Superfamily 241 417 1.0E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1171 f8adaaa58d2d59ede36402593389771d 424 SUPERFAMILY SSF103473 14 192 2.22E-19 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1171 f8adaaa58d2d59ede36402593389771d 424 Gene3D G3DSA:1.20.1250.20 12 202 1.7E-14 T 14-10-2018 Afer_1577 c1296497cc885de01fd501b98e614d28 750 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 633 735 2.1E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_1577 c1296497cc885de01fd501b98e614d28 750 SMART SM00387 632 737 2.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_1577 c1296497cc885de01fd501b98e614d28 750 Pfam PF00512 His Kinase A (phospho-acceptor) domain 528 593 3.7E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_1577 c1296497cc885de01fd501b98e614d28 750 SUPERFAMILY SSF47384 514 594 1.08E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Afer_1577 c1296497cc885de01fd501b98e614d28 750 Gene3D G3DSA:3.30.565.10 608 744 3.7E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1577 c1296497cc885de01fd501b98e614d28 750 Gene3D G3DSA:1.10.287.130 517 598 1.1E-19 T 14-10-2018 Afer_1577 c1296497cc885de01fd501b98e614d28 750 Pfam PF00005 ABC transporter 35 170 7.0E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1577 c1296497cc885de01fd501b98e614d28 750 SUPERFAMILY SSF52540 19 224 8.68E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1577 c1296497cc885de01fd501b98e614d28 750 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1577 c1296497cc885de01fd501b98e614d28 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 734 5.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_1577 c1296497cc885de01fd501b98e614d28 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 670 684 5.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_1577 c1296497cc885de01fd501b98e614d28 750 PRINTS PR00344 Bacterial sensor protein C-terminal signature 698 716 5.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_1577 c1296497cc885de01fd501b98e614d28 750 SMART SM00382 44 218 6.7E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1577 c1296497cc885de01fd501b98e614d28 750 Gene3D G3DSA:3.40.50.300 12 235 3.3E-57 T 14-10-2018 Afer_1577 c1296497cc885de01fd501b98e614d28 750 Gene3D G3DSA:3.30.450.40 269 403 4.3E-5 T 14-10-2018 IPR029016 GAF-like domain superfamily Afer_1577 c1296497cc885de01fd501b98e614d28 750 SMART SM00388 525 593 2.5E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_1577 c1296497cc885de01fd501b98e614d28 750 SUPERFAMILY SSF55874 583 735 2.62E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1577 c1296497cc885de01fd501b98e614d28 750 SUPERFAMILY SSF55781 299 403 7.46E-5 T 14-10-2018 Afer_0298 51f9cadee5e0484baa0c184acf53dd9b 437 Gene3D G3DSA:3.90.1720.10 232 426 1.4E-33 T 14-10-2018 Afer_0298 51f9cadee5e0484baa0c184acf53dd9b 437 SUPERFAMILY SSF54001 311 423 3.6E-28 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Afer_0298 51f9cadee5e0484baa0c184acf53dd9b 437 Pfam PF00877 NlpC/P60 family 327 405 1.4E-17 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Afer_1767 393795d461607821885c80e4a6ed7454 89 Pfam PF03966 Trm112p-like protein 6 44 9.3E-6 T 14-10-2018 IPR005651 Trm112-like Afer_1767 393795d461607821885c80e4a6ed7454 89 Gene3D G3DSA:2.20.25.10 11 63 8.8E-15 T 14-10-2018 Afer_1767 393795d461607821885c80e4a6ed7454 89 SUPERFAMILY SSF158997 4 58 3.66E-13 T 14-10-2018 Afer_1681 a54599766ded4519ba2df7f406043648 291 Gene3D G3DSA:3.30.70.120 220 291 1.7E-19 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Afer_1681 a54599766ded4519ba2df7f406043648 291 SUPERFAMILY SSF54913 219 290 2.45E-16 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Afer_1681 a54599766ded4519ba2df7f406043648 291 SUPERFAMILY SSF53850 2 216 5.61E-46 T 14-10-2018 Afer_1681 a54599766ded4519ba2df7f406043648 291 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 195 290 4.6E-27 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Afer_1681 a54599766ded4519ba2df7f406043648 291 Gene3D G3DSA:3.40.190.10 3 196 2.5E-53 T 14-10-2018 Afer_1681 a54599766ded4519ba2df7f406043648 291 Pfam PF01634 ATP phosphoribosyltransferase 50 205 7.0E-39 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Afer_1681 a54599766ded4519ba2df7f406043648 291 Pfam PF08029 HisG, C-terminal domain 216 288 7.8E-22 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Afer_1681 a54599766ded4519ba2df7f406043648 291 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 189 3.2E-50 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 Afer_1681 a54599766ded4519ba2df7f406043648 291 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 1 291 26.87 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 Afer_1681 a54599766ded4519ba2df7f406043648 291 Gene3D G3DSA:3.40.190.10 89 183 2.5E-53 T 14-10-2018 Afer_1331 876ceb0908db7a62d620dfd3ae698bd2 464 Gene3D G3DSA:3.40.190.10 88 412 4.0E-100 T 14-10-2018 Afer_1331 876ceb0908db7a62d620dfd3ae698bd2 464 SUPERFAMILY SSF53850 44 460 9.71E-79 T 14-10-2018 Afer_1331 876ceb0908db7a62d620dfd3ae698bd2 464 Gene3D G3DSA:3.40.190.10 184 453 4.0E-100 T 14-10-2018 Afer_1331 876ceb0908db7a62d620dfd3ae698bd2 464 Pfam PF01547 Bacterial extracellular solute-binding protein 82 376 2.8E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein Afer_1991 f325cac594cffed750025a5077385fd8 310 Gene3D G3DSA:3.60.15.10 6 258 3.6E-58 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1991 f325cac594cffed750025a5077385fd8 310 SUPERFAMILY SSF56281 2 270 2.23E-56 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1991 f325cac594cffed750025a5077385fd8 310 Pfam PF00753 Metallo-beta-lactamase superfamily 18 221 9.6E-24 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1991 f325cac594cffed750025a5077385fd8 310 SMART SM00849 22 221 1.9E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_0497 aaecbbc5b5b1aa2450637eb805301b42 289 Gene3D G3DSA:3.30.420.40 6 279 4.1E-56 T 14-10-2018 Afer_0497 aaecbbc5b5b1aa2450637eb805301b42 289 Pfam PF00480 ROK family 6 280 5.2E-41 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 Afer_0497 aaecbbc5b5b1aa2450637eb805301b42 289 Gene3D G3DSA:3.30.420.40 122 268 4.1E-56 T 14-10-2018 Afer_0497 aaecbbc5b5b1aa2450637eb805301b42 289 SUPERFAMILY SSF53067 5 281 7.3E-45 T 14-10-2018 Afer_1393 efe8d1d9020baf31ff64fa17e6e3982a 993 Gene3D G3DSA:3.40.50.300 69 269 5.2E-11 T 14-10-2018 Afer_1393 efe8d1d9020baf31ff64fa17e6e3982a 993 Gene3D G3DSA:3.40.50.300 434 598 1.2E-8 T 14-10-2018 Afer_1393 efe8d1d9020baf31ff64fa17e6e3982a 993 SUPERFAMILY SSF52540 10 276 4.73E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1393 efe8d1d9020baf31ff64fa17e6e3982a 993 SUPERFAMILY SSF52540 88 565 4.59E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1393 efe8d1d9020baf31ff64fa17e6e3982a 993 Pfam PF04851 Type III restriction enzyme, res subunit 10 250 1.8E-14 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 Afer_0731 f41f1f31844bf0853b2049e5f549cd6e 258 Gene3D G3DSA:3.30.930.10 1 184 9.5E-37 T 14-10-2018 Afer_0731 f41f1f31844bf0853b2049e5f549cd6e 258 Pfam PF03099 Biotin/lipoate A/B protein ligase family 17 135 1.5E-6 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Afer_0731 f41f1f31844bf0853b2049e5f549cd6e 258 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 11 228 3.1E-26 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 Afer_0731 f41f1f31844bf0853b2049e5f549cd6e 258 SUPERFAMILY SSF55681 5 182 1.82E-33 T 14-10-2018 Afer_1383 63e98bb11f839f4d052f88c7087b07ff 368 Pfam PF00005 ABC transporter 37 179 1.5E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1383 63e98bb11f839f4d052f88c7087b07ff 368 SUPERFAMILY SSF50331 256 355 1.25E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Afer_1383 63e98bb11f839f4d052f88c7087b07ff 368 Pfam PF08402 TOBE domain 292 353 2.2E-5 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 Afer_1383 63e98bb11f839f4d052f88c7087b07ff 368 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1383 63e98bb11f839f4d052f88c7087b07ff 368 SUPERFAMILY SSF52540 22 262 1.77E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1383 63e98bb11f839f4d052f88c7087b07ff 368 Gene3D G3DSA:3.40.50.300 22 287 3.6E-81 T 14-10-2018 Afer_1383 63e98bb11f839f4d052f88c7087b07ff 368 SMART SM00382 46 229 2.4E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 Pfam PF00813 FliP family 34 224 3.8E-70 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 205 217 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 129 141 4.5E-8 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 29 38 4.5E-8 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 89 101 4.5E-8 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 4.5E-8 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 101 115 4.5E-8 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 178 199 2.7E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 31 50 2.7E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 202 227 2.7E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 70 89 2.7E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 50 70 2.7E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 157 177 2.7E-64 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 Afer_0155 389acbbc7e625e6347f4a4f2265aa31d 229 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 34 227 3.7E-70 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 Afer_0576 4e34cc9550306a63acb52814679d31dd 669 SUPERFAMILY SSF55464 55 260 1.1E-36 T 14-10-2018 Afer_0576 4e34cc9550306a63acb52814679d31dd 669 Pfam PF08751 TrwC relaxase 54 257 1.2E-36 T 14-10-2018 IPR014862 TrwC relaxase Afer_0629 c2c06e0e3af53f57bb507d5165173bf1 190 Pfam PF01765 Ribosome recycling factor 26 188 1.7E-50 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 Afer_0629 c2c06e0e3af53f57bb507d5165173bf1 190 Hamap MF_00040 Ribosome-recycling factor [frr]. 8 190 24.313 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Afer_0629 c2c06e0e3af53f57bb507d5165173bf1 190 TIGRFAM TIGR00496 frr: ribosome recycling factor 15 190 3.7E-57 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 Afer_0629 c2c06e0e3af53f57bb507d5165173bf1 190 SUPERFAMILY SSF55194 10 189 1.57E-57 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 Afer_0629 c2c06e0e3af53f57bb507d5165173bf1 190 Gene3D G3DSA:3.30.1360.40 36 110 3.7E-56 T 14-10-2018 Afer_0629 c2c06e0e3af53f57bb507d5165173bf1 190 Gene3D G3DSA:1.10.132.20 17 187 3.7E-56 T 14-10-2018 Afer_1320 0ae5bc318d1964f654d35a92d1772953 109 Pfam PF01527 Transposase 15 90 4.6E-11 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_1320 0ae5bc318d1964f654d35a92d1772953 109 Gene3D G3DSA:1.10.10.60 23 106 1.4E-9 T 14-10-2018 Afer_1320 0ae5bc318d1964f654d35a92d1772953 109 SUPERFAMILY SSF46689 18 105 8.24E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0679 e395eafd7cad02376b4d6e1cc10cd74c 335 PIRSF PIRSF017617 1 335 3.1E-94 T 14-10-2018 IPR023603 Threonine aldolase Afer_0679 e395eafd7cad02376b4d6e1cc10cd74c 335 Pfam PF01212 Beta-eliminating lyase 4 283 2.1E-67 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 Afer_0679 e395eafd7cad02376b4d6e1cc10cd74c 335 Gene3D G3DSA:3.40.640.10 1 245 4.1E-73 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0679 e395eafd7cad02376b4d6e1cc10cd74c 335 SUPERFAMILY SSF53383 3 333 2.02E-88 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0679 e395eafd7cad02376b4d6e1cc10cd74c 335 Gene3D G3DSA:3.90.1150.10 247 335 2.7E-12 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0487 d04d794edbf9d9b66ff93b2eab97c894 296 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 3 261 3.4E-100 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 Afer_0487 d04d794edbf9d9b66ff93b2eab97c894 296 SUPERFAMILY SSF53448 3 266 7.85E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0487 d04d794edbf9d9b66ff93b2eab97c894 296 Gene3D G3DSA:3.90.550.10 1 291 1.5E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0487 d04d794edbf9d9b66ff93b2eab97c894 296 Pfam PF00483 Nucleotidyl transferase 5 261 1.2E-28 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Afer_0994 7bc30009cd6472e761d445bbd6f65a94 349 SUPERFAMILY SSF53822 49 337 7.91E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Afer_0994 7bc30009cd6472e761d445bbd6f65a94 349 Pfam PF13407 Periplasmic binding protein domain 51 318 9.3E-45 T 14-10-2018 IPR025997 Periplasmic binding protein Afer_0994 7bc30009cd6472e761d445bbd6f65a94 349 Gene3D G3DSA:3.40.50.2300 59 323 2.9E-58 T 14-10-2018 Afer_0994 7bc30009cd6472e761d445bbd6f65a94 349 Gene3D G3DSA:3.40.50.2300 154 298 2.9E-58 T 14-10-2018 Afer_1417 84372bf639675ec8e4fdd177b3759b6c 650 TIGRFAM TIGR02243 TIGR02243: putative baseplate assembly protein 8 615 2.1E-135 T 14-10-2018 IPR011749 Conserved hypothetical protein CHP02243 Afer_1417 84372bf639675ec8e4fdd177b3759b6c 650 Pfam PF04865 Baseplate J-like protein 403 571 1.2E-8 T 14-10-2018 IPR006949 Baseplate protein J-like Afer_2015 9008209e377974388dc5064bf42c448f 92 Pfam PF01527 Transposase 2 75 2.9E-15 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_2015 9008209e377974388dc5064bf42c448f 92 SUPERFAMILY SSF46689 1 73 8.96E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1810 2e55f8b7491241548c57318b739bc15c 74 TIGRFAM TIGR00105 L31: ribosomal protein bL31 2 64 3.2E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1810 2e55f8b7491241548c57318b739bc15c 74 Gene3D G3DSA:2.30.170.50 1 69 1.2E-30 T 14-10-2018 Afer_1810 2e55f8b7491241548c57318b739bc15c 74 PRINTS PR01249 Ribosomal protein L31 signature 30 45 7.4E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1810 2e55f8b7491241548c57318b739bc15c 74 PRINTS PR01249 Ribosomal protein L31 signature 45 63 7.4E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1810 2e55f8b7491241548c57318b739bc15c 74 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.4E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1810 2e55f8b7491241548c57318b739bc15c 74 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 67 27.939 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1810 2e55f8b7491241548c57318b739bc15c 74 SUPERFAMILY SSF143800 2 64 2.0E-25 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1810 2e55f8b7491241548c57318b739bc15c 74 Pfam PF01197 Ribosomal protein L31 2 64 6.6E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 Gene3D G3DSA:3.40.50.720 5 234 7.2E-60 T 14-10-2018 Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 5.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 5.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 Pfam PF00106 short chain dehydrogenase 4 184 1.6E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.7E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 1.7E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.7E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.7E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.7E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.7E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1363 d4a629b270c6d1d5e1fdaf12262c9b64 250 SUPERFAMILY SSF51735 4 230 9.96E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1431 1cadd5eb82d06c6cc3e487ed466fb563 400 Pfam PF00107 Zinc-binding dehydrogenase 204 335 5.9E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Afer_1431 1cadd5eb82d06c6cc3e487ed466fb563 400 SUPERFAMILY SSF51735 170 328 4.3E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1431 1cadd5eb82d06c6cc3e487ed466fb563 400 Gene3D G3DSA:3.90.180.10 41 375 1.0E-61 T 14-10-2018 Afer_1431 1cadd5eb82d06c6cc3e487ed466fb563 400 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 46 163 1.5E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Afer_1431 1cadd5eb82d06c6cc3e487ed466fb563 400 SUPERFAMILY SSF50129 29 202 4.41E-23 T 14-10-2018 IPR011032 GroES-like superfamily Afer_1431 1cadd5eb82d06c6cc3e487ed466fb563 400 Gene3D G3DSA:3.40.50.720 182 321 1.0E-61 T 14-10-2018 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 SMART SM00917 378 520 2.9E-35 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 9 521 1.5E-188 T 14-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 16 32 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 Gene3D G3DSA:3.20.20.70 6 286 5.4E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 SUPERFAMILY SSF51569 6 298 1.83E-79 T 14-10-2018 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 SUPERFAMILY SSF110921 403 516 1.44E-22 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 Pfam PF00682 HMGL-like 9 261 1.5E-46 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 Gene3D G3DSA:1.10.238.260 289 393 4.7E-23 T 14-10-2018 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 Pfam PF08502 LeuA allosteric (dimerisation) domain 380 516 1.0E-22 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 Gene3D G3DSA:3.30.160.270 400 520 9.7E-7 T 14-10-2018 Afer_1538 38246b490191dc7ea3f6b7cde95d9549 530 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 208 221 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 Afer_1163 77aa4a1347eb4309a4e07c0f13365e65 70 Pfam PF00403 Heavy-metal-associated domain 6 65 5.8E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Afer_1163 77aa4a1347eb4309a4e07c0f13365e65 70 Gene3D G3DSA:3.30.70.100 5 65 6.2E-19 T 14-10-2018 Afer_1163 77aa4a1347eb4309a4e07c0f13365e65 70 SUPERFAMILY SSF55008 3 67 2.62E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Afer_1163 77aa4a1347eb4309a4e07c0f13365e65 70 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Afer_1031 d5b50875d17336abc343c72a280faa24 547 Gene3D G3DSA:3.90.226.10 285 547 9.6E-85 T 14-10-2018 Afer_1031 d5b50875d17336abc343c72a280faa24 547 Pfam PF01039 Carboxyl transferase domain 52 535 7.4E-118 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Afer_1031 d5b50875d17336abc343c72a280faa24 547 Gene3D G3DSA:3.90.226.10 4 282 5.7E-67 T 14-10-2018 Afer_1031 d5b50875d17336abc343c72a280faa24 547 SUPERFAMILY SSF52096 288 535 4.23E-74 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1031 d5b50875d17336abc343c72a280faa24 547 SUPERFAMILY SSF52096 25 281 1.03E-51 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 ProSitePatterns PS00801 Transketolase signature 1. 31 50 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 Pfam PF02779 Transketolase, pyrimidine binding domain 317 477 1.4E-32 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 5 621 38.647 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 SMART SM00861 318 482 4.2E-55 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 SUPERFAMILY SSF52518 3 380 4.4E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 SUPERFAMILY SSF52518 360 477 9.51E-5 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 SUPERFAMILY SSF52922 493 621 2.22E-25 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 Gene3D G3DSA:3.40.50.970 316 485 3.6E-58 T 14-10-2018 Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 8 620 6.1E-181 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 6 283 1.8E-98 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 Pfam PF02780 Transketolase, C-terminal domain 493 608 3.3E-26 T 14-10-2018 IPR033248 Transketolase, C-terminal domain Afer_0479 0a50ee5127d19bbd302b8c0067426385 635 Gene3D G3DSA:3.40.50.920 492 622 3.2E-29 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 Gene3D G3DSA:2.40.50.140 1 123 5.0E-63 T 14-10-2018 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 SUPERFAMILY SSF50249 2 123 8.22E-53 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 2 123 2.2E-67 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.1E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 40.351 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 Pfam PF00164 Ribosomal protein S12/S23 12 123 1.4E-43 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0393 1dd047c618b46384cb7ed591f0b43d7e 123 PIRSF PIRSF002133 1 123 1.1E-54 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0282 4df06fbf897f9211594ad98eed70b32c 301 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 87 219 4.1E-24 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Afer_0282 4df06fbf897f9211594ad98eed70b32c 301 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 89 282 5.4E-29 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Afer_0282 4df06fbf897f9211594ad98eed70b32c 301 SUPERFAMILY SSF109854 73 225 9.39E-39 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Afer_0282 4df06fbf897f9211594ad98eed70b32c 301 Gene3D G3DSA:1.20.120.450 70 225 1.3E-45 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Afer_1868 cb4a0261acbe1967e1025e4702183641 144 TIGRFAM TIGR00305 TIGR00305: putative toxin-antitoxin system toxin component, PIN family 7 122 1.8E-16 T 14-10-2018 IPR002850 PIN family, putative toxin-antitoxin system toxin component Afer_1868 cb4a0261acbe1967e1025e4702183641 144 SUPERFAMILY SSF88723 7 121 1.01E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily Afer_1868 cb4a0261acbe1967e1025e4702183641 144 Pfam PF13470 PIN domain 7 117 3.9E-17 T 14-10-2018 IPR002716 PIN domain Afer_1868 cb4a0261acbe1967e1025e4702183641 144 SMART SM00670 6 122 6.9E-8 T 14-10-2018 IPR002716 PIN domain Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 SUPERFAMILY SSF56053 1 82 7.67E-25 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 155 163 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 SUPERFAMILY SSF56053 83 177 5.22E-33 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 Pfam PF00347 Ribosomal protein L6 90 165 1.2E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 Pfam PF00347 Ribosomal protein L6 11 82 7.0E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 177 8.7E-71 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 PIRSF PIRSF002162 1 178 6.7E-42 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 PRINTS PR00059 Ribosomal protein L6 signature 71 96 5.5E-31 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 PRINTS PR00059 Ribosomal protein L6 signature 100 116 5.5E-31 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 PRINTS PR00059 Ribosomal protein L6 signature 142 163 5.5E-31 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 177 38.457 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 Gene3D G3DSA:3.90.930.12 1 82 1.7E-29 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0413 c7fa5a2d302503e01005c3f74ad59a48 179 Gene3D G3DSA:3.90.930.12 83 179 5.3E-37 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1628 9e0cae0bd1f06e5cb180a4ed79a39410 395 SUPERFAMILY SSF56801 62 377 4.84E-58 T 14-10-2018 Afer_1628 9e0cae0bd1f06e5cb180a4ed79a39410 395 Pfam PF00501 AMP-binding enzyme 67 281 9.7E-23 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_1628 9e0cae0bd1f06e5cb180a4ed79a39410 395 Gene3D G3DSA:3.40.50.12780 7 277 3.7E-34 T 14-10-2018 Afer_1628 9e0cae0bd1f06e5cb180a4ed79a39410 395 Pfam PF13193 AMP-binding enzyme C-terminal domain 292 365 3.9E-7 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_1628 9e0cae0bd1f06e5cb180a4ed79a39410 395 Gene3D G3DSA:3.30.300.30 278 379 3.9E-15 T 14-10-2018 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 Gene3D G3DSA:3.30.420.40 152 315 1.2E-128 T 14-10-2018 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 Pfam PF06723 MreB/Mbl protein 10 334 3.1E-147 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 SUPERFAMILY SSF53067 8 146 1.43E-38 T 14-10-2018 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 8 334 1.3E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 SUPERFAMILY SSF53067 147 327 5.18E-50 T 14-10-2018 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 Gene3D G3DSA:3.90.640.10 184 257 1.2E-128 T 14-10-2018 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 Gene3D G3DSA:3.30.420.40 12 325 1.2E-128 T 14-10-2018 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 298 324 3.3E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 130 149 3.3E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 185 205 3.3E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 47 65 3.3E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_0766 bf403d4f88979f113fdd28bb8ddfadfb 342 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 67 90 3.3E-58 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 Afer_0296 924ebe7e25ea38364c16000b643739d5 290 Gene3D G3DSA:3.30.110.70 62 147 2.0E-13 T 14-10-2018 Afer_0296 924ebe7e25ea38364c16000b643739d5 290 Gene3D G3DSA:3.30.110.70 178 269 9.5E-13 T 14-10-2018 Afer_0296 924ebe7e25ea38364c16000b643739d5 290 Pfam PF01906 Putative heavy-metal-binding 184 267 1.7E-11 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 Afer_0296 924ebe7e25ea38364c16000b643739d5 290 Pfam PF01906 Putative heavy-metal-binding 87 145 2.5E-11 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 Afer_0296 924ebe7e25ea38364c16000b643739d5 290 SUPERFAMILY SSF117782 182 267 2.09E-17 T 14-10-2018 IPR035439 UPF0145 domain superfamily Afer_0296 924ebe7e25ea38364c16000b643739d5 290 SUPERFAMILY SSF117782 62 145 1.05E-16 T 14-10-2018 IPR035439 UPF0145 domain superfamily Afer_1105 42468b03140cd28e78ba3e5277c4a2c8 106 SMART SM00883 7 94 4.1E-18 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_1105 42468b03140cd28e78ba3e5277c4a2c8 106 PRINTS PR00297 10kDa chaperonin signature 34 55 4.4E-6 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_1105 42468b03140cd28e78ba3e5277c4a2c8 106 PRINTS PR00297 10kDa chaperonin signature 60 72 4.4E-6 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_1105 42468b03140cd28e78ba3e5277c4a2c8 106 PRINTS PR00297 10kDa chaperonin signature 81 94 4.4E-6 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_1105 42468b03140cd28e78ba3e5277c4a2c8 106 PRINTS PR00297 10kDa chaperonin signature 8 23 4.4E-6 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_1105 42468b03140cd28e78ba3e5277c4a2c8 106 SUPERFAMILY SSF50129 8 94 5.3E-16 T 14-10-2018 IPR011032 GroES-like superfamily Afer_1105 42468b03140cd28e78ba3e5277c4a2c8 106 Pfam PF00166 Chaperonin 10 Kd subunit 8 93 1.8E-15 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_1105 42468b03140cd28e78ba3e5277c4a2c8 106 Gene3D G3DSA:2.30.33.40 4 95 4.2E-12 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Afer_1319 30233bc6593044ea41a2ded939534c56 292 SUPERFAMILY SSF53098 120 283 7.74E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1319 30233bc6593044ea41a2ded939534c56 292 Gene3D G3DSA:3.30.420.10 141 291 4.4E-7 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1319 30233bc6593044ea41a2ded939534c56 292 Pfam PF00665 Integrase core domain 126 239 7.7E-24 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_1319 30233bc6593044ea41a2ded939534c56 292 Pfam PF13276 HTH-like domain 50 101 3.6E-19 T 14-10-2018 IPR025948 HTH-like domain Afer_0852 d1b3814f0ebcfbe6c33e943c765def53 75 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 4 72 4.9E-19 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Afer_0852 d1b3814f0ebcfbe6c33e943c765def53 75 PRINTS PR01651 Protein-export SecG membrane protein signature 4 24 4.2E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Afer_0852 d1b3814f0ebcfbe6c33e943c765def53 75 PRINTS PR01651 Protein-export SecG membrane protein signature 55 75 4.2E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Afer_0852 d1b3814f0ebcfbe6c33e943c765def53 75 PRINTS PR01651 Protein-export SecG membrane protein signature 24 38 4.2E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Afer_0852 d1b3814f0ebcfbe6c33e943c765def53 75 Pfam PF03840 Preprotein translocase SecG subunit 5 73 2.2E-17 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 Gene3D G3DSA:1.10.287.610 103 154 1.1E-20 T 14-10-2018 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 9 20 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 PRINTS PR00395 Ribosomal protein S2 signature 90 107 7.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 PRINTS PR00395 Ribosomal protein S2 signature 178 189 7.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 PRINTS PR00395 Ribosomal protein S2 signature 40 49 7.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 PRINTS PR00395 Ribosomal protein S2 signature 161 178 7.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 PRINTS PR00395 Ribosomal protein S2 signature 9 27 7.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 PRINTS PR00395 Ribosomal protein S2 signature 199 213 7.9E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 SUPERFAMILY SSF52313 9 232 2.75E-88 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 5 228 39.652 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 Pfam PF00318 Ribosomal protein S2 12 227 6.2E-89 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 7 229 4.1E-95 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0626 c7b9d5134f1a20c6d5328fcc3a2976b3 237 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 161 185 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 Afer_1238 d7d68793591ab88b09a8d8c92251e25a 179 Pfam PF04472 Cell division protein SepF 85 156 2.6E-23 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 Afer_1238 d7d68793591ab88b09a8d8c92251e25a 179 Gene3D G3DSA:3.30.110.150 80 170 2.6E-24 T 14-10-2018 IPR038594 SepF-like superfamily Afer_1238 d7d68793591ab88b09a8d8c92251e25a 179 Hamap MF_01197 Cell division protein SepF [sepF]. 1 164 17.539 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 Afer_1805 3b531e81ec49a2125d74be39c3e41eed 424 Pfam PF00464 Serine hydroxymethyltransferase 4 391 8.2E-144 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Afer_1805 3b531e81ec49a2125d74be39c3e41eed 424 Gene3D G3DSA:3.90.1150.10 8 400 9.1E-161 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1805 3b531e81ec49a2125d74be39c3e41eed 424 PIRSF PIRSF000412 1 424 2.2E-155 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Afer_1805 3b531e81ec49a2125d74be39c3e41eed 424 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 421 49.48 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 Afer_1805 3b531e81ec49a2125d74be39c3e41eed 424 SUPERFAMILY SSF53383 3 421 4.64E-156 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1805 3b531e81ec49a2125d74be39c3e41eed 424 Gene3D G3DSA:3.40.640.10 33 292 9.1E-161 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1152 4eb0e6fb5c6e66a4f87631b11867f08b 360 SUPERFAMILY SSF54373 208 300 2.62E-12 T 14-10-2018 Afer_1152 4eb0e6fb5c6e66a4f87631b11867f08b 360 SUPERFAMILY SSF51905 1 356 6.73E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1152 4eb0e6fb5c6e66a4f87631b11867f08b 360 Gene3D G3DSA:3.50.50.60 1 339 7.3E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1152 4eb0e6fb5c6e66a4f87631b11867f08b 360 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 1 341 4.8E-89 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 Afer_1152 4eb0e6fb5c6e66a4f87631b11867f08b 360 Gene3D G3DSA:3.30.9.10 85 300 7.3E-74 T 14-10-2018 Afer_1152 4eb0e6fb5c6e66a4f87631b11867f08b 360 Pfam PF01266 FAD dependent oxidoreductase 1 337 8.2E-51 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Afer_1590 611a723c942a8dd40cd8f365d0ce6a85 430 SUPERFAMILY SSF53790 5 251 3.34E-9 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Afer_1590 611a723c942a8dd40cd8f365d0ce6a85 430 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 244 322 2.4E-22 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core Afer_1590 611a723c942a8dd40cd8f365d0ce6a85 430 Gene3D G3DSA:1.10.287.1080 222 346 9.5E-39 T 14-10-2018 Afer_1590 611a723c942a8dd40cd8f365d0ce6a85 430 SUPERFAMILY SSF101386 224 324 2.45E-20 T 14-10-2018 Afer_1199 fdfeb462554c67bacad14d8530d7c1c7 151 Gene3D G3DSA:1.10.10.10 1 142 3.8E-44 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1199 fdfeb462554c67bacad14d8530d7c1c7 151 Pfam PF02082 Transcriptional regulator 2 83 3.1E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Afer_1199 fdfeb462554c67bacad14d8530d7c1c7 151 SUPERFAMILY SSF46785 2 135 9.49E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1199 fdfeb462554c67bacad14d8530d7c1c7 151 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Afer_1199 fdfeb462554c67bacad14d8530d7c1c7 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 133 2.6E-36 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Afer_1227 54ac221d8b4ae7bd44e9b1d4609b7140 123 SUPERFAMILY SSF54593 7 121 3.49E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Afer_1227 54ac221d8b4ae7bd44e9b1d4609b7140 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 118 1.1E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain Afer_1227 54ac221d8b4ae7bd44e9b1d4609b7140 123 Gene3D G3DSA:3.10.180.10 9 122 3.7E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Afer_0803 fdbe6c0200b0758b6bcaa6135bd4693d 403 SUPERFAMILY SSF63433 6 108 1.15E-8 T 14-10-2018 IPR036462 Fumarylacetoacetase, N-terminal domain superfamily GO:0004334|GO:0009072 KEGG: 00350+3.7.1.2|KEGG: 00643+3.7.1.2|Reactome: R-HSA-71182 Afer_0803 fdbe6c0200b0758b6bcaa6135bd4693d 403 SUPERFAMILY SSF56529 110 397 3.14E-75 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Afer_0803 fdbe6c0200b0758b6bcaa6135bd4693d 403 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 114 395 1.0E-49 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Afer_0803 fdbe6c0200b0758b6bcaa6135bd4693d 403 Gene3D G3DSA:3.90.850.10 106 400 5.8E-90 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Afer_1548 c7740b70cbc18f64fb348aab1c1fb13d 567 Pfam PF00920 Dehydratase family 38 556 2.1E-210 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Afer_1548 c7740b70cbc18f64fb348aab1c1fb13d 567 SUPERFAMILY SSF143975 4 380 3.4E-135 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Afer_1548 c7740b70cbc18f64fb348aab1c1fb13d 567 Gene3D G3DSA:3.50.30.80 381 530 1.1E-53 T 14-10-2018 Afer_1548 c7740b70cbc18f64fb348aab1c1fb13d 567 SUPERFAMILY SSF52016 381 559 1.49E-56 T 14-10-2018 Afer_1548 c7740b70cbc18f64fb348aab1c1fb13d 567 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 8 559 46.153 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Afer_1548 c7740b70cbc18f64fb348aab1c1fb13d 567 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 126 136 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Afer_1548 c7740b70cbc18f64fb348aab1c1fb13d 567 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 467 478 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Afer_1548 c7740b70cbc18f64fb348aab1c1fb13d 567 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 21 559 2.9E-224 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 Pfam PF03099 Biotin/lipoate A/B protein ligase family 59 160 3.0E-10 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 SMART SM00729 297 503 3.8E-10 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 Hamap MF_00206 Lipoyl synthase [lipA]. 250 535 121.966 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 Pfam PF04055 Radical SAM superfamily 305 459 7.6E-10 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 69 84 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 TIGRFAM TIGR00510 lipA: lipoyl synthase 249 522 1.5E-100 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 Gene3D G3DSA:3.20.20.70 298 502 1.6E-15 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 SUPERFAMILY SSF55681 4 206 7.54E-58 T 14-10-2018 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 73 126 1.0E-6 T 14-10-2018 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 Gene3D G3DSA:3.30.930.10 1 204 2.0E-67 T 14-10-2018 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 33 202 1.6E-43 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 SUPERFAMILY SSF102114 267 522 2.35E-55 T 14-10-2018 Afer_0719 bb83cd82cc601cfd144d9ea48279e831 535 Hamap MF_00013 Octanoyltransferase [lipB]. 4 207 31.665 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 Afer_1404 bfa8a10ff6e0edb6988366d3e483998c 85 SUPERFAMILY SSF64307 9 81 1.57E-15 T 14-10-2018 IPR036868 TusA-like domain superfamily Afer_1404 bfa8a10ff6e0edb6988366d3e483998c 85 Gene3D G3DSA:3.30.110.40 7 83 4.3E-21 T 14-10-2018 IPR036868 TusA-like domain superfamily Afer_1404 bfa8a10ff6e0edb6988366d3e483998c 85 Pfam PF01206 Sulfurtransferase TusA 14 81 2.2E-16 T 14-10-2018 IPR001455 TusA-like domain Afer_0397 4960d33315a99d509561adb94ba1517b 108 SMART SM01403 10 104 2.7E-51 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Afer_0397 4960d33315a99d509561adb94ba1517b 108 PRINTS PR00971 Ribosomal protein S10 family signature 43 58 1.2E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0397 4960d33315a99d509561adb94ba1517b 108 PRINTS PR00971 Ribosomal protein S10 family signature 8 21 1.2E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0397 4960d33315a99d509561adb94ba1517b 108 PRINTS PR00971 Ribosomal protein S10 family signature 64 78 1.2E-19 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0397 4960d33315a99d509561adb94ba1517b 108 SUPERFAMILY SSF54999 8 105 1.96E-35 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Afer_0397 4960d33315a99d509561adb94ba1517b 108 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 6 105 25.77 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0397 4960d33315a99d509561adb94ba1517b 108 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 7 104 1.9E-42 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0397 4960d33315a99d509561adb94ba1517b 108 Gene3D G3DSA:3.30.70.600 5 106 3.5E-35 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily Afer_0397 4960d33315a99d509561adb94ba1517b 108 Pfam PF00338 Ribosomal protein S10p/S20e 10 104 8.5E-33 T 14-10-2018 IPR027486 Ribosomal protein S10 domain Afer_1789 4a9f5921b456c01578c02934cae23b4a 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 5.8E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1789 4a9f5921b456c01578c02934cae23b4a 194 SUPERFAMILY SSF46689 9 81 3.23E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1789 4a9f5921b456c01578c02934cae23b4a 194 Gene3D G3DSA:1.10.357.10 4 189 4.0E-16 T 14-10-2018 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 Pfam PF00672 HAMP domain 229 279 3.6E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 SUPERFAMILY SSF47384 266 348 4.32E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 SMART SM00304 229 282 3.6E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 3.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 3.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 484 3.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 PRINTS PR00344 Bacterial sensor protein C-terminal signature 490 503 3.5E-14 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 SMART SM00387 391 506 2.5E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0702 f3c9527f51c938136260596588d2fbe9 523 Pfam PF00512 His Kinase A (phospho-acceptor) domain 285 348 5.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 Gene3D G3DSA:3.30.565.10 354 511 1.0E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0702 f3c9527f51c938136260596588d2fbe9 523 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 504 9.5E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_0702 f3c9527f51c938136260596588d2fbe9 523 Gene3D G3DSA:1.10.287.130 233 348 2.5E-26 T 14-10-2018 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 SUPERFAMILY SSF55874 338 504 4.58E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0702 f3c9527f51c938136260596588d2fbe9 523 SMART SM00388 283 348 5.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_0702 f3c9527f51c938136260596588d2fbe9 523 SUPERFAMILY SSF158472 229 279 1.05E-6 T 14-10-2018 Afer_1124 3d4ae35d978b376bf5cad0edc459d426 129 Gene3D G3DSA:2.40.50.100 1 128 8.7E-49 T 14-10-2018 Afer_1124 3d4ae35d978b376bf5cad0edc459d426 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Afer_1124 3d4ae35d978b376bf5cad0edc459d426 129 SUPERFAMILY SSF51230 3 127 1.06E-40 T 14-10-2018 IPR011053 Single hybrid motif Afer_1124 3d4ae35d978b376bf5cad0edc459d426 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 127 36.735 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Afer_1124 3d4ae35d978b376bf5cad0edc459d426 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 1.4E-48 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Afer_1124 3d4ae35d978b376bf5cad0edc459d426 129 Pfam PF01597 Glycine cleavage H-protein 7 127 7.0E-43 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Afer_1698 c8a0cb0f96161413b4fd742f3c0ea2f1 309 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 302 29.239 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 Afer_1698 c8a0cb0f96161413b4fd742f3c0ea2f1 309 Gene3D G3DSA:3.20.20.70 13 293 9.8E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1698 c8a0cb0f96161413b4fd742f3c0ea2f1 309 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 240 260 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 Afer_1698 c8a0cb0f96161413b4fd742f3c0ea2f1 309 Gene3D G3DSA:2.30.26.10 55 216 9.8E-76 T 14-10-2018 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 Afer_1698 c8a0cb0f96161413b4fd742f3c0ea2f1 309 Pfam PF01180 Dihydroorotate dehydrogenase 12 287 7.8E-53 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Afer_1698 c8a0cb0f96161413b4fd742f3c0ea2f1 309 PIRSF PIRSF000164 3 299 3.2E-60 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Afer_1698 c8a0cb0f96161413b4fd742f3c0ea2f1 309 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 9 294 6.0E-70 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 Afer_1698 c8a0cb0f96161413b4fd742f3c0ea2f1 309 SUPERFAMILY SSF51395 3 299 7.02E-64 T 14-10-2018 Afer_0984 b2b7572d617262b5583b6bca48c5a3c9 226 Pfam PF08798 CRISPR associated protein 1 220 1.0E-55 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 Afer_0984 b2b7572d617262b5583b6bca48c5a3c9 226 SUPERFAMILY SSF117987 98 220 5.36E-26 T 14-10-2018 Afer_0984 b2b7572d617262b5583b6bca48c5a3c9 226 Gene3D G3DSA:3.30.70.1210 98 221 1.5E-29 T 14-10-2018 Afer_0984 b2b7572d617262b5583b6bca48c5a3c9 226 SMART SM01101 1 221 1.2E-41 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 Afer_0984 b2b7572d617262b5583b6bca48c5a3c9 226 TIGRFAM TIGR01907 casE_Cse3: CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI 1 220 2.7E-17 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 Afer_0984 b2b7572d617262b5583b6bca48c5a3c9 226 Gene3D G3DSA:3.30.70.1200 1 94 1.0E-17 T 14-10-2018 Afer_0984 b2b7572d617262b5583b6bca48c5a3c9 226 SUPERFAMILY SSF117987 1 81 1.12E-14 T 14-10-2018 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 SUPERFAMILY SSF81442 27 535 3.01E-177 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 40 483 1.0E-140 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 30 55 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 441 462 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 77 100 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 391 410 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 180 198 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 209 228 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 148 160 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 260 281 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 363 381 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 306 321 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 105 129 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 PRINTS PR01165 Cytochrome c oxidase subunit I signature 328 349 2.2E-100 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 Gene3D G3DSA:1.20.210.10 21 542 1.1E-202 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 262 316 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1823 b1d56ee96538267d383dd5208620a6d1 563 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 31 533 2.2E-208 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Afer_1693 3cbd3b633a208163778cb626d1661fd8 400 SUPERFAMILY SSF102645 180 394 4.71E-59 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Afer_1693 3cbd3b633a208163778cb626d1661fd8 400 Pfam PF02441 Flavoprotein 4 165 1.3E-32 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 Afer_1693 3cbd3b633a208163778cb626d1661fd8 400 SUPERFAMILY SSF52507 3 166 4.32E-44 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Afer_1693 3cbd3b633a208163778cb626d1661fd8 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 388 2.8E-98 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 Afer_1693 3cbd3b633a208163778cb626d1661fd8 400 Gene3D G3DSA:3.40.50.1950 1 168 4.4E-40 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 Afer_1693 3cbd3b633a208163778cb626d1661fd8 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 181 365 8.0E-58 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Afer_1693 3cbd3b633a208163778cb626d1661fd8 400 Gene3D G3DSA:3.40.50.10300 177 398 1.9E-64 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 Afer_1955 644a15ad18b48a7ee50a2f587c13b441 292 Gene3D G3DSA:3.30.200.20 1 90 3.6E-20 T 14-10-2018 Afer_1955 644a15ad18b48a7ee50a2f587c13b441 292 Pfam PF01259 SAICAR synthetase 8 242 5.9E-67 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_1955 644a15ad18b48a7ee50a2f587c13b441 292 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 3 274 20.402 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_1955 644a15ad18b48a7ee50a2f587c13b441 292 SUPERFAMILY SSF56104 5 277 5.56E-71 T 14-10-2018 Afer_1955 644a15ad18b48a7ee50a2f587c13b441 292 Gene3D G3DSA:3.30.470.20 91 226 8.0E-39 T 14-10-2018 Afer_1955 644a15ad18b48a7ee50a2f587c13b441 292 ProSitePatterns PS01058 SAICAR synthetase signature 2. 190 198 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_1311 5d4eba565f2f20e45581932fb5ae123d 468 Pfam PF02687 FtsX-like permease family 329 459 1.9E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 Afer_0580 f0d4e9a4a7b10794f89d14c6c7893300 329 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 38 323 1.6E-14 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Afer_0580 f0d4e9a4a7b10794f89d14c6c7893300 329 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 20 313 2.8E-26 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Afer_0241 cd6f433922bf7e5fb28b49f84f26ae9c 217 SMART SM00862 140 214 7.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_0241 cd6f433922bf7e5fb28b49f84f26ae9c 217 SUPERFAMILY SSF46894 119 214 3.12E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_0241 cd6f433922bf7e5fb28b49f84f26ae9c 217 Pfam PF00486 Transcriptional regulatory protein, C terminal 141 214 1.2E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_0241 cd6f433922bf7e5fb28b49f84f26ae9c 217 Gene3D G3DSA:1.10.10.10 111 217 5.1E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Gene3D G3DSA:2.40.30.10 279 372 3.8E-7 T 14-10-2018 Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Gene3D G3DSA:3.30.230.10 457 656 2.9E-69 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Gene3D G3DSA:3.40.50.300 6 278 1.2E-44 T 14-10-2018 Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 SMART SM00838 573 660 1.1E-17 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Pfam PF00009 Elongation factor Tu GTP binding domain 11 275 2.7E-22 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 SMART SM00382 10 190 4.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 SUPERFAMILY SSF54211 455 571 2.4E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 SMART SM00889 453 571 9.4E-57 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Pfam PF03764 Elongation factor G, domain IV 452 570 8.6E-37 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Gene3D G3DSA:3.30.70.870 378 456 4.0E-14 T 14-10-2018 Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 SUPERFAMILY SSF54980 378 452 5.04E-11 T 14-10-2018 IPR035647 EF-G domain III/V-like Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 SUPERFAMILY SSF52540 10 275 1.14E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 SUPERFAMILY SSF50447 260 358 3.14E-10 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Pfam PF00679 Elongation factor G C-terminus 574 657 1.7E-19 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Gene3D G3DSA:3.30.70.240 577 647 2.9E-69 T 14-10-2018 Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 SUPERFAMILY SSF54980 573 661 1.29E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like Afer_1226 98a30d4d5269c63d53a93dc46556dcbc 666 Pfam PF14492 Elongation Factor G, domain II 378 449 3.9E-15 T 14-10-2018 Afer_0351 56cc594d1c65788eb22aa0d435fcf351 288 Gene3D G3DSA:3.20.20.140 1 288 3.2E-53 T 14-10-2018 Afer_0351 56cc594d1c65788eb22aa0d435fcf351 288 SUPERFAMILY SSF89550 24 280 1.83E-31 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Afer_1290 bf3259a63b2e08673bf28036a89d1834 363 Pfam PF04055 Radical SAM superfamily 17 183 1.1E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_1290 bf3259a63b2e08673bf28036a89d1834 363 Gene3D G3DSA:3.80.30.20 3 298 5.5E-78 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe Afer_1290 bf3259a63b2e08673bf28036a89d1834 363 SUPERFAMILY SSF102114 12 359 2.88E-89 T 14-10-2018 Afer_1290 bf3259a63b2e08673bf28036a89d1834 363 SMART SM00729 12 226 3.2E-41 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_1080 7624660b6531107906d9ec37df0783b0 886 Pfam PF00476 DNA polymerase family A 511 880 1.5E-126 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 SUPERFAMILY SSF88723 12 183 3.92E-47 T 14-10-2018 IPR029060 PIN-like domain superfamily Afer_1080 7624660b6531107906d9ec37df0783b0 886 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 15 183 1.2E-49 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 Afer_1080 7624660b6531107906d9ec37df0783b0 886 Gene3D G3DSA:3.30.420.10 328 500 1.9E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1080 7624660b6531107906d9ec37df0783b0 886 SUPERFAMILY SSF53098 329 500 8.65E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 802 818 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 635 650 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 612 634 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 687 700 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 770 781 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 657 680 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 830 843 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 748 759 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 PRINTS PR00868 DNA-polymerase family A (pol I) signature 711 736 1.1E-64 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 SMART SM00482 643 847 2.8E-81 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 Gene3D G3DSA:3.30.70.370 620 879 1.6E-96 T 14-10-2018 Afer_1080 7624660b6531107906d9ec37df0783b0 886 TIGRFAM TIGR00593 pola: DNA polymerase I 15 883 2.5E-242 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1080 7624660b6531107906d9ec37df0783b0 886 Gene3D G3DSA:1.10.150.20 187 259 7.5E-83 T 14-10-2018 Afer_1080 7624660b6531107906d9ec37df0783b0 886 Gene3D G3DSA:3.40.50.1010 15 275 7.5E-83 T 14-10-2018 Afer_1080 7624660b6531107906d9ec37df0783b0 886 SMART SM00475 11 274 4.0E-115 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 Afer_1080 7624660b6531107906d9ec37df0783b0 886 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 184 277 1.6E-22 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 Afer_1080 7624660b6531107906d9ec37df0783b0 886 SMART SM00279 186 221 1.4E-10 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 Afer_1080 7624660b6531107906d9ec37df0783b0 886 SUPERFAMILY SSF47807 184 286 1.64E-23 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily Afer_1080 7624660b6531107906d9ec37df0783b0 886 SUPERFAMILY SSF56672 480 883 2.89E-135 T 14-10-2018 Afer_1080 7624660b6531107906d9ec37df0783b0 886 Gene3D G3DSA:1.10.150.20 666 809 1.6E-96 T 14-10-2018 Afer_1080 7624660b6531107906d9ec37df0783b0 886 Gene3D G3DSA:1.20.1060.10 502 615 1.1E-32 T 14-10-2018 Afer_0199 ef27312fcd007d5e7d7d13d3a3fc5d69 150 SUPERFAMILY SSF46785 13 142 1.07E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0199 ef27312fcd007d5e7d7d13d3a3fc5d69 150 Pfam PF01475 Ferric uptake regulator family 21 130 1.5E-24 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Afer_0199 ef27312fcd007d5e7d7d13d3a3fc5d69 150 Gene3D G3DSA:3.30.1490.190 94 150 4.5E-12 T 14-10-2018 Afer_0199 ef27312fcd007d5e7d7d13d3a3fc5d69 150 Gene3D G3DSA:1.10.10.10 10 93 1.5E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1362 0f700556e31105809c38501e6fe05cd4 488 Gene3D G3DSA:3.30.70.2740 339 420 1.4E-7 T 14-10-2018 Afer_1362 0f700556e31105809c38501e6fe05cd4 488 SUPERFAMILY SSF56176 15 220 1.54E-57 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_1362 0f700556e31105809c38501e6fe05cd4 488 Pfam PF02913 FAD linked oxidases, C-terminal domain 220 460 7.4E-63 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Afer_1362 0f700556e31105809c38501e6fe05cd4 488 Gene3D G3DSA:1.10.45.10 421 461 2.3E-7 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Afer_1362 0f700556e31105809c38501e6fe05cd4 488 Pfam PF01565 FAD binding domain 45 182 2.4E-35 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Afer_1362 0f700556e31105809c38501e6fe05cd4 488 Gene3D G3DSA:3.30.465.40 8 240 2.1E-55 T 14-10-2018 Afer_1362 0f700556e31105809c38501e6fe05cd4 488 SUPERFAMILY SSF55103 223 466 9.65E-63 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Afer_1295 6ede8ea8db0b90368ada99665733eab8 89 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 82 2.7E-23 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1295 6ede8ea8db0b90368ada99665733eab8 89 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 82 17.27 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1295 6ede8ea8db0b90368ada99665733eab8 89 Pfam PF01649 Ribosomal protein S20 2 81 1.9E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1295 6ede8ea8db0b90368ada99665733eab8 89 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 21 79 3.0E-10 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1295 6ede8ea8db0b90368ada99665733eab8 89 Gene3D G3DSA:1.20.58.110 1 83 1.5E-26 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1295 6ede8ea8db0b90368ada99665733eab8 89 SUPERFAMILY SSF46992 3 82 1.44E-24 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1017 8b0a976c426693a3f8af24fa4a941bb4 163 Pfam PF04138 GtrA-like protein 25 130 1.7E-9 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Afer_0428 965d8ce346c199189379b95237fb3847 294 Gene3D G3DSA:3.30.70.580 3 113 7.2E-18 T 14-10-2018 Afer_0428 965d8ce346c199189379b95237fb3847 294 Gene3D G3DSA:3.30.70.660 114 256 5.3E-16 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 Afer_0428 965d8ce346c199189379b95237fb3847 294 Pfam PF01416 tRNA pseudouridine synthase 156 252 1.5E-7 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_0428 965d8ce346c199189379b95237fb3847 294 SUPERFAMILY SSF55120 7 258 4.17E-41 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 Afer_1028 8b1b9e8b85ddcffc0ce0944e17b77b52 200 Gene3D G3DSA:1.10.357.10 59 198 1.2E-36 T 14-10-2018 Afer_1028 8b1b9e8b85ddcffc0ce0944e17b77b52 200 SUPERFAMILY SSF48498 82 196 1.04E-21 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Afer_1028 8b1b9e8b85ddcffc0ce0944e17b77b52 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1028 8b1b9e8b85ddcffc0ce0944e17b77b52 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1028 8b1b9e8b85ddcffc0ce0944e17b77b52 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 63 5.7E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1028 8b1b9e8b85ddcffc0ce0944e17b77b52 200 Gene3D G3DSA:1.10.10.60 1 58 5.8E-19 T 14-10-2018 Afer_1028 8b1b9e8b85ddcffc0ce0944e17b77b52 200 SUPERFAMILY SSF46689 4 87 8.48E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1936 73e6eb4eb9f6d463b36c429fbc98aeba 199 Gene3D G3DSA:3.40.50.150 8 199 1.4E-37 T 14-10-2018 Afer_1936 73e6eb4eb9f6d463b36c429fbc98aeba 199 SUPERFAMILY SSF53335 7 183 1.62E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1936 73e6eb4eb9f6d463b36c429fbc98aeba 199 Pfam PF13649 Methyltransferase domain 41 132 1.2E-11 T 14-10-2018 Afer_0123 e31fba63aa69294ce39e54720b30467c 83 SUPERFAMILY SSF159133 1 82 7.59E-26 T 14-10-2018 IPR036677 EutN/Ccml superfamily Afer_0123 e31fba63aa69294ce39e54720b30467c 83 TIGRFAM TIGR02704 carboxysome_B: carboxysome peptide B 1 80 1.1E-28 T 14-10-2018 IPR014077 Carboxysome peptide B Afer_0123 e31fba63aa69294ce39e54720b30467c 83 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 10 82 1.0E-23 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Afer_0123 e31fba63aa69294ce39e54720b30467c 83 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 77 1.8E-22 T 14-10-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml Afer_0123 e31fba63aa69294ce39e54720b30467c 83 Gene3D G3DSA:2.40.50.220 1 82 2.4E-30 T 14-10-2018 IPR036677 EutN/Ccml superfamily Afer_0299 5abcd24f9243393283213859a11c7958 271 Pfam PF06114 IrrE N-terminal-like domain 146 203 1.9E-7 T 14-10-2018 IPR010359 IrrE N-terminal-like domain Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 45 614 3.3E-173 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 SMART SM00863 151 201 7.9E-17 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 SUPERFAMILY SSF55681 225 510 1.07E-87 T 14-10-2018 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 Gene3D G3DSA:3.40.50.800 517 621 4.4E-15 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 SUPERFAMILY SSF55186 38 222 2.49E-44 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 Gene3D G3DSA:3.30.54.20 105 169 2.2E-49 T 14-10-2018 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 307 512 1.1E-36 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 151 200 3.7E-11 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 Pfam PF03129 Anticodon binding domain 526 613 1.1E-11 T 14-10-2018 IPR004154 Anticodon-binding Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 39 618 30.409 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 Gene3D G3DSA:3.30.980.10 42 204 2.2E-49 T 14-10-2018 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 Gene3D G3DSA:3.30.930.10 208 516 1.5E-110 T 14-10-2018 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 PRINTS PR01047 Threonyl-tRNA synthetase signature 313 341 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 PRINTS PR01047 Threonyl-tRNA synthetase signature 448 476 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 PRINTS PR01047 Threonyl-tRNA synthetase signature 518 530 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 PRINTS PR01047 Threonyl-tRNA synthetase signature 491 504 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 PRINTS PR01047 Threonyl-tRNA synthetase signature 346 369 3.3E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 Afer_1229 78c3beb134f16aacb126a6e34b6570ad 623 SUPERFAMILY SSF52954 515 615 2.72E-15 T 14-10-2018 Afer_0587 a7712b2a6a5dbf7d3bdd4f0d4e0c37dc 265 SUPERFAMILY SSF52096 11 246 4.51E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0587 a7712b2a6a5dbf7d3bdd4f0d4e0c37dc 265 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Afer_0587 a7712b2a6a5dbf7d3bdd4f0d4e0c37dc 265 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 246 4.4E-40 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_0587 a7712b2a6a5dbf7d3bdd4f0d4e0c37dc 265 Gene3D G3DSA:3.90.226.10 3 197 2.0E-55 T 14-10-2018 Afer_0587 a7712b2a6a5dbf7d3bdd4f0d4e0c37dc 265 Gene3D G3DSA:1.10.12.10 198 245 1.6E-6 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Afer_0267 debb35379d6df40ffcab61ba03c2cdeb 220 Pfam PF08241 Methyltransferase domain 51 151 1.3E-12 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Afer_0267 debb35379d6df40ffcab61ba03c2cdeb 220 SUPERFAMILY SSF53335 24 218 1.2E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0267 debb35379d6df40ffcab61ba03c2cdeb 220 Gene3D G3DSA:3.40.50.150 15 210 6.9E-23 T 14-10-2018 Afer_1581 793dbfdb869f7ff9c9aa04c43f1e13a8 186 SUPERFAMILY SSF88659 116 177 5.67E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_1581 793dbfdb869f7ff9c9aa04c43f1e13a8 186 SUPERFAMILY SSF88946 3 107 1.71E-22 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1581 793dbfdb869f7ff9c9aa04c43f1e13a8 186 Pfam PF08281 Sigma-70, region 4 123 174 2.2E-15 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Afer_1581 793dbfdb869f7ff9c9aa04c43f1e13a8 186 Gene3D G3DSA:1.10.10.10 89 180 2.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1581 793dbfdb869f7ff9c9aa04c43f1e13a8 186 Pfam PF04542 Sigma-70 region 2 28 92 1.3E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1581 793dbfdb869f7ff9c9aa04c43f1e13a8 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 178 7.7E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_1581 793dbfdb869f7ff9c9aa04c43f1e13a8 186 Gene3D G3DSA:1.10.1740.10 10 88 5.4E-27 T 14-10-2018 Afer_1134 8847709438931318da4d21759f1eadfb 200 SUPERFAMILY SSF55811 15 177 1.31E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Afer_1134 8847709438931318da4d21759f1eadfb 200 Pfam PF00293 NUDIX domain 40 152 1.5E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Afer_1134 8847709438931318da4d21759f1eadfb 200 Gene3D G3DSA:3.90.79.10 2 194 1.3E-43 T 14-10-2018 Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 Gene3D G3DSA:3.20.20.140 3 283 1.2E-62 T 14-10-2018 Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 SUPERFAMILY SSF89550 14 102 3.01E-18 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 Pfam PF02811 PHP domain 15 180 2.3E-22 T 14-10-2018 IPR004013 PHP domain GO:0003824 Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 306 729 4.9E-137 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 14 1001 3.1E-179 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 SMART SM00481 14 81 7.0E-25 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 13 1053 12.034 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 Gene3D G3DSA:2.40.50.140 952 1044 3.0E-5 T 14-10-2018 Afer_1611 9aea9eab5536fa6b027c4bfeb9d3cf8e 1053 Pfam PF14579 Helix-hairpin-helix motif 803 884 4.9E-16 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 SUPERFAMILY SSF56784 409 702 2.48E-41 T 14-10-2018 IPR036412 HAD-like superfamily Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 147 704 2.4E-131 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 Gene3D G3DSA:3.40.50.1000 391 641 5.1E-55 T 14-10-2018 IPR023214 HAD superfamily Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 Pfam PF00403 Heavy-metal-associated domain 17 76 5.1E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 602 621 5.6E-13 T 14-10-2018 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 625 637 5.6E-13 T 14-10-2018 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 411 425 5.6E-13 T 14-10-2018 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 549 559 5.6E-13 T 14-10-2018 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 Gene3D G3DSA:3.40.1110.10 421 534 5.1E-55 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 Gene3D G3DSA:3.30.70.100 12 82 1.1E-19 T 14-10-2018 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 SUPERFAMILY SSF81653 216 293 2.35E-11 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 ProSitePatterns PS01047 Heavy-metal-associated domain. 19 47 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 SUPERFAMILY SSF81665 179 679 1.09E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 SUPERFAMILY SSF55008 11 79 1.7E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 Pfam PF00122 E1-E2 ATPase 212 390 9.4E-35 T 14-10-2018 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 Pfam PF00702 haloacid dehalogenase-like hydrolase 407 615 1.8E-25 T 14-10-2018 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 Gene3D G3DSA:2.70.150.20 204 316 2.8E-16 T 14-10-2018 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 183 423 3.7E-23 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_1164 86ea00bf6ca4020ace7ca4cf12ef8f69 719 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 515 692 1.7E-32 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 Afer_0682 a5d7b82fb3c35cd42459030ac4a6bc37 118 Pfam PF11239 Protein of unknown function (DUF3040) 1 79 5.2E-23 T 14-10-2018 IPR021401 Protein of unknown function DUF3040 Afer_0363 96a5fbd914be1ebc485cac5ca7258e2c 152 Gene3D G3DSA:1.20.58.1610 9 127 3.9E-37 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0363 96a5fbd914be1ebc485cac5ca7258e2c 152 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 10 127 17.294 T 14-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 Afer_0363 96a5fbd914be1ebc485cac5ca7258e2c 152 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 32 126 3.9E-31 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0507 95ead1eba8124e666136f597b7cbc070 291 Pfam PF02653 Branched-chain amino acid transport system / permease component 10 276 1.0E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Afer_0361 5334d1130eaadc1492f944651bfd14f3 386 Gene3D G3DSA:3.40.50.2000 189 364 1.3E-83 T 14-10-2018 Afer_0361 5334d1130eaadc1492f944651bfd14f3 386 Pfam PF00534 Glycosyl transferases group 1 205 342 3.8E-20 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_0361 5334d1130eaadc1492f944651bfd14f3 386 Pfam PF13439 Glycosyltransferase Family 4 53 194 7.6E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Afer_0361 5334d1130eaadc1492f944651bfd14f3 386 SUPERFAMILY SSF53756 45 372 2.98E-55 T 14-10-2018 Afer_0361 5334d1130eaadc1492f944651bfd14f3 386 Gene3D G3DSA:3.40.50.2000 45 370 1.3E-83 T 14-10-2018 Afer_1533 f5ee7dc8d4d3e56288ffc88420173627 202 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 182 8.4E-56 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Afer_1533 f5ee7dc8d4d3e56288ffc88420173627 202 Gene3D G3DSA:3.20.19.10 1 170 9.1E-59 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 Afer_1533 f5ee7dc8d4d3e56288ffc88420173627 202 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 193 37.256 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 Afer_1533 f5ee7dc8d4d3e56288ffc88420173627 202 Pfam PF00694 Aconitase C-terminal domain 4 116 2.7E-25 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 Afer_1533 f5ee7dc8d4d3e56288ffc88420173627 202 SUPERFAMILY SSF52016 2 192 2.16E-46 T 14-10-2018 Afer_0483 7328c321769ec3fb62d3f8a96ed8360c 187 Gene3D G3DSA:3.40.50.880 2 183 7.1E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0483 7328c321769ec3fb62d3f8a96ed8360c 187 Pfam PF01965 DJ-1/PfpI family 3 177 8.6E-45 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 Afer_0483 7328c321769ec3fb62d3f8a96ed8360c 187 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 180 2.3E-50 T 14-10-2018 IPR006286 Deglycase PfpI Afer_0483 7328c321769ec3fb62d3f8a96ed8360c 187 SUPERFAMILY SSF52317 2 181 3.67E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0376 1a45836ab18959d6a6d2729f789f6925 523 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 23 457 4.3E-112 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Afer_0376 1a45836ab18959d6a6d2729f789f6925 523 Pfam PF00361 Proton-conducting membrane transporter 142 437 1.4E-64 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0376 1a45836ab18959d6a6d2729f789f6925 523 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 19 514 16.691 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 Afer_1182 06afc9cce08c801400b2032c8683c375 262 SUPERFAMILY SSF56529 20 261 8.55E-50 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Afer_1182 06afc9cce08c801400b2032c8683c375 262 Gene3D G3DSA:3.90.850.10 6 260 2.5E-60 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Afer_0235 1a6f1d8e7d01d6da3599da478a9460cb 260 Gene3D G3DSA:3.90.79.10 1 220 1.4E-55 T 14-10-2018 Afer_0235 1a6f1d8e7d01d6da3599da478a9460cb 260 SUPERFAMILY SSF55811 9 186 2.75E-16 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Afer_0235 1a6f1d8e7d01d6da3599da478a9460cb 260 Pfam PF00293 NUDIX domain 10 184 5.3E-6 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Afer_1158 7d0ba9229a60dd90b0f071c2cdb7d399 291 SUPERFAMILY SSF55021 174 269 5.04E-16 T 14-10-2018 Afer_1158 7d0ba9229a60dd90b0f071c2cdb7d399 291 Gene3D G3DSA:3.40.190.10 93 161 2.3E-5 T 14-10-2018 Afer_1158 7d0ba9229a60dd90b0f071c2cdb7d399 291 PIRSF PIRSF001500 4 271 1.1E-27 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Afer_1158 7d0ba9229a60dd90b0f071c2cdb7d399 291 SUPERFAMILY SSF53850 7 188 2.71E-21 T 14-10-2018 Afer_1158 7d0ba9229a60dd90b0f071c2cdb7d399 291 Pfam PF00800 Prephenate dehydratase 8 180 3.6E-15 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 Afer_1158 7d0ba9229a60dd90b0f071c2cdb7d399 291 Gene3D G3DSA:3.40.190.10 3 91 1.2E-8 T 14-10-2018 Afer_1158 7d0ba9229a60dd90b0f071c2cdb7d399 291 Gene3D G3DSA:3.30.70.260 180 275 5.1E-18 T 14-10-2018 Afer_1158 7d0ba9229a60dd90b0f071c2cdb7d399 291 Pfam PF01842 ACT domain 198 234 1.1E-7 T 14-10-2018 IPR002912 ACT domain Afer_0035 0ac9490546fa980369c91da501aa191b 320 PIRSF PIRSF005539 19 320 5.2E-85 T 14-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Afer_0035 0ac9490546fa980369c91da501aa191b 320 SUPERFAMILY SSF53474 30 313 4.48E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0035 0ac9490546fa980369c91da501aa191b 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 47 55 1.3E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Afer_0035 0ac9490546fa980369c91da501aa191b 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 75 86 1.3E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Afer_0035 0ac9490546fa980369c91da501aa191b 320 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 120 134 1.3E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Afer_0035 0ac9490546fa980369c91da501aa191b 320 Gene3D G3DSA:3.40.50.1820 20 315 3.5E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0035 0ac9490546fa980369c91da501aa191b 320 TIGRFAM TIGR01250 pro_imino_pep_2: proline-specific peptidase 26 313 1.9E-88 T 14-10-2018 IPR005945 Proline-specific peptidase GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 Afer_0035 0ac9490546fa980369c91da501aa191b 320 Pfam PF00561 alpha/beta hydrolase fold 47 299 1.3E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_0027 0ec5c11db87360fb6c37548227af6311 535 Pfam PF03023 MviN-like protein 43 481 2.4E-71 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0027 0ec5c11db87360fb6c37548227af6311 535 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 19 530 2.6E-72 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0027 0ec5c11db87360fb6c37548227af6311 535 PRINTS PR01806 Virulence factor MviN signature 435 452 7.1E-22 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0027 0ec5c11db87360fb6c37548227af6311 535 PRINTS PR01806 Virulence factor MviN signature 66 82 7.1E-22 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0027 0ec5c11db87360fb6c37548227af6311 535 PRINTS PR01806 Virulence factor MviN signature 383 402 7.1E-22 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0027 0ec5c11db87360fb6c37548227af6311 535 PRINTS PR01806 Virulence factor MviN signature 285 311 7.1E-22 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0027 0ec5c11db87360fb6c37548227af6311 535 PRINTS PR01806 Virulence factor MviN signature 149 173 7.1E-22 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0027 0ec5c11db87360fb6c37548227af6311 535 PRINTS PR01806 Virulence factor MviN signature 47 66 7.1E-22 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0027 0ec5c11db87360fb6c37548227af6311 535 PRINTS PR01806 Virulence factor MviN signature 173 194 7.1E-22 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ Afer_0542 255f9f83296da095f34c14f16fb536f4 690 Gene3D G3DSA:2.130.10.120 83 415 3.8E-184 T 14-10-2018 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 SUPERFAMILY SSF53474 425 672 1.47E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0542 255f9f83296da095f34c14f16fb536f4 690 Gene3D G3DSA:3.40.50.1820 34 681 3.8E-184 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0542 255f9f83296da095f34c14f16fb536f4 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 539 559 5.3E-38 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 455 473 5.3E-38 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 598 613 5.3E-38 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 616 638 5.3E-38 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 481 505 5.3E-38 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 509 528 5.3E-38 T 14-10-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 Pfam PF00326 Prolyl oligopeptidase family 470 685 6.5E-55 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 26 409 1.6E-46 T 14-10-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 Afer_0542 255f9f83296da095f34c14f16fb536f4 690 SUPERFAMILY SSF50993 20 420 1.36E-46 T 14-10-2018 Afer_0995 32b2928258785446c9e7795b59b12f41 349 ProSitePatterns PS00356 LacI-type HTH domain signature. 16 34 - T 14-10-2018 Afer_0995 32b2928258785446c9e7795b59b12f41 349 Gene3D G3DSA:1.10.260.40 12 70 5.2E-22 T 14-10-2018 Afer_0995 32b2928258785446c9e7795b59b12f41 349 SUPERFAMILY SSF53822 75 340 1.29E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Afer_0995 32b2928258785446c9e7795b59b12f41 349 Gene3D G3DSA:3.40.50.2300 174 338 7.6E-67 T 14-10-2018 Afer_0995 32b2928258785446c9e7795b59b12f41 349 SUPERFAMILY SSF47413 13 67 4.1E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Afer_0995 32b2928258785446c9e7795b59b12f41 349 Gene3D G3DSA:3.40.50.2300 76 333 7.6E-67 T 14-10-2018 Afer_0995 32b2928258785446c9e7795b59b12f41 349 Pfam PF13377 Periplasmic binding protein-like domain 182 340 1.5E-27 T 14-10-2018 Afer_0995 32b2928258785446c9e7795b59b12f41 349 SMART SM00354 13 85 3.4E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_0995 32b2928258785446c9e7795b59b12f41 349 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 2.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_0995 32b2928258785446c9e7795b59b12f41 349 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 25 35 2.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_0995 32b2928258785446c9e7795b59b12f41 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 60 1.1E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 Afer_0758 162e3ab6f76e43e71986aed8863cfe61 299 Pfam PF12697 Alpha/beta hydrolase family 42 284 9.1E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_0758 162e3ab6f76e43e71986aed8863cfe61 299 Gene3D G3DSA:3.40.50.1820 2 293 1.9E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0758 162e3ab6f76e43e71986aed8863cfe61 299 SUPERFAMILY SSF53474 41 290 3.24E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1901 8aa29d7232450f5225d6bb673ebb77aa 159 Gene3D G3DSA:2.30.30.840 1 60 5.0E-20 T 14-10-2018 Afer_1901 8aa29d7232450f5225d6bb673ebb77aa 159 SUPERFAMILY SSF141259 2 68 1.7E-12 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily Afer_1901 8aa29d7232450f5225d6bb673ebb77aa 159 SMART SM01058 2 112 6.3E-29 T 14-10-2018 IPR003711 CarD-like/TRCF domain Afer_1901 8aa29d7232450f5225d6bb673ebb77aa 159 Pfam PF02559 CarD-like/TRCF domain 3 110 3.0E-17 T 14-10-2018 IPR003711 CarD-like/TRCF domain Afer_1901 8aa29d7232450f5225d6bb673ebb77aa 159 Gene3D G3DSA:1.20.58.1290 61 159 1.2E-35 T 14-10-2018 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 Gene3D G3DSA:3.40.50.720 13 83 8.2E-9 T 14-10-2018 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 Gene3D G3DSA:3.90.190.20 304 436 2.8E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 14 433 3.9E-101 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 SUPERFAMILY SSF53244 298 435 4.58E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 Gene3D G3DSA:3.40.1190.10 94 298 9.8E-44 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 13 435 28.066 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 300 363 2.8E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 SUPERFAMILY SSF53623 97 296 3.01E-40 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1247 0ba54928a8b598702230abd32a2046ec 437 SUPERFAMILY SSF51735 9 81 9.45E-8 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1247 0ba54928a8b598702230abd32a2046ec 437 Pfam PF08245 Mur ligase middle domain 110 279 2.5E-23 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Afer_1657 d4a3c8e6076a54b478c4452e02952347 168 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 9 168 23.574 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Afer_1657 d4a3c8e6076a54b478c4452e02952347 168 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 12 167 1.2E-45 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Afer_1657 d4a3c8e6076a54b478c4452e02952347 168 SUPERFAMILY SSF50486 11 167 2.28E-42 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Afer_1657 d4a3c8e6076a54b478c4452e02952347 168 Gene3D G3DSA:3.10.300.10 4 168 1.1E-39 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 Afer_1505 09900ab8aaef9c057f987945d5db0146 185 Gene3D G3DSA:1.10.1740.10 4 88 8.5E-12 T 14-10-2018 Afer_1505 09900ab8aaef9c057f987945d5db0146 185 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 170 5.9E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_1505 09900ab8aaef9c057f987945d5db0146 185 Pfam PF08281 Sigma-70, region 4 120 169 1.1E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Afer_1505 09900ab8aaef9c057f987945d5db0146 185 Pfam PF04542 Sigma-70 region 2 28 93 2.0E-7 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_1505 09900ab8aaef9c057f987945d5db0146 185 Gene3D G3DSA:1.10.10.10 89 177 4.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1505 09900ab8aaef9c057f987945d5db0146 185 SUPERFAMILY SSF88659 119 174 2.43E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_1505 09900ab8aaef9c057f987945d5db0146 185 SUPERFAMILY SSF88946 5 111 1.14E-14 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0339 ff2e7028674f49eafbeed6f9ec5c313b 361 Gene3D G3DSA:1.10.8.640 23 103 1.7E-16 T 14-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily Afer_0339 ff2e7028674f49eafbeed6f9ec5c313b 361 Pfam PF03918 Cytochrome C biogenesis protein 13 136 4.9E-22 T 14-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family Afer_0339 ff2e7028674f49eafbeed6f9ec5c313b 361 SUPERFAMILY SSF48452 232 330 9.17E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Afer_0339 ff2e7028674f49eafbeed6f9ec5c313b 361 Gene3D G3DSA:1.25.40.10 228 341 4.7E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Afer_1970 c258c9841cc20900ecb9c2ee4a7f0158 342 SUPERFAMILY SSF141130 15 312 3.79E-73 T 14-10-2018 Afer_1970 c258c9841cc20900ecb9c2ee4a7f0158 342 Pfam PF03069 Acetamidase/Formamidase family 23 162 4.4E-7 T 14-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Afer_1970 c258c9841cc20900ecb9c2ee4a7f0158 342 Pfam PF03069 Acetamidase/Formamidase family 169 237 3.7E-15 T 14-10-2018 IPR004304 Acetamidase/Formamidase GO:0016811 Afer_1970 c258c9841cc20900ecb9c2ee4a7f0158 342 Gene3D G3DSA:3.10.28.20 237 315 1.2E-10 T 14-10-2018 Afer_1970 c258c9841cc20900ecb9c2ee4a7f0158 342 Gene3D G3DSA:2.60.120.580 138 234 3.3E-27 T 14-10-2018 Afer_1970 c258c9841cc20900ecb9c2ee4a7f0158 342 Gene3D G3DSA:2.60.120.580 13 115 1.8E-17 T 14-10-2018 Afer_0080 e2e58efc449b6b48783a1e9cef53517b 303 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 99 268 4.4E-47 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 Afer_0080 e2e58efc449b6b48783a1e9cef53517b 303 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 208 224 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site Afer_0080 e2e58efc449b6b48783a1e9cef53517b 303 Gene3D G3DSA:3.40.50.720 92 274 1.1E-72 T 14-10-2018 Afer_0080 e2e58efc449b6b48783a1e9cef53517b 303 SUPERFAMILY SSF51735 93 268 8.88E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0080 e2e58efc449b6b48783a1e9cef53517b 303 Gene3D G3DSA:3.40.50.720 51 297 1.1E-72 T 14-10-2018 Afer_1057 ffd8f11cce9bb8f420cc06c838f90336 246 Gene3D G3DSA:3.40.50.720 6 245 6.7E-46 T 14-10-2018 Afer_1057 ffd8f11cce9bb8f420cc06c838f90336 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.3E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1057 ffd8f11cce9bb8f420cc06c838f90336 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.3E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1057 ffd8f11cce9bb8f420cc06c838f90336 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.3E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1057 ffd8f11cce9bb8f420cc06c838f90336 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 242 1.4E-37 T 14-10-2018 Afer_1057 ffd8f11cce9bb8f420cc06c838f90336 246 SUPERFAMILY SSF51735 7 242 2.11E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0385 d1ec88e73ea66c2da4f9705fab3748af 86 Hamap MF_00422 Protein translocase subunit SecE [secE]. 28 83 11.462 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Afer_0385 d1ec88e73ea66c2da4f9705fab3748af 86 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 32 84 4.8E-14 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 Afer_0385 d1ec88e73ea66c2da4f9705fab3748af 86 Gene3D G3DSA:1.20.5.1030 28 84 1.1E-13 T 14-10-2018 IPR038379 SecE superfamily Afer_0385 d1ec88e73ea66c2da4f9705fab3748af 86 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 30 84 1.7E-14 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 Afer_1941 272e7975a2319c61bd5b61436c27c715 289 Gene3D G3DSA:1.10.150.650 92 168 4.1E-60 T 14-10-2018 Afer_1941 272e7975a2319c61bd5b61436c27c715 289 SUPERFAMILY SSF89550 1 279 4.12E-28 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Afer_1941 272e7975a2319c61bd5b61436c27c715 289 Gene3D G3DSA:3.20.20.140 2 249 4.1E-60 T 14-10-2018 Afer_1941 272e7975a2319c61bd5b61436c27c715 289 SMART SM00481 2 64 4.4E-7 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Afer_1937 2379c65e3d22623a8833ac3707564bd6 375 SUPERFAMILY SSF56300 9 299 8.26E-30 T 14-10-2018 Afer_1937 2379c65e3d22623a8833ac3707564bd6 375 Gene3D G3DSA:3.60.21.10 7 248 1.3E-24 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Afer_1937 2379c65e3d22623a8833ac3707564bd6 375 Pfam PF00149 Calcineurin-like phosphoesterase 9 181 6.1E-8 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Afer_1937 2379c65e3d22623a8833ac3707564bd6 375 PIRSF PIRSF033093 7 374 5.3E-77 T 14-10-2018 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type Afer_0953 b2d64e4841e37d2fbf01c375bfab530e 335 Pfam PF02618 YceG-like family 42 329 2.7E-67 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Afer_0953 b2d64e4841e37d2fbf01c375bfab530e 335 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 9 334 27.926 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Afer_0953 b2d64e4841e37d2fbf01c375bfab530e 335 Gene3D G3DSA:1.10.8.1150 35 108 1.4E-8 T 14-10-2018 Afer_0953 b2d64e4841e37d2fbf01c375bfab530e 335 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 10 331 8.4E-50 T 14-10-2018 IPR003770 Endolytic murein transglycosylase Afer_0073 83c8a16d44d97dbd5aea3de1c8f5995c 320 Gene3D G3DSA:2.40.260.10 38 175 1.2E-18 T 14-10-2018 IPR023365 Sortase domain superfamily Afer_0073 83c8a16d44d97dbd5aea3de1c8f5995c 320 SUPERFAMILY SSF63817 44 173 3.53E-15 T 14-10-2018 IPR023365 Sortase domain superfamily Afer_0073 83c8a16d44d97dbd5aea3de1c8f5995c 320 Pfam PF04203 Sortase family 53 172 1.1E-9 T 14-10-2018 IPR005754 Sortase family Afer_2023 d3719731e28d38a6b03034664c53269f 394 SUPERFAMILY SSF89796 11 387 9.03E-123 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Afer_2023 d3719731e28d38a6b03034664c53269f 394 Gene3D G3DSA:3.40.50.10540 12 332 3.6E-126 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Afer_2023 d3719731e28d38a6b03034664c53269f 394 Pfam PF02515 CoA-transferase family III 13 378 9.0E-118 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Afer_2023 d3719731e28d38a6b03034664c53269f 394 Gene3D G3DSA:3.30.1540.10 234 325 3.6E-126 T 14-10-2018 Afer_0863 caacac24cae0b9acb47749d80a1cba2d 188 SMART SM00479 1 176 1.9E-21 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Afer_0863 caacac24cae0b9acb47749d80a1cba2d 188 Pfam PF00929 Exonuclease 4 166 4.7E-26 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Afer_0863 caacac24cae0b9acb47749d80a1cba2d 188 SUPERFAMILY SSF53098 2 173 3.25E-36 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0863 caacac24cae0b9acb47749d80a1cba2d 188 Gene3D G3DSA:3.30.420.10 1 184 6.1E-64 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0036 19f9f2a3ea485d8aa284adb54cad4ebf 390 SUPERFAMILY SSF103473 8 380 2.49E-30 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_0036 19f9f2a3ea485d8aa284adb54cad4ebf 390 Gene3D G3DSA:1.20.1250.20 4 375 1.2E-30 T 14-10-2018 Afer_0036 19f9f2a3ea485d8aa284adb54cad4ebf 390 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Afer_0036 19f9f2a3ea485d8aa284adb54cad4ebf 390 Pfam PF07690 Major Facilitator Superfamily 16 344 2.0E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1490 f20f4279b09a07d3d1bc159a00cd14ee 415 Pfam PF07690 Major Facilitator Superfamily 15 350 2.1E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1490 f20f4279b09a07d3d1bc159a00cd14ee 415 SUPERFAMILY SSF103473 4 392 2.09E-43 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1490 f20f4279b09a07d3d1bc159a00cd14ee 415 Gene3D G3DSA:1.20.1250.20 5 384 7.1E-36 T 14-10-2018 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 162 183 1.5E-20 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.5E-20 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 1.5E-20 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 195 219 1.5E-20 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 1.5E-20 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 Pfam PF00459 Inositol monophosphatase family 63 249 4.0E-27 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 Gene3D G3DSA:3.30.540.10 8 139 3.5E-20 T 14-10-2018 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 198 212 - T 14-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 Gene3D G3DSA:3.40.190.80 140 249 8.3E-22 T 14-10-2018 Afer_0617 c1e3f88acc96a6f37ce22bf4f4b88232 257 SUPERFAMILY SSF56655 10 252 4.32E-43 T 14-10-2018 Afer_2003 cfa8d5ce041acda63a295ed9168bb18d 412 Pfam PF02754 Cysteine-rich domain 292 373 4.8E-9 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_2003 cfa8d5ce041acda63a295ed9168bb18d 412 Pfam PF02754 Cysteine-rich domain 180 245 9.9E-6 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_2003 cfa8d5ce041acda63a295ed9168bb18d 412 SUPERFAMILY SSF46548 36 100 4.76E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_2003 cfa8d5ce041acda63a295ed9168bb18d 412 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_2003 cfa8d5ce041acda63a295ed9168bb18d 412 Pfam PF13183 4Fe-4S dicluster domain 28 94 1.0E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_2003 cfa8d5ce041acda63a295ed9168bb18d 412 Gene3D G3DSA:3.30.70.20 26 130 4.6E-5 T 14-10-2018 Afer_1640 238f7ab952d1a6f7d15dd268aaf6c06b 470 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 30 451 3.8E-187 T 14-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 Afer_1640 238f7ab952d1a6f7d15dd268aaf6c06b 470 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 48 385 2.2E-74 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Afer_1640 238f7ab952d1a6f7d15dd268aaf6c06b 470 Gene3D G3DSA:3.90.1150.160 366 470 1.7E-29 T 14-10-2018 Afer_1640 238f7ab952d1a6f7d15dd268aaf6c06b 470 SUPERFAMILY SSF53383 27 452 3.45E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1640 238f7ab952d1a6f7d15dd268aaf6c06b 470 Gene3D G3DSA:3.40.640.10 73 364 1.8E-82 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0927 129a7a3c159adf82fdab629353025146 511 Gene3D G3DSA:2.90.10.10 337 386 6.2E-8 T 14-10-2018 IPR036426 Bulb-type lectin domain superfamily Afer_0927 129a7a3c159adf82fdab629353025146 511 Gene3D G3DSA:2.90.10.10 246 307 1.1E-17 T 14-10-2018 IPR036426 Bulb-type lectin domain superfamily Afer_0927 129a7a3c159adf82fdab629353025146 511 Gene3D G3DSA:2.90.10.10 308 336 5.3E-7 T 14-10-2018 IPR036426 Bulb-type lectin domain superfamily Afer_0927 129a7a3c159adf82fdab629353025146 511 Pfam PF01453 D-mannose binding lectin 262 333 1.1E-15 T 14-10-2018 IPR001480 Bulb-type lectin domain Afer_0927 129a7a3c159adf82fdab629353025146 511 SUPERFAMILY SSF51110 260 362 8.51E-24 T 14-10-2018 IPR036426 Bulb-type lectin domain superfamily Afer_0927 129a7a3c159adf82fdab629353025146 511 SMART SM00108 254 364 4.7E-13 T 14-10-2018 IPR001480 Bulb-type lectin domain Afer_1764 cbe29f3d897b24dc6c3fb410ba666c21 182 SUPERFAMILY SSF69754 1 94 4.84E-16 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Afer_1764 cbe29f3d897b24dc6c3fb410ba666c21 182 Gene3D G3DSA:3.30.160.100 2 119 4.5E-15 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like Afer_1764 cbe29f3d897b24dc6c3fb410ba666c21 182 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 5.3E-12 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Afer_1764 cbe29f3d897b24dc6c3fb410ba666c21 182 Gene3D G3DSA:3.30.505.50 127 177 8.9E-18 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily Afer_1764 cbe29f3d897b24dc6c3fb410ba666c21 182 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 117 169 6.1E-20 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal Afer_1764 cbe29f3d897b24dc6c3fb410ba666c21 182 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 173 19.808 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid Afer_1764 cbe29f3d897b24dc6c3fb410ba666c21 182 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 97 1.2E-11 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 Afer_1109 24ac23150990a4e1733702faf4db7cf3 198 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 4 198 36.797 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Afer_1109 24ac23150990a4e1733702faf4db7cf3 198 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 33 179 3.0E-52 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Afer_1109 24ac23150990a4e1733702faf4db7cf3 198 SUPERFAMILY SSF54211 89 183 2.53E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_1109 24ac23150990a4e1733702faf4db7cf3 198 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 63 76 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 Afer_1109 24ac23150990a4e1733702faf4db7cf3 198 Gene3D G3DSA:3.30.230.40 92 198 2.5E-29 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Afer_1109 24ac23150990a4e1733702faf4db7cf3 198 Gene3D G3DSA:3.30.230.40 1 91 3.0E-30 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 Afer_1109 24ac23150990a4e1733702faf4db7cf3 198 SUPERFAMILY SSF54211 4 88 9.36E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 SUPERFAMILY SSF46689 24 83 7.98E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 37 77 1.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 SUPERFAMILY SSF48498 91 206 1.25E-23 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 ProSitePatterns PS01081 TetR-type HTH domain signature. 46 77 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 Pfam PF16859 Bacterial transcriptional repressor C-terminal 91 202 2.0E-29 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 Gene3D G3DSA:1.10.10.60 18 72 2.0E-19 T 14-10-2018 Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 7.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 7.1E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_0061 a55aa82da4212f9eb661cec49033eee3 224 Gene3D G3DSA:1.10.357.10 73 210 3.1E-32 T 14-10-2018 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 SUPERFAMILY SSF53790 1 239 7.07E-66 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 Gene3D G3DSA:3.30.950.10 117 239 3.8E-30 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 Gene3D G3DSA:3.40.1010.10 1 116 1.7E-36 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 SUPERFAMILY SSF69618 244 478 5.75E-52 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 81 114 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 Gene3D G3DSA:3.40.50.10090 276 403 4.7E-29 T 14-10-2018 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 213 2.1E-44 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 231 6.3E-76 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 Gene3D G3DSA:3.40.50.10090 408 489 2.9E-9 T 14-10-2018 Afer_0251 3c2521377234c129255ed132dc48b0a0 490 Pfam PF02602 Uroporphyrinogen-III synthase HemD 257 472 8.0E-47 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0832 72a5f5e297eddd77cf64534871479b7e 225 SUPERFAMILY SSF53474 6 219 7.97E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0832 72a5f5e297eddd77cf64534871479b7e 225 Gene3D G3DSA:3.40.50.1820 2 221 1.1E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0832 72a5f5e297eddd77cf64534871479b7e 225 Pfam PF12146 Serine aminopeptidase, S33 58 196 2.4E-12 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 Afer_1010 526d1b4210d1847ef883888b271fac6c 329 SUPERFAMILY SSF50129 5 144 1.11E-37 T 14-10-2018 IPR011032 GroES-like superfamily Afer_1010 526d1b4210d1847ef883888b271fac6c 329 Gene3D G3DSA:3.90.180.10 18 325 1.3E-103 T 14-10-2018 Afer_1010 526d1b4210d1847ef883888b271fac6c 329 SMART SM00829 12 325 9.6E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Afer_1010 526d1b4210d1847ef883888b271fac6c 329 SUPERFAMILY SSF51735 118 288 8.24E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1010 526d1b4210d1847ef883888b271fac6c 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 5 327 2.7E-115 T 14-10-2018 IPR014188 Acrylyl-CoA reductase AcuI Afer_1010 526d1b4210d1847ef883888b271fac6c 329 Gene3D G3DSA:3.40.50.720 127 295 1.3E-103 T 14-10-2018 Afer_1010 526d1b4210d1847ef883888b271fac6c 329 Pfam PF00107 Zinc-binding dehydrogenase 160 271 6.4E-13 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Afer_0582 8a02f603149c2e92c78e3e1e1ab64001 447 Pfam PF01039 Carboxyl transferase domain 16 443 2.7E-114 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Afer_0582 8a02f603149c2e92c78e3e1e1ab64001 447 SUPERFAMILY SSF52096 203 447 2.31E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0582 8a02f603149c2e92c78e3e1e1ab64001 447 SUPERFAMILY SSF52096 25 191 2.7E-30 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0582 8a02f603149c2e92c78e3e1e1ab64001 447 Gene3D G3DSA:3.90.226.10 199 447 4.2E-85 T 14-10-2018 Afer_0582 8a02f603149c2e92c78e3e1e1ab64001 447 Gene3D G3DSA:3.90.226.10 8 192 6.4E-37 T 14-10-2018 Afer_0783 005763accf1b0984080b33d3f15ccd08 283 Pfam PF07728 AAA domain (dynein-related subfamily) 38 182 2.4E-11 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 Afer_0783 005763accf1b0984080b33d3f15ccd08 283 Gene3D G3DSA:3.40.50.300 21 201 1.6E-28 T 14-10-2018 Afer_0783 005763accf1b0984080b33d3f15ccd08 283 SMART SM00382 35 194 2.1E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0783 005763accf1b0984080b33d3f15ccd08 283 SUPERFAMILY SSF52540 29 271 1.67E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1571 54f55ed709ae0a74b189cd7805611f4c 159 Gene3D G3DSA:2.40.50.140 90 158 3.5E-14 T 14-10-2018 Afer_1571 54f55ed709ae0a74b189cd7805611f4c 159 Pfam PF01957 NfeD-like C-terminal, partner-binding 8 147 3.1E-13 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain Afer_1571 54f55ed709ae0a74b189cd7805611f4c 159 SUPERFAMILY SSF141322 91 146 3.66E-7 T 14-10-2018 Afer_1615 40cd4e407d42a83aa094885d532488bf 396 Gene3D G3DSA:1.10.150.80 209 303 5.8E-19 T 14-10-2018 Afer_1615 40cd4e407d42a83aa094885d532488bf 396 SUPERFAMILY SSF47819 207 299 8.07E-18 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Afer_1615 40cd4e407d42a83aa094885d532488bf 396 Pfam PF01612 3'-5' exonuclease 22 184 2.7E-29 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Afer_1615 40cd4e407d42a83aa094885d532488bf 396 SMART SM00474 21 185 1.7E-26 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 Afer_1615 40cd4e407d42a83aa094885d532488bf 396 SUPERFAMILY SSF53098 18 221 1.01E-55 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1615 40cd4e407d42a83aa094885d532488bf 396 Pfam PF00570 HRDC domain 231 294 2.8E-12 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Afer_1615 40cd4e407d42a83aa094885d532488bf 396 Gene3D G3DSA:3.30.420.10 10 207 4.5E-59 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1615 40cd4e407d42a83aa094885d532488bf 396 SMART SM00341 224 304 4.5E-9 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 Gene3D G3DSA:3.30.499.20 4 287 1.6E-98 T 14-10-2018 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 210 223 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 196 209 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 83 96 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 287 301 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 120 133 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 400 413 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 109 117 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 344 355 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 PRINTS PR00415 Aconitase family signature 134 149 1.9E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 SUPERFAMILY SSF53732 1 466 3.14E-163 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 461 1.7E-225 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 59.302 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 1.5E-159 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 Afer_1534 2eede2c1eceb6ceddbde4c17e72e057f 468 Gene3D G3DSA:3.30.499.10 328 468 4.3E-48 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 Afer_1799 287316490a2ebd2edcd3d5f569d155fe 173 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 24 168 1.4E-30 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 Afer_1799 287316490a2ebd2edcd3d5f569d155fe 173 Hamap MF_01398 ATP synthase subunit b [atpF]. 14 151 14.007 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Afer_1799 287316490a2ebd2edcd3d5f569d155fe 173 SUPERFAMILY SSF81573 76 134 1.19E-7 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily Afer_1799 287316490a2ebd2edcd3d5f569d155fe 173 Pfam PF00430 ATP synthase B/B' CF(0) 20 149 1.8E-28 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 Afer_2016 ca1cf2cfeaf21d6062d7db557b1f5fe2 112 Pfam PF01850 PIN domain 4 107 2.1E-6 T 14-10-2018 IPR002716 PIN domain Afer_2016 ca1cf2cfeaf21d6062d7db557b1f5fe2 112 Gene3D G3DSA:3.40.50.1010 1 108 4.1E-17 T 14-10-2018 Afer_2016 ca1cf2cfeaf21d6062d7db557b1f5fe2 112 SUPERFAMILY SSF88723 1 107 6.54E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily Afer_0489 cf1be64dc912880af716d7604f0be9de 409 Pfam PF13439 Glycosyltransferase Family 4 20 221 1.7E-22 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Afer_0489 cf1be64dc912880af716d7604f0be9de 409 Gene3D G3DSA:3.40.50.2000 13 403 3.9E-71 T 14-10-2018 Afer_0489 cf1be64dc912880af716d7604f0be9de 409 Gene3D G3DSA:3.40.50.2000 218 386 3.9E-71 T 14-10-2018 Afer_0489 cf1be64dc912880af716d7604f0be9de 409 Pfam PF13692 Glycosyl transferases group 1 243 371 3.1E-24 T 14-10-2018 Afer_0489 cf1be64dc912880af716d7604f0be9de 409 SUPERFAMILY SSF53756 8 408 7.63E-75 T 14-10-2018 Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 PRINTS PR00342 Rhesus blood group protein signature 224 242 1.3E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 PRINTS PR00342 Rhesus blood group protein signature 255 277 1.3E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 PRINTS PR00342 Rhesus blood group protein signature 350 366 1.3E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 PRINTS PR00342 Rhesus blood group protein signature 45 62 1.3E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 PRINTS PR00342 Rhesus blood group protein signature 291 304 1.3E-6 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 Gene3D G3DSA:1.10.3430.10 3 455 3.7E-111 T 14-10-2018 IPR029020 Ammonium/urea transporter Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 Pfam PF00909 Ammonium Transporter Family 19 441 2.6E-82 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 SUPERFAMILY SSF111352 11 425 7.98E-97 T 14-10-2018 Afer_1995 1e7f25c0109a2724d16aa54d5fa8b7c3 481 ProSitePatterns PS01219 Ammonium transporters signature. 185 210 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 Afer_0424 ceba582321b5989b40ac1e275df9c32f 132 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 13 129 1.2E-56 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0424 ceba582321b5989b40ac1e275df9c32f 132 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 9 132 33.019 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Afer_0424 ceba582321b5989b40ac1e275df9c32f 132 Gene3D G3DSA:3.30.420.80 6 132 8.3E-54 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0424 ceba582321b5989b40ac1e275df9c32f 132 SUPERFAMILY SSF53137 17 132 6.73E-50 T 14-10-2018 Afer_0424 ceba582321b5989b40ac1e275df9c32f 132 PIRSF PIRSF002131 5 132 2.4E-53 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Afer_0424 ceba582321b5989b40ac1e275df9c32f 132 Pfam PF00411 Ribosomal protein S11 22 131 7.3E-48 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 Afer_1697 29107d81671f9e80bdb3062b779386f0 233 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 62 75 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1697 29107d81671f9e80bdb3062b779386f0 233 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 12 223 1.4E-35 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1697 29107d81671f9e80bdb3062b779386f0 233 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 11 223 2.4E-32 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1697 29107d81671f9e80bdb3062b779386f0 233 SUPERFAMILY SSF51366 8 226 1.06E-47 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Afer_1697 29107d81671f9e80bdb3062b779386f0 233 Gene3D G3DSA:3.20.20.70 6 231 2.8E-53 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1697 29107d81671f9e80bdb3062b779386f0 233 SMART SM00934 10 224 2.1E-53 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1724 b7645865eeb4b5c74c899d19c46c6ab3 401 Pfam PF13535 ATP-grasp domain 142 283 5.5E-18 T 14-10-2018 Afer_1724 b7645865eeb4b5c74c899d19c46c6ab3 401 Gene3D G3DSA:3.30.470.20 95 397 1.2E-56 T 14-10-2018 Afer_1724 b7645865eeb4b5c74c899d19c46c6ab3 401 SUPERFAMILY SSF56059 97 305 3.54E-20 T 14-10-2018 Afer_0712 5df2a2a347d6b625560794faad9fd81f 195 Gene3D G3DSA:1.10.340.30 15 141 2.4E-5 T 14-10-2018 Afer_0712 5df2a2a347d6b625560794faad9fd81f 195 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 25 185 1.1E-11 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Afer_0712 5df2a2a347d6b625560794faad9fd81f 195 SUPERFAMILY SSF48150 9 151 9.25E-14 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Afer_0712 5df2a2a347d6b625560794faad9fd81f 195 TIGRFAM TIGR03252 TIGR03252: uncharacterized HhH-GPD family protein 3 193 8.8E-70 T 14-10-2018 IPR017658 Conserved hypothetical protein CHP03252, HhH-GPD Afer_1531 f9fc3eae135d9f117039d37978ab2530 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 239 252 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Afer_1531 f9fc3eae135d9f117039d37978ab2530 398 Gene3D G3DSA:3.90.1150.10 28 391 1.8E-125 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1531 f9fc3eae135d9f117039d37978ab2530 398 SUPERFAMILY SSF53383 6 397 1.88E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1531 f9fc3eae135d9f117039d37978ab2530 398 Pfam PF00155 Aminotransferase class I and II 34 391 2.5E-70 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Afer_1531 f9fc3eae135d9f117039d37978ab2530 398 Gene3D G3DSA:3.40.640.10 66 289 1.8E-125 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1122 395e21cce4fbdf9fc3992466b7babdc5 192 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 51 73 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Afer_1122 395e21cce4fbdf9fc3992466b7babdc5 192 Gene3D G3DSA:1.20.120.1760 5 179 9.0E-8 T 14-10-2018 Afer_1122 395e21cce4fbdf9fc3992466b7babdc5 192 PIRSF PIRSF000847 4 187 2.3E-29 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Afer_1122 395e21cce4fbdf9fc3992466b7babdc5 192 Pfam PF01066 CDP-alcohol phosphatidyltransferase 9 73 2.1E-9 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Afer_0265 19d5f3c78cff1b27f699e76ee8565f5e 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 132 7.8E-21 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Afer_0265 19d5f3c78cff1b27f699e76ee8565f5e 345 Pfam PF00107 Zinc-binding dehydrogenase 178 271 2.6E-15 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Afer_0265 19d5f3c78cff1b27f699e76ee8565f5e 345 SMART SM00829 10 340 4.6E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Afer_0265 19d5f3c78cff1b27f699e76ee8565f5e 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 Afer_0265 19d5f3c78cff1b27f699e76ee8565f5e 345 Gene3D G3DSA:3.90.180.10 4 331 2.6E-82 T 14-10-2018 Afer_0265 19d5f3c78cff1b27f699e76ee8565f5e 345 Gene3D G3DSA:3.40.50.720 158 304 2.6E-82 T 14-10-2018 Afer_0265 19d5f3c78cff1b27f699e76ee8565f5e 345 SUPERFAMILY SSF50129 2 166 2.04E-39 T 14-10-2018 IPR011032 GroES-like superfamily Afer_0265 19d5f3c78cff1b27f699e76ee8565f5e 345 SUPERFAMILY SSF51735 146 309 1.97E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1549 b52704b48d89bf084420c19caabedc32 483 SUPERFAMILY SSF89095 361 474 5.23E-5 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 Afer_1549 b52704b48d89bf084420c19caabedc32 483 Gene3D G3DSA:1.10.10.410 419 477 1.3E-6 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal Afer_1549 b52704b48d89bf084420c19caabedc32 483 SMART SM00845 335 476 0.0011 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Afer_1549 b52704b48d89bf084420c19caabedc32 483 Pfam PF02934 GatB/GatE catalytic domain 12 296 7.3E-109 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 Afer_1549 b52704b48d89bf084420c19caabedc32 483 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 9 477 30.355 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Afer_1549 b52704b48d89bf084420c19caabedc32 483 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 10 474 1.9E-129 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 Afer_1549 b52704b48d89bf084420c19caabedc32 483 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 152 166 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 Afer_1549 b52704b48d89bf084420c19caabedc32 483 Pfam PF02637 GatB domain 360 474 1.2E-8 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 Afer_1549 b52704b48d89bf084420c19caabedc32 483 SUPERFAMILY SSF55931 11 301 1.31E-109 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Afer_1635 9529cc5b623dfd9b3a433d4e0bb846be 184 SUPERFAMILY SSF46955 89 138 3.66E-7 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Afer_1635 9529cc5b623dfd9b3a433d4e0bb846be 184 Pfam PF12728 Helix-turn-helix domain 89 138 6.1E-12 T 14-10-2018 Afer_1635 9529cc5b623dfd9b3a433d4e0bb846be 184 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 89 134 2.6E-13 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 SUPERFAMILY SSF51735 6 157 6.58E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 Gene3D G3DSA:3.30.360.10 128 322 2.4E-120 T 14-10-2018 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 140 321 2.2E-42 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 3 335 31.793 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 336 6.2E-109 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 SUPERFAMILY SSF55347 129 322 1.49E-54 T 14-10-2018 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 Gene3D G3DSA:3.40.50.720 7 333 2.4E-120 T 14-10-2018 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 PIRSF PIRSF000148 3 340 3.1E-105 T 14-10-2018 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 SMART SM00859 5 120 5.3E-36 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Afer_0112 c0c9065fcc6b7ac2f6d28a4789ae2a5c 341 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 118 1.6E-28 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 Afer_1745 678f0a955f182ed3e2937a650e33035b 358 Gene3D G3DSA:3.40.50.2000 59 344 2.2E-29 T 14-10-2018 Afer_1745 678f0a955f182ed3e2937a650e33035b 358 Pfam PF13692 Glycosyl transferases group 1 178 317 9.1E-19 T 14-10-2018 Afer_1745 678f0a955f182ed3e2937a650e33035b 358 SUPERFAMILY SSF53756 2 350 8.52E-39 T 14-10-2018 Afer_1745 678f0a955f182ed3e2937a650e33035b 358 Gene3D G3DSA:3.40.50.2000 151 337 2.2E-29 T 14-10-2018 Afer_0615 5297d82bf5b2b9d0e848ad18f4cbbf3f 276 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 255 4.0E-33 T 14-10-2018 Afer_0615 5297d82bf5b2b9d0e848ad18f4cbbf3f 276 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 2.0E-11 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 Afer_0615 5297d82bf5b2b9d0e848ad18f4cbbf3f 276 Gene3D G3DSA:3.40.50.1000 5 256 1.4E-39 T 14-10-2018 IPR023214 HAD superfamily Afer_0615 5297d82bf5b2b9d0e848ad18f4cbbf3f 276 SUPERFAMILY SSF56784 5 260 3.34E-44 T 14-10-2018 IPR036412 HAD-like superfamily Afer_0615 5297d82bf5b2b9d0e848ad18f4cbbf3f 276 Gene3D G3DSA:3.30.1240.10 84 185 1.4E-39 T 14-10-2018 Afer_0094 04123fd5faf0799660cf7b62a9122752 688 Pfam PF01575 MaoC like domain 546 637 1.0E-21 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Afer_0094 04123fd5faf0799660cf7b62a9122752 688 Gene3D G3DSA:3.40.605.10 11 486 8.8E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Afer_0094 04123fd5faf0799660cf7b62a9122752 688 Gene3D G3DSA:3.40.309.10 259 474 8.8E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Afer_0094 04123fd5faf0799660cf7b62a9122752 688 SUPERFAMILY SSF54637 532 674 1.49E-33 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_0094 04123fd5faf0799660cf7b62a9122752 688 Pfam PF00171 Aldehyde dehydrogenase family 21 445 1.1E-59 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Afer_0094 04123fd5faf0799660cf7b62a9122752 688 TIGRFAM TIGR02278 PaaN-DH: phenylacetic acid degradation protein paaN 5 673 9.4E-271 T 14-10-2018 IPR011966 Phenylacetic acid degradation protein PaaN KEGG: 00360+3.3.2.12+1.2.1.91 Afer_0094 04123fd5faf0799660cf7b62a9122752 688 SUPERFAMILY SSF53720 4 502 4.19E-74 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Afer_0094 04123fd5faf0799660cf7b62a9122752 688 Gene3D G3DSA:3.10.129.10 534 687 4.4E-35 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 Gene3D G3DSA:2.40.50.140 38 134 2.2E-22 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 Gene3D G3DSA:2.40.50.140 135 217 9.8E-12 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 Gene3D G3DSA:2.40.50.140 300 382 4.4E-28 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 Pfam PF00575 S1 RNA binding domain 141 204 2.6E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 Pfam PF00575 S1 RNA binding domain 307 379 6.7E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 Pfam PF00575 S1 RNA binding domain 49 121 2.3E-13 T 14-10-2018 IPR003029 S1 domain GO:0003676 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 Pfam PF00575 S1 RNA binding domain 223 293 4.9E-24 T 14-10-2018 IPR003029 S1 domain GO:0003676 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 SUPERFAMILY SSF50249 123 208 1.79E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1079 52edf3c300df728cda092e3d8e959b59 427 SUPERFAMILY SSF50249 293 383 1.72E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1079 52edf3c300df728cda092e3d8e959b59 427 SUPERFAMILY SSF50249 223 308 6.27E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 362 380 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 52 70 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 118 137 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 159 176 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 70 84 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 245 266 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 188 208 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 323 342 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 PRINTS PR00681 Ribosomal protein S1 signature 142 158 1.2E-78 T 14-10-2018 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 SMART SM00316 50 121 1.2E-14 T 14-10-2018 IPR022967 RNA-binding domain, S1 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 SMART SM00316 223 293 2.4E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 SMART SM00316 137 204 5.3E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 SMART SM00316 308 379 1.3E-22 T 14-10-2018 IPR022967 RNA-binding domain, S1 Afer_1079 52edf3c300df728cda092e3d8e959b59 427 SUPERFAMILY SSF50249 42 146 4.65E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_1079 52edf3c300df728cda092e3d8e959b59 427 Gene3D G3DSA:2.40.50.140 220 299 2.2E-29 T 14-10-2018 Afer_1641 3878f7600e272f636b05ff4f5eba8bad 656 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 37 92 3.5E-12 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 Afer_1641 3878f7600e272f636b05ff4f5eba8bad 656 Gene3D G3DSA:3.30.300.30 529 656 7.4E-23 T 14-10-2018 Afer_1641 3878f7600e272f636b05ff4f5eba8bad 656 Pfam PF00501 AMP-binding enzyme 94 532 8.4E-79 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_1641 3878f7600e272f636b05ff4f5eba8bad 656 Pfam PF13193 AMP-binding enzyme C-terminal domain 541 617 1.7E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_1641 3878f7600e272f636b05ff4f5eba8bad 656 Gene3D G3DSA:3.40.50.12780 70 525 1.2E-97 T 14-10-2018 Afer_1641 3878f7600e272f636b05ff4f5eba8bad 656 SUPERFAMILY SSF56801 23 646 4.71E-154 T 14-10-2018 Afer_1753 52134fd8dfa39563f17581fbacae3408 137 SUPERFAMILY SSF102712 2 126 4.32E-29 T 14-10-2018 Afer_1753 52134fd8dfa39563f17581fbacae3408 137 Pfam PF14464 Prokaryotic homologs of the JAB domain 7 106 4.3E-22 T 14-10-2018 IPR028090 JAB domain, prokaryotic Afer_1753 52134fd8dfa39563f17581fbacae3408 137 SMART SM00232 1 128 7.3E-16 T 14-10-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 Afer_1753 52134fd8dfa39563f17581fbacae3408 137 Gene3D G3DSA:3.40.140.10 2 133 7.2E-37 T 14-10-2018 Afer_1107 c72dca161a80d23e2f4a5903e4289aed 246 Gene3D G3DSA:3.20.20.70 1 246 7.8E-58 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1107 c72dca161a80d23e2f4a5903e4289aed 246 SUPERFAMILY SSF51366 3 243 8.07E-41 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Afer_1107 c72dca161a80d23e2f4a5903e4289aed 246 Pfam PF00977 Histidine biosynthesis protein 3 234 5.5E-45 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Afer_1107 c72dca161a80d23e2f4a5903e4289aed 246 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 2 243 25.591 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 Afer_1470 2ef5db033623f7ca47160032e8b27723 631 SMART SM00267 229 404 2.1E-10 T 14-10-2018 IPR000160 GGDEF domain Afer_1470 2ef5db033623f7ca47160032e8b27723 631 Pfam PF00990 Diguanylate cyclase, GGDEF domain 241 329 9.1E-19 T 14-10-2018 IPR000160 GGDEF domain Afer_1470 2ef5db033623f7ca47160032e8b27723 631 SUPERFAMILY SSF55073 246 333 1.57E-17 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_1470 2ef5db033623f7ca47160032e8b27723 631 SUPERFAMILY SSF55785 120 212 4.76E-6 T 14-10-2018 IPR035965 PAS domain superfamily Afer_1470 2ef5db033623f7ca47160032e8b27723 631 Pfam PF13188 PAS domain 123 160 4.3E-5 T 14-10-2018 IPR000014 PAS domain Afer_1470 2ef5db033623f7ca47160032e8b27723 631 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 331 1.2E-16 T 14-10-2018 IPR000160 GGDEF domain Afer_1470 2ef5db033623f7ca47160032e8b27723 631 Gene3D G3DSA:3.30.70.270 236 399 5.4E-22 T 14-10-2018 Afer_1470 2ef5db033623f7ca47160032e8b27723 631 Gene3D G3DSA:3.30.450.20 116 215 1.9E-5 T 14-10-2018 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00410 Phenol hydroxylase reductase family signature 110 119 6.7E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00410 Phenol hydroxylase reductase family signature 126 145 6.7E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00410 Phenol hydroxylase reductase family signature 44 56 6.7E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00410 Phenol hydroxylase reductase family signature 218 226 6.7E-12 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 SUPERFAMILY SSF52343 106 248 2.62E-32 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 SUPERFAMILY SSF63380 14 119 5.79E-24 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 Gene3D G3DSA:2.40.30.10 12 115 1.3E-22 T 14-10-2018 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 Gene3D G3DSA:3.40.50.80 116 251 8.8E-30 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 65 72 2.1E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 126 145 2.1E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 44 54 2.1E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 151 160 2.1E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 218 226 2.1E-8 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 Pfam PF00970 Oxidoreductase FAD-binding domain 23 117 4.0E-14 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 Afer_0935 3c81ed5b0c1fbdbe795ebff0f14e4dd0 251 Pfam PF00175 Oxidoreductase NAD-binding domain 127 232 9.7E-13 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 Afer_1349 8285eea34ac90dfae403887d727fb086 344 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 5 279 7.4E-76 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Afer_1349 8285eea34ac90dfae403887d727fb086 344 Gene3D G3DSA:3.40.50.11270 15 99 6.4E-83 T 14-10-2018 Afer_1349 8285eea34ac90dfae403887d727fb086 344 Gene3D G3DSA:3.40.1010.20 10 278 6.4E-83 T 14-10-2018 Afer_1349 8285eea34ac90dfae403887d727fb086 344 Pfam PF02401 LytB protein 6 279 2.5E-71 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Afer_1349 8285eea34ac90dfae403887d727fb086 344 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 4 283 30.326 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 Afer_1349 8285eea34ac90dfae403887d727fb086 344 Gene3D G3DSA:3.40.1010.20 100 195 6.4E-83 T 14-10-2018 Afer_0457 64ae30e72130ad4429db9200ab381641 149 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 12 129 16.713 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Afer_0457 64ae30e72130ad4429db9200ab381641 149 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 14 124 9.7E-21 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 Gene3D G3DSA:3.40.1160.10 1 261 1.7E-75 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 SMART SM00359 274 355 7.6E-10 T 14-10-2018 IPR002478 PUA domain GO:0003723 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 PIRSF PIRSF000729 1 350 4.9E-103 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 SUPERFAMILY SSF88697 274 348 5.08E-17 T 14-10-2018 IPR015947 PUA-like superfamily Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 Pfam PF01472 PUA domain 274 336 6.8E-16 T 14-10-2018 IPR002478 PUA domain GO:0003723 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 Hamap MF_00456 Glutamate 5-kinase [proB]. 3 262 31.926 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 SUPERFAMILY SSF53633 3 246 1.44E-57 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 PRINTS PR00474 Glutamate 5-kinase family signature 40 54 3.8E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 PRINTS PR00474 Glutamate 5-kinase family signature 73 101 3.8E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 PRINTS PR00474 Glutamate 5-kinase family signature 205 225 3.8E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 PRINTS PR00474 Glutamate 5-kinase family signature 145 172 3.8E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 PRINTS PR00474 Glutamate 5-kinase family signature 113 134 3.8E-39 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 Gene3D G3DSA:2.30.130.10 263 349 1.9E-21 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 TIGRFAM TIGR01027 proB: glutamate 5-kinase 3 336 6.6E-101 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 ProSitePatterns PS00902 Glutamate 5-kinase signature. 203 220 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 Afer_0774 2f7753af0ed5f204430ee483cfd2c77e 362 Pfam PF00696 Amino acid kinase family 4 231 4.8E-39 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Afer_0657 852c2e07b6a886123e9297db4f82af50 254 SUPERFAMILY SSF54506 2 104 8.89E-23 T 14-10-2018 Afer_0657 852c2e07b6a886123e9297db4f82af50 254 Pfam PF01678 Diaminopimelate epimerase 128 238 3.7E-19 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Afer_0657 852c2e07b6a886123e9297db4f82af50 254 Pfam PF01678 Diaminopimelate epimerase 4 97 2.8E-17 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Afer_0657 852c2e07b6a886123e9297db4f82af50 254 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 3 244 1.9E-49 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Afer_0657 852c2e07b6a886123e9297db4f82af50 254 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 249 24.651 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 Afer_0657 852c2e07b6a886123e9297db4f82af50 254 Gene3D G3DSA:3.10.310.10 1 113 2.3E-28 T 14-10-2018 Afer_0657 852c2e07b6a886123e9297db4f82af50 254 SUPERFAMILY SSF54506 124 245 1.74E-27 T 14-10-2018 Afer_0657 852c2e07b6a886123e9297db4f82af50 254 Gene3D G3DSA:3.10.310.10 114 235 3.9E-31 T 14-10-2018 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 Pfam PF17392 Urocanase C-terminal domain 349 542 6.5E-91 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 Pfam PF17391 Urocanase N-terminal domain 11 137 9.0E-60 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 SUPERFAMILY SSF111326 4 551 4.05E-249 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 Hamap MF_00577 Urocanate hydratase [hutU]. 4 552 49.138 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 549 1.5E-279 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 Gene3D G3DSA:3.40.50.10730 141 346 1.1E-244 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 Gene3D G3DSA:3.40.1770.10 16 538 1.1E-244 T 14-10-2018 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 PIRSF PIRSF001423 1 552 1.5E-279 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_1414 cd4529c133e7e402583fa66df9e1ac0f 552 Pfam PF01175 Urocanase Rossmann-like domain 140 346 1.2E-82 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_0808 55ea4dd58128a45656c06f1d80680bc8 390 SUPERFAMILY SSF53335 228 363 1.27E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0808 55ea4dd58128a45656c06f1d80680bc8 390 Gene3D G3DSA:3.40.50.150 222 390 4.4E-25 T 14-10-2018 Afer_0808 55ea4dd58128a45656c06f1d80680bc8 390 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 244 343 2.8E-7 T 14-10-2018 Afer_0808 55ea4dd58128a45656c06f1d80680bc8 390 Gene3D G3DSA:3.40.1010.10 3 97 6.7E-11 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Afer_0808 55ea4dd58128a45656c06f1d80680bc8 390 SUPERFAMILY SSF53790 4 179 3.14E-25 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Afer_0808 55ea4dd58128a45656c06f1d80680bc8 390 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 177 3.3E-14 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Afer_1018 2f1b72495356761a88bdcc86400bfb45 312 Gene3D G3DSA:3.90.25.10 81 297 2.7E-71 T 14-10-2018 Afer_1018 2f1b72495356761a88bdcc86400bfb45 312 SUPERFAMILY SSF51735 8 305 1.88E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1018 2f1b72495356761a88bdcc86400bfb45 312 Gene3D G3DSA:3.40.50.720 10 289 2.7E-71 T 14-10-2018 Afer_1018 2f1b72495356761a88bdcc86400bfb45 312 Pfam PF01370 NAD dependent epimerase/dehydratase family 9 225 1.3E-48 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Afer_1996 0a9bc84fe68d43c5fd95ba2f132a5f25 240 SMART SM00450 64 180 1.8E-7 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1996 0a9bc84fe68d43c5fd95ba2f132a5f25 240 Gene3D G3DSA:3.40.250.10 84 190 1.9E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1996 0a9bc84fe68d43c5fd95ba2f132a5f25 240 SUPERFAMILY SSF52821 84 185 1.7E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1996 0a9bc84fe68d43c5fd95ba2f132a5f25 240 Pfam PF00581 Rhodanese-like domain 101 176 4.1E-5 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_0215 6893403827c70e6682812687cbb34088 294 SUPERFAMILY SSF53335 72 256 4.93E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0215 6893403827c70e6682812687cbb34088 294 PRINTS PR00996 Glutamate methyltransferase family signature 103 123 3.1E-29 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Afer_0215 6893403827c70e6682812687cbb34088 294 PRINTS PR00996 Glutamate methyltransferase family signature 224 247 3.1E-29 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Afer_0215 6893403827c70e6682812687cbb34088 294 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 3.1E-29 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Afer_0215 6893403827c70e6682812687cbb34088 294 PRINTS PR00996 Glutamate methyltransferase family signature 137 153 3.1E-29 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Afer_0215 6893403827c70e6682812687cbb34088 294 PRINTS PR00996 Glutamate methyltransferase family signature 26 39 3.1E-29 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Afer_0215 6893403827c70e6682812687cbb34088 294 PRINTS PR00996 Glutamate methyltransferase family signature 205 219 3.1E-29 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Afer_0215 6893403827c70e6682812687cbb34088 294 Gene3D G3DSA:3.40.50.150 70 268 2.1E-48 T 14-10-2018 Afer_0215 6893403827c70e6682812687cbb34088 294 SUPERFAMILY SSF47757 4 71 7.72E-6 T 14-10-2018 Afer_0215 6893403827c70e6682812687cbb34088 294 Pfam PF01739 CheR methyltransferase, SAM binding domain 72 255 6.5E-49 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal Afer_0215 6893403827c70e6682812687cbb34088 294 SMART SM00138 4 265 1.7E-57 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 79 114 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 Gene3D G3DSA:1.10.10.10 15 159 2.9E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 97 1.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 152 1.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 81 1.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 101 117 1.4E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 Pfam PF12802 MarR family 46 105 1.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 SUPERFAMILY SSF46785 16 155 1.08E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1721 f6919b5a1901673638c7e3957aa98de6 160 SMART SM00347 39 142 2.2E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1944 275825d8defdbf4e11d646866f67e538 186 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 186 19.752 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 Afer_1944 275825d8defdbf4e11d646866f67e538 186 SUPERFAMILY SSF53271 7 160 1.29E-21 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Afer_1944 275825d8defdbf4e11d646866f67e538 186 Gene3D G3DSA:3.40.50.2020 1 177 5.4E-35 T 14-10-2018 Afer_1117 b28feb13be82eb917e4b6447e63b7238 169 Pfam PF06146 Phosphate-starvation-inducible E 62 107 6.9E-6 T 14-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like Afer_0481 b726ceb3a7b6c11ef2d60b50ee189fe8 102 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 2 94 1.5E-16 T 14-10-2018 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-6279|MetaCyc: PWY-7591|MetaCyc: PWY-7938|MetaCyc: PWY-7939|MetaCyc: PWY-7947 Afer_0348 685b0104f72aebbf42e017e466cdb30f 77 Pfam PF11305 Protein of unknown function (DUF3107) 1 75 6.8E-23 T 14-10-2018 IPR021456 Protein of unknown function DUF3107 Afer_0741 d30eb7bfda617a4991bf308df9d2a3ea 321 Pfam PF01933 Uncharacterised protein family UPF0052 9 278 1.1E-43 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 Afer_0741 d30eb7bfda617a4991bf308df9d2a3ea 321 Hamap MF_01257 2-phospho-L-lactate transferase [cofD]. 1 321 93.521 T 14-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 Afer_0741 d30eb7bfda617a4991bf308df9d2a3ea 321 Gene3D G3DSA:1.10.8.240 43 130 7.0E-102 T 14-10-2018 Afer_0741 d30eb7bfda617a4991bf308df9d2a3ea 321 TIGRFAM TIGR01819 F420_cofD: 2-phospho-L-lactate transferase 9 313 3.1E-86 T 14-10-2018 IPR010115 2-phospho-L-lactate transferase GO:0000287|GO:0016780|GO:0051188 KEGG: 00680+2.7.8.28|MetaCyc: PWY-5198 Afer_0741 d30eb7bfda617a4991bf308df9d2a3ea 321 SUPERFAMILY SSF142338 9 317 1.31E-69 T 14-10-2018 Afer_0741 d30eb7bfda617a4991bf308df9d2a3ea 321 Gene3D G3DSA:3.40.50.10680 13 298 7.0E-102 T 14-10-2018 Afer_0711 c36bd41ee9c074433df2abbd94dfdc3d 231 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 10 198 1.0E-48 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Afer_0711 c36bd41ee9c074433df2abbd94dfdc3d 231 Pfam PF02581 Thiamine monophosphate synthase 11 186 3.1E-45 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Afer_0711 c36bd41ee9c074433df2abbd94dfdc3d 231 Gene3D G3DSA:3.20.20.70 3 206 4.7E-55 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0711 c36bd41ee9c074433df2abbd94dfdc3d 231 SUPERFAMILY SSF51391 10 203 3.79E-50 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Afer_0711 c36bd41ee9c074433df2abbd94dfdc3d 231 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 204 23.274 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Afer_1925 9a34f7358b647f25d4d0cc6c1096a165 273 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 192 9.9E-24 T 14-10-2018 Afer_1925 9a34f7358b647f25d4d0cc6c1096a165 273 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 190 1.3E-28 T 14-10-2018 Afer_1925 9a34f7358b647f25d4d0cc6c1096a165 273 Gene3D G3DSA:1.20.1440.100 15 90 4.0E-63 T 14-10-2018 Afer_1925 9a34f7358b647f25d4d0cc6c1096a165 273 Gene3D G3DSA:3.40.50.1000 4 216 4.0E-63 T 14-10-2018 IPR023214 HAD superfamily Afer_1925 9a34f7358b647f25d4d0cc6c1096a165 273 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 202 3.2E-54 T 14-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like Afer_1925 9a34f7358b647f25d4d0cc6c1096a165 273 SUPERFAMILY SSF56784 2 215 2.07E-29 T 14-10-2018 IPR036412 HAD-like superfamily Afer_2034 c78d7ea8651b18d2455508abe528257b 281 Gene3D G3DSA:3.30.1370.50 199 277 5.9E-21 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 Afer_2034 c78d7ea8651b18d2455508abe528257b 281 Gene3D G3DSA:3.30.300.20 115 198 1.8E-15 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Afer_2034 c78d7ea8651b18d2455508abe528257b 281 SMART SM01245 5 56 1.5E-17 T 14-10-2018 IPR032782 Jag, N-terminal Afer_2034 c78d7ea8651b18d2455508abe528257b 281 Pfam PF01424 R3H domain 204 262 1.3E-12 T 14-10-2018 IPR001374 R3H domain GO:0003676 Afer_2034 c78d7ea8651b18d2455508abe528257b 281 SMART SM00393 184 263 1.4E-16 T 14-10-2018 IPR001374 R3H domain GO:0003676 Afer_2034 c78d7ea8651b18d2455508abe528257b 281 Pfam PF14804 Jag N-terminus 7 54 1.8E-16 T 14-10-2018 IPR032782 Jag, N-terminal Afer_2034 c78d7ea8651b18d2455508abe528257b 281 Gene3D G3DSA:3.30.30.80 1 56 2.7E-15 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily Afer_2034 c78d7ea8651b18d2455508abe528257b 281 SUPERFAMILY SSF82708 218 262 2.55E-9 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 Afer_0917 b8ad8249b67cb0ced74064b45b21cbd3 258 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 19 236 4.2E-54 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Afer_0917 b8ad8249b67cb0ced74064b45b21cbd3 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 17 44 1.5E-33 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Afer_0917 b8ad8249b67cb0ced74064b45b21cbd3 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 113 139 1.5E-33 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Afer_0917 b8ad8249b67cb0ced74064b45b21cbd3 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 95 113 1.5E-33 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Afer_0917 b8ad8249b67cb0ced74064b45b21cbd3 258 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 163 191 1.5E-33 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Afer_0917 b8ad8249b67cb0ced74064b45b21cbd3 258 Pfam PF00902 Sec-independent protein translocase protein (TatC) 20 231 1.7E-56 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Afer_0917 b8ad8249b67cb0ced74064b45b21cbd3 258 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 8 248 14.605 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 Afer_0996 ef396200dd46f35b7825992ac64fb5cd 298 SUPERFAMILY SSF53613 1 288 1.01E-51 T 14-10-2018 IPR029056 Ribokinase-like Afer_0996 ef396200dd46f35b7825992ac64fb5cd 298 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 21 45 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Afer_0996 ef396200dd46f35b7825992ac64fb5cd 298 Gene3D G3DSA:3.40.1190.20 1 291 2.9E-58 T 14-10-2018 IPR029056 Ribokinase-like Afer_0996 ef396200dd46f35b7825992ac64fb5cd 298 Pfam PF00294 pfkB family carbohydrate kinase 14 287 6.6E-44 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Afer_0962 d72ff3771bc03f5d78d23af5546ce937 92 Gene3D G3DSA:3.30.110.40 17 92 1.4E-28 T 14-10-2018 IPR036868 TusA-like domain superfamily Afer_0962 d72ff3771bc03f5d78d23af5546ce937 92 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 23 47 - T 14-10-2018 IPR001455 TusA-like domain Afer_0962 d72ff3771bc03f5d78d23af5546ce937 92 Pfam PF01206 Sulfurtransferase TusA 22 90 3.2E-21 T 14-10-2018 IPR001455 TusA-like domain Afer_0962 d72ff3771bc03f5d78d23af5546ce937 92 SUPERFAMILY SSF64307 17 90 9.94E-23 T 14-10-2018 IPR036868 TusA-like domain superfamily Afer_1474 91a4f0f471fc0e018e9e44ffe294c0d6 363 Pfam PF02222 ATP-grasp domain 129 268 2.1E-36 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type Afer_1474 91a4f0f471fc0e018e9e44ffe294c0d6 363 SUPERFAMILY SSF56059 100 288 9.43E-48 T 14-10-2018 Afer_1474 91a4f0f471fc0e018e9e44ffe294c0d6 363 SUPERFAMILY SSF51246 292 350 8.63E-13 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 Afer_1474 91a4f0f471fc0e018e9e44ffe294c0d6 363 SUPERFAMILY SSF52440 3 95 1.01E-12 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Afer_1474 91a4f0f471fc0e018e9e44ffe294c0d6 363 Gene3D G3DSA:3.40.50.20 1 104 9.1E-19 T 14-10-2018 Afer_1474 91a4f0f471fc0e018e9e44ffe294c0d6 363 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 4 337 33.061 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 Afer_1474 91a4f0f471fc0e018e9e44ffe294c0d6 363 Gene3D G3DSA:3.30.470.20 166 355 2.1E-65 T 14-10-2018 Afer_1474 91a4f0f471fc0e018e9e44ffe294c0d6 363 Gene3D G3DSA:3.30.1490.20 105 165 4.0E-5 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 Pfam PF00701 Dihydrodipicolinate synthetase family 11 278 2.4E-76 T 14-10-2018 IPR002220 DapA-like GO:0016829 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 SUPERFAMILY SSF51569 11 294 6.38E-82 T 14-10-2018 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 Gene3D G3DSA:3.20.20.70 2 296 1.3E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 SMART SM01130 6 295 1.9E-101 T 14-10-2018 IPR002220 DapA-like GO:0016829 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 293 51.075 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 PIRSF PIRSF001365 7 306 4.8E-79 T 14-10-2018 IPR002220 DapA-like GO:0016829 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 4.0E-27 T 14-10-2018 IPR002220 DapA-like GO:0016829 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 4.0E-27 T 14-10-2018 IPR002220 DapA-like GO:0016829 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 4.0E-27 T 14-10-2018 IPR002220 DapA-like GO:0016829 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 4.0E-27 T 14-10-2018 IPR002220 DapA-like GO:0016829 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 11 293 3.7E-79 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0646 269c5ed3582518e9b0444e6607eebf0c 309 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 Afer_1463 c0dba67439226764adcec4e6a1e5b343 352 SUPERFAMILY SSF53383 9 342 5.61E-53 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1463 c0dba67439226764adcec4e6a1e5b343 352 Pfam PF00266 Aminotransferase class-V 38 286 3.7E-28 T 14-10-2018 IPR000192 Aminotransferase class V domain Afer_1463 c0dba67439226764adcec4e6a1e5b343 352 Gene3D G3DSA:3.40.640.10 23 270 9.1E-57 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1463 c0dba67439226764adcec4e6a1e5b343 352 Gene3D G3DSA:3.90.1150.10 13 337 9.1E-57 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0414 b79669233ea238bd8b2a6ad32111bba0 119 Gene3D G3DSA:3.30.420.100 4 119 2.0E-42 T 14-10-2018 Afer_0414 b79669233ea238bd8b2a6ad32111bba0 119 SUPERFAMILY SSF53137 6 117 1.22E-47 T 14-10-2018 Afer_0414 b79669233ea238bd8b2a6ad32111bba0 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 5 119 29.769 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0414 b79669233ea238bd8b2a6ad32111bba0 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 6 119 1.7E-43 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0414 b79669233ea238bd8b2a6ad32111bba0 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 5 119 1.5E-48 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1874 deefdea6f5ca8454d2cb968c88e2efb1 221 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 13 191 2.3E-31 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Afer_1874 deefdea6f5ca8454d2cb968c88e2efb1 221 SMART SM01007 13 194 1.8E-30 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal Afer_1874 deefdea6f5ca8454d2cb968c88e2efb1 221 Gene3D G3DSA:3.40.225.10 3 220 1.1E-44 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Afer_1874 deefdea6f5ca8454d2cb968c88e2efb1 221 SUPERFAMILY SSF53639 12 212 3.53E-35 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily Afer_0971 a37ea9df7d837696ccb2b602896c7d97 723 Pfam PF02665 Nitrate reductase gamma subunit 150 296 3.4E-7 T 14-10-2018 IPR023234 NarG-like domain Afer_0971 a37ea9df7d837696ccb2b602896c7d97 723 Pfam PF13183 4Fe-4S dicluster domain 321 411 9.3E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_0971 a37ea9df7d837696ccb2b602896c7d97 723 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 397 408 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_0971 a37ea9df7d837696ccb2b602896c7d97 723 Pfam PF02754 Cysteine-rich domain 599 681 3.0E-11 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_0971 a37ea9df7d837696ccb2b602896c7d97 723 Pfam PF02754 Cysteine-rich domain 489 561 0.04 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_0971 a37ea9df7d837696ccb2b602896c7d97 723 SUPERFAMILY SSF103501 20 296 2.62E-31 T 14-10-2018 IPR036197 NarG-like superfamily Afer_0971 a37ea9df7d837696ccb2b602896c7d97 723 SUPERFAMILY SSF46548 316 426 5.41E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0971 a37ea9df7d837696ccb2b602896c7d97 723 Gene3D G3DSA:1.20.950.20 90 289 3.1E-5 T 14-10-2018 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 180 202 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 Gene3D G3DSA:3.40.50.720 1 335 1.7E-127 T 14-10-2018 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 PIRSF PIRSF000098 1 425 6.0E-137 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 SUPERFAMILY SSF51735 1 155 7.71E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 Pfam PF01842 ACT domain 350 409 3.6E-9 T 14-10-2018 IPR002912 ACT domain Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 Gene3D G3DSA:3.30.360.10 133 342 1.7E-127 T 14-10-2018 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 Gene3D G3DSA:3.30.70.260 343 409 1.7E-127 T 14-10-2018 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 SUPERFAMILY SSF55021 347 416 5.73E-11 T 14-10-2018 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 SUPERFAMILY SSF55347 134 303 1.05E-44 T 14-10-2018 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 Pfam PF00742 Homoserine dehydrogenase 134 316 7.1E-59 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 Afer_1813 a2b1a4c22116a16525b660bc8d9b1721 425 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 126 7.7E-19 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 Pfam PF00117 Glutamine amidotransferase class-I 11 194 6.0E-33 T 14-10-2018 IPR017926 Glutamine amidotransferase Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 Gene3D G3DSA:3.40.50.880 2 198 1.7E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 SUPERFAMILY SSF52402 188 437 5.07E-53 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-5 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-5 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-5 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 Gene3D G3DSA:3.40.50.620 203 396 1.5E-71 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 198 2.2E-63 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00097 Anthranilate synthase component II signature 80 91 4.5E-5 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00097 Anthranilate synthase component II signature 53 62 4.5E-5 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00097 Anthranilate synthase component II signature 171 184 4.5E-5 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 207 517 3.3E-148 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 SUPERFAMILY SSF54810 396 517 6.15E-48 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 Gene3D G3DSA:3.30.300.10 397 517 4.9E-53 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 SUPERFAMILY SSF52317 8 231 3.15E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 2.7E-7 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 171 184 2.7E-7 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 2.7E-7 T 14-10-2018 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 Pfam PF00958 GMP synthase C terminal domain 424 516 5.3E-42 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 Afer_0460 faf999f0a76dbcb4da25abfcbeab28bb 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 517 51.791 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 150 249 5.0E-22 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 369 442 6.1E-12 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 Gene3D G3DSA:3.40.120.10 247 364 2.9E-34 T 14-10-2018 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 255 364 7.2E-24 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 SUPERFAMILY SSF53738 255 360 5.49E-29 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 SUPERFAMILY SSF53738 150 250 3.92E-26 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 SUPERFAMILY SSF55957 364 445 8.55E-19 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 245 2.7E-19 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 88 102 2.7E-19 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 167 186 2.7E-19 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 201 214 2.7E-19 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 129 3.6E-34 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 Gene3D G3DSA:3.40.120.10 169 246 1.8E-27 T 14-10-2018 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 Gene3D G3DSA:3.30.310.50 365 444 2.4E-25 T 14-10-2018 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 Gene3D G3DSA:3.40.120.10 2 142 3.8E-49 T 14-10-2018 Afer_1768 3a4f129d5607675bf3a484fa277acfe8 451 SUPERFAMILY SSF53738 4 118 3.1E-35 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1173 a462badd6e28f0cbcee54fbc588c562e 232 Pfam PF00072 Response regulator receiver domain 4 112 9.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1173 a462badd6e28f0cbcee54fbc588c562e 232 SMART SM00448 2 112 2.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_1173 a462badd6e28f0cbcee54fbc588c562e 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 220 6.8E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_1173 a462badd6e28f0cbcee54fbc588c562e 232 SMART SM00862 150 222 1.2E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_1173 a462badd6e28f0cbcee54fbc588c562e 232 Gene3D G3DSA:1.10.10.10 127 227 4.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1173 a462badd6e28f0cbcee54fbc588c562e 232 SUPERFAMILY SSF46894 131 222 5.1E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_1173 a462badd6e28f0cbcee54fbc588c562e 232 Gene3D G3DSA:3.40.50.2300 2 124 6.3E-29 T 14-10-2018 Afer_1173 a462badd6e28f0cbcee54fbc588c562e 232 SUPERFAMILY SSF52172 3 131 3.84E-33 T 14-10-2018 IPR011006 CheY-like superfamily Afer_1076 d13585153ded1ca5b90755ce9ea2ad6e 272 Gene3D G3DSA:3.40.50.300 1 258 4.4E-55 T 14-10-2018 Afer_1076 d13585153ded1ca5b90755ce9ea2ad6e 272 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1076 d13585153ded1ca5b90755ce9ea2ad6e 272 Pfam PF00005 ABC transporter 22 174 7.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1076 d13585153ded1ca5b90755ce9ea2ad6e 272 SMART SM00382 31 238 2.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1076 d13585153ded1ca5b90755ce9ea2ad6e 272 SUPERFAMILY SSF52540 11 224 3.2E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1257 17d0e42ab73d978bbeefe7f61bb53b0b 414 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 93 104 1.8E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Afer_1257 17d0e42ab73d978bbeefe7f61bb53b0b 414 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 153 170 1.8E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Afer_1257 17d0e42ab73d978bbeefe7f61bb53b0b 414 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 180 193 1.8E-12 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 Afer_1257 17d0e42ab73d978bbeefe7f61bb53b0b 414 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 83 271 9.4E-28 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 Afer_1257 17d0e42ab73d978bbeefe7f61bb53b0b 414 SUPERFAMILY SSF56601 56 296 2.82E-33 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Afer_1257 17d0e42ab73d978bbeefe7f61bb53b0b 414 Gene3D G3DSA:3.40.710.10 44 335 2.0E-47 T 14-10-2018 Afer_0987 5f940a3d7f1ee670a0d543d0313f1a9e 190 Pfam PF09485 CRISPR-associated protein Cse2 (CRISPR_cse2) 27 174 7.7E-35 T 14-10-2018 IPR013382 CRISPR-associated protein Cse2 Afer_0987 5f940a3d7f1ee670a0d543d0313f1a9e 190 TIGRFAM TIGR02548 casB_cse2: CRISPR type I-E/ECOLI-associated protein CasB/Cse2 22 174 6.3E-27 T 14-10-2018 IPR013382 CRISPR-associated protein Cse2 Afer_0987 5f940a3d7f1ee670a0d543d0313f1a9e 190 Gene3D G3DSA:1.10.520.40 3 175 4.2E-44 T 14-10-2018 IPR038287 Cse2 superfamily Afer_1467 663d89a4a69e3b2454054c3f59394148 475 Gene3D G3DSA:3.30.420.10 12 183 1.7E-40 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1467 663d89a4a69e3b2454054c3f59394148 475 SUPERFAMILY SSF82771 215 287 4.32E-9 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Afer_1467 663d89a4a69e3b2454054c3f59394148 475 SMART SM00479 17 183 1.5E-35 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Afer_1467 663d89a4a69e3b2454054c3f59394148 475 Pfam PF02151 UvrB/uvrC motif 339 366 1.6E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 Afer_1467 663d89a4a69e3b2454054c3f59394148 475 SUPERFAMILY SSF46600 335 367 5.23E-6 T 14-10-2018 IPR036876 UVR domain superfamily Afer_1467 663d89a4a69e3b2454054c3f59394148 475 SUPERFAMILY SSF53098 14 195 4.5E-45 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1467 663d89a4a69e3b2454054c3f59394148 475 SMART SM00465 215 294 1.9E-6 T 14-10-2018 IPR000305 GIY-YIG endonuclease Afer_1467 663d89a4a69e3b2454054c3f59394148 475 Gene3D G3DSA:3.40.1440.10 202 295 9.1E-17 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 Afer_1467 663d89a4a69e3b2454054c3f59394148 475 Pfam PF00929 Exonuclease 20 174 3.5E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III Afer_1644 439a89c3090d87f2f63a596dbf7aeba7 155 SUPERFAMILY SSF55620 16 126 3.04E-22 T 14-10-2018 Afer_1644 439a89c3090d87f2f63a596dbf7aeba7 155 Gene3D G3DSA:3.30.1130.10 19 147 2.2E-43 T 14-10-2018 Afer_1644 439a89c3090d87f2f63a596dbf7aeba7 155 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 155 43.048 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Afer_1644 439a89c3090d87f2f63a596dbf7aeba7 155 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 24 129 1.3E-40 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Afer_1644 439a89c3090d87f2f63a596dbf7aeba7 155 Pfam PF14489 QueF-like protein 58 132 1.5E-28 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 Afer_0919 cecb2fb11776347bf0cfda84551603d5 532 Gene3D G3DSA:3.30.1360.170 401 493 3.9E-9 T 14-10-2018 Afer_0919 cecb2fb11776347bf0cfda84551603d5 532 SUPERFAMILY SSF69796 352 504 2.75E-19 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Afer_0919 cecb2fb11776347bf0cfda84551603d5 532 Gene3D G3DSA:3.30.1360.170 21 264 4.6E-29 T 14-10-2018 Afer_0919 cecb2fb11776347bf0cfda84551603d5 532 Pfam PF02511 Thymidylate synthase complementing protein 37 252 2.8E-20 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Afer_0919 cecb2fb11776347bf0cfda84551603d5 532 Pfam PF02511 Thymidylate synthase complementing protein 435 487 3.3E-7 T 14-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Afer_0919 cecb2fb11776347bf0cfda84551603d5 532 SUPERFAMILY SSF69796 73 263 7.85E-18 T 14-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 Afer_0182 2efb91d21bde5e46278d76fdcfb0d940 323 Pfam PF00990 Diguanylate cyclase, GGDEF domain 178 277 9.6E-24 T 14-10-2018 IPR000160 GGDEF domain Afer_0182 2efb91d21bde5e46278d76fdcfb0d940 323 SMART SM00267 167 321 7.4E-22 T 14-10-2018 IPR000160 GGDEF domain Afer_0182 2efb91d21bde5e46278d76fdcfb0d940 323 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 176 315 1.1E-22 T 14-10-2018 IPR000160 GGDEF domain Afer_0182 2efb91d21bde5e46278d76fdcfb0d940 323 SUPERFAMILY SSF55073 183 316 4.24E-28 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_0182 2efb91d21bde5e46278d76fdcfb0d940 323 Gene3D G3DSA:3.30.70.270 164 318 6.4E-32 T 14-10-2018 Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 292 1.4E-71 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 305 1.4E-135 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 SUPERFAMILY SSF53686 2 306 1.02E-107 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 Gene3D G3DSA:3.40.50.1100 10 300 5.5E-127 T 14-10-2018 Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 Gene3D G3DSA:3.40.50.1100 45 146 5.5E-127 T 14-10-2018 Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 305 4.0E-141 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 254 270 2.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 179 2.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 112 129 2.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1336 9586a8d684961ffa798e97af843ccfa9 311 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 Afer_1327 da0b98f7d82a7f581b81d1bb373d57e5 388 Pfam PF00005 ABC transporter 21 162 2.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1327 da0b98f7d82a7f581b81d1bb373d57e5 388 Gene3D G3DSA:2.40.50.140 292 371 2.1E-26 T 14-10-2018 Afer_1327 da0b98f7d82a7f581b81d1bb373d57e5 388 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1327 da0b98f7d82a7f581b81d1bb373d57e5 388 SUPERFAMILY SSF50331 237 386 1.82E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal Afer_1327 da0b98f7d82a7f581b81d1bb373d57e5 388 SMART SM00382 29 212 7.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1327 da0b98f7d82a7f581b81d1bb373d57e5 388 Gene3D G3DSA:2.40.50.940 223 380 2.1E-26 T 14-10-2018 Afer_1327 da0b98f7d82a7f581b81d1bb373d57e5 388 Gene3D G3DSA:3.40.50.300 3 222 6.4E-63 T 14-10-2018 Afer_1327 da0b98f7d82a7f581b81d1bb373d57e5 388 SUPERFAMILY SSF52540 4 243 5.32E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1853 6b0f4939814d6c8720f314905af10a84 335 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 7 335 4.7E-112 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_1853 6b0f4939814d6c8720f314905af10a84 335 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 22 33 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_1853 6b0f4939814d6c8720f314905af10a84 335 Pfam PF04055 Radical SAM superfamily 20 186 7.9E-28 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_1853 6b0f4939814d6c8720f314905af10a84 335 SMART SM00729 16 225 1.1E-9 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_1853 6b0f4939814d6c8720f314905af10a84 335 Pfam PF13353 4Fe-4S single cluster domain 24 128 4.4E-8 T 14-10-2018 Afer_1853 6b0f4939814d6c8720f314905af10a84 335 SUPERFAMILY SSF102114 6 283 1.83E-71 T 14-10-2018 Afer_1853 6b0f4939814d6c8720f314905af10a84 335 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 7 335 39.784 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_1853 6b0f4939814d6c8720f314905af10a84 335 Pfam PF06463 Molybdenum Cofactor Synthesis C 192 317 4.4E-35 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 Afer_1853 6b0f4939814d6c8720f314905af10a84 335 Gene3D G3DSA:3.20.20.70 4 335 6.6E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1718 7d28283ce4d6959ac98ec43d595f2eeb 392 SUPERFAMILY SSF103263 1 378 1.05E-122 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Afer_1718 7d28283ce4d6959ac98ec43d595f2eeb 392 Gene3D G3DSA:3.60.150.10 1 387 7.8E-140 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Afer_1718 7d28283ce4d6959ac98ec43d595f2eeb 392 ProSitePatterns PS00788 Chorismate synthase signature 2. 127 143 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Afer_1718 7d28283ce4d6959ac98ec43d595f2eeb 392 Pfam PF01264 Chorismate synthase 2 358 1.2E-108 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Afer_1718 7d28283ce4d6959ac98ec43d595f2eeb 392 PIRSF PIRSF001456 1 377 6.3E-115 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Afer_1718 7d28283ce4d6959ac98ec43d595f2eeb 392 TIGRFAM TIGR00033 aroC: chorismate synthase 2 363 8.2E-113 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Afer_1718 7d28283ce4d6959ac98ec43d595f2eeb 392 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Afer_1718 7d28283ce4d6959ac98ec43d595f2eeb 392 Hamap MF_00300 Chorismate synthase [aroC]. 2 365 33.219 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 Afer_1360 bb463294ac8de4c8596ae139e2f3a7ee 419 Pfam PF02754 Cysteine-rich domain 182 264 3.4E-7 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_1360 bb463294ac8de4c8596ae139e2f3a7ee 419 Pfam PF02754 Cysteine-rich domain 304 388 2.1E-12 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_1360 bb463294ac8de4c8596ae139e2f3a7ee 419 SUPERFAMILY SSF54862 16 97 1.17E-19 T 14-10-2018 Afer_1360 bb463294ac8de4c8596ae139e2f3a7ee 419 Pfam PF12838 4Fe-4S dicluster domain 18 85 2.8E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_1360 bb463294ac8de4c8596ae139e2f3a7ee 419 PIRSF PIRSF000139 2 413 1.8E-93 T 14-10-2018 Afer_1360 bb463294ac8de4c8596ae139e2f3a7ee 419 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 71 82 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_1360 bb463294ac8de4c8596ae139e2f3a7ee 419 Gene3D G3DSA:3.30.70.3270 2 94 3.3E-10 T 14-10-2018 Afer_1041 b219c6b0ea6a3c8ccd6ff7ab79e085fc 458 SUPERFAMILY SSF51395 50 415 3.98E-92 T 14-10-2018 Afer_1041 b219c6b0ea6a3c8ccd6ff7ab79e085fc 458 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 314 320 - T 14-10-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Afer_1041 b219c6b0ea6a3c8ccd6ff7ab79e085fc 458 Gene3D G3DSA:3.20.20.70 48 424 2.4E-125 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1041 b219c6b0ea6a3c8ccd6ff7ab79e085fc 458 PIRSF PIRSF000138 35 421 1.6E-120 T 14-10-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 Reactome: R-HSA-9033241 Afer_1041 b219c6b0ea6a3c8ccd6ff7ab79e085fc 458 Pfam PF01070 FMN-dependent dehydrogenase 58 417 8.9E-124 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 Afer_0354 70154c98ed3d6e1ad93fd40f29833ab4 322 PIRSF PIRSF000089 1 320 6.0E-86 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Afer_0354 70154c98ed3d6e1ad93fd40f29833ab4 322 Gene3D G3DSA:3.40.50.1220 193 322 8.6E-54 T 14-10-2018 Afer_0354 70154c98ed3d6e1ad93fd40f29833ab4 322 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 196 277 8.5E-35 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Afer_0354 70154c98ed3d6e1ad93fd40f29833ab4 322 SUPERFAMILY SSF52467 195 314 1.8E-45 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Afer_0354 70154c98ed3d6e1ad93fd40f29833ab4 322 Pfam PF01012 Electron transfer flavoprotein domain 5 174 2.2E-17 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Afer_0354 70154c98ed3d6e1ad93fd40f29833ab4 322 SMART SM00893 4 184 4.8E-14 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Afer_0354 70154c98ed3d6e1ad93fd40f29833ab4 322 Gene3D G3DSA:3.40.50.620 3 192 9.7E-26 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0354 70154c98ed3d6e1ad93fd40f29833ab4 322 SUPERFAMILY SSF52402 4 180 8.37E-23 T 14-10-2018 Afer_1235 1df4a51a782347078553a9b0bc008cc0 278 Gene3D G3DSA:3.20.20.150 1 276 3.3E-66 T 14-10-2018 Afer_1235 1df4a51a782347078553a9b0bc008cc0 278 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 66 74 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 Afer_1235 1df4a51a782347078553a9b0bc008cc0 278 Pfam PF01261 Xylose isomerase-like TIM barrel 22 230 9.6E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain Afer_1235 1df4a51a782347078553a9b0bc008cc0 278 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 269 5.8E-49 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Afer_1235 1df4a51a782347078553a9b0bc008cc0 278 SUPERFAMILY SSF51658 2 267 1.83E-55 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily Afer_1235 1df4a51a782347078553a9b0bc008cc0 278 SMART SM00518 2 272 1.8E-50 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 Afer_1750 5641bfee239b4123d4df807c3dca18a0 188 Gene3D G3DSA:3.90.950.10 1 188 8.5E-55 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Afer_1750 5641bfee239b4123d4df807c3dca18a0 188 SUPERFAMILY SSF52972 3 179 2.62E-49 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like Afer_1750 5641bfee239b4123d4df807c3dca18a0 188 Hamap MF_01405 dITP/XTP pyrophosphatase. 1 182 39.649 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 Afer_1750 5641bfee239b4123d4df807c3dca18a0 188 Pfam PF01725 Ham1 family 5 179 6.2E-51 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Afer_1750 5641bfee239b4123d4df807c3dca18a0 188 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 179 2.5E-51 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 Afer_0259 a0fa76c5e4ae5a84e354faabe2504492 167 TIGRFAM TIGR03847 TIGR03847: conserved hypothetical protein 5 160 1.4E-36 T 14-10-2018 IPR021441 Protein of unknown function DUF3090 Afer_0259 a0fa76c5e4ae5a84e354faabe2504492 167 Pfam PF11290 Protein of unknown function (DUF3090) 7 156 3.4E-36 T 14-10-2018 IPR021441 Protein of unknown function DUF3090 Afer_2035 777021e91c3af775e1641d9a7202c5af 336 Pfam PF02096 60Kd inner membrane protein 32 251 3.0E-40 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 Afer_2035 777021e91c3af775e1641d9a7202c5af 336 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 31 251 1.2E-42 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1062 f3f59092a6c9349df3a14ac095375017 423 Gene3D G3DSA:1.20.1250.20 36 406 5.8E-26 T 14-10-2018 Afer_1062 f3f59092a6c9349df3a14ac095375017 423 Pfam PF07690 Major Facilitator Superfamily 40 283 3.8E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1062 f3f59092a6c9349df3a14ac095375017 423 SUPERFAMILY SSF103473 39 409 2.75E-27 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1400 880585a17ceb6adf7e142df494168225 364 SUPERFAMILY SSF159774 64 359 5.62E-70 T 14-10-2018 IPR023158 YerB-like superfamily Afer_1400 880585a17ceb6adf7e142df494168225 364 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 67 203 3.4E-32 T 14-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal Afer_1400 880585a17ceb6adf7e142df494168225 364 Gene3D G3DSA:3.50.90.10 54 364 6.0E-68 T 14-10-2018 IPR023158 YerB-like superfamily Afer_1400 880585a17ceb6adf7e142df494168225 364 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 232 348 7.7E-21 T 14-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 Gene3D G3DSA:3.40.50.1980 34 232 2.1E-97 T 14-10-2018 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 Pfam PF00815 Histidinol dehydrogenase 33 427 2.7E-132 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 7.7E-68 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PRINTS PR00083 Histidinol dehydrogenase signature 362 380 7.7E-68 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PRINTS PR00083 Histidinol dehydrogenase signature 170 196 7.7E-68 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PRINTS PR00083 Histidinol dehydrogenase signature 135 161 7.7E-68 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PRINTS PR00083 Histidinol dehydrogenase signature 321 346 7.7E-68 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PRINTS PR00083 Histidinol dehydrogenase signature 200 225 7.7E-68 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PRINTS PR00083 Histidinol dehydrogenase signature 35 59 7.7E-68 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 7.7E-68 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 PIRSF PIRSF000099 15 431 1.5E-133 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 Gene3D G3DSA:3.40.50.1980 234 350 2.1E-97 T 14-10-2018 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 SUPERFAMILY SSF53720 32 428 8.04E-67 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 428 34.43 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_1111 d3bbcd2e0434b3688182429a6087a6e8 432 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 427 5.2E-130 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 Afer_0253 37424de1d5016e602d808bd324c72e8d 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 8 423 86.118 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 Afer_0253 37424de1d5016e602d808bd324c72e8d 430 Gene3D G3DSA:3.40.640.10 74 315 1.6E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0253 37424de1d5016e602d808bd324c72e8d 430 SUPERFAMILY SSF53383 8 419 4.13E-112 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0253 37424de1d5016e602d808bd324c72e8d 430 Gene3D G3DSA:3.90.1150.10 12 414 1.6E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0253 37424de1d5016e602d808bd324c72e8d 430 Pfam PF00202 Aminotransferase class-III 37 416 3.9E-69 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1368 bd8d15c5e943d870d11d290dd7bb3df3 107 SUPERFAMILY SSF117782 1 103 1.31E-32 T 14-10-2018 IPR035439 UPF0145 domain superfamily Afer_1368 bd8d15c5e943d870d11d290dd7bb3df3 107 Pfam PF01906 Putative heavy-metal-binding 1 103 1.6E-34 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 Afer_1368 bd8d15c5e943d870d11d290dd7bb3df3 107 Gene3D G3DSA:3.30.110.70 1 107 4.5E-28 T 14-10-2018 Afer_1368 bd8d15c5e943d870d11d290dd7bb3df3 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 21.071 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 Afer_1175 617f4ec3421f3ee3b55cf274d451039e 389 SUPERFAMILY SSF52402 253 366 2.09E-14 T 14-10-2018 Afer_1175 617f4ec3421f3ee3b55cf274d451039e 389 Pfam PF00582 Universal stress protein family 255 365 2.1E-11 T 14-10-2018 IPR006016 UspA Afer_1175 617f4ec3421f3ee3b55cf274d451039e 389 Gene3D G3DSA:3.40.50.620 247 373 7.6E-10 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1175 617f4ec3421f3ee3b55cf274d451039e 389 Gene3D G3DSA:3.40.50.300 19 229 4.1E-85 T 14-10-2018 Afer_1175 617f4ec3421f3ee3b55cf274d451039e 389 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 22 228 7.6E-85 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 SMART SM00738 65 173 2.5E-51 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 Gene3D G3DSA:3.30.70.940 63 181 2.9E-42 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 SUPERFAMILY SSF82679 67 173 4.05E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 ProSitePatterns PS01014 Transcription termination factor nusG signature. 226 235 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 SUPERFAMILY SSF50104 188 242 9.78E-17 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 SMART SM00739 189 216 2.5E-4 T 14-10-2018 IPR005824 KOW Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 68 242 4.6E-63 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 PRINTS PR00338 Transcription termination factor NUSG signature 120 132 3.7E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 PRINTS PR00338 Transcription termination factor NUSG signature 219 235 3.7E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 PRINTS PR00338 Transcription termination factor NUSG signature 201 216 3.7E-18 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 Pfam PF02357 Transcription termination factor nusG 67 169 2.2E-28 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 Gene3D G3DSA:2.30.30.30 184 242 1.4E-21 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 Afer_0386 868e550dd498c00a5308c3fe705e4d98 243 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 65 243 25.176 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 Afer_1429 c1dd0221260b9c5ea9375614643f20a8 303 SMART SM00563 79 197 9.0E-25 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Afer_1429 c1dd0221260b9c5ea9375614643f20a8 303 Pfam PF01553 Acyltransferase 76 194 3.4E-18 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 Afer_1429 c1dd0221260b9c5ea9375614643f20a8 303 SUPERFAMILY SSF69593 74 238 5.62E-31 T 14-10-2018 Afer_0142 8bab8d81f9a0ce2b413692e468c051e2 370 Pfam PF01464 Transglycosylase SLT domain 243 338 2.5E-24 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 Afer_0142 8bab8d81f9a0ce2b413692e468c051e2 370 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 260 288 - T 14-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 Afer_0142 8bab8d81f9a0ce2b413692e468c051e2 370 Pfam PF00877 NlpC/P60 family 121 211 5.9E-24 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain Afer_0142 8bab8d81f9a0ce2b413692e468c051e2 370 SUPERFAMILY SSF53955 224 356 1.07E-37 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily Afer_0142 8bab8d81f9a0ce2b413692e468c051e2 370 SUPERFAMILY SSF54001 109 212 1.42E-35 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Afer_0142 8bab8d81f9a0ce2b413692e468c051e2 370 Gene3D G3DSA:1.10.530.10 216 357 1.2E-37 T 14-10-2018 Afer_0142 8bab8d81f9a0ce2b413692e468c051e2 370 Gene3D G3DSA:3.90.1720.10 5 215 7.3E-42 T 14-10-2018 Afer_0973 345eb3f47089e7bac66d422842e3e171 144 Pfam PF01597 Glycine cleavage H-protein 15 125 1.0E-35 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Afer_0973 345eb3f47089e7bac66d422842e3e171 144 SUPERFAMILY SSF51230 10 116 1.31E-32 T 14-10-2018 IPR011053 Single hybrid motif Afer_0973 345eb3f47089e7bac66d422842e3e171 144 Gene3D G3DSA:2.40.50.100 7 139 1.1E-34 T 14-10-2018 Afer_0973 345eb3f47089e7bac66d422842e3e171 144 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 10 137 31.405 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 Afer_0973 345eb3f47089e7bac66d422842e3e171 144 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 54 83 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 108 300 5.2E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 Gene3D G3DSA:3.40.50.970 60 478 3.1E-121 T 14-10-2018 Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 SUPERFAMILY SSF52922 718 911 2.62E-35 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 Gene3D G3DSA:3.40.50.970 479 712 2.5E-94 T 14-10-2018 Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 SUPERFAMILY SSF52518 61 473 6.51E-122 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 SUPERFAMILY SSF52518 480 707 1.65E-81 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 PIRSF PIRSF000156 2 912 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 10 911 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 Afer_0713 f6e332abbd7ea109ea0d433abbdff3f6 912 Gene3D G3DSA:3.40.50.920 719 912 1.9E-51 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 SUPERFAMILY SSF88946 38 173 1.73E-47 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 PRINTS PR00046 Major sigma-70 factor signature 151 159 1.8E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 PRINTS PR00046 Major sigma-70 factor signature 127 140 1.8E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 PRINTS PR00046 Major sigma-70 factor signature 311 322 1.8E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 PRINTS PR00046 Major sigma-70 factor signature 275 287 1.8E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 PRINTS PR00046 Major sigma-70 factor signature 296 311 1.8E-28 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 Gene3D G3DSA:1.10.10.10 176 251 1.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 127 140 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 SUPERFAMILY SSF88659 176 249 4.8E-15 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 296 322 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 Pfam PF04542 Sigma-70 region 2 103 172 3.8E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 Pfam PF00140 Sigma-70 factor, region 1.2 39 67 3.2E-8 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 SUPERFAMILY SSF88659 234 328 3.36E-26 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 Gene3D G3DSA:1.10.601.10 70 175 1.1E-48 T 14-10-2018 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 99 324 5.0E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 Pfam PF04545 Sigma-70, region 4 272 324 1.5E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 Gene3D G3DSA:1.10.10.10 253 336 1.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0248 cecc9f5ef1e28b70df4fe25aaac7d982 337 Pfam PF04539 Sigma-70 region 3 184 257 3.1E-18 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Afer_1511 0de5c33d426c0c03247b35985c5c8fd9 326 Gene3D G3DSA:3.40.718.10 1 326 1.5E-101 T 14-10-2018 Afer_1511 0de5c33d426c0c03247b35985c5c8fd9 326 SUPERFAMILY SSF53659 3 318 6.58E-76 T 14-10-2018 Afer_1511 0de5c33d426c0c03247b35985c5c8fd9 326 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 326 102.074 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Afer_1511 0de5c33d426c0c03247b35985c5c8fd9 326 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 4 317 5.0E-86 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Afer_1511 0de5c33d426c0c03247b35985c5c8fd9 326 PIRSF PIRSF002465 1 325 4.1E-96 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 Afer_1511 0de5c33d426c0c03247b35985c5c8fd9 326 Pfam PF02504 Fatty acid synthesis protein 4 312 4.9E-82 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 Afer_0485 2e7b635ba5b7e2ceadc260cea812aa81 164 Pfam PF04073 Aminoacyl-tRNA editing domain 32 148 1.6E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 Afer_0485 2e7b635ba5b7e2ceadc260cea812aa81 164 SUPERFAMILY SSF55826 14 157 9.16E-24 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Afer_0485 2e7b635ba5b7e2ceadc260cea812aa81 164 Gene3D G3DSA:3.90.960.10 13 160 5.4E-28 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 Afer_1726 751277a35975000c3c7d00d436c0b437 593 SUPERFAMILY SSF47819 518 581 1.44E-5 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 Afer_1726 751277a35975000c3c7d00d436c0b437 593 Pfam PF13245 AAA domain 15 230 1.5E-26 T 14-10-2018 Afer_1726 751277a35975000c3c7d00d436c0b437 593 Gene3D G3DSA:3.40.50.300 294 375 4.7E-6 T 14-10-2018 Afer_1726 751277a35975000c3c7d00d436c0b437 593 Gene3D G3DSA:3.40.50.300 379 500 7.0E-24 T 14-10-2018 Afer_1726 751277a35975000c3c7d00d436c0b437 593 Gene3D G3DSA:3.40.50.300 145 271 6.8E-23 T 14-10-2018 Afer_1726 751277a35975000c3c7d00d436c0b437 593 SUPERFAMILY SSF52540 4 497 1.56E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1726 751277a35975000c3c7d00d436c0b437 593 Gene3D G3DSA:3.40.50.300 3 130 9.6E-19 T 14-10-2018 Afer_1726 751277a35975000c3c7d00d436c0b437 593 Pfam PF13361 UvrD-like helicase C-terminal domain 405 486 7.9E-21 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 Afer_0740 1b47544816e5b5652464321d3096fe53 232 Gene3D G3DSA:3.90.1660.10 51 232 1.7E-67 T 14-10-2018 Afer_0740 1b47544816e5b5652464321d3096fe53 232 Gene3D G3DSA:3.30.1330.100 14 218 1.7E-67 T 14-10-2018 Afer_0740 1b47544816e5b5652464321d3096fe53 232 SUPERFAMILY SSF144010 12 232 1.02E-59 T 14-10-2018 Afer_0740 1b47544816e5b5652464321d3096fe53 232 Pfam PF01996 F420-0:Gamma-glutamyl ligase 75 208 2.2E-36 T 14-10-2018 IPR002847 Coenzyme F420:L-glutamate ligase-like domain KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Afer_0740 1b47544816e5b5652464321d3096fe53 232 TIGRFAM TIGR01916 F420_cofE: coenzyme F420-0:L-glutamate ligase 14 232 3.4E-70 T 14-10-2018 IPR008225 Coenzyme F420:L-glutamate ligase GO:0043773|GO:0046872|GO:0051188 KEGG: 00680+6.3.2.31+6.3.2.34|MetaCyc: PWY-5199 Afer_1310 18d4b31ea314f23d294ae654e1b616fc 248 SUPERFAMILY SSF52540 13 235 8.38E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1310 18d4b31ea314f23d294ae654e1b616fc 248 SMART SM00382 41 229 6.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1310 18d4b31ea314f23d294ae654e1b616fc 248 Pfam PF00005 ABC transporter 32 180 1.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1310 18d4b31ea314f23d294ae654e1b616fc 248 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1310 18d4b31ea314f23d294ae654e1b616fc 248 Gene3D G3DSA:3.40.50.300 12 241 2.6E-66 T 14-10-2018 Afer_0851 5296a625662c0a80296ccf8fba534e79 275 ProSitePatterns PS00171 Triosephosphate isomerase active site. 183 193 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0851 5296a625662c0a80296ccf8fba534e79 275 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 19 259 6.5E-56 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0851 5296a625662c0a80296ccf8fba534e79 275 Gene3D G3DSA:3.20.20.70 12 266 4.5E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0851 5296a625662c0a80296ccf8fba534e79 275 Pfam PF00121 Triosephosphate isomerase 19 264 4.1E-79 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0851 5296a625662c0a80296ccf8fba534e79 275 SUPERFAMILY SSF51351 16 265 3.01E-85 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0851 5296a625662c0a80296ccf8fba534e79 275 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 16 267 53.606 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_1151 72a919604bd9f6c05201d68cd3e4fdfb 552 ProSitePatterns PS00455 Putative AMP-binding domain signature. 190 201 - T 14-10-2018 IPR020845 AMP-binding, conserved site Afer_1151 72a919604bd9f6c05201d68cd3e4fdfb 552 Gene3D G3DSA:3.30.300.310 445 547 5.0E-37 T 14-10-2018 Afer_1151 72a919604bd9f6c05201d68cd3e4fdfb 552 Pfam PF00501 AMP-binding enzyme 20 449 1.2E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 Afer_1151 72a919604bd9f6c05201d68cd3e4fdfb 552 Pfam PF13193 AMP-binding enzyme C-terminal domain 458 533 8.2E-22 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain Afer_1151 72a919604bd9f6c05201d68cd3e4fdfb 552 SUPERFAMILY SSF56801 12 544 5.23E-143 T 14-10-2018 Afer_1151 72a919604bd9f6c05201d68cd3e4fdfb 552 Gene3D G3DSA:3.40.50.12780 1 444 1.0E-113 T 14-10-2018 Afer_0865 2b0cc2b08f794e6e0845de717d8bb5a7 146 SUPERFAMILY SSF51283 8 146 8.11E-44 T 14-10-2018 IPR036157 dUTPase-like superfamily Afer_0865 2b0cc2b08f794e6e0845de717d8bb5a7 146 Pfam PF00692 dUTPase 19 146 1.6E-28 T 14-10-2018 IPR029054 dUTPase-like Afer_0865 2b0cc2b08f794e6e0845de717d8bb5a7 146 TIGRFAM TIGR00576 dut: dUTP diphosphatase 8 146 1.1E-44 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 Afer_0865 2b0cc2b08f794e6e0845de717d8bb5a7 146 Gene3D G3DSA:2.70.40.10 3 146 4.2E-46 T 14-10-2018 IPR036157 dUTPase-like superfamily Afer_1388 b32c263217f7ae267064290de4c87e48 206 Pfam PF13481 AAA domain 5 132 4.8E-12 T 14-10-2018 Afer_1388 b32c263217f7ae267064290de4c87e48 206 Gene3D G3DSA:3.40.50.300 3 196 1.1E-17 T 14-10-2018 Afer_1507 d772c6ad6fb94fbabea1f2d33301c266 1115 PIRSF PIRSF005719 602 1108 1.7E-70 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Afer_1507 d772c6ad6fb94fbabea1f2d33301c266 1115 PIRSF PIRSF005719 277 492 0.0027 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Afer_1507 d772c6ad6fb94fbabea1f2d33301c266 1115 PIRSF PIRSF005719 1 275 2.4E-71 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein Afer_1507 d772c6ad6fb94fbabea1f2d33301c266 1115 Gene3D G3DSA:3.40.50.300 1 230 1.6E-44 T 14-10-2018 Afer_1507 d772c6ad6fb94fbabea1f2d33301c266 1115 Gene3D G3DSA:3.40.50.300 950 1109 6.9E-40 T 14-10-2018 Afer_1507 d772c6ad6fb94fbabea1f2d33301c266 1115 SUPERFAMILY SSF52540 2 1094 2.42E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1507 d772c6ad6fb94fbabea1f2d33301c266 1115 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 1095 7.6E-63 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Afer_1453 31c43590a5273b547a48582fa0a9ab6c 151 Pfam PF01475 Ferric uptake regulator family 13 109 2.4E-16 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 Afer_1453 31c43590a5273b547a48582fa0a9ab6c 151 SUPERFAMILY SSF46785 5 131 8.9E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1453 31c43590a5273b547a48582fa0a9ab6c 151 Gene3D G3DSA:1.10.10.10 1 81 7.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1453 31c43590a5273b547a48582fa0a9ab6c 151 Gene3D G3DSA:3.30.1490.190 85 137 5.5E-5 T 14-10-2018 Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 Gene3D G3DSA:2.40.50.100 2 99 2.1E-29 T 14-10-2018 Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 Pfam PF00364 Biotin-requiring enzyme 3 75 4.4E-24 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 Gene3D G3DSA:4.10.320.10 192 234 3.3E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 SUPERFAMILY SSF51230 3 94 2.36E-28 T 14-10-2018 IPR011053 Single hybrid motif Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 Gene3D G3DSA:3.30.559.10 290 539 7.0E-75 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 307 534 7.9E-64 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 SUPERFAMILY SSF52777 308 534 2.62E-63 T 14-10-2018 Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 Pfam PF02817 e3 binding domain 195 229 6.5E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Afer_0718 7854c8d53bb6d09cd21acc4cd664312c 540 SUPERFAMILY SSF47005 193 233 1.14E-9 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Afer_0539 0314e3989900760e31fb1b3815d51ba7 157 SUPERFAMILY SSF111038 4 130 7.98E-28 T 14-10-2018 IPR035917 YjbQ-like superfamily Afer_0539 0314e3989900760e31fb1b3815d51ba7 157 Pfam PF01894 Uncharacterised protein family UPF0047 21 128 2.3E-20 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Afer_0539 0314e3989900760e31fb1b3815d51ba7 157 Gene3D G3DSA:2.60.120.460 1 133 3.7E-25 T 14-10-2018 IPR035917 YjbQ-like superfamily Afer_0539 0314e3989900760e31fb1b3815d51ba7 157 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 94 112 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 Afer_0632 06d7f91adb95b8813a57e8595b64d60a 428 SUPERFAMILY SSF50156 136 226 1.58E-9 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Afer_0632 06d7f91adb95b8813a57e8595b64d60a 428 SMART SM00228 151 226 3.2E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 Afer_0632 06d7f91adb95b8813a57e8595b64d60a 428 Gene3D G3DSA:2.30.42.10 175 255 1.8E-9 T 14-10-2018 Afer_0632 06d7f91adb95b8813a57e8595b64d60a 428 Pfam PF02163 Peptidase family M50 46 397 4.2E-43 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Afer_0477 7fb166652925bca6b64a87ef56833fc1 235 Gene3D G3DSA:3.40.50.150 3 230 1.3E-39 T 14-10-2018 Afer_0477 7fb166652925bca6b64a87ef56833fc1 235 SUPERFAMILY SSF53335 26 222 8.75E-39 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0477 7fb166652925bca6b64a87ef56833fc1 235 Pfam PF13649 Methyltransferase domain 50 145 2.8E-20 T 14-10-2018 Afer_0333 ba450a0fc135638d3920154e8602565a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 55 72 9.2E-9 T 14-10-2018 Afer_0333 ba450a0fc135638d3920154e8602565a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 29 50 9.2E-9 T 14-10-2018 Afer_0333 ba450a0fc135638d3920154e8602565a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 78 101 9.2E-9 T 14-10-2018 Afer_0333 ba450a0fc135638d3920154e8602565a 221 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 158 177 9.2E-9 T 14-10-2018 Afer_0333 ba450a0fc135638d3920154e8602565a 221 Pfam PF03379 CcmB protein 6 212 8.4E-23 T 14-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_1834 d1196740f5de0d182900155e031767ba 283 SUPERFAMILY SSF54637 7 114 8.89E-41 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_1834 d1196740f5de0d182900155e031767ba 283 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 280 2.5E-88 T 14-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 Afer_1834 d1196740f5de0d182900155e031767ba 283 Gene3D G3DSA:3.10.129.90 1 283 1.9E-106 T 14-10-2018 Afer_1834 d1196740f5de0d182900155e031767ba 283 Pfam PF13622 Thioesterase-like superfamily 31 279 7.0E-59 T 14-10-2018 Afer_1834 d1196740f5de0d182900155e031767ba 283 SUPERFAMILY SSF54637 116 280 1.04E-47 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_1155 54c63fa4009ceb3b59ff8eb9a632b439 272 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 8 263 3.5E-92 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 Afer_1155 54c63fa4009ceb3b59ff8eb9a632b439 272 Gene3D G3DSA:3.40.1190.20 1 269 1.6E-94 T 14-10-2018 IPR029056 Ribokinase-like Afer_1155 54c63fa4009ceb3b59ff8eb9a632b439 272 SUPERFAMILY SSF53613 6 258 1.87E-72 T 14-10-2018 IPR029056 Ribokinase-like Afer_1155 54c63fa4009ceb3b59ff8eb9a632b439 272 Pfam PF08543 Phosphomethylpyrimidine kinase 15 259 9.7E-86 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 Afer_0037 7c2b05d08ad9176e9774c5456b0d99f1 359 Pfam PF01658 Myo-inositol-1-phosphate synthase 191 299 2.5E-31 T 14-10-2018 IPR013021 Myo-inositol-1-phosphate synthase, GAPDH-like KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 Afer_0037 7c2b05d08ad9176e9774c5456b0d99f1 359 PIRSF PIRSF015578 1 355 5.6E-86 T 14-10-2018 IPR002587 Myo-inositol-1-phosphate synthase GO:0004512|GO:0006021|GO:0008654 KEGG: 00521+5.5.1.4|KEGG: 00562+5.5.1.4|MetaCyc: PWY-2301|MetaCyc: PWY-4661|MetaCyc: PWY-6372|MetaCyc: PWY-6580|MetaCyc: PWY-6664|Reactome: R-HSA-1855183 Afer_0037 7c2b05d08ad9176e9774c5456b0d99f1 359 Gene3D G3DSA:3.40.50.720 4 352 5.6E-148 T 14-10-2018 Afer_0037 7c2b05d08ad9176e9774c5456b0d99f1 359 SUPERFAMILY SSF55347 190 298 1.03E-33 T 14-10-2018 Afer_0037 7c2b05d08ad9176e9774c5456b0d99f1 359 Gene3D G3DSA:3.30.360.10 190 299 5.6E-148 T 14-10-2018 Afer_0037 7c2b05d08ad9176e9774c5456b0d99f1 359 SUPERFAMILY SSF51735 3 355 2.08E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0220 b2f47d06d94be203982e4546b640ca15 608 Gene3D G3DSA:3.90.550.10 166 388 8.4E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0220 b2f47d06d94be203982e4546b640ca15 608 SUPERFAMILY SSF53448 173 324 2.16E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0220 b2f47d06d94be203982e4546b640ca15 608 Pfam PF00535 Glycosyl transferase family 2 177 257 2.7E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_1343 64c3fff5a45476089a5ad29ca0094f6a 366 SMART SM00283 110 361 8.7E-40 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Afer_1343 64c3fff5a45476089a5ad29ca0094f6a 366 SUPERFAMILY SSF58104 116 336 1.44E-53 T 14-10-2018 Afer_1343 64c3fff5a45476089a5ad29ca0094f6a 366 Gene3D G3DSA:3.30.450.20 1 105 5.6E-22 T 14-10-2018 Afer_1343 64c3fff5a45476089a5ad29ca0094f6a 366 Gene3D G3DSA:1.10.287.950 106 340 2.2E-49 T 14-10-2018 Afer_1343 64c3fff5a45476089a5ad29ca0094f6a 366 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 124 153 1.6E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Afer_1343 64c3fff5a45476089a5ad29ca0094f6a 366 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 237 266 1.6E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Afer_1343 64c3fff5a45476089a5ad29ca0094f6a 366 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 156 333 1.3E-35 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Afer_1931 f2a31f4f30ddd6f9dc82f66929110119 352 Pfam PF01381 Helix-turn-helix 7 59 1.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Afer_1931 f2a31f4f30ddd6f9dc82f66929110119 352 Gene3D G3DSA:1.10.260.40 3 63 2.6E-17 T 14-10-2018 Afer_1931 f2a31f4f30ddd6f9dc82f66929110119 352 Pfam PF12727 PBP superfamily domain 144 317 4.2E-32 T 14-10-2018 IPR024370 PBP domain Afer_1931 f2a31f4f30ddd6f9dc82f66929110119 352 SUPERFAMILY SSF47413 6 62 1.07E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Afer_1931 f2a31f4f30ddd6f9dc82f66929110119 352 SMART SM00530 4 59 1.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Afer_1532 28a377dfb41d99f40f8e2e1b2e6ba499 382 PIRSF PIRSF000525 6 373 4.4E-72 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 Afer_1532 28a377dfb41d99f40f8e2e1b2e6ba499 382 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 15 372 3.0E-152 T 14-10-2018 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 Afer_1532 28a377dfb41d99f40f8e2e1b2e6ba499 382 SUPERFAMILY SSF53383 18 371 1.36E-69 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1532 28a377dfb41d99f40f8e2e1b2e6ba499 382 Pfam PF00266 Aminotransferase class-V 21 331 3.0E-15 T 14-10-2018 IPR000192 Aminotransferase class V domain Afer_1532 28a377dfb41d99f40f8e2e1b2e6ba499 382 Gene3D G3DSA:3.90.1150.10 268 372 5.3E-37 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1532 28a377dfb41d99f40f8e2e1b2e6ba499 382 Gene3D G3DSA:3.40.640.10 30 266 1.0E-51 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1986 69e4e62d325e47ca9ad97464bbf6ab50 608 Gene3D G3DSA:2.60.40.10 265 351 1.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold Afer_1986 69e4e62d325e47ca9ad97464bbf6ab50 608 Pfam PF01828 Peptidase A4 family 360 526 6.3E-23 T 14-10-2018 IPR000250 Peptidase G1 GO:0004190|GO:0006508 Afer_1986 69e4e62d325e47ca9ad97464bbf6ab50 608 Gene3D G3DSA:2.60.120.700 357 570 7.6E-23 T 14-10-2018 IPR038656 Peptidase G1 superfamily Afer_1986 69e4e62d325e47ca9ad97464bbf6ab50 608 SUPERFAMILY SSF101898 94 223 2.88E-5 T 14-10-2018 Afer_1986 69e4e62d325e47ca9ad97464bbf6ab50 608 SUPERFAMILY SSF49899 358 529 1.66E-23 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily Afer_0736 e10d86688fff5262c62f536f02727687 281 Gene3D G3DSA:3.90.550.10 17 232 5.9E-22 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0736 e10d86688fff5262c62f536f02727687 281 Pfam PF13641 Glycosyltransferase like family 2 62 227 4.2E-7 T 14-10-2018 Afer_0736 e10d86688fff5262c62f536f02727687 281 SUPERFAMILY SSF53448 20 228 6.57E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 SUPERFAMILY SSF51735 3 235 7.41E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 Gene3D G3DSA:3.40.50.720 2 237 3.5E-73 T 14-10-2018 Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 1.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 1.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 1.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 1.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 1.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 180 1.2E-4 T 14-10-2018 Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 235 1.2E-59 T 14-10-2018 Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 4.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 4.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1087 4f4b1d520ed6146f08dcd61ecff31298 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 4.8E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 218 232 2.8E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 19 32 2.8E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 137 155 2.8E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 118 134 2.8E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 56 75 2.8E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 167 184 2.8E-53 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 Gene3D G3DSA:3.40.30.60 337 478 8.8E-45 T 14-10-2018 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 123 146 - T 14-10-2018 IPR025505 FHIPEP conserved site Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 PIRSF PIRSF005419 1 672 5.1E-234 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 Gene3D G3DSA:1.10.8.540 479 568 6.4E-22 T 14-10-2018 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 Gene3D G3DSA:1.10.490.80 569 667 2.5E-6 T 14-10-2018 Afer_0159 c5798347e7165b6d9cd4100c7ff63ee2 676 Pfam PF00771 FHIPEP family 12 659 1.0E-236 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 Afer_0781 2950c9b295f5a8f551e740cdebbf2c5f 429 Gene3D G3DSA:3.40.50.2300 176 305 1.5E-40 T 14-10-2018 Afer_0781 2950c9b295f5a8f551e740cdebbf2c5f 429 SUPERFAMILY SSF53822 49 399 3.13E-42 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Afer_0781 2950c9b295f5a8f551e740cdebbf2c5f 429 Pfam PF13458 Periplasmic binding protein 49 401 4.4E-50 T 14-10-2018 IPR028081 Leucine-binding protein domain Afer_0781 2950c9b295f5a8f551e740cdebbf2c5f 429 Gene3D G3DSA:3.40.50.2300 52 374 1.5E-40 T 14-10-2018 Afer_0624 eaab419d9b8c39a7b795e92cda98af43 332 Pfam PF00589 Phage integrase family 172 312 1.4E-34 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 Afer_0624 eaab419d9b8c39a7b795e92cda98af43 332 SUPERFAMILY SSF56349 160 325 2.53E-44 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Afer_0624 eaab419d9b8c39a7b795e92cda98af43 332 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 56 131 5.0E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Afer_0624 eaab419d9b8c39a7b795e92cda98af43 332 Gene3D G3DSA:1.10.443.10 148 327 4.8E-51 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 Afer_0150 5866cd2156cd543b8c98f65e6b0627d9 302 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 227 295 4.4E-12 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Afer_0150 5866cd2156cd543b8c98f65e6b0627d9 302 SUPERFAMILY SSF103039 23 205 1.96E-13 T 14-10-2018 IPR028976 CheC-like superfamily Afer_0150 5866cd2156cd543b8c98f65e6b0627d9 302 Gene3D G3DSA:3.40.1550.10 22 206 7.2E-32 T 14-10-2018 IPR028976 CheC-like superfamily Afer_0150 5866cd2156cd543b8c98f65e6b0627d9 302 Gene3D G3DSA:2.30.330.10 221 301 2.5E-6 T 14-10-2018 IPR036429 SpoA-like superfamily Afer_0150 5866cd2156cd543b8c98f65e6b0627d9 302 SUPERFAMILY SSF101801 224 297 8.63E-11 T 14-10-2018 IPR036429 SpoA-like superfamily Afer_0150 5866cd2156cd543b8c98f65e6b0627d9 302 Pfam PF02154 Flagellar motor switch protein FliM 16 204 2.0E-21 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 Afer_1968 0bb39d6ffbdcda416917b9964405eb04 495 PIRSF PIRSF006060 1 477 1.1E-51 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1968 0bb39d6ffbdcda416917b9964405eb04 495 Gene3D G3DSA:1.20.1740.10 9 475 1.9E-36 T 14-10-2018 Afer_1968 0bb39d6ffbdcda416917b9964405eb04 495 Pfam PF00324 Amino acid permease 39 458 2.5E-31 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Afer_0573 4dc5c9cabf4a2e68c7c83c2bb5ca3c7b 476 SUPERFAMILY SSF53720 2 471 4.32E-155 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 Afer_0573 4dc5c9cabf4a2e68c7c83c2bb5ca3c7b 476 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 Afer_0573 4dc5c9cabf4a2e68c7c83c2bb5ca3c7b 476 Gene3D G3DSA:3.40.605.10 9 468 1.6E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 Afer_0573 4dc5c9cabf4a2e68c7c83c2bb5ca3c7b 476 Pfam PF00171 Aldehyde dehydrogenase family 14 470 2.8E-158 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 Afer_0573 4dc5c9cabf4a2e68c7c83c2bb5ca3c7b 476 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 Afer_0573 4dc5c9cabf4a2e68c7c83c2bb5ca3c7b 476 Gene3D G3DSA:3.40.309.10 252 440 1.6E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 Gene3D G3DSA:3.40.50.1220 190 338 3.5E-21 T 14-10-2018 Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 2 159 1.5E-21 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 1 419 4.0E-88 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 Gene3D G3DSA:3.40.50.970 353 543 5.5E-39 T 14-10-2018 Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 SUPERFAMILY SSF52518 353 518 4.82E-9 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 1 543 23.481 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 PIRSF PIRSF004983 1 546 1.9E-94 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 Gene3D G3DSA:3.40.50.970 1 160 1.1E-38 T 14-10-2018 Afer_1625 bf6023c89d9504baa960c7b3b1c83f98 546 SUPERFAMILY SSF52518 2 177 1.18E-22 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0021 4a1080f50f9afc2356efd61eb6bf2f75 573 Gene3D G3DSA:3.90.550.10 130 210 5.3E-6 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0021 4a1080f50f9afc2356efd61eb6bf2f75 573 Gene3D G3DSA:3.90.550.10 379 528 1.5E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0021 4a1080f50f9afc2356efd61eb6bf2f75 573 SUPERFAMILY SSF53448 387 532 1.69E-10 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0021 4a1080f50f9afc2356efd61eb6bf2f75 573 Pfam PF13632 Glycosyl transferase family group 2 390 530 4.8E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_0021 4a1080f50f9afc2356efd61eb6bf2f75 573 SUPERFAMILY SSF53448 133 180 2.93E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_2000 66bd8c10a02b0a3d7e19374d3f2296e5 547 Pfam PF13520 Amino acid permease 43 504 5.7E-39 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_2000 66bd8c10a02b0a3d7e19374d3f2296e5 547 PIRSF PIRSF006060 24 534 5.0E-52 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_2000 66bd8c10a02b0a3d7e19374d3f2296e5 547 Gene3D G3DSA:1.20.1740.10 53 532 1.4E-32 T 14-10-2018 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 Hamap MF_01517 Malate dehydrogenase [mdh]. 1 326 51.816 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 SUPERFAMILY SSF51735 1 154 8.39E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 Gene3D G3DSA:3.40.50.720 3 153 2.4E-53 T 14-10-2018 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 3 321 2.6E-135 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 SUPERFAMILY SSF56327 156 326 2.47E-51 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 Gene3D G3DSA:3.90.110.10 155 326 6.8E-55 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 155 167 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 148 4.9E-32 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 156 315 2.0E-27 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 Afer_1880 8c3683b66a950a2b9a5c23d0582684a4 329 PIRSF PIRSF000102 1 323 2.3E-58 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 Afer_0077 d8b8abd68d0592fb80d02cd795e50f8c 138 SUPERFAMILY SSF54197 6 113 4.79E-26 T 14-10-2018 IPR036265 HIT-like superfamily Afer_0077 d8b8abd68d0592fb80d02cd795e50f8c 138 Gene3D G3DSA:3.30.428.10 2 114 3.6E-27 T 14-10-2018 IPR036265 HIT-like superfamily Afer_0077 d8b8abd68d0592fb80d02cd795e50f8c 138 Pfam PF01230 HIT domain 21 105 3.9E-15 T 14-10-2018 IPR001310 Histidine triad (HIT) protein Afer_0077 d8b8abd68d0592fb80d02cd795e50f8c 138 ProSitePatterns PS00892 HIT domain signature. 84 102 - T 14-10-2018 IPR019808 Histidine triad, conserved site Afer_1670 7969207dca746e94c0258939e049faa6 277 SUPERFAMILY SSF54001 12 258 8.24E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily Afer_1670 7969207dca746e94c0258939e049faa6 277 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 12 85 5.7E-17 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal Afer_1670 7969207dca746e94c0258939e049faa6 277 Gene3D G3DSA:3.10.620.30 91 265 1.6E-47 T 14-10-2018 Afer_1670 7969207dca746e94c0258939e049faa6 277 SMART SM00460 166 232 2.1E-14 T 14-10-2018 IPR002931 Transglutaminase-like Afer_1670 7969207dca746e94c0258939e049faa6 277 Pfam PF01841 Transglutaminase-like superfamily 132 230 2.0E-23 T 14-10-2018 IPR002931 Transglutaminase-like Afer_0530 8b99c589cf6477bd7be398dbab4dfbef 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 201 2.0E-23 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 Afer_0530 8b99c589cf6477bd7be398dbab4dfbef 286 SUPERFAMILY SSF53790 3 220 2.88E-53 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 Afer_0530 8b99c589cf6477bd7be398dbab4dfbef 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 4 271 2.5E-50 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Afer_0530 8b99c589cf6477bd7be398dbab4dfbef 286 Gene3D G3DSA:3.40.1010.10 1 111 1.9E-26 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 Afer_0530 8b99c589cf6477bd7be398dbab4dfbef 286 Gene3D G3DSA:3.30.950.10 112 226 2.0E-22 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 Afer_0530 8b99c589cf6477bd7be398dbab4dfbef 286 PIRSF PIRSF005917 1 276 5.5E-66 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 Afer_1232 4935531149e3011c009d24f3fb77146e 257 SUPERFAMILY SSF51735 5 255 1.39E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1232 4935531149e3011c009d24f3fb77146e 257 PIRSF PIRSF000094 1 257 1.2E-77 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 Afer_1232 4935531149e3011c009d24f3fb77146e 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 1.3E-65 T 14-10-2018 Afer_1232 4935531149e3011c009d24f3fb77146e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1232 4935531149e3011c009d24f3fb77146e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1232 4935531149e3011c009d24f3fb77146e 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.2E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1232 4935531149e3011c009d24f3fb77146e 257 Gene3D G3DSA:3.40.50.720 1 255 1.0E-49 T 14-10-2018 Afer_1831 598daa828260e6d2ea3037bb1e75be72 447 Gene3D G3DSA:3.90.660.20 33 391 4.4E-96 T 14-10-2018 Afer_1831 598daa828260e6d2ea3037bb1e75be72 447 Pfam PF01593 Flavin containing amine oxidoreductase 10 441 8.1E-35 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Afer_1831 598daa828260e6d2ea3037bb1e75be72 447 Gene3D G3DSA:3.50.50.60 4 435 4.4E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1831 598daa828260e6d2ea3037bb1e75be72 447 SUPERFAMILY SSF51905 2 442 2.04E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1831 598daa828260e6d2ea3037bb1e75be72 447 Gene3D G3DSA:1.10.3110.10 97 189 4.4E-96 T 14-10-2018 Afer_1831 598daa828260e6d2ea3037bb1e75be72 447 SUPERFAMILY SSF54373 286 391 5.1E-13 T 14-10-2018 Afer_1136 6e468d523beceb2ef41766f5b937097d 535 Gene3D G3DSA:3.40.50.300 1 196 1.6E-31 T 14-10-2018 Afer_1136 6e468d523beceb2ef41766f5b937097d 535 PIRSF PIRSF003128 1 522 2.2E-113 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 Afer_1136 6e468d523beceb2ef41766f5b937097d 535 SUPERFAMILY SSF52540 1 472 3.46E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1136 6e468d523beceb2ef41766f5b937097d 535 Pfam PF02463 RecF/RecN/SMC N terminal domain 14 471 4.1E-11 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal Afer_1136 6e468d523beceb2ef41766f5b937097d 535 Gene3D G3DSA:3.40.50.300 270 518 1.6E-44 T 14-10-2018 Afer_1136 6e468d523beceb2ef41766f5b937097d 535 SMART SM00382 21 474 4.2E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 SUPERFAMILY SSF53271 259 468 8.13E-63 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 PIRSF PIRSF000485 18 475 1.3E-148 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 Gene3D G3DSA:3.60.20.10 22 464 7.1E-134 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 22 464 2.3E-138 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 Pfam PF13522 Glutamine amidotransferase domain 82 217 1.3E-11 T 14-10-2018 Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 21 463 42.896 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 SUPERFAMILY SSF56235 22 265 3.6E-54 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 Gene3D G3DSA:3.40.50.2020 283 447 7.1E-134 T 14-10-2018 Afer_1942 0d54c2926bbb8b080070fde41bfc14e4 478 Pfam PF00156 Phosphoribosyl transferase domain 295 394 2.2E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Afer_1055 a76d10bda3030005286d0e057f3a7ec5 147 SUPERFAMILY SSF51230 11 130 5.23E-16 T 14-10-2018 IPR011053 Single hybrid motif Afer_1055 a76d10bda3030005286d0e057f3a7ec5 147 Gene3D G3DSA:2.40.50.100 9 135 4.2E-17 T 14-10-2018 Afer_1055 a76d10bda3030005286d0e057f3a7ec5 147 Pfam PF01597 Glycine cleavage H-protein 18 127 7.8E-12 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Afer_1328 4d1019b6d6444f9dd36c0b514eb3a499 546 SMART SM00642 28 412 2.2E-99 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Afer_1328 4d1019b6d6444f9dd36c0b514eb3a499 546 Pfam PF00128 Alpha amylase, catalytic domain 43 387 5.1E-74 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 Afer_1328 4d1019b6d6444f9dd36c0b514eb3a499 546 Gene3D G3DSA:3.20.20.80 20 464 5.1E-140 T 14-10-2018 Afer_1328 4d1019b6d6444f9dd36c0b514eb3a499 546 SUPERFAMILY SSF51445 19 468 2.54E-116 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_1328 4d1019b6d6444f9dd36c0b514eb3a499 546 Gene3D G3DSA:3.90.400.10 120 190 5.1E-140 T 14-10-2018 Afer_0599 6452fa0bf09af6b1bf7a086aefafa6fb 369 Gene3D G3DSA:3.30.470.20 134 323 8.7E-34 T 14-10-2018 Afer_0599 6452fa0bf09af6b1bf7a086aefafa6fb 369 Pfam PF01820 D-ala D-ala ligase N-terminus 5 128 2.8E-20 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_0599 6452fa0bf09af6b1bf7a086aefafa6fb 369 Pfam PF07478 D-ala D-ala ligase C-terminus 167 322 8.1E-22 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_0599 6452fa0bf09af6b1bf7a086aefafa6fb 369 Gene3D G3DSA:3.30.1490.20 154 207 8.7E-34 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Afer_0599 6452fa0bf09af6b1bf7a086aefafa6fb 369 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 106 117 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_0599 6452fa0bf09af6b1bf7a086aefafa6fb 369 SUPERFAMILY SSF52440 4 138 1.25E-21 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily Afer_0599 6452fa0bf09af6b1bf7a086aefafa6fb 369 Gene3D G3DSA:3.40.50.20 1 128 3.7E-22 T 14-10-2018 Afer_0599 6452fa0bf09af6b1bf7a086aefafa6fb 369 SUPERFAMILY SSF56059 139 322 3.93E-25 T 14-10-2018 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 433 7.7E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 SUPERFAMILY SSF55957 353 434 4.71E-17 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 SUPERFAMILY SSF53738 149 247 1.1E-20 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 127 9.7E-35 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 Gene3D G3DSA:3.40.120.10 166 348 5.5E-53 T 14-10-2018 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 SUPERFAMILY SSF53738 2 161 1.1E-35 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 Gene3D G3DSA:3.40.120.10 1 132 3.0E-36 T 14-10-2018 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 249 357 8.6E-23 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 Gene3D G3DSA:3.30.310.50 362 438 4.4E-18 T 14-10-2018 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 225 240 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 164 183 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 87 101 2.1E-11 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 150 245 1.0E-14 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 Gene3D G3DSA:3.40.120.10 248 331 5.5E-53 T 14-10-2018 Afer_0431 4842f3cc8938795d25a2a40b30aaa72b 442 SUPERFAMILY SSF53738 249 355 8.63E-23 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 Afer_1777 01b78087369ab8eb34c033e1a502af58 312 PIRSF PIRSF015582 1 312 5.9E-83 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like Afer_1777 01b78087369ab8eb34c033e1a502af58 312 Gene3D G3DSA:3.20.20.60 2 307 1.7E-93 T 14-10-2018 Afer_1777 01b78087369ab8eb34c033e1a502af58 312 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 11 241 5.7E-45 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 Afer_1777 01b78087369ab8eb34c033e1a502af58 312 SUPERFAMILY SSF51621 9 251 1.57E-61 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Afer_1030 6c441b7aabe9d8d6ccdba2a7d2af62fd 269 TIGRFAM TIGR03084 TIGR03084: TIGR03084 family protein 11 263 5.1E-76 T 14-10-2018 IPR017518 Conserved hypothetical protein CHP03084 Afer_1030 6c441b7aabe9d8d6ccdba2a7d2af62fd 269 SUPERFAMILY SSF109854 8 159 1.33E-16 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Afer_1030 6c441b7aabe9d8d6ccdba2a7d2af62fd 269 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 14 233 1.7E-22 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type Afer_1030 6c441b7aabe9d8d6ccdba2a7d2af62fd 269 Gene3D G3DSA:1.20.120.450 8 157 6.7E-10 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes Afer_1030 6c441b7aabe9d8d6ccdba2a7d2af62fd 269 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 15 153 2.0E-12 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 Afer_0109 817b67d35ef5ece4b02cca627d65f7a1 282 SUPERFAMILY SSF50891 127 276 1.46E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Afer_0109 817b67d35ef5ece4b02cca627d65f7a1 282 Gene3D G3DSA:2.40.100.10 119 281 4.8E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Afer_0109 817b67d35ef5ece4b02cca627d65f7a1 282 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 128 275 4.7E-31 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0109 817b67d35ef5ece4b02cca627d65f7a1 282 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 166 178 9.5E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0109 817b67d35ef5ece4b02cca627d65f7a1 282 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 140 155 9.5E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0109 817b67d35ef5ece4b02cca627d65f7a1 282 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 220 9.5E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0109 817b67d35ef5ece4b02cca627d65f7a1 282 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 235 250 9.5E-11 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0560 94b04cf68f50f8d6adfea8228e97c78d 246 SUPERFAMILY SSF52096 3 235 6.97E-56 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0560 94b04cf68f50f8d6adfea8228e97c78d 246 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 96 116 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Afer_0560 94b04cf68f50f8d6adfea8228e97c78d 246 Gene3D G3DSA:3.90.226.10 1 241 5.1E-59 T 14-10-2018 Afer_0560 94b04cf68f50f8d6adfea8228e97c78d 246 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 224 6.3E-38 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_0398 9f71fdf0147cadf2ca7e9a236f43393e 213 Pfam PF00297 Ribosomal protein L3 105 181 1.2E-11 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0398 9f71fdf0147cadf2ca7e9a236f43393e 213 Gene3D G3DSA:2.40.50.620 34 97 3.6E-12 T 14-10-2018 Afer_0398 9f71fdf0147cadf2ca7e9a236f43393e 213 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 3 209 34.806 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0398 9f71fdf0147cadf2ca7e9a236f43393e 213 Gene3D G3DSA:2.40.30.10 129 212 8.0E-17 T 14-10-2018 Afer_0398 9f71fdf0147cadf2ca7e9a236f43393e 213 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 6 206 2.0E-77 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0398 9f71fdf0147cadf2ca7e9a236f43393e 213 SUPERFAMILY SSF50447 3 210 1.06E-70 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily Afer_1555 28cd2c8b74a84c897909c9529cbe32f0 341 SUPERFAMILY SSF52402 3 204 1.76E-42 T 14-10-2018 Afer_1555 28cd2c8b74a84c897909c9529cbe32f0 341 Gene3D G3DSA:3.40.50.620 1 202 6.3E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1555 28cd2c8b74a84c897909c9529cbe32f0 341 Gene3D G3DSA:2.40.30.10 282 340 1.2E-5 T 14-10-2018 Afer_1555 28cd2c8b74a84c897909c9529cbe32f0 341 Pfam PF03054 tRNA methyl transferase 3 336 1.1E-76 T 14-10-2018 Afer_0084 aa396fd6b01dd060bfc6a2bd35aaeaa5 572 Hamap MF_01518 Adenine deaminase [ade]. 23 569 33.041 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Afer_0084 aa396fd6b01dd060bfc6a2bd35aaeaa5 572 Gene3D G3DSA:2.30.40.10 15 355 2.8E-102 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_0084 aa396fd6b01dd060bfc6a2bd35aaeaa5 572 TIGRFAM TIGR01178 ade: adenine deaminase 23 569 5.1E-148 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Afer_0084 aa396fd6b01dd060bfc6a2bd35aaeaa5 572 SUPERFAMILY SSF51338 12 367 1.28E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_0084 aa396fd6b01dd060bfc6a2bd35aaeaa5 572 SUPERFAMILY SSF51556 73 319 6.8E-23 T 14-10-2018 IPR032466 Metal-dependent hydrolase Afer_0084 aa396fd6b01dd060bfc6a2bd35aaeaa5 572 Pfam PF01979 Amidohydrolase family 69 354 1.4E-24 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Afer_0084 aa396fd6b01dd060bfc6a2bd35aaeaa5 572 Gene3D G3DSA:3.20.20.140 73 314 2.8E-102 T 14-10-2018 Afer_0084 aa396fd6b01dd060bfc6a2bd35aaeaa5 572 Pfam PF13382 Adenine deaminase C-terminal domain 413 563 8.2E-57 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 Afer_1337 c9e022e22c7d7d14a73f60f2e87cb538 294 SMART SM00478 47 193 8.9E-14 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Afer_1337 c9e022e22c7d7d14a73f60f2e87cb538 294 Gene3D G3DSA:1.10.10.10 234 293 3.5E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1337 c9e022e22c7d7d14a73f60f2e87cb538 294 Gene3D G3DSA:1.10.340.30 28 140 3.7E-47 T 14-10-2018 Afer_1337 c9e022e22c7d7d14a73f60f2e87cb538 294 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 47 161 4.0E-6 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 Afer_1337 c9e022e22c7d7d14a73f60f2e87cb538 294 SUPERFAMILY SSF48150 26 220 7.38E-44 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 Afer_1337 c9e022e22c7d7d14a73f60f2e87cb538 294 SUPERFAMILY SSF46785 238 281 1.71E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1337 c9e022e22c7d7d14a73f60f2e87cb538 294 Gene3D G3DSA:1.10.1670.10 26 215 3.7E-47 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 Afer_1458 6dbc9c9c5d524334bd5027b692f6c521 466 Gene3D G3DSA:3.90.1300.10 28 454 9.0E-104 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1458 6dbc9c9c5d524334bd5027b692f6c521 466 SUPERFAMILY SSF75304 40 447 6.93E-83 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1458 6dbc9c9c5d524334bd5027b692f6c521 466 Pfam PF01425 Amidase 51 437 6.0E-58 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 Gene3D G3DSA:1.10.720.90 2 56 9.5E-19 T 14-10-2018 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 SUPERFAMILY SSF74731 3 113 2.35E-42 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 Gene3D G3DSA:1.10.1900.20 57 117 4.8E-25 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.0E-35 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.0E-35 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.0E-35 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 Pfam PF00453 Ribosomal protein L20 3 109 4.1E-43 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 4.0E-15 T 14-10-2018 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.329 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1676 545abaf537f5ab88e869021ace8cdae2 122 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 2 111 2.4E-42 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1236 faac3e86cc1e8eb196bc317565a704a1 307 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 37 1.5E-11 T 14-10-2018 IPR019933 DivIVA domain Afer_1236 faac3e86cc1e8eb196bc317565a704a1 307 Pfam PF05103 DivIVA protein 8 149 1.4E-15 T 14-10-2018 IPR007793 DivIVA family Afer_0171 9092dc3d3452635600e29280e8655090 540 SUPERFAMILY SSF53850 30 521 2.17E-89 T 14-10-2018 Afer_0171 9092dc3d3452635600e29280e8655090 540 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 436 4.4E-64 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Afer_0171 9092dc3d3452635600e29280e8655090 540 PIRSF PIRSF002741 1 515 2.3E-53 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 Afer_0171 9092dc3d3452635600e29280e8655090 540 Gene3D G3DSA:3.40.190.10 45 525 1.4E-155 T 14-10-2018 Afer_0171 9092dc3d3452635600e29280e8655090 540 Gene3D G3DSA:3.10.105.10 265 502 1.4E-155 T 14-10-2018 Afer_0171 9092dc3d3452635600e29280e8655090 540 Gene3D G3DSA:3.90.76.10 62 165 1.4E-155 T 14-10-2018 Afer_0232 e83f7522bbe55521f6e964fcec78a091 472 SUPERFAMILY SSF75304 10 460 7.59E-109 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_0232 e83f7522bbe55521f6e964fcec78a091 472 Pfam PF01425 Amidase 28 451 4.2E-81 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_0232 e83f7522bbe55521f6e964fcec78a091 472 Gene3D G3DSA:3.90.1300.10 4 472 4.7E-122 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_0232 e83f7522bbe55521f6e964fcec78a091 472 ProSitePatterns PS00571 Amidases signature. 155 186 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Afer_0129 84eec95ff99ff5aaf9e6b05f7cd3e32b 217 Pfam PF13614 AAA domain 13 57 2.9E-10 T 14-10-2018 IPR025669 AAA domain Afer_0129 84eec95ff99ff5aaf9e6b05f7cd3e32b 217 PIRSF PIRSF009320 11 217 5.8E-34 T 14-10-2018 Afer_0129 84eec95ff99ff5aaf9e6b05f7cd3e32b 217 SUPERFAMILY SSF52540 13 216 1.64E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0129 84eec95ff99ff5aaf9e6b05f7cd3e32b 217 Gene3D G3DSA:3.40.50.300 13 217 9.0E-43 T 14-10-2018 Afer_0238 ab3ea37fd67a147fcc46da7fcbcfa07c 283 SUPERFAMILY SSF52540 18 219 9.27E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0238 ab3ea37fd67a147fcc46da7fcbcfa07c 283 Gene3D G3DSA:3.40.50.300 13 282 1.2E-39 T 14-10-2018 Afer_0238 ab3ea37fd67a147fcc46da7fcbcfa07c 283 Pfam PF02374 Anion-transporting ATPase 92 147 6.7E-7 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Afer_0366 56f8722691df3b07b1fcb87b63cfe788 417 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 29 417 47.927 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0366 56f8722691df3b07b1fcb87b63cfe788 417 Gene3D G3DSA:1.10.645.20 32 417 8.2E-169 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0366 56f8722691df3b07b1fcb87b63cfe788 417 SUPERFAMILY SSF56762 43 417 7.46E-128 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0366 56f8722691df3b07b1fcb87b63cfe788 417 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 147 417 2.8E-115 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0366 56f8722691df3b07b1fcb87b63cfe788 417 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 33 417 4.1E-167 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_1929 faa31a51867acb0279318a59b7881b16 547 Gene3D G3DSA:2.160.20.10 89 445 1.3E-8 T 14-10-2018 IPR012334 Pectin lyase fold Afer_1929 faa31a51867acb0279318a59b7881b16 547 SUPERFAMILY SSF51126 62 386 1.26E-5 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor Afer_1826 f4a159587694e3f9886e7f49056da9e0 300 SUPERFAMILY SSF50022 161 298 3.37E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Afer_1826 f4a159587694e3f9886e7f49056da9e0 300 Gene3D G3DSA:2.102.10.10 149 296 5.0E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Afer_1826 f4a159587694e3f9886e7f49056da9e0 300 Pfam PF00355 Rieske [2Fe-2S] domain 217 272 9.7E-10 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Afer_1326 748f7c80f840b90cd0266c9547367060 264 Gene3D G3DSA:1.20.120.530 117 246 3.6E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Afer_1326 748f7c80f840b90cd0266c9547367060 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 67 83 2.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1326 748f7c80f840b90cd0266c9547367060 264 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 67 2.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1326 748f7c80f840b90cd0266c9547367060 264 Gene3D G3DSA:1.10.10.10 24 100 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1326 748f7c80f840b90cd0266c9547367060 264 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 90 3.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1326 748f7c80f840b90cd0266c9547367060 264 SMART SM00895 121 242 2.0E-16 T 14-10-2018 IPR011711 GntR, C-terminal Afer_1326 748f7c80f840b90cd0266c9547367060 264 SUPERFAMILY SSF48008 119 242 6.28E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Afer_1326 748f7c80f840b90cd0266c9547367060 264 Pfam PF07729 FCD domain 122 240 2.0E-20 T 14-10-2018 IPR011711 GntR, C-terminal Afer_1326 748f7c80f840b90cd0266c9547367060 264 SMART SM00345 34 95 8.4E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_1326 748f7c80f840b90cd0266c9547367060 264 SUPERFAMILY SSF46785 25 112 5.3E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1766 dfc8c4a78477c9fe22b9a1e955fde587 341 Gene3D G3DSA:3.40.50.10490 182 337 6.0E-27 T 14-10-2018 Afer_1766 dfc8c4a78477c9fe22b9a1e955fde587 341 Gene3D G3DSA:3.40.50.10490 7 162 2.0E-30 T 14-10-2018 Afer_1766 dfc8c4a78477c9fe22b9a1e955fde587 341 SUPERFAMILY SSF53697 44 329 3.14E-48 T 14-10-2018 Afer_1766 dfc8c4a78477c9fe22b9a1e955fde587 341 Pfam PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain 188 335 1.9E-40 T 14-10-2018 IPR019490 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal GO:0004347|GO:0004476|GO:0005975 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00051+5.3.1.8|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.8+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 Afer_1766 dfc8c4a78477c9fe22b9a1e955fde587 341 Pfam PF01380 SIS domain 36 118 5.3E-6 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 Afer_1971 624995f4e428626bba9c72e268c0527f 1084 SUPERFAMILY SSF53448 803 1032 1.78E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1971 624995f4e428626bba9c72e268c0527f 1084 SUPERFAMILY SSF53335 23 196 8.31E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1971 624995f4e428626bba9c72e268c0527f 1084 Pfam PF13578 Methyltransferase domain 46 162 7.8E-24 T 14-10-2018 Afer_1971 624995f4e428626bba9c72e268c0527f 1084 SUPERFAMILY SSF53448 539 755 1.13E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1971 624995f4e428626bba9c72e268c0527f 1084 Gene3D G3DSA:3.90.550.10 794 1030 4.3E-33 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1971 624995f4e428626bba9c72e268c0527f 1084 Pfam PF00535 Glycosyl transferase family 2 804 986 3.7E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_1971 624995f4e428626bba9c72e268c0527f 1084 Pfam PF00535 Glycosyl transferase family 2 542 648 5.8E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_1971 624995f4e428626bba9c72e268c0527f 1084 Gene3D G3DSA:3.40.50.150 24 189 5.8E-17 T 14-10-2018 Afer_1971 624995f4e428626bba9c72e268c0527f 1084 Gene3D G3DSA:3.90.550.10 497 781 5.8E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1190 c83b0df5f7fb90fe85313ee875b76883 417 Pfam PF00202 Aminotransferase class-III 16 410 1.6E-83 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1190 c83b0df5f7fb90fe85313ee875b76883 417 PIRSF PIRSF000521 158 413 2.3E-22 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1190 c83b0df5f7fb90fe85313ee875b76883 417 PIRSF PIRSF000521 11 128 4.4E-6 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1190 c83b0df5f7fb90fe85313ee875b76883 417 SUPERFAMILY SSF53383 4 411 1.53E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1190 c83b0df5f7fb90fe85313ee875b76883 417 Gene3D G3DSA:3.40.640.10 53 312 3.5E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1190 c83b0df5f7fb90fe85313ee875b76883 417 Gene3D G3DSA:3.90.1150.10 4 411 3.5E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1833 53d88e82ecfe7c0d79b0f74c8b9ac6ea 159 Pfam PF04138 GtrA-like protein 22 149 5.6E-9 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 Afer_1949 a4342d53d7c1e5d8c197f5623b93d342 612 SUPERFAMILY SSF160246 12 146 1.49E-24 T 14-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily Afer_1949 a4342d53d7c1e5d8c197f5623b93d342 612 Pfam PF13641 Glycosyltransferase like family 2 245 471 1.6E-34 T 14-10-2018 Afer_1949 a4342d53d7c1e5d8c197f5623b93d342 612 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 48 150 6.6E-13 T 14-10-2018 IPR007831 General secretory system II, protein E, N-terminal Afer_1949 a4342d53d7c1e5d8c197f5623b93d342 612 Gene3D G3DSA:3.90.550.10 235 452 9.2E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1949 a4342d53d7c1e5d8c197f5623b93d342 612 SUPERFAMILY SSF53448 235 496 2.53E-38 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1798 38d1b0666833d9998dec8307f5467dbd 288 Pfam PF00213 ATP synthase delta (OSCP) subunit 120 282 6.1E-25 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1798 38d1b0666833d9998dec8307f5467dbd 288 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 120 282 1.3E-20 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1798 38d1b0666833d9998dec8307f5467dbd 288 PRINTS PR00125 ATP synthase delta subunit signature 261 279 1.1E-8 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1798 38d1b0666833d9998dec8307f5467dbd 288 PRINTS PR00125 ATP synthase delta subunit signature 246 261 1.1E-8 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1798 38d1b0666833d9998dec8307f5467dbd 288 PRINTS PR00125 ATP synthase delta subunit signature 116 135 1.1E-8 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1798 38d1b0666833d9998dec8307f5467dbd 288 Hamap MF_01416 ATP synthase subunit delta [atpD]. 112 288 12.383 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 Afer_1015 90d1e5aa94a2e64a04c5f7c3adf1d565 166 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 63 134 8.0E-7 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 Afer_1015 90d1e5aa94a2e64a04c5f7c3adf1d565 166 Gene3D G3DSA:3.30.420.40 56 144 8.3E-10 T 14-10-2018 Afer_1015 90d1e5aa94a2e64a04c5f7c3adf1d565 166 SUPERFAMILY SSF53067 61 135 8.42E-5 T 14-10-2018 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 SUPERFAMILY SSF63418 39 127 8.24E-18 T 14-10-2018 IPR035911 MurE/MurF, N-terminal Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 29 491 30.679 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 Pfam PF08245 Mur ligase middle domain 137 317 6.2E-41 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 Gene3D G3DSA:3.40.1190.10 128 338 1.7E-63 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 SUPERFAMILY SSF53244 339 493 1.24E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 49 491 1.7E-134 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 135 158 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 SUPERFAMILY SSF53623 128 335 4.84E-60 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 Gene3D G3DSA:3.40.1390.10 27 127 1.4E-20 T 14-10-2018 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 Gene3D G3DSA:3.90.190.20 349 495 9.0E-54 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 424 2.3E-19 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Afer_1249 656c25049a4f6c982ad3af4d48f50e2c 499 Pfam PF01225 Mur ligase family, catalytic domain 51 118 4.2E-9 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 Afer_0163 e153df22e6580285e87ed270c86b5b98 403 SUPERFAMILY SSF51905 3 330 4.43E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0163 e153df22e6580285e87ed270c86b5b98 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 292 1.4E-13 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0163 e153df22e6580285e87ed270c86b5b98 403 Gene3D G3DSA:3.50.50.100 2 401 3.1E-110 T 14-10-2018 Afer_0163 e153df22e6580285e87ed270c86b5b98 403 SUPERFAMILY SSF51905 127 252 1.62E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1037 1adbb4554c81e005fd161dba044c5570 174 Pfam PF12802 MarR family 52 107 1.5E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1037 1adbb4554c81e005fd161dba044c5570 174 SUPERFAMILY SSF46785 22 155 2.69E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1037 1adbb4554c81e005fd161dba044c5570 174 SMART SM00347 43 143 4.4E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1037 1adbb4554c81e005fd161dba044c5570 174 Gene3D G3DSA:1.10.10.10 12 155 2.3E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1037 1adbb4554c81e005fd161dba044c5570 174 ProSitePatterns PS01117 MarR-type HTH domain signature. 81 116 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site Afer_1037 1adbb4554c81e005fd161dba044c5570 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 99 1.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1037 1adbb4554c81e005fd161dba044c5570 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 133 153 1.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1037 1adbb4554c81e005fd161dba044c5570 174 PRINTS PR00598 Bacterial regulatory protein MarR family signature 103 119 1.2E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 Gene3D G3DSA:1.10.3210.10 6 185 5.8E-75 T 14-10-2018 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 Gene3D G3DSA:3.10.20.30 369 441 7.7E-33 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 Pfam PF13291 ACT domain 628 704 4.8E-15 T 14-10-2018 IPR002912 ACT domain Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 SMART SM00954 229 339 2.3E-60 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 20 702 2.1E-241 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 SUPERFAMILY SSF81301 186 345 7.36E-57 T 14-10-2018 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 Pfam PF04607 Region found in RelA / SpoT proteins 230 339 5.4E-34 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 Pfam PF02824 TGS domain 376 435 5.8E-24 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 SMART SM00471 35 147 1.3E-9 T 14-10-2018 IPR003607 HD/PDEase domain Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 Gene3D G3DSA:3.30.460.10 187 319 5.4E-46 T 14-10-2018 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 SUPERFAMILY SSF109604 11 185 1.88E-69 T 14-10-2018 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 SUPERFAMILY SSF55021 631 706 2.66E-12 T 14-10-2018 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 Pfam PF13328 HD domain 20 169 6.2E-49 T 14-10-2018 IPR003607 HD/PDEase domain Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 Gene3D G3DSA:3.30.70.260 628 707 5.2E-15 T 14-10-2018 Afer_0947 db5dcb46af3ca9185619a93ba5723910 721 SUPERFAMILY SSF81271 363 436 1.29E-23 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 Afer_0340 0958109a9a27c0cfabef559169849a91 205 Pfam PF00174 Oxidoreductase molybdopterin binding domain 38 185 1.6E-34 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 Afer_0340 0958109a9a27c0cfabef559169849a91 205 Gene3D G3DSA:3.90.420.10 31 205 1.6E-47 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Afer_0340 0958109a9a27c0cfabef559169849a91 205 SUPERFAMILY SSF56524 15 203 9.16E-60 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 Afer_1325 29360f70f8cf437ec4070c1fdbc4c7ea 464 Pfam PF13520 Amino acid permease 23 416 1.6E-31 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1325 29360f70f8cf437ec4070c1fdbc4c7ea 464 Gene3D G3DSA:1.20.1740.10 15 449 4.1E-56 T 14-10-2018 Afer_1325 29360f70f8cf437ec4070c1fdbc4c7ea 464 PIRSF PIRSF006060 1 447 5.7E-54 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_2024 239525d30cd584f52c8a7e5d3bfbd089 281 Pfam PF09339 IclR helix-turn-helix domain 13 62 1.3E-15 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Afer_2024 239525d30cd584f52c8a7e5d3bfbd089 281 SUPERFAMILY SSF46785 11 79 8.4E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_2024 239525d30cd584f52c8a7e5d3bfbd089 281 SUPERFAMILY SSF55781 76 252 2.62E-41 T 14-10-2018 Afer_2024 239525d30cd584f52c8a7e5d3bfbd089 281 Pfam PF01614 Bacterial transcriptional regulator 129 252 6.7E-28 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal Afer_2024 239525d30cd584f52c8a7e5d3bfbd089 281 SMART SM00346 11 99 3.1E-23 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 Afer_2024 239525d30cd584f52c8a7e5d3bfbd089 281 Gene3D G3DSA:1.10.10.10 3 79 7.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_2024 239525d30cd584f52c8a7e5d3bfbd089 281 Gene3D G3DSA:3.30.450.40 82 259 3.6E-50 T 14-10-2018 IPR029016 GAF-like domain superfamily Afer_0453 b120651d7374abed90da099700c33458 257 SUPERFAMILY SSF55811 91 247 2.98E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Afer_0453 b120651d7374abed90da099700c33458 257 Gene3D G3DSA:3.90.79.10 75 253 3.5E-37 T 14-10-2018 Afer_0453 b120651d7374abed90da099700c33458 257 ProSitePatterns PS00893 Nudix box signature. 132 153 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Afer_0453 b120651d7374abed90da099700c33458 257 Pfam PF00293 NUDIX domain 97 212 2.0E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Afer_1271 a0b2481ce6e3e8a4bdbafde25522228e 329 Pfam PF02562 PhoH-like protein 117 319 3.2E-86 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 Afer_1271 a0b2481ce6e3e8a4bdbafde25522228e 329 Gene3D G3DSA:3.40.50.300 114 319 7.5E-67 T 14-10-2018 Afer_1271 a0b2481ce6e3e8a4bdbafde25522228e 329 SUPERFAMILY SSF52540 116 291 1.97E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0362 ba2d254b24136bc556c90153dfae3179 436 Gene3D G3DSA:3.50.50.60 7 388 9.9E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0362 ba2d254b24136bc556c90153dfae3179 436 SUPERFAMILY SSF51905 11 382 2.87E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0362 ba2d254b24136bc556c90153dfae3179 436 Pfam PF01494 FAD binding domain 11 333 1.6E-21 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 Afer_0362 ba2d254b24136bc556c90153dfae3179 436 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 326 3.3E-11 T 14-10-2018 Afer_0362 ba2d254b24136bc556c90153dfae3179 436 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 12 34 3.3E-11 T 14-10-2018 Afer_0362 ba2d254b24136bc556c90153dfae3179 436 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 160 175 3.3E-11 T 14-10-2018 Afer_0362 ba2d254b24136bc556c90153dfae3179 436 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 310 3.3E-11 T 14-10-2018 Afer_0362 ba2d254b24136bc556c90153dfae3179 436 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 13 330 5.8E-64 T 14-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 Afer_0790 15200df808cfebe8488b01b25f412956 206 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 5 191 1.3E-43 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Afer_0790 15200df808cfebe8488b01b25f412956 206 SUPERFAMILY SSF52374 2 194 2.68E-42 T 14-10-2018 Afer_0790 15200df808cfebe8488b01b25f412956 206 Pfam PF01467 Cytidylyltransferase-like 5 166 5.5E-24 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Afer_0790 15200df808cfebe8488b01b25f412956 206 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 1 192 27.571 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 Afer_0790 15200df808cfebe8488b01b25f412956 206 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 65 1.3E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 Afer_0790 15200df808cfebe8488b01b25f412956 206 Gene3D G3DSA:3.40.50.620 1 196 8.0E-50 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0033 ed9621a1b175b43730800f3302c9283f 169 SUPERFAMILY SSF81301 80 169 9.27E-20 T 14-10-2018 Afer_0033 ed9621a1b175b43730800f3302c9283f 169 Gene3D G3DSA:1.10.260.40 2 72 2.8E-16 T 14-10-2018 Afer_0033 ed9621a1b175b43730800f3302c9283f 169 Gene3D G3DSA:3.30.460.10 76 169 3.8E-23 T 14-10-2018 Afer_0033 ed9621a1b175b43730800f3302c9283f 169 SUPERFAMILY SSF47413 3 60 1.45E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Afer_0033 ed9621a1b175b43730800f3302c9283f 169 Pfam PF13560 Helix-turn-helix domain 4 58 2.5E-13 T 14-10-2018 Afer_0033 ed9621a1b175b43730800f3302c9283f 169 SMART SM00530 7 66 2.9E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Afer_0033 ed9621a1b175b43730800f3302c9283f 169 Pfam PF01909 Nucleotidyltransferase domain 96 166 1.1E-12 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Afer_1106 98536d4238962a40dac63d34b095ed2a 254 SUPERFAMILY SSF51366 1 251 6.67E-71 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Afer_1106 98536d4238962a40dac63d34b095ed2a 254 Gene3D G3DSA:3.20.20.70 2 253 4.2E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1106 98536d4238962a40dac63d34b095ed2a 254 Pfam PF00977 Histidine biosynthesis protein 5 233 6.2E-80 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 Afer_1106 98536d4238962a40dac63d34b095ed2a 254 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 250 2.4E-96 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Afer_1106 98536d4238962a40dac63d34b095ed2a 254 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 250 43.997 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 Afer_1065 49c7d59d053d64cc928314205052cd2c 404 Gene3D G3DSA:1.20.1250.20 3 390 6.3E-29 T 14-10-2018 Afer_1065 49c7d59d053d64cc928314205052cd2c 404 SUPERFAMILY SSF103473 1 392 4.58E-34 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1065 49c7d59d053d64cc928314205052cd2c 404 Pfam PF07690 Major Facilitator Superfamily 17 359 6.7E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_0039 8b3115f5534617d3933d0697a814f5ad 129 Pfam PF17249 Family of unknown function (DUF5318) 16 121 1.3E-19 T 14-10-2018 IPR035169 Protein of unknown function DUF5318 Afer_0970 e63b83e94152926d42f276b28b015b50 316 Pfam PF01012 Electron transfer flavoprotein domain 5 176 2.5E-30 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Afer_0970 e63b83e94152926d42f276b28b015b50 316 Gene3D G3DSA:3.40.50.620 2 183 1.1E-36 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0970 e63b83e94152926d42f276b28b015b50 316 SMART SM00893 5 190 4.8E-22 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Afer_0970 e63b83e94152926d42f276b28b015b50 316 SUPERFAMILY SSF52402 5 179 4.4E-33 T 14-10-2018 Afer_0970 e63b83e94152926d42f276b28b015b50 316 Gene3D G3DSA:3.40.50.1220 192 316 2.4E-47 T 14-10-2018 Afer_0970 e63b83e94152926d42f276b28b015b50 316 PIRSF PIRSF000089 1 316 4.3E-82 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 Afer_0970 e63b83e94152926d42f276b28b015b50 316 SUPERFAMILY SSF52467 196 316 3.39E-40 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Afer_0970 e63b83e94152926d42f276b28b015b50 316 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 196 278 2.4E-31 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 Afer_0317 274815f881e6021d1e5ee86777c3e8d2 127 Pfam PF02467 Transcription factor WhiB 57 120 2.2E-23 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain Afer_0317 274815f881e6021d1e5ee86777c3e8d2 127 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 53 124 16.738 T 14-10-2018 IPR003482 Transcription factor WhiB Afer_1364 8a15d9a9305c3d4ae8c63eab0e5b6f64 344 Gene3D G3DSA:1.10.3210.10 15 329 3.2E-73 T 14-10-2018 Afer_1364 8a15d9a9305c3d4ae8c63eab0e5b6f64 344 Pfam PF13286 Phosphohydrolase-associated domain 245 326 7.8E-11 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain Afer_1364 8a15d9a9305c3d4ae8c63eab0e5b6f64 344 Pfam PF01966 HD domain 88 193 5.3E-16 T 14-10-2018 IPR006674 HD domain Afer_1364 8a15d9a9305c3d4ae8c63eab0e5b6f64 344 SUPERFAMILY SSF109604 45 328 1.81E-59 T 14-10-2018 Afer_1364 8a15d9a9305c3d4ae8c63eab0e5b6f64 344 SMART SM00471 84 203 3.2E-12 T 14-10-2018 IPR003607 HD/PDEase domain Afer_1865 00794c65867a0017b0e98c245807839b 413 SUPERFAMILY SSF53098 118 288 4.17E-17 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1865 00794c65867a0017b0e98c245807839b 413 Pfam PF00665 Integrase core domain 118 245 5.4E-17 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_1518 3b6f30de1bacd294647f61057d496178 62 SUPERFAMILY SSF143800 1 61 1.28E-22 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1518 3b6f30de1bacd294647f61057d496178 62 Gene3D G3DSA:2.30.170.40 3 61 5.9E-17 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1518 3b6f30de1bacd294647f61057d496178 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 16.423 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1518 3b6f30de1bacd294647f61057d496178 62 Pfam PF00830 Ribosomal L28 family 4 57 4.4E-19 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1518 3b6f30de1bacd294647f61057d496178 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 3.4E-20 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1824 6468c83b0c19bfcf80473a28047b14f2 257 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 167 238 3.2E-11 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1824 6468c83b0c19bfcf80473a28047b14f2 257 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 184 232 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1824 6468c83b0c19bfcf80473a28047b14f2 257 Gene3D G3DSA:1.10.287.90 43 122 3.1E-19 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1824 6468c83b0c19bfcf80473a28047b14f2 257 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 65 119 1.7E-6 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1824 6468c83b0c19bfcf80473a28047b14f2 257 SUPERFAMILY SSF81464 31 126 7.03E-17 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1824 6468c83b0c19bfcf80473a28047b14f2 257 SUPERFAMILY SSF49503 131 252 1.28E-33 T 14-10-2018 IPR008972 Cupredoxin Afer_1824 6468c83b0c19bfcf80473a28047b14f2 257 Gene3D G3DSA:2.60.40.420 123 257 7.8E-37 T 14-10-2018 IPR008972 Cupredoxin Afer_1398 fa0ca0ee7f79ef163aad6ee01010c865 171 SUPERFAMILY SSF141571 67 96 2.35E-5 T 14-10-2018 Afer_1398 fa0ca0ee7f79ef163aad6ee01010c865 171 Pfam PF00805 Pentapeptide repeats (8 copies) 65 97 1.5E-5 T 14-10-2018 IPR001646 Pentapeptide repeat Afer_1983 48272bcf3f8c808a7e542d8333261548 451 SUPERFAMILY SSF53383 42 447 1.93E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1983 48272bcf3f8c808a7e542d8333261548 451 Pfam PF00202 Aminotransferase class-III 48 388 8.0E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1983 48272bcf3f8c808a7e542d8333261548 451 Gene3D G3DSA:3.40.640.10 90 344 2.6E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1983 48272bcf3f8c808a7e542d8333261548 451 Gene3D G3DSA:3.90.1150.10 23 438 2.6E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 PRINTS PR00151 Porphobilinogen deaminase signature 37 57 8.5E-30 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 PRINTS PR00151 Porphobilinogen deaminase signature 112 129 8.5E-30 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 PRINTS PR00151 Porphobilinogen deaminase signature 68 87 8.5E-30 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 PRINTS PR00151 Porphobilinogen deaminase signature 216 233 8.5E-30 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 PRINTS PR00151 Porphobilinogen deaminase signature 131 148 8.5E-30 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 SUPERFAMILY SSF53850 3 204 3.04E-58 T 14-10-2018 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 Gene3D G3DSA:3.40.190.10 94 188 7.5E-59 T 14-10-2018 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 278 5.9E-79 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 Gene3D G3DSA:3.30.160.40 207 289 3.1E-17 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 194 6.3E-62 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 SUPERFAMILY SSF54782 206 287 2.22E-15 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 213 278 1.6E-12 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 Gene3D G3DSA:3.40.190.10 4 194 7.5E-59 T 14-10-2018 Afer_0250 32f1dfdc37ce411b6d478171ed3691a6 291 PIRSF PIRSF001438 1 290 1.6E-89 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 Afer_0353 5e8e6efc29b22bd76adbd86b39f65823 251 PIRSF PIRSF000090 1 251 4.3E-62 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 Afer_0353 5e8e6efc29b22bd76adbd86b39f65823 251 Pfam PF01012 Electron transfer flavoprotein domain 25 205 2.1E-41 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Afer_0353 5e8e6efc29b22bd76adbd86b39f65823 251 SUPERFAMILY SSF52402 2 240 2.65E-58 T 14-10-2018 Afer_0353 5e8e6efc29b22bd76adbd86b39f65823 251 SMART SM00893 22 210 4.1E-42 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 Afer_0353 5e8e6efc29b22bd76adbd86b39f65823 251 Gene3D G3DSA:3.40.50.620 1 246 2.9E-69 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0709 966926e7705f7ab9dd6fdb1a62db5955 279 Pfam PF08443 RimK-like ATP-grasp domain 116 273 2.2E-34 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 Afer_0709 966926e7705f7ab9dd6fdb1a62db5955 279 Gene3D G3DSA:3.30.470.80 169 276 8.6E-27 T 14-10-2018 Afer_0709 966926e7705f7ab9dd6fdb1a62db5955 279 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 47 272 1.7E-47 T 14-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 Afer_0709 966926e7705f7ab9dd6fdb1a62db5955 279 Gene3D G3DSA:3.40.50.20 9 95 4.3E-7 T 14-10-2018 Afer_0709 966926e7705f7ab9dd6fdb1a62db5955 279 SUPERFAMILY SSF56059 71 276 4.16E-33 T 14-10-2018 Afer_0709 966926e7705f7ab9dd6fdb1a62db5955 279 Gene3D G3DSA:3.30.1490.20 111 167 3.7E-6 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 Pfam PF01808 AICARFT/IMPCHase bienzyme 124 430 9.5E-85 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 497 34.488 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 SMART SM00851 13 119 1.8E-26 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 Gene3D G3DSA:3.40.140.20 191 346 4.3E-40 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 Pfam PF02142 MGS-like domain 14 111 2.5E-12 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 SUPERFAMILY SSF52335 3 179 1.01E-46 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 SMART SM00798 124 432 1.2E-104 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 PIRSF PIRSF000414 1 497 8.7E-147 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 SUPERFAMILY SSF53927 195 497 3.71E-89 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 Gene3D G3DSA:3.40.50.1380 1 182 2.8E-60 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily Afer_0322 46f3448cd1ed2c56fd53d7f1042b7287 497 Gene3D G3DSA:3.40.140.20 368 497 2.1E-40 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 124 5.2E-25 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 Gene3D G3DSA:3.40.50.720 2 253 5.0E-64 T 14-10-2018 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 146 163 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 PIRSF PIRSF000161 1 266 1.8E-55 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 SUPERFAMILY SSF55347 125 238 1.53E-24 T 14-10-2018 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 Gene3D G3DSA:3.30.360.10 126 236 5.0E-64 T 14-10-2018 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 127 265 2.5E-24 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 266 4.0E-61 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0645 3b01583394d415db49122d9924f3ae0a 266 SUPERFAMILY SSF51735 1 148 2.58E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0645 3b01583394d415db49122d9924f3ae0a 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 266 25.151 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 Pfam PF00288 GHMP kinases N terminal domain 78 140 2.4E-5 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 Gene3D G3DSA:3.30.230.10 10 153 5.5E-24 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 Gene3D G3DSA:3.30.70.890 154 279 4.3E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 SUPERFAMILY SSF54211 9 139 6.68E-21 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 PRINTS PR00958 Homoserine kinase signature 235 250 6.5E-22 T 14-10-2018 Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 PRINTS PR00958 Homoserine kinase signature 16 31 6.5E-22 T 14-10-2018 Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 PRINTS PR00958 Homoserine kinase signature 157 174 6.5E-22 T 14-10-2018 Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 PRINTS PR00958 Homoserine kinase signature 117 130 6.5E-22 T 14-10-2018 Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 84 95 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 Pfam PF08544 GHMP kinases C terminal 194 267 1.6E-9 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 Hamap MF_00384 Homoserine kinase [thrB]. 11 289 26.514 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 Afer_0650 b449e3f05b469a95847daeeab6b6eb70 311 SUPERFAMILY SSF55060 153 268 1.17E-24 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily Afer_0099 0ef0c4518e1d71e150d1c15ee0d0faf6 386 Gene3D G3DSA:3.30.70.1380 236 328 1.6E-12 T 14-10-2018 Afer_0099 0ef0c4518e1d71e150d1c15ee0d0faf6 386 Pfam PF01969 Protein of unknown function DUF111 6 369 2.1E-82 T 14-10-2018 IPR002822 Nickel insertion protein Afer_0877 59885fe6e567527c7f45e988e9d0555f 333 Gene3D G3DSA:3.40.50.10440 12 184 2.6E-67 T 14-10-2018 Afer_0877 59885fe6e567527c7f45e988e9d0555f 333 SUPERFAMILY SSF82549 10 330 3.14E-122 T 14-10-2018 Afer_0877 59885fe6e567527c7f45e988e9d0555f 333 Gene3D G3DSA:3.30.1180.20 185 333 6.4E-50 T 14-10-2018 Afer_0877 59885fe6e567527c7f45e988e9d0555f 333 Pfam PF02733 Dak1 domain 18 327 2.1E-128 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Afer_0877 59885fe6e567527c7f45e988e9d0555f 333 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 328 1.4E-147 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 Afer_0433 c511d6772fee402f7cc9623df99d72e5 366 Pfam PF03595 Voltage-dependent anion channel 17 348 2.7E-58 T 14-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 Afer_0433 c511d6772fee402f7cc9623df99d72e5 366 Gene3D G3DSA:1.50.10.150 14 356 7.2E-15 T 14-10-2018 IPR038665 Voltage-dependent anion channel superfamily Afer_1178 8c500fa56ea412b50862674e5de9e322 564 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 9 557 4.3E-208 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Afer_1178 8c500fa56ea412b50862674e5de9e322 564 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 559 32.217 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Afer_1178 8c500fa56ea412b50862674e5de9e322 564 PIRSF PIRSF001294 1 561 7.1E-215 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Afer_1178 8c500fa56ea412b50862674e5de9e322 564 Pfam PF03814 Potassium-transporting ATPase A subunit 9 556 1.3E-222 T 14-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 Afer_1626 928f5a328091cc4fc43e30892fd4ff95 278 SUPERFAMILY SSF53474 20 268 9.7E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1626 928f5a328091cc4fc43e30892fd4ff95 278 Gene3D G3DSA:3.40.50.1820 15 269 1.0E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1626 928f5a328091cc4fc43e30892fd4ff95 278 Pfam PF12697 Alpha/beta hydrolase family 30 258 3.3E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_1186 d89bc5c1e873362b50fa3508b454336d 220 Gene3D G3DSA:1.10.10.1320 9 66 1.5E-9 T 14-10-2018 Afer_1186 d89bc5c1e873362b50fa3508b454336d 220 Pfam PF13490 Putative zinc-finger 13 38 3.5E-7 T 14-10-2018 IPR027383 Putative zinc-finger Afer_0329 4e33f557669ab55532c714cbc41defe5 268 Pfam PF07837 Formiminotransferase domain, N-terminal subdomain 2 155 3.1E-37 T 14-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Afer_0329 4e33f557669ab55532c714cbc41defe5 268 SMART SM01221 157 258 4.6E-24 T 14-10-2018 IPR013802 Formiminotransferase, C-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_0329 4e33f557669ab55532c714cbc41defe5 268 SMART SM01222 1 156 1.3E-60 T 14-10-2018 IPR012886 Formiminotransferase, N-terminal subdomain GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Afer_0329 4e33f557669ab55532c714cbc41defe5 268 Gene3D G3DSA:3.30.990.10 1 156 2.1E-41 T 14-10-2018 IPR037064 Formiminotransferase, N-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Afer_0329 4e33f557669ab55532c714cbc41defe5 268 SUPERFAMILY SSF55116 157 244 9.15E-13 T 14-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Afer_0329 4e33f557669ab55532c714cbc41defe5 268 SUPERFAMILY SSF55116 2 155 2.88E-37 T 14-10-2018 IPR022384 Formiminotransferase catalytic domain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030 Afer_0329 4e33f557669ab55532c714cbc41defe5 268 Gene3D G3DSA:3.30.70.670 158 249 4.0E-9 T 14-10-2018 IPR037070 Formiminotransferase, C-terminal subdomain superfamily GO:0005542|GO:0016740 KEGG: 00340+2.1.2.5|KEGG: 00670+2.1.2.5|MetaCyc: PWY-5030|Reactome: R-HSA-70921 Afer_0968 bca9ae60d042c0be9841c5d89fa5a00d 437 SUPERFAMILY SSF46548 63 143 2.09E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0968 bca9ae60d042c0be9841c5d89fa5a00d 437 Gene3D G3DSA:3.30.70.20 63 125 6.2E-8 T 14-10-2018 Afer_0968 bca9ae60d042c0be9841c5d89fa5a00d 437 Pfam PF02754 Cysteine-rich domain 201 270 5.8E-4 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_0968 bca9ae60d042c0be9841c5d89fa5a00d 437 Pfam PF02754 Cysteine-rich domain 312 397 9.6E-15 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_0968 bca9ae60d042c0be9841c5d89fa5a00d 437 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 109 120 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_0968 bca9ae60d042c0be9841c5d89fa5a00d 437 Pfam PF13187 4Fe-4S dicluster domain 67 122 4.1E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_1273 b2639539a132263179f6ff50f7245e2b 79 Pfam PF12728 Helix-turn-helix domain 5 53 4.9E-17 T 14-10-2018 Afer_1273 b2639539a132263179f6ff50f7245e2b 79 SUPERFAMILY SSF46955 5 57 5.31E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Afer_1273 b2639539a132263179f6ff50f7245e2b 79 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 5 52 6.8E-17 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 Afer_1273 b2639539a132263179f6ff50f7245e2b 79 Gene3D G3DSA:1.10.1660.10 3 54 1.3E-12 T 14-10-2018 Afer_0680 e211034cbe91fe697b62e2bf7b775e8e 234 SUPERFAMILY SSF102588 14 207 4.97E-40 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Afer_0680 e211034cbe91fe697b62e2bf7b775e8e 234 Pfam PF02585 GlcNAc-PI de-N-acetylase 15 140 3.6E-23 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 Afer_0680 e211034cbe91fe697b62e2bf7b775e8e 234 Gene3D G3DSA:3.40.50.10320 3 219 7.7E-51 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 Afer_0186 d2704032d1768e24b7ca3b5de4aebe8f 166 Gene3D G3DSA:3.40.630.30 5 151 8.1E-22 T 14-10-2018 Afer_0186 d2704032d1768e24b7ca3b5de4aebe8f 166 SUPERFAMILY SSF55729 8 144 1.9E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_0186 d2704032d1768e24b7ca3b5de4aebe8f 166 Pfam PF13302 Acetyltransferase (GNAT) domain 20 142 3.0E-13 T 14-10-2018 IPR000182 GNAT domain Afer_0132 04f51a5810527a89383f1e6ac489153a 781 SMART SM00327 588 779 1.2E-17 T 14-10-2018 IPR002035 von Willebrand factor, type A Afer_0132 04f51a5810527a89383f1e6ac489153a 781 SUPERFAMILY SSF53300 590 775 2.38E-22 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Afer_0132 04f51a5810527a89383f1e6ac489153a 781 Pfam PF00092 von Willebrand factor type A domain 593 746 2.0E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A Afer_0132 04f51a5810527a89383f1e6ac489153a 781 Gene3D G3DSA:3.40.50.410 587 760 8.5E-17 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Afer_1551 ac5b3a45a7b03ae066dd48c02f0990ee 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 97 3.8E-17 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Afer_1551 ac5b3a45a7b03ae066dd48c02f0990ee 100 SUPERFAMILY SSF141000 5 95 8.89E-17 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 Afer_1551 ac5b3a45a7b03ae066dd48c02f0990ee 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 4 97 16.673 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Afer_1551 ac5b3a45a7b03ae066dd48c02f0990ee 100 Gene3D G3DSA:1.10.20.60 2 95 1.4E-14 T 14-10-2018 Afer_1551 ac5b3a45a7b03ae066dd48c02f0990ee 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 86 9.5E-9 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 Afer_0864 a80be57f89f70e56b9e87ab069d23030 271 Gene3D G3DSA:3.90.550.10 9 243 1.4E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0864 a80be57f89f70e56b9e87ab069d23030 271 Pfam PF00535 Glycosyl transferase family 2 11 176 1.3E-28 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_0864 a80be57f89f70e56b9e87ab069d23030 271 SUPERFAMILY SSF53448 11 221 1.34E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1285 8a8b0e07481b3541409b5e1e2b2f42eb 289 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 206 216 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 Afer_1285 8a8b0e07481b3541409b5e1e2b2f42eb 289 Gene3D G3DSA:3.90.190.10 71 284 5.8E-39 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Afer_1285 8a8b0e07481b3541409b5e1e2b2f42eb 289 Pfam PF13350 Tyrosine phosphatase family 71 272 1.7E-37 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type Afer_1285 8a8b0e07481b3541409b5e1e2b2f42eb 289 SUPERFAMILY SSF52799 71 255 4.06E-30 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like Afer_0955 1e2cb548e1ccadd88d621ed821bca8bf 372 Pfam PF04012 PspA/IM30 family 2 231 1.8E-28 T 14-10-2018 IPR007157 PspA/IM30 Afer_1965 7a84c31e5bc14db51e5e7beb68daebac 391 SUPERFAMILY SSF51556 9 384 2.62E-8 T 14-10-2018 IPR032466 Metal-dependent hydrolase Afer_1965 7a84c31e5bc14db51e5e7beb68daebac 391 Gene3D G3DSA:3.20.20.140 8 386 4.5E-84 T 14-10-2018 Afer_0209 64d46090c46b87c063588e826fc6f449 301 SUPERFAMILY SSF64518 1 300 5.23E-37 T 14-10-2018 Afer_0209 64d46090c46b87c063588e826fc6f449 301 Gene3D G3DSA:1.20.1330.10 42 270 2.1E-25 T 14-10-2018 Afer_0209 64d46090c46b87c063588e826fc6f449 301 Pfam PF00669 Bacterial flagellin N-terminal helical region 9 140 2.4E-12 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Afer_1194 7f5c84818f23fc8f6358c5d3a1a668dd 393 ProSitePatterns PS00571 Amidases signature. 102 133 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Afer_1194 7f5c84818f23fc8f6358c5d3a1a668dd 393 Pfam PF01425 Amidase 243 359 2.2E-6 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1194 7f5c84818f23fc8f6358c5d3a1a668dd 393 Pfam PF01425 Amidase 24 173 5.0E-50 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1194 7f5c84818f23fc8f6358c5d3a1a668dd 393 SUPERFAMILY SSF75304 24 371 1.44E-74 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1194 7f5c84818f23fc8f6358c5d3a1a668dd 393 Gene3D G3DSA:3.90.1300.10 197 369 2.2E-19 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1194 7f5c84818f23fc8f6358c5d3a1a668dd 393 Gene3D G3DSA:3.90.1300.10 22 186 1.1E-57 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_0229 54b5bd1752852c413901d885558d8419 301 Pfam PF00892 EamA-like transporter family 152 283 3.2E-13 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_0229 54b5bd1752852c413901d885558d8419 301 Pfam PF00892 EamA-like transporter family 16 143 1.2E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_0229 54b5bd1752852c413901d885558d8419 301 SUPERFAMILY SSF103481 43 146 2.35E-5 T 14-10-2018 Afer_0229 54b5bd1752852c413901d885558d8419 301 SUPERFAMILY SSF103481 209 289 7.85E-7 T 14-10-2018 Afer_1953 ae2be689eb84b428b6fc231a67ad05a0 217 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 2 217 36.944 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1953 ae2be689eb84b428b6fc231a67ad05a0 217 PIRSF PIRSF001586 2 209 2.0E-73 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1953 ae2be689eb84b428b6fc231a67ad05a0 217 Gene3D G3DSA:3.40.50.880 2 211 4.6E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1953 ae2be689eb84b428b6fc231a67ad05a0 217 SUPERFAMILY SSF52317 4 201 4.44E-65 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1953 ae2be689eb84b428b6fc231a67ad05a0 217 SMART SM01211 2 208 8.3E-93 T 14-10-2018 Afer_1953 ae2be689eb84b428b6fc231a67ad05a0 217 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 4 202 6.4E-77 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1953 ae2be689eb84b428b6fc231a67ad05a0 217 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 3 199 3.9E-39 T 14-10-2018 Afer_1245 d667af8b2ffc84ad55b878842d8b7bb7 350 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 7 133 1.3E-10 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1245 d667af8b2ffc84ad55b878842d8b7bb7 350 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 180 329 1.3E-21 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 Afer_1245 d667af8b2ffc84ad55b878842d8b7bb7 350 Gene3D G3DSA:3.40.50.2000 158 333 1.8E-63 T 14-10-2018 Afer_1245 d667af8b2ffc84ad55b878842d8b7bb7 350 SUPERFAMILY SSF53756 6 348 4.94E-57 T 14-10-2018 Afer_1245 d667af8b2ffc84ad55b878842d8b7bb7 350 Gene3D G3DSA:3.40.50.2000 8 339 1.8E-63 T 14-10-2018 Afer_0699 78095369a4c6ee1823ebbd31765a2291 456 Pfam PF01266 FAD dependent oxidoreductase 29 391 2.1E-40 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Afer_0699 78095369a4c6ee1823ebbd31765a2291 456 Gene3D G3DSA:3.50.50.60 29 391 7.3E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0699 78095369a4c6ee1823ebbd31765a2291 456 SUPERFAMILY SSF51905 7 306 1.08E-29 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0699 78095369a4c6ee1823ebbd31765a2291 456 Gene3D G3DSA:3.30.9.10 124 353 7.3E-51 T 14-10-2018 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 Pfam PF02040 Arsenical pump membrane protein 13 433 3.5E-157 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 PRINTS PR00758 Arsenical pump membrane protein signature 153 177 3.4E-105 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 PRINTS PR00758 Arsenical pump membrane protein signature 226 251 3.4E-105 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 PRINTS PR00758 Arsenical pump membrane protein signature 406 430 3.4E-105 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 PRINTS PR00758 Arsenical pump membrane protein signature 186 209 3.4E-105 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 PRINTS PR00758 Arsenical pump membrane protein signature 373 398 3.4E-105 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 PRINTS PR00758 Arsenical pump membrane protein signature 332 354 3.4E-105 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 PRINTS PR00758 Arsenical pump membrane protein signature 110 134 3.4E-105 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 PRINTS PR00758 Arsenical pump membrane protein signature 287 311 3.4E-105 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_1857 559f70ccdde7cdb2d4935fc8eca08956 438 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 12 435 3.7E-182 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 Afer_0373 46a1849b86c546088769596cd6baa284 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 7 95 4.2E-22 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like Afer_0373 46a1849b86c546088769596cd6baa284 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 20.295 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 2 420 4.0E-126 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 Gene3D G3DSA:1.10.275.10 1 97 1.1E-19 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 PRINTS PR00149 Fumarate lyase superfamily signature 93 111 3.0E-24 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 PRINTS PR00149 Fumarate lyase superfamily signature 220 247 3.0E-24 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 PRINTS PR00149 Fumarate lyase superfamily signature 265 281 3.0E-24 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 3.0E-24 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 ProSitePatterns PS00163 Fumarate lyases signature. 265 274 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 Gene3D G3DSA:1.10.40.30 353 433 2.8E-17 T 14-10-2018 Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 Gene3D G3DSA:1.20.200.10 98 352 1.4E-83 T 14-10-2018 Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 Pfam PF00206 Lyase 63 286 3.4E-45 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 Pfam PF10397 Adenylosuccinate lyase C-terminus 354 429 7.2E-16 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 SMART SM00998 353 431 1.5E-20 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 Afer_1956 0a4e6d5cb00146a31f2531a0360fa6d7 434 SUPERFAMILY SSF48557 3 423 1.45E-111 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Afer_1825 a951a9f69819f001b8292ef415ec9b70 522 Gene3D G3DSA:1.20.810.10 4 446 1.2E-95 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 Afer_1825 a951a9f69819f001b8292ef415ec9b70 522 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 114 287 5.9E-59 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 Afer_1825 a951a9f69819f001b8292ef415ec9b70 522 SUPERFAMILY SSF81342 15 291 1.73E-63 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 Afer_0978 714bd85080daa4da1bff0730a7846b64 276 Pfam PF13276 HTH-like domain 34 85 7.6E-19 T 14-10-2018 IPR025948 HTH-like domain Afer_0978 714bd85080daa4da1bff0730a7846b64 276 Pfam PF00665 Integrase core domain 110 223 1.5E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0978 714bd85080daa4da1bff0730a7846b64 276 SUPERFAMILY SSF53098 104 266 3.64E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0978 714bd85080daa4da1bff0730a7846b64 276 Gene3D G3DSA:3.30.420.10 118 257 1.4E-10 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1647 b930dec7d760c37022086faeb03e9a10 120 SMART SM00857 8 118 2.3E-12 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Afer_1647 b930dec7d760c37022086faeb03e9a10 120 Gene3D G3DSA:3.40.50.1390 7 120 2.6E-25 T 14-10-2018 Afer_1647 b930dec7d760c37022086faeb03e9a10 120 Pfam PF00239 Resolvase, N terminal domain 8 119 1.4E-18 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Afer_1647 b930dec7d760c37022086faeb03e9a10 120 SUPERFAMILY SSF53041 7 119 5.75E-24 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Afer_1071 ce70ad2fcbe08fc86500381d40e101ba 507 SUPERFAMILY SSF52743 166 504 5.89E-62 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Afer_1071 ce70ad2fcbe08fc86500381d40e101ba 507 Gene3D G3DSA:3.40.50.200 160 506 2.2E-107 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 Afer_1071 ce70ad2fcbe08fc86500381d40e101ba 507 SUPERFAMILY SSF54897 5 155 4.08E-29 T 14-10-2018 Afer_1071 ce70ad2fcbe08fc86500381d40e101ba 507 Pfam PF00082 Subtilase family 244 450 2.5E-5 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 Afer_1071 ce70ad2fcbe08fc86500381d40e101ba 507 SMART SM00944 17 145 2.7E-23 T 14-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 Afer_1071 ce70ad2fcbe08fc86500381d40e101ba 507 Pfam PF09286 Pro-kumamolisin, activation domain 52 144 1.6E-6 T 14-10-2018 IPR015366 Peptidase S53, activation domain GO:0008236 Reactome: R-HSA-381038 Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 SUPERFAMILY SSF47384 262 339 3.73E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 Pfam PF13493 Domain of unknown function (DUF4118) 17 121 5.3E-17 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 Gene3D G3DSA:1.20.120.620 11 115 2.6E-10 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 SMART SM00387 382 488 2.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 SMART SM00388 271 339 5.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 Gene3D G3DSA:3.30.565.10 344 486 6.0E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 Gene3D G3DSA:1.10.287.130 262 343 3.4E-12 T 14-10-2018 Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 Pfam PF00512 His Kinase A (phospho-acceptor) domain 275 339 1.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 382 485 1.8E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase Afer_1174 938b10b8e2c042de36d20b22c4010c05 488 SUPERFAMILY SSF55874 328 486 3.01E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1361 887d25861911b110a8f5422e70c630ba 363 Gene3D G3DSA:3.30.465.40 1 177 2.6E-28 T 14-10-2018 Afer_1361 887d25861911b110a8f5422e70c630ba 363 SUPERFAMILY SSF56176 2 168 5.45E-30 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_1361 887d25861911b110a8f5422e70c630ba 363 Pfam PF01565 FAD binding domain 2 129 6.5E-18 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Afer_0598 605d1cc21601cd0e2e89c150dbe31572 526 Pfam PF02875 Mur ligase family, glutamate ligase domain 397 472 1.6E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Afer_0598 605d1cc21601cd0e2e89c150dbe31572 526 Gene3D G3DSA:3.40.1190.10 162 384 6.5E-42 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_0598 605d1cc21601cd0e2e89c150dbe31572 526 SUPERFAMILY SSF53244 396 517 4.03E-17 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_0598 605d1cc21601cd0e2e89c150dbe31572 526 SUPERFAMILY SSF53623 178 384 7.2E-35 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_0598 605d1cc21601cd0e2e89c150dbe31572 526 Pfam PF08245 Mur ligase middle domain 183 365 3.2E-26 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Afer_0598 605d1cc21601cd0e2e89c150dbe31572 526 Gene3D G3DSA:3.90.190.20 387 518 2.1E-15 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1193 5cd59580a18e52ae291826f7e9e26f02 394 Gene3D G3DSA:3.40.50.10540 17 336 1.3E-126 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Afer_1193 5cd59580a18e52ae291826f7e9e26f02 394 SUPERFAMILY SSF89796 15 389 1.96E-120 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Afer_1193 5cd59580a18e52ae291826f7e9e26f02 394 Gene3D G3DSA:3.30.1540.10 236 327 1.3E-126 T 14-10-2018 Afer_1193 5cd59580a18e52ae291826f7e9e26f02 394 Pfam PF02515 CoA-transferase family III 17 379 1.3E-125 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Afer_1094 c73738399a957e1676c537f32cf1ff58 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 18 239 5.0E-61 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Afer_1094 c73738399a957e1676c537f32cf1ff58 269 Pfam PF00290 Tryptophan synthase alpha chain 13 238 2.2E-70 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Afer_1094 c73738399a957e1676c537f32cf1ff58 269 SUPERFAMILY SSF51366 4 240 2.9E-71 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Afer_1094 c73738399a957e1676c537f32cf1ff58 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 255 31.281 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 Afer_1094 c73738399a957e1676c537f32cf1ff58 269 Gene3D G3DSA:3.20.20.70 3 261 7.6E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1299 b134e1260789ee57a6d4c9058995ad2c 239 Gene3D G3DSA:3.10.520.20 1 88 3.1E-9 T 14-10-2018 Afer_1299 b134e1260789ee57a6d4c9058995ad2c 239 SUPERFAMILY SSF143631 4 226 2.62E-37 T 14-10-2018 IPR003374 ApbE-like superfamily Afer_1299 b134e1260789ee57a6d4c9058995ad2c 239 Gene3D G3DSA:3.10.520.20 89 235 2.9E-19 T 14-10-2018 Afer_1299 b134e1260789ee57a6d4c9058995ad2c 239 Pfam PF02424 ApbE family 9 86 1.9E-6 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Afer_1299 b134e1260789ee57a6d4c9058995ad2c 239 Pfam PF02424 ApbE family 90 210 1.3E-16 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Afer_0756 1301004fb37c396a7b5828df0166aefa 190 Pfam PF01569 PAP2 superfamily 67 175 2.6E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Afer_0756 1301004fb37c396a7b5828df0166aefa 190 SMART SM00014 66 172 2.8E-14 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Afer_0756 1301004fb37c396a7b5828df0166aefa 190 SUPERFAMILY SSF48317 8 177 1.06E-30 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Afer_0756 1301004fb37c396a7b5828df0166aefa 190 Gene3D G3DSA:1.20.144.10 96 188 3.0E-18 T 14-10-2018 Afer_2008 e9dce9dd855120f7aa785b45aa5de42c 148 Gene3D G3DSA:1.10.1660.10 1 124 2.8E-34 T 14-10-2018 Afer_2008 e9dce9dd855120f7aa785b45aa5de42c 148 SUPERFAMILY SSF46955 1 121 1.14E-33 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily Afer_2008 e9dce9dd855120f7aa785b45aa5de42c 148 Pfam PF09278 MerR, DNA binding 46 106 3.1E-18 T 14-10-2018 IPR015358 Transcription regulator MerR, DNA binding Afer_2008 e9dce9dd855120f7aa785b45aa5de42c 148 SMART SM00422 1 70 2.2E-25 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_2008 e9dce9dd855120f7aa785b45aa5de42c 148 Pfam PF00376 MerR family regulatory protein 2 39 1.2E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_2008 e9dce9dd855120f7aa785b45aa5de42c 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 2.1E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_2008 e9dce9dd855120f7aa785b45aa5de42c 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 2.1E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_2008 e9dce9dd855120f7aa785b45aa5de42c 148 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.1E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 SUPERFAMILY SSF52467 185 354 1.23E-61 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 SUPERFAMILY SSF52518 1 179 6.13E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 424 443 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 387 536 1.8E-49 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 Gene3D G3DSA:3.40.50.970 1 172 6.5E-70 T 14-10-2018 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 2.3E-59 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 327 1.0E-50 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 Gene3D G3DSA:3.40.50.970 361 564 1.7E-71 T 14-10-2018 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 3 559 5.5E-239 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 Gene3D G3DSA:3.40.50.1220 186 352 1.0E-63 T 14-10-2018 Afer_1547 f9a061249f71bb8be377f59bbd224c44 569 SUPERFAMILY SSF52518 366 561 1.97E-69 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_0240 272334000d0e18ec5b30f0584977b26a 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 15 120 1.7E-36 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 Afer_0240 272334000d0e18ec5b30f0584977b26a 120 SUPERFAMILY SSF89360 14 110 1.08E-27 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Afer_0240 272334000d0e18ec5b30f0584977b26a 120 Gene3D G3DSA:2.60.300.12 14 120 2.5E-34 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 Afer_0240 272334000d0e18ec5b30f0584977b26a 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 15 116 2.0E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 Afer_0240 272334000d0e18ec5b30f0584977b26a 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 102 119 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 Afer_1841 8fa76e24294609c0b9d258c91fed938a 265 PIRSF PIRSF006661 1 250 5.4E-64 T 14-10-2018 IPR005232 Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase LarE GO:0016783 Afer_1841 8fa76e24294609c0b9d258c91fed938a 265 Gene3D G3DSA:3.40.50.620 1 201 2.9E-15 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_1841 8fa76e24294609c0b9d258c91fed938a 265 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 1 178 6.8E-5 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 Afer_1841 8fa76e24294609c0b9d258c91fed938a 265 SUPERFAMILY SSF52402 1 200 1.23E-23 T 14-10-2018 Afer_0089 d1fac45a0ed644336f27f301a93d3b34 493 SUPERFAMILY SSF56519 74 111 5.62E-5 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 Afer_0089 d1fac45a0ed644336f27f301a93d3b34 493 Gene3D G3DSA:3.40.710.10 135 481 1.2E-113 T 14-10-2018 Afer_0089 d1fac45a0ed644336f27f301a93d3b34 493 Gene3D G3DSA:3.90.1310.10 58 377 1.2E-113 T 14-10-2018 Afer_0089 d1fac45a0ed644336f27f301a93d3b34 493 Pfam PF00905 Penicillin binding protein transpeptidase domain 153 482 2.9E-57 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 Afer_0089 d1fac45a0ed644336f27f301a93d3b34 493 SUPERFAMILY SSF56601 136 489 1.57E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Afer_1605 843bd709cc3a77afd29e310ecb4fecfc 253 Pfam PF02517 CAAX protease self-immunity 146 239 2.6E-17 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 Afer_0889 3ab20684e8dd18c0ac499459577f94d3 487 Pfam PF01266 FAD dependent oxidoreductase 58 413 4.8E-42 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 Afer_0889 3ab20684e8dd18c0ac499459577f94d3 487 SUPERFAMILY SSF51905 33 334 7.45E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0889 3ab20684e8dd18c0ac499459577f94d3 487 Gene3D G3DSA:3.50.50.60 58 418 7.9E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0889 3ab20684e8dd18c0ac499459577f94d3 487 Gene3D G3DSA:3.30.9.10 152 384 7.9E-48 T 14-10-2018 Afer_0839 4a5ea8a05253c0f0ec76b5ddc940e47f 153 SUPERFAMILY SSF54637 11 149 1.59E-36 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_0839 4a5ea8a05253c0f0ec76b5ddc940e47f 153 Pfam PF01575 MaoC like domain 16 132 2.7E-26 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Afer_0839 4a5ea8a05253c0f0ec76b5ddc940e47f 153 Gene3D G3DSA:3.10.129.10 4 152 2.2E-48 T 14-10-2018 Afer_0330 dae99cf58a670784350a29bd7b40641a 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 2.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_0330 dae99cf58a670784350a29bd7b40641a 233 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_0330 dae99cf58a670784350a29bd7b40641a 233 SUPERFAMILY SSF46689 7 88 1.74E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0330 dae99cf58a670784350a29bd7b40641a 233 ProSitePatterns PS01081 TetR-type HTH domain signature. 31 61 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site Afer_0330 dae99cf58a670784350a29bd7b40641a 233 Gene3D G3DSA:1.10.357.10 2 210 4.9E-40 T 14-10-2018 Afer_0330 dae99cf58a670784350a29bd7b40641a 233 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 6.3E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_0476 1169572c23b8c61322d8e51affcf5810 527 Pfam PF01566 Natural resistance-associated macrophage protein 59 410 6.3E-71 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 Afer_0786 704f35cc3b840392fabbe63c54b0145e 286 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 70 274 6.4E-71 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 Afer_0786 704f35cc3b840392fabbe63c54b0145e 286 Gene3D G3DSA:3.90.850.10 64 281 4.1E-84 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Afer_0786 704f35cc3b840392fabbe63c54b0145e 286 SUPERFAMILY SSF56529 58 275 3.14E-76 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 Afer_1827 5336ad6d1252142d3cf109ec27451c6d 280 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 159 233 7.1E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1827 5336ad6d1252142d3cf109ec27451c6d 280 Gene3D G3DSA:1.10.760.10 60 147 1.5E-11 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Afer_1827 5336ad6d1252142d3cf109ec27451c6d 280 SUPERFAMILY SSF46626 20 147 4.87E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Afer_1827 5336ad6d1252142d3cf109ec27451c6d 280 SUPERFAMILY SSF46626 152 241 1.55E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Afer_1827 5336ad6d1252142d3cf109ec27451c6d 280 Pfam PF00034 Cytochrome c 70 144 6.2E-9 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1827 5336ad6d1252142d3cf109ec27451c6d 280 Gene3D G3DSA:1.10.760.10 159 242 3.1E-16 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 6 392 1.4E-168 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 Gene3D G3DSA:3.30.300.10 11 280 2.4E-163 T 14-10-2018 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 243 382 2.2E-66 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 269 277 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 PIRSF PIRSF000497 1 394 5.1E-162 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.6E-43 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 Gene3D G3DSA:3.30.300.10 102 384 2.4E-163 T 14-10-2018 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 SUPERFAMILY SSF55973 120 241 1.29E-41 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 SUPERFAMILY SSF55973 3 107 5.1E-46 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 Pfam PF02772 S-adenosylmethionine synthetase, central domain 124 241 2.7E-39 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 SUPERFAMILY SSF55973 243 394 1.45E-66 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 Gene3D G3DSA:3.30.300.10 6 243 2.4E-163 T 14-10-2018 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 125 135 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_1692 e6f81fd4bdfe2f3e03143455960c9e81 397 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 393 56.254 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 Afer_0989 0b021fbe60382f1718c573850bd3aa46 922 SMART SM00487 294 534 6.5E-10 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain Afer_0989 0b021fbe60382f1718c573850bd3aa46 922 Gene3D G3DSA:3.40.50.300 539 693 7.3E-9 T 14-10-2018 Afer_0989 0b021fbe60382f1718c573850bd3aa46 922 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 316 680 8.1E-62 T 14-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core Afer_0989 0b021fbe60382f1718c573850bd3aa46 922 Pfam PF00270 DEAD/DEAH box helicase 300 501 1.6E-10 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 Afer_0989 0b021fbe60382f1718c573850bd3aa46 922 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 40 243 4.7E-26 T 14-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain Afer_0989 0b021fbe60382f1718c573850bd3aa46 922 Gene3D G3DSA:3.40.50.300 288 510 6.5E-16 T 14-10-2018 Afer_0989 0b021fbe60382f1718c573850bd3aa46 922 Gene3D G3DSA:1.10.3210.30 16 283 1.7E-62 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily Afer_0989 0b021fbe60382f1718c573850bd3aa46 922 SUPERFAMILY SSF52540 311 678 9.92E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0658 82f2e11392bb4352722159904737ab55 425 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 204 224 5.3E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0658 82f2e11392bb4352722159904737ab55 425 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 271 289 5.3E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0658 82f2e11392bb4352722159904737ab55 425 PIRSF PIRSF006809 3 418 1.3E-139 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Afer_0658 82f2e11392bb4352722159904737ab55 425 SUPERFAMILY SSF52540 203 387 8.36E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0658 82f2e11392bb4352722159904737ab55 425 Pfam PF13167 GTP-binding GTPase N-terminal 28 116 1.0E-29 T 14-10-2018 IPR025121 GTPase HflX, N-terminal Afer_0658 82f2e11392bb4352722159904737ab55 425 Gene3D G3DSA:3.40.50.300 202 369 1.1E-39 T 14-10-2018 Afer_0658 82f2e11392bb4352722159904737ab55 425 Pfam PF01926 50S ribosome-binding GTPase 203 322 1.7E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 Afer_0658 82f2e11392bb4352722159904737ab55 425 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 12 359 3.5E-128 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Afer_0658 82f2e11392bb4352722159904737ab55 425 Gene3D G3DSA:3.40.50.11060 21 143 4.2E-37 T 14-10-2018 Afer_0658 82f2e11392bb4352722159904737ab55 425 Hamap MF_00900 GTPase HflX [hflX]. 31 389 45.828 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 Afer_0658 82f2e11392bb4352722159904737ab55 425 Pfam PF16360 GTP-binding GTPase Middle Region 119 196 9.5E-24 T 14-10-2018 IPR032305 GTP-binding protein, middle domain Afer_0372 7b633516c6020043d798c2d5c84e9f0f 192 Gene3D G3DSA:1.20.120.1200 7 174 2.9E-38 T 14-10-2018 Afer_0372 7b633516c6020043d798c2d5c84e9f0f 192 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 24 171 4.3E-33 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0079 2a3d301758b0cb4c226006ebdbe4d3de 145 SUPERFAMILY SSF51735 8 136 1.07E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0079 2a3d301758b0cb4c226006ebdbe4d3de 145 Gene3D G3DSA:3.40.50.720 4 142 5.4E-35 T 14-10-2018 Afer_0079 2a3d301758b0cb4c226006ebdbe4d3de 145 SMART SM00881 13 107 1.5E-17 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Afer_0079 2a3d301758b0cb4c226006ebdbe4d3de 145 Pfam PF13380 CoA binding domain 18 129 1.3E-35 T 14-10-2018 IPR003781 CoA-binding GO:0048037 Afer_1687 8d0d5e089a406ffd3f8bc5c6e24b7314 296 Gene3D G3DSA:3.10.25.10 212 289 2.6E-7 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Afer_1687 8d0d5e089a406ffd3f8bc5c6e24b7314 296 SUPERFAMILY SSF50486 192 283 2.75E-9 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 Afer_1687 8d0d5e089a406ffd3f8bc5c6e24b7314 296 Pfam PF02911 Formyl transferase, C-terminal domain 190 281 3.1E-7 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Afer_1687 8d0d5e089a406ffd3f8bc5c6e24b7314 296 Pfam PF00551 Formyl transferase 1 158 4.5E-24 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Afer_1687 8d0d5e089a406ffd3f8bc5c6e24b7314 296 SUPERFAMILY SSF53328 1 170 2.35E-34 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 Afer_1687 8d0d5e089a406ffd3f8bc5c6e24b7314 296 Gene3D G3DSA:3.40.50.170 1 190 4.2E-39 T 14-10-2018 Afer_1630 555be65bea69dbc739388f123a4d9d94 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 238 3.6E-55 T 14-10-2018 Afer_1630 555be65bea69dbc739388f123a4d9d94 248 SUPERFAMILY SSF51735 6 240 4.69E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 5.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 5.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 5.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 5.6E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1630 555be65bea69dbc739388f123a4d9d94 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 185 0.001 T 14-10-2018 Afer_1630 555be65bea69dbc739388f123a4d9d94 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Afer_1630 555be65bea69dbc739388f123a4d9d94 248 Gene3D G3DSA:3.40.50.720 1 242 1.4E-68 T 14-10-2018 Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 1.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 1.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1630 555be65bea69dbc739388f123a4d9d94 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.8E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1373 4f0788968a44c7058fd0ef0ccd179bdc 266 SUPERFAMILY SSF52096 14 265 4.59E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1373 4f0788968a44c7058fd0ef0ccd179bdc 266 Gene3D G3DSA:3.90.226.10 4 208 1.1E-51 T 14-10-2018 Afer_1373 4f0788968a44c7058fd0ef0ccd179bdc 266 Gene3D G3DSA:1.10.12.10 209 266 5.7E-14 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Afer_1373 4f0788968a44c7058fd0ef0ccd179bdc 266 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 264 2.9E-43 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_1566 f917a9deeb1e818dae1c3d280f6fe6e5 364 Pfam PF05762 VWA domain containing CoxE-like protein 136 349 1.0E-50 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like Afer_1566 f917a9deeb1e818dae1c3d280f6fe6e5 364 SMART SM00327 189 351 2.3E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A Afer_1566 f917a9deeb1e818dae1c3d280f6fe6e5 364 PIRSF PIRSF010256 2 74 1.0E-11 T 14-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 Afer_1566 f917a9deeb1e818dae1c3d280f6fe6e5 364 PIRSF PIRSF010256 86 360 2.6E-66 T 14-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 Afer_1566 f917a9deeb1e818dae1c3d280f6fe6e5 364 SUPERFAMILY SSF53300 188 317 1.13E-14 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Afer_1566 f917a9deeb1e818dae1c3d280f6fe6e5 364 Gene3D G3DSA:3.40.50.410 186 329 5.3E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Afer_1722 e38471469eb6a6e74b50aefe72e1bb5a 183 SUPERFAMILY SSF101874 13 182 2.62E-60 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Afer_1722 e38471469eb6a6e74b50aefe72e1bb5a 183 SMART SM00867 14 181 1.4E-76 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Afer_1722 e38471469eb6a6e74b50aefe72e1bb5a 183 Gene3D G3DSA:2.40.128.110 14 183 6.4E-59 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily Afer_1722 e38471469eb6a6e74b50aefe72e1bb5a 183 Pfam PF04264 YceI-like domain 15 179 1.4E-50 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like Afer_1559 02ee1a7188357735076d2d2d247b82cd 443 SUPERFAMILY SSF51690 134 417 3.97E-73 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 Afer_1559 02ee1a7188357735076d2d2d247b82cd 443 SUPERFAMILY SSF54675 3 132 1.9E-32 T 14-10-2018 Afer_1559 02ee1a7188357735076d2d2d247b82cd 443 Gene3D G3DSA:3.20.20.70 148 305 1.5E-42 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1559 02ee1a7188357735076d2d2d247b82cd 443 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 5 417 1.9E-109 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 Afer_1559 02ee1a7188357735076d2d2d247b82cd 443 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 150 338 1.8E-4 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Afer_1559 02ee1a7188357735076d2d2d247b82cd 443 Gene3D G3DSA:3.20.140.10 1 147 1.3E-36 T 14-10-2018 Afer_1559 02ee1a7188357735076d2d2d247b82cd 443 PIRSF PIRSF000484 1 425 1.9E-88 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 Afer_0266 3253a9f2956aebd57bf9f0ae3098bbbb 344 Pfam PF00248 Aldo/keto reductase family 16 314 1.8E-73 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Afer_0266 3253a9f2956aebd57bf9f0ae3098bbbb 344 SUPERFAMILY SSF51430 1 316 2.49E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Afer_0266 3253a9f2956aebd57bf9f0ae3098bbbb 344 PRINTS PR00069 Aldo-keto reductase signature 41 65 4.9E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Afer_0266 3253a9f2956aebd57bf9f0ae3098bbbb 344 PRINTS PR00069 Aldo-keto reductase signature 136 153 4.9E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Afer_0266 3253a9f2956aebd57bf9f0ae3098bbbb 344 PRINTS PR00069 Aldo-keto reductase signature 105 123 4.9E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 Afer_0266 3253a9f2956aebd57bf9f0ae3098bbbb 344 Gene3D G3DSA:3.20.20.100 1 325 2.0E-112 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Afer_1830 46105aa52a52bca906d2761e24bc6c19 356 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 9 344 41.356 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Afer_1830 46105aa52a52bca906d2761e24bc6c19 356 SUPERFAMILY SSF51726 11 344 1.24E-88 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Afer_1830 46105aa52a52bca906d2761e24bc6c19 356 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 12 341 1.2E-106 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Afer_1830 46105aa52a52bca906d2761e24bc6c19 356 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 25 34 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Afer_1830 46105aa52a52bca906d2761e24bc6c19 356 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 141 157 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Afer_1830 46105aa52a52bca906d2761e24bc6c19 356 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 11 342 3.7E-105 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 Afer_1830 46105aa52a52bca906d2761e24bc6c19 356 Gene3D G3DSA:3.20.20.210 3 351 1.3E-120 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 Afer_1342 dc156df3dc185f17e9026354f8deebc6 111 Pfam PF01909 Nucleotidyltransferase domain 16 98 3.5E-12 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 Afer_1342 dc156df3dc185f17e9026354f8deebc6 111 Gene3D G3DSA:3.30.460.10 5 100 7.7E-20 T 14-10-2018 Afer_1342 dc156df3dc185f17e9026354f8deebc6 111 SUPERFAMILY SSF81301 8 103 1.15E-18 T 14-10-2018 Afer_1501 0eb3475175ffe0ce107a19fd570c9d2b 83 SUPERFAMILY SSF54565 2 78 1.06E-27 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1501 0eb3475175ffe0ce107a19fd570c9d2b 83 Gene3D G3DSA:3.30.1320.10 1 83 6.2E-30 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1501 0eb3475175ffe0ce107a19fd570c9d2b 83 Pfam PF00886 Ribosomal protein S16 9 67 3.5E-21 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1501 0eb3475175ffe0ce107a19fd570c9d2b 83 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 77 3.3E-29 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1501 0eb3475175ffe0ce107a19fd570c9d2b 83 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_1501 0eb3475175ffe0ce107a19fd570c9d2b 83 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 22.427 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 1 322 9.2E-89 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 Pfam PF00579 tRNA synthetases class I (W and Y) 1 273 4.4E-67 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 136 157 1.7E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 189 199 1.7E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 61 80 1.7E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 11 27 1.7E-21 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 Gene3D G3DSA:1.10.240.10 180 290 9.5E-116 T 14-10-2018 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 Gene3D G3DSA:3.40.50.620 1 321 9.5E-116 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 323 35.201 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 Afer_0915 439e6f31423ca5add524a50cc89f6ed7 323 SUPERFAMILY SSF52374 1 322 1.37E-80 T 14-10-2018 Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 SUPERFAMILY SSF52540 326 533 1.1E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 SUPERFAMILY SSF90123 10 322 2.22E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 Gene3D G3DSA:3.40.50.300 332 550 1.4E-55 T 14-10-2018 Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 Gene3D G3DSA:1.20.1560.10 8 315 1.6E-12 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 7 528 3.9E-103 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 Pfam PF00005 ABC transporter 352 499 2.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 SMART SM00382 361 546 1.3E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0522 59a15555cafea9559bcd93da8ed1b3fc 553 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 365 378 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 Afer_0233 d14890996019a2217bf9755ba2a723e9 469 Gene3D G3DSA:3.30.70.360 204 376 1.6E-70 T 14-10-2018 Afer_0233 d14890996019a2217bf9755ba2a723e9 469 Pfam PF01546 Peptidase family M20/M25/M40 90 458 1.6E-15 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Afer_0233 d14890996019a2217bf9755ba2a723e9 469 SUPERFAMILY SSF53187 13 465 2.57E-40 T 14-10-2018 Afer_0233 d14890996019a2217bf9755ba2a723e9 469 Pfam PF07687 Peptidase dimerisation domain 211 363 2.7E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Afer_0233 d14890996019a2217bf9755ba2a723e9 469 Gene3D G3DSA:3.40.630.10 18 447 1.6E-70 T 14-10-2018 Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 TIGRFAM TIGR00115 tig: trigger factor 14 441 7.5E-64 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 SUPERFAMILY SSF102735 9 131 1.06E-23 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 Gene3D G3DSA:3.30.70.1050 3 130 2.8E-22 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 Gene3D G3DSA:1.10.3120.10 268 452 4.5E-20 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 SUPERFAMILY SSF54534 135 219 1.59E-9 T 14-10-2018 Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 285 439 2.9E-17 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 SUPERFAMILY SSF109998 273 451 6.28E-18 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 Pfam PF05697 Bacterial trigger factor protein (TF) 5 145 2.5E-26 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 Afer_0761 f16af912d090b54ca6cb74b7a83f75a3 502 Hamap MF_00303 Trigger factor [tig]. 2 450 14.125 T 14-10-2018 IPR005215 Trigger factor GO:0015031 Afer_1560 cb089df35554657d738a02c4769d3752 412 Gene3D G3DSA:3.40.710.10 20 410 1.3E-114 T 14-10-2018 Afer_1560 cb089df35554657d738a02c4769d3752 412 SUPERFAMILY SSF56601 19 396 8.8E-88 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like Afer_1560 cb089df35554657d738a02c4769d3752 412 Pfam PF00144 Beta-lactamase 26 398 1.6E-69 T 14-10-2018 IPR001466 Beta-lactamase-related Afer_0164 8d5c810e348e8d24d4ac3a5a09d6cc59 353 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 1 335 59.744 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Afer_0164 8d5c810e348e8d24d4ac3a5a09d6cc59 353 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 331 6.0E-95 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 Afer_0164 8d5c810e348e8d24d4ac3a5a09d6cc59 353 Pfam PF04055 Radical SAM superfamily 101 264 8.9E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_0164 8d5c810e348e8d24d4ac3a5a09d6cc59 353 SMART SM00729 96 306 0.0024 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_0164 8d5c810e348e8d24d4ac3a5a09d6cc59 353 PIRSF PIRSF006004 4 342 2.9E-105 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 Afer_0164 8d5c810e348e8d24d4ac3a5a09d6cc59 353 SUPERFAMILY SSF102114 94 304 3.79E-20 T 14-10-2018 Afer_0164 8d5c810e348e8d24d4ac3a5a09d6cc59 353 Gene3D G3DSA:3.20.20.70 60 320 1.2E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_0332 7967965e28f734a83420a81e6b612894 217 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 16 197 6.1E-40 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 Afer_0332 7967965e28f734a83420a81e6b612894 217 SUPERFAMILY SSF52540 9 210 4.02E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0332 7967965e28f734a83420a81e6b612894 217 Gene3D G3DSA:3.40.50.300 1 216 2.7E-47 T 14-10-2018 Afer_0332 7967965e28f734a83420a81e6b612894 217 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0332 7967965e28f734a83420a81e6b612894 217 Pfam PF00005 ABC transporter 23 161 1.4E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0332 7967965e28f734a83420a81e6b612894 217 SMART SM00382 30 210 1.1E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1437 ed4be292107adc37f35f31b01cfee283 520 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 424 4.2E-76 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 Afer_1437 ed4be292107adc37f35f31b01cfee283 520 Pfam PF07690 Major Facilitator Superfamily 20 412 2.7E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1437 ed4be292107adc37f35f31b01cfee283 520 SUPERFAMILY SSF103473 4 505 1.44E-67 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1437 ed4be292107adc37f35f31b01cfee283 520 Gene3D G3DSA:1.20.1720.10 17 207 1.4E-45 T 14-10-2018 Afer_1437 ed4be292107adc37f35f31b01cfee283 520 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Afer_0200 b99163884add1994c953d2959dce6648 242 SUPERFAMILY SSF46894 135 236 3.68E-32 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 Afer_0200 b99163884add1994c953d2959dce6648 242 Pfam PF00072 Response regulator receiver domain 13 122 2.5E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0200 b99163884add1994c953d2959dce6648 242 Gene3D G3DSA:1.10.10.10 140 241 5.8E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0200 b99163884add1994c953d2959dce6648 242 SMART SM00448 11 121 2.4E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0200 b99163884add1994c953d2959dce6648 242 Gene3D G3DSA:3.40.50.2300 2 139 5.8E-39 T 14-10-2018 Afer_0200 b99163884add1994c953d2959dce6648 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 235 2.4E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_0200 b99163884add1994c953d2959dce6648 242 SUPERFAMILY SSF52172 12 140 1.71E-42 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0200 b99163884add1994c953d2959dce6648 242 SMART SM00862 159 235 9.1E-32 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_1053 f7a24508aa40cc16ba82374dc0333dba 357 SUPERFAMILY SSF55681 4 248 2.49E-43 T 14-10-2018 Afer_1053 f7a24508aa40cc16ba82374dc0333dba 357 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 262 292 1.4E-5 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 Afer_1053 f7a24508aa40cc16ba82374dc0333dba 357 SUPERFAMILY SSF82649 261 292 1.52E-5 T 14-10-2018 Afer_1053 f7a24508aa40cc16ba82374dc0333dba 357 Gene3D G3DSA:3.30.930.10 4 253 1.4E-41 T 14-10-2018 Afer_1053 f7a24508aa40cc16ba82374dc0333dba 357 Pfam PF03099 Biotin/lipoate A/B protein ligase family 60 159 6.5E-6 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 Afer_1266 ac045eb959114b289feb07ae0cfe751f 241 Gene3D G3DSA:3.40.1180.10 2 232 1.9E-91 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Afer_1266 ac045eb959114b289feb07ae0cfe751f 241 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 13 238 39.02 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Afer_1266 ac045eb959114b289feb07ae0cfe751f 241 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 13 237 5.9E-75 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Afer_1266 ac045eb959114b289feb07ae0cfe751f 241 SUPERFAMILY SSF64005 8 232 7.72E-82 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 Afer_1266 ac045eb959114b289feb07ae0cfe751f 241 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 183 200 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 Afer_1266 ac045eb959114b289feb07ae0cfe751f 241 Pfam PF01255 Putative undecaprenyl diphosphate synthase 20 237 8.4E-78 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 Afer_1082 62b09c752c405b7bb503bb63fcce75ba 222 Pfam PF00753 Metallo-beta-lactamase superfamily 11 202 1.0E-17 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1082 62b09c752c405b7bb503bb63fcce75ba 222 SUPERFAMILY SSF56281 8 219 9.34E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1082 62b09c752c405b7bb503bb63fcce75ba 222 Gene3D G3DSA:3.60.15.10 5 220 1.8E-55 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1082 62b09c752c405b7bb503bb63fcce75ba 222 SMART SM00849 11 202 9.0E-32 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_0567 4ee996089a57f68bbf9b0fd64ddf17a3 416 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 221 240 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site Afer_0567 4ee996089a57f68bbf9b0fd64ddf17a3 416 Gene3D G3DSA:3.40.640.10 40 301 5.3E-152 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0567 4ee996089a57f68bbf9b0fd64ddf17a3 416 Gene3D G3DSA:3.90.1150.10 15 407 5.3E-152 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0567 4ee996089a57f68bbf9b0fd64ddf17a3 416 SUPERFAMILY SSF53383 10 413 1.67E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0567 4ee996089a57f68bbf9b0fd64ddf17a3 416 Pfam PF00266 Aminotransferase class-V 30 403 1.8E-130 T 14-10-2018 IPR000192 Aminotransferase class V domain Afer_0567 4ee996089a57f68bbf9b0fd64ddf17a3 416 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 13 414 4.8E-150 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 Afer_0216 bc010ddf624f51211ec42702b8d03ff9 290 SMART SM00345 13 71 8.5E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_0216 bc010ddf624f51211ec42702b8d03ff9 290 Gene3D G3DSA:1.20.120.530 75 218 9.4E-13 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Afer_0216 bc010ddf624f51211ec42702b8d03ff9 290 Gene3D G3DSA:1.10.10.10 5 72 8.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0216 bc010ddf624f51211ec42702b8d03ff9 290 SUPERFAMILY SSF46785 7 75 2.35E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0216 bc010ddf624f51211ec42702b8d03ff9 290 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 8.8E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_0216 bc010ddf624f51211ec42702b8d03ff9 290 Pfam PF07729 FCD domain 82 204 7.5E-11 T 14-10-2018 IPR011711 GntR, C-terminal Afer_0216 bc010ddf624f51211ec42702b8d03ff9 290 SUPERFAMILY SSF48008 77 213 2.56E-12 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal Afer_1984 80bf5ea60c0777797e0337fdbdfc0410 483 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 11 340 2.2E-90 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Afer_1984 80bf5ea60c0777797e0337fdbdfc0410 483 SMART SM01329 10 341 1.8E-146 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Afer_1984 80bf5ea60c0777797e0337fdbdfc0410 483 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 232 251 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 Afer_1984 80bf5ea60c0777797e0337fdbdfc0410 483 SUPERFAMILY SSF53659 9 345 6.4E-111 T 14-10-2018 Afer_1984 80bf5ea60c0777797e0337fdbdfc0410 483 Gene3D G3DSA:3.30.70.1570 375 483 3.5E-31 T 14-10-2018 Afer_1984 80bf5ea60c0777797e0337fdbdfc0410 483 Gene3D G3DSA:3.40.718.10 1 371 4.9E-127 T 14-10-2018 Afer_1984 80bf5ea60c0777797e0337fdbdfc0410 483 TIGRFAM TIGR02924 ICDH_alpha: isocitrate dehydrogenase 9 477 6.7E-207 T 14-10-2018 IPR014273 Isocitrate dehydrogenase, alphaproteobacteria-type GO:0004450|GO:0006097|GO:0006099|GO:0046872|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 Afer_0922 c08433e01ae59b9c3ceddd6152bf7d60 136 PRINTS PR00502 NUDIX hydrolase family signature 36 50 1.7E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Afer_0922 c08433e01ae59b9c3ceddd6152bf7d60 136 PRINTS PR00502 NUDIX hydrolase family signature 50 65 1.7E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 Afer_0922 c08433e01ae59b9c3ceddd6152bf7d60 136 Pfam PF00293 NUDIX domain 10 131 7.4E-21 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 Afer_0922 c08433e01ae59b9c3ceddd6152bf7d60 136 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 Afer_0922 c08433e01ae59b9c3ceddd6152bf7d60 136 SUPERFAMILY SSF55811 9 132 2.57E-27 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 Afer_0922 c08433e01ae59b9c3ceddd6152bf7d60 136 Gene3D G3DSA:3.90.79.10 8 132 2.3E-28 T 14-10-2018 Afer_0735 b26937fbd493e7139880ce3fb460b303 286 Gene3D G3DSA:3.90.25.10 160 276 1.1E-81 T 14-10-2018 Afer_0735 b26937fbd493e7139880ce3fb460b303 286 Gene3D G3DSA:3.40.50.720 5 270 1.1E-81 T 14-10-2018 Afer_0735 b26937fbd493e7139880ce3fb460b303 286 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 281 2.2E-72 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Afer_0735 b26937fbd493e7139880ce3fb460b303 286 SUPERFAMILY SSF51735 4 282 4.0E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0735 b26937fbd493e7139880ce3fb460b303 286 Pfam PF04321 RmlD substrate binding domain 4 282 1.6E-75 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 Afer_0703 1a39bbccabdd2aa99f2d6eb291f5e999 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 7.8E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_0703 1a39bbccabdd2aa99f2d6eb291f5e999 236 SUPERFAMILY SSF52172 1 169 2.65E-39 T 14-10-2018 IPR011006 CheY-like superfamily Afer_0703 1a39bbccabdd2aa99f2d6eb291f5e999 236 Gene3D G3DSA:3.40.50.2300 1 123 9.6E-36 T 14-10-2018 Afer_0703 1a39bbccabdd2aa99f2d6eb291f5e999 236 Gene3D G3DSA:1.10.10.10 124 230 1.2E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0703 1a39bbccabdd2aa99f2d6eb291f5e999 236 SMART SM00862 145 220 2.7E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 Afer_0703 1a39bbccabdd2aa99f2d6eb291f5e999 236 SMART SM00448 1 112 4.9E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0703 1a39bbccabdd2aa99f2d6eb291f5e999 236 Pfam PF00072 Response regulator receiver domain 4 113 3.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Afer_0292 89330996ec9f8d0467058efa27d67a62 303 SUPERFAMILY SSF52402 151 293 7.45E-33 T 14-10-2018 Afer_0292 89330996ec9f8d0467058efa27d67a62 303 Pfam PF00582 Universal stress protein family 1 138 1.6E-26 T 14-10-2018 IPR006016 UspA Afer_0292 89330996ec9f8d0467058efa27d67a62 303 Pfam PF00582 Universal stress protein family 151 291 1.4E-27 T 14-10-2018 IPR006016 UspA Afer_0292 89330996ec9f8d0467058efa27d67a62 303 Gene3D G3DSA:3.40.50.620 143 300 2.4E-38 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0292 89330996ec9f8d0467058efa27d67a62 303 Gene3D G3DSA:3.40.50.620 1 142 2.3E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_0292 89330996ec9f8d0467058efa27d67a62 303 SUPERFAMILY SSF52402 4 140 6.03E-30 T 14-10-2018 Afer_0292 89330996ec9f8d0467058efa27d67a62 303 PRINTS PR01438 Universal stress protein signature 251 263 3.8E-16 T 14-10-2018 IPR006015 Universal stress protein A Afer_0292 89330996ec9f8d0467058efa27d67a62 303 PRINTS PR01438 Universal stress protein signature 269 291 3.8E-16 T 14-10-2018 IPR006015 Universal stress protein A Afer_0292 89330996ec9f8d0467058efa27d67a62 303 PRINTS PR01438 Universal stress protein signature 149 167 3.8E-16 T 14-10-2018 IPR006015 Universal stress protein A Afer_1510 e5b89351949a174bff41c9fcfc3b8714 94 Gene3D G3DSA:1.10.1200.10 1 90 6.6E-21 T 14-10-2018 IPR036736 ACP-like superfamily Afer_1510 e5b89351949a174bff41c9fcfc3b8714 94 Hamap MF_01217 Acyl carrier protein [acpP]. 9 88 14.193 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 Afer_1510 e5b89351949a174bff41c9fcfc3b8714 94 Pfam PF00550 Phosphopantetheine attachment site 13 84 1.1E-10 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain Afer_1510 e5b89351949a174bff41c9fcfc3b8714 94 SUPERFAMILY SSF47336 5 88 4.06E-17 T 14-10-2018 IPR036736 ACP-like superfamily Afer_0813 c5ac67bc52bf92c97211f3135d222d06 322 SMART SM00849 34 223 2.1E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_0813 c5ac67bc52bf92c97211f3135d222d06 322 Gene3D G3DSA:3.60.15.10 18 240 6.3E-35 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_0813 c5ac67bc52bf92c97211f3135d222d06 322 Pfam PF00753 Metallo-beta-lactamase superfamily 57 222 1.1E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_0813 c5ac67bc52bf92c97211f3135d222d06 322 SUPERFAMILY SSF56281 12 311 7.28E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1425 83e8efb69cd4f3fa0904ed957200d27e 126 Gene3D G3DSA:3.40.50.1390 52 124 2.4E-8 T 14-10-2018 Afer_1425 83e8efb69cd4f3fa0904ed957200d27e 126 Pfam PF00239 Resolvase, N terminal domain 57 121 3.6E-8 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 Afer_1425 83e8efb69cd4f3fa0904ed957200d27e 126 SUPERFAMILY SSF53041 57 122 5.1E-10 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 Afer_0759 0a28b599e2b26d252e60730eb3c798f5 202 Pfam PF09335 SNARE associated Golgi protein 30 156 4.5E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein Afer_0856 0e24cbd994ece4d2232409303b2f0542 199 Pfam PF01914 MarC family integral membrane protein 4 196 1.1E-51 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Afer_0856 0e24cbd994ece4d2232409303b2f0542 199 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 194 8.8E-45 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 Afer_0656 65f3a1959dd264c331d2a0f5429fb086 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 13 300 18.532 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Afer_0656 65f3a1959dd264c331d2a0f5429fb086 310 Gene3D G3DSA:3.40.50.300 17 293 2.6E-54 T 14-10-2018 Afer_0656 65f3a1959dd264c331d2a0f5429fb086 310 Gene3D G3DSA:1.10.20.140 121 192 2.6E-54 T 14-10-2018 Afer_0656 65f3a1959dd264c331d2a0f5429fb086 310 SUPERFAMILY SSF52540 15 133 1.81E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0656 65f3a1959dd264c331d2a0f5429fb086 310 Pfam PF01715 IPP transferase 50 289 2.4E-42 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 Afer_1139 0a8d6b73abd38266e761dc5f5c2da137 209 SUPERFAMILY SSF48317 14 170 4.45E-19 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily Afer_1139 0a8d6b73abd38266e761dc5f5c2da137 209 SMART SM00014 62 167 1.8E-9 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Afer_1139 0a8d6b73abd38266e761dc5f5c2da137 209 Pfam PF01569 PAP2 superfamily 98 166 3.2E-12 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase Afer_1139 0a8d6b73abd38266e761dc5f5c2da137 209 Gene3D G3DSA:1.20.144.10 75 180 2.2E-13 T 14-10-2018 Afer_1441 e59f2106855f87138a908e88b6087aab 235 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 4 195 3.3E-32 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 Afer_1441 e59f2106855f87138a908e88b6087aab 235 SUPERFAMILY SSF52317 2 204 1.05E-24 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1441 e59f2106855f87138a908e88b6087aab 235 Gene3D G3DSA:3.40.50.880 14 207 1.4E-12 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 Gene3D G3DSA:3.30.43.10 6 87 3.3E-19 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 204 297 1.3E-24 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 298 1.7E-55 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 SUPERFAMILY SSF56176 22 204 2.58E-34 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 Pfam PF01565 FAD binding domain 39 164 3.0E-15 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 Gene3D G3DSA:3.90.78.10 217 307 4.2E-28 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 317 71.841 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 SUPERFAMILY SSF56194 197 299 6.02E-28 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 Afer_1243 ad58cde9b448488756bc8dabd0f00561 317 Gene3D G3DSA:3.30.465.10 94 214 2.2E-29 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Afer_1735 3f4918cc9a613c3fc20586b21303bf54 307 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 293 1.4E-84 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 Afer_1735 3f4918cc9a613c3fc20586b21303bf54 307 Pfam PF08338 Domain of unknown function (DUF1731) 248 295 1.1E-15 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 Afer_1735 3f4918cc9a613c3fc20586b21303bf54 307 SUPERFAMILY SSF51735 1 257 1.36E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1735 3f4918cc9a613c3fc20586b21303bf54 307 Gene3D G3DSA:3.40.50.720 1 287 2.4E-72 T 14-10-2018 Afer_1735 3f4918cc9a613c3fc20586b21303bf54 307 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 213 3.5E-12 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Afer_0609 b2443398e409461093ef3e510ba2ac4e 249 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 80 196 1.7E-10 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Afer_0609 b2443398e409461093ef3e510ba2ac4e 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Afer_0609 b2443398e409461093ef3e510ba2ac4e 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 159 179 1.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Afer_0609 b2443398e409461093ef3e510ba2ac4e 249 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 157 1.7E-5 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 Afer_0609 b2443398e409461093ef3e510ba2ac4e 249 SUPERFAMILY SSF56784 1 219 3.25E-37 T 14-10-2018 IPR036412 HAD-like superfamily Afer_0609 b2443398e409461093ef3e510ba2ac4e 249 Gene3D G3DSA:1.10.150.240 17 94 1.6E-62 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 Afer_0609 b2443398e409461093ef3e510ba2ac4e 249 Gene3D G3DSA:3.40.50.1000 5 213 1.6E-62 T 14-10-2018 IPR023214 HAD superfamily Afer_0609 b2443398e409461093ef3e510ba2ac4e 249 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 195 9.2E-17 T 14-10-2018 Afer_1203 fa370450f0026e03fc48873ac01e7098 537 Pfam PF05960 Bacterial protein of unknown function (DUF885) 16 529 1.9E-120 T 14-10-2018 IPR010281 Protein of unknown function DUF885 Afer_1052 d0b9176e169b8113e7f5a89767b56c24 366 Gene3D G3DSA:3.20.20.70 27 275 1.7E-18 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1052 d0b9176e169b8113e7f5a89767b56c24 366 SUPERFAMILY SSF102114 48 276 3.79E-26 T 14-10-2018 Afer_1052 d0b9176e169b8113e7f5a89767b56c24 366 Pfam PF04055 Radical SAM superfamily 57 228 7.0E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_1052 d0b9176e169b8113e7f5a89767b56c24 366 SMART SM00729 50 274 4.5E-14 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_1168 9bc60ed2a711cf190b90ee4ff14c3ca1 267 SUPERFAMILY SSF53335 6 266 1.18E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_1168 9bc60ed2a711cf190b90ee4ff14c3ca1 267 Gene3D G3DSA:3.40.50.150 2 252 3.7E-41 T 14-10-2018 Afer_1168 9bc60ed2a711cf190b90ee4ff14c3ca1 267 Pfam PF08241 Methyltransferase domain 41 138 1.6E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Afer_0364 1a9c340abf8324875f55d1ef32221264 180 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 7 150 43.278 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0364 1a9c340abf8324875f55d1ef32221264 180 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 10 151 1.4E-71 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0364 1a9c340abf8324875f55d1ef32221264 180 Gene3D G3DSA:3.40.50.12280 3 170 5.4E-76 T 14-10-2018 Afer_0364 1a9c340abf8324875f55d1ef32221264 180 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 37 144 6.4E-23 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0364 1a9c340abf8324875f55d1ef32221264 180 SUPERFAMILY SSF56770 9 154 1.83E-67 T 14-10-2018 Afer_1352 6c5fc97fe2e3857cdf1660c544c3615d 317 Hamap MF_00188 Protease HtpX [htpX]. 9 309 26.482 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 Afer_1352 6c5fc97fe2e3857cdf1660c544c3615d 317 Gene3D G3DSA:3.30.2010.10 71 159 1.3E-29 T 14-10-2018 Afer_1352 6c5fc97fe2e3857cdf1660c544c3615d 317 Pfam PF01435 Peptidase family M48 77 309 1.6E-32 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 PIRSF PIRSF016578 6 108 3.5E-6 T 14-10-2018 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 PIRSF PIRSF016578 137 388 1.0E-20 T 14-10-2018 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 383 7.8E-45 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 221 1.9E-25 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 SUPERFAMILY SSF56645 2 231 3.8E-71 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 10 116 2.9E-25 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 SUPERFAMILY SSF47203 233 386 1.26E-49 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 Gene3D G3DSA:2.40.110.10 120 237 2.7E-36 T 14-10-2018 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 Gene3D G3DSA:1.20.140.10 238 392 3.1E-47 T 14-10-2018 Afer_1471 61e5f31d3aec62835a4e9ec982d46628 401 Gene3D G3DSA:1.10.540.10 1 118 3.3E-32 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 Afer_1072 45419546fe7b57c98a9328f6c1dc5538 135 SUPERFAMILY SSF82784 15 131 1.09E-26 T 14-10-2018 IPR036102 OsmC/Ohr superfamily Afer_1072 45419546fe7b57c98a9328f6c1dc5538 135 Gene3D G3DSA:3.30.300.20 1 134 3.0E-28 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Afer_1072 45419546fe7b57c98a9328f6c1dc5538 135 Pfam PF02566 OsmC-like protein 30 129 3.0E-20 T 14-10-2018 IPR003718 OsmC/Ohr family Afer_0283 097efe2f6dbe8ade3ad220f6df2dda74 170 SUPERFAMILY SSF55961 18 164 2.28E-20 T 14-10-2018 Afer_0283 097efe2f6dbe8ade3ad220f6df2dda74 170 Gene3D G3DSA:3.30.530.20 4 169 2.0E-25 T 14-10-2018 IPR023393 START-like domain superfamily Afer_0283 097efe2f6dbe8ade3ad220f6df2dda74 170 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 24 163 1.9E-8 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase Afer_0913 4dc9e3e1012bb9a0e8e382547eb4a31b 176 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 167 3.5E-40 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Afer_0913 4dc9e3e1012bb9a0e8e382547eb4a31b 176 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 128 147 3.5E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Afer_0913 4dc9e3e1012bb9a0e8e382547eb4a31b 176 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 26 42 3.5E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Afer_0913 4dc9e3e1012bb9a0e8e382547eb4a31b 176 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 83 95 3.5E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 Afer_0913 4dc9e3e1012bb9a0e8e382547eb4a31b 176 SUPERFAMILY SSF51306 24 172 1.96E-46 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Afer_0913 4dc9e3e1012bb9a0e8e382547eb4a31b 176 Pfam PF10502 Signal peptidase, peptidase S26 60 165 4.8E-16 T 14-10-2018 IPR019533 Peptidase S26 Afer_0913 4dc9e3e1012bb9a0e8e382547eb4a31b 176 Gene3D G3DSA:2.10.109.10 34 167 5.6E-32 T 14-10-2018 Afer_1012 bdc12b3291df0a9f139bbf21d088fd03 285 Gene3D G3DSA:1.10.3210.10 5 266 3.1E-50 T 14-10-2018 Afer_1012 bdc12b3291df0a9f139bbf21d088fd03 285 SUPERFAMILY SSF109604 8 251 1.15E-44 T 14-10-2018 Afer_1012 bdc12b3291df0a9f139bbf21d088fd03 285 Pfam PF08668 HDOD domain 22 209 1.8E-38 T 14-10-2018 IPR013976 Metal-dependent hydrolase HDOD Afer_1011 23469b815d5a09db66f0109795a9928f 204 SUPERFAMILY SSF52540 3 189 3.11E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1011 23469b815d5a09db66f0109795a9928f 204 Gene3D G3DSA:3.40.50.300 1 197 1.7E-45 T 14-10-2018 Afer_1011 23469b815d5a09db66f0109795a9928f 204 Pfam PF01121 Dephospho-CoA kinase 4 178 7.8E-34 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Afer_1011 23469b815d5a09db66f0109795a9928f 204 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 17.817 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Afer_1011 23469b815d5a09db66f0109795a9928f 204 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 184 4.9E-28 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 Afer_0492 1db1c845b0e2a012e9af5ef575e6a6a3 267 Pfam PF13578 Methyltransferase domain 93 221 3.5E-16 T 14-10-2018 Afer_0492 1db1c845b0e2a012e9af5ef575e6a6a3 267 SUPERFAMILY SSF53335 67 232 3.5E-12 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0492 1db1c845b0e2a012e9af5ef575e6a6a3 267 Gene3D G3DSA:3.40.50.150 70 237 2.8E-15 T 14-10-2018 Afer_0158 a53f421bd6901ca9525c2783874d5afe 390 SUPERFAMILY SSF160544 238 344 7.46E-36 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Afer_0158 a53f421bd6901ca9525c2783874d5afe 390 Gene3D G3DSA:3.40.1690.10 212 352 3.8E-48 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal Afer_0158 a53f421bd6901ca9525c2783874d5afe 390 Pfam PF01312 FlhB HrpN YscU SpaS Family 5 341 1.4E-98 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Afer_0158 a53f421bd6901ca9525c2783874d5afe 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 222 239 3.7E-32 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Afer_0158 a53f421bd6901ca9525c2783874d5afe 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 7 29 3.7E-32 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Afer_0158 a53f421bd6901ca9525c2783874d5afe 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 266 281 3.7E-32 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Afer_0158 a53f421bd6901ca9525c2783874d5afe 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 202 220 3.7E-32 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Afer_0158 a53f421bd6901ca9525c2783874d5afe 390 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 296 317 3.7E-32 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 Afer_1405 d0876f7052af1511c1735d6984afbe7e 392 SUPERFAMILY SSF51905 125 246 8.29E-22 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1405 d0876f7052af1511c1735d6984afbe7e 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 290 3.7E-12 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_1405 d0876f7052af1511c1735d6984afbe7e 392 Gene3D G3DSA:3.50.50.60 5 311 3.2E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1405 d0876f7052af1511c1735d6984afbe7e 392 Gene3D G3DSA:3.50.50.60 107 255 3.2E-68 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1405 d0876f7052af1511c1735d6984afbe7e 392 SUPERFAMILY SSF51905 2 314 1.68E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1817 32df109f5175544109a43c28ab22e8d8 308 SUPERFAMILY SSF53448 10 224 1.61E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1817 32df109f5175544109a43c28ab22e8d8 308 Gene3D G3DSA:3.90.550.10 2 236 6.8E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1817 32df109f5175544109a43c28ab22e8d8 308 Pfam PF00535 Glycosyl transferase family 2 18 126 7.9E-32 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_0346 194b7677c12a6bdf4bac1d2020db2f58 245 Pfam PF12840 Helix-turn-helix domain 14 73 3.8E-8 T 14-10-2018 Afer_0346 194b7677c12a6bdf4bac1d2020db2f58 245 Gene3D G3DSA:1.10.10.10 10 96 2.3E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0346 194b7677c12a6bdf4bac1d2020db2f58 245 SUPERFAMILY SSF46785 12 200 3.11E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0607 c21071cc215d4e32d5a97413155024f9 226 SUPERFAMILY SSF55729 20 180 1.39E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_0607 c21071cc215d4e32d5a97413155024f9 226 Gene3D G3DSA:3.40.630.30 11 222 3.1E-38 T 14-10-2018 Afer_0607 c21071cc215d4e32d5a97413155024f9 226 Pfam PF13302 Acetyltransferase (GNAT) domain 72 174 5.1E-13 T 14-10-2018 IPR000182 GNAT domain Afer_1085 249895049f18087ccce5858669dde167 412 SUPERFAMILY SSF55048 124 189 3.53E-14 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding Afer_1085 249895049f18087ccce5858669dde167 412 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 295 3.6E-36 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain Afer_1085 249895049f18087ccce5858669dde167 412 Gene3D G3DSA:3.30.70.250 123 190 7.6E-83 T 14-10-2018 Afer_1085 249895049f18087ccce5858669dde167 412 Gene3D G3DSA:3.40.366.10 4 280 7.6E-83 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 Afer_1085 249895049f18087ccce5858669dde167 412 Pfam PF00698 Acyl transferase domain 3 287 5.0E-37 T 14-10-2018 IPR014043 Acyl transferase Afer_1085 249895049f18087ccce5858669dde167 412 SUPERFAMILY SSF52151 1 303 6.8E-62 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 120 133 - T 14-10-2018 IPR033135 ClpP, histidine active site Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 98 109 - T 14-10-2018 IPR018215 ClpP, Ser active site Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 Pfam PF00574 Clp protease 20 199 6.1E-82 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 11 201 43.105 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 PRINTS PR00127 Clp protease catalytic subunit P signature 27 42 1.3E-45 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 PRINTS PR00127 Clp protease catalytic subunit P signature 119 138 1.3E-45 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 PRINTS PR00127 Clp protease catalytic subunit P signature 67 87 1.3E-45 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 PRINTS PR00127 Clp protease catalytic subunit P signature 98 115 1.3E-45 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 PRINTS PR00127 Clp protease catalytic subunit P signature 176 195 1.3E-45 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 SUPERFAMILY SSF52096 20 201 1.39E-69 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0762 43d14ea93e179491f01a1881feb3cbe7 204 Gene3D G3DSA:3.90.226.10 5 203 3.8E-79 T 14-10-2018 Afer_0568 40c48293c2971ae998adf6772ee6b233 153 SUPERFAMILY SSF82649 2 147 1.2E-45 T 14-10-2018 Afer_0568 40c48293c2971ae998adf6772ee6b233 153 Pfam PF01592 NifU-like N terminal domain 8 132 3.9E-23 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 Afer_0568 40c48293c2971ae998adf6772ee6b233 153 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 144 7.8E-46 T 14-10-2018 Afer_0568 40c48293c2971ae998adf6772ee6b233 153 Gene3D G3DSA:3.90.1010.10 1 150 4.6E-51 T 14-10-2018 Afer_1478 dbddce7963282fa23e27f89c3b363b78 117 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 71 16.759 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Afer_1478 dbddce7963282fa23e27f89c3b363b78 117 SUPERFAMILY SSF117130 2 56 4.32E-14 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Afer_1478 dbddce7963282fa23e27f89c3b363b78 117 Gene3D G3DSA:3.30.70.1680 1 63 4.9E-21 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Afer_1478 dbddce7963282fa23e27f89c3b363b78 117 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 8.0E-7 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Afer_1478 dbddce7963282fa23e27f89c3b363b78 117 Pfam PF02599 Global regulator protein family 2 53 3.8E-19 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 Gene3D G3DSA:3.50.50.60 5 290 9.9E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 Gene3D G3DSA:3.50.50.60 108 226 9.9E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 289 5.1E-48 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 SUPERFAMILY SSF51905 137 298 1.06E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 Pfam PF14759 Reductase C-terminal 310 368 1.6E-5 T 14-10-2018 IPR028202 Reductase, C-terminal Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.5E-17 T 14-10-2018 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 95 113 6.5E-17 T 14-10-2018 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 219 235 6.5E-17 T 14-10-2018 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.5E-17 T 14-10-2018 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 266 6.5E-17 T 14-10-2018 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 SUPERFAMILY SSF51905 2 181 5.76E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 96 104 8.9E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 8.9E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 221 242 8.9E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 254 272 8.9E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0564 ba215053564e05cf6fb640d6f914c2b8 372 SUPERFAMILY SSF55424 301 368 2.2E-8 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 Afer_1761 d13ee32f9f7884bc41907a89bd2d7005 231 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1761 d13ee32f9f7884bc41907a89bd2d7005 231 SUPERFAMILY SSF52540 1 218 1.41E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1761 d13ee32f9f7884bc41907a89bd2d7005 231 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 2.1E-87 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 Afer_1761 d13ee32f9f7884bc41907a89bd2d7005 231 Gene3D G3DSA:3.40.50.300 1 222 2.0E-65 T 14-10-2018 Afer_1761 d13ee32f9f7884bc41907a89bd2d7005 231 SMART SM00382 27 214 4.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1761 d13ee32f9f7884bc41907a89bd2d7005 231 Pfam PF00005 ABC transporter 19 165 3.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1191 ba124c6638eaefb595603a8c88e18468 550 SMART SM00267 365 538 7.2E-52 T 14-10-2018 IPR000160 GGDEF domain Afer_1191 ba124c6638eaefb595603a8c88e18468 550 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 537 4.0E-41 T 14-10-2018 IPR000160 GGDEF domain Afer_1191 ba124c6638eaefb595603a8c88e18468 550 Gene3D G3DSA:3.30.70.270 370 539 2.1E-48 T 14-10-2018 Afer_1191 ba124c6638eaefb595603a8c88e18468 550 SMART SM00065 210 373 0.0051 T 14-10-2018 IPR003018 GAF domain GO:0005515 Afer_1191 ba124c6638eaefb595603a8c88e18468 550 SUPERFAMILY SSF55073 381 536 7.85E-40 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_1191 ba124c6638eaefb595603a8c88e18468 550 Gene3D G3DSA:3.30.450.40 193 369 6.6E-18 T 14-10-2018 IPR029016 GAF-like domain superfamily Afer_1191 ba124c6638eaefb595603a8c88e18468 550 SUPERFAMILY SSF55781 213 375 9.38E-16 T 14-10-2018 Afer_1191 ba124c6638eaefb595603a8c88e18468 550 Pfam PF13185 GAF domain 212 363 1.6E-8 T 14-10-2018 IPR003018 GAF domain GO:0005515 Afer_1191 ba124c6638eaefb595603a8c88e18468 550 Pfam PF00990 Diguanylate cyclase, GGDEF domain 376 534 3.8E-40 T 14-10-2018 IPR000160 GGDEF domain Afer_0793 1a31051d727b6e5eb0b84134fd0a5217 397 SUPERFAMILY SSF103473 6 390 1.57E-30 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_0793 1a31051d727b6e5eb0b84134fd0a5217 397 Gene3D G3DSA:1.20.1250.20 203 396 1.3E-16 T 14-10-2018 Afer_0793 1a31051d727b6e5eb0b84134fd0a5217 397 Pfam PF07690 Major Facilitator Superfamily 217 387 9.6E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_0793 1a31051d727b6e5eb0b84134fd0a5217 397 Gene3D G3DSA:1.20.1250.20 6 200 2.2E-11 T 14-10-2018 Afer_0771 d8ba443fd8833ad125a165166538ab80 111 TIGRFAM TIGR00061 L21: ribosomal protein bL21 3 99 3.9E-16 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0771 d8ba443fd8833ad125a165166538ab80 111 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 101 17.051 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0771 d8ba443fd8833ad125a165166538ab80 111 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 99 1.7E-20 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0771 d8ba443fd8833ad125a165166538ab80 111 SUPERFAMILY SSF141091 1 100 7.32E-20 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1563 c56b124c835c87345eeb39d9513b94d0 234 SUPERFAMILY SSF55961 2 147 3.96E-34 T 14-10-2018 Afer_1563 c56b124c835c87345eeb39d9513b94d0 234 Gene3D G3DSA:3.30.530.20 1 147 2.0E-42 T 14-10-2018 IPR023393 START-like domain superfamily Afer_1563 c56b124c835c87345eeb39d9513b94d0 234 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 7 142 3.6E-18 T 14-10-2018 IPR010419 Carbon monoxide dehydrogenase subunit G Afer_0193 c626eb876ff33f3ff4ad594035906597 321 Pfam PF02628 Cytochrome oxidase assembly protein 64 193 8.9E-12 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Afer_0193 c626eb876ff33f3ff4ad594035906597 321 Pfam PF02628 Cytochrome oxidase assembly protein 21 56 7.4E-8 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 Afer_1040 e20c1a95ee1783978bd84282b9f8e4d3 219 SUPERFAMILY SSF48498 84 205 6.56E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily Afer_1040 e20c1a95ee1783978bd84282b9f8e4d3 219 SUPERFAMILY SSF46689 21 80 8.48E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1040 e20c1a95ee1783978bd84282b9f8e4d3 219 Gene3D G3DSA:1.10.10.60 8 79 4.2E-20 T 14-10-2018 Afer_1040 e20c1a95ee1783978bd84282b9f8e4d3 219 Gene3D G3DSA:1.10.357.10 80 206 3.0E-20 T 14-10-2018 Afer_1040 e20c1a95ee1783978bd84282b9f8e4d3 219 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 84 187 2.5E-10 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 Afer_1040 e20c1a95ee1783978bd84282b9f8e4d3 219 Pfam PF00440 Bacterial regulatory proteins, tetR family 42 73 4.6E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1982 e1f68ab4f465572eb8dabb0bdb5301aa 426 SUPERFAMILY SSF55874 288 412 5.33E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1982 e1f68ab4f465572eb8dabb0bdb5301aa 426 Gene3D G3DSA:3.30.565.10 291 413 2.3E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1223 28ce6996d0964bbe4254d42b4a2a0c35 355 Pfam PF13439 Glycosyltransferase Family 4 14 163 8.5E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Afer_1223 28ce6996d0964bbe4254d42b4a2a0c35 355 Gene3D G3DSA:3.40.50.2000 12 344 1.6E-69 T 14-10-2018 Afer_1223 28ce6996d0964bbe4254d42b4a2a0c35 355 SUPERFAMILY SSF53756 6 348 1.22E-62 T 14-10-2018 Afer_1223 28ce6996d0964bbe4254d42b4a2a0c35 355 Gene3D G3DSA:3.40.50.2000 164 332 1.6E-69 T 14-10-2018 Afer_1223 28ce6996d0964bbe4254d42b4a2a0c35 355 Pfam PF13692 Glycosyl transferases group 1 180 312 1.2E-27 T 14-10-2018 Afer_1448 6c07db9c6407c64ed33a1f058b2ee362 426 Pfam PF07690 Major Facilitator Superfamily 34 378 1.1E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1448 6c07db9c6407c64ed33a1f058b2ee362 426 SUPERFAMILY SSF103473 52 417 1.7E-18 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1448 6c07db9c6407c64ed33a1f058b2ee362 426 Gene3D G3DSA:1.20.1250.20 30 413 1.6E-17 T 14-10-2018 Afer_1205 b4722e4454085b90536fac694c2a758d 266 Pfam PF12679 ABC-2 family transporter protein 63 210 1.4E-10 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Afer_1205 b4722e4454085b90536fac694c2a758d 266 PRINTS PR00173 Glutamate-aspartate symporter signature 110 135 1.3E-5 T 14-10-2018 Afer_1205 b4722e4454085b90536fac694c2a758d 266 PRINTS PR00173 Glutamate-aspartate symporter signature 17 37 1.3E-5 T 14-10-2018 Afer_1205 b4722e4454085b90536fac694c2a758d 266 PRINTS PR00173 Glutamate-aspartate symporter signature 65 85 1.3E-5 T 14-10-2018 Afer_1016 00f07d57ee703e3d7ad2e0a311422532 113 SUPERFAMILY SSF75169 7 111 1.06E-19 T 14-10-2018 IPR027396 DsrEFH-like Afer_1016 00f07d57ee703e3d7ad2e0a311422532 113 Gene3D G3DSA:3.40.1260.10 6 112 2.4E-19 T 14-10-2018 IPR027396 DsrEFH-like Afer_1016 00f07d57ee703e3d7ad2e0a311422532 113 Pfam PF02635 DsrE/DsrF-like family 19 111 1.8E-5 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Afer_0941 39b5b45b8940c1042e4cff7ad80ef538 431 PIRSF PIRSF000521 17 123 7.3E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0941 39b5b45b8940c1042e4cff7ad80ef538 431 PIRSF PIRSF000521 117 424 9.3E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0941 39b5b45b8940c1042e4cff7ad80ef538 431 SUPERFAMILY SSF53383 10 422 2.75E-111 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0941 39b5b45b8940c1042e4cff7ad80ef538 431 Gene3D G3DSA:3.40.640.10 57 320 9.0E-131 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0941 39b5b45b8940c1042e4cff7ad80ef538 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 275 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0941 39b5b45b8940c1042e4cff7ad80ef538 431 Gene3D G3DSA:3.90.1150.10 3 416 9.0E-131 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0941 39b5b45b8940c1042e4cff7ad80ef538 431 Pfam PF00202 Aminotransferase class-III 23 419 2.2E-92 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_1148 47adaeed02be209fd92064b9cef79fc7 375 Gene3D G3DSA:3.20.20.70 14 252 2.3E-31 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1148 47adaeed02be209fd92064b9cef79fc7 375 Pfam PF04055 Radical SAM superfamily 24 173 2.7E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 Afer_1148 47adaeed02be209fd92064b9cef79fc7 375 Pfam PF13353 4Fe-4S single cluster domain 19 96 9.4E-6 T 14-10-2018 Afer_1148 47adaeed02be209fd92064b9cef79fc7 375 SUPERFAMILY SSF102114 17 351 7.19E-50 T 14-10-2018 Afer_1148 47adaeed02be209fd92064b9cef79fc7 375 PIRSF PIRSF037420 4 375 2.4E-77 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E Afer_1148 47adaeed02be209fd92064b9cef79fc7 375 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 16 371 1.4E-130 T 14-10-2018 IPR027634 Radical SAM protein, BA_1875 family Afer_1077 4af39ace840ec73a1574fec4726e40f8 136 SUPERFAMILY SSF103481 41 135 6.28E-10 T 14-10-2018 Afer_1077 4af39ace840ec73a1574fec4726e40f8 136 Pfam PF00892 EamA-like transporter family 6 135 2.5E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_0834 e892067bb5cbffb21465c3bc7be032b7 269 Gene3D G3DSA:3.40.140.10 117 264 3.7E-34 T 14-10-2018 Afer_0834 e892067bb5cbffb21465c3bc7be032b7 269 SUPERFAMILY SSF53927 6 259 3.91E-49 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Afer_0834 e892067bb5cbffb21465c3bc7be032b7 269 PIRSF PIRSF015626 2 263 4.8E-51 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Afer_0834 e892067bb5cbffb21465c3bc7be032b7 269 Pfam PF02634 FdhD/NarQ family 18 259 1.1E-48 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 Afer_0896 033cbabdaf69886c7f312bc5cc832f3d 234 Gene3D G3DSA:1.25.40.10 30 234 1.2E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Afer_0896 033cbabdaf69886c7f312bc5cc832f3d 234 SUPERFAMILY SSF48452 50 225 7.19E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 Afer_1945 e0c3a194e0ccf5578205c11861241340 306 SUPERFAMILY SSF89392 166 271 2.04E-5 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Afer_1945 e0c3a194e0ccf5578205c11861241340 306 Gene3D G3DSA:2.50.20.20 168 274 3.2E-5 T 14-10-2018 Afer_1153 c2698b71a29a3575ea5c53fcca1c52d5 68 SUPERFAMILY SSF54285 4 65 1.74E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Afer_1153 c2698b71a29a3575ea5c53fcca1c52d5 68 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 5 66 6.5E-21 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis Afer_1153 c2698b71a29a3575ea5c53fcca1c52d5 68 Gene3D G3DSA:3.10.20.30 2 68 3.6E-22 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Afer_1153 c2698b71a29a3575ea5c53fcca1c52d5 68 Pfam PF02597 ThiS family 6 66 5.0E-15 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Afer_0696 e94259f3dd5dff4de36aa7d9342fe47e 1146 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 265 422 3.2E-27 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 Afer_0696 e94259f3dd5dff4de36aa7d9342fe47e 1146 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 154 253 1.1E-12 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 Afer_0696 e94259f3dd5dff4de36aa7d9342fe47e 1146 SUPERFAMILY SSF56645 56 256 7.85E-23 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 Afer_0696 e94259f3dd5dff4de36aa7d9342fe47e 1146 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 381 400 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 Afer_0696 e94259f3dd5dff4de36aa7d9342fe47e 1146 SUPERFAMILY SSF47203 264 425 3.22E-28 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 Afer_0696 e94259f3dd5dff4de36aa7d9342fe47e 1146 Gene3D G3DSA:1.20.140.10 265 422 1.5E-28 T 14-10-2018 Afer_0696 e94259f3dd5dff4de36aa7d9342fe47e 1146 Gene3D G3DSA:2.40.110.20 118 263 1.0E-22 T 14-10-2018 Afer_0687 c1e0673df112327608c91d4dfcbcaec5 292 Gene3D G3DSA:3.30.420.10 134 276 1.2E-8 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0687 c1e0673df112327608c91d4dfcbcaec5 292 Pfam PF13276 HTH-like domain 49 101 1.3E-18 T 14-10-2018 IPR025948 HTH-like domain Afer_0687 c1e0673df112327608c91d4dfcbcaec5 292 Pfam PF00665 Integrase core domain 126 239 6.9E-25 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0687 c1e0673df112327608c91d4dfcbcaec5 292 SUPERFAMILY SSF53098 120 282 1.24E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1225 257ccad80a98e792faffeb0e1f491111 244 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 90 5.0E-7 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Afer_1225 257ccad80a98e792faffeb0e1f491111 244 Gene3D G3DSA:1.20.120.1760 7 195 1.0E-45 T 14-10-2018 Afer_0543 082d41f5f64dd04f2918357df51350d2 466 SUPERFAMILY SSF101960 32 463 4.45E-136 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Afer_0543 082d41f5f64dd04f2918357df51350d2 466 Pfam PF01458 Uncharacterized protein family (UPF0051) 212 437 7.7E-74 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Afer_0543 082d41f5f64dd04f2918357df51350d2 466 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 457 7.5E-213 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 Afer_1751 bbb11842e3f37b74be94f2b4face76be 238 Hamap MF_00564 Ribonuclease PH [rph]. 13 238 42.701 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Afer_1751 bbb11842e3f37b74be94f2b4face76be 238 Gene3D G3DSA:3.30.230.70 11 236 9.3E-54 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_1751 bbb11842e3f37b74be94f2b4face76be 238 ProSitePatterns PS01277 Ribonuclease PH signature. 118 131 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site Afer_1751 bbb11842e3f37b74be94f2b4face76be 238 SUPERFAMILY SSF54211 4 183 4.2E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold Afer_1751 bbb11842e3f37b74be94f2b4face76be 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 4 233 4.9E-101 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 Afer_1751 bbb11842e3f37b74be94f2b4face76be 238 SUPERFAMILY SSF55666 157 232 2.49E-20 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_1751 bbb11842e3f37b74be94f2b4face76be 238 Pfam PF03725 3' exoribonuclease family, domain 2 162 225 7.2E-11 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_1751 bbb11842e3f37b74be94f2b4face76be 238 Pfam PF01138 3' exoribonuclease family, domain 1 12 141 2.8E-20 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 SMART SM00283 274 524 2.8E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 Gene3D G3DSA:1.10.287.950 213 527 3.5E-61 T 14-10-2018 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 SUPERFAMILY SSF58104 238 524 1.31E-58 T 14-10-2018 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 Pfam PF00672 HAMP domain 213 261 4.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 401 430 7.7E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 7.7E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 372 399 7.7E-20 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 350 439 3.6E-28 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 SMART SM00304 315 385 27.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Afer_0753 b7c10dc3bd9d7e362443d725fdcddfc3 558 SMART SM00304 213 266 8.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 Afer_0297 06e96cfdcc69afb9e8747c1c2bf3ed17 423 Pfam PF05977 Transmembrane secretion effector 16 402 1.8E-58 T 14-10-2018 IPR010290 Transmembrane secretion effector Afer_0297 06e96cfdcc69afb9e8747c1c2bf3ed17 423 Gene3D G3DSA:1.20.1250.20 17 404 2.0E-35 T 14-10-2018 Afer_0297 06e96cfdcc69afb9e8747c1c2bf3ed17 423 SUPERFAMILY SSF103473 21 410 2.09E-40 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1410 202efaad4291e115c2b089cb822f2437 458 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 14 430 3.5E-50 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Afer_1410 202efaad4291e115c2b089cb822f2437 458 Gene3D G3DSA:1.10.4160.10 6 444 5.5E-37 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily Afer_1410 202efaad4291e115c2b089cb822f2437 458 PIRSF PIRSF002744 1 452 3.1E-107 T 14-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 Afer_0495 1e808df84b3efcf73a7813ba78d87f21 850 Gene3D G3DSA:1.50.10.10 468 842 2.8E-84 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 Afer_0495 1e808df84b3efcf73a7813ba78d87f21 850 SUPERFAMILY SSF48208 452 827 6.8E-99 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 Afer_0495 1e808df84b3efcf73a7813ba78d87f21 850 Pfam PF00723 Glycosyl hydrolases family 15 472 777 4.3E-52 T 14-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 Afer_0670 1578346776f17422a2153393668805fe 154 SUPERFAMILY SSF55961 3 144 1.22E-17 T 14-10-2018 Afer_0670 1578346776f17422a2153393668805fe 154 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 6 142 3.3E-9 T 14-10-2018 IPR019587 Polyketide cyclase/dehydrase Afer_0670 1578346776f17422a2153393668805fe 154 Gene3D G3DSA:3.30.530.20 5 148 2.8E-25 T 14-10-2018 IPR023393 START-like domain superfamily Afer_1346 9ee65a362d0f3182fe4c89ecab6de7d9 508 SUPERFAMILY SSF52096 211 488 9.81E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1346 9ee65a362d0f3182fe4c89ecab6de7d9 508 Pfam PF01039 Carboxyl transferase domain 28 505 3.6E-150 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Afer_1346 9ee65a362d0f3182fe4c89ecab6de7d9 508 Gene3D G3DSA:3.90.226.10 2 245 2.2E-77 T 14-10-2018 Afer_1346 9ee65a362d0f3182fe4c89ecab6de7d9 508 SUPERFAMILY SSF52096 6 249 1.32E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1346 9ee65a362d0f3182fe4c89ecab6de7d9 508 Gene3D G3DSA:3.90.226.10 246 504 7.1E-81 T 14-10-2018 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 PRINTS PR00046 Major sigma-70 factor signature 77 85 1.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 PRINTS PR00046 Major sigma-70 factor signature 202 214 1.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 PRINTS PR00046 Major sigma-70 factor signature 234 245 1.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 PRINTS PR00046 Major sigma-70 factor signature 219 234 1.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 PRINTS PR00046 Major sigma-70 factor signature 53 66 1.6E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 Pfam PF04545 Sigma-70, region 4 199 246 3.2E-17 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 SUPERFAMILY SSF88946 9 98 1.57E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 248 4.5E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 SUPERFAMILY SSF88659 99 177 2.35E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 SUPERFAMILY SSF88659 164 250 5.05E-20 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 PIRSF PIRSF000770 7 253 1.1E-62 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 Pfam PF04539 Sigma-70 region 3 108 144 1.6E-6 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 Gene3D G3DSA:1.20.140.160 97 251 4.9E-46 T 14-10-2018 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 26 249 4.1E-78 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 Gene3D G3DSA:1.10.1740.10 13 96 1.4E-28 T 14-10-2018 Afer_0625 3dd0a71c6dd70b306be39080cb3f639e 254 Pfam PF04542 Sigma-70 region 2 26 98 6.5E-16 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 Gene3D G3DSA:3.30.70.270 511 682 3.3E-37 T 14-10-2018 Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 SUPERFAMILY SSF55073 530 681 7.3E-31 T 14-10-2018 IPR029787 Nucleotide cyclase Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 SUPERFAMILY SSF141868 696 928 6.28E-55 T 14-10-2018 IPR035919 EAL domain superfamily Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 SMART SM00267 514 679 2.3E-32 T 14-10-2018 IPR000160 GGDEF domain Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 524 678 8.4E-24 T 14-10-2018 IPR000160 GGDEF domain Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 SMART SM00052 689 930 1.9E-53 T 14-10-2018 IPR001633 EAL domain Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 Gene3D G3DSA:3.20.20.450 687 933 2.4E-61 T 14-10-2018 IPR035919 EAL domain superfamily Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 Pfam PF00563 EAL domain 697 925 6.5E-49 T 14-10-2018 IPR001633 EAL domain Afer_0820 edba0ab56447594e1eb4bb87a1b00812 1064 Pfam PF00990 Diguanylate cyclase, GGDEF domain 525 674 5.6E-26 T 14-10-2018 IPR000160 GGDEF domain Afer_0618 425e5e5cc6bd4b2ea1cea8b2431370a8 155 Pfam PF00583 Acetyltransferase (GNAT) family 34 131 1.1E-18 T 14-10-2018 IPR000182 GNAT domain Afer_0618 425e5e5cc6bd4b2ea1cea8b2431370a8 155 SUPERFAMILY SSF55729 10 152 1.89E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_0618 425e5e5cc6bd4b2ea1cea8b2431370a8 155 Gene3D G3DSA:3.40.630.30 3 153 3.8E-31 T 14-10-2018 Afer_0744 b66e47a9bfdd14e3c34d50654c7853a5 363 Gene3D G3DSA:3.40.50.2000 4 174 4.7E-12 T 14-10-2018 Afer_0744 b66e47a9bfdd14e3c34d50654c7853a5 363 Pfam PF00534 Glycosyl transferases group 1 184 333 3.1E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_0744 b66e47a9bfdd14e3c34d50654c7853a5 363 Gene3D G3DSA:3.40.50.2000 179 361 5.9E-34 T 14-10-2018 Afer_0744 b66e47a9bfdd14e3c34d50654c7853a5 363 SUPERFAMILY SSF53756 4 360 3.4E-64 T 14-10-2018 Afer_0744 b66e47a9bfdd14e3c34d50654c7853a5 363 Pfam PF13439 Glycosyltransferase Family 4 17 171 2.1E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Afer_0384 bb9407d9b3c7d651328803dce417837e 179 Gene3D G3DSA:1.10.1740.10 1 103 3.5E-20 T 14-10-2018 Afer_0384 bb9407d9b3c7d651328803dce417837e 179 SUPERFAMILY SSF88659 95 155 1.2E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like Afer_0384 bb9407d9b3c7d651328803dce417837e 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 152 1.1E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 Afer_0384 bb9407d9b3c7d651328803dce417837e 179 SUPERFAMILY SSF88946 7 84 6.28E-18 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0384 bb9407d9b3c7d651328803dce417837e 179 Pfam PF08281 Sigma-70, region 4 101 151 2.6E-14 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 Afer_0384 bb9407d9b3c7d651328803dce417837e 179 Gene3D G3DSA:1.10.10.10 104 161 4.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0384 bb9407d9b3c7d651328803dce417837e 179 Pfam PF04542 Sigma-70 region 2 4 67 2.2E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 Afer_0612 9bb14374899d0c7633aa65018be12efc 815 Pfam PF01804 Penicillin amidase 63 799 1.7E-155 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 Afer_0612 9bb14374899d0c7633aa65018be12efc 815 Gene3D G3DSA:1.10.1400.10 571 713 1.8E-107 T 14-10-2018 Afer_0612 9bb14374899d0c7633aa65018be12efc 815 Gene3D G3DSA:2.30.120.10 355 420 1.8E-107 T 14-10-2018 Afer_0612 9bb14374899d0c7633aa65018be12efc 815 PIRSF PIRSF001227 25 803 2.3E-155 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 Afer_0612 9bb14374899d0c7633aa65018be12efc 815 Gene3D G3DSA:3.60.20.10 283 792 1.8E-107 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0612 9bb14374899d0c7633aa65018be12efc 815 SUPERFAMILY SSF56235 61 798 4.63E-145 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0612 9bb14374899d0c7633aa65018be12efc 815 Gene3D G3DSA:1.10.439.10 42 197 5.0E-33 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 Afer_1188 e49b3b197b9d763159b7d435b1f6d498 529 Pfam PF02601 Exonuclease VII, large subunit 133 502 4.6E-43 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 Afer_1188 e49b3b197b9d763159b7d435b1f6d498 529 Pfam PF13742 OB-fold nucleic acid binding domain 6 107 2.4E-17 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 Afer_1188 e49b3b197b9d763159b7d435b1f6d498 529 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 7 343 3.7E-59 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 Afer_0270 dd457a088e0acb8837f33164d7ebf638 626 Pfam PF00664 ABC transporter transmembrane region 46 316 3.4E-36 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 Afer_0270 dd457a088e0acb8837f33164d7ebf638 626 Gene3D G3DSA:1.20.1560.10 21 350 1.3E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_0270 dd457a088e0acb8837f33164d7ebf638 626 SUPERFAMILY SSF90123 32 345 5.49E-64 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_0270 dd457a088e0acb8837f33164d7ebf638 626 Gene3D G3DSA:3.40.50.300 354 623 3.2E-85 T 14-10-2018 Afer_0270 dd457a088e0acb8837f33164d7ebf638 626 SMART SM00382 405 591 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0270 dd457a088e0acb8837f33164d7ebf638 626 Pfam PF00005 ABC transporter 397 545 6.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0270 dd457a088e0acb8837f33164d7ebf638 626 SUPERFAMILY SSF52540 352 616 7.68E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0270 dd457a088e0acb8837f33164d7ebf638 626 ProSitePatterns PS00211 ABC transporters family signature. 517 531 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1602 f4a8da5a3bbe713ae868089b7a5e05de 688 Pfam PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region 130 379 2.7E-24 T 14-10-2018 IPR002469 Dipeptidylpeptidase IV, N-terminal domain GO:0006508 Afer_1602 f4a8da5a3bbe713ae868089b7a5e05de 688 Gene3D G3DSA:3.40.50.1820 431 685 8.9E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1602 f4a8da5a3bbe713ae868089b7a5e05de 688 Pfam PF00326 Prolyl oligopeptidase family 484 684 1.2E-43 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Afer_1602 f4a8da5a3bbe713ae868089b7a5e05de 688 SUPERFAMILY SSF82171 103 394 1.44E-16 T 14-10-2018 Afer_1602 f4a8da5a3bbe713ae868089b7a5e05de 688 Gene3D G3DSA:2.140.10.30 24 425 1.5E-42 T 14-10-2018 IPR038554 Dipeptidylpeptidase IV, N-terminal domain superfamily Afer_1602 f4a8da5a3bbe713ae868089b7a5e05de 688 SUPERFAMILY SSF53474 432 684 1.2E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1790 48c90ac1a66b3ea10d2a97f7ba49ea26 537 Gene3D G3DSA:3.40.50.1820 312 520 1.5E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1790 48c90ac1a66b3ea10d2a97f7ba49ea26 537 SUPERFAMILY SSF75011 54 193 9.15E-8 T 14-10-2018 Afer_1790 48c90ac1a66b3ea10d2a97f7ba49ea26 537 SUPERFAMILY SSF53474 322 506 1.08E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1790 48c90ac1a66b3ea10d2a97f7ba49ea26 537 Pfam PF00326 Prolyl oligopeptidase family 353 522 2.5E-9 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 Afer_1051 b98965ab96fef35eaa6a66d7dac6b83f 331 Pfam PF13276 HTH-like domain 50 101 8.7E-20 T 14-10-2018 IPR025948 HTH-like domain Afer_1051 b98965ab96fef35eaa6a66d7dac6b83f 331 Gene3D G3DSA:3.30.420.10 131 250 4.2E-8 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1051 b98965ab96fef35eaa6a66d7dac6b83f 331 SUPERFAMILY SSF53098 121 258 3.04E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1051 b98965ab96fef35eaa6a66d7dac6b83f 331 Pfam PF00665 Integrase core domain 126 239 1.2E-24 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_0168 5b316c586bf376101a750b69cb267256 257 Gene3D G3DSA:3.30.70.260 159 253 8.6E-20 T 14-10-2018 Afer_0168 5b316c586bf376101a750b69cb267256 257 Pfam PF02308 MgtC family 21 150 4.1E-34 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Afer_0168 5b316c586bf376101a750b69cb267256 257 PRINTS PR01837 MgtC/SapB protein signature 23 42 3.7E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Afer_0168 5b316c586bf376101a750b69cb267256 257 PRINTS PR01837 MgtC/SapB protein signature 104 128 3.7E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Afer_0168 5b316c586bf376101a750b69cb267256 257 PRINTS PR01837 MgtC/SapB protein signature 77 99 3.7E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Afer_0168 5b316c586bf376101a750b69cb267256 257 PRINTS PR01837 MgtC/SapB protein signature 42 60 3.7E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 Afer_1812 73d8fa0a2678c1c9d2aa77266ee85c3f 356 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 61 74 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 Afer_1812 73d8fa0a2678c1c9d2aa77266ee85c3f 356 SUPERFAMILY SSF53686 13 341 4.58E-100 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme Afer_1812 73d8fa0a2678c1c9d2aa77266ee85c3f 356 Gene3D G3DSA:3.40.50.1100 69 165 2.2E-121 T 14-10-2018 Afer_1812 73d8fa0a2678c1c9d2aa77266ee85c3f 356 Gene3D G3DSA:3.40.50.1100 20 329 2.2E-121 T 14-10-2018 Afer_1812 73d8fa0a2678c1c9d2aa77266ee85c3f 356 PIRSF PIRSF038945 2 355 1.5E-148 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 Afer_1812 73d8fa0a2678c1c9d2aa77266ee85c3f 356 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 34 323 1.5E-74 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme Afer_1812 73d8fa0a2678c1c9d2aa77266ee85c3f 356 TIGRFAM TIGR00260 thrC: threonine synthase 19 330 6.3E-87 T 14-10-2018 IPR004450 Threonine synthase-like Afer_0964 50fe043031013b802b00cfd2757a44aa 239 Gene3D G3DSA:1.10.1060.10 23 123 3.6E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0964 50fe043031013b802b00cfd2757a44aa 239 Pfam PF13183 4Fe-4S dicluster domain 44 104 4.0E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_0964 50fe043031013b802b00cfd2757a44aa 239 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 46 57 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_0964 50fe043031013b802b00cfd2757a44aa 239 SUPERFAMILY SSF46548 34 122 6.45E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 PIRSF PIRSF000149 1 337 3.5E-121 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 2 329 6.2E-126 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 Gene3D G3DSA:3.30.360.10 150 319 2.9E-136 T 14-10-2018 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 SUPERFAMILY SSF51735 1 167 1.54E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 Gene3D G3DSA:3.40.50.720 2 332 2.9E-136 T 14-10-2018 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 SMART SM00846 1 151 1.9E-87 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 1 101 5.2E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 1.1E-33 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 1.1E-33 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.1E-33 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.1E-33 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 1.1E-33 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 317 5.6E-57 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 Afer_0849 5e8637b2a3752f2ec67da5facd26685c 341 SUPERFAMILY SSF55347 151 318 1.49E-63 T 14-10-2018 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 433 445 - T 14-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 33 44 - T 14-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 SUPERFAMILY SSF51621 22 772 9.26E-202 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 Pfam PF00311 Phosphoenolpyruvate carboxylase 29 772 1.3E-199 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 473 502 2.2E-51 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 431 451 2.2E-51 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 124 139 2.2E-51 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 32 45 2.2E-51 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 603 629 2.2E-51 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0101 3b1556b1df1b987df720d09db7ece6e9 772 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 278 298 2.2E-51 T 14-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 Afer_0127 6c8189ed197adba0395006dc98d95902 151 PRINTS PR00601 Bacterioferritin signature 107 127 8.8E-6 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Afer_0127 6c8189ed197adba0395006dc98d95902 151 PRINTS PR00601 Bacterioferritin signature 65 85 8.8E-6 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Afer_0127 6c8189ed197adba0395006dc98d95902 151 PRINTS PR00601 Bacterioferritin signature 23 43 8.8E-6 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Afer_0127 6c8189ed197adba0395006dc98d95902 151 PRINTS PR00601 Bacterioferritin signature 3 22 8.8E-6 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Afer_0127 6c8189ed197adba0395006dc98d95902 151 PRINTS PR00601 Bacterioferritin signature 86 106 8.8E-6 T 14-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 Afer_0127 6c8189ed197adba0395006dc98d95902 151 SUPERFAMILY SSF47240 13 138 4.39E-20 T 14-10-2018 IPR009078 Ferritin-like superfamily Afer_0127 6c8189ed197adba0395006dc98d95902 151 Gene3D G3DSA:1.20.1260.10 2 145 1.7E-26 T 14-10-2018 IPR012347 Ferritin-like Afer_0127 6c8189ed197adba0395006dc98d95902 151 Pfam PF00210 Ferritin-like domain 14 142 1.7E-11 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 Afer_0175 a8f211ee1c573d11c95e27baf18a5a2d 266 Gene3D G3DSA:3.40.50.300 4 266 5.1E-76 T 14-10-2018 Afer_0175 a8f211ee1c573d11c95e27baf18a5a2d 266 SUPERFAMILY SSF52540 6 251 2.02E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0175 a8f211ee1c573d11c95e27baf18a5a2d 266 Pfam PF00005 ABC transporter 26 179 2.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0175 a8f211ee1c573d11c95e27baf18a5a2d 266 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0175 a8f211ee1c573d11c95e27baf18a5a2d 266 SMART SM00382 35 244 6.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1780 f2278b198f86dbcebe1309bbebaabe24 321 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 14 303 1.1E-81 T 14-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_1780 f2278b198f86dbcebe1309bbebaabe24 321 Gene3D G3DSA:3.40.50.300 43 246 1.4E-77 T 14-10-2018 Afer_1780 f2278b198f86dbcebe1309bbebaabe24 321 Pfam PF03308 ArgK protein 20 279 8.5E-80 T 14-10-2018 Afer_1780 f2278b198f86dbcebe1309bbebaabe24 321 SUPERFAMILY SSF52540 3 305 3.45E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0974 da0a6ed7cb649eb9e8851c478ac6e514 158 SUPERFAMILY SSF51230 17 133 1.96E-25 T 14-10-2018 IPR011053 Single hybrid motif Afer_0974 da0a6ed7cb649eb9e8851c478ac6e514 158 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 55 84 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Afer_0974 da0a6ed7cb649eb9e8851c478ac6e514 158 Gene3D G3DSA:2.40.50.100 8 139 2.5E-28 T 14-10-2018 Afer_0974 da0a6ed7cb649eb9e8851c478ac6e514 158 Pfam PF01597 Glycine cleavage H-protein 16 130 7.6E-26 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate Afer_0173 6656473133c24e22a056e680b27d1422 309 SUPERFAMILY SSF161098 97 277 2.88E-19 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0173 6656473133c24e22a056e680b27d1422 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 306 2.6E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_0173 6656473133c24e22a056e680b27d1422 309 Gene3D G3DSA:1.10.3720.10 91 301 1.0E-16 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0173 6656473133c24e22a056e680b27d1422 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 36 79 3.6E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Afer_0881 874c5248fb40f69fac79ca0f5549acac 343 SUPERFAMILY SSF51905 2 291 5.31E-14 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0881 874c5248fb40f69fac79ca0f5549acac 343 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.2E-6 T 14-10-2018 Afer_0881 874c5248fb40f69fac79ca0f5549acac 343 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 145 160 1.2E-6 T 14-10-2018 Afer_0881 874c5248fb40f69fac79ca0f5549acac 343 Gene3D G3DSA:3.50.50.60 1 62 3.2E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0881 874c5248fb40f69fac79ca0f5549acac 343 Gene3D G3DSA:3.50.50.60 177 337 1.3E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0347 42d0f41cebc572665d083d84e2fd8cce 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 113 351 3.0E-81 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 Afer_0347 42d0f41cebc572665d083d84e2fd8cce 369 ProSitePatterns PS01215 Mrp family signature. 216 232 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 Afer_0347 42d0f41cebc572665d083d84e2fd8cce 369 SUPERFAMILY SSF117916 4 67 7.52E-6 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Afer_0347 42d0f41cebc572665d083d84e2fd8cce 369 Gene3D G3DSA:3.30.300.130 2 90 3.3E-5 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily Afer_0347 42d0f41cebc572665d083d84e2fd8cce 369 Gene3D G3DSA:3.40.50.300 105 347 5.3E-64 T 14-10-2018 Afer_0347 42d0f41cebc572665d083d84e2fd8cce 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 103 352 33.263 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein Afer_0347 42d0f41cebc572665d083d84e2fd8cce 369 SUPERFAMILY SSF52540 112 353 1.18E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1807 8c5754f3859ada9239c9d32c91b63da1 255 Pfam PF05175 Methyltransferase small domain 69 162 4.4E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 Afer_1807 8c5754f3859ada9239c9d32c91b63da1 255 Gene3D G3DSA:1.10.8.10 13 56 1.5E-5 T 14-10-2018 Afer_1807 8c5754f3859ada9239c9d32c91b63da1 255 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 27 247 2.0E-53 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 Afer_1807 8c5754f3859ada9239c9d32c91b63da1 255 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 243 3.7E-68 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 Afer_1807 8c5754f3859ada9239c9d32c91b63da1 255 Gene3D G3DSA:3.40.50.150 57 252 9.4E-55 T 14-10-2018 Afer_1807 8c5754f3859ada9239c9d32c91b63da1 255 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 151 157 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 Afer_1807 8c5754f3859ada9239c9d32c91b63da1 255 SUPERFAMILY SSF53335 36 214 1.21E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 Pfam PF13840 ACT domain 339 401 5.8E-16 T 14-10-2018 IPR027795 CASTOR, ACT domain Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 Pfam PF01842 ACT domain 268 326 9.9E-10 T 14-10-2018 IPR002912 ACT domain Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 PIRSF PIRSF000726 3 64 2.1E-19 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 PIRSF PIRSF000726 57 411 3.7E-128 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 Gene3D G3DSA:3.30.70.260 258 405 4.8E-59 T 14-10-2018 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 4 405 2.6E-127 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 SUPERFAMILY SSF55021 335 406 6.15E-23 T 14-10-2018 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 Gene3D G3DSA:3.30.70.260 263 340 4.8E-59 T 14-10-2018 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 67 404 3.3E-118 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 Gene3D G3DSA:3.40.1160.10 3 257 8.6E-88 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 SUPERFAMILY SSF53633 6 245 6.28E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 Pfam PF00696 Amino acid kinase family 5 233 1.0E-53 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 SUPERFAMILY SSF55021 250 328 1.87E-18 T 14-10-2018 Afer_0111 89c5e2c9e43323c7239be8e7f4bcef82 411 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 Afer_0472 b3f2b7e6244fb0b9a66099e0f4e23e62 459 SUPERFAMILY SSF111283 5 456 1.57E-116 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Afer_0472 b3f2b7e6244fb0b9a66099e0f4e23e62 459 Gene3D G3DSA:3.30.2290.10 3 218 4.2E-23 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Afer_0472 b3f2b7e6244fb0b9a66099e0f4e23e62 459 Pfam PF01523 Putative modulator of DNA gyrase 21 310 7.5E-63 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Afer_0472 b3f2b7e6244fb0b9a66099e0f4e23e62 459 PIRSF PIRSF004919 2 457 8.1E-130 T 14-10-2018 IPR025502 TldD Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.1E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 SUPERFAMILY SSF51735 3 247 1.77E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 Pfam PF00106 short chain dehydrogenase 8 201 9.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 Gene3D G3DSA:3.40.50.720 1 251 6.4E-71 T 14-10-2018 Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Afer_0715 f8bd0e91af2617a1cb76ea610e01a268 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0014 T 14-10-2018 Afer_1550 c0550e24c8a78637a957735f1043edf0 479 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 14 478 87.268 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1550 c0550e24c8a78637a957735f1043edf0 479 SUPERFAMILY SSF75304 4 475 1.02E-157 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1550 c0550e24c8a78637a957735f1043edf0 479 Pfam PF01425 Amidase 27 467 2.9E-153 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1550 c0550e24c8a78637a957735f1043edf0 479 Gene3D G3DSA:3.90.1300.10 8 478 1.3E-181 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1550 c0550e24c8a78637a957735f1043edf0 479 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 17 475 6.5E-172 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1550 c0550e24c8a78637a957735f1043edf0 479 ProSitePatterns PS00571 Amidases signature. 155 186 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 Afer_0840 6c83b491ffbcdead6496bc7c13cf94ef 284 PIRSF PIRSF028756 10 280 9.2E-62 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 Afer_0840 6c83b491ffbcdead6496bc7c13cf94ef 284 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 33 265 4.2E-83 T 14-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 Afer_0840 6c83b491ffbcdead6496bc7c13cf94ef 284 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 36 254 9.9E-56 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related Afer_0840 6c83b491ffbcdead6496bc7c13cf94ef 284 SUPERFAMILY SSF52540 63 252 1.46E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0840 6c83b491ffbcdead6496bc7c13cf94ef 284 Gene3D G3DSA:3.40.50.300 8 274 4.4E-83 T 14-10-2018 Afer_0226 b332d48bbc376158415f7a94e785ebff 142 Pfam PF07884 Vitamin K epoxide reductase family 5 128 1.4E-26 T 14-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 Afer_0226 b332d48bbc376158415f7a94e785ebff 142 SMART SM00756 2 132 1.4E-19 T 14-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 Afer_0226 b332d48bbc376158415f7a94e785ebff 142 Gene3D G3DSA:1.20.1440.130 1 139 9.6E-27 T 14-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 Afer_0121 324d660f45bb019d03210567ecbaef39 640 Pfam PF12288 Carboxysome shell peptide mid-region 441 532 1.6E-5 T 14-10-2018 IPR020990 Carboxysome shell protein Afer_0121 324d660f45bb019d03210567ecbaef39 640 Pfam PF12288 Carboxysome shell peptide mid-region 89 470 5.3E-104 T 14-10-2018 IPR020990 Carboxysome shell protein Afer_0842 5d81cb64e13654ca0dab28612e43be24 235 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 19 219 8.9E-51 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Afer_0842 5d81cb64e13654ca0dab28612e43be24 235 Pfam PF01209 ubiE/COQ5 methyltransferase family 17 210 4.3E-34 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Afer_0842 5d81cb64e13654ca0dab28612e43be24 235 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 10 232 28.026 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 Afer_0842 5d81cb64e13654ca0dab28612e43be24 235 SUPERFAMILY SSF53335 8 212 1.4E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0842 5d81cb64e13654ca0dab28612e43be24 235 Gene3D G3DSA:3.40.50.150 25 232 2.4E-47 T 14-10-2018 Afer_0768 e0c588b7226bc8821177a48a4d504e2a 167 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 5 151 3.9E-14 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Afer_0768 e0c588b7226bc8821177a48a4d504e2a 167 Pfam PF04093 rod shape-determining protein MreD 4 118 1.6E-6 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 Afer_2038 21e36e986491e25bedf4cebe5298fdbd 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 2 42 5.0E-5 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_2038 21e36e986491e25bedf4cebe5298fdbd 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_2038 21e36e986491e25bedf4cebe5298fdbd 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 1.2E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_2038 21e36e986491e25bedf4cebe5298fdbd 44 Pfam PF00468 Ribosomal protein L34 1 44 2.3E-23 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_2038 21e36e986491e25bedf4cebe5298fdbd 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.659 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1703 8085a6066e2678a378b627bc567988a0 169 SUPERFAMILY SSF53271 5 157 9.96E-35 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Afer_1703 8085a6066e2678a378b627bc567988a0 169 Gene3D G3DSA:3.40.50.2020 1 167 2.2E-43 T 14-10-2018 Afer_1703 8085a6066e2678a378b627bc567988a0 169 Pfam PF00156 Phosphoribosyl transferase domain 7 142 5.1E-22 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 Afer_0885 2c0d21a4b7dbc39cbe901751c5a02999 293 SUPERFAMILY SSF161098 86 273 1.7E-20 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0885 2c0d21a4b7dbc39cbe901751c5a02999 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 292 4.7E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_0885 2c0d21a4b7dbc39cbe901751c5a02999 293 Gene3D G3DSA:1.10.3720.10 87 291 9.9E-18 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0885 2c0d21a4b7dbc39cbe901751c5a02999 293 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 68 1.9E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Afer_0577 f3a7b1bd177ae7dfc104c29b493d8f12 294 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 29 265 3.1E-26 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related Afer_0063 8caeb9817f641b32663f9c860237b385 107 Pfam PF07702 UTRA domain 4 87 2.3E-7 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 Afer_0063 8caeb9817f641b32663f9c860237b385 107 SUPERFAMILY SSF64288 7 91 3.14E-10 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Afer_0063 8caeb9817f641b32663f9c860237b385 107 Gene3D G3DSA:3.40.1410.10 1 102 2.5E-10 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 SUPERFAMILY SSF53756 690 965 3.18E-28 T 14-10-2018 Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 Pfam PF00534 Glycosyl transferases group 1 145 276 1.6E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 Pfam PF00534 Glycosyl transferases group 1 852 908 1.7E-10 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 SUPERFAMILY SSF53756 17 358 6.73E-34 T 14-10-2018 Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 Gene3D G3DSA:3.40.50.150 445 616 1.2E-31 T 14-10-2018 Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 Pfam PF08241 Methyltransferase domain 472 565 4.3E-10 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 SUPERFAMILY SSF53335 454 617 1.0E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 Gene3D G3DSA:3.40.50.2000 145 359 1.7E-28 T 14-10-2018 Afer_0107 6863a7383b6b26ac1c891f3dee2b7336 995 Gene3D G3DSA:3.40.50.2000 772 976 2.3E-26 T 14-10-2018 Afer_0044 b91740e0b9ab6ed9d80c51672948171e 148 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 120 2.4E-31 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Afer_0044 b91740e0b9ab6ed9d80c51672948171e 148 Gene3D G3DSA:2.40.50.140 1 119 2.3E-40 T 14-10-2018 Afer_0044 b91740e0b9ab6ed9d80c51672948171e 148 SUPERFAMILY SSF50249 5 130 2.78E-40 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0044 b91740e0b9ab6ed9d80c51672948171e 148 Hamap MF_00984 Single-stranded DNA-binding protein. 4 112 28.19 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 Afer_0044 b91740e0b9ab6ed9d80c51672948171e 148 Pfam PF00436 Single-strand binding protein family 5 106 9.7E-32 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 Afer_1452 f5b6433e3959e68b9f3e18452ea00f09 273 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 5 132 6.6E-30 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Afer_1452 f5b6433e3959e68b9f3e18452ea00f09 273 SUPERFAMILY SSF46785 5 134 2.21E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1452 f5b6433e3959e68b9f3e18452ea00f09 273 Pfam PF02082 Transcriptional regulator 4 84 2.4E-22 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type Afer_1452 f5b6433e3959e68b9f3e18452ea00f09 273 Gene3D G3DSA:1.10.10.10 1 141 6.3E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1452 f5b6433e3959e68b9f3e18452ea00f09 273 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site Afer_1575 6a02f0d20fab642d6af59341893571b5 404 Gene3D G3DSA:3.40.50.2300 75 363 2.7E-72 T 14-10-2018 Afer_1575 6a02f0d20fab642d6af59341893571b5 404 SUPERFAMILY SSF53822 102 375 2.54E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I Afer_1575 6a02f0d20fab642d6af59341893571b5 404 Gene3D G3DSA:3.40.50.2300 178 382 2.7E-72 T 14-10-2018 Afer_1575 6a02f0d20fab642d6af59341893571b5 404 Pfam PF13407 Periplasmic binding protein domain 79 338 1.1E-45 T 14-10-2018 IPR025997 Periplasmic binding protein Afer_0791 721535fb9fcc868eba821bef1263b947 307 SUPERFAMILY SSF51679 16 304 1.47E-42 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Afer_0791 721535fb9fcc868eba821bef1263b947 307 Pfam PF00296 Luciferase-like monooxygenase 13 248 7.6E-32 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Afer_0791 721535fb9fcc868eba821bef1263b947 307 Gene3D G3DSA:3.20.20.30 5 306 3.5E-47 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Afer_1608 142c2838ab6b342157bebb6dc889c3bd 131 Gene3D G3DSA:3.30.1050.10 4 111 3.8E-17 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Afer_1608 142c2838ab6b342157bebb6dc889c3bd 131 Pfam PF02036 SCP-2 sterol transfer family 18 103 1.1E-9 T 14-10-2018 IPR003033 SCP2 sterol-binding domain Afer_1608 142c2838ab6b342157bebb6dc889c3bd 131 SUPERFAMILY SSF55718 19 105 4.94E-15 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Afer_0271 c905261e5fe196c81d21f1fb2badbc6b 233 TIGRFAM TIGR02476 BluB: 5,6-dimethylbenzimidazole synthase 6 202 9.7E-63 T 14-10-2018 IPR012825 5,6-dimethylbenzimidazole synthase BluB KEGG: 00740+1.13.11.79|MetaCyc: PWY-5523 Afer_0271 c905261e5fe196c81d21f1fb2badbc6b 233 Pfam PF00881 Nitroreductase family 14 178 9.3E-30 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Afer_0271 c905261e5fe196c81d21f1fb2badbc6b 233 Gene3D G3DSA:3.40.109.10 2 182 5.0E-45 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Afer_0271 c905261e5fe196c81d21f1fb2badbc6b 233 SUPERFAMILY SSF55469 7 210 2.09E-46 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Afer_1019 62cf81cedfbfdf2fe27327f0d7f0d0be 282 SUPERFAMILY SSF89155 41 160 4.45E-13 T 14-10-2018 IPR036411 TorD-like superfamily Afer_1019 62cf81cedfbfdf2fe27327f0d7f0d0be 282 Pfam PF02613 Nitrate reductase delta subunit 41 110 2.0E-5 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone Afer_1019 62cf81cedfbfdf2fe27327f0d7f0d0be 282 Gene3D G3DSA:1.10.3480.10 2 164 9.3E-12 T 14-10-2018 Afer_0799 7199abdbc928d81dcc937d652e219071 395 Gene3D G3DSA:3.10.180.10 269 395 5.7E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Afer_0799 7199abdbc928d81dcc937d652e219071 395 SUPERFAMILY SSF54593 279 393 5.92E-14 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase Afer_0799 7199abdbc928d81dcc937d652e219071 395 Pfam PF01903 CbiX 137 238 9.8E-15 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Afer_0799 7199abdbc928d81dcc937d652e219071 395 Pfam PF01903 CbiX 15 117 1.8E-18 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 Afer_0799 7199abdbc928d81dcc937d652e219071 395 Gene3D G3DSA:3.40.50.1400 128 248 6.6E-20 T 14-10-2018 Afer_0799 7199abdbc928d81dcc937d652e219071 395 Gene3D G3DSA:3.40.50.1400 7 125 8.4E-23 T 14-10-2018 Afer_0799 7199abdbc928d81dcc937d652e219071 395 SUPERFAMILY SSF53800 10 246 2.62E-39 T 14-10-2018 Afer_0108 5c3c3250e38d5ce90d0b110dbd2a8757 193 Gene3D G3DSA:2.40.100.10 37 188 2.8E-45 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Afer_0108 5c3c3250e38d5ce90d0b110dbd2a8757 193 PIRSF PIRSF001467 34 192 3.4E-37 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 Afer_0108 5c3c3250e38d5ce90d0b110dbd2a8757 193 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 43 185 1.5E-32 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0108 5c3c3250e38d5ce90d0b110dbd2a8757 193 SUPERFAMILY SSF50891 41 189 3.51E-44 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily Afer_0108 5c3c3250e38d5ce90d0b110dbd2a8757 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 80 92 5.2E-20 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0108 5c3c3250e38d5ce90d0b110dbd2a8757 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 5.2E-20 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0108 5c3c3250e38d5ce90d0b110dbd2a8757 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 69 5.2E-20 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0108 5c3c3250e38d5ce90d0b110dbd2a8757 193 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 5.2E-20 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 Afer_0389 2c02e3ec3318525d3ac7871683178c21 174 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 144 0.002 T 14-10-2018 Afer_0389 2c02e3ec3318525d3ac7871683178c21 174 Pfam PF00466 Ribosomal protein L10 5 99 1.4E-23 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 Afer_0389 2c02e3ec3318525d3ac7871683178c21 174 SUPERFAMILY SSF160369 4 171 4.97E-49 T 14-10-2018 Afer_0389 2c02e3ec3318525d3ac7871683178c21 174 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 24.448 T 14-10-2018 IPR022973 Ribosomal protein L10 Afer_0389 2c02e3ec3318525d3ac7871683178c21 174 Gene3D G3DSA:3.30.70.1730 2 152 6.9E-34 T 14-10-2018 Afer_2018 34fca2e5511da68bbc0b045f74f9bfd5 156 Pfam PF14437 MafB19-like deaminase 5 150 4.1E-22 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Afer_2018 34fca2e5511da68bbc0b045f74f9bfd5 156 Gene3D G3DSA:3.40.140.10 1 154 2.0E-49 T 14-10-2018 Afer_2018 34fca2e5511da68bbc0b045f74f9bfd5 156 SUPERFAMILY SSF53927 3 151 6.85E-44 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 Afer_2018 34fca2e5511da68bbc0b045f74f9bfd5 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 Afer_2018 34fca2e5511da68bbc0b045f74f9bfd5 156 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 38.476 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 Afer_0478 8d31139ebf78a1d2d3fba6e3356007ca 209 SUPERFAMILY SSF143081 2 170 3.14E-27 T 14-10-2018 IPR036590 SOS response associated peptidase-like Afer_0478 8d31139ebf78a1d2d3fba6e3356007ca 209 Gene3D G3DSA:3.90.1680.10 1 188 3.5E-25 T 14-10-2018 IPR036590 SOS response associated peptidase-like Afer_0478 8d31139ebf78a1d2d3fba6e3356007ca 209 Pfam PF02586 SOS response associated peptidase (SRAP) 1 169 1.8E-17 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) Afer_0722 6a3160e24758af6ebb70343993c608f9 189 SUPERFAMILY SSF89028 11 176 5.3E-43 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Afer_0722 6a3160e24758af6ebb70343993c608f9 189 Gene3D G3DSA:1.20.1200.10 21 187 1.8E-44 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Afer_0722 6a3160e24758af6ebb70343993c608f9 189 Pfam PF01923 Cobalamin adenosyltransferase 11 175 5.6E-46 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Afer_0722 6a3160e24758af6ebb70343993c608f9 189 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 12 177 2.7E-43 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Afer_0722 6a3160e24758af6ebb70343993c608f9 189 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 30 174 1.0E-20 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 Afer_0633 6f9d61ab14c33aaafc1631d8cca2313b 395 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 11 353 3.8E-119 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Afer_0633 6f9d61ab14c33aaafc1631d8cca2313b 395 Gene3D G3DSA:3.30.413.10 265 365 1.8E-33 T 14-10-2018 Afer_0633 6f9d61ab14c33aaafc1631d8cca2313b 395 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 9 360 32.58 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Afer_0633 6f9d61ab14c33aaafc1631d8cca2313b 395 Pfam PF04551 GcpE protein 14 355 2.6E-126 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Afer_0633 6f9d61ab14c33aaafc1631d8cca2313b 395 SUPERFAMILY SSF56014 269 356 3.63E-14 T 14-10-2018 Afer_0633 6f9d61ab14c33aaafc1631d8cca2313b 395 SUPERFAMILY SSF51717 38 210 1.26E-8 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0633 6f9d61ab14c33aaafc1631d8cca2313b 395 Gene3D G3DSA:3.20.20.20 2 263 4.3E-99 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 Afer_0633 6f9d61ab14c33aaafc1631d8cca2313b 395 PIRSF PIRSF004640 4 366 1.2E-134 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 Gene3D G3DSA:1.10.1380.10 43 437 3.5E-226 T 14-10-2018 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 460 472 5.2E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 554 565 5.2E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 442 454 5.2E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 481 497 5.2E-22 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 Pfam PF05649 Peptidase family M13 17 398 2.9E-89 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 Gene3D G3DSA:3.40.390.10 12 656 3.5E-226 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 SUPERFAMILY SSF55486 5 656 4.76E-202 T 14-10-2018 Afer_0811 1688ce457a907ebe07652b764b71e83e 658 Pfam PF01431 Peptidase family M13 450 653 2.3E-69 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 Afer_1556 9662df43ab57b8c3342f793321ebf986 252 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 237 7.5E-31 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Afer_1556 9662df43ab57b8c3342f793321ebf986 252 SUPERFAMILY SSF51695 6 243 1.02E-55 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Afer_1556 9662df43ab57b8c3342f793321ebf986 252 Gene3D G3DSA:3.20.20.190 6 249 7.8E-58 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Afer_1096 1b8232bd915d57d20ebcf85295dc1dde 213 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 199 34.579 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Afer_1096 1b8232bd915d57d20ebcf85295dc1dde 213 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 194 4.3E-39 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 Afer_1096 1b8232bd915d57d20ebcf85295dc1dde 213 Gene3D G3DSA:3.20.20.70 1 202 2.0E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1096 1b8232bd915d57d20ebcf85295dc1dde 213 SUPERFAMILY SSF51366 2 197 8.95E-47 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Afer_0669 ed175d2e50df219a4b5672936fc7a91a 160 Pfam PF03477 ATP cone domain 50 134 4.6E-12 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 Afer_0669 ed175d2e50df219a4b5672936fc7a91a 160 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 67.113 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Afer_0669 ed175d2e50df219a4b5672936fc7a91a 160 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 2 145 2.6E-45 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 Afer_1940 a16ba8398054874752d53886c6f3a685 369 SUPERFAMILY SSF47323 308 364 3.14E-14 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1940 a16ba8398054874752d53886c6f3a685 369 Gene3D G3DSA:3.40.50.880 1 242 4.9E-23 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1940 a16ba8398054874752d53886c6f3a685 369 Gene3D G3DSA:1.20.120.640 251 364 2.5E-15 T 14-10-2018 Afer_0148 ef38ad990d3f7057e61a0d45d476a027 258 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 5 56 2.0E-18 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain Afer_0148 ef38ad990d3f7057e61a0d45d476a027 258 Pfam PF00691 OmpA family 142 241 2.2E-15 T 14-10-2018 IPR006665 OmpA-like domain Afer_0148 ef38ad990d3f7057e61a0d45d476a027 258 SUPERFAMILY SSF103088 134 247 8.89E-30 T 14-10-2018 IPR036737 OmpA-like domain superfamily Afer_0148 ef38ad990d3f7057e61a0d45d476a027 258 Gene3D G3DSA:3.30.1330.60 98 257 1.5E-42 T 14-10-2018 IPR036737 OmpA-like domain superfamily Afer_0908 63995bc1d7c99393b97b23a525bfb8e7 497 Pfam PF03136 Pup-ligase protein 5 453 1.4E-167 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 Afer_0908 63995bc1d7c99393b97b23a525bfb8e7 497 TIGRFAM TIGR03688 pupylate_PafA2: proteasome accessory factor PafA2 5 484 2.2E-178 T 14-10-2018 IPR022366 Pup deamidase GO:0008233|GO:0016811 Afer_0908 63995bc1d7c99393b97b23a525bfb8e7 497 PIRSF PIRSF018077 10 495 1.1E-168 T 14-10-2018 IPR004347 Pup ligase/deamidase GO:0010498|GO:0019941 MetaCyc: PWY-7893 Afer_1716 7f106da5c8fe5f4cc607601b31595f92 153 SUPERFAMILY SSF52304 5 147 3.53E-52 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Afer_1716 7f106da5c8fe5f4cc607601b31595f92 153 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 144 9.2E-53 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Afer_1716 7f106da5c8fe5f4cc607601b31595f92 153 PIRSF PIRSF001399 2 148 3.7E-55 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Afer_1716 7f106da5c8fe5f4cc607601b31595f92 153 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 6 138 8.0E-32 T 14-10-2018 Afer_1716 7f106da5c8fe5f4cc607601b31595f92 153 Pfam PF01220 Dehydroquinase class II 6 141 3.0E-52 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Afer_1716 7f106da5c8fe5f4cc607601b31595f92 153 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 153 58.847 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Afer_1716 7f106da5c8fe5f4cc607601b31595f92 153 Gene3D G3DSA:3.40.50.9100 1 148 2.5E-56 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 Afer_1423 503284e8a5d66684c487b87e83bc225a 160 TIGRFAM TIGR02241 TIGR02241: conserved hypothetical phage tail region protein 10 158 6.4E-26 T 14-10-2018 IPR011747 Conserved hypothetical protein CHP02241 Afer_1423 503284e8a5d66684c487b87e83bc225a 160 Pfam PF06841 T4-like virus tail tube protein gp19 14 157 3.1E-29 T 14-10-2018 IPR010667 Bacteriophage T4, Gp19, tail tube GO:0005198 Afer_0412 f046a6f9f579aa81e8f084432b982bfc 136 SUPERFAMILY SSF56047 3 136 7.98E-43 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0412 f046a6f9f579aa81e8f084432b982bfc 136 Gene3D G3DSA:3.30.1370.30 4 80 7.8E-27 T 14-10-2018 Afer_0412 f046a6f9f579aa81e8f084432b982bfc 136 Pfam PF00410 Ribosomal protein S8 5 136 8.0E-49 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0412 f046a6f9f579aa81e8f084432b982bfc 136 ProSitePatterns PS00053 Ribosomal protein S8 signature. 106 123 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0412 f046a6f9f579aa81e8f084432b982bfc 136 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 136 32.114 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0412 f046a6f9f579aa81e8f084432b982bfc 136 Gene3D G3DSA:3.30.1490.10 81 136 1.6E-24 T 14-10-2018 Afer_2012 f0050cfb85811d7928c34b6ec6b42f7b 502 Gene3D G3DSA:1.25.40.80 123 311 6.8E-95 T 14-10-2018 Afer_2012 f0050cfb85811d7928c34b6ec6b42f7b 502 Gene3D G3DSA:1.10.579.10 315 435 1.3E-49 T 14-10-2018 Afer_2012 f0050cfb85811d7928c34b6ec6b42f7b 502 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 8 190 3.1E-48 T 14-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein Afer_2012 f0050cfb85811d7928c34b6ec6b42f7b 502 Gene3D G3DSA:3.40.50.620 9 222 6.8E-95 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold Afer_2012 f0050cfb85811d7928c34b6ec6b42f7b 502 Gene3D G3DSA:1.10.10.1710 436 502 7.2E-22 T 14-10-2018 Afer_2012 f0050cfb85811d7928c34b6ec6b42f7b 502 SUPERFAMILY SSF48173 222 485 8.63E-58 T 14-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 Afer_1572 d509a293bf6ed311f1042db70663ea09 307 Pfam PF01145 SPFH domain / Band 7 family 24 193 3.1E-29 T 14-10-2018 IPR001107 Band 7 domain Afer_1572 d509a293bf6ed311f1042db70663ea09 307 SUPERFAMILY SSF117892 52 184 1.02E-37 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily Afer_1572 d509a293bf6ed311f1042db70663ea09 307 Gene3D G3DSA:3.30.479.30 48 179 3.0E-43 T 14-10-2018 Afer_1572 d509a293bf6ed311f1042db70663ea09 307 PRINTS PR00721 Stomatin signature 27 49 1.9E-38 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Afer_1572 d509a293bf6ed311f1042db70663ea09 307 PRINTS PR00721 Stomatin signature 172 193 1.9E-38 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Afer_1572 d509a293bf6ed311f1042db70663ea09 307 PRINTS PR00721 Stomatin signature 129 152 1.9E-38 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Afer_1572 d509a293bf6ed311f1042db70663ea09 307 PRINTS PR00721 Stomatin signature 74 95 1.9E-38 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Afer_1572 d509a293bf6ed311f1042db70663ea09 307 PRINTS PR00721 Stomatin signature 153 171 1.9E-38 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Afer_1572 d509a293bf6ed311f1042db70663ea09 307 PRINTS PR00721 Stomatin signature 109 126 1.9E-38 T 14-10-2018 IPR001972 Stomatin family GO:0016020 Afer_1572 d509a293bf6ed311f1042db70663ea09 307 SMART SM00244 20 177 8.0E-50 T 14-10-2018 IPR001107 Band 7 domain Afer_1098 7d80f9f1c673fc0f375cb1d83a50e121 591 Pfam PF07690 Major Facilitator Superfamily 31 444 4.3E-37 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1098 7d80f9f1c673fc0f375cb1d83a50e121 591 Gene3D G3DSA:1.20.1250.20 16 219 7.5E-27 T 14-10-2018 Afer_1098 7d80f9f1c673fc0f375cb1d83a50e121 591 SUPERFAMILY SSF103473 20 560 3.01E-47 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1416 5d3ead61535ae1ac81a61d182656db19 174 Pfam PF09684 Phage tail protein (Tail_P2_I) 30 139 7.6E-10 T 14-10-2018 IPR006521 Tail protein I Afer_1416 5d3ead61535ae1ac81a61d182656db19 174 TIGRFAM TIGR02242 tail_TIGR02242: phage tail protein domain 9 113 4.4E-22 T 14-10-2018 IPR011748 Uncharacterised protein family, phage tail-like Afer_0770 76196373ecc2c531bbdbe906f2db1b3f 457 Gene3D G3DSA:2.40.50.140 66 160 5.4E-24 T 14-10-2018 Afer_0770 76196373ecc2c531bbdbe906f2db1b3f 457 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 48 455 9.9E-135 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 Afer_0770 76196373ecc2c531bbdbe906f2db1b3f 457 SUPERFAMILY SSF50249 75 160 3.43E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0770 76196373ecc2c531bbdbe906f2db1b3f 457 Pfam PF10150 Ribonuclease E/G family 156 427 4.1E-98 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 Afer_0789 7c1f016352d71bbd19252e29da53077d 172 Gene3D G3DSA:3.30.460.10 44 158 8.4E-29 T 14-10-2018 Afer_0789 7c1f016352d71bbd19252e29da53077d 172 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 51 146 1.7E-23 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Afer_0789 7c1f016352d71bbd19252e29da53077d 172 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 43 147 19.807 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS Afer_0789 7c1f016352d71bbd19252e29da53077d 172 SUPERFAMILY SSF81301 46 153 1.8E-28 T 14-10-2018 Afer_0789 7c1f016352d71bbd19252e29da53077d 172 Pfam PF02410 Ribosomal silencing factor during starvation 52 146 1.5E-22 T 14-10-2018 Afer_1910 a5f9a66cde6822a95c741c0da5bf4616 125 SUPERFAMILY SSF55620 4 117 1.45E-16 T 14-10-2018 Afer_1910 a5f9a66cde6822a95c741c0da5bf4616 125 SMART SM00905 5 117 9.6E-16 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Afer_1910 a5f9a66cde6822a95c741c0da5bf4616 125 TIGRFAM TIGR00526 folB_dom: FolB domain 5 119 5.8E-14 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Afer_1910 a5f9a66cde6822a95c741c0da5bf4616 125 Gene3D G3DSA:3.30.1130.10 3 119 2.0E-19 T 14-10-2018 Afer_1910 a5f9a66cde6822a95c741c0da5bf4616 125 Pfam PF02152 Dihydroneopterin aldolase 5 115 9.7E-21 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 Afer_1898 57c7c7e552fa9eabb04908d10f3cb8b7 523 Pfam PF00795 Carbon-nitrogen hydrolase 4 233 4.8E-28 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 Afer_1898 57c7c7e552fa9eabb04908d10f3cb8b7 523 Gene3D G3DSA:3.60.110.10 1 243 7.4E-49 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Afer_1898 57c7c7e552fa9eabb04908d10f3cb8b7 523 SUPERFAMILY SSF56317 1 236 6.28E-46 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily Afer_0365 dd4974d355fc07132df2368b33c6a5b9 146 Gene3D G3DSA:3.30.460.80 2 114 5.1E-31 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0365 dd4974d355fc07132df2368b33c6a5b9 146 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 79 132 2.0E-11 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0365 dd4974d355fc07132df2368b33c6a5b9 146 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 8 131 8.1E-39 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0365 dd4974d355fc07132df2368b33c6a5b9 146 SUPERFAMILY SSF143243 5 135 1.31E-41 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0429 f8a47065ea333d750d2e78552b2ac0d7 154 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 Afer_0429 f8a47065ea333d750d2e78552b2ac0d7 154 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 140 1.6E-62 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0429 f8a47065ea333d750d2e78552b2ac0d7 154 PIRSF PIRSF002181 1 151 4.0E-50 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Afer_0429 f8a47065ea333d750d2e78552b2ac0d7 154 Pfam PF00572 Ribosomal protein L13 15 137 7.6E-56 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Afer_0429 f8a47065ea333d750d2e78552b2ac0d7 154 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 143 28.842 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 Afer_0429 f8a47065ea333d750d2e78552b2ac0d7 154 SUPERFAMILY SSF52161 4 143 2.49E-58 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0429 f8a47065ea333d750d2e78552b2ac0d7 154 Gene3D G3DSA:3.90.1180.10 2 146 1.3E-61 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 Afer_0977 9ec4b5c5e9eb46bd019fce76f62652e5 212 Gene3D G3DSA:2.102.10.10 104 209 4.8E-20 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Afer_0977 9ec4b5c5e9eb46bd019fce76f62652e5 212 SUPERFAMILY SSF50022 100 208 5.89E-22 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 Afer_0977 9ec4b5c5e9eb46bd019fce76f62652e5 212 Pfam PF00355 Rieske [2Fe-2S] domain 110 195 3.6E-15 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 Afer_1695 4e51ade078c21ab5a957c74829cfb27e 180 SUPERFAMILY SSF52540 2 177 5.53E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1695 4e51ade078c21ab5a957c74829cfb27e 180 Pfam PF00625 Guanylate kinase 3 172 3.2E-28 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Afer_1695 4e51ade078c21ab5a957c74829cfb27e 180 Gene3D G3DSA:3.40.50.300 3 171 1.5E-48 T 14-10-2018 Afer_1695 4e51ade078c21ab5a957c74829cfb27e 180 Gene3D G3DSA:3.30.63.10 31 85 1.5E-48 T 14-10-2018 Afer_1695 4e51ade078c21ab5a957c74829cfb27e 180 SMART SM00072 2 176 9.3E-31 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit Afer_1306 e4e91646ec05dc9ee07a043b37f3a0df 287 SUPERFAMILY SSF51430 1 245 1.31E-38 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Afer_1306 e4e91646ec05dc9ee07a043b37f3a0df 287 Pfam PF00248 Aldo/keto reductase family 35 205 1.8E-19 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Afer_1306 e4e91646ec05dc9ee07a043b37f3a0df 287 Gene3D G3DSA:3.20.20.100 1 245 8.0E-43 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Afer_0383 3dbb53e74242b6b7a504b93cd1c8ccc6 54 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 54 1.3E-19 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0383 3dbb53e74242b6b7a504b93cd1c8ccc6 54 Gene3D G3DSA:2.20.28.120 1 54 3.1E-22 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0383 3dbb53e74242b6b7a504b93cd1c8ccc6 54 SUPERFAMILY SSF57829 4 54 6.71E-18 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 Afer_0383 3dbb53e74242b6b7a504b93cd1c8ccc6 54 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 17.668 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0383 3dbb53e74242b6b7a504b93cd1c8ccc6 54 Pfam PF00471 Ribosomal protein L33 8 54 1.4E-21 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1909 856beaebb8c37e23797a6f27015ac2de 161 SUPERFAMILY SSF55083 4 144 1.11E-40 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Afer_1909 856beaebb8c37e23797a6f27015ac2de 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 130 5.0E-34 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Afer_1909 856beaebb8c37e23797a6f27015ac2de 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 130 1.2E-32 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Afer_1909 856beaebb8c37e23797a6f27015ac2de 161 Gene3D G3DSA:3.30.70.560 3 147 1.0E-42 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 Afer_1412 295da8188128064049c6c15bead4851a 393 SUPERFAMILY SSF55031 213 302 3.84E-18 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain Afer_1412 295da8188128064049c6c15bead4851a 393 SUPERFAMILY SSF53187 5 392 1.28E-62 T 14-10-2018 Afer_1412 295da8188128064049c6c15bead4851a 393 PIRSF PIRSF001235 2 393 1.2E-99 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Afer_1412 295da8188128064049c6c15bead4851a 393 Gene3D G3DSA:3.30.70.360 208 314 1.5E-100 T 14-10-2018 Afer_1412 295da8188128064049c6c15bead4851a 393 Pfam PF01546 Peptidase family M20/M25/M40 71 390 1.4E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 Afer_1412 295da8188128064049c6c15bead4851a 393 Pfam PF07687 Peptidase dimerisation domain 215 300 2.0E-4 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain Afer_1412 295da8188128064049c6c15bead4851a 393 Gene3D G3DSA:3.40.630.10 16 386 1.5E-100 T 14-10-2018 Afer_1412 295da8188128064049c6c15bead4851a 393 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 6 389 3.3E-78 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 Afer_0591 69e5737956541c9a956e1c24f41f76b3 200 Gene3D G3DSA:3.30.420.10 2 199 1.2E-57 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_0591 69e5737956541c9a956e1c24f41f76b3 200 Pfam PF01351 Ribonuclease HII 11 190 4.5E-27 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain Afer_0591 69e5737956541c9a956e1c24f41f76b3 200 SUPERFAMILY SSF53098 7 198 1.5E-47 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_0871 1944dc4ccdd83fb81367829b1cad488a 404 SUPERFAMILY SSF55931 82 377 7.26E-65 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Afer_0871 1944dc4ccdd83fb81367829b1cad488a 404 SMART SM01230 82 310 5.2E-49 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0871 1944dc4ccdd83fb81367829b1cad488a 404 Gene3D G3DSA:3.30.590.10 79 386 9.4E-67 T 14-10-2018 Afer_0871 1944dc4ccdd83fb81367829b1cad488a 404 Pfam PF00120 Glutamine synthetase, catalytic domain 121 377 3.7E-56 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0959 f11e9062a23a8abb900b7a7ff0dc20e7 491 Gene3D G3DSA:3.50.50.60 5 369 6.8E-105 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0959 f11e9062a23a8abb900b7a7ff0dc20e7 491 Gene3D G3DSA:3.90.700.10 218 312 6.8E-105 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0959 f11e9062a23a8abb900b7a7ff0dc20e7 491 Pfam PF00890 FAD binding domain 5 357 6.9E-64 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0959 f11e9062a23a8abb900b7a7ff0dc20e7 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 9.4E-10 T 14-10-2018 Afer_0959 f11e9062a23a8abb900b7a7ff0dc20e7 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 9.4E-10 T 14-10-2018 Afer_0959 f11e9062a23a8abb900b7a7ff0dc20e7 491 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 320 342 9.4E-10 T 14-10-2018 Afer_0959 f11e9062a23a8abb900b7a7ff0dc20e7 491 SUPERFAMILY SSF51905 3 373 6.49E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0959 f11e9062a23a8abb900b7a7ff0dc20e7 491 SUPERFAMILY SSF56425 210 318 1.79E-23 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0211 6673e51cb59459efc20237c02eedf205 80 Gene3D G3DSA:3.30.70.1680 1 62 5.5E-26 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Afer_0211 6673e51cb59459efc20237c02eedf205 80 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 65 16.831 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Afer_0211 6673e51cb59459efc20237c02eedf205 80 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 8.0E-11 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Afer_0211 6673e51cb59459efc20237c02eedf205 80 TIGRFAM TIGR00202 csrA: carbon storage regulator 2 60 5.5E-24 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Afer_0211 6673e51cb59459efc20237c02eedf205 80 Pfam PF02599 Global regulator protein family 2 52 2.7E-23 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 Afer_0211 6673e51cb59459efc20237c02eedf205 80 SUPERFAMILY SSF117130 2 54 2.48E-18 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 Pfam PF11838 ERAP1-like C-terminal domain 524 832 3.3E-49 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 Gene3D G3DSA:1.25.50.20 540 852 1.7E-40 T 14-10-2018 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 Gene3D G3DSA:1.10.390.60 210 461 3.3E-95 T 14-10-2018 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 189 204 6.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 141 156 6.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 322 334 6.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 267 277 6.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 303 318 6.2E-27 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 SUPERFAMILY SSF55486 216 462 1.22E-85 T 14-10-2018 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 SUPERFAMILY SSF63737 6 205 2.48E-50 T 14-10-2018 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 Gene3D G3DSA:2.60.40.1730 3 207 5.0E-55 T 14-10-2018 Afer_0493 bd155b64646e9b4a159dc04ca223ae6f 852 Pfam PF01433 Peptidase family M1 domain 217 450 9.6E-82 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 Afer_0524 fc5b7ac9db4ae23424c7778cca39d48c 348 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 328 1.2E-106 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Afer_0524 fc5b7ac9db4ae23424c7778cca39d48c 348 PIRSF PIRSF000267 1 343 2.4E-119 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Afer_0524 fc5b7ac9db4ae23424c7778cca39d48c 348 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 6 218 1.9E-76 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 Afer_0764 fc6289d8501f7eeba3a2b107f15c841e 433 Gene3D G3DSA:3.90.190.20 299 425 7.0E-11 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_0764 fc6289d8501f7eeba3a2b107f15c841e 433 SUPERFAMILY SSF53623 31 276 1.42E-45 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_0764 fc6289d8501f7eeba3a2b107f15c841e 433 TIGRFAM TIGR01499 folC: bifunctional protein FolC 35 420 5.8E-53 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 Afer_0764 fc6289d8501f7eeba3a2b107f15c841e 433 Pfam PF08245 Mur ligase middle domain 54 199 5.9E-7 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Afer_0764 fc6289d8501f7eeba3a2b107f15c841e 433 Gene3D G3DSA:3.40.1190.10 12 296 1.2E-49 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 Afer_0764 fc6289d8501f7eeba3a2b107f15c841e 433 SUPERFAMILY SSF53244 301 419 6.18E-10 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 SUPERFAMILY SSF89550 4 281 9.02E-35 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 Pfam PF14579 Helix-hairpin-helix motif 836 927 2.0E-28 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 SMART SM00481 5 72 3.7E-29 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 SUPERFAMILY SSF160975 865 912 2.88E-5 T 14-10-2018 Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 316 761 2.6E-165 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 Gene3D G3DSA:3.20.20.140 1 287 9.5E-110 T 14-10-2018 Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 1064 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 Gene3D G3DSA:1.10.10.1600 450 539 6.2E-21 T 14-10-2018 Afer_1638 4d4c03ee43511856bb47240523a208bb 1189 Pfam PF02811 PHP domain 6 191 2.6E-50 T 14-10-2018 IPR004013 PHP domain GO:0003824 Afer_1733 a671035d03ac7cf78620ce2b9ee0a0c9 251 SUPERFAMILY SSF53474 3 250 4.9E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1733 a671035d03ac7cf78620ce2b9ee0a0c9 251 Pfam PF12697 Alpha/beta hydrolase family 17 242 1.3E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 Afer_1733 a671035d03ac7cf78620ce2b9ee0a0c9 251 Gene3D G3DSA:3.40.50.1820 2 249 6.6E-31 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0792 0ded9ff64db3c4c4e14b8959d6ace243 451 SUPERFAMILY SSF51569 7 449 1.23E-183 T 14-10-2018 Afer_0792 0ded9ff64db3c4c4e14b8959d6ace243 451 Pfam PF01474 Class-II DAHP synthetase family 9 446 1.6E-188 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Afer_0792 0ded9ff64db3c4c4e14b8959d6ace243 451 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 9 449 8.8E-199 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 Afer_0254 93f6c5c2b9335ea80caaf1bcbbb933c6 462 SUPERFAMILY SSF81340 47 457 1.07E-76 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Afer_0254 93f6c5c2b9335ea80caaf1bcbbb933c6 462 Pfam PF00654 Voltage gated chloride channel 124 445 2.2E-67 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_0254 93f6c5c2b9335ea80caaf1bcbbb933c6 462 PRINTS PR00762 Chloride channel signature 361 381 1.2E-20 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_0254 93f6c5c2b9335ea80caaf1bcbbb933c6 462 PRINTS PR00762 Chloride channel signature 198 217 1.2E-20 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_0254 93f6c5c2b9335ea80caaf1bcbbb933c6 462 PRINTS PR00762 Chloride channel signature 412 431 1.2E-20 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_0254 93f6c5c2b9335ea80caaf1bcbbb933c6 462 PRINTS PR00762 Chloride channel signature 394 410 1.2E-20 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_0254 93f6c5c2b9335ea80caaf1bcbbb933c6 462 PRINTS PR00762 Chloride channel signature 147 166 1.2E-20 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 Afer_0254 93f6c5c2b9335ea80caaf1bcbbb933c6 462 Gene3D G3DSA:1.10.3080.10 44 460 3.6E-69 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 Afer_1141 2cfdb1f5926b177b76998372893e0874 612 SUPERFAMILY SSF53850 62 610 2.17E-56 T 14-10-2018 Afer_1141 2cfdb1f5926b177b76998372893e0874 612 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 108 521 9.4E-42 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Afer_1141 2cfdb1f5926b177b76998372893e0874 612 Gene3D G3DSA:3.10.105.10 339 579 3.0E-29 T 14-10-2018 Afer_0523 6e280532c461cf78f6411cc5c41dcf57 556 Gene3D G3DSA:1.20.1560.10 13 317 6.7E-16 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_0523 6e280532c461cf78f6411cc5c41dcf57 556 SUPERFAMILY SSF90123 22 317 3.92E-23 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 Afer_0523 6e280532c461cf78f6411cc5c41dcf57 556 Pfam PF00005 ABC transporter 357 495 6.4E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0523 6e280532c461cf78f6411cc5c41dcf57 556 SMART SM00382 363 541 5.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0523 6e280532c461cf78f6411cc5c41dcf57 556 SUPERFAMILY SSF52540 356 542 8.75E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0523 6e280532c461cf78f6411cc5c41dcf57 556 Gene3D G3DSA:3.40.50.300 345 554 4.0E-41 T 14-10-2018 Afer_0523 6e280532c461cf78f6411cc5c41dcf57 556 ProSitePatterns PS00211 ABC transporters family signature. 467 481 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_2019 658e3c3e065178b8f68afe9be482269c 127 SUPERFAMILY SSF54913 4 104 5.56E-25 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Afer_2019 658e3c3e065178b8f68afe9be482269c 127 Gene3D G3DSA:3.30.70.120 2 116 1.4E-24 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Afer_2019 658e3c3e065178b8f68afe9be482269c 127 Pfam PF03091 CutA1 divalent ion tolerance protein 7 101 1.2E-24 T 14-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 SUPERFAMILY SSF52954 328 433 9.51E-33 T 14-10-2018 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 SUPERFAMILY SSF55681 7 344 2.11E-107 T 14-10-2018 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 Gene3D G3DSA:3.30.930.10 4 315 5.7E-115 T 14-10-2018 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 4 433 46.032 T 14-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 138 238 2.5E-7 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 Gene3D G3DSA:3.40.50.800 334 433 2.0E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 PRINTS PR01043 Glycyl-tRNA synthetase signature 378 397 5.2E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 PRINTS PR01043 Glycyl-tRNA synthetase signature 120 132 5.2E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 PRINTS PR01043 Glycyl-tRNA synthetase signature 173 190 5.2E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 PRINTS PR01043 Glycyl-tRNA synthetase signature 141 158 5.2E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 PRINTS PR01043 Glycyl-tRNA synthetase signature 190 200 5.2E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 PRINTS PR01043 Glycyl-tRNA synthetase signature 26 40 5.2E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 PRINTS PR01043 Glycyl-tRNA synthetase signature 297 309 5.2E-51 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 Afer_1263 883ae2844e90830a7e0d4d80c578811a 448 Pfam PF03129 Anticodon binding domain 342 430 1.3E-19 T 14-10-2018 IPR004154 Anticodon-binding Afer_0187 006672fee9d543a1d5f5518587011e8e 125 SUPERFAMILY SSF81343 7 124 2.83E-26 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0187 006672fee9d543a1d5f5518587011e8e 125 Gene3D G3DSA:1.20.1300.10 13 123 2.4E-24 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0187 006672fee9d543a1d5f5518587011e8e 125 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 14 110 1.9E-14 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 Afer_0554 9d5d80a0c00fc262b47d0be6485b6cbb 296 SUPERFAMILY SSF52980 148 262 3.16E-17 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Afer_0554 9d5d80a0c00fc262b47d0be6485b6cbb 296 Pfam PF04471 Restriction endonuclease 146 258 8.8E-30 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 Afer_0554 9d5d80a0c00fc262b47d0be6485b6cbb 296 Gene3D G3DSA:3.40.91.100 145 286 5.9E-15 T 14-10-2018 Afer_0554 9d5d80a0c00fc262b47d0be6485b6cbb 296 Pfam PF14338 Mrr N-terminal domain 9 93 7.6E-27 T 14-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain Afer_1493 fa730c20565aeb966d32c20159678635 244 Gene3D G3DSA:3.90.226.10 1 219 5.5E-53 T 14-10-2018 Afer_1493 fa730c20565aeb966d32c20159678635 244 SUPERFAMILY SSF52096 8 237 3.11E-52 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1493 fa730c20565aeb966d32c20159678635 244 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Afer_1493 fa730c20565aeb966d32c20159678635 244 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 212 1.7E-39 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_2030 7b5f9d3c462266c77b5e425a0707d3f0 306 SUPERFAMILY SSF109709 109 218 1.36E-33 T 14-10-2018 Afer_2030 7b5f9d3c462266c77b5e425a0707d3f0 306 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 23 199 4.2E-55 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 Afer_2030 7b5f9d3c462266c77b5e425a0707d3f0 306 SMART SM00470 27 116 8.6E-34 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Afer_2030 7b5f9d3c462266c77b5e425a0707d3f0 306 Pfam PF02195 ParB-like nuclease domain 28 115 2.0E-26 T 14-10-2018 IPR003115 ParB/Sulfiredoxin Afer_2030 7b5f9d3c462266c77b5e425a0707d3f0 306 Gene3D G3DSA:1.10.10.2830 103 217 5.3E-37 T 14-10-2018 Afer_2030 7b5f9d3c462266c77b5e425a0707d3f0 306 Gene3D G3DSA:3.90.1530.30 40 101 1.4E-27 T 14-10-2018 Afer_2030 7b5f9d3c462266c77b5e425a0707d3f0 306 SUPERFAMILY SSF110849 27 118 9.16E-29 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily Afer_2010 99922b2bf93d6f1786ec2496846c1ee6 140 Pfam PF11625 Protein of unknown function (DUF3253) 56 130 2.2E-27 T 14-10-2018 IPR021660 Protein of unknown function DUF3253 Afer_2010 99922b2bf93d6f1786ec2496846c1ee6 140 Gene3D G3DSA:1.10.10.10 50 133 1.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_2010 99922b2bf93d6f1786ec2496846c1ee6 140 SUPERFAMILY SSF46785 54 131 4.49E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_2010 99922b2bf93d6f1786ec2496846c1ee6 140 Pfam PF10013 Uncharacterized protein conserved in bacteria (DUF2256) 10 47 2.2E-19 T 14-10-2018 IPR017136 Uncharacterised conserved protein UCP037205 Afer_1176 d5f92e75545b51f5f2f1c04f9ecf87d8 183 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 2 175 24.966 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Afer_1176 d5f92e75545b51f5f2f1c04f9ecf87d8 183 PIRSF PIRSF001296 1 179 1.8E-49 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Afer_1176 d5f92e75545b51f5f2f1c04f9ecf87d8 183 Pfam PF02669 K+-transporting ATPase, c chain 6 173 5.5E-47 T 14-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Gene3D G3DSA:3.30.1330.10 417 564 7.0E-46 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 SUPERFAMILY SSF55326 8 184 5.53E-44 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Gene3D G3DSA:3.90.650.10 575 724 2.3E-11 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Pfam PF02769 AIR synthase related protein, C-terminal domain 602 713 1.9E-5 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Pfam PF02769 AIR synthase related protein, C-terminal domain 196 343 1.5E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 PIRSF PIRSF001587 1 720 4.1E-232 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Gene3D G3DSA:3.30.1330.10 38 185 3.5E-118 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 SUPERFAMILY SSF56042 581 718 1.64E-12 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Pfam PF00586 AIR synthase related protein, N-terminal domain 441 561 1.3E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Pfam PF00586 AIR synthase related protein, N-terminal domain 79 181 3.9E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 SUPERFAMILY SSF55326 420 561 1.05E-38 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 SUPERFAMILY SSF56042 194 394 8.82E-41 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 11 702 2.0E-215 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 734 223.408 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 Afer_1952 ae97cf5bdf44cf101746067d5eeff8a1 734 Gene3D G3DSA:3.90.650.10 23 341 3.5E-118 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily Afer_0664 e0be67e03711a9421ae301d2a29de1e4 108 Gene3D G3DSA:1.10.10.60 8 40 1.8E-8 T 14-10-2018 Afer_0664 e0be67e03711a9421ae301d2a29de1e4 108 SUPERFAMILY SSF46689 12 68 3.94E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0664 e0be67e03711a9421ae301d2a29de1e4 108 Pfam PF13551 Winged helix-turn helix 13 57 6.1E-8 T 14-10-2018 Afer_1407 8193004711552599aa73a2fd9119ecf0 129 Pfam PF04343 Protein of unknown function, DUF488 7 112 6.0E-23 T 14-10-2018 IPR007438 Protein of unknown function DUF488 Afer_1672 6ffc440d0854fd026ee8f0f47cf4eee1 281 Pfam PF01925 Sulfite exporter TauE/SafE 14 275 1.3E-50 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 Afer_1183 832c17b41e945e4bcb25b0b8e1b7e168 387 SUPERFAMILY SSF69572 108 350 1.83E-19 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 Afer_1183 832c17b41e945e4bcb25b0b8e1b7e168 387 Gene3D G3DSA:3.40.50.720 99 346 1.3E-26 T 14-10-2018 Afer_1183 832c17b41e945e4bcb25b0b8e1b7e168 387 Pfam PF00899 ThiF family 111 248 8.8E-16 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 Afer_1599 9ad49276e122a9315b337f5d72c7da12 364 Gene3D G3DSA:2.160.10.10 242 362 1.4E-19 T 14-10-2018 Afer_1599 9ad49276e122a9315b337f5d72c7da12 364 Gene3D G3DSA:3.90.550.10 3 241 1.5E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1599 9ad49276e122a9315b337f5d72c7da12 364 SUPERFAMILY SSF53448 1 320 1.46E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1599 9ad49276e122a9315b337f5d72c7da12 364 Pfam PF12804 MobA-like NTP transferase domain 4 144 1.1E-22 T 14-10-2018 IPR025877 MobA-like NTP transferase Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 249 6.5E-40 T 14-10-2018 Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 SUPERFAMILY SSF51735 9 251 8.53E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 Gene3D G3DSA:3.40.50.720 2 260 3.8E-57 T 14-10-2018 Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 140 156 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 2.3E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 9.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 9.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0377 bbb8de543b58fe74618cf53d8bab01ca 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 154 9.1E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0825 b155eda7df924766966a8220af53fec1 427 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 Afer_0825 b155eda7df924766966a8220af53fec1 427 Gene3D G3DSA:4.10.320.10 118 158 5.1E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Afer_0825 b155eda7df924766966a8220af53fec1 427 SUPERFAMILY SSF47005 116 158 2.09E-11 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 Afer_0825 b155eda7df924766966a8220af53fec1 427 Pfam PF00364 Biotin-requiring enzyme 4 73 3.7E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment Afer_0825 b155eda7df924766966a8220af53fec1 427 Gene3D G3DSA:2.40.50.100 1 94 1.6E-22 T 14-10-2018 Afer_0825 b155eda7df924766966a8220af53fec1 427 SUPERFAMILY SSF52777 191 422 2.16E-73 T 14-10-2018 Afer_0825 b155eda7df924766966a8220af53fec1 427 Gene3D G3DSA:3.30.559.10 187 424 3.6E-79 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 Afer_0825 b155eda7df924766966a8220af53fec1 427 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 196 423 8.6E-76 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 Afer_0825 b155eda7df924766966a8220af53fec1 427 Pfam PF02817 e3 binding domain 119 154 3.1E-15 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 Afer_0825 b155eda7df924766966a8220af53fec1 427 SUPERFAMILY SSF51230 2 90 1.14E-24 T 14-10-2018 IPR011053 Single hybrid motif Afer_1451 586efce130c1ef1036ba2b9a2bdfc48d 516 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 268 279 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_1451 586efce130c1ef1036ba2b9a2bdfc48d 516 Pfam PF12801 4Fe-4S binding domain 91 133 6.6E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_1451 586efce130c1ef1036ba2b9a2bdfc48d 516 Pfam PF12801 4Fe-4S binding domain 182 218 7.4E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_1451 586efce130c1ef1036ba2b9a2bdfc48d 516 Pfam PF12801 4Fe-4S binding domain 351 370 350.0 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_1292 6aaf3538ce9a02ab05b245a1a6e0ddb2 241 Gene3D G3DSA:3.40.1280.10 12 231 2.0E-22 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Afer_1292 6aaf3538ce9a02ab05b245a1a6e0ddb2 241 SUPERFAMILY SSF75217 82 227 8.5E-16 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Afer_1292 6aaf3538ce9a02ab05b245a1a6e0ddb2 241 Pfam PF04452 RNA methyltransferase 27 225 2.8E-21 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 Afer_1708 b9641dcf184c68c32d757d275be78a0a 320 Gene3D G3DSA:1.10.287.90 54 133 3.4E-6 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1708 b9641dcf184c68c32d757d275be78a0a 320 Gene3D G3DSA:2.60.40.2600 164 291 4.0E-33 T 14-10-2018 Afer_1708 b9641dcf184c68c32d757d275be78a0a 320 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 192 259 2.9E-11 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1708 b9641dcf184c68c32d757d275be78a0a 320 SUPERFAMILY SSF49503 164 284 8.52E-31 T 14-10-2018 IPR008972 Cupredoxin Afer_1708 b9641dcf184c68c32d757d275be78a0a 320 SUPERFAMILY SSF81464 38 134 3.6E-6 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1708 b9641dcf184c68c32d757d275be78a0a 320 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 210 259 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 SUPERFAMILY SSF69705 4 103 3.27E-28 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Gene3D G3DSA:3.30.1480.10 6 103 2.4E-33 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 SUPERFAMILY SSF50249 113 179 1.31E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 5 329 26.422 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 SMART SM00316 114 180 6.4E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Gene3D G3DSA:2.40.50.140 116 178 3.7E-21 T 14-10-2018 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Pfam PF08529 NusA N-terminal domain 69 105 7.5E-10 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Pfam PF08529 NusA N-terminal domain 7 62 2.1E-10 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Pfam PF13184 NusA-like KH domain 210 275 1.6E-24 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Gene3D G3DSA:3.30.300.20 258 329 1.5E-20 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Pfam PF00575 S1 RNA binding domain 115 174 1.0E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 8 320 1.1E-97 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 Gene3D G3DSA:3.30.300.20 179 257 5.5E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 SUPERFAMILY SSF54814 259 321 2.16E-11 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Afer_0636 a567b33bb88d7638ec31be3a5fb1a6ea 330 SUPERFAMILY SSF54814 180 258 1.77E-30 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Afer_0410 e5c76abc0ecf8df510843b7ada5641c9 189 Pfam PF00281 Ribosomal protein L5 32 88 1.2E-24 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0410 e5c76abc0ecf8df510843b7ada5641c9 189 Pfam PF00673 ribosomal L5P family C-terminus 93 185 9.7E-39 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0410 e5c76abc0ecf8df510843b7ada5641c9 189 PIRSF PIRSF002161 5 189 2.9E-56 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0410 e5c76abc0ecf8df510843b7ada5641c9 189 SUPERFAMILY SSF55282 11 186 6.83E-70 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0410 e5c76abc0ecf8df510843b7ada5641c9 189 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 9 187 41.486 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0410 e5c76abc0ecf8df510843b7ada5641c9 189 Gene3D G3DSA:3.30.1440.10 9 187 2.7E-74 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1926 4cc61d44e0a9c82b78e0b833a33f47cd 543 Pfam PF09852 Predicted membrane protein (DUF2079) 55 459 2.3E-18 T 14-10-2018 IPR018650 Sulfolobus virus STSV1, Orf64 Afer_0151 5db3bb976d63c92c7a8705a027981751 95 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 10 85 1.8E-30 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 Afer_0151 5db3bb976d63c92c7a8705a027981751 95 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 14 83 3.0E-26 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) Afer_0151 5db3bb976d63c92c7a8705a027981751 95 SUPERFAMILY SSF101801 10 87 2.09E-24 T 14-10-2018 IPR036429 SpoA-like superfamily Afer_0151 5db3bb976d63c92c7a8705a027981751 95 PRINTS PR00956 Flagellar motor switch protein FliN signature 30 46 9.6E-24 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Afer_0151 5db3bb976d63c92c7a8705a027981751 95 PRINTS PR00956 Flagellar motor switch protein FliN signature 46 59 9.6E-24 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Afer_0151 5db3bb976d63c92c7a8705a027981751 95 PRINTS PR00956 Flagellar motor switch protein FliN signature 13 29 9.6E-24 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Afer_0151 5db3bb976d63c92c7a8705a027981751 95 PRINTS PR00956 Flagellar motor switch protein FliN signature 59 74 9.6E-24 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 Afer_0151 5db3bb976d63c92c7a8705a027981751 95 Gene3D G3DSA:2.30.330.10 3 92 7.1E-33 T 14-10-2018 IPR036429 SpoA-like superfamily Afer_0858 b4b84a310e34e2e3934be948f9e0fec1 305 SUPERFAMILY SSF160240 204 275 1.31E-11 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 Afer_0858 b4b84a310e34e2e3934be948f9e0fec1 305 Gene3D G3DSA:1.20.1510.10 3 192 3.0E-12 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Afer_0858 b4b84a310e34e2e3934be948f9e0fec1 305 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 6 275 1.4E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Afer_0858 b4b84a310e34e2e3934be948f9e0fec1 305 Pfam PF01545 Cation efflux family 10 190 1.0E-12 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 Afer_0858 b4b84a310e34e2e3934be948f9e0fec1 305 SUPERFAMILY SSF161111 8 195 1.57E-15 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily Afer_1131 7a47c12b27d4ff088d43519b4c693359 327 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 34 261 1.5E-51 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related Afer_0937 9dc5d00f30b341924d59896a1ee85054 369 Pfam PF00534 Glycosyl transferases group 1 170 325 8.3E-28 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_0937 9dc5d00f30b341924d59896a1ee85054 369 Gene3D G3DSA:3.40.50.2000 5 161 2.2E-73 T 14-10-2018 Afer_0937 9dc5d00f30b341924d59896a1ee85054 369 Gene3D G3DSA:3.40.50.2000 162 327 2.2E-73 T 14-10-2018 Afer_0937 9dc5d00f30b341924d59896a1ee85054 369 Pfam PF13439 Glycosyltransferase Family 4 14 165 1.3E-6 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Afer_0937 9dc5d00f30b341924d59896a1ee85054 369 SUPERFAMILY SSF53756 2 361 6.28E-53 T 14-10-2018 Afer_0341 7a73b023c91ca241bec1793561e50651 508 Pfam PF00083 Sugar (and other) transporter 86 489 5.1E-36 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Afer_0341 7a73b023c91ca241bec1793561e50651 508 SUPERFAMILY SSF103473 33 500 1.44E-59 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_0504 92b2a2a9a1c0708001f6f012dce7b864 254 Pfam PF00005 ABC transporter 20 163 6.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0504 92b2a2a9a1c0708001f6f012dce7b864 254 SUPERFAMILY SSF52540 3 222 4.99E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0504 92b2a2a9a1c0708001f6f012dce7b864 254 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_0504 92b2a2a9a1c0708001f6f012dce7b864 254 Gene3D G3DSA:3.40.50.300 1 233 6.7E-56 T 14-10-2018 Afer_0504 92b2a2a9a1c0708001f6f012dce7b864 254 SMART SM00382 28 214 3.3E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0162 d1c98a5501a5cfe32e79b98595b38d2c 108 Gene3D G3DSA:3.40.250.10 3 102 1.7E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_0162 d1c98a5501a5cfe32e79b98595b38d2c 108 ProSitePatterns PS00380 Rhodanese signature 1. 29 40 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Afer_0162 d1c98a5501a5cfe32e79b98595b38d2c 108 SMART SM00450 3 98 8.1E-20 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_0162 d1c98a5501a5cfe32e79b98595b38d2c 108 Pfam PF00581 Rhodanese-like domain 17 94 9.3E-14 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_0162 d1c98a5501a5cfe32e79b98595b38d2c 108 SUPERFAMILY SSF52821 3 102 8.51E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1217 9c57b12c823af001857570862b371baa 164 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 8 157 1.8E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Afer_1217 9c57b12c823af001857570862b371baa 164 Gene3D G3DSA:3.30.420.10 6 163 3.2E-42 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1217 9c57b12c823af001857570862b371baa 164 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 6 159 34.001 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Afer_1217 9c57b12c823af001857570862b371baa 164 SUPERFAMILY SSF53098 6 161 2.1E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_1217 9c57b12c823af001857570862b371baa 164 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 8 155 1.2E-38 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Afer_1217 9c57b12c823af001857570862b371baa 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 66 82 1.4E-21 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Afer_1217 9c57b12c823af001857570862b371baa 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 9 22 1.4E-21 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Afer_1217 9c57b12c823af001857570862b371baa 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 144 156 1.4E-21 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Afer_1217 9c57b12c823af001857570862b371baa 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 112 131 1.4E-21 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Afer_1217 9c57b12c823af001857570862b371baa 164 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 88 104 1.4E-21 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 Afer_0608 dacd9e091dddfaa615c7b041ad2edcf8 237 SUPERFAMILY SSF52317 23 231 1.43E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0608 dacd9e091dddfaa615c7b041ad2edcf8 237 Pfam PF07722 Peptidase C26 20 214 9.0E-52 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 Afer_0608 dacd9e091dddfaa615c7b041ad2edcf8 237 Gene3D G3DSA:3.40.50.880 1 236 3.6E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1144 ac36952b4933db89df9d9723a54e900e 608 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 103 520 1.3E-41 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Afer_1144 ac36952b4933db89df9d9723a54e900e 608 Gene3D G3DSA:3.10.105.10 336 578 3.2E-29 T 14-10-2018 Afer_1144 ac36952b4933db89df9d9723a54e900e 608 SUPERFAMILY SSF53850 59 596 7.96E-55 T 14-10-2018 Afer_0892 c3fc0fc6705f240e63647a33edc03869 316 Gene3D G3DSA:3.40.1280.10 128 315 2.7E-33 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Afer_0892 c3fc0fc6705f240e63647a33edc03869 316 Pfam PF00588 SpoU rRNA Methylase family 139 310 1.6E-24 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Afer_0892 c3fc0fc6705f240e63647a33edc03869 316 SUPERFAMILY SSF75217 113 313 2.03E-30 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Afer_0892 c3fc0fc6705f240e63647a33edc03869 316 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 50 121 6.1E-6 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Afer_0892 c3fc0fc6705f240e63647a33edc03869 316 SUPERFAMILY SSF55315 19 122 1.41E-10 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Afer_1253 a25cd44e4a86af455c8571c790e6ffb1 140 Pfam PF02381 MraZ protein, putative antitoxin-like 11 81 1.1E-9 T 14-10-2018 IPR020603 MraZ domain Afer_1253 a25cd44e4a86af455c8571c790e6ffb1 140 Pfam PF02381 MraZ protein, putative antitoxin-like 85 134 1.5E-12 T 14-10-2018 IPR020603 MraZ domain Afer_1253 a25cd44e4a86af455c8571c790e6ffb1 140 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 140 32.408 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Afer_1253 a25cd44e4a86af455c8571c790e6ffb1 140 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 11 136 3.0E-19 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 Afer_1253 a25cd44e4a86af455c8571c790e6ffb1 140 SUPERFAMILY SSF89447 10 136 3.35E-33 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily Afer_1253 a25cd44e4a86af455c8571c790e6ffb1 140 Gene3D G3DSA:2.40.330.20 8 139 3.3E-33 T 14-10-2018 IPR038619 MraZ superfamily Afer_1113 d68a0373243f136283beabc5f5085e90 270 Pfam PF09335 SNARE associated Golgi protein 35 150 1.2E-8 T 14-10-2018 IPR032816 SNARE associated Golgi protein Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 Gene3D G3DSA:3.40.640.10 101 340 3.4E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 335 350 1.2E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 74 93 1.2E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 378 397 1.2E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 95 113 1.2E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 PRINTS PR00800 Aromatic-L-amino-acid decarboxylase signature 114 133 1.2E-8 T 14-10-2018 IPR010977 Aromatic-L-amino-acid decarboxylase GO:0006520|GO:0016831 Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 71 395 3.1E-57 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 SUPERFAMILY SSF53383 26 451 5.33E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 Gene3D G3DSA:3.90.1150.170 48 447 3.4E-106 T 14-10-2018 Afer_0076 51e473cea295bb27e37bdc1e67d053b1 458 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 281 302 - T 14-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 145 165 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 60 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 244 265 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 116 124 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 138 150 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 205 221 1.3E-77 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 305 1.1E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 8.0E-37 T 14-10-2018 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 8.0E-37 T 14-10-2018 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.0E-37 T 14-10-2018 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 8.0E-37 T 14-10-2018 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 8.0E-37 T 14-10-2018 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 316 4.1E-115 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 Afer_0030 1bd5dd534af786d7d7829604567232f3 320 Gene3D G3DSA:3.50.50.60 7 314 2.9E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0030 1bd5dd534af786d7d7829604567232f3 320 SUPERFAMILY SSF51905 3 315 7.9E-55 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0030 1bd5dd534af786d7d7829604567232f3 320 Gene3D G3DSA:3.50.50.60 132 255 2.9E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1782 9d344f2c037e7319c3fefd8953b63ec3 491 SUPERFAMILY SSF103473 94 479 3.79E-41 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1782 9d344f2c037e7319c3fefd8953b63ec3 491 Pfam PF07690 Major Facilitator Superfamily 100 330 1.2E-10 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1782 9d344f2c037e7319c3fefd8953b63ec3 491 Gene3D G3DSA:1.20.1250.20 91 481 8.7E-39 T 14-10-2018 Afer_1946 0f16ff38a69639142fbc1c71f71cf7bd 335 Pfam PF07238 PilZ domain 87 183 7.7E-7 T 14-10-2018 IPR009875 PilZ domain GO:0035438 Afer_1946 0f16ff38a69639142fbc1c71f71cf7bd 335 SUPERFAMILY SSF141371 87 181 2.12E-5 T 14-10-2018 Afer_1859 e59a0db175d570847a7e5ff5b5adfa48 549 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 123 542 3.3E-177 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Afer_1859 e59a0db175d570847a7e5ff5b5adfa48 549 Pfam PF01964 Radical SAM ThiC family 123 542 3.2E-179 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Afer_1859 e59a0db175d570847a7e5ff5b5adfa48 549 Gene3D G3DSA:3.20.20.540 169 479 6.5E-136 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Afer_1859 e59a0db175d570847a7e5ff5b5adfa48 549 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 122 548 84.296 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 Afer_1828 b640b40f1edb7ace675c17c3968cfbab 198 Pfam PF00510 Cytochrome c oxidase subunit III 23 195 8.8E-30 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1828 b640b40f1edb7ace675c17c3968cfbab 198 Gene3D G3DSA:1.20.120.80 20 198 8.9E-48 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_1828 b640b40f1edb7ace675c17c3968cfbab 198 SUPERFAMILY SSF81452 21 196 2.88E-52 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 Afer_0221 71768c369fe1eb09eaafa3a737597b8d 229 Gene3D G3DSA:3.40.50.880 3 226 6.8E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0221 71768c369fe1eb09eaafa3a737597b8d 229 Pfam PF03575 Peptidase family S51 7 195 6.6E-16 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Afer_0221 71768c369fe1eb09eaafa3a737597b8d 229 SUPERFAMILY SSF52317 32 206 1.26E-19 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0707 eaec4e38eec7bbcd1ecb171722191463 119 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 41 87 2.7E-17 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Afer_0707 eaec4e38eec7bbcd1ecb171722191463 119 Gene3D G3DSA:1.20.1290.10 1 113 3.0E-33 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Afer_0707 eaec4e38eec7bbcd1ecb171722191463 119 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 99 1.1E-18 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Afer_0707 eaec4e38eec7bbcd1ecb171722191463 119 SUPERFAMILY SSF69118 4 111 4.19E-28 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Afer_1747 96a7a6f7a2316df961a218808e76fe08 400 Gene3D G3DSA:3.40.50.300 30 263 2.3E-46 T 14-10-2018 Afer_1747 96a7a6f7a2316df961a218808e76fe08 400 SMART SM00382 52 226 5.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_1747 96a7a6f7a2316df961a218808e76fe08 400 SUPERFAMILY SSF52540 38 235 7.44E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_1747 96a7a6f7a2316df961a218808e76fe08 400 Pfam PF00005 ABC transporter 43 174 2.1E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_1985 61df415abbeed5674e1817d66f82dcb4 138 Pfam PF12802 MarR family 34 80 2.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 Afer_1985 61df415abbeed5674e1817d66f82dcb4 138 SUPERFAMILY SSF46785 34 89 1.01E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1985 61df415abbeed5674e1817d66f82dcb4 138 Gene3D G3DSA:1.10.10.10 8 99 8.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0878 220b7ae8e66c9f7680d2123c47ddf073 209 Gene3D G3DSA:1.25.40.340 7 208 5.4E-52 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Afer_0878 220b7ae8e66c9f7680d2123c47ddf073 209 SMART SM01120 34 207 1.4E-54 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Afer_0878 220b7ae8e66c9f7680d2123c47ddf073 209 Pfam PF02734 DAK2 domain 34 205 1.4E-44 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Afer_0878 220b7ae8e66c9f7680d2123c47ddf073 209 SUPERFAMILY SSF101473 9 205 2.09E-46 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 Afer_0878 220b7ae8e66c9f7680d2123c47ddf073 209 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 18 205 1.2E-55 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 Afer_0528 91c1b97cc0387824e9b1b099102b9e0b 266 PIRSF PIRSF005902 1 262 4.2E-60 T 14-10-2018 IPR001130 TatD family GO:0016788 Afer_0528 91c1b97cc0387824e9b1b099102b9e0b 266 SUPERFAMILY SSF51556 3 259 9.02E-68 T 14-10-2018 IPR032466 Metal-dependent hydrolase Afer_0528 91c1b97cc0387824e9b1b099102b9e0b 266 Pfam PF01026 TatD related DNase 6 257 5.8E-59 T 14-10-2018 IPR001130 TatD family GO:0016788 Afer_0528 91c1b97cc0387824e9b1b099102b9e0b 266 Gene3D G3DSA:3.20.20.140 1 260 2.6E-69 T 14-10-2018 Afer_0092 8944b34605be5aecdd4df7f3277065e1 219 Pfam PF12401 Protein of unknown function (DUF2662) 3 115 1.3E-25 T 14-10-2018 IPR022128 Domain of unknown function DUF3662 Afer_0092 8944b34605be5aecdd4df7f3277065e1 219 Gene3D G3DSA:3.30.2320.60 1 124 8.5E-20 T 14-10-2018 Afer_0092 8944b34605be5aecdd4df7f3277065e1 219 SUPERFAMILY SSF49879 136 216 6.31E-28 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 Afer_0092 8944b34605be5aecdd4df7f3277065e1 219 Pfam PF00498 FHA domain 146 210 4.8E-21 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Afer_0092 8944b34605be5aecdd4df7f3277065e1 219 SMART SM00240 145 195 2.6E-16 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 Afer_0092 8944b34605be5aecdd4df7f3277065e1 219 Gene3D G3DSA:2.60.200.20 125 218 7.6E-29 T 14-10-2018 Afer_1552 ab8d1c3521de8a0537a88162d8c865d5 145 Gene3D G3DSA:3.30.1050.10 46 135 5.9E-9 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Afer_1552 ab8d1c3521de8a0537a88162d8c865d5 145 SUPERFAMILY SSF55718 14 130 1.98E-7 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily Afer_0417 c0ea885976e7bbd58f0fa925ef713bb8 166 SUPERFAMILY SSF52080 6 147 1.13E-37 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily Afer_0417 c0ea885976e7bbd58f0fa925ef713bb8 166 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 4 147 18.941 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 Afer_0417 c0ea885976e7bbd58f0fa925ef713bb8 166 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 29 146 2.4E-30 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P Afer_0417 c0ea885976e7bbd58f0fa925ef713bb8 166 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 145 1.2E-40 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0417 c0ea885976e7bbd58f0fa925ef713bb8 166 Gene3D G3DSA:3.100.10.10 67 148 3.7E-20 T 14-10-2018 Afer_1899 03a9959284c5d9510c0dfd9c70a27112 251 SUPERFAMILY SSF75217 79 245 5.1E-37 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases Afer_1899 03a9959284c5d9510c0dfd9c70a27112 251 SUPERFAMILY SSF55315 17 87 7.3E-12 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Afer_1899 03a9959284c5d9510c0dfd9c70a27112 251 Gene3D G3DSA:3.30.1330.30 15 87 6.0E-9 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like Afer_1899 03a9959284c5d9510c0dfd9c70a27112 251 Pfam PF00588 SpoU rRNA Methylase family 101 241 2.6E-31 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 Afer_1899 03a9959284c5d9510c0dfd9c70a27112 251 SMART SM00967 18 91 1.2E-15 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Afer_1899 03a9959284c5d9510c0dfd9c70a27112 251 Gene3D G3DSA:3.40.1280.10 92 249 7.3E-44 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal Afer_1899 03a9959284c5d9510c0dfd9c70a27112 251 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 18 246 2.1E-49 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 Afer_1899 03a9959284c5d9510c0dfd9c70a27112 251 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 19 87 1.9E-16 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 SMART SM01400 9 125 5.2E-74 T 14-10-2018 Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 Gene3D G3DSA:3.40.50.2020 12 305 1.9E-117 T 14-10-2018 Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 SUPERFAMILY SSF53271 74 308 1.12E-57 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 10 318 1.4E-116 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 Gene3D G3DSA:3.40.50.2020 152 294 1.9E-117 T 14-10-2018 Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 Pfam PF14572 Phosphoribosyl synthetase-associated domain 201 317 7.1E-29 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 9 318 45.156 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 125 9.1E-48 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 Afer_1597 f535a641c8d6e36b15db64ae8de9080a 323 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 133 148 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 Afer_0231 0addfc77efaa60f2b74dc788e30cce87 518 SUPERFAMILY SSF52096 255 518 5.85E-92 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0231 0addfc77efaa60f2b74dc788e30cce87 518 Pfam PF01039 Carboxyl transferase domain 30 515 6.5E-192 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 Afer_0231 0addfc77efaa60f2b74dc788e30cce87 518 SUPERFAMILY SSF52096 4 258 2.65E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_0231 0addfc77efaa60f2b74dc788e30cce87 518 Gene3D G3DSA:3.90.226.10 2 260 8.9E-94 T 14-10-2018 Afer_0231 0addfc77efaa60f2b74dc788e30cce87 518 Gene3D G3DSA:3.90.226.10 261 518 3.4E-95 T 14-10-2018 Afer_1883 ab802333f9bed8e6106f0025776b8212 232 Gene3D G3DSA:3.40.50.1820 2 232 3.8E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1883 ab802333f9bed8e6106f0025776b8212 232 SUPERFAMILY SSF53474 27 216 6.82E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1189 7aeb4f30a6ecf0899a5eb793134708b0 95 SUPERFAMILY SSF116842 21 78 9.02E-5 T 14-10-2018 Afer_1565 98770b75fe3649a4fcd117af01dfa463 402 Pfam PF13478 XdhC Rossmann domain 230 375 1.2E-39 T 14-10-2018 IPR027051 XdhC Rossmann domain Afer_1565 98770b75fe3649a4fcd117af01dfa463 402 Gene3D G3DSA:3.40.50.720 229 381 5.8E-50 T 14-10-2018 Afer_1565 98770b75fe3649a4fcd117af01dfa463 402 Pfam PF02625 XdhC and CoxI family 11 71 1.5E-19 T 14-10-2018 IPR003777 XdhC- CoxI Afer_1473 b4ec2d9be64d41214224b0335c0f419d 327 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 56 286 2.4E-39 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related Afer_1434 6c3b63af8d8bac27709ea68649806465 460 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 Afer_1434 6c3b63af8d8bac27709ea68649806465 460 SUPERFAMILY SSF103473 8 448 4.32E-62 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1434 6c3b63af8d8bac27709ea68649806465 460 Pfam PF00083 Sugar (and other) transporter 31 448 3.9E-47 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 Afer_1321 3c5d93ea8a2041eb8836a49274b41c64 272 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 82 136 2.5E-5 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 Afer_1321 3c5d93ea8a2041eb8836a49274b41c64 272 Gene3D G3DSA:1.10.150.130 77 181 1.4E-18 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal Afer_1321 3c5d93ea8a2041eb8836a49274b41c64 272 SUPERFAMILY SSF56349 82 199 6.12E-17 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 Afer_0272 a4586947b019f5159ebb45494c574d84 1518 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 288 1321 0.0 T 14-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 Afer_0272 a4586947b019f5159ebb45494c574d84 1518 SUPERFAMILY SSF53223 716 912 6.58E-27 T 14-10-2018 Afer_0272 a4586947b019f5159ebb45494c574d84 1518 SUPERFAMILY SSF51735 901 1171 3.41E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1545 9b2d7035750d628d97ce498a421d202e 340 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 16 327 4.3E-129 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Afer_1545 9b2d7035750d628d97ce498a421d202e 340 Gene3D G3DSA:1.10.3730.40 183 338 2.8E-66 T 14-10-2018 Afer_1545 9b2d7035750d628d97ce498a421d202e 340 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 3.0E-69 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Afer_1545 9b2d7035750d628d97ce498a421d202e 340 Gene3D G3DSA:3.40.50.720 1 182 1.8E-73 T 14-10-2018 Afer_1545 9b2d7035750d628d97ce498a421d202e 340 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 42.874 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Afer_1545 9b2d7035750d628d97ce498a421d202e 340 SUPERFAMILY SSF48179 184 329 1.14E-64 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 Afer_1545 9b2d7035750d628d97ce498a421d202e 340 SUPERFAMILY SSF51735 3 183 9.24E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1545 9b2d7035750d628d97ce498a421d202e 340 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 326 2.2E-61 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Afer_1545 9b2d7035750d628d97ce498a421d202e 340 PIRSF PIRSF000116 3 208 4.1E-39 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Afer_1545 9b2d7035750d628d97ce498a421d202e 340 PIRSF PIRSF000116 203 332 2.8E-13 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 Afer_1329 7c71b621c900db473e369babe26628d4 279 Gene3D G3DSA:1.10.3720.10 3 270 9.8E-59 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1329 7c71b621c900db473e369babe26628d4 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 272 1.7E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_1329 7c71b621c900db473e369babe26628d4 279 SUPERFAMILY SSF161098 5 279 1.57E-69 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1108 dba5ec55662377e2ba5cc4f80e0adcb6 205 SUPERFAMILY SSF52317 5 201 8.74E-36 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1108 dba5ec55662377e2ba5cc4f80e0adcb6 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 5 199 2.6E-45 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Afer_1108 dba5ec55662377e2ba5cc4f80e0adcb6 205 Pfam PF00117 Glutamine amidotransferase class-I 41 187 2.2E-10 T 14-10-2018 IPR017926 Glutamine amidotransferase Afer_1108 dba5ec55662377e2ba5cc4f80e0adcb6 205 PIRSF PIRSF000495 3 203 2.9E-45 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 Afer_1108 dba5ec55662377e2ba5cc4f80e0adcb6 205 Gene3D G3DSA:3.40.50.880 2 204 7.3E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1852 6d168de452d8dc245e6226c03b47f840 195 Pfam PF12804 MobA-like NTP transferase domain 17 141 4.2E-10 T 14-10-2018 IPR025877 MobA-like NTP transferase Afer_1852 6d168de452d8dc245e6226c03b47f840 195 SUPERFAMILY SSF53448 16 133 1.81E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1852 6d168de452d8dc245e6226c03b47f840 195 Gene3D G3DSA:3.90.550.10 15 185 3.7E-12 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1097 f50dc4a1413f74eb20101084e77fe421 271 Gene3D G3DSA:3.20.20.70 1 266 9.7E-77 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1097 f50dc4a1413f74eb20101084e77fe421 271 SUPERFAMILY SSF51366 23 255 3.88E-58 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 Afer_1097 f50dc4a1413f74eb20101084e77fe421 271 Pfam PF00218 Indole-3-glycerol phosphate synthase 23 254 5.5E-60 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 Afer_1097 f50dc4a1413f74eb20101084e77fe421 271 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 51 66 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 Gene3D G3DSA:1.10.275.10 25 229 8.1E-162 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 Pfam PF00206 Lyase 18 300 2.3E-68 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 Gene3D G3DSA:1.20.200.10 119 443 8.1E-162 T 14-10-2018 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 Gene3D G3DSA:1.10.40.30 360 427 8.1E-162 T 14-10-2018 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 450 1.3E-159 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 SUPERFAMILY SSF48557 17 452 5.34E-119 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 448 38.382 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 3.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00149 Fumarate lyase superfamily signature 102 120 3.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 3.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00149 Fumarate lyase superfamily signature 275 291 3.1E-25 T 14-10-2018 IPR000362 Fumarate lyase family Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 Pfam PF14698 Argininosuccinate lyase C-terminal 363 408 1.0E-11 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00145 Argininosuccinate lyase family signature 142 162 4.6E-60 T 14-10-2018 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00145 Argininosuccinate lyase family signature 101 123 4.6E-60 T 14-10-2018 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 4.6E-60 T 14-10-2018 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00145 Argininosuccinate lyase family signature 310 329 4.6E-60 T 14-10-2018 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00145 Argininosuccinate lyase family signature 275 291 4.6E-60 T 14-10-2018 Afer_1658 746893fae592fba8b0ef636ae12fe3ee 466 PRINTS PR00145 Argininosuccinate lyase family signature 193 209 4.6E-60 T 14-10-2018 Afer_0331 066b13ef9ee6afe3156b1ffa20e899e6 322 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 2 319 53.293 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Afer_0331 066b13ef9ee6afe3156b1ffa20e899e6 322 Gene3D G3DSA:3.90.25.10 183 314 2.8E-137 T 14-10-2018 Afer_0331 066b13ef9ee6afe3156b1ffa20e899e6 322 Gene3D G3DSA:3.40.50.720 4 300 2.8E-137 T 14-10-2018 Afer_0331 066b13ef9ee6afe3156b1ffa20e899e6 322 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 309 1.5E-126 T 14-10-2018 IPR016040 NAD(P)-binding domain Afer_0331 066b13ef9ee6afe3156b1ffa20e899e6 322 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 2 316 1.1E-133 T 14-10-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 Afer_0331 066b13ef9ee6afe3156b1ffa20e899e6 322 SUPERFAMILY SSF51735 2 315 2.06E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1218 8168493506a2a50cdf8bee8702582096 153 SUPERFAMILY SSF52833 4 149 5.3E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_1218 8168493506a2a50cdf8bee8702582096 153 Pfam PF00578 AhpC/TSA family 7 127 3.4E-33 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Afer_1218 8168493506a2a50cdf8bee8702582096 153 PIRSF PIRSF000239 1 151 7.6E-27 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Afer_1218 8168493506a2a50cdf8bee8702582096 153 Gene3D G3DSA:3.40.30.10 1 151 1.1E-36 T 14-10-2018 Afer_1357 b74289ab685c86e81d2e2df71ea64629 188 Pfam PF04079 Segregation and condensation complex subunit ScpB 18 167 6.4E-32 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 Afer_1357 b74289ab685c86e81d2e2df71ea64629 188 Gene3D G3DSA:1.10.10.10 86 177 5.2E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1357 b74289ab685c86e81d2e2df71ea64629 188 SUPERFAMILY SSF46785 88 156 1.6E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0394 bbf25648bb62d0eb74f88f36a58d2e67 156 Gene3D G3DSA:1.10.455.10 2 156 3.8E-57 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Afer_0394 bbf25648bb62d0eb74f88f36a58d2e67 156 SUPERFAMILY SSF47973 2 149 3.14E-56 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily Afer_0394 bbf25648bb62d0eb74f88f36a58d2e67 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 8.3E-63 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Afer_0394 bbf25648bb62d0eb74f88f36a58d2e67 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 33.747 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 Afer_0394 bbf25648bb62d0eb74f88f36a58d2e67 156 PIRSF PIRSF002122 5 156 2.6E-55 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 Afer_0394 bbf25648bb62d0eb74f88f36a58d2e67 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.7E-59 T 14-10-2018 IPR023798 Ribosomal protein S7 domain Afer_1207 a7e65e01a6ff67d051ef60d00a2bf57a 392 Gene3D G3DSA:2.50.20.10 84 264 2.0E-16 T 14-10-2018 Afer_1207 a7e65e01a6ff67d051ef60d00a2bf57a 392 SUPERFAMILY SSF89392 120 262 4.71E-12 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX Afer_0025 dca746b5d1a5f4903a9d0a863bc9885e 235 Pfam PF00583 Acetyltransferase (GNAT) family 110 220 2.9E-16 T 14-10-2018 IPR000182 GNAT domain Afer_0025 dca746b5d1a5f4903a9d0a863bc9885e 235 Gene3D G3DSA:3.40.630.30 16 230 1.7E-31 T 14-10-2018 Afer_0025 dca746b5d1a5f4903a9d0a863bc9885e 235 SUPERFAMILY SSF55729 39 223 9.96E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_0458 1f1527d80f4f20c47f0856863db2013d 302 SUPERFAMILY SSF53850 89 255 2.66E-11 T 14-10-2018 Afer_0458 1f1527d80f4f20c47f0856863db2013d 302 Gene3D G3DSA:3.40.190.10 123 274 6.8E-12 T 14-10-2018 Afer_0227 56ea0309db71b00476116870c9cd8d9c 283 Pfam PF06053 Domain of unknown function (DUF929) 22 260 3.1E-35 T 14-10-2018 IPR009272 Protein of unknown function DUF929 Afer_0227 56ea0309db71b00476116870c9cd8d9c 283 SUPERFAMILY SSF52833 82 164 4.63E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_1054 7c36443c4b338f45608eb423bd84a64a 323 Gene3D G3DSA:3.20.20.70 39 286 3.4E-16 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 Afer_1054 7c36443c4b338f45608eb423bd84a64a 323 SUPERFAMILY SSF102114 34 259 1.03E-23 T 14-10-2018 Afer_1054 7c36443c4b338f45608eb423bd84a64a 323 SMART SM00729 41 244 9.3E-5 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 Afer_0197 fc9d780364b4adc77e89a697df63c2d7 318 Gene3D G3DSA:3.90.180.10 9 315 6.0E-105 T 14-10-2018 Afer_0197 fc9d780364b4adc77e89a697df63c2d7 318 Gene3D G3DSA:3.40.50.720 121 262 6.0E-105 T 14-10-2018 Afer_0197 fc9d780364b4adc77e89a697df63c2d7 318 SUPERFAMILY SSF51735 110 272 5.57E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0197 fc9d780364b4adc77e89a697df63c2d7 318 SUPERFAMILY SSF50129 8 139 6.24E-39 T 14-10-2018 IPR011032 GroES-like superfamily Afer_0197 fc9d780364b4adc77e89a697df63c2d7 318 SMART SM00829 10 316 7.3E-14 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 Afer_0197 fc9d780364b4adc77e89a697df63c2d7 318 Pfam PF00107 Zinc-binding dehydrogenase 149 253 8.9E-18 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 Afer_0197 fc9d780364b4adc77e89a697df63c2d7 318 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 87 4.6E-12 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 Afer_1934 2e724331969b826a831a0e119ca20a2a 317 Gene3D G3DSA:3.40.190.10 105 259 1.1E-30 T 14-10-2018 Afer_1934 2e724331969b826a831a0e119ca20a2a 317 Pfam PF13531 Bacterial extracellular solute-binding protein 27 292 3.8E-32 T 14-10-2018 Afer_1934 2e724331969b826a831a0e119ca20a2a 317 Gene3D G3DSA:3.40.190.10 28 287 1.1E-30 T 14-10-2018 Afer_1934 2e724331969b826a831a0e119ca20a2a 317 SUPERFAMILY SSF53850 28 299 2.39E-20 T 14-10-2018 Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 SUPERFAMILY SSF50129 1 95 6.69E-32 T 14-10-2018 IPR011032 GroES-like superfamily Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 Gene3D G3DSA:2.30.33.40 1 97 1.4E-37 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.485 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 6.6E-32 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 PRINTS PR00297 10kDa chaperonin signature 61 73 3.2E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 PRINTS PR00297 10kDa chaperonin signature 3 18 3.2E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 PRINTS PR00297 10kDa chaperonin signature 25 46 3.2E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 PRINTS PR00297 10kDa chaperonin signature 82 95 3.2E-28 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_0443 e77a91c641bf5cb99b37c03172e059b0 97 SMART SM00883 2 95 2.5E-50 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 Afer_1430 f09525caa923372826c6aef152752bff 532 Pfam PF09861 Domain of unknown function (DUF2088) 36 229 7.1E-44 T 14-10-2018 IPR018657 LarA-like, N-terminal GO:0050043 KEGG: 00620+5.1.2.1 Afer_1430 f09525caa923372826c6aef152752bff 532 Gene3D G3DSA:3.40.50.11440 47 268 1.3E-38 T 14-10-2018 Afer_1843 ff040b9edf96ae27bdacb00b538aa187 235 SUPERFAMILY SSF54909 38 233 9.38E-50 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel Afer_1843 ff040b9edf96ae27bdacb00b538aa187 235 Gene3D G3DSA:3.30.70.1100 112 234 9.4E-42 T 14-10-2018 Afer_1843 ff040b9edf96ae27bdacb00b538aa187 235 Pfam PF06778 Chlorite dismutase 39 223 1.4E-46 T 14-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase Afer_1843 ff040b9edf96ae27bdacb00b538aa187 235 Gene3D G3DSA:3.30.70.1030 35 111 5.4E-5 T 14-10-2018 Afer_2017 750e81214378329db4242d66e6d146ab 75 SUPERFAMILY SSF143120 2 39 4.97E-5 T 14-10-2018 IPR036165 YefM-like superfamily Afer_2017 750e81214378329db4242d66e6d146ab 75 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 2 43 3.0E-6 T 14-10-2018 Afer_0113 03a31c045c417dea7ef76832bfa32b7b 277 Gene3D G3DSA:1.20.1330.10 51 227 1.4E-36 T 14-10-2018 Afer_0113 03a31c045c417dea7ef76832bfa32b7b 277 SUPERFAMILY SSF64518 1 276 2.09E-61 T 14-10-2018 Afer_0113 03a31c045c417dea7ef76832bfa32b7b 277 Pfam PF00700 Bacterial flagellin C-terminal helical region 191 276 3.1E-13 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Afer_0113 03a31c045c417dea7ef76832bfa32b7b 277 PRINTS PR00207 Flagellin signature 76 95 9.8E-13 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Afer_0113 03a31c045c417dea7ef76832bfa32b7b 277 PRINTS PR00207 Flagellin signature 37 54 9.8E-13 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Afer_0113 03a31c045c417dea7ef76832bfa32b7b 277 PRINTS PR00207 Flagellin signature 112 135 9.8E-13 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 Afer_0113 03a31c045c417dea7ef76832bfa32b7b 277 Gene3D G3DSA:1.10.8.410 228 276 4.9E-17 T 14-10-2018 Afer_0113 03a31c045c417dea7ef76832bfa32b7b 277 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.8E-30 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 Afer_1666 a6df8d976543939da5eda54d811603e3 123 Pfam PF05656 Protein of unknown function (DUF805) 14 114 4.5E-32 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 Afer_0910 b7323aa1955ccb752cf7cd5faea2761f 273 Hamap MF_02113_B Proteasome subunit beta [prcB]. 4 273 43.281 T 14-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 Afer_0910 b7323aa1955ccb752cf7cd5faea2761f 273 SUPERFAMILY SSF56235 45 259 6.72E-54 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0910 b7323aa1955ccb752cf7cd5faea2761f 273 TIGRFAM TIGR03690 20S_bact_beta: proteasome, beta subunit 46 262 1.0E-95 T 14-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 Afer_0910 b7323aa1955ccb752cf7cd5faea2761f 273 Pfam PF00227 Proteasome subunit 48 228 4.0E-35 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 Afer_0910 b7323aa1955ccb752cf7cd5faea2761f 273 Gene3D G3DSA:3.60.20.10 51 273 3.3E-80 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0185 069d47a9a5c99678e57147d49d74ec93 246 Gene3D G3DSA:3.40.50.1820 5 242 7.9E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0185 069d47a9a5c99678e57147d49d74ec93 246 SUPERFAMILY SSF53474 7 245 8.93E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0185 069d47a9a5c99678e57147d49d74ec93 246 Pfam PF01738 Dienelactone hydrolase family 21 244 1.2E-44 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 Afer_1558 cd3ea59aedd0a41a133bd56fe8654b77 269 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 5 246 9.1E-31 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 Afer_0494 6a9714be27a85f09a35e05aaea392370 360 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 59 83 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Afer_0494 6a9714be27a85f09a35e05aaea392370 360 SUPERFAMILY SSF53613 4 315 3.27E-67 T 14-10-2018 IPR029056 Ribokinase-like Afer_0494 6a9714be27a85f09a35e05aaea392370 360 Gene3D G3DSA:3.40.1190.20 3 320 3.7E-72 T 14-10-2018 IPR029056 Ribokinase-like Afer_0494 6a9714be27a85f09a35e05aaea392370 360 Pfam PF00294 pfkB family carbohydrate kinase 51 315 5.6E-47 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB Afer_0494 6a9714be27a85f09a35e05aaea392370 360 PRINTS PR00990 Ribokinase signature 54 73 4.7E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Afer_0494 6a9714be27a85f09a35e05aaea392370 360 PRINTS PR00990 Ribokinase signature 202 217 4.7E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Afer_0494 6a9714be27a85f09a35e05aaea392370 360 PRINTS PR00990 Ribokinase signature 240 251 4.7E-5 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 Afer_0494 6a9714be27a85f09a35e05aaea392370 360 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 271 284 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 Afer_0659 41b96fac52bdd8e91740311ac4b21439 361 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 215 228 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Afer_0659 41b96fac52bdd8e91740311ac4b21439 361 Gene3D G3DSA:3.90.1150.10 18 351 4.3E-74 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0659 41b96fac52bdd8e91740311ac4b21439 361 Pfam PF00155 Aminotransferase class I and II 44 356 2.0E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 Afer_0659 41b96fac52bdd8e91740311ac4b21439 361 SUPERFAMILY SSF53383 13 357 3.9E-67 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0659 41b96fac52bdd8e91740311ac4b21439 361 Gene3D G3DSA:3.40.640.10 33 264 4.3E-74 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0830 26d537d1762d9fc3f1e1225cdedfb1fb 593 Pfam PF13692 Glycosyl transferases group 1 218 332 2.1E-8 T 14-10-2018 Afer_0830 26d537d1762d9fc3f1e1225cdedfb1fb 593 Gene3D G3DSA:3.40.50.2000 5 195 3.7E-5 T 14-10-2018 Afer_0830 26d537d1762d9fc3f1e1225cdedfb1fb 593 Gene3D G3DSA:3.40.50.2000 196 345 2.7E-18 T 14-10-2018 Afer_0830 26d537d1762d9fc3f1e1225cdedfb1fb 593 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 17 180 2.9E-14 T 14-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 Afer_0830 26d537d1762d9fc3f1e1225cdedfb1fb 593 SUPERFAMILY SSF53756 7 340 1.42E-26 T 14-10-2018 Afer_2025 474f4d658595b753dc3189baac19649c 504 Gene3D G3DSA:2.30.40.10 18 423 1.6E-98 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_2025 474f4d658595b753dc3189baac19649c 504 Pfam PF01979 Amidohydrolase family 62 417 3.5E-34 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 Afer_2025 474f4d658595b753dc3189baac19649c 504 Gene3D G3DSA:3.20.20.140 67 424 1.6E-98 T 14-10-2018 Afer_2025 474f4d658595b753dc3189baac19649c 504 SUPERFAMILY SSF51556 65 367 7.21E-54 T 14-10-2018 IPR032466 Metal-dependent hydrolase Afer_2025 474f4d658595b753dc3189baac19649c 504 SUPERFAMILY SSF51338 11 423 2.53E-23 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 Afer_0367 0cd214f2f1509bcb1b99850fe1b21388 208 SUPERFAMILY SSF52833 5 165 6.49E-47 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_0367 0cd214f2f1509bcb1b99850fe1b21388 208 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 13 155 8.8E-43 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0367 0cd214f2f1509bcb1b99850fe1b21388 208 Gene3D G3DSA:3.40.30.10 74 172 8.6E-25 T 14-10-2018 Afer_0367 0cd214f2f1509bcb1b99850fe1b21388 208 PIRSF PIRSF000216 3 208 4.2E-59 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 Afer_0367 0cd214f2f1509bcb1b99850fe1b21388 208 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 13 155 4.1E-45 T 14-10-2018 Afer_0367 0cd214f2f1509bcb1b99850fe1b21388 208 Gene3D G3DSA:1.10.10.1590 3 73 1.2E-21 T 14-10-2018 Afer_1851 d8b9c2bc5a17cc986986aa13d9063d92 162 SUPERFAMILY SSF46689 12 65 1.69E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1851 d8b9c2bc5a17cc986986aa13d9063d92 162 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 18 31 7.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1851 d8b9c2bc5a17cc986986aa13d9063d92 162 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 39 62 7.9E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1851 d8b9c2bc5a17cc986986aa13d9063d92 162 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 63 2.9E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 Afer_1851 d8b9c2bc5a17cc986986aa13d9063d92 162 Gene3D G3DSA:1.10.357.10 10 161 5.4E-17 T 14-10-2018 Afer_1092 38443647837ac53c71c41c56b7ba92a0 559 Pfam PF03109 ABC1 family 163 282 4.0E-27 T 14-10-2018 IPR004147 UbiB domain Afer_1092 38443647837ac53c71c41c56b7ba92a0 559 SUPERFAMILY SSF56112 147 364 9.98E-26 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Afer_1974 f96fb5aad5c4151a4e94e8fa215faa06 853 Gene3D G3DSA:3.90.550.10 419 655 4.2E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1974 f96fb5aad5c4151a4e94e8fa215faa06 853 SUPERFAMILY SSF53448 413 675 2.53E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1974 f96fb5aad5c4151a4e94e8fa215faa06 853 Pfam PF00535 Glycosyl transferase family 2 429 544 1.7E-13 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 Afer_1140 b00f8ec9fc74c74621215168ffd3833e 391 Gene3D G3DSA:1.20.1250.20 8 187 3.4E-15 T 14-10-2018 Afer_1140 b00f8ec9fc74c74621215168ffd3833e 391 SUPERFAMILY SSF103473 9 379 2.22E-35 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1140 b00f8ec9fc74c74621215168ffd3833e 391 Pfam PF07690 Major Facilitator Superfamily 22 180 2.8E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1140 b00f8ec9fc74c74621215168ffd3833e 391 Gene3D G3DSA:1.20.1250.20 198 384 3.3E-11 T 14-10-2018 Afer_0938 b0a314844f45694aa1a3b8246549fe8f 160 SUPERFAMILY SSF55961 5 148 6.57E-33 T 14-10-2018 Afer_0938 b0a314844f45694aa1a3b8246549fe8f 160 Gene3D G3DSA:3.30.530.20 4 148 9.6E-39 T 14-10-2018 IPR023393 START-like domain superfamily Afer_0938 b0a314844f45694aa1a3b8246549fe8f 160 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 138 5.1E-16 T 14-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 Afer_0812 595e0bc122ab564dd00861145eb41901 393 Pfam PF04209 homogentisate 1,2-dioxygenase 128 373 6.3E-9 T 14-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 Afer_0812 595e0bc122ab564dd00861145eb41901 393 Gene3D G3DSA:2.60.120.10 87 175 3.4E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold Afer_0812 595e0bc122ab564dd00861145eb41901 393 SUPERFAMILY SSF51182 6 385 1.81E-80 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily Afer_1381 dc1fb6b1e331e6f94f3be47516373f51 300 SUPERFAMILY SSF161098 27 290 1.19E-23 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1381 dc1fb6b1e331e6f94f3be47516373f51 300 Gene3D G3DSA:1.10.3720.10 28 299 1.9E-22 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1381 dc1fb6b1e331e6f94f3be47516373f51 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 160 294 6.5E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_1522 3a8fcb0cbec9c4617e3c386f40855d94 293 SUPERFAMILY SSF74650 5 287 3.14E-38 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 Afer_1522 3a8fcb0cbec9c4617e3c386f40855d94 293 Pfam PF01263 Aldose 1-epimerase 18 180 2.5E-24 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 Afer_1522 3a8fcb0cbec9c4617e3c386f40855d94 293 Gene3D G3DSA:2.70.98.10 13 291 2.2E-51 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 Afer_1582 0cd987b305694b3f5d6c74ee7c9f528f 244 Pfam PF10099 Anti-sigma-K factor rskA 57 239 3.2E-24 T 14-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 Afer_1582 0cd987b305694b3f5d6c74ee7c9f528f 244 Pfam PF13490 Putative zinc-finger 4 36 1.3E-6 T 14-10-2018 IPR027383 Putative zinc-finger Afer_1582 0cd987b305694b3f5d6c74ee7c9f528f 244 Gene3D G3DSA:1.10.10.1320 1 68 1.5E-10 T 14-10-2018 Afer_0695 e396976c22698bd0e10341ef452d7209 128 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 2 81 2.1E-14 T 14-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 Afer_0695 e396976c22698bd0e10341ef452d7209 128 Gene3D G3DSA:2.30.110.10 4 127 1.4E-31 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 Afer_0695 e396976c22698bd0e10341ef452d7209 128 TIGRFAM TIGR03618 Rv1155_F420: PPOX class probable F420-dependent enzyme 7 123 2.1E-32 T 14-10-2018 IPR019920 F420-binding domain, putative Afer_0695 e396976c22698bd0e10341ef452d7209 128 SUPERFAMILY SSF50475 3 125 2.99E-28 T 14-10-2018 Afer_0145 7313ce852b5ff4f529c8164e2d4050de 431 SUPERFAMILY SSF117143 92 392 1.1E-60 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like Afer_0145 7313ce852b5ff4f529c8164e2d4050de 431 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 413 5.0E-85 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G Afer_0145 7313ce852b5ff4f529c8164e2d4050de 431 Pfam PF07559 Flagellar basal body protein FlaE 188 312 4.6E-10 T 14-10-2018 IPR011491 Flagellar hook protein FlgE Afer_0145 7313ce852b5ff4f529c8164e2d4050de 431 Pfam PF00460 Flagella basal body rod protein 5 35 2.6E-7 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Afer_0145 7313ce852b5ff4f529c8164e2d4050de 431 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 352 430 9.0E-19 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain Afer_1772 2a0804613b26eb756d91447f04824573 228 Pfam PF04203 Sortase family 86 227 2.2E-14 T 14-10-2018 IPR005754 Sortase family Afer_1772 2a0804613b26eb756d91447f04824573 228 Gene3D G3DSA:2.40.260.10 76 228 4.4E-20 T 14-10-2018 IPR023365 Sortase domain superfamily Afer_1772 2a0804613b26eb756d91447f04824573 228 SUPERFAMILY SSF63817 78 227 1.2E-11 T 14-10-2018 IPR023365 Sortase domain superfamily Afer_0404 6b57110a797209f68e5fee74cbca888e 288 Pfam PF07650 KH domain 38 110 2.3E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0404 6b57110a797209f68e5fee74cbca888e 288 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.8E-90 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Afer_0404 6b57110a797209f68e5fee74cbca888e 288 SUPERFAMILY SSF54821 108 206 6.67E-36 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0404 6b57110a797209f68e5fee74cbca888e 288 SUPERFAMILY SSF54814 2 106 6.28E-35 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 Afer_0404 6b57110a797209f68e5fee74cbca888e 288 SMART SM00322 59 125 9.6E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 Afer_0404 6b57110a797209f68e5fee74cbca888e 288 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.8E-35 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0404 6b57110a797209f68e5fee74cbca888e 288 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_0404 6b57110a797209f68e5fee74cbca888e 288 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 37.168 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 Afer_0404 6b57110a797209f68e5fee74cbca888e 288 Gene3D G3DSA:3.30.300.20 17 107 9.8E-29 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta Afer_0404 6b57110a797209f68e5fee74cbca888e 288 Gene3D G3DSA:3.30.1140.32 108 208 2.1E-39 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 SUPERFAMILY SSF52096 25 199 4.97E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 PRINTS PR00127 Clp protease catalytic subunit P signature 96 113 6.8E-44 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 PRINTS PR00127 Clp protease catalytic subunit P signature 25 40 6.8E-44 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 PRINTS PR00127 Clp protease catalytic subunit P signature 117 136 6.8E-44 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 PRINTS PR00127 Clp protease catalytic subunit P signature 65 85 6.8E-44 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 PRINTS PR00127 Clp protease catalytic subunit P signature 174 193 6.8E-44 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 Pfam PF00574 Clp protease 24 198 6.4E-75 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 2 199 38.839 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 118 131 - T 14-10-2018 IPR033135 ClpP, histidine active site Afer_1749 cdbd3332cc4b2b3ec0215c348905f10e 211 Gene3D G3DSA:3.90.226.10 15 202 9.9E-71 T 14-10-2018 Afer_1884 46b8fd151eaa64463e79f6e3338c29a8 164 Gene3D G3DSA:3.90.1170.40 5 150 4.7E-36 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Afer_1884 46b8fd151eaa64463e79f6e3338c29a8 164 Pfam PF02391 MoaE protein 19 129 4.3E-30 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Afer_1884 46b8fd151eaa64463e79f6e3338c29a8 164 SUPERFAMILY SSF54690 19 149 1.83E-30 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 Afer_1806 27372a9ac60e2d11a8a028894d7a2338 225 Pfam PF01300 Telomere recombination 28 207 3.2E-30 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 Afer_1806 27372a9ac60e2d11a8a028894d7a2338 225 SUPERFAMILY SSF55821 20 220 5.19E-37 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily Afer_1806 27372a9ac60e2d11a8a028894d7a2338 225 Gene3D G3DSA:3.90.870.10 13 217 1.9E-44 T 14-10-2018 Afer_1237 f972d39f0d870d2d81a97115b89a4079 89 Pfam PF02325 YGGT family 10 83 5.7E-18 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 Afer_0804 912fbb38c61928678b8a0c97a87629fc 173 PIRSF PIRSF015617 5 173 7.7E-62 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Afer_0804 912fbb38c61928678b8a0c97a87629fc 173 SUPERFAMILY SSF52540 6 173 2.92E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0804 912fbb38c61928678b8a0c97a87629fc 173 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 7 173 5.0E-59 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Afer_0804 912fbb38c61928678b8a0c97a87629fc 173 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 7 173 8.0E-60 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 Afer_0804 912fbb38c61928678b8a0c97a87629fc 173 Gene3D G3DSA:3.40.50.300 4 173 4.2E-63 T 14-10-2018 Afer_0575 aed5f56dd78b840470ac8edb77833ac9 454 PIRSF PIRSF000521 18 400 3.6E-27 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0575 aed5f56dd78b840470ac8edb77833ac9 454 Gene3D G3DSA:3.90.1150.10 12 447 7.1E-160 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_0575 aed5f56dd78b840470ac8edb77833ac9 454 SUPERFAMILY SSF53383 12 448 1.57E-126 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_0575 aed5f56dd78b840470ac8edb77833ac9 454 Pfam PF00202 Aminotransferase class-III 30 446 4.5E-96 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0575 aed5f56dd78b840470ac8edb77833ac9 454 Gene3D G3DSA:3.40.640.10 65 339 7.1E-160 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_0575 aed5f56dd78b840470ac8edb77833ac9 454 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 252 289 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 Afer_0686 05f0a9d154fdf1a18a685f3b46eefda2 253 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 46 235 1.3E-42 T 14-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 Afer_0686 05f0a9d154fdf1a18a685f3b46eefda2 253 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 37 230 4.2E-43 T 14-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 Afer_1351 b5cce7355645e53341c60fdb8bc16373 200 Pfam PF02224 Cytidylate kinase 2 188 7.8E-31 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 Afer_1351 b5cce7355645e53341c60fdb8bc16373 200 Gene3D G3DSA:3.40.50.300 1 196 1.1E-37 T 14-10-2018 Afer_1351 b5cce7355645e53341c60fdb8bc16373 200 SUPERFAMILY SSF52540 1 187 9.55E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0565 799a7e70d382321f630652eb5fbeac1f 63 Gene3D G3DSA:3.30.70.20 1 63 4.5E-20 T 14-10-2018 Afer_0565 799a7e70d382321f630652eb5fbeac1f 63 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 5 60 7.9E-16 T 14-10-2018 Afer_0565 799a7e70d382321f630652eb5fbeac1f 63 PRINTS PR00352 3Fe-4S ferredoxin signature 16 26 6.2E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Afer_0565 799a7e70d382321f630652eb5fbeac1f 63 PRINTS PR00352 3Fe-4S ferredoxin signature 47 59 6.2E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Afer_0565 799a7e70d382321f630652eb5fbeac1f 63 PRINTS PR00352 3Fe-4S ferredoxin signature 5 16 6.2E-5 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 Afer_0565 799a7e70d382321f630652eb5fbeac1f 63 SUPERFAMILY SSF54862 2 62 4.91E-13 T 14-10-2018 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 SUPERFAMILY SSF46785 2 67 2.45E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 95 149 5.0E-7 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 TIGRFAM TIGR01529 argR_whole: arginine repressor 6 151 4.7E-41 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 Pfam PF01316 Arginine repressor, DNA binding domain 3 67 2.1E-23 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 Gene3D G3DSA:1.10.10.10 3 68 5.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 PRINTS PR01467 Bacterial arginine repressor signature 22 35 2.1E-21 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 PRINTS PR01467 Bacterial arginine repressor signature 38 53 2.1E-21 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 PRINTS PR01467 Bacterial arginine repressor signature 121 136 2.1E-21 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 PRINTS PR01467 Bacterial arginine repressor signature 91 104 2.1E-21 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 Gene3D G3DSA:3.30.1360.40 74 152 1.7E-22 T 14-10-2018 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 Pfam PF02863 Arginine repressor, C-terminal domain 83 149 1.5E-19 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 Hamap MF_00173 Arginine repressor [argR]. 1 155 52.656 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 Afer_1660 2894468c5c30f8dadd30bbc61a4c50c5 160 SUPERFAMILY SSF55252 83 150 2.35E-15 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 Afer_0416 ede5e1b992cb21dab9ff76bbe2b30d4c 63 SUPERFAMILY SSF55129 4 59 2.88E-17 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Afer_0416 ede5e1b992cb21dab9ff76bbe2b30d4c 63 Pfam PF00327 Ribosomal protein L30p/L7e 5 55 5.3E-16 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain Afer_0416 ede5e1b992cb21dab9ff76bbe2b30d4c 63 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 18.624 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0416 ede5e1b992cb21dab9ff76bbe2b30d4c 63 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 6 59 8.1E-23 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0416 ede5e1b992cb21dab9ff76bbe2b30d4c 63 Gene3D G3DSA:3.30.1390.20 1 59 2.6E-22 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily Afer_0416 ede5e1b992cb21dab9ff76bbe2b30d4c 63 PIRSF PIRSF002211 1 61 1.1E-24 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1977 707422bfd6b324ff8ba2751599a863a3 655 Gene3D G3DSA:2.130.10.10 82 318 1.3E-5 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Afer_1977 707422bfd6b324ff8ba2751599a863a3 655 SUPERFAMILY SSF50952 239 626 2.09E-9 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 Afer_1977 707422bfd6b324ff8ba2751599a863a3 655 SUPERFAMILY SSF63829 61 336 7.85E-16 T 14-10-2018 Afer_0887 32e9b0733c68d609a22fd38c7790a425 313 Gene3D G3DSA:1.10.3720.10 83 303 6.9E-25 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0887 32e9b0733c68d609a22fd38c7790a425 313 SUPERFAMILY SSF161098 91 294 6.76E-19 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0887 32e9b0733c68d609a22fd38c7790a425 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 1.9E-37 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_1601 3c19fa648d1dbcfbf90abc12c279ba55 506 SUPERFAMILY SSF52518 341 503 2.84E-24 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_1601 3c19fa648d1dbcfbf90abc12c279ba55 506 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 377 493 3.1E-18 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 Afer_1601 3c19fa648d1dbcfbf90abc12c279ba55 506 Gene3D G3DSA:3.40.50.970 331 506 2.1E-30 T 14-10-2018 Afer_1601 3c19fa648d1dbcfbf90abc12c279ba55 506 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 2 165 9.7E-30 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 Afer_1601 3c19fa648d1dbcfbf90abc12c279ba55 506 Gene3D G3DSA:3.40.50.970 1 169 2.1E-31 T 14-10-2018 Afer_1601 3c19fa648d1dbcfbf90abc12c279ba55 506 SUPERFAMILY SSF52518 2 173 1.91E-32 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold Afer_1922 188a014d190e0d3972311be5c8db4216 777 Pfam PF13520 Amino acid permease 60 474 3.4E-24 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1922 188a014d190e0d3972311be5c8db4216 777 Gene3D G3DSA:1.20.1740.10 52 517 1.4E-24 T 14-10-2018 Afer_1922 188a014d190e0d3972311be5c8db4216 777 Gene3D G3DSA:2.40.50.140 684 775 8.6E-9 T 14-10-2018 Afer_1376 33737568fc2683e5d936a82f0ba5c21f 335 SUPERFAMILY SSF47240 3 269 6.9E-33 T 14-10-2018 IPR009078 Ferritin-like superfamily Afer_1376 33737568fc2683e5d936a82f0ba5c21f 335 Pfam PF11583 P-aminobenzoate N-oxygenase AurF 86 275 5.5E-10 T 14-10-2018 IPR025859 P-aminobenzoate N-oxygenase AurF Afer_1376 33737568fc2683e5d936a82f0ba5c21f 335 Gene3D G3DSA:1.10.620.20 9 243 5.7E-8 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 Afer_0020 7356bea7913be8694bebb1f785a72c32 543 SMART SM00495 414 462 0.082 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Afer_0020 7356bea7913be8694bebb1f785a72c32 543 SMART SM00495 482 530 0.0011 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Afer_0020 7356bea7913be8694bebb1f785a72c32 543 Gene3D G3DSA:2.10.10.20 412 465 3.1E-7 T 14-10-2018 Afer_0020 7356bea7913be8694bebb1f785a72c32 543 Gene3D G3DSA:2.10.10.20 482 532 1.8E-6 T 14-10-2018 Afer_0020 7356bea7913be8694bebb1f785a72c32 543 Gene3D G3DSA:3.20.20.80 75 395 5.5E-76 T 14-10-2018 Afer_0020 7356bea7913be8694bebb1f785a72c32 543 SUPERFAMILY SSF51055 413 463 9.81E-9 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Afer_0020 7356bea7913be8694bebb1f785a72c32 543 SUPERFAMILY SSF51055 480 530 7.59E-8 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 Afer_0020 7356bea7913be8694bebb1f785a72c32 543 SUPERFAMILY SSF51445 85 356 1.66E-13 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_0245 cce279a9797f117927d97c9456bb68d2 426 Gene3D G3DSA:2.70.70.10 210 368 4.4E-5 T 14-10-2018 IPR011055 Duplicated hybrid motif Afer_0245 cce279a9797f117927d97c9456bb68d2 426 SUPERFAMILY SSF51261 159 366 1.83E-5 T 14-10-2018 IPR011055 Duplicated hybrid motif Afer_1224 cfc04a9419bd82eb4c17c8c457cfcb08 234 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 14 225 1.0E-24 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 Afer_0262 b6f47d6649028f1eea13eb4f2ed69c02 167 SUPERFAMILY SSF52833 6 157 4.95E-42 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_0262 b6f47d6649028f1eea13eb4f2ed69c02 167 Pfam PF00578 AhpC/TSA family 10 136 1.5E-30 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Afer_0262 b6f47d6649028f1eea13eb4f2ed69c02 167 PIRSF PIRSF000239 2 165 2.1E-23 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 Afer_0262 b6f47d6649028f1eea13eb4f2ed69c02 167 Gene3D G3DSA:3.40.30.10 8 160 3.1E-40 T 14-10-2018 Afer_0324 9fde4e0745ac4ed97b1ac31c820449d2 284 Gene3D G3DSA:3.20.20.220 1 279 2.4E-63 T 14-10-2018 Afer_0324 9fde4e0745ac4ed97b1ac31c820449d2 284 Pfam PF02219 Methylenetetrahydrofolate reductase 8 276 2.4E-44 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 Afer_0324 9fde4e0745ac4ed97b1ac31c820449d2 284 SUPERFAMILY SSF51730 6 277 6.47E-59 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like Afer_0318 576748d6b7872486ac960787c916fb18 162 SUPERFAMILY SSF52242 19 150 4.58E-49 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Afer_0318 576748d6b7872486ac960787c916fb18 162 Gene3D G3DSA:3.40.50.280 12 160 1.0E-56 T 14-10-2018 Afer_0318 576748d6b7872486ac960787c916fb18 162 Pfam PF02310 B12 binding domain 27 136 8.6E-24 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Afer_0318 576748d6b7872486ac960787c916fb18 162 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 26 153 7.5E-50 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_0610 f98f81c2203ac6dc1869b61ebea9c2f8 134 Pfam PF00717 Peptidase S24-like 22 70 1.7E-6 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C Afer_0610 f98f81c2203ac6dc1869b61ebea9c2f8 134 SUPERFAMILY SSF51306 20 114 7.46E-16 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily Afer_0610 f98f81c2203ac6dc1869b61ebea9c2f8 134 Gene3D G3DSA:2.10.109.10 15 119 5.3E-9 T 14-10-2018 Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 1.4E-23 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 SUPERFAMILY SSF55658 1 55 1.17E-15 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 Gene3D G3DSA:3.10.430.100 60 149 1.2E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 Gene3D G3DSA:3.40.5.10 1 52 3.6E-19 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.37 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 8.8E-36 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 SUPERFAMILY SSF55653 59 148 5.49E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily Afer_0042 0abacd1f7f3d33edc2d8a0e80092112b 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 42 2.0E-18 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1445 e23d9712bf847b247acf9b328095c390 215 SUPERFAMILY SSF109755 8 199 7.22E-31 T 14-10-2018 Afer_1445 e23d9712bf847b247acf9b328095c390 215 Pfam PF01895 PhoU domain 12 97 1.3E-12 T 14-10-2018 IPR026022 PhoU domain Afer_1445 e23d9712bf847b247acf9b328095c390 215 Pfam PF01895 PhoU domain 115 195 1.4E-13 T 14-10-2018 IPR026022 PhoU domain Afer_1445 e23d9712bf847b247acf9b328095c390 215 Gene3D G3DSA:1.20.58.220 4 204 1.8E-36 T 14-10-2018 IPR038078 PhoU-like domain superfamily Afer_1432 10981ca17706c965d6dcd9dbc452455b 770 Gene3D G3DSA:1.20.1440.100 552 627 1.1E-49 T 14-10-2018 Afer_1432 10981ca17706c965d6dcd9dbc452455b 770 SUPERFAMILY SSF56784 538 751 1.59E-20 T 14-10-2018 IPR036412 HAD-like superfamily Afer_1432 10981ca17706c965d6dcd9dbc452455b 770 Gene3D G3DSA:3.40.50.1000 540 749 1.1E-49 T 14-10-2018 IPR023214 HAD superfamily Afer_1432 10981ca17706c965d6dcd9dbc452455b 770 Pfam PF12710 haloacid dehalogenase-like hydrolase 541 725 2.7E-22 T 14-10-2018 Afer_1432 10981ca17706c965d6dcd9dbc452455b 770 SUPERFAMILY SSF51735 10 381 1.05E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1432 10981ca17706c965d6dcd9dbc452455b 770 Pfam PF07993 Male sterility protein 13 344 1.7E-58 T 14-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 Afer_0071 245226bfcba78897a91ccb95fccbfac2 1034 Pfam PF16640 Bacterial Ig-like domain (group 3) 751 837 3.7E-8 T 14-10-2018 IPR032109 Bacterial Ig-like domain (group 3) Afer_0071 245226bfcba78897a91ccb95fccbfac2 1034 Pfam PF16640 Bacterial Ig-like domain (group 3) 648 741 3.0E-14 T 14-10-2018 IPR032109 Bacterial Ig-like domain (group 3) Afer_0071 245226bfcba78897a91ccb95fccbfac2 1034 Pfam PF16640 Bacterial Ig-like domain (group 3) 436 529 8.1E-16 T 14-10-2018 IPR032109 Bacterial Ig-like domain (group 3) Afer_0071 245226bfcba78897a91ccb95fccbfac2 1034 Gene3D G3DSA:2.60.40.10 433 529 1.2E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold Afer_0441 55a391eb6e555e76db1449a8502f0841 167 Gene3D G3DSA:3.40.630.30 1 150 2.9E-39 T 14-10-2018 Afer_0441 55a391eb6e555e76db1449a8502f0841 167 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 141 1.2E-34 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 Afer_0441 55a391eb6e555e76db1449a8502f0841 167 Pfam PF00583 Acetyltransferase (GNAT) family 23 121 1.3E-11 T 14-10-2018 IPR000182 GNAT domain Afer_0441 55a391eb6e555e76db1449a8502f0841 167 SUPERFAMILY SSF55729 1 143 1.77E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_0867 e7f53ec8561e8714d04ba3a1368877fc 487 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 30 453 3.8E-49 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Afer_0867 e7f53ec8561e8714d04ba3a1368877fc 487 Gene3D G3DSA:1.10.4160.10 22 458 2.3E-32 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily Afer_0867 e7f53ec8561e8714d04ba3a1368877fc 487 PIRSF PIRSF002744 1 479 4.2E-101 T 14-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 Afer_1369 af31b82ce797a51407a521f9cd614923 82 Pfam PF11127 Protein of unknown function (DUF2892) 18 68 1.6E-7 T 14-10-2018 IPR021309 Protein of unknown function DUF2892 Afer_1034 90361591a4a838ed6a489389b028aead 262 Gene3D G3DSA:3.90.226.10 1 197 1.7E-52 T 14-10-2018 Afer_1034 90361591a4a838ed6a489389b028aead 262 SUPERFAMILY SSF52096 6 253 4.23E-64 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1034 90361591a4a838ed6a489389b028aead 262 Gene3D G3DSA:1.10.12.10 199 253 4.4E-11 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal Afer_1034 90361591a4a838ed6a489389b028aead 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 252 2.2E-41 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_0872 904e6541f2aa4b5b78c348e61ac58894 525 Gene3D G3DSA:1.20.1740.10 6 510 5.8E-40 T 14-10-2018 Afer_0872 904e6541f2aa4b5b78c348e61ac58894 525 PIRSF PIRSF006060 1 510 6.8E-45 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_0872 904e6541f2aa4b5b78c348e61ac58894 525 Pfam PF13520 Amino acid permease 11 452 1.8E-16 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_0743 5445b2e6e80ae9d70d25da7667ce1a0a 354 Gene3D G3DSA:3.40.50.2000 169 329 9.3E-24 T 14-10-2018 Afer_0743 5445b2e6e80ae9d70d25da7667ce1a0a 354 SUPERFAMILY SSF53756 7 352 3.77E-44 T 14-10-2018 Afer_0743 5445b2e6e80ae9d70d25da7667ce1a0a 354 Gene3D G3DSA:3.40.50.2000 12 168 8.9E-6 T 14-10-2018 Afer_0743 5445b2e6e80ae9d70d25da7667ce1a0a 354 Pfam PF13439 Glycosyltransferase Family 4 15 165 3.4E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 Afer_0743 5445b2e6e80ae9d70d25da7667ce1a0a 354 Pfam PF00534 Glycosyl transferases group 1 185 327 5.3E-14 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_1938 2a1b7d61d37c039f2ece3b463af4b0cd 946 SUPERFAMILY SSF46785 881 934 4.21E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_1938 2a1b7d61d37c039f2ece3b463af4b0cd 946 Pfam PF13476 AAA domain 8 51 1.6E-8 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain Afer_1938 2a1b7d61d37c039f2ece3b463af4b0cd 946 Gene3D G3DSA:3.40.50.300 641 853 4.4E-13 T 14-10-2018 Afer_1938 2a1b7d61d37c039f2ece3b463af4b0cd 946 SUPERFAMILY SSF52540 2 840 1.78E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0452 7f65168f347fa1c9115dce0c1d4749eb 352 Pfam PF04203 Sortase family 70 189 3.2E-14 T 14-10-2018 IPR005754 Sortase family Afer_0452 7f65168f347fa1c9115dce0c1d4749eb 352 Gene3D G3DSA:2.40.260.10 49 199 1.3E-21 T 14-10-2018 IPR023365 Sortase domain superfamily Afer_0452 7f65168f347fa1c9115dce0c1d4749eb 352 SUPERFAMILY SSF63817 61 192 2.16E-18 T 14-10-2018 IPR023365 Sortase domain superfamily Afer_0300 085a981d6c749c49737e51638b540c0d 270 PIRSF PIRSF006648 2 269 2.9E-56 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Afer_0300 085a981d6c749c49737e51638b540c0d 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 27 48 7.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Afer_0300 085a981d6c749c49737e51638b540c0d 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 57 79 7.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Afer_0300 085a981d6c749c49737e51638b540c0d 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 138 162 7.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Afer_0300 085a981d6c749c49737e51638b540c0d 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 175 194 7.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Afer_0300 085a981d6c749c49737e51638b540c0d 270 PRINTS PR00164 ABC-2 type transport system membrane protein signature 195 214 7.9E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Afer_0300 085a981d6c749c49737e51638b540c0d 270 Pfam PF01061 ABC-2 type transporter 9 217 3.6E-37 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Afer_0800 47430dfa081bb267b49b3677efc9cffe 194 SUPERFAMILY SSF63965 5 190 2.88E-45 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Afer_0800 47430dfa081bb267b49b3677efc9cffe 194 Pfam PF02570 Precorrin-8X methylmutase 9 188 1.7E-46 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 Afer_0800 47430dfa081bb267b49b3677efc9cffe 194 Gene3D G3DSA:3.40.50.10230 2 194 1.0E-48 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 Afer_0893 61fc3a6df1213d8899c532a9ff86e8ee 281 Gene3D G3DSA:1.40.20.10 113 246 1.5E-8 T 14-10-2018 IPR038186 CHAD domain superfamily Afer_0893 61fc3a6df1213d8899c532a9ff86e8ee 281 Pfam PF05235 CHAD domain 32 213 7.1E-13 T 14-10-2018 IPR007899 CHAD domain Afer_0893 61fc3a6df1213d8899c532a9ff86e8ee 281 SMART SM00880 18 239 4.4E-6 T 14-10-2018 IPR007899 CHAD domain Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 17 399 2.9E-59 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 Pfam PF01514 Secretory protein of YscJ/FliF family 33 222 2.4E-59 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 PRINTS PR01009 Flagellar M-ring protein signature 198 216 2.4E-15 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 PRINTS PR01009 Flagellar M-ring protein signature 336 360 2.4E-15 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 PRINTS PR01009 Flagellar M-ring protein signature 122 140 2.4E-15 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 PRINTS PR01009 Flagellar M-ring protein signature 154 168 2.4E-15 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 Pfam PF08345 Flagellar M-ring protein C-terminal 252 399 1.1E-27 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 PIRSF PIRSF004862 4 511 3.1E-109 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 Afer_0137 5a9eeb802ca338efbb2966d75eb18ee3 513 Gene3D G3DSA:3.30.300.30 120 226 5.4E-12 T 14-10-2018 Afer_2007 b3ca312c59eec573d09ba520e1ad4503 384 Pfam PF09623 CRISPR-associated protein NE0113 (Cas_NE0113) 19 207 6.8E-30 T 14-10-2018 IPR019092 CRISPR-assoc protein, NE0113/Csx13 Afer_2007 b3ca312c59eec573d09ba520e1ad4503 384 TIGRFAM TIGR02584 cas_NE0113: CRISPR-associated protein, NE0113 family 12 206 1.0E-37 T 14-10-2018 IPR013413 CRISPR-associated protein, NE0113 Afer_1075 ef57c23982101273252754adbf2124c5 172 SUPERFAMILY SSF51161 3 146 9.43E-41 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily Afer_1075 ef57c23982101273252754adbf2124c5 172 Gene3D G3DSA:2.160.10.10 2 170 2.2E-49 T 14-10-2018 Afer_1075 ef57c23982101273252754adbf2124c5 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 10 45 1.7E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Afer_1075 ef57c23982101273252754adbf2124c5 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 123 1.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat Afer_1180 40f13ccdebe6ac1310fd05732cc41270 418 Gene3D G3DSA:1.20.1250.20 11 195 8.6E-9 T 14-10-2018 Afer_1180 40f13ccdebe6ac1310fd05732cc41270 418 Gene3D G3DSA:1.20.1250.20 213 401 3.6E-11 T 14-10-2018 Afer_1180 40f13ccdebe6ac1310fd05732cc41270 418 Pfam PF07690 Major Facilitator Superfamily 245 396 2.1E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 Afer_1180 40f13ccdebe6ac1310fd05732cc41270 418 SUPERFAMILY SSF103473 13 401 5.36E-26 T 14-10-2018 IPR036259 MFS transporter superfamily Afer_1967 5b81cab569f4ed10f04640b44827df75 455 Gene3D G3DSA:3.10.20.70 23 114 4.6E-7 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_1967 5b81cab569f4ed10f04640b44827df75 455 Pfam PF00120 Glutamine synthetase, catalytic domain 123 441 2.9E-61 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_1967 5b81cab569f4ed10f04640b44827df75 455 SMART SM01230 122 371 2.6E-68 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_1967 5b81cab569f4ed10f04640b44827df75 455 SUPERFAMILY SSF55931 122 444 2.06E-72 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Afer_1967 5b81cab569f4ed10f04640b44827df75 455 Gene3D G3DSA:3.30.590.10 119 451 2.2E-82 T 14-10-2018 Afer_1967 5b81cab569f4ed10f04640b44827df75 455 SUPERFAMILY SSF54368 27 122 1.44E-5 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 Afer_0581 1eaee3aacf9d7410f11e30ecc78c4214 413 SUPERFAMILY SSF51905 15 407 6.48E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_0581 1eaee3aacf9d7410f11e30ecc78c4214 413 Pfam PF01593 Flavin containing amine oxidoreductase 26 272 1.6E-18 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 Afer_0581 1eaee3aacf9d7410f11e30ecc78c4214 413 Gene3D G3DSA:3.90.660.50 94 363 5.2E-24 T 14-10-2018 Afer_0581 1eaee3aacf9d7410f11e30ecc78c4214 413 Gene3D G3DSA:3.50.50.60 19 372 5.2E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily Afer_1056 8a2be4222cf7f922d456a8fa61142af0 359 Gene3D G3DSA:3.30.930.10 30 264 2.9E-22 T 14-10-2018 Afer_1056 8a2be4222cf7f922d456a8fa61142af0 359 SUPERFAMILY SSF55681 26 261 2.65E-26 T 14-10-2018 Afer_0993 bc069f91f8c64e986dfa1628182f7de0 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 330 2.1E-34 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Afer_0191 a06f308f69b422469ad5941b9d95ec2e 305 Pfam PF00005 ABC transporter 21 160 2.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 Afer_0191 a06f308f69b422469ad5941b9d95ec2e 305 SUPERFAMILY SSF52540 4 223 2.38E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0191 a06f308f69b422469ad5941b9d95ec2e 305 Gene3D G3DSA:3.40.50.300 1 232 1.9E-53 T 14-10-2018 Afer_0191 a06f308f69b422469ad5941b9d95ec2e 305 SMART SM00382 29 209 5.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain Afer_0191 a06f308f69b422469ad5941b9d95ec2e 305 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 Gene3D G3DSA:3.40.50.720 11 246 1.1E-39 T 14-10-2018 Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 189 0.0039 T 14-10-2018 Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 SUPERFAMILY SSF51735 11 249 3.55E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1741 8777728aed0e21cb76f5b6be906c3f62 252 Pfam PF00106 short chain dehydrogenase 11 199 8.5E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_0635 f470445d555f21cc38b76694e2425b40 159 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 5 140 12.631 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 Afer_1002 d0448d456bf307ba4502e3581c33477f 362 Gene3D G3DSA:3.30.390.50 265 352 2.6E-8 T 14-10-2018 Afer_1002 d0448d456bf307ba4502e3581c33477f 362 SUPERFAMILY SSF55681 4 247 6.15E-47 T 14-10-2018 Afer_1002 d0448d456bf307ba4502e3581c33477f 362 Gene3D G3DSA:3.30.930.10 2 248 8.5E-38 T 14-10-2018 Afer_1181 ad02a1cb90925d202dc894c5dce33d57 469 Pfam PF13520 Amino acid permease 18 428 1.8E-22 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1181 ad02a1cb90925d202dc894c5dce33d57 469 PIRSF PIRSF006060 1 458 5.2E-41 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1181 ad02a1cb90925d202dc894c5dce33d57 469 Gene3D G3DSA:1.20.1740.10 15 462 2.0E-33 T 14-10-2018 Afer_0473 b0b7acd82b5e8a07afc8887ce56aa05c 445 Gene3D G3DSA:3.30.2290.10 1 220 1.9E-37 T 14-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal Afer_0473 b0b7acd82b5e8a07afc8887ce56aa05c 445 SUPERFAMILY SSF111283 4 445 4.32E-80 T 14-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 Afer_0473 b0b7acd82b5e8a07afc8887ce56aa05c 445 Pfam PF01523 Putative modulator of DNA gyrase 20 308 7.1E-46 T 14-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 Afer_1669 72524658d43f21bc72d04ed487f1194a 313 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 4 290 3.5E-44 T 14-10-2018 IPR007296 Domain of unknown function DUF403 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 69 87 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 290 381 2.1E-12 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 229 246 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 Gene3D G3DSA:2.40.37.10 27 420 4.1E-133 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 Gene3D G3DSA:3.20.20.10 48 289 4.1E-133 T 14-10-2018 IPR029066 PLP-binding barrel Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 29 424 36.325 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 SUPERFAMILY SSF51419 40 291 1.74E-63 T 14-10-2018 IPR029066 PLP-binding barrel Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01181 Diaminopimelate decarboxylase signature 173 182 7.1E-22 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01181 Diaminopimelate decarboxylase signature 308 326 7.1E-22 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01181 Diaminopimelate decarboxylase signature 87 104 7.1E-22 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01181 Diaminopimelate decarboxylase signature 391 413 7.1E-22 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 69 87 4.7E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 89 101 4.7E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 200 213 4.7E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 279 298 4.7E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 381 394 4.7E-18 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 49 289 7.8E-49 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 22 424 9.7E-118 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 Afer_1814 b81023bbfb82a277398ac8628d9ed8e9 426 SUPERFAMILY SSF50621 269 424 6.07E-45 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Afer_1007 29572c2d880508a6244607aaf5717f3b 445 Pfam PF01565 FAD binding domain 41 177 5.7E-31 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Afer_1007 29572c2d880508a6244607aaf5717f3b 445 SUPERFAMILY SSF56176 18 215 1.78E-46 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_1007 29572c2d880508a6244607aaf5717f3b 445 Gene3D G3DSA:3.30.465.40 18 230 1.6E-48 T 14-10-2018 Afer_1007 29572c2d880508a6244607aaf5717f3b 445 Pfam PF02913 FAD linked oxidases, C-terminal domain 291 439 6.0E-26 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 Afer_1007 29572c2d880508a6244607aaf5717f3b 445 Gene3D G3DSA:1.10.45.10 402 441 1.8E-5 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 Afer_1007 29572c2d880508a6244607aaf5717f3b 445 SUPERFAMILY SSF55103 189 443 2.45E-30 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 Afer_1007 29572c2d880508a6244607aaf5717f3b 445 Gene3D G3DSA:3.30.70.2740 323 401 4.6E-9 T 14-10-2018 Afer_1267 e1a6818f6f43c08cec31b68251ba78c1 151 Gene3D G3DSA:2.40.128.20 5 151 2.0E-42 T 14-10-2018 IPR012674 Calycin Afer_1267 e1a6818f6f43c08cec31b68251ba78c1 151 SUPERFAMILY SSF50814 6 150 2.21E-30 T 14-10-2018 IPR012674 Calycin Afer_1267 e1a6818f6f43c08cec31b68251ba78c1 151 Pfam PF08768 Domain of unknown function (DUF1794) 6 150 7.0E-35 T 14-10-2018 IPR014878 Domain of unknown function DUF1794 Afer_1419 f67dd2fa629b7f35ce86bbb6004aabfc 882 Pfam PF13699 Domain of unknown function (DUF4157) 616 681 4.6E-9 T 14-10-2018 IPR025295 Domain of unknown function DUF4157 Afer_1239 c6357134544c479516af33a9758ce3b0 230 Pfam PF01168 Alanine racemase, N-terminal domain 18 215 2.2E-13 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 Afer_1239 c6357134544c479516af33a9758ce3b0 230 SUPERFAMILY SSF51419 7 212 2.09E-43 T 14-10-2018 IPR029066 PLP-binding barrel Afer_1239 c6357134544c479516af33a9758ce3b0 230 PIRSF PIRSF004848 1 220 2.4E-40 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 Afer_1239 c6357134544c479516af33a9758ce3b0 230 Gene3D G3DSA:3.20.20.10 1 220 1.8E-50 T 14-10-2018 IPR029066 PLP-binding barrel Afer_1584 1b50fad4355897e3a74cb2de140b8e92 240 SUPERFAMILY SSF51695 11 224 3.14E-30 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Afer_1584 1b50fad4355897e3a74cb2de140b8e92 240 Gene3D G3DSA:3.20.20.190 4 221 1.3E-34 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 Afer_1584 1b50fad4355897e3a74cb2de140b8e92 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 15 67 1.5E-10 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 Afer_0462 837878ce9dd8403a7e94807d6fb783bc 417 SUPERFAMILY SSF51735 1 369 2.84E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0462 837878ce9dd8403a7e94807d6fb783bc 417 Gene3D G3DSA:3.40.50.720 2 294 3.5E-150 T 14-10-2018 Afer_0462 837878ce9dd8403a7e94807d6fb783bc 417 Gene3D G3DSA:3.90.25.10 210 369 3.5E-150 T 14-10-2018 Afer_0462 837878ce9dd8403a7e94807d6fb783bc 417 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 292 3.4E-21 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 Afer_0100 5e2297f9d78365ab05978c44acda7c45 335 Pfam PF07859 alpha/beta hydrolase fold 79 265 9.2E-50 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 Afer_0100 5e2297f9d78365ab05978c44acda7c45 335 SUPERFAMILY SSF53474 45 311 4.74E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_0100 5e2297f9d78365ab05978c44acda7c45 335 Gene3D G3DSA:3.40.50.1820 1 325 2.0E-62 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold Afer_1691 79cc72507093c4a085249b09543f4022 581 Gene3D G3DSA:1.10.8.630 10 116 6.3E-8 T 14-10-2018 Afer_1978 4478e37420b56edf55abd9c7c2ebc95e 470 Pfam PF02233 NAD(P) transhydrogenase beta subunit 14 465 2.8E-174 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Afer_1978 4478e37420b56edf55abd9c7c2ebc95e 470 SUPERFAMILY SSF52467 295 468 1.34E-69 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Afer_1978 4478e37420b56edf55abd9c7c2ebc95e 470 PIRSF PIRSF000204 8 469 1.3E-168 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 Afer_1978 4478e37420b56edf55abd9c7c2ebc95e 470 Gene3D G3DSA:3.40.50.1220 289 470 1.0E-80 T 14-10-2018 Afer_0344 ba9beda65f2f4651ea700af07fcb4367 261 Pfam PF01061 ABC-2 type transporter 36 218 5.0E-8 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Afer_0752 7debd3d50c80b70840abe6537907b24b 343 SUPERFAMILY SSF54197 188 339 3.16E-7 T 14-10-2018 IPR036265 HIT-like superfamily Afer_0752 7debd3d50c80b70840abe6537907b24b 343 Gene3D G3DSA:3.30.428.10 142 339 1.5E-14 T 14-10-2018 IPR036265 HIT-like superfamily Afer_0752 7debd3d50c80b70840abe6537907b24b 343 SUPERFAMILY SSF54197 55 171 1.66E-7 T 14-10-2018 IPR036265 HIT-like superfamily Afer_1994 3f35ff0917001097900b55204f481e6b 286 ProSitePatterns PS00380 Rhodanese signature 1. 36 47 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 Afer_1994 3f35ff0917001097900b55204f481e6b 286 SMART SM00450 2 130 3.7E-13 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1994 3f35ff0917001097900b55204f481e6b 286 SMART SM00450 152 266 2.5E-17 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1994 3f35ff0917001097900b55204f481e6b 286 SUPERFAMILY SSF52821 155 271 7.86E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1994 3f35ff0917001097900b55204f481e6b 286 Gene3D G3DSA:3.40.250.10 4 128 2.4E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1994 3f35ff0917001097900b55204f481e6b 286 Gene3D G3DSA:3.40.250.10 148 269 9.9E-29 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1994 3f35ff0917001097900b55204f481e6b 286 SUPERFAMILY SSF52821 7 121 1.7E-24 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily Afer_1994 3f35ff0917001097900b55204f481e6b 286 Pfam PF00581 Rhodanese-like domain 16 121 1.1E-11 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1994 3f35ff0917001097900b55204f481e6b 286 Pfam PF00581 Rhodanese-like domain 155 262 8.5E-9 T 14-10-2018 IPR001763 Rhodanese-like domain Afer_1667 7ca85cf930c31b5346dc019c4817b0a3 441 Pfam PF09594 Glycosyltransferase family 87 165 392 1.6E-7 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 Afer_0923 fbd6abdec5c265835acb8f00bbe9882e 107 Gene3D G3DSA:3.40.630.30 2 103 5.6E-11 T 14-10-2018 Afer_0923 fbd6abdec5c265835acb8f00bbe9882e 107 Pfam PF00583 Acetyltransferase (GNAT) family 20 94 8.9E-8 T 14-10-2018 IPR000182 GNAT domain Afer_0923 fbd6abdec5c265835acb8f00bbe9882e 107 SUPERFAMILY SSF55729 9 99 1.77E-11 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_0882 411d8276deaff37770dde6272820fb29 386 Pfam PF02754 Cysteine-rich domain 155 241 2.9E-5 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_0882 411d8276deaff37770dde6272820fb29 386 Pfam PF02754 Cysteine-rich domain 287 338 0.035 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_0882 411d8276deaff37770dde6272820fb29 386 Pfam PF13183 4Fe-4S dicluster domain 13 77 1.6E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain Afer_0882 411d8276deaff37770dde6272820fb29 386 SUPERFAMILY SSF46548 8 90 1.19E-18 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0882 411d8276deaff37770dde6272820fb29 386 Gene3D G3DSA:1.10.1060.10 1 99 4.1E-13 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 Afer_0882 411d8276deaff37770dde6272820fb29 386 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 63 74 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site Afer_0147 99a22b7cf82d116ba019cd9b1cc7e359 267 Pfam PF01618 MotA/TolQ/ExbB proton channel family 101 215 3.3E-25 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel Afer_0147 99a22b7cf82d116ba019cd9b1cc7e359 267 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 185 202 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site Afer_1863 e445aeaa7b0c1013ed89f20c089fc091 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_1863 e445aeaa7b0c1013ed89f20c089fc091 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1863 e445aeaa7b0c1013ed89f20c089fc091 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_1894 e445aeaa7b0c1013ed89f20c089fc091 106 Pfam PF01527 Transposase 4 82 6.8E-12 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_1894 e445aeaa7b0c1013ed89f20c089fc091 106 SUPERFAMILY SSF46689 4 97 8.6E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_1894 e445aeaa7b0c1013ed89f20c089fc091 106 Gene3D G3DSA:1.10.10.60 10 92 2.4E-7 T 14-10-2018 Afer_0179 a8803b9b04f18b3319aec4e26a68f108 83 Gene3D G3DSA:3.10.20.30 2 82 1.6E-16 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Afer_0179 a8803b9b04f18b3319aec4e26a68f108 83 Pfam PF02597 ThiS family 6 82 8.6E-14 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Afer_0179 a8803b9b04f18b3319aec4e26a68f108 83 SUPERFAMILY SSF54285 3 80 3.74E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Afer_0704 d916096e470e0133a2ac85027816b28f 198 PIRSF PIRSF000232 10 192 2.5E-37 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like Afer_0704 d916096e470e0133a2ac85027816b28f 198 SUPERFAMILY SSF55469 12 183 5.23E-23 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Afer_0704 d916096e470e0133a2ac85027816b28f 198 Pfam PF00881 Nitroreductase family 20 167 4.6E-11 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 Afer_0704 d916096e470e0133a2ac85027816b28f 198 Gene3D G3DSA:3.40.109.10 15 169 7.5E-23 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 Pfam PF01019 Gamma-glutamyltranspeptidase 29 261 1.3E-46 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 Pfam PF01019 Gamma-glutamyltranspeptidase 313 517 3.3E-26 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 SUPERFAMILY SSF56235 11 524 1.23E-90 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 406 423 7.9E-29 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 129 148 7.9E-29 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 220 236 7.9E-29 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 380 395 7.9E-29 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 324 342 7.9E-29 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 111 129 7.9E-29 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 36 61 7.9E-29 T 14-10-2018 Afer_0697 15dd760a1396c19cf2bcbdfa1c6bf5f3 524 Gene3D G3DSA:3.60.20.40 324 524 2.1E-36 T 14-10-2018 Afer_1587 b7a0d4b8d1f6c5678e6f05923c6ab049 254 Gene3D G3DSA:3.60.160.10 1 230 3.3E-65 T 14-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily Afer_1587 b7a0d4b8d1f6c5678e6f05923c6ab049 254 SUPERFAMILY SSF51219 3 227 1.7E-54 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily Afer_1587 b7a0d4b8d1f6c5678e6f05923c6ab049 254 Pfam PF01987 Mitochondrial biogenesis AIM24 5 212 9.6E-54 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Afer_1587 b7a0d4b8d1f6c5678e6f05923c6ab049 254 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 5 218 4.7E-29 T 14-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 Afer_1646 89029c1ff41241b186d46f20e057e7ae 315 SUPERFAMILY SSF103481 46 146 3.66E-15 T 14-10-2018 Afer_1646 89029c1ff41241b186d46f20e057e7ae 315 Pfam PF00892 EamA-like transporter family 11 142 3.4E-21 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_1646 89029c1ff41241b186d46f20e057e7ae 315 Pfam PF00892 EamA-like transporter family 155 289 5.6E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_1646 89029c1ff41241b186d46f20e057e7ae 315 SUPERFAMILY SSF103481 191 289 6.54E-10 T 14-10-2018 Afer_1455 91174ac834d065d9d9ea0cc19ec80851 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 112 122 4.7E-10 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Afer_1455 91174ac834d065d9d9ea0cc19ec80851 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 208 214 4.7E-10 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Afer_1455 91174ac834d065d9d9ea0cc19ec80851 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 259 271 4.7E-10 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Afer_1455 91174ac834d065d9d9ea0cc19ec80851 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 163 182 4.7E-10 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Afer_1455 91174ac834d065d9d9ea0cc19ec80851 322 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 272 285 4.7E-10 T 14-10-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 Afer_1455 91174ac834d065d9d9ea0cc19ec80851 322 Gene3D G3DSA:3.20.20.100 1 322 5.8E-112 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Afer_1455 91174ac834d065d9d9ea0cc19ec80851 322 SUPERFAMILY SSF51430 1 320 5.24E-92 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily Afer_1455 91174ac834d065d9d9ea0cc19ec80851 322 Pfam PF00248 Aldo/keto reductase family 15 318 2.9E-65 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain Afer_1386 0ed76b9b2985dc13ef5923a0b8bad8c2 182 Pfam PF12079 Protein of unknown function (DUF3558) 12 138 2.5E-13 T 14-10-2018 IPR024520 Protein of unknown function DUF3558 Afer_0705 4dbfa7e0c9f4dae187cadfe0d77c7ff6 201 SMART SM00849 24 180 1.0E-23 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_0705 4dbfa7e0c9f4dae187cadfe0d77c7ff6 201 SUPERFAMILY SSF56281 22 191 6.29E-39 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_0705 4dbfa7e0c9f4dae187cadfe0d77c7ff6 201 Gene3D G3DSA:3.60.15.10 13 198 7.6E-37 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_0705 4dbfa7e0c9f4dae187cadfe0d77c7ff6 201 Pfam PF00753 Metallo-beta-lactamase superfamily 33 180 2.1E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1003 344e4c0e490b0999edd380d530d1e157 444 Pfam PF01098 Cell cycle protein 107 426 2.1E-70 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1240 ff86d033ec5a9f5dd5f6e24eea1de783 209 SUPERFAMILY SSF64438 30 205 7.33E-34 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic Afer_1240 ff86d033ec5a9f5dd5f6e24eea1de783 209 Gene3D G3DSA:3.60.140.10 18 207 2.7E-38 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily Afer_1240 ff86d033ec5a9f5dd5f6e24eea1de783 209 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 33 205 2.5E-31 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase Afer_1975 45b89e02bf9fe4c82dc5c66262f2d8da 763 Gene3D G3DSA:3.40.50.2000 144 382 2.3E-35 T 14-10-2018 Afer_1975 45b89e02bf9fe4c82dc5c66262f2d8da 763 Gene3D G3DSA:3.40.50.2000 196 371 2.3E-35 T 14-10-2018 Afer_1975 45b89e02bf9fe4c82dc5c66262f2d8da 763 Pfam PF00534 Glycosyl transferases group 1 211 355 1.1E-14 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_1975 45b89e02bf9fe4c82dc5c66262f2d8da 763 SUPERFAMILY SSF53756 18 387 4.13E-42 T 14-10-2018 Afer_1116 ff788321ff7aafcc1bf84be01121b029 295 SUPERFAMILY SSF103481 43 141 1.01E-10 T 14-10-2018 Afer_1116 ff788321ff7aafcc1bf84be01121b029 295 Pfam PF00892 EamA-like transporter family 148 282 1.9E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_1116 ff788321ff7aafcc1bf84be01121b029 295 Pfam PF00892 EamA-like transporter family 13 137 1.1E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 Afer_1116 ff788321ff7aafcc1bf84be01121b029 295 SUPERFAMILY SSF103481 195 285 1.23E-6 T 14-10-2018 Afer_0603 5c82282f6af51213197ef21f6b32deae 373 SUPERFAMILY SSF89796 3 354 2.22E-102 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Afer_0603 5c82282f6af51213197ef21f6b32deae 373 Pfam PF02515 CoA-transferase family III 5 334 3.3E-77 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 Afer_0603 5c82282f6af51213197ef21f6b32deae 373 Gene3D G3DSA:3.40.50.10540 4 320 2.1E-114 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily Afer_0603 5c82282f6af51213197ef21f6b32deae 373 Gene3D G3DSA:3.30.1540.10 213 302 2.1E-114 T 14-10-2018 Afer_0337 bdc28a25e5b9f1632f76309cb69dfc72 660 Pfam PF01578 Cytochrome C assembly protein 90 298 3.1E-28 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Afer_0337 bdc28a25e5b9f1632f76309cb69dfc72 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 214 240 3.2E-32 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0337 bdc28a25e5b9f1632f76309cb69dfc72 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 81 107 3.2E-32 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0337 bdc28a25e5b9f1632f76309cb69dfc72 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 298 314 3.2E-32 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0337 bdc28a25e5b9f1632f76309cb69dfc72 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 248 268 3.2E-32 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0337 bdc28a25e5b9f1632f76309cb69dfc72 660 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 163 185 3.2E-32 T 14-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0337 bdc28a25e5b9f1632f76309cb69dfc72 660 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 318 633 1.0E-46 T 14-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal Afer_0223 af8047bdf583ea46c443dabb6ac7c0f7 647 SUPERFAMILY SSF52242 510 640 6.02E-42 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 Afer_0223 af8047bdf583ea46c443dabb6ac7c0f7 647 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 518 638 2.1E-37 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_0223 af8047bdf583ea46c443dabb6ac7c0f7 647 Gene3D G3DSA:3.40.50.280 504 647 4.0E-45 T 14-10-2018 Afer_0223 af8047bdf583ea46c443dabb6ac7c0f7 647 Pfam PF02310 B12 binding domain 519 620 8.3E-20 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 Afer_0223 af8047bdf583ea46c443dabb6ac7c0f7 647 SUPERFAMILY SSF51703 6 490 1.91E-138 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_0223 af8047bdf583ea46c443dabb6ac7c0f7 647 Pfam PF01642 Methylmalonyl-CoA mutase 8 488 1.4E-118 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_0223 af8047bdf583ea46c443dabb6ac7c0f7 647 Gene3D G3DSA:3.20.20.240 3 503 2.4E-151 T 14-10-2018 Afer_0223 af8047bdf583ea46c443dabb6ac7c0f7 647 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 9 494 2.8E-119 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_1520 46581e5e4928e91d7c3ac1b657b920d2 610 Gene3D G3DSA:3.40.190.10 25 326 9.8E-27 T 14-10-2018 Afer_1520 46581e5e4928e91d7c3ac1b657b920d2 610 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 104 519 1.9E-39 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain Afer_1520 46581e5e4928e91d7c3ac1b657b920d2 610 Gene3D G3DSA:3.10.105.10 330 577 2.0E-22 T 14-10-2018 Afer_1520 46581e5e4928e91d7c3ac1b657b920d2 610 SUPERFAMILY SSF53850 56 608 7.42E-54 T 14-10-2018 Afer_0767 95324a58263cc749600513a5d6119cd2 280 Pfam PF04085 rod shape-determining protein MreC 123 270 1.5E-30 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Afer_0767 95324a58263cc749600513a5d6119cd2 280 Gene3D G3DSA:2.40.10.340 121 267 2.0E-30 T 14-10-2018 Afer_0767 95324a58263cc749600513a5d6119cd2 280 Gene3D G3DSA:2.40.10.350 180 258 2.0E-30 T 14-10-2018 Afer_0767 95324a58263cc749600513a5d6119cd2 280 PIRSF PIRSF038471 3 276 7.6E-45 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 Afer_0134 6ff05c5327af47bffae51a1201128054 111 Pfam PF00460 Flagella basal body rod protein 11 34 8.3E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 Afer_0134 6ff05c5327af47bffae51a1201128054 111 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site Afer_0134 6ff05c5327af47bffae51a1201128054 111 PIRSF PIRSF002889 55 110 4.1E-6 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Afer_0134 6ff05c5327af47bffae51a1201128054 111 PIRSF PIRSF002889 1 66 8.2E-12 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 Afer_1748 f162c563ead08d1604400ebf63e37e37 316 Pfam PF01061 ABC-2 type transporter 48 257 2.1E-17 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Afer_1344 5d3aa49ded97ec7de39a268fcc7a7c6d 311 Gene3D G3DSA:3.60.15.10 2 239 4.5E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_1344 5d3aa49ded97ec7de39a268fcc7a7c6d 311 SMART SM00849 38 219 1.4E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1344 5d3aa49ded97ec7de39a268fcc7a7c6d 311 Pfam PF00753 Metallo-beta-lactamase superfamily 37 219 2.7E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase Afer_1344 5d3aa49ded97ec7de39a268fcc7a7c6d 311 SUPERFAMILY SSF56281 16 272 8.82E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like Afer_0488 f23abbf43721d05dccd6143637087e3a 107 SMART SM00834 1 41 1.3E-16 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Afer_0488 f23abbf43721d05dccd6143637087e3a 107 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 1.6E-20 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Afer_0488 f23abbf43721d05dccd6143637087e3a 107 Pfam PF09723 Zinc ribbon domain 1 40 3.6E-16 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain Afer_1291 75b10506a70bf1a946877f7144a9055f 194 Gene3D G3DSA:1.10.10.1930 110 192 2.5E-22 T 14-10-2018 IPR038099 BldD-like, C-terminal domain superfamily Afer_1291 75b10506a70bf1a946877f7144a9055f 194 Pfam PF01381 Helix-turn-helix 16 71 1.6E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Afer_1291 75b10506a70bf1a946877f7144a9055f 194 Gene3D G3DSA:1.10.260.40 4 74 4.4E-26 T 14-10-2018 Afer_1291 75b10506a70bf1a946877f7144a9055f 194 SMART SM00530 15 72 5.0E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 Afer_1291 75b10506a70bf1a946877f7144a9055f 194 SUPERFAMILY SSF47413 10 77 1.52E-8 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 Afer_0779 2f11f01719a8ddd3ba1025f46d1459d8 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 305 5.1E-28 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Afer_1038 9e87c33b15391da2a8606b085b098785 187 Pfam PF01161 Phosphatidylethanolamine-binding protein 46 185 2.1E-27 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein Afer_1038 9e87c33b15391da2a8606b085b098785 187 Gene3D G3DSA:3.90.280.10 23 187 2.7E-43 T 14-10-2018 IPR036610 PEBP-like superfamily Afer_1038 9e87c33b15391da2a8606b085b098785 187 SUPERFAMILY SSF49777 35 187 3.14E-33 T 14-10-2018 IPR036610 PEBP-like superfamily Afer_1038 9e87c33b15391da2a8606b085b098785 187 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 56 184 2.4E-20 T 14-10-2018 IPR005247 YbhB/YbcL Afer_0739 1972a4e48a36ee13ce5a75c4aaa14b7f 326 Gene3D G3DSA:3.90.25.10 183 310 8.5E-84 T 14-10-2018 Afer_0739 1972a4e48a36ee13ce5a75c4aaa14b7f 326 Pfam PF16363 GDP-mannose 4,6 dehydratase 8 308 3.5E-51 T 14-10-2018 IPR016040 NAD(P)-binding domain Afer_0739 1972a4e48a36ee13ce5a75c4aaa14b7f 326 Gene3D G3DSA:3.40.50.720 7 244 8.5E-84 T 14-10-2018 Afer_0739 1972a4e48a36ee13ce5a75c4aaa14b7f 326 SUPERFAMILY SSF51735 6 316 1.62E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_0884 e19db5d789b2ce2e06bc5c95b172f440 106 Gene3D G3DSA:3.30.1340.10 4 88 4.2E-12 T 14-10-2018 IPR035895 HPr-like superfamily Afer_0884 e19db5d789b2ce2e06bc5c95b172f440 106 SUPERFAMILY SSF55594 6 81 1.44E-11 T 14-10-2018 IPR035895 HPr-like superfamily Afer_0884 e19db5d789b2ce2e06bc5c95b172f440 106 Pfam PF00381 PTS HPr component phosphorylation site 6 81 1.1E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like Afer_0884 e19db5d789b2ce2e06bc5c95b172f440 106 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 16 23 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site Afer_1639 62dce98b27debeecc331ec6e0b715b8b 234 Pfam PF03575 Peptidase family S51 22 202 6.1E-16 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 Afer_1639 62dce98b27debeecc331ec6e0b715b8b 234 SUPERFAMILY SSF52317 22 206 3.05E-16 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_1639 62dce98b27debeecc331ec6e0b715b8b 234 Gene3D G3DSA:3.40.50.880 5 226 1.5E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like Afer_0482 fdbf806b349c1e6bbff450c6809a7c95 153 Pfam PF04116 Fatty acid hydroxylase superfamily 7 129 3.5E-11 T 14-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 Afer_0128 050a90e654c51b3aace269f55b59c5ba 86 Gene3D G3DSA:3.30.1360.20 3 77 8.7E-20 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Afer_0128 050a90e654c51b3aace269f55b59c5ba 86 SUPERFAMILY SSF55248 11 58 4.05E-6 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 Afer_1142 e84a0179218812e375f6379a28a7898c 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 314 5.8E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_1142 e84a0179218812e375f6379a28a7898c 315 SUPERFAMILY SSF161098 92 296 2.99E-15 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1142 e84a0179218812e375f6379a28a7898c 315 Gene3D G3DSA:1.10.3720.10 85 308 6.3E-19 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0604 f8821c4b77fdb297dfa40052568baf60 399 SUPERFAMILY SSF52540 11 387 8.93E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0604 f8821c4b77fdb297dfa40052568baf60 399 Pfam PF12696 TraM recognition site of TraD and TraG 259 376 7.5E-16 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site Afer_0604 f8821c4b77fdb297dfa40052568baf60 399 Gene3D G3DSA:3.40.50.300 197 395 3.1E-24 T 14-10-2018 Afer_0126 c0f6a62980ddc46074a2276505ca8309 107 SMART SM00877 8 85 3.8E-29 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Afer_0126 c0f6a62980ddc46074a2276505ca8309 107 SUPERFAMILY SSF143414 9 94 4.84E-27 T 14-10-2018 IPR037233 CcmK-like superfamily Afer_0126 c0f6a62980ddc46074a2276505ca8309 107 Gene3D G3DSA:3.30.70.1710 2 106 1.5E-34 T 14-10-2018 Afer_0126 c0f6a62980ddc46074a2276505ca8309 107 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 26 45 - T 14-10-2018 IPR020808 Bacterial microcompartments protein, conserved site Afer_0126 c0f6a62980ddc46074a2276505ca8309 107 Pfam PF00936 BMC domain 9 84 2.1E-24 T 14-10-2018 IPR000249 Microcompartment protein, bacteria Afer_0126 c0f6a62980ddc46074a2276505ca8309 107 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 9 70 1.0E-19 T 14-10-2018 Afer_1102 fd2fc9fe72fced125f05eecd59b9f1a6 274 SUPERFAMILY SSF103025 25 200 1.32E-30 T 14-10-2018 Afer_1102 fd2fc9fe72fced125f05eecd59b9f1a6 274 Pfam PF01571 Aminomethyltransferase folate-binding domain 25 109 2.2E-8 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain Afer_1102 fd2fc9fe72fced125f05eecd59b9f1a6 274 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 167 201 8.0E-11 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site Afer_1102 fd2fc9fe72fced125f05eecd59b9f1a6 274 Gene3D G3DSA:3.30.1360.120 117 271 3.3E-14 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Afer_1102 fd2fc9fe72fced125f05eecd59b9f1a6 274 Gene3D G3DSA:3.30.1360.120 21 116 2.9E-14 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 Afer_1102 fd2fc9fe72fced125f05eecd59b9f1a6 274 PIRSF PIRSF006487 143 266 1.1 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Afer_1102 fd2fc9fe72fced125f05eecd59b9f1a6 274 PIRSF PIRSF006487 23 119 1.2E-5 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 Afer_0445 6eac27d86c89ed939d02f86c1e8e5051 163 Pfam PF06897 Protein of unknown function (DUF1269) 61 158 1.8E-31 T 14-10-2018 IPR009200 Protein of unknown function DUF1269, membrane associated Afer_0310 b5ab8d1cf4cae48f7729f1ed2d099af3 648 SUPERFAMILY SSF53300 456 618 1.71E-11 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Afer_0310 b5ab8d1cf4cae48f7729f1ed2d099af3 648 SMART SM00327 452 629 1.2E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A Afer_0310 b5ab8d1cf4cae48f7729f1ed2d099af3 648 Gene3D G3DSA:3.40.50.410 452 631 3.4E-13 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily Afer_1737 0d72161a4a8502aa028b133d18f98184 454 SUPERFAMILY SSF56112 94 321 1.94E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Afer_1737 0d72161a4a8502aa028b133d18f98184 454 Pfam PF03109 ABC1 family 118 224 8.4E-28 T 14-10-2018 IPR004147 UbiB domain Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 Gene3D G3DSA:3.30.1390.10 58 128 1.4E-30 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 TIGRFAM TIGR00855 L12: ribosomal protein bL12 4 128 4.6E-45 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 Gene3D G3DSA:1.20.5.710 3 57 4.8E-21 T 14-10-2018 Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 128 24.5 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 6.3E-21 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 SUPERFAMILY SSF54736 57 128 1.22E-24 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 63 128 3.0E-23 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 SUPERFAMILY SSF48300 3 64 1.44E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_0390 1293f9024ec5be22a662d0cc76c459b5 128 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 62 128 2.5E-30 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 Afer_1849 7895bab15ade6b2878e42fbada459824 448 Pfam PF00982 Glycosyltransferase family 20 67 204 2.0E-29 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 Afer_1849 7895bab15ade6b2878e42fbada459824 448 Pfam PF00982 Glycosyltransferase family 20 222 418 2.9E-27 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 Afer_1849 7895bab15ade6b2878e42fbada459824 448 Gene3D G3DSA:3.40.50.2000 231 419 8.2E-94 T 14-10-2018 Afer_1849 7895bab15ade6b2878e42fbada459824 448 SUPERFAMILY SSF53756 7 439 2.95E-70 T 14-10-2018 Afer_1849 7895bab15ade6b2878e42fbada459824 448 Gene3D G3DSA:3.40.50.2000 11 230 8.2E-94 T 14-10-2018 Afer_1444 6305b756c9412d79ee51b2be13acae37 309 Gene3D G3DSA:3.40.50.720 5 301 7.3E-75 T 14-10-2018 Afer_1444 6305b756c9412d79ee51b2be13acae37 309 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 158 186 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 Afer_1444 6305b756c9412d79ee51b2be13acae37 309 Pfam PF00106 short chain dehydrogenase 8 209 8.5E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 205 4.8E-6 T 14-10-2018 Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 159 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 190 2.1E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 SUPERFAMILY SSF51735 6 257 1.99E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 190 2.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 2.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 161 2.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1444 6305b756c9412d79ee51b2be13acae37 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 192 209 2.6E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR Afer_1035 d1c8c4bab09254cc5565c14ba4091c8b 477 Pfam PF00324 Amino acid permease 31 395 3.4E-27 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 Afer_1035 d1c8c4bab09254cc5565c14ba4091c8b 477 Gene3D G3DSA:1.20.1740.10 18 464 2.2E-49 T 14-10-2018 Afer_1035 d1c8c4bab09254cc5565c14ba4091c8b 477 PIRSF PIRSF006060 8 463 6.9E-60 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 Afer_1118 3bb2ae170e3c061994481574a5c620af 507 SUPERFAMILY SSF53383 53 496 9.99E-99 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase Afer_1118 3bb2ae170e3c061994481574a5c620af 507 Gene3D G3DSA:3.40.640.10 101 325 5.0E-53 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 Afer_1118 3bb2ae170e3c061994481574a5c620af 507 Gene3D G3DSA:3.90.1150.10 353 485 4.0E-40 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 Afer_1118 3bb2ae170e3c061994481574a5c620af 507 Pfam PF02347 Glycine cleavage system P-protein 66 316 3.0E-11 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 Afer_1719 d939ca7b20b95fcdc10bd3e4c1155e17 221 Pfam PF01478 Type IV leader peptidase family 72 175 9.8E-9 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 Afer_0590 43554f96c4eaac3e2bab2d4b0180c8f0 206 SUPERFAMILY SSF53448 15 181 3.13E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0590 43554f96c4eaac3e2bab2d4b0180c8f0 206 Gene3D G3DSA:3.90.550.10 3 163 2.0E-26 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0590 43554f96c4eaac3e2bab2d4b0180c8f0 206 Pfam PF01983 Guanylyl transferase CofC like 10 177 2.8E-14 T 14-10-2018 IPR002835 2-phospho-L-lactate guanylyltransferase, CofC GO:0016779 KEGG: 00680+2.7.7.68|MetaCyc: PWY-5198 Afer_0619 4ebbd0e47280c75f04953988a072d5ef 318 Pfam PF14267 Domain of unknown function (DUF4357) 246 294 2.9E-13 T 14-10-2018 IPR025579 Domain of unknown function DUF4357 Afer_0536 f3648d9883b83e2c5ed793d4f00b44eb 165 Gene3D G3DSA:3.40.50.300 3 163 8.4E-33 T 14-10-2018 Afer_0536 f3648d9883b83e2c5ed793d4f00b44eb 165 SUPERFAMILY SSF52540 4 163 2.12E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0536 f3648d9883b83e2c5ed793d4f00b44eb 165 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 162 1.0E-34 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Afer_0536 f3648d9883b83e2c5ed793d4f00b44eb 165 PIRSF PIRSF006135 2 165 1.2E-33 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 Afer_0550 20453e0cc36093b839b92a4d739e1947 109 Pfam PF01527 Transposase 15 90 6.4E-13 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 Afer_0550 20453e0cc36093b839b92a4d739e1947 109 SUPERFAMILY SSF46689 18 106 1.47E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 Afer_0550 20453e0cc36093b839b92a4d739e1947 109 Gene3D G3DSA:1.10.10.60 23 104 4.4E-11 T 14-10-2018 Afer_2004 6bd9835398bcf75ed4e135f3f8cc525a 245 SUPERFAMILY SSF46785 18 92 5.36E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_2004 6bd9835398bcf75ed4e135f3f8cc525a 245 Gene3D G3DSA:1.10.10.10 20 155 4.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_2004 6bd9835398bcf75ed4e135f3f8cc525a 245 SMART SM00345 26 87 1.7E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_2004 6bd9835398bcf75ed4e135f3f8cc525a 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 81 9.9E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 Afer_0149 a5122f93259b69fe92a9c9272a957fc5 163 Pfam PF03748 Flagellar basal body-associated protein FliL 66 163 2.5E-12 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 Afer_2014 eae8da2fe853e3cf142fe2102551a5ae 297 Pfam PF13683 Integrase core domain 188 253 5.4E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 Afer_2014 eae8da2fe853e3cf142fe2102551a5ae 297 SUPERFAMILY SSF53098 100 261 5.18E-35 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily Afer_2014 eae8da2fe853e3cf142fe2102551a5ae 297 Pfam PF13276 HTH-like domain 26 83 2.7E-9 T 14-10-2018 IPR025948 HTH-like domain Afer_2014 eae8da2fe853e3cf142fe2102551a5ae 297 Gene3D G3DSA:3.30.420.10 96 249 1.1E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 Afer_1882 97c7616e817131a49e4800562e57e822 392 SUPERFAMILY SSF55486 86 381 2.34E-28 T 14-10-2018 Afer_1882 97c7616e817131a49e4800562e57e822 392 Pfam PF10103 Zincin-like metallopeptidase 121 377 3.9E-18 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 Afer_0172 be965bdb64164f9e7c11acc5de9ef136 326 SUPERFAMILY SSF161098 95 326 9.81E-11 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0172 be965bdb64164f9e7c11acc5de9ef136 326 Gene3D G3DSA:1.10.3720.10 90 319 5.5E-13 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0172 be965bdb64164f9e7c11acc5de9ef136 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 326 3.8E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_0651 3d83a625800b79197e44ee47c9ef986d 190 PIRSF PIRSF000847 17 190 1.2E-31 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 Afer_0651 3d83a625800b79197e44ee47c9ef986d 190 Pfam PF01066 CDP-alcohol phosphatidyltransferase 22 84 3.8E-9 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Afer_0651 3d83a625800b79197e44ee47c9ef986d 190 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 63 84 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 Afer_0651 3d83a625800b79197e44ee47c9ef986d 190 Gene3D G3DSA:1.20.120.1760 9 188 1.1E-9 T 14-10-2018 Afer_0022 41592d953faf397c30d93713234bba68 462 Gene3D G3DSA:3.20.20.450 225 458 2.5E-29 T 14-10-2018 IPR035919 EAL domain superfamily Afer_0022 41592d953faf397c30d93713234bba68 462 SMART SM00052 225 454 6.8E-11 T 14-10-2018 IPR001633 EAL domain Afer_0022 41592d953faf397c30d93713234bba68 462 SUPERFAMILY SSF141868 234 456 1.57E-29 T 14-10-2018 IPR035919 EAL domain superfamily Afer_0022 41592d953faf397c30d93713234bba68 462 Pfam PF00563 EAL domain 230 449 1.6E-25 T 14-10-2018 IPR001633 EAL domain Afer_1301 5d4b70f0d3cdd81c6989f5a09339bf42 447 SUPERFAMILY SSF63380 231 324 1.76E-10 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel Afer_1301 5d4b70f0d3cdd81c6989f5a09339bf42 447 Pfam PF08022 FAD-binding domain 249 322 8.5E-5 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 Afer_1301 5d4b70f0d3cdd81c6989f5a09339bf42 447 Pfam PF01794 Ferric reductase like transmembrane component 62 184 2.1E-11 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain Afer_1301 5d4b70f0d3cdd81c6989f5a09339bf42 447 SUPERFAMILY SSF52343 313 442 6.42E-15 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Afer_1301 5d4b70f0d3cdd81c6989f5a09339bf42 447 Gene3D G3DSA:2.40.30.10 226 323 9.5E-9 T 14-10-2018 Afer_1301 5d4b70f0d3cdd81c6989f5a09339bf42 447 Gene3D G3DSA:3.40.50.80 324 447 7.8E-10 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain Afer_1729 89f7387cb6c43bc8b08e772a20209793 58 Pfam PF06348 Protein of unknown function (DUF1059) 1 56 5.7E-22 T 14-10-2018 IPR009409 Protein of unknown function DUF1059 Afer_1642 20f0fd7a1c604bb357b2c4f0f816ccd6 402 SUPERFAMILY SSF75304 5 364 4.71E-18 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1642 20f0fd7a1c604bb357b2c4f0f816ccd6 402 Gene3D G3DSA:3.90.1300.10 124 388 3.1E-9 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 Afer_1875 71d9a6dd555bfcf159d1755749d2f64a 131 Pfam PF02627 Carboxymuconolactone decarboxylase family 40 120 5.6E-8 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 Afer_1875 71d9a6dd555bfcf159d1755749d2f64a 131 SUPERFAMILY SSF69118 4 122 2.73E-16 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Afer_1875 71d9a6dd555bfcf159d1755749d2f64a 131 Gene3D G3DSA:1.20.1290.10 1 129 2.4E-21 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 Afer_0439 aa4109321dd9fcb2e5f99421f9cb620e 153 SUPERFAMILY SSF52540 28 137 2.89E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0439 aa4109321dd9fcb2e5f99421f9cb620e 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 16 126 9.3E-26 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Afer_0439 aa4109321dd9fcb2e5f99421f9cb620e 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 15 131 3.8E-22 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 Afer_0439 aa4109321dd9fcb2e5f99421f9cb620e 153 Gene3D G3DSA:3.40.50.300 9 152 1.6E-28 T 14-10-2018 Afer_1145 bdf77d23539234ee3c77c92c33124222 543 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 109 279 3.1E-29 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Afer_1145 bdf77d23539234ee3c77c92c33124222 543 Gene3D G3DSA:1.10.260.150 65 352 2.2E-55 T 14-10-2018 Afer_1145 bdf77d23539234ee3c77c92c33124222 543 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 110 278 1.2E-30 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain Afer_0038 c4c174bba796da49ce2238e730771c54 197 Gene3D G3DSA:1.10.10.10 3 129 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily Afer_0038 c4c174bba796da49ce2238e730771c54 197 SUPERFAMILY SSF46785 14 184 1.58E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily Afer_0038 c4c174bba796da49ce2238e730771c54 197 Pfam PF03551 Transcriptional regulator PadR-like family 18 65 4.7E-11 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal Afer_1744 11cb8084d62f102c97af33086484751d 348 Pfam PF00534 Glycosyl transferases group 1 172 325 6.1E-29 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 Afer_1744 11cb8084d62f102c97af33086484751d 348 Gene3D G3DSA:3.40.50.2000 153 327 2.5E-39 T 14-10-2018 Afer_1744 11cb8084d62f102c97af33086484751d 348 SUPERFAMILY SSF53756 2 341 2.32E-49 T 14-10-2018 Afer_1744 11cb8084d62f102c97af33086484751d 348 Gene3D G3DSA:3.40.50.2000 50 328 2.5E-39 T 14-10-2018 Afer_0537 8da547e4df1bba1df1b2f79ca7186900 242 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 242 31.568 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Afer_0537 8da547e4df1bba1df1b2f79ca7186900 242 Pfam PF02654 Cobalamin-5-phosphate synthase 11 233 7.0E-34 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 Afer_1348 ca4e6c615b3490dc92b4ad6e2d12da1e 450 Pfam PF04459 Protein of unknown function (DUF512) 219 432 2.6E-32 T 14-10-2018 IPR007549 Domain of unknown function DUF512 Afer_1348 ca4e6c615b3490dc92b4ad6e2d12da1e 450 SUPERFAMILY SSF102114 85 260 1.06E-8 T 14-10-2018 Afer_1348 ca4e6c615b3490dc92b4ad6e2d12da1e 450 SUPERFAMILY SSF50156 9 85 2.23E-10 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 Afer_1348 ca4e6c615b3490dc92b4ad6e2d12da1e 450 Gene3D G3DSA:2.30.42.10 7 67 8.3E-11 T 14-10-2018 Afer_1847 b64a0e514e426a7b4dabfe89e506246e 96 Pfam PF02597 ThiS family 9 96 2.9E-17 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 Afer_1847 b64a0e514e426a7b4dabfe89e506246e 96 Gene3D G3DSA:3.10.20.30 5 96 1.1E-28 T 14-10-2018 IPR012675 Beta-grasp domain superfamily Afer_1847 b64a0e514e426a7b4dabfe89e506246e 96 SUPERFAMILY SSF54285 6 96 2.06E-22 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp Afer_0780 372f3a3afdacd657f0d952af91d930e9 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 275 2.3E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Afer_0449 0dcef3d90ceba5e5fd9b7f475b85dda0 305 Gene3D G3DSA:2.130.10.10 75 305 3.1E-22 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 Afer_0449 0dcef3d90ceba5e5fd9b7f475b85dda0 305 SUPERFAMILY SSF50969 79 274 1.65E-20 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like Afer_1167 adbdb506798077bda823fa430585fea4 87 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 4 79 8.2E-13 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family Afer_1167 adbdb506798077bda823fa430585fea4 87 SUPERFAMILY SSF143011 1 79 3.01E-16 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Afer_1167 adbdb506798077bda823fa430585fea4 87 Gene3D G3DSA:3.30.2310.20 2 81 7.4E-18 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily Afer_1710 ae7a56b919cb62742fd6d1d5fd59d927 208 ProSitePatterns PS00194 Thioredoxin family active site. 97 115 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 Afer_1710 ae7a56b919cb62742fd6d1d5fd59d927 208 Pfam PF08534 Redoxin 65 190 2.0E-14 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 Afer_1710 ae7a56b919cb62742fd6d1d5fd59d927 208 Gene3D G3DSA:3.40.30.10 43 205 1.1E-30 T 14-10-2018 Afer_1710 ae7a56b919cb62742fd6d1d5fd59d927 208 SUPERFAMILY SSF52833 28 201 2.25E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_1696 dc027ada95b6ab169308dd111ed70204 106 Gene3D G3DSA:1.10.8.50 3 105 6.3E-39 T 14-10-2018 Afer_1696 dc027ada95b6ab169308dd111ed70204 106 SUPERFAMILY SSF46946 49 104 7.06E-5 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 Afer_0846 81595b4720903749fab6bee30d804c42 251 Gene3D G3DSA:3.40.50.150 7 231 2.5E-39 T 14-10-2018 Afer_0846 81595b4720903749fab6bee30d804c42 251 SUPERFAMILY SSF53335 11 224 4.71E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_0846 81595b4720903749fab6bee30d804c42 251 Pfam PF08241 Methyltransferase domain 59 148 1.8E-19 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 Afer_0464 0fa83ef2e21f028228f42e3e9fdc1d44 631 Pfam PF13641 Glycosyltransferase like family 2 274 496 1.6E-21 T 14-10-2018 Afer_0464 0fa83ef2e21f028228f42e3e9fdc1d44 631 SUPERFAMILY SSF53448 270 538 2.91E-42 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_0464 0fa83ef2e21f028228f42e3e9fdc1d44 631 Gene3D G3DSA:3.90.550.10 266 484 2.7E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases Afer_1740 e045ef0b07c59ed05440945e4c8fb7b2 462 Gene3D G3DSA:3.30.465.10 84 208 1.0E-20 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 Afer_1740 e045ef0b07c59ed05440945e4c8fb7b2 462 SUPERFAMILY SSF56176 38 194 9.35E-31 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 Afer_1740 e045ef0b07c59ed05440945e4c8fb7b2 462 Pfam PF01565 FAD binding domain 47 162 2.2E-19 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 Afer_1600 ab13153568cb15b4d9a5ef5fd4a5e963 519 SUPERFAMILY SSF51445 67 422 3.79E-24 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_1600 ab13153568cb15b4d9a5ef5fd4a5e963 519 Pfam PF14587 O-Glycosyl hydrolase family 30 98 261 6.2E-16 T 14-10-2018 IPR039514 Endo-beta-1,6-galactanase-like GO:0004553 Afer_1600 ab13153568cb15b4d9a5ef5fd4a5e963 519 Pfam PF14587 O-Glycosyl hydrolase family 30 309 362 5.2E-7 T 14-10-2018 IPR039514 Endo-beta-1,6-galactanase-like GO:0004553 Afer_1600 ab13153568cb15b4d9a5ef5fd4a5e963 519 Gene3D G3DSA:3.20.20.80 63 422 9.7E-54 T 14-10-2018 Afer_0836 d9d2842b083718ca0ae2e96d67eef8d9 233 Pfam PF01988 VIT family 17 226 1.1E-57 T 14-10-2018 IPR008217 Ccc1 family Afer_0757 e824eaf2013b2910c0f4f253ca73a199 259 Pfam PF12705 PD-(D/E)XK nuclease superfamily 9 253 8.2E-35 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Afer_0757 e824eaf2013b2910c0f4f253ca73a199 259 SUPERFAMILY SSF52980 36 164 2.84E-5 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Afer_0757 e824eaf2013b2910c0f4f253ca73a199 259 Gene3D G3DSA:3.90.320.10 6 170 4.5E-7 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal Afer_0860 8e13adf4adef3b5a625be0b967231536 342 Pfam PF00296 Luciferase-like monooxygenase 7 319 1.1E-71 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 Afer_0860 8e13adf4adef3b5a625be0b967231536 342 TIGRFAM TIGR03559 F420_Rv3520c: probable F420-dependent oxidoreductase, Rv3520c family 2 322 1.3E-136 T 14-10-2018 IPR019951 F420-dependent oxidoreductase-predicted, Rv3520c Afer_0860 8e13adf4adef3b5a625be0b967231536 342 Gene3D G3DSA:3.20.20.30 2 341 1.4E-74 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Afer_0860 8e13adf4adef3b5a625be0b967231536 342 SUPERFAMILY SSF51679 9 339 6.15E-58 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 Afer_0545 549f9ea0d71713b182b16032a6d4ce4e 156 Pfam PF10722 Putative bacterial sensory transduction regulator 8 132 4.0E-13 T 14-10-2018 IPR019660 Putative sensory transduction regulator YbjN Afer_0049 a44541051928375ff09feadadeb02f46 348 Gene3D G3DSA:1.20.1530.20 2 345 6.0E-10 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily Afer_0334 8c90bd40a1ffb5f9742f7a0aefd5a86a 244 Pfam PF01578 Cytochrome C assembly protein 41 173 1.5E-23 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 Afer_0334 8c90bd40a1ffb5f9742f7a0aefd5a86a 244 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 89 109 2.0E-25 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0334 8c90bd40a1ffb5f9742f7a0aefd5a86a 244 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 145 171 2.0E-25 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0334 8c90bd40a1ffb5f9742f7a0aefd5a86a 244 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 110 130 2.0E-25 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0334 8c90bd40a1ffb5f9742f7a0aefd5a86a 244 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 32 49 2.0E-25 T 14-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 Afer_0835 dbeec73255c1de62b2ae46c43e4bc172 202 SUPERFAMILY SSF52833 5 140 1.31E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_0835 dbeec73255c1de62b2ae46c43e4bc172 202 Gene3D G3DSA:3.40.30.10 4 202 4.3E-45 T 14-10-2018 Afer_0965 24b78405b3f9a270fb06bb77540b60e1 396 Pfam PF02754 Cysteine-rich domain 212 310 5.6E-6 T 14-10-2018 IPR004017 Cysteine-rich domain Afer_1456 9461cee08c08458d235dd626aa824dfe 241 SUPERFAMILY SSF103481 139 237 7.32E-5 T 14-10-2018 Afer_0521 68928213a58ee74a82d82d21b855f476 534 SUPERFAMILY SSF53649 167 380 8.5E-14 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 Afer_0521 68928213a58ee74a82d82d21b855f476 534 Gene3D G3DSA:3.40.720.10 32 210 6.7E-18 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Afer_0521 68928213a58ee74a82d82d21b855f476 534 Gene3D G3DSA:3.40.720.10 274 440 5.0E-35 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 Afer_0521 68928213a58ee74a82d82d21b855f476 534 Pfam PF04185 Phosphoesterase family 43 395 2.3E-66 T 14-10-2018 IPR007312 Phosphoesterase GO:0016788 Afer_1129 9acaf293bbfc575b16f5aeb54ed73e12 270 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 30 243 2.0E-50 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 Afer_1073 897e9165118f043efd8c64e3243e7800 153 Pfam PF12088 Protein of unknown function (DUF3565) 7 62 9.5E-26 T 14-10-2018 IPR021948 Protein of unknown function DUF3565 Afer_0244 411c9e576f5e8a8bb8fcb0362e2a7db0 189 Pfam PF01936 NYN domain 8 147 8.5E-6 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type Afer_1804 b953df8e56a1f0ee23ffadbcbdc89346 367 Pfam PF00953 Glycosyl transferase family 4 80 239 1.7E-35 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 Afer_1804 b953df8e56a1f0ee23ffadbcbdc89346 367 ProSitePatterns PS01348 MraY family signature 2. 155 166 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1760 9e5da14d4ab805af0d586e4c9396810d 294 PIRSF PIRSF003097 1 294 1.2E-71 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 Afer_1760 9e5da14d4ab805af0d586e4c9396810d 294 Gene3D G3DSA:3.30.70.3040 45 153 6.2E-14 T 14-10-2018 Afer_0637 ac29e41d24eefdc90b4e00fc36054af2 70 Pfam PF04296 Protein of unknown function (DUF448) 12 51 1.6E-9 T 14-10-2018 IPR007393 Domain of unknown function DUF448 Afer_0637 ac29e41d24eefdc90b4e00fc36054af2 70 SUPERFAMILY SSF64376 11 47 5.1E-9 T 14-10-2018 IPR035931 YlxR-like superfamily Afer_1068 8db9ff2f88c3bf9d9a314f64d20386e6 333 Gene3D G3DSA:3.30.200.70 27 106 3.3E-13 T 14-10-2018 Afer_1068 8db9ff2f88c3bf9d9a314f64d20386e6 333 Gene3D G3DSA:1.20.1270.170 152 291 3.3E-13 T 14-10-2018 Afer_1068 8db9ff2f88c3bf9d9a314f64d20386e6 333 SUPERFAMILY SSF56112 10 289 9.18E-39 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily Afer_1068 8db9ff2f88c3bf9d9a314f64d20386e6 333 Pfam PF01636 Phosphotransferase enzyme family 44 261 2.1E-24 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase Afer_1068 8db9ff2f88c3bf9d9a314f64d20386e6 333 Gene3D G3DSA:1.10.510.10 56 262 3.3E-13 T 14-10-2018 Afer_1837 423e995bc4b58655dd96db04f581a58f 284 SUPERFAMILY SSF159659 14 262 2.88E-60 T 14-10-2018 Afer_1837 423e995bc4b58655dd96db04f581a58f 284 Pfam PF09754 PAC2 family 22 237 1.4E-31 T 14-10-2018 IPR019151 Proteasome assembly chaperone 2 Afer_1837 423e995bc4b58655dd96db04f581a58f 284 Gene3D G3DSA:3.40.50.10900 17 219 2.0E-71 T 14-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily Afer_1837 423e995bc4b58655dd96db04f581a58f 284 Gene3D G3DSA:1.10.287.100 220 258 2.0E-71 T 14-10-2018 Afer_1837 423e995bc4b58655dd96db04f581a58f 284 PIRSF PIRSF028754 4 284 2.2E-60 T 14-10-2018 IPR008492 Protein of unknown function DUF774 Afer_0230 e34512175ff3142f5e0bc65bc6502620 204 Pfam PF02632 BioY family 46 188 4.0E-37 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Afer_0230 e34512175ff3142f5e0bc65bc6502620 204 Gene3D G3DSA:1.10.1760.20 18 190 9.4E-48 T 14-10-2018 Afer_0230 e34512175ff3142f5e0bc65bc6502620 204 PIRSF PIRSF016661 14 197 1.8E-42 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 Afer_1143 fe69d7f563997fd14b5a0a47b59b3e70 319 Gene3D G3DSA:1.10.3720.10 111 314 1.7E-19 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1143 fe69d7f563997fd14b5a0a47b59b3e70 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 316 5.6E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_1143 fe69d7f563997fd14b5a0a47b59b3e70 319 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 41 92 1.3E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain Afer_1143 fe69d7f563997fd14b5a0a47b59b3e70 319 SUPERFAMILY SSF161098 110 297 4.71E-26 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0997 0ffe10aab8363f42b8c6c81bb6539c48 71 Gene3D G3DSA:3.30.70.20 1 65 3.1E-10 T 14-10-2018 Afer_0997 0ffe10aab8363f42b8c6c81bb6539c48 71 Pfam PF13459 4Fe-4S single cluster domain 7 64 2.2E-7 T 14-10-2018 Afer_0997 0ffe10aab8363f42b8c6c81bb6539c48 71 SUPERFAMILY SSF54862 6 64 3.77E-6 T 14-10-2018 Afer_0784 57011b2eb4d84435198164f1f21d8f80 444 Pfam PF05762 VWA domain containing CoxE-like protein 219 437 9.4E-47 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like Afer_0784 57011b2eb4d84435198164f1f21d8f80 444 PIRSF PIRSF010256 1 444 1.4E-83 T 14-10-2018 IPR011195 Uncharacterised conserved protein UCP010256 Afer_1341 d1964eb4840ab151de8981a4a8c8eaff 127 Pfam PF01934 Protein of unknown function DUF86 16 106 3.4E-20 T 14-10-2018 IPR008201 Protein of unknown function DUF86 Afer_1836 1c511a3f9abcdad1648b245abb0a8342 166 SUPERFAMILY SSF55729 34 151 3.09E-21 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_1836 1c511a3f9abcdad1648b245abb0a8342 166 Gene3D G3DSA:3.40.630.30 6 143 1.9E-23 T 14-10-2018 Afer_1836 1c511a3f9abcdad1648b245abb0a8342 166 Pfam PF00583 Acetyltransferase (GNAT) family 39 136 4.5E-14 T 14-10-2018 IPR000182 GNAT domain Afer_0115 cbe2e092bcc3968667c78a9fb011cb19 125 Gene3D G3DSA:1.20.120.340 3 122 4.9E-19 T 14-10-2018 Afer_0115 cbe2e092bcc3968667c78a9fb011cb19 125 SUPERFAMILY SSF101116 6 119 3.66E-18 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 Afer_0115 cbe2e092bcc3968667c78a9fb011cb19 125 Pfam PF02561 Flagellar protein FliS 7 118 7.6E-22 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 Afer_0382 068eb7ce580d2a274a41fd20b194b49c 166 Gene3D G3DSA:3.40.630.30 5 166 1.0E-46 T 14-10-2018 Afer_0382 068eb7ce580d2a274a41fd20b194b49c 166 Pfam PF13420 Acetyltransferase (GNAT) domain 8 158 4.8E-22 T 14-10-2018 Afer_0382 068eb7ce580d2a274a41fd20b194b49c 166 SUPERFAMILY SSF55729 6 166 2.87E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_0988 e1361ec33545bb927b863a4da52a0159 540 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 8 338 1.2E-54 T 14-10-2018 IPR013381 CRISPR-associated protein Cse1 Afer_0988 e1361ec33545bb927b863a4da52a0159 540 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 8 494 1.4E-105 T 14-10-2018 IPR013381 CRISPR-associated protein Cse1 Afer_0988 e1361ec33545bb927b863a4da52a0159 540 Gene3D G3DSA:1.10.132.100 391 540 3.4E-97 T 14-10-2018 Afer_1793 e062c3593eaa468e944e23c856f7c67e 300 SUPERFAMILY SSF55729 199 251 1.98E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase Afer_1793 e062c3593eaa468e944e23c856f7c67e 300 Gene3D G3DSA:3.90.1140.10 4 169 7.7E-16 T 14-10-2018 Afer_1793 e062c3593eaa468e944e23c856f7c67e 300 SUPERFAMILY SSF55144 5 124 4.19E-14 T 14-10-2018 IPR009097 Cyclic phosphodiesterase Afer_1793 e062c3593eaa468e944e23c856f7c67e 300 Pfam PF13563 2'-5' RNA ligase superfamily 14 130 2.4E-10 T 14-10-2018 Afer_1603 e64ba72da129fb64da079d7b4148eb94 172 Gene3D G3DSA:3.10.129.10 4 172 1.2E-45 T 14-10-2018 Afer_1603 e64ba72da129fb64da079d7b4148eb94 172 Pfam PF01575 MaoC like domain 17 122 2.5E-14 T 14-10-2018 IPR002539 MaoC-like dehydratase domain Afer_1603 e64ba72da129fb64da079d7b4148eb94 172 SUPERFAMILY SSF54637 7 155 2.42E-43 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_1000 07f32c539177a826b6ee2a8f90569f87 288 Gene3D G3DSA:3.10.520.20 7 276 2.3E-34 T 14-10-2018 Afer_1000 07f32c539177a826b6ee2a8f90569f87 288 SUPERFAMILY SSF143631 6 271 1.8E-34 T 14-10-2018 IPR003374 ApbE-like superfamily Afer_1000 07f32c539177a826b6ee2a8f90569f87 288 Pfam PF02424 ApbE family 26 262 6.5E-30 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 Afer_0456 68221fc8454f93f7a09c9b4cc1f9fd44 112 SUPERFAMILY SSF54913 7 96 4.0E-18 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta Afer_0456 68221fc8454f93f7a09c9b4cc1f9fd44 112 Gene3D G3DSA:3.30.70.120 1 97 6.4E-19 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal Afer_0456 68221fc8454f93f7a09c9b4cc1f9fd44 112 Pfam PF02641 Uncharacterized ACR, COG1993 11 88 9.5E-18 T 14-10-2018 IPR003793 Domain of unknown function DUF190 Afer_1287 a08ba2150d29e8af9057eae90918cae2 255 Pfam PF01184 GPR1/FUN34/yaaH family 69 246 2.2E-49 T 14-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 Afer_1612 d8191e3ba4ddd2ade5f460bff9e8e83d 517 SUPERFAMILY SSF56672 29 230 1.31E-13 T 14-10-2018 Afer_1878 e43157dfc1838963dc4b7fa4a9c94e21 273 Pfam PF01061 ABC-2 type transporter 19 227 8.9E-31 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Afer_1878 e43157dfc1838963dc4b7fa4a9c94e21 273 PIRSF PIRSF006648 1 273 7.2E-69 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Afer_1598 b52dfa97d8189d277d0b647eca6b50e1 204 SUPERFAMILY SSF56300 5 182 4.56E-21 T 14-10-2018 Afer_1598 b52dfa97d8189d277d0b647eca6b50e1 204 Gene3D G3DSA:3.60.21.10 3 193 3.7E-46 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Afer_1598 b52dfa97d8189d277d0b647eca6b50e1 204 Pfam PF00149 Calcineurin-like phosphoesterase 5 104 7.3E-5 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Afer_0829 cc93f265fdf67c7ac5e09b950ddc82a3 422 Pfam PF01594 AI-2E family transporter 22 336 9.0E-48 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like Afer_1887 8e5091c02ee857420c081eb3039f8c1b 578 SUPERFAMILY SSF63829 32 325 1.9E-6 T 14-10-2018 Afer_1070 5118c419eebe226b432d1cfec42ee660 309 Pfam PF01112 Asparaginase 20 289 1.1E-63 T 14-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 Afer_1070 5118c419eebe226b432d1cfec42ee660 309 SUPERFAMILY SSF56235 20 296 1.34E-69 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal Afer_1070 5118c419eebe226b432d1cfec42ee660 309 Gene3D G3DSA:3.60.20.30 161 297 2.6E-34 T 14-10-2018 Afer_1484 085df5dcac3e96c03301372b316dcd50 231 SMART SM00858 39 103 0.0027 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 Afer_1043 eff89d76894d7e126128708db82e1d66 254 Pfam PF12730 ABC-2 family transporter protein 10 145 2.4E-11 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 Afer_1578 955a37f2d5ff044752f96390e33f05b1 753 SUPERFAMILY SSF52980 494 691 1.18E-5 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 Afer_1578 955a37f2d5ff044752f96390e33f05b1 753 Pfam PF12705 PD-(D/E)XK nuclease superfamily 493 744 1.4E-28 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Afer_0350 843b89f79c94663b582ee53fd2ea12dc 375 SUPERFAMILY SSF52540 14 306 1.49E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase Afer_0350 843b89f79c94663b582ee53fd2ea12dc 375 Gene3D G3DSA:3.40.50.300 9 365 8.9E-49 T 14-10-2018 Afer_0350 843b89f79c94663b582ee53fd2ea12dc 375 Pfam PF02374 Anion-transporting ATPase 14 283 1.1E-18 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 Afer_1917 8118878d74ce396bec55aa172485eace 110 Pfam PF13490 Putative zinc-finger 27 60 1.4E-10 T 14-10-2018 IPR027383 Putative zinc-finger Afer_1917 8118878d74ce396bec55aa172485eace 110 TIGRFAM TIGR02949 anti_SigH_actin: anti-sigma factor, TIGR02949 family 25 91 9.9E-19 T 14-10-2018 IPR014295 Anti-sigma factor Afer_1917 8118878d74ce396bec55aa172485eace 110 TIGRFAM TIGR03988 antisig_RsrA: mycothiol system anti-sigma-R factor 26 96 5.4E-21 T 14-10-2018 IPR024020 Anti sigma-R factor, mycothiol system,RsrA Afer_0785 518564c4be4a96323894aec06e6df0d2 625 SUPERFAMILY SSF51445 476 621 1.79E-9 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily Afer_0785 518564c4be4a96323894aec06e6df0d2 625 SUPERFAMILY SSF101898 47 268 3.27E-6 T 14-10-2018 Afer_1888 eb8c3835e05930ec35198df487e06a24 593 Pfam PF13289 SIR2-like domain 138 266 7.7E-9 T 14-10-2018 IPR039444 SIR2-like domain Afer_1888 eb8c3835e05930ec35198df487e06a24 593 SUPERFAMILY SSF52467 34 234 7.01E-9 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily Afer_1382 ecad4a56903bac65905ff411b652c0e3 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 244 5.7E-7 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 Afer_1382 ecad4a56903bac65905ff411b652c0e3 259 Gene3D G3DSA:1.10.3720.10 3 255 3.3E-27 T 14-10-2018 IPR035906 MetI-like superfamily Afer_1382 ecad4a56903bac65905ff411b652c0e3 259 SUPERFAMILY SSF161098 4 246 1.5E-29 T 14-10-2018 IPR035906 MetI-like superfamily Afer_0726 126a7c7be06347f8d2fd4c72e108e4d1 526 Pfam PF01642 Methylmalonyl-CoA mutase 8 521 2.5E-219 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_0726 126a7c7be06347f8d2fd4c72e108e4d1 526 Gene3D G3DSA:3.20.20.240 2 526 1.5E-238 T 14-10-2018 Afer_0726 126a7c7be06347f8d2fd4c72e108e4d1 526 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 8 524 3.2E-226 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_0726 126a7c7be06347f8d2fd4c72e108e4d1 526 SUPERFAMILY SSF51703 6 523 1.02E-204 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 Afer_0506 fd05b6db1d39a7bf8605771e5a39cd50 339 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 300 1.3E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 Afer_0463 13be802a79f82229f2b52f15c18e6d6c 504 Gene3D G3DSA:2.40.30.170 398 503 3.1E-8 T 14-10-2018 Afer_0463 13be802a79f82229f2b52f15c18e6d6c 504 Gene3D G3DSA:2.40.50.100 122 213 1.7E-5 T 14-10-2018 Afer_1655 46a78ce094a11a07f162f83acc2783f9 89 Pfam PF00872 Transposase, Mutator family 1 38 1.2E-8 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Afer_1132 f5fb12241bbdf45f38e9313dd664163a 246 Pfam PF02163 Peptidase family M50 151 196 9.3E-8 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 Afer_1689 bb1a2a17c6c6370d02062fb3b7f43fed 374 SUPERFAMILY SSF75011 102 321 2.75E-7 T 14-10-2018 Afer_1680 4702afe742c6e52fab8c2276b1aed7e4 92 Gene3D G3DSA:2.40.50.140 26 91 1.9E-5 T 14-10-2018 Afer_1374 8ae623d826970fe6249021162c56856d 262 SUPERFAMILY SSF52096 4 247 3.98E-60 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily Afer_1374 8ae623d826970fe6249021162c56856d 262 Gene3D G3DSA:3.90.226.10 3 249 3.6E-63 T 14-10-2018 Afer_1374 8ae623d826970fe6249021162c56856d 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 16 247 2.6E-44 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 Afer_1374 8ae623d826970fe6249021162c56856d 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 Afer_1690 fd4e1ea433e5627dea986d12857fc51c 586 Gene3D G3DSA:3.40.30.10 411 577 2.6E-15 T 14-10-2018 Afer_1690 fd4e1ea433e5627dea986d12857fc51c 586 SUPERFAMILY SSF52833 417 568 2.77E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily Afer_1496 489175422a6cdaf81e2b4e6cf59ae9ba 98 Pfam PF10611 Protein of unknown function (DUF2469) 1 96 6.3E-45 T 14-10-2018 IPR019592 Protein of unknown function DUF2469 Afer_1536 e11612d898069bad37a5f4bb6ed020b3 342 Gene3D G3DSA:3.40.718.10 3 336 6.2E-111 T 14-10-2018 Afer_1536 e11612d898069bad37a5f4bb6ed020b3 342 SMART SM01329 4 333 2.0E-135 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Afer_1536 e11612d898069bad37a5f4bb6ed020b3 342 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 317 2.9E-79 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 Afer_1536 e11612d898069bad37a5f4bb6ed020b3 342 SUPERFAMILY SSF53659 3 329 1.27E-98 T 14-10-2018 Afer_2033 412439a6680ec8fd82dd77f4a6a8d18d 218 Gene3D G3DSA:3.40.50.150 10 202 2.7E-33 T 14-10-2018 Afer_2033 412439a6680ec8fd82dd77f4a6a8d18d 218 SUPERFAMILY SSF53335 27 198 2.5E-14 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase Afer_2033 412439a6680ec8fd82dd77f4a6a8d18d 218 Pfam PF02527 rRNA small subunit methyltransferase G 32 142 6.4E-17 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 Afer_2005 4a4ffed3c64589d2f018707f745f56d1 220 Gene3D G3DSA:3.30.450.20 6 152 2.0E-11 T 14-10-2018 Afer_0144 a43eb6248600821d282cd229f5d92840 159 Pfam PF03963 Flagellar hook capping protein - N-terminal region 11 74 8.2E-17 T 14-10-2018 IPR005648 Flagellar hook capping protein Afer_0093 523bd53b4f9010e0c750bca84e3919ad 182 Pfam PF01169 Uncharacterized protein family UPF0016 100 172 1.2E-10 T 14-10-2018 IPR001727 Gdt1 family Afer_0093 523bd53b4f9010e0c750bca84e3919ad 182 Pfam PF01169 Uncharacterized protein family UPF0016 3 73 2.9E-12 T 14-10-2018 IPR001727 Gdt1 family Afer_0258 bf221027449276abebf6da142f73ca54 240 TIGRFAM TIGR03843 TIGR03843: conserved hypothetical protein 20 240 1.8E-67 T 14-10-2018 IPR022292 Conserved hypothetical protein CHP03843 Afer_0258 bf221027449276abebf6da142f73ca54 240 Pfam PF00454 Phosphatidylinositol 3- and 4-kinase 94 171 3.4E-6 T 14-10-2018 IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain Afer_1314 be7fe410b033797e86baf958ab8a4079 313 Pfam PF13391 HNH endonuclease 229 277 9.0E-11 T 14-10-2018 IPR003615 HNH nuclease Afer_0855 4bd43de54c2be0174b1c4f0b0198ed90 541 Pfam PF03734 L,D-transpeptidase catalytic domain 422 538 3.1E-13 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 Afer_0855 4bd43de54c2be0174b1c4f0b0198ed90 541 SUPERFAMILY SSF141523 429 538 2.35E-19 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Afer_0855 4bd43de54c2be0174b1c4f0b0198ed90 541 Gene3D G3DSA:2.40.440.10 424 541 8.8E-20 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like Afer_0315 0e047bf0a5b6cd0a060482c19728060c 200 Pfam PF10708 Protein of unknown function (DUF2510) 14 50 1.4E-7 T 14-10-2018 IPR018929 Domain of unknown function DUF2510 Afer_1871 c3a581417cf0858c2c3f16f9e916ee66 949 Pfam PF03699 Uncharacterised protein family (UPF0182) 23 811 4.1E-235 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 Afer_0343 2c6d7301490dd73f5545738a2479dc9c 357 SUPERFAMILY SSF55874 242 343 7.2E-10 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_0343 2c6d7301490dd73f5545738a2479dc9c 357 Gene3D G3DSA:3.30.565.10 226 345 1.3E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily Afer_1512 5f0452dfa1e342eadba90ed4e2b11bc9 173 Pfam PF02620 Uncharacterized ACR, COG1399 59 162 2.4E-22 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD Afer_0454 0fd196047a4e09e9de4b7c2d7818b790 258 SUPERFAMILY SSF54637 116 254 3.73E-7 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_0454 0fd196047a4e09e9de4b7c2d7818b790 258 Pfam PF13622 Thioesterase-like superfamily 23 254 1.3E-32 T 14-10-2018 Afer_0454 0fd196047a4e09e9de4b7c2d7818b790 258 Gene3D G3DSA:3.10.129.90 19 257 6.2E-15 T 14-10-2018 Afer_0454 0fd196047a4e09e9de4b7c2d7818b790 258 SUPERFAMILY SSF54637 8 109 2.48E-8 T 14-10-2018 IPR029069 HotDog domain superfamily Afer_0378 0a5e0e1cd13505094145fafa8c308553 938 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 609 903 4.1E-69 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal Afer_1822 318dd831f5c0ae9b32f65c0132773834 142 Pfam PF12270 Cytochrome c oxidase subunit IV 2 123 1.1E-23 T 14-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 Afer_1067 b69fac86ed2e536c56aaccbf37bbc3f5 293 Pfam PF12705 PD-(D/E)XK nuclease superfamily 82 284 3.1E-7 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type Afer_1637 d8e6d7c1d1a174fc6ae569f8746ca08f 148 Pfam PF08044 Domain of unknown function (DUF1707) 7 59 2.3E-18 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 Afer_0891 19314e3e2b3c8c6f029352159b5df0ef 392 Pfam PF01757 Acyltransferase family 8 330 8.2E-20 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 Afer_1489 2a47fa75a5fa459104076f679870788c 155 Pfam PF06271 RDD family 10 141 2.1E-23 T 14-10-2018 IPR010432 RDD Afer_0963 7257c225ed77a203be073024dede8880 127 SUPERFAMILY SSF75169 9 127 2.19E-17 T 14-10-2018 IPR027396 DsrEFH-like Afer_0963 7257c225ed77a203be073024dede8880 127 Gene3D G3DSA:3.40.1260.10 2 127 1.2E-33 T 14-10-2018 IPR027396 DsrEFH-like Afer_0963 7257c225ed77a203be073024dede8880 127 Pfam PF02635 DsrE/DsrF-like family 9 127 1.2E-13 T 14-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein Afer_0986 ac6410594ba29abed684f8c2eac2fcee 386 Pfam PF09344 CT1975-like protein 9 363 1.1E-109 T 14-10-2018 IPR010148 CRISPR-associated protein, CT1975 Afer_0986 ac6410594ba29abed684f8c2eac2fcee 386 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 9 340 2.6E-91 T 14-10-2018 IPR010148 CRISPR-associated protein, CT1975 Afer_1997 32c7edb1b69fbff1f2905843386b071b 350 PIRSF PIRSF035875 5 296 1.1E-26 T 14-10-2018 IPR017039 Virulence factor BrkB Afer_1997 32c7edb1b69fbff1f2905843386b071b 350 Pfam PF03631 Virulence factor BrkB 33 279 1.8E-26 T 14-10-2018 IPR017039 Virulence factor BrkB Afer_1993 d28cfb3f8c60257f0475031e21b526e1 479 Pfam PF02646 RmuC family 157 444 7.9E-71 T 14-10-2018 IPR003798 DNA recombination RmuC Afer_1897 7627ec207ed720fce26f2e7f47f84e98 504 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 20 446 1.8E-35 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 Afer_1897 7627ec207ed720fce26f2e7f47f84e98 504 PIRSF PIRSF002744 2 472 1.0E-93 T 14-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 Afer_1897 7627ec207ed720fce26f2e7f47f84e98 504 Gene3D G3DSA:1.10.4160.10 12 463 2.6E-28 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily Afer_0083 8b90c33371ec9d9d4a08024ffcbc421a 175 Pfam PF03640 Secreted repeat of unknown function 105 150 2.3E-15 T 14-10-2018 IPR005297 Lipoprotein repeat Afer_0083 8b90c33371ec9d9d4a08024ffcbc421a 175 Pfam PF03640 Secreted repeat of unknown function 48 88 3.0E-8 T 14-10-2018 IPR005297 Lipoprotein repeat Afer_0218 146da4aa8f3d2ad0a098b5f432dec68a 162 Gene3D G3DSA:3.40.1550.10 29 145 7.8E-6 T 14-10-2018 IPR028976 CheC-like superfamily Afer_0916 20e6c3d10dcb0e13ad76d1111adc97b7 117 Pfam PF02416 mttA/Hcf106 family 5 31 5.0E-5 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 Afer_0828 c0ed9742f9936e54cf7a2ef60f5a2510 339 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 12 299 2.1E-33 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Afer_0828 c0ed9742f9936e54cf7a2ef60f5a2510 339 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 5 304 4.5E-23 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Afer_1246 d3bcf08754341a621928c259dcedfdf2 379 Pfam PF01098 Cell cycle protein 38 370 1.3E-69 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_1246 d3bcf08754341a621928c259dcedfdf2 379 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 Afer_0050 df0c8d5acdb9a7eeedeeca14a5cb114a 221 Pfam PF03640 Secreted repeat of unknown function 155 194 2.3E-10 T 14-10-2018 IPR005297 Lipoprotein repeat Afer_0152 7055d725ca7d63f8b3f84759783a2bfc 105 Pfam PF04347 Flagellar biosynthesis protein, FliO 28 87 2.3E-10 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 Afer_1395 5837e84af321c8a58cd590a247daaedb 252 Pfam PF14335 Domain of unknown function (DUF4391) 10 243 1.2E-77 T 14-10-2018 IPR025503 Protein of unknown function DUF4391 Afer_0069 6698182b9e7a147001925da681d3a777 489 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 84 234 6.4E-7 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like Afer_1384 5569d634f991be773053ba7ca42f222a 546 Pfam PF00149 Calcineurin-like phosphoesterase 48 409 1.7E-6 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 Afer_1384 5569d634f991be773053ba7ca42f222a 546 SUPERFAMILY SSF56300 48 444 9.95E-24 T 14-10-2018 Afer_1384 5569d634f991be773053ba7ca42f222a 546 Gene3D G3DSA:3.60.21.10 198 470 6.7E-10 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like Afer_0614 1d19f9ca745ae39af035d585d4de07dd 256 Pfam PF09995 Uncharacterized protein conserved in bacteria (DUF2236) 12 235 6.5E-33 T 14-10-2018 IPR018713 Domain of unknown function DUF2236 Afer_0192 990e40da2d1c0b14964078ab5044d102 244 Pfam PF01061 ABC-2 type transporter 13 208 2.1E-11 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 Afer_0192 990e40da2d1c0b14964078ab5044d102 244 PIRSF PIRSF006648 3 243 4.3E-20 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 Afer_0276 1e3fefa6c8623bfb9bf39438a72abe44 227 Pfam PF07758 Protein of unknown function (DUF1614) 54 224 1.5E-52 T 14-10-2018 IPR011672 Protein of unknown function DUF1614 Afer_1427 1f7b8d6e4749ceb120d1393d64ff8fc8 562 TIGRFAM TIGR01766 tspaseT_teng_C: transposase, IS605 OrfB family 352 438 1.1E-7 T 14-10-2018 IPR010095 Transposase IS605, OrfB, C-terminal Afer_0809 19c2308ce4b2129e9984f7141d100b73 220 Pfam PF14016 Protein of unknown function (DUF4232) 71 203 1.0E-30 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 Afer_0538 6f10baf378a8700ab29077b9268de083 299 Pfam PF03186 CobD/Cbib protein 9 272 4.8E-80 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Afer_0538 6f10baf378a8700ab29077b9268de083 299 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 298 72.011 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 Afer_1562 78fa2fea9d4f72ade7cedc9cba149cb5 152 Pfam PF04417 Protein of unknown function (DUF501) 101 133 3.9E-5 T 14-10-2018 IPR007511 Protein of unknown function DUF501 Afer_1562 78fa2fea9d4f72ade7cedc9cba149cb5 152 Pfam PF04417 Protein of unknown function (DUF501) 24 91 4.3E-8 T 14-10-2018 IPR007511 Protein of unknown function DUF501 Afer_0561 a3b205bc30cfa8da1c4b5d55f2a27152 393 Pfam PF01458 Uncharacterized protein family (UPF0051) 171 368 4.2E-45 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 Afer_0561 a3b205bc30cfa8da1c4b5d55f2a27152 393 SUPERFAMILY SSF101960 30 376 6.67E-52 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily Afer_0570 679f879e1af428759cf8478bf12f84ae 603 SUPERFAMILY SSF110296 55 599 1.83E-9 T 14-10-2018 Afer_0541 6b72b8c9cdea54e4a18244471fff8998 391 Pfam PF13464 Domain of unknown function (DUF4115) 316 378 1.9E-9 T 14-10-2018 IPR025194 Domain of unknown function DUF4115 Afer_0284 629176f33be04bca73f21e43612fcf8f 744 Pfam PF13515 Fusaric acid resistance protein-like 403 527 1.3E-16 T 14-10-2018 Afer_0034 6c3b4d75a20baf8bc73fb426f04a583e 117 Pfam PF01934 Protein of unknown function DUF86 28 101 5.6E-14 T 14-10-2018 IPR008201 Protein of unknown function DUF86 Afer_1654 c286527ed3e2a48a75763f924e68e654 340 Pfam PF00872 Transposase, Mutator family 290 340 1.2E-10 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Afer_1654 c286527ed3e2a48a75763f924e68e654 340 Pfam PF00872 Transposase, Mutator family 159 201 3.8E-7 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 Afer_1979 86dd18dd10026111bcc3d4bafe2ed2f3 97 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 9 91 1.0E-30 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 Afer_0583 f58c52b80c1a592a0ee68b8cd06a4343 598 Pfam PF13280 WYL domain 134 205 3.3E-9 T 14-10-2018 IPR026881 WYL domain Afer_0583 f58c52b80c1a592a0ee68b8cd06a4343 598 Pfam PF13280 WYL domain 437 505 1.7E-10 T 14-10-2018 IPR026881 WYL domain Afer_0902 d3d6c4c9cf18753671f6e7c11c92a121 99 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 5 98 1.3E-6 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III Afer_1866 2ab03c41a2b3e41a2dbcfe01747b38fa 202 Pfam PF04555 Restriction endonuclease XhoI 15 194 2.2E-73 T 14-10-2018 IPR007636 Restriction endonuclease, type II, XhoI GO:0003677|GO:0009036|GO:0009307 Afer_0794 bfb5cdd40f67db13e05c5295eac6bfe2 123 Pfam PF11255 Protein of unknown function (DUF3054) 8 107 1.0E-25 T 14-10-2018 IPR021414 Protein of unknown function DUF3054 Afer_0480 98648ef7c195ff10e736e9495529b2b4 108 TIGRFAM TIGR03462 CarR_dom_SF: lycopene cyclase domain 4 92 3.2E-21 T 14-10-2018 IPR017825 Lycopene cyclase domain GO:0016872 KEGG: 00906+2.5.1.32+5.5.1.19|MetaCyc: PWY-5943|MetaCyc: PWY-5947|MetaCyc: PWY-6279|MetaCyc: PWY-7591|MetaCyc: PWY-7938|MetaCyc: PWY-7939|MetaCyc: PWY-7947 Afer_1033 7dca98fd8675798da92103253e4c62f2 588 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 7 348 3.4E-126 T 14-10-2018 IPR010839 Acyclic terpene utilisation