locus-tag class description FE249_00025 PF02272 DHHA1 domain FE249_00025 PF01411 tRNA synthetases class II (A) FE249_00025 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FE249_00030 PF00171 Aldehyde dehydrogenase family FE249_00030 PF01619 Proline dehydrogenase FE249_00030 PF14850 DNA-binding domain of Proline dehydrogenase FE249_00030 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FE249_00035 PF02719 Polysaccharide biosynthesis protein FE249_00040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FE249_00045 PF00561 alpha/beta hydrolase fold FE249_00065 PF00920 Dehydratase family FE249_00075 PF06779 Uncharacterised MFS-type transporter YbfB FE249_00080 PF00005 ABC transporter FE249_00085 PF00005 ABC transporter FE249_00085 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE249_00090 PF02653 Branched-chain amino acid transport system / permease component FE249_00095 PF02653 Branched-chain amino acid transport system / permease component FE249_00100 PF13458 Periplasmic binding protein FE249_00105 PF02390 Putative methyltransferase FE249_00110 PF02773 S-adenosylmethionine synthetase, C-terminal domain FE249_00110 PF02772 S-adenosylmethionine synthetase, central domain FE249_00110 PF00438 S-adenosylmethionine synthetase, N-terminal domain FE249_00115 PF05173 Dihydrodipicolinate reductase, C-terminus FE249_00115 PF01113 Dihydrodipicolinate reductase, N-terminus FE249_00130 PF03167 Uracil DNA glycosylase superfamily FE249_00145 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE249_00145 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE249_00150 PF13407 Periplasmic binding protein domain FE249_00155 PF02653 Branched-chain amino acid transport system / permease component FE249_00160 PF00005 ABC transporter FE249_00170 PF07729 FCD domain FE249_00170 PF00392 Bacterial regulatory proteins, gntR family FE249_00175 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain FE249_00175 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain FE249_00180 PF17042 Nucleotide-binding C-terminal domain FE249_00180 PF07005 Sugar-binding N-terminal domain FE249_00185 PF16896 Phosphogluconate dehydrogenase (decarboxylating) C-term FE249_00185 PF10727 Rossmann-like domain FE249_00195 PF00005 ABC transporter FE249_00205 PF03358 NADPH-dependent FMN reductase FE249_00220 PF00924 Mechanosensitive ion channel FE249_00225 PF02979 Nitrile hydratase, alpha chain FE249_00240 PF07690 Major Facilitator Superfamily FE249_00245 PF01557 Fumarylacetoacetate (FAA) hydrolase family FE249_00270 PF07859 alpha/beta hydrolase fold FE249_00275 PF00106 short chain dehydrogenase FE249_00280 PF00743 Flavin-binding monooxygenase-like FE249_00290 PF00463 Isocitrate lyase family FE249_00300 PF04542 Sigma-70 region 2 FE249_00300 PF04545 Sigma-70, region 4 FE249_00310 PF00510 Cytochrome c oxidase subunit III FE249_00315 PF00115 Cytochrome C and Quinol oxidase polypeptide I FE249_00320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FE249_00320 PF06481 COX Aromatic Rich Motif FE249_00330 PF13593 SBF-like CPA transporter family (DUF4137) FE249_00335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_00335 PF03466 LysR substrate binding domain FE249_00340 PF08241 Methyltransferase domain FE249_00350 PF00563 EAL domain FE249_00350 PF00990 Diguanylate cyclase, GGDEF domain FE249_00350 PF03707 Bacterial signalling protein N terminal repeat FE249_00350 PF13188 PAS domain FE249_00355 PF00571 CBS domain FE249_00355 PF00478 IMP dehydrogenase / GMP reductase domain FE249_00360 PF00361 Proton-conducting membrane transporter FE249_00365 PF00361 Proton-conducting membrane transporter FE249_00370 PF00361 Proton-conducting membrane transporter FE249_00370 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FE249_00375 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FE249_00380 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FE249_00385 PF12838 4Fe-4S dicluster domain FE249_00390 PF00146 NADH dehydrogenase FE249_00395 PF00384 Molybdopterin oxidoreductase FE249_00395 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FE249_00395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE249_00400 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FE249_00400 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FE249_00400 PF10531 SLBB domain FE249_00410 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FE249_00410 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FE249_00415 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE249_00420 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FE249_00425 PF00689 Cation transporting ATPase, C-terminus FE249_00425 PF00690 Cation transporter/ATPase, N-terminus FE249_00430 PF01699 Sodium/calcium exchanger protein FE249_00435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE249_00435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE249_00440 PF00941 FAD binding domain in molybdopterin dehydrogenase FE249_00440 PF03450 CO dehydrogenase flavoprotein C-terminal domain FE249_00445 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_00445 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_00450 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_00450 PF01799 [2Fe-2S] binding domain FE249_00455 PF02583 Metal-sensitive transcriptional repressor FE249_00460 PF01545 Cation efflux family FE249_00465 PF09278 MerR, DNA binding FE249_00465 PF00376 MerR family regulatory protein FE249_00475 PF01545 Cation efflux family FE249_00480 PF07731 Multicopper oxidase FE249_00480 PF00394 Multicopper oxidase FE249_00480 PF07732 Multicopper oxidase FE249_00485 PF01757 Acyltransferase family FE249_00495 PF00528 Binding-protein-dependent transport system inner membrane component FE249_00500 PF00005 ABC transporter FE249_00505 PF02653 Branched-chain amino acid transport system / permease component FE249_00510 PF02653 Branched-chain amino acid transport system / permease component FE249_00515 PF00005 ABC transporter FE249_00525 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FE249_00540 PF01965 DJ-1/PfpI family FE249_00540 PF12833 Helix-turn-helix domain FE249_00555 PF01979 Amidohydrolase family FE249_00565 PF01014 Uricase FE249_00565 PF09349 OHCU decarboxylase FE249_00575 PF00576 HIUase/Transthyretin family FE249_00585 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_00585 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_00590 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_00590 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_00590 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_00590 PF01799 [2Fe-2S] binding domain FE249_00595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_00595 PF03466 LysR substrate binding domain FE249_00600 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE249_00600 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE249_00600 PF00205 Thiamine pyrophosphate enzyme, central domain FE249_00605 PF01261 Xylose isomerase-like TIM barrel FE249_00610 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE249_00610 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE249_00615 PF13660 Domain of unknown function (DUF4147) FE249_00615 PF05161 MOFRL family FE249_00620 PF07687 Peptidase dimerisation domain FE249_00620 PF01546 Peptidase family M20/M25/M40 FE249_00625 PF07687 Peptidase dimerisation domain FE249_00625 PF01546 Peptidase family M20/M25/M40 FE249_00635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_00635 PF03466 LysR substrate binding domain FE249_00640 PF00665 Integrase core domain FE249_00645 PF01695 IstB-like ATP binding protein FE249_00675 PF00872 Transposase, Mutator family FE249_00835 PF02195 ParB-like nuclease domain FE249_00940 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FE249_00945 PF01467 Cytidylyltransferase-like FE249_00950 PF00521 DNA gyrase/topoisomerase IV, subunit A FE249_00950 PF03989 DNA gyrase C-terminal domain, beta-propeller FE249_00960 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FE249_00960 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FE249_00965 PF02699 Preprotein translocase subunit FE249_00980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE249_00985 PF00528 Binding-protein-dependent transport system inner membrane component FE249_00990 PF00528 Binding-protein-dependent transport system inner membrane component FE249_00990 PF12911 N-terminal TM domain of oligopeptide transport permease C FE249_00995 PF00005 ABC transporter FE249_00995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE249_01000 PF01618 MotA/TolQ/ExbB proton channel family FE249_01005 PF02472 Biopolymer transport protein ExbD/TolR FE249_01010 PF02899 Phage integrase, N-terminal SAM-like domain FE249_01010 PF00589 Phage integrase family FE249_01020 PF01189 16S rRNA methyltransferase RsmB/F FE249_01020 PF01029 NusB family FE249_01025 PF00478 IMP dehydrogenase / GMP reductase domain FE249_01025 PF00571 CBS domain FE249_01035 PF00501 AMP-binding enzyme FE249_01035 PF13193 AMP-binding enzyme C-terminal domain FE249_01040 PF06736 Protein of unknown function (DUF1211) FE249_01050 PF00348 Polyprenyl synthetase FE249_01055 PF02609 Exonuclease VII small subunit FE249_01060 PF00850 Histone deacetylase domain FE249_01070 PF00480 ROK family FE249_01075 PF00459 Inositol monophosphatase family FE249_01080 PF00883 Cytosol aminopeptidase family, catalytic domain FE249_01080 PF02789 Cytosol aminopeptidase family, N-terminal domain FE249_01090 PF03350 Uncharacterized protein family, UPF0114 FE249_01100 PF03989 DNA gyrase C-terminal domain, beta-propeller FE249_01100 PF00521 DNA gyrase/topoisomerase IV, subunit A FE249_01105 PF02565 Recombination protein O C terminal FE249_01105 PF11967 Recombination protein O N terminal FE249_01115 PF07687 Peptidase dimerisation domain FE249_01115 PF01546 Peptidase family M20/M25/M40 FE249_01130 PF16363 GDP-mannose 4,6 dehydratase FE249_01135 PF00483 Nucleotidyl transferase FE249_01140 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FE249_01145 PF04321 RmlD substrate binding domain FE249_01160 PF00361 Proton-conducting membrane transporter FE249_01165 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE249_01170 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FE249_01175 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FE249_01175 PF00361 Proton-conducting membrane transporter FE249_01205 PF00672 HAMP domain FE249_01205 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_01220 PF04989 Cephalosporin hydroxylase FE249_01225 PF08338 Domain of unknown function (DUF1731) FE249_01225 PF01370 NAD dependent epimerase/dehydratase family FE249_01235 PF08421 Putative zinc binding domain FE249_01235 PF08484 C-methyltransferase C-terminal domain FE249_01240 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FE249_01245 PF16363 GDP-mannose 4,6 dehydratase FE249_01250 PF00483 Nucleotidyl transferase FE249_01265 PF00664 ABC transporter transmembrane region FE249_01265 PF00005 ABC transporter FE249_01270 PF07690 Major Facilitator Superfamily FE249_01285 PF01575 MaoC like domain FE249_01290 PF06574 FAD synthetase FE249_01290 PF01687 Riboflavin kinase FE249_01295 PF02463 RecF/RecN/SMC N terminal domain FE249_01300 PF09856 Predicted transcriptional regulator (DUF2083) FE249_01300 PF01381 Helix-turn-helix FE249_01300 PF06114 IrrE N-terminal-like domain FE249_01320 PF00072 Response regulator receiver domain FE249_01320 PF13426 PAS domain FE249_01320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_01325 PF00486 Transcriptional regulatory protein, C terminal FE249_01325 PF00072 Response regulator receiver domain FE249_01330 PF00027 Cyclic nucleotide-binding domain FE249_01330 PF13545 Crp-like helix-turn-helix domain FE249_01365 PF01270 Glycosyl hydrolases family 8 FE249_01370 PF03170 Bacterial cellulose synthase subunit FE249_01370 PF03552 Cellulose synthase FE249_01370 PF07238 PilZ domain FE249_01370 PF00535 Glycosyl transferase family 2 FE249_01375 PF07691 PA14 domain FE249_01375 PF01915 Glycosyl hydrolase family 3 C-terminal domain FE249_01375 PF00933 Glycosyl hydrolase family 3 N terminal domain FE249_01375 PF14310 Fibronectin type III-like domain FE249_01380 PF00990 Diguanylate cyclase, GGDEF domain FE249_01385 PF00156 Phosphoribosyl transferase domain FE249_01390 PF00180 Isocitrate/isopropylmalate dehydrogenase FE249_01395 PF00296 Luciferase-like monooxygenase FE249_01400 PF02321 Outer membrane efflux protein FE249_01405 PF07690 Major Facilitator Superfamily FE249_01410 PF00529 HlyD membrane-fusion protein of T1SS FE249_01410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE249_01425 PF00005 ABC transporter FE249_01425 PF06472 ABC transporter transmembrane region 2 FE249_01445 PF02569 Pantoate-beta-alanine ligase FE249_01450 PF00005 ABC transporter FE249_01450 PF00664 ABC transporter transmembrane region FE249_01455 PF00005 ABC transporter FE249_01455 PF00664 ABC transporter transmembrane region FE249_01460 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FE249_01465 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FE249_01465 PF02542 YgbB family FE249_01480 PF01050 Mannose-6-phosphate isomerase FE249_01480 PF00483 Nucleotidyl transferase FE249_01490 PF00120 Glutamine synthetase, catalytic domain FE249_01495 PF00202 Aminotransferase class-III FE249_01510 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FE249_01510 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FE249_01515 PF00005 ABC transporter FE249_01515 PF08402 TOBE domain FE249_01520 PF00528 Binding-protein-dependent transport system inner membrane component FE249_01525 PF00528 Binding-protein-dependent transport system inner membrane component FE249_01530 PF13416 Bacterial extracellular solute-binding protein FE249_01535 PF00120 Glutamine synthetase, catalytic domain FE249_01540 PF01266 FAD dependent oxidoreductase FE249_01550 PF00561 alpha/beta hydrolase fold FE249_01555 PF00682 HMGL-like FE249_01555 PF08502 LeuA allosteric (dimerisation) domain FE249_01560 PF05958 tRNA (Uracil-5-)-methyltransferase FE249_01565 PF01648 4'-phosphopantetheinyl transferase superfamily FE249_01570 PF02824 TGS domain FE249_01570 PF04607 Region found in RelA / SpoT proteins FE249_01570 PF13291 ACT domain FE249_01575 PF01192 RNA polymerase Rpb6 FE249_01580 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FE249_01590 PF03167 Uracil DNA glycosylase superfamily FE249_01595 PF13307 Helicase C-terminal domain FE249_01595 PF04851 Type III restriction enzyme, res subunit FE249_01605 PF00872 Transposase, Mutator family FE249_01625 PF08448 PAS fold FE249_01625 PF08447 PAS fold FE249_01625 PF00990 Diguanylate cyclase, GGDEF domain FE249_01625 PF00563 EAL domain FE249_01635 PF00672 HAMP domain FE249_01635 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_01660 PF03330 Lytic transglycolase FE249_01660 PF05036 Sporulation related domain FE249_01670 PF13419 Haloacid dehalogenase-like hydrolase FE249_01675 PF00440 Bacterial regulatory proteins, tetR family FE249_01680 PF01799 [2Fe-2S] binding domain FE249_01680 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_01680 PF10518 TAT (twin-arginine translocation) pathway signal sequence FE249_01685 PF03450 CO dehydrogenase flavoprotein C-terminal domain FE249_01685 PF00941 FAD binding domain in molybdopterin dehydrogenase FE249_01690 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_01690 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_01695 PF16363 GDP-mannose 4,6 dehydratase FE249_01700 PF04321 RmlD substrate binding domain FE249_01705 PF00216 Bacterial DNA-binding protein FE249_01710 PF02653 Branched-chain amino acid transport system / permease component FE249_01715 PF00005 ABC transporter FE249_01720 PF13407 Periplasmic binding protein domain FE249_01725 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE249_01725 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE249_01730 PF00356 Bacterial regulatory proteins, lacI family FE249_01750 PF03717 Penicillin-binding Protein dimerisation domain FE249_01750 PF00905 Penicillin binding protein transpeptidase domain FE249_01760 PF06314 Acetoacetate decarboxylase (ADC) FE249_01770 PF01965 DJ-1/PfpI family FE249_01775 PF01965 DJ-1/PfpI family FE249_01790 PF03707 Bacterial signalling protein N terminal repeat FE249_01790 PF13188 PAS domain FE249_01790 PF00563 EAL domain FE249_01790 PF00990 Diguanylate cyclase, GGDEF domain FE249_01815 PF00005 ABC transporter FE249_01825 PF02653 Branched-chain amino acid transport system / permease component FE249_01830 PF13458 Periplasmic binding protein FE249_01835 PF13629 Pilus formation protein N terminal region FE249_01835 PF04972 BON domain FE249_01835 PF00263 Bacterial type II and III secretion system protein FE249_01850 PF03061 Thioesterase superfamily FE249_01855 PF00501 AMP-binding enzyme FE249_01855 PF14535 AMP-binding enzyme C-terminal domain FE249_01860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE249_01860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE249_01865 PF12804 MobA-like NTP transferase domain FE249_01865 PF14602 Hexapeptide repeat of succinyl-transferase FE249_01865 PF00132 Bacterial transferase hexapeptide (six repeats) FE249_01870 PF02625 XdhC and CoxI family FE249_01870 PF13478 XdhC Rossmann domain FE249_01885 PF02190 ATP-dependent protease La (LON) substrate-binding domain FE249_01885 PF00004 ATPase family associated with various cellular activities (AAA) FE249_01885 PF05362 Lon protease (S16) C-terminal proteolytic domain FE249_01900 PF00083 Sugar (and other) transporter FE249_01905 PF01081 KDPG and KHG aldolase FE249_01910 PF00920 Dehydratase family FE249_01915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FE249_01915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FE249_01930 PF00005 ABC transporter FE249_01930 PF08402 TOBE domain FE249_01935 PF00528 Binding-protein-dependent transport system inner membrane component FE249_01940 PF00528 Binding-protein-dependent transport system inner membrane component FE249_01950 PF08220 DeoR-like helix-turn-helix domain FE249_01955 PF00294 pfkB family carbohydrate kinase FE249_01960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE249_01975 PF03797 Autotransporter beta-domain FE249_01975 PF12951 Passenger-associated-transport-repeat FE249_01975 PF00082 Subtilase family FE249_01980 PF07690 Major Facilitator Superfamily FE249_01985 PF00672 HAMP domain FE249_01985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_01985 PF00512 His Kinase A (phospho-acceptor) domain FE249_01990 PF00072 Response regulator receiver domain FE249_01990 PF00486 Transcriptional regulatory protein, C terminal FE249_02005 PF03668 P-loop ATPase protein family FE249_02010 PF03610 PTS system fructose IIA component FE249_02010 PF03830 PTS system sorbose subfamily IIB component FE249_02015 PF00381 PTS HPr component phosphorylation site FE249_02020 PF01027 Inhibitor of apoptosis-promoting Bax1 FE249_02025 PF00312 Ribosomal protein S15 FE249_02030 PF16198 tRNA pseudouridylate synthase B C-terminal domain FE249_02030 PF01509 TruB family pseudouridylate synthase (N terminal domain) FE249_02035 PF02153 Prephenate dehydrogenase FE249_02040 PF00155 Aminotransferase class I and II FE249_02045 PF01842 ACT domain FE249_02045 PF00800 Prephenate dehydratase FE249_02045 PF01817 Chorismate mutase type II FE249_02050 PF00561 alpha/beta hydrolase fold FE249_02055 PF07021 Methionine biosynthesis protein MetW FE249_02055 PF00561 alpha/beta hydrolase fold FE249_02060 PF00005 ABC transporter FE249_02080 PF03692 Putative zinc- or iron-chelating domain FE249_02090 PF00107 Zinc-binding dehydrogenase FE249_02090 PF08240 Alcohol dehydrogenase GroES-like domain FE249_02095 PF02545 Maf-like protein FE249_02105 PF01370 NAD dependent epimerase/dehydratase family FE249_02110 PF01790 Prolipoprotein diacylglyceryl transferase FE249_02120 PF02578 Multi-copper polyphenol oxidoreductase laccase FE249_02135 PF01541 GIY-YIG catalytic domain FE249_02135 PF02151 UvrB/uvrC motif FE249_02135 PF08459 UvrC Helix-hairpin-helix N-terminal FE249_02140 PF02789 Cytosol aminopeptidase family, N-terminal domain FE249_02140 PF00883 Cytosol aminopeptidase family, catalytic domain FE249_02150 PF03548 Outer membrane lipoprotein carrier protein LolA FE249_02155 PF07722 Peptidase C26 FE249_02160 PF01557 Fumarylacetoacetate (FAA) hydrolase family FE249_02175 PF00707 Translation initiation factor IF-3, C-terminal domain FE249_02175 PF05198 Translation initiation factor IF-3, N-terminal domain FE249_02180 PF01416 tRNA pseudouridine synthase FE249_02185 PF02911 Formyl transferase, C-terminal domain FE249_02185 PF00551 Formyl transferase FE249_02190 PF01327 Polypeptide deformylase FE249_02195 PF00011 Hsp20/alpha crystallin family FE249_02205 PF01625 Peptide methionine sulfoxide reductase FE249_02210 PF13537 Glutamine amidotransferase domain FE249_02210 PF00156 Phosphoribosyl transferase domain FE249_02215 PF02674 Colicin V production protein FE249_02220 PF06745 KaiC FE249_02220 PF18073 Rubredoxin metal binding domain FE249_02230 PF00156 Phosphoribosyl transferase domain FE249_02240 PF02463 RecF/RecN/SMC N terminal domain FE249_02245 PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter FE249_02250 PF00119 ATP synthase A chain FE249_02255 PF00137 ATP synthase subunit C FE249_02260 PF00430 ATP synthase B/B' CF(0) FE249_02265 PF00430 ATP synthase B/B' CF(0) FE249_02270 PF01259 SAICAR synthetase FE249_02275 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FE249_02280 PF07885 Ion channel FE249_02280 PF02254 TrkA-N domain FE249_02285 PF02796 Helix-turn-helix domain of resolvase FE249_02285 PF00665 Integrase core domain FE249_02290 PF01695 IstB-like ATP binding protein FE249_02300 PF00872 Transposase, Mutator family FE249_02315 PF12111 Polyribonucleotide phosphorylase C terminal FE249_02315 PF00575 S1 RNA binding domain FE249_02315 PF10150 Ribonuclease E/G family FE249_02335 PF13181 Tetratricopeptide repeat FE249_02335 PF00535 Glycosyl transferase family 2 FE249_02345 PF02581 Thiamine monophosphate synthase FE249_02350 PF01791 DeoC/LacD family aldolase FE249_02360 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FE249_02360 PF09397 Ftsk gamma domain FE249_02360 PF01580 FtsK/SpoIIIE family FE249_02360 PF17854 FtsK alpha domain FE249_02365 PF00909 Ammonium Transporter Family FE249_02370 PF01494 FAD binding domain FE249_02380 PF01327 Polypeptide deformylase FE249_02385 PF01165 Ribosomal protein S21 FE249_02390 PF07681 DoxX FE249_02400 PF07690 Major Facilitator Superfamily FE249_02405 PF00013 KH domain FE249_02405 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FE249_02405 PF01138 3' exoribonuclease family, domain 1 FE249_02405 PF03725 3' exoribonuclease family, domain 2 FE249_02405 PF00575 S1 RNA binding domain FE249_02420 PF06480 FtsH Extracellular FE249_02420 PF17862 AAA+ lid domain FE249_02420 PF01434 Peptidase family M41 FE249_02420 PF00004 ATPase family associated with various cellular activities (AAA) FE249_02425 PF01171 PP-loop family FE249_02435 PF00691 OmpA family FE249_02445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FE249_02445 PF01409 tRNA synthetases class II core domain (F) FE249_02450 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FE249_02450 PF03147 Ferredoxin-fold anticodon binding domain FE249_02450 PF03484 tRNA synthetase B5 domain FE249_02450 PF01588 Putative tRNA binding domain FE249_02450 PF03483 B3/4 domain FE249_02465 PF02653 Branched-chain amino acid transport system / permease component FE249_02470 PF02653 Branched-chain amino acid transport system / permease component FE249_02470 PF11862 Domain of unknown function (DUF3382) FE249_02475 PF00005 ABC transporter FE249_02475 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE249_02480 PF00005 ABC transporter FE249_02485 PF03976 Polyphosphate kinase 2 (PPK2) FE249_02490 PF01467 Cytidylyltransferase-like FE249_02490 PF00294 pfkB family carbohydrate kinase FE249_02495 PF01430 Hsp33 protein FE249_02510 PF03824 High-affinity nickel-transport protein FE249_02530 PF00581 Rhodanese-like domain FE249_02540 PF00384 Molybdopterin oxidoreductase FE249_02540 PF01568 Molydopterin dinucleotide binding domain FE249_02540 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE249_02540 PF10518 TAT (twin-arginine translocation) pathway signal sequence FE249_02560 PF01040 UbiA prenyltransferase family FE249_02575 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FE249_02575 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE249_02580 PF00374 Nickel-dependent hydrogenase FE249_02585 PF01292 Prokaryotic cytochrome b561 FE249_02590 PF01750 Hydrogenase maturation protease FE249_02595 PF07449 Hydrogenase-1 expression protein HyaE FE249_02600 PF04809 HupH hydrogenase expression protein, C-terminal conserved region FE249_02605 PF00301 Rubredoxin FE249_02610 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FE249_02615 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE249_02620 PF00586 AIR synthase related protein, N-terminal domain FE249_02620 PF02769 AIR synthase related protein, C-terminal domain FE249_02625 PF07503 HypF finger FE249_02625 PF01300 Telomere recombination FE249_02625 PF00708 Acylphosphatase FE249_02625 PF17788 HypF Kae1-like domain FE249_02630 PF01924 Hydrogenase formation hypA family FE249_02635 PF01455 HupF/HypC family FE249_02640 PF02567 Phenazine biosynthesis-like protein FE249_02645 PF00293 NUDIX domain FE249_02650 PF03070 TENA/THI-4/PQQC family FE249_02660 PF01494 FAD binding domain FE249_02665 PF07883 Cupin domain FE249_02670 PF00005 ABC transporter FE249_02675 PF02653 Branched-chain amino acid transport system / permease component FE249_02685 PF00291 Pyridoxal-phosphate dependent enzyme FE249_02705 PF00672 HAMP domain FE249_02705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_02705 PF00512 His Kinase A (phospho-acceptor) domain FE249_02710 PF00072 Response regulator receiver domain FE249_02710 PF00486 Transcriptional regulatory protein, C terminal FE249_02725 PF00873 AcrB/AcrD/AcrF family FE249_02730 PF13533 Biotin-lipoyl like FE249_02735 PF02687 FtsX-like permease family FE249_02735 PF12704 MacB-like periplasmic core domain FE249_02735 PF00005 ABC transporter FE249_02740 PF03600 Citrate transporter FE249_02745 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FE249_02755 PF00005 ABC transporter FE249_02770 PF00005 ABC transporter FE249_02770 PF08402 TOBE domain FE249_02785 PF03544 Gram-negative bacterial TonB protein C-terminal FE249_02800 PF00171 Aldehyde dehydrogenase family FE249_02820 PF01783 Ribosomal L32p protein family FE249_02825 PF02504 Fatty acid synthesis protein FE249_02830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FE249_02830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FE249_02835 PF00216 Bacterial DNA-binding protein FE249_02840 PF13411 MerR HTH family regulatory protein FE249_02850 PF01979 Amidohydrolase family FE249_02855 PF00733 Asparagine synthase FE249_02855 PF13537 Glutamine amidotransferase domain FE249_02860 PF13439 Glycosyltransferase Family 4 FE249_02860 PF00534 Glycosyl transferases group 1 FE249_02870 PF01571 Aminomethyltransferase folate-binding domain FE249_02890 PF13181 Tetratricopeptide repeat FE249_02905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE249_02905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE249_02905 PF00378 Enoyl-CoA hydratase/isomerase FE249_02910 PF13193 AMP-binding enzyme C-terminal domain FE249_02910 PF00501 AMP-binding enzyme FE249_02915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_02915 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_02915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_02920 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_02920 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_02920 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_02925 PF07650 KH domain FE249_02925 PF01926 50S ribosome-binding GTPase FE249_02930 PF00035 Double-stranded RNA binding motif FE249_02930 PF14622 Ribonuclease-III-like FE249_02935 PF10502 Signal peptidase, peptidase S26 FE249_02940 PF00768 D-alanyl-D-alanine carboxypeptidase FE249_02940 PF07943 Penicillin-binding protein 5, C-terminal domain FE249_02950 PF14492 Elongation Factor G, domain II FE249_02950 PF00679 Elongation factor G C-terminus FE249_02950 PF03764 Elongation factor G, domain IV FE249_02950 PF03144 Elongation factor Tu domain 2 FE249_02950 PF00009 Elongation factor Tu GTP binding domain FE249_02960 PF01209 ubiE/COQ5 methyltransferase family FE249_02970 PF01425 Amidase FE249_02975 PF00465 Iron-containing alcohol dehydrogenase FE249_02980 PF00300 Histidine phosphatase superfamily (branch 1) FE249_02985 PF02798 Glutathione S-transferase, N-terminal domain FE249_02985 PF00043 Glutathione S-transferase, C-terminal domain FE249_02990 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FE249_02990 PF14572 Phosphoribosyl synthetase-associated domain FE249_03000 PF04376 Arginine-tRNA-protein transferase, N terminus FE249_03000 PF04377 Arginine-tRNA-protein transferase, C terminus FE249_03015 PF01472 PUA domain FE249_03015 PF00696 Amino acid kinase family FE249_03020 PF01018 GTP1/OBG FE249_03020 PF01926 50S ribosome-binding GTPase FE249_03025 PF01016 Ribosomal L27 protein FE249_03030 PF00829 Ribosomal prokaryotic L21 protein FE249_03040 PF02653 Branched-chain amino acid transport system / permease component FE249_03050 PF13439 Glycosyltransferase Family 4 FE249_03050 PF00534 Glycosyl transferases group 1 FE249_03055 PF03481 Putative GTP-binding controlling metal-binding FE249_03055 PF01300 Telomere recombination FE249_03060 PF02033 Ribosome-binding factor A FE249_03065 PF04760 Translation initiation factor IF-2, N-terminal region FE249_03065 PF00009 Elongation factor Tu GTP binding domain FE249_03065 PF08364 Bacterial translation initiation factor IF-2 associated region FE249_03065 PF11987 Translation-initiation factor 2 FE249_03075 PF13184 NusA-like KH domain FE249_03075 PF08529 NusA N-terminal domain FE249_03075 PF00575 S1 RNA binding domain FE249_03080 PF02576 RimP N-terminal domain FE249_03080 PF17384 RimP C-terminal SH3 domain FE249_03090 PF04333 MlaA lipoprotein FE249_03095 PF02219 Methylenetetrahydrofolate reductase FE249_03100 PF00580 UvrD/REP helicase N-terminal domain FE249_03100 PF13361 UvrD-like helicase C-terminal domain FE249_03115 PF00557 Metallopeptidase family M24 FE249_03115 PF01321 Creatinase/Prolidase N-terminal domain FE249_03120 PF03379 CcmB protein FE249_03125 PF00005 ABC transporter FE249_03130 PF00330 Aconitase family (aconitate hydratase) FE249_03130 PF00694 Aconitase C-terminal domain FE249_03140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FE249_03140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FE249_03140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FE249_03145 PF00300 Histidine phosphatase superfamily (branch 1) FE249_03155 PF00664 ABC transporter transmembrane region FE249_03155 PF00005 ABC transporter FE249_03165 PF13439 Glycosyltransferase Family 4 FE249_03165 PF00534 Glycosyl transferases group 1 FE249_03190 PF00011 Hsp20/alpha crystallin family FE249_03195 PF01435 Peptidase family M48 FE249_03200 PF03737 Aldolase/RraA FE249_03205 PF00171 Aldehyde dehydrogenase family FE249_03210 PF00701 Dihydrodipicolinate synthetase family FE249_03215 PF07690 Major Facilitator Superfamily FE249_03225 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_03225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE249_03235 PF02558 Ketopantoate reductase PanE/ApbA FE249_03235 PF08546 Ketopantoate reductase PanE/ApbA C terminal FE249_03245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FE249_03250 PF00294 pfkB family carbohydrate kinase FE249_03255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE249_03255 PF00381 PTS HPr component phosphorylation site FE249_03255 PF00391 PEP-utilising enzyme, mobile domain FE249_03255 PF05524 PEP-utilising enzyme, N-terminal FE249_03255 PF02896 PEP-utilising enzyme, TIM barrel domain FE249_03260 PF00356 Bacterial regulatory proteins, lacI family FE249_03265 PF03477 ATP cone domain FE249_03265 PF02867 Ribonucleotide reductase, barrel domain FE249_03265 PF00317 Ribonucleotide reductase, all-alpha domain FE249_03280 PF00180 Isocitrate/isopropylmalate dehydrogenase FE249_03285 PF00490 Delta-aminolevulinic acid dehydratase FE249_03290 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FE249_03300 PF00224 Pyruvate kinase, barrel domain FE249_03300 PF02887 Pyruvate kinase, alpha/beta domain FE249_03315 PF13350 Tyrosine phosphatase family FE249_03320 PF00691 OmpA family FE249_03325 PF00691 OmpA family FE249_03335 PF02470 MlaD protein FE249_03345 PF08471 Class II vitamin B12-dependent ribonucleotide reductase FE249_03345 PF02867 Ribonucleotide reductase, barrel domain FE249_03355 PF00113 Enolase, C-terminal TIM barrel domain FE249_03355 PF03952 Enolase, N-terminal domain FE249_03365 PF01103 Surface antigen FE249_03365 PF07244 Surface antigen variable number repeat FE249_03370 PF00849 RNA pseudouridylate synthase FE249_03370 PF01479 S4 domain FE249_03375 PF00004 ATPase family associated with various cellular activities (AAA) FE249_03375 PF16193 AAA C-terminal domain FE249_03375 PF12002 MgsA AAA+ ATPase C terminal FE249_03390 PF06793 Uncharacterised protein family (UPF0262) FE249_03410 PF12344 Ultra-violet resistance protein B FE249_03410 PF02151 UvrB/uvrC motif FE249_03410 PF17757 UvrB interaction domain FE249_03410 PF00271 Helicase conserved C-terminal domain FE249_03410 PF04851 Type III restriction enzyme, res subunit FE249_03425 PF03232 Ubiquinone biosynthesis protein COQ7 FE249_03435 PF00578 AhpC/TSA family FE249_03440 PF08335 GlnD PII-uridylyltransferase FE249_03440 PF03710 Glutamate-ammonia ligase adenylyltransferase FE249_03450 PF01012 Electron transfer flavoprotein domain FE249_03455 PF01012 Electron transfer flavoprotein domain FE249_03455 PF00766 Electron transfer flavoprotein FAD-binding domain FE249_03460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE249_03460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE249_03465 PF00892 EamA-like transporter family FE249_03470 PF00583 Acetyltransferase (GNAT) family FE249_03470 PF13380 CoA binding domain FE249_03470 PF13607 Succinyl-CoA ligase like flavodoxin domain FE249_03485 PF02705 K+ potassium transporter FE249_03490 PF02754 Cysteine-rich domain FE249_03495 PF06725 3D domain FE249_03495 PF03562 MltA specific insert domain FE249_03505 PF00300 Histidine phosphatase superfamily (branch 1) FE249_03510 PF02321 Outer membrane efflux protein FE249_03515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE249_03520 PF00873 AcrB/AcrD/AcrF family FE249_03525 PF00873 AcrB/AcrD/AcrF family FE249_03530 PF08323 Starch synthase catalytic domain FE249_03530 PF00534 Glycosyl transferases group 1 FE249_03535 PF00483 Nucleotidyl transferase FE249_03540 PF00343 Carbohydrate phosphorylase FE249_03545 PF00814 Glycoprotease family FE249_03550 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FE249_03550 PF03900 Porphobilinogen deaminase, C-terminal domain FE249_03575 PF04226 Transglycosylase associated protein FE249_03585 PF01370 NAD dependent epimerase/dehydratase family FE249_03590 PF00535 Glycosyl transferase family 2 FE249_03605 PF01593 Flavin containing amine oxidoreductase FE249_03610 PF01047 MarR family FE249_03610 PF00480 ROK family FE249_03625 PF13860 FlgD Ig-like domain FE249_03625 PF13861 FlgD Tudor-like domain FE249_03625 PF03963 Flagellar hook capping protein - N-terminal region FE249_03635 PF07559 Flagellar basal body protein FlaE FE249_03635 PF00460 Flagella basal body rod protein FE249_03635 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE249_03650 PF00700 Bacterial flagellin C-terminal helical region FE249_03650 PF00669 Bacterial flagellin N-terminal helical region FE249_03680 PF00155 Aminotransferase class I and II FE249_03690 PF13007 Transposase C of IS166 homeodomain FE249_03690 PF13005 zinc-finger binding domain of transposase IS66 FE249_03690 PF13817 IS66 C-terminal element FE249_03690 PF03050 Transposase IS66 family FE249_03695 PF05717 IS66 Orf2 like protein FE249_03710 PF05717 IS66 Orf2 like protein FE249_03715 PF13817 IS66 C-terminal element FE249_03715 PF13007 Transposase C of IS166 homeodomain FE249_03715 PF03050 Transposase IS66 family FE249_03715 PF13005 zinc-finger binding domain of transposase IS66 FE249_03780 PF07724 AAA domain (Cdc48 subfamily) FE249_03780 PF17871 AAA lid domain FE249_03780 PF02861 Clp amino terminal domain, pathogenicity island component FE249_03780 PF10431 C-terminal, D2-small domain, of ClpB protein FE249_03780 PF00004 ATPase family associated with various cellular activities (AAA) FE249_03790 PF01066 CDP-alcohol phosphatidyltransferase FE249_03795 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FE249_03810 PF02391 MoaE protein FE249_03815 PF00486 Transcriptional regulatory protein, C terminal FE249_03815 PF00072 Response regulator receiver domain FE249_03820 PF06463 Molybdenum Cofactor Synthesis C FE249_03820 PF04055 Radical SAM superfamily FE249_03825 PF02401 LytB protein FE249_03830 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FE249_03830 PF02779 Transketolase, pyrimidine binding domain FE249_03830 PF02780 Transketolase, C-terminal domain FE249_03845 PF00919 Uncharacterized protein family UPF0004 FE249_03845 PF18693 TRAM domain FE249_03845 PF04055 Radical SAM superfamily FE249_03850 PF04794 YdjC-like protein FE249_03865 PF11953 Domain of unknown function (DUF3470) FE249_03865 PF00037 4Fe-4S binding domain FE249_03870 PF01814 Hemerythrin HHE cation binding domain FE249_03870 PF04405 Domain of Unknown function (DUF542) FE249_03880 PF02082 Transcriptional regulator FE249_03885 PF03880 DbpA RNA binding domain FE249_03885 PF00270 DEAD/DEAH box helicase FE249_03885 PF00271 Helicase conserved C-terminal domain FE249_03890 PF01144 Coenzyme A transferase FE249_03895 PF01144 Coenzyme A transferase FE249_03900 PF00108 Thiolase, N-terminal domain FE249_03900 PF02803 Thiolase, C-terminal domain FE249_03905 PF00775 Dioxygenase FE249_03910 PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal FE249_03910 PF00775 Dioxygenase FE249_03915 PF01494 FAD binding domain FE249_03920 PF00141 Peroxidase FE249_03925 PF02653 Branched-chain amino acid transport system / permease component FE249_03935 PF00005 ABC transporter FE249_03950 PF00294 pfkB family carbohydrate kinase FE249_03955 PF03786 D-mannonate dehydratase (UxuA) FE249_03960 PF01232 Mannitol dehydrogenase Rossmann domain FE249_03960 PF08125 Mannitol dehydrogenase C-terminal domain FE249_03970 PF07729 FCD domain FE249_03970 PF00392 Bacterial regulatory proteins, gntR family FE249_03975 PF08666 SAF domain FE249_03975 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FE249_03980 PF00005 ABC transporter FE249_03985 PF00005 ABC transporter FE249_03985 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE249_03990 PF02653 Branched-chain amino acid transport system / permease component FE249_03995 PF13458 Periplasmic binding protein FE249_04005 PF00155 Aminotransferase class I and II FE249_04010 PF06968 Biotin and Thiamin Synthesis associated domain FE249_04010 PF04055 Radical SAM superfamily FE249_04015 PF00202 Aminotransferase class-III FE249_04040 PF01292 Prokaryotic cytochrome b561 FE249_04050 PF04452 RNA methyltransferase FE249_04055 PF01040 UbiA prenyltransferase family FE249_04065 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FE249_04075 PF00890 FAD binding domain FE249_04075 PF02910 Fumarate reductase flavoprotein C-term FE249_04080 PF13085 2Fe-2S iron-sulfur cluster binding domain FE249_04080 PF13237 4Fe-4S dicluster domain FE249_04095 PF00672 HAMP domain FE249_04095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_04095 PF00512 His Kinase A (phospho-acceptor) domain FE249_04095 PF13755 Sensor N-terminal transmembrane domain FE249_04095 PF13756 Stimulus-sensing domain FE249_04100 PF00072 Response regulator receiver domain FE249_04100 PF00486 Transcriptional regulatory protein, C terminal FE249_04110 PF01293 Phosphoenolpyruvate carboxykinase FE249_04120 PF07687 Peptidase dimerisation domain FE249_04120 PF01546 Peptidase family M20/M25/M40 FE249_04125 PF01914 MarC family integral membrane protein FE249_04130 PF01047 MarR family FE249_04135 PF00529 HlyD membrane-fusion protein of T1SS FE249_04135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE249_04140 PF07690 Major Facilitator Superfamily FE249_04175 PF03412 Peptidase C39 family FE249_04175 PF00005 ABC transporter FE249_04175 PF00664 ABC transporter transmembrane region FE249_04185 PF01618 MotA/TolQ/ExbB proton channel family FE249_04190 PF00691 OmpA family FE249_04190 PF13677 Membrane MotB of proton-channel complex MotA/MotB FE249_04195 PF00291 Pyridoxal-phosphate dependent enzyme FE249_04205 PF00535 Glycosyl transferase family 2 FE249_04210 PF08534 Redoxin FE249_04210 PF00462 Glutaredoxin FE249_04225 PF01668 SmpB protein FE249_04230 PF00701 Dihydrodipicolinate synthetase family FE249_04235 PF01464 Transglycosylase SLT domain FE249_04240 PF04608 Phosphatidylglycerophosphatase A FE249_04245 PF02464 Competence-damaged protein FE249_04245 PF18146 Damage-inducible protein CinA KH domain FE249_04245 PF00994 Probable molybdopterin binding domain FE249_04250 PF00563 EAL domain FE249_04250 PF00990 Diguanylate cyclase, GGDEF domain FE249_04250 PF03707 Bacterial signalling protein N terminal repeat FE249_04270 PF12849 PBP superfamily domain FE249_04275 PF00528 Binding-protein-dependent transport system inner membrane component FE249_04280 PF00528 Binding-protein-dependent transport system inner membrane component FE249_04300 PF01196 Ribosomal protein L17 FE249_04305 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FE249_04305 PF01000 RNA polymerase Rpb3/RpoA insert domain FE249_04305 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FE249_04310 PF00411 Ribosomal protein S11 FE249_04315 PF00416 Ribosomal protein S13/S18 FE249_04320 PF05191 Adenylate kinase, active site lid FE249_04325 PF00344 SecY translocase FE249_04330 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FE249_04335 PF00327 Ribosomal protein L30p/L7e FE249_04340 PF03719 Ribosomal protein S5, C-terminal domain FE249_04340 PF00333 Ribosomal protein S5, N-terminal domain FE249_04345 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FE249_04350 PF00347 Ribosomal protein L6 FE249_04355 PF00410 Ribosomal protein S8 FE249_04360 PF00253 Ribosomal protein S14p/S29e FE249_04365 PF00281 Ribosomal protein L5 FE249_04365 PF00673 ribosomal L5P family C-terminus FE249_04370 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FE249_04370 PF00467 KOW motif FE249_04375 PF00238 Ribosomal protein L14p/L23e FE249_04380 PF00366 Ribosomal protein S17 FE249_04385 PF00831 Ribosomal L29 protein FE249_04390 PF00252 Ribosomal protein L16p/L10e FE249_04395 PF07650 KH domain FE249_04395 PF00189 Ribosomal protein S3, C-terminal domain FE249_04400 PF00237 Ribosomal protein L22p/L17e FE249_04405 PF00203 Ribosomal protein S19 FE249_04410 PF03947 Ribosomal Proteins L2, C-terminal domain FE249_04410 PF00181 Ribosomal Proteins L2, RNA binding domain FE249_04415 PF00276 Ribosomal protein L23 FE249_04420 PF00573 Ribosomal protein L4/L1 family FE249_04425 PF00297 Ribosomal protein L3 FE249_04430 PF00338 Ribosomal protein S10p/S20e FE249_04435 PF03144 Elongation factor Tu domain 2 FE249_04435 PF03143 Elongation factor Tu C-terminal domain FE249_04435 PF00009 Elongation factor Tu GTP binding domain FE249_04440 PF00177 Ribosomal protein S7p/S5e FE249_04445 PF00164 Ribosomal protein S12/S23 FE249_04450 PF04997 RNA polymerase Rpb1, domain 1 FE249_04450 PF00623 RNA polymerase Rpb1, domain 2 FE249_04450 PF04983 RNA polymerase Rpb1, domain 3 FE249_04450 PF04998 RNA polymerase Rpb1, domain 5 FE249_04450 PF05000 RNA polymerase Rpb1, domain 4 FE249_04455 PF04563 RNA polymerase beta subunit FE249_04455 PF04561 RNA polymerase Rpb2, domain 2 FE249_04455 PF04565 RNA polymerase Rpb2, domain 3 FE249_04455 PF10385 RNA polymerase beta subunit external 1 domain FE249_04455 PF04560 RNA polymerase Rpb2, domain 7 FE249_04455 PF00562 RNA polymerase Rpb2, domain 6 FE249_04460 PF00542 Ribosomal protein L7/L12 C-terminal domain FE249_04460 PF16320 Ribosomal protein L7/L12 dimerisation domain FE249_04465 PF00466 Ribosomal protein L10 FE249_04470 PF00687 Ribosomal protein L1p/L10e family FE249_04475 PF03946 Ribosomal protein L11, N-terminal domain FE249_04475 PF00298 Ribosomal protein L11, RNA binding domain FE249_04480 PF03922 OmpW family FE249_04485 PF00248 Aldo/keto reductase family FE249_04490 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE249_04495 PF18407 GCN5-related N-acetyltransferase like domain FE249_04495 PF13344 Haloacid dehalogenase-like hydrolase FE249_04500 PF01180 Dihydroorotate dehydrogenase FE249_04510 PF01557 Fumarylacetoacetate (FAA) hydrolase family FE249_04515 PF00202 Aminotransferase class-III FE249_04520 PF00171 Aldehyde dehydrogenase family FE249_04525 PF06965 Na+/H+ antiporter 1 FE249_04525 PF01343 Peptidase family S49 FE249_04535 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_04535 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_04545 PF01593 Flavin containing amine oxidoreductase FE249_04550 PF02653 Branched-chain amino acid transport system / permease component FE249_04555 PF00005 ABC transporter FE249_04560 PF13407 Periplasmic binding protein domain FE249_04570 PF00664 ABC transporter transmembrane region FE249_04570 PF00005 ABC transporter FE249_04580 PF13417 Glutathione S-transferase, N-terminal domain FE249_04580 PF00043 Glutathione S-transferase, C-terminal domain FE249_04595 PF00999 Sodium/hydrogen exchanger family FE249_04595 PF02254 TrkA-N domain FE249_04600 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_04600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE249_04605 PF01474 Class-II DAHP synthetase family FE249_04625 PF00795 Carbon-nitrogen hydrolase FE249_04625 PF02540 NAD synthase FE249_04635 PF00216 Bacterial DNA-binding protein FE249_04650 PF03776 Septum formation topological specificity factor MinE FE249_04655 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FE249_04660 PF03775 Septum formation inhibitor MinC, C-terminal domain FE249_04665 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE249_04665 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE249_04670 PF07549 SecD/SecF GG Motif FE249_04670 PF02355 Protein export membrane protein FE249_04675 PF02355 Protein export membrane protein FE249_04675 PF07549 SecD/SecF GG Motif FE249_04695 PF13662 Toprim domain FE249_04695 PF02132 RecR protein FE249_04700 PF02575 YbaB/EbfC DNA-binding family FE249_04705 PF12169 DNA polymerase III subunits gamma and tau domain III FE249_04705 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FE249_04705 PF12170 DNA polymerase III tau subunit V interacting with alpha FE249_04715 PF00293 NUDIX domain FE249_04715 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain FE249_04715 PF09297 NADH pyrophosphatase zinc ribbon domain FE249_04720 PF03358 NADPH-dependent FMN reductase FE249_04745 PF07726 ATPase family associated with various cellular activities (AAA) FE249_04745 PF17863 AAA lid domain FE249_04755 PF00293 NUDIX domain FE249_04760 PF01743 Poly A polymerase head domain FE249_04760 PF12627 Probable RNA and SrmB- binding site of polymerase A FE249_04760 PF13735 tRNA nucleotidyltransferase domain 2 putative FE249_04765 PF01728 FtsJ-like methyltransferase FE249_04770 PF02541 Ppx/GppA phosphatase family FE249_04785 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FE249_04785 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FE249_04790 PF00309 Sigma-54 factor, Activator interacting domain (AID) FE249_04790 PF04963 Sigma-54 factor, core binding domain FE249_04790 PF04552 Sigma-54, DNA binding domain FE249_04805 PF00437 Type II/IV secretion system protein FE249_04825 PF00294 pfkB family carbohydrate kinase FE249_04840 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FE249_04840 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FE249_04850 PF01520 N-acetylmuramoyl-L-alanine amidase FE249_04860 PF00180 Isocitrate/isopropylmalate dehydrogenase FE249_04860 PF18324 Hypothetical protein TT1725 FE249_04865 PF07690 Major Facilitator Superfamily FE249_04870 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FE249_04870 PF02542 YgbB family FE249_04875 PF01207 Dihydrouridine synthase (Dus) FE249_04880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_04880 PF00512 His Kinase A (phospho-acceptor) domain FE249_04880 PF00989 PAS fold FE249_04885 PF02954 Bacterial regulatory protein, Fis family FE249_04885 PF00072 Response regulator receiver domain FE249_04885 PF00158 Sigma-54 interaction domain FE249_04890 PF00672 HAMP domain FE249_04890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_04895 PF02954 Bacterial regulatory protein, Fis family FE249_04895 PF00072 Response regulator receiver domain FE249_04895 PF00158 Sigma-54 interaction domain FE249_04905 PF00436 Single-strand binding protein family FE249_04910 PF02322 Cytochrome bd terminal oxidase subunit II FE249_04915 PF01654 Cytochrome bd terminal oxidase subunit I FE249_04925 PF01062 Bestrophin, RFP-TM, chloride channel FE249_04930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_04930 PF03466 LysR substrate binding domain FE249_04935 PF00384 Molybdopterin oxidoreductase FE249_04945 PF17755 UvrA DNA-binding domain FE249_04945 PF17760 UvrA interaction domain FE249_04965 PF13603 Leucyl-tRNA synthetase, Domain 2 FE249_04965 PF08264 Anticodon-binding domain of tRNA FE249_04965 PF00133 tRNA synthetases class I (I, L, M and V) FE249_04985 PF01168 Alanine racemase, N-terminal domain FE249_04990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE249_04990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE249_04995 PF04286 Protein of unknown function (DUF445) FE249_05000 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FE249_05000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FE249_05010 PF14572 Phosphoribosyl synthetase-associated domain FE249_05010 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FE249_05020 PF00156 Phosphoribosyl transferase domain FE249_05020 PF01738 Dienelactone hydrolase family FE249_05030 PF01734 Patatin-like phospholipase FE249_05040 PF17831 Pyruvate dehydrogenase E1 component middle domain FE249_05040 PF00456 Transketolase, thiamine diphosphate binding domain FE249_05045 PF01037 Lrp/AsnC ligand binding domain FE249_05050 PF03707 Bacterial signalling protein N terminal repeat FE249_05050 PF00990 Diguanylate cyclase, GGDEF domain FE249_05050 PF00563 EAL domain FE249_05055 PF07690 Major Facilitator Superfamily FE249_05060 PF00355 Rieske [2Fe-2S] domain FE249_05060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FE249_05065 PF01053 Cys/Met metabolism PLP-dependent enzyme FE249_05070 PF04324 BFD-like [2Fe-2S] binding domain FE249_05070 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_05075 PF01266 FAD dependent oxidoreductase FE249_05080 PF01266 FAD dependent oxidoreductase FE249_05085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_05085 PF03466 LysR substrate binding domain FE249_05090 PF00005 ABC transporter FE249_05090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FE249_05095 PF00528 Binding-protein-dependent transport system inner membrane component FE249_05095 PF12911 N-terminal TM domain of oligopeptide transport permease C FE249_05100 PF00528 Binding-protein-dependent transport system inner membrane component FE249_05105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FE249_05125 PF01810 LysE type translocator FE249_05135 PF02470 MlaD protein FE249_05155 PF06761 Intracellular multiplication and human macrophage-killing FE249_05155 PF14331 ImcF-related N-terminal domain FE249_05155 PF06744 Type VI secretion protein IcmF C-terminal FE249_05160 PF00691 OmpA family FE249_05160 PF04972 BON domain FE249_05165 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE FE249_05185 PF06715 Gp5 C-terminal repeat (3 copies) FE249_05185 PF04717 Type VI secretion system, phage-baseplate injector FE249_05195 PF05860 haemagglutination activity domain FE249_05205 PF03793 PASTA domain FE249_05205 PF00069 Protein kinase domain FE249_05210 PF00034 Cytochrome c FE249_05220 PF09382 RQC domain FE249_05220 PF00270 DEAD/DEAH box helicase FE249_05220 PF00271 Helicase conserved C-terminal domain FE249_05220 PF00570 HRDC domain FE249_05220 PF16124 RecQ zinc-binding FE249_05230 PF01053 Cys/Met metabolism PLP-dependent enzyme FE249_05235 PF01433 Peptidase family M1 domain FE249_05235 PF11940 Domain of unknown function (DUF3458) Ig-like fold FE249_05235 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FE249_05255 PF13520 Amino acid permease FE249_05260 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FE249_05260 PF01243 Pyridoxamine 5'-phosphate oxidase FE249_05265 PF13417 Glutathione S-transferase, N-terminal domain FE249_05265 PF00043 Glutathione S-transferase, C-terminal domain FE249_05275 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_05275 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_05275 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_05280 PF00550 Phosphopantetheine attachment site FE249_05280 PF08240 Alcohol dehydrogenase GroES-like domain FE249_05280 PF16197 Ketoacyl-synthetase C-terminal extension FE249_05280 PF00109 Beta-ketoacyl synthase, N-terminal domain FE249_05280 PF02801 Beta-ketoacyl synthase, C-terminal domain FE249_05280 PF08659 KR domain FE249_05280 PF14765 Polyketide synthase dehydratase FE249_05280 PF00698 Acyl transferase domain FE249_05285 PF00106 short chain dehydrogenase FE249_05290 PF00586 AIR synthase related protein, N-terminal domain FE249_05290 PF02769 AIR synthase related protein, C-terminal domain FE249_05295 PF01029 NusB family FE249_05300 PF00885 6,7-dimethyl-8-ribityllumazine synthase FE249_05305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FE249_05305 PF00925 GTP cyclohydrolase II FE249_05310 PF00677 Lumazine binding domain FE249_05315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FE249_05315 PF01872 RibD C-terminal domain FE249_05320 PF03477 ATP cone domain FE249_05325 PF00464 Serine hydroxymethyltransferase FE249_05330 PF02502 Ribose/Galactose Isomerase FE249_05340 PF03966 Trm112p-like protein FE249_05350 PF00085 Thioredoxin FE249_05360 PF01312 FlhB HrpN YscU SpaS Family FE249_05365 PF01311 Bacterial export proteins, family 1 FE249_05370 PF01313 Bacterial export proteins, family 3 FE249_05375 PF02049 Flagellar hook-basal body complex protein FliE FE249_05380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE249_05390 PF00813 FliP family FE249_05395 PF00989 PAS fold FE249_05395 PF00672 HAMP domain FE249_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_05395 PF00512 His Kinase A (phospho-acceptor) domain FE249_05405 PF00468 Ribosomal protein L34 FE249_05410 PF00825 Ribonuclease P FE249_05415 PF01809 Putative membrane protein insertion efficiency factor FE249_05420 PF02096 60Kd inner membrane protein FE249_05420 PF14849 YidC periplasmic domain FE249_05425 PF01926 50S ribosome-binding GTPase FE249_05430 PF00696 Amino acid kinase family FE249_05435 PF00672 HAMP domain FE249_05435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_05435 PF02203 Tar ligand binding domain homologue FE249_05440 PF01595 Cyclin M transmembrane N-terminal domain FE249_05440 PF03471 Transporter associated domain FE249_05440 PF00571 CBS domain FE249_05455 PF00180 Isocitrate/isopropylmalate dehydrogenase FE249_05460 PF00694 Aconitase C-terminal domain FE249_05465 PF00330 Aconitase family (aconitate hydratase) FE249_05470 PF01245 Ribosomal protein L19 FE249_05475 PF01746 tRNA (Guanine-1)-methyltransferase FE249_05480 PF01782 RimM N-terminal domain FE249_05485 PF00886 Ribosomal protein S16 FE249_05490 PF02978 Signal peptide binding domain FE249_05490 PF02881 SRP54-type protein, helical bundle domain FE249_05490 PF00448 SRP54-type protein, GTPase domain FE249_05495 PF02233 NAD(P) transhydrogenase beta subunit FE249_05500 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FE249_05505 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FE249_05505 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FE249_05510 PF00574 Clp protease FE249_05515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_05515 PF03466 LysR substrate binding domain FE249_05525 PF00392 Bacterial regulatory proteins, gntR family FE249_05525 PF07729 FCD domain FE249_05530 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FE249_05535 PF02104 SURF1 family FE249_05540 PF00510 Cytochrome c oxidase subunit III FE249_05545 PF01040 UbiA prenyltransferase family FE249_05550 PF00115 Cytochrome C and Quinol oxidase polypeptide I FE249_05555 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FE249_05555 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FE249_05560 PF08241 Methyltransferase domain FE249_05575 PF00899 ThiF family FE249_05575 PF00581 Rhodanese-like domain FE249_05580 PF06508 Queuosine biosynthesis protein QueC FE249_05590 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_05590 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_05595 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_05595 PF01799 [2Fe-2S] binding domain FE249_05600 PF03450 CO dehydrogenase flavoprotein C-terminal domain FE249_05600 PF00941 FAD binding domain in molybdopterin dehydrogenase FE249_05605 PF08946 Osmosensory transporter coiled coil FE249_05605 PF00083 Sugar (and other) transporter FE249_05610 PF00512 His Kinase A (phospho-acceptor) domain FE249_05610 PF00672 HAMP domain FE249_05610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_05615 PF00072 Response regulator receiver domain FE249_05615 PF00486 Transcriptional regulatory protein, C terminal FE249_05620 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FE249_05620 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FE249_05625 PF01738 Dienelactone hydrolase family FE249_05640 PF00391 PEP-utilising enzyme, mobile domain FE249_05640 PF02896 PEP-utilising enzyme, TIM barrel domain FE249_05640 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FE249_05645 PF02092 Glycyl-tRNA synthetase beta subunit FE249_05645 PF05746 DALR anticodon binding domain FE249_05650 PF02091 Glycyl-tRNA synthetase alpha subunit FE249_05660 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_05660 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_05660 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_05665 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FE249_05675 PF17284 Spermidine synthase tetramerisation domain FE249_05680 PF02675 S-adenosylmethionine decarboxylase FE249_05695 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FE249_05700 PF03129 Anticodon binding domain FE249_05700 PF02824 TGS domain FE249_05700 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE249_05700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FE249_05715 PF09339 IclR helix-turn-helix domain FE249_05715 PF01614 Bacterial transcriptional regulator FE249_05725 PF00005 ABC transporter FE249_05730 PF00005 ABC transporter FE249_05730 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE249_05740 PF02653 Branched-chain amino acid transport system / permease component FE249_05750 PF08267 Cobalamin-independent synthase, N-terminal domain FE249_05750 PF01717 Cobalamin-independent synthase, Catalytic domain FE249_05755 PF07690 Major Facilitator Superfamily FE249_05760 PF00920 Dehydratase family FE249_05765 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_05765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_05775 PF02653 Branched-chain amino acid transport system / permease component FE249_05785 PF00872 Transposase, Mutator family FE249_05795 PF00005 ABC transporter FE249_05800 PF13407 Periplasmic binding protein domain FE249_05810 PF03551 Transcriptional regulator PadR-like family FE249_05845 PF03466 LysR substrate binding domain FE249_05845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_05860 PF13291 ACT domain FE249_05860 PF00291 Pyridoxal-phosphate dependent enzyme FE249_05880 PF07687 Peptidase dimerisation domain FE249_05880 PF01546 Peptidase family M20/M25/M40 FE249_05885 PF00291 Pyridoxal-phosphate dependent enzyme FE249_05890 PF01037 Lrp/AsnC ligand binding domain FE249_05895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_05895 PF03466 LysR substrate binding domain FE249_05900 PF00561 alpha/beta hydrolase fold FE249_05900 PF00364 Biotin-requiring enzyme FE249_05920 PF02653 Branched-chain amino acid transport system / permease component FE249_05925 PF02653 Branched-chain amino acid transport system / permease component FE249_05930 PF00005 ABC transporter FE249_05935 PF13407 Periplasmic binding protein domain FE249_05940 PF09339 IclR helix-turn-helix domain FE249_05940 PF01614 Bacterial transcriptional regulator FE249_05950 PF03717 Penicillin-binding Protein dimerisation domain FE249_05950 PF00905 Penicillin binding protein transpeptidase domain FE249_05955 PF07729 FCD domain FE249_05955 PF00392 Bacterial regulatory proteins, gntR family FE249_05960 PF02469 Fasciclin domain FE249_05965 PF01960 ArgJ family FE249_05975 PF02810 SEC-C motif FE249_05975 PF07517 SecA DEAD-like domain FE249_05975 PF01043 SecA preprotein cross-linking domain FE249_05975 PF07516 SecA Wing and Scaffold domain FE249_05985 PF01047 MarR family FE249_05990 PF00380 Ribosomal protein S9/S16 FE249_05995 PF00572 Ribosomal protein L13 FE249_06000 PF01370 NAD dependent epimerase/dehydratase family FE249_06005 PF07879 PHB/PHA accumulation regulator DNA-binding domain FE249_06005 PF05233 PHB accumulation regulatory domain FE249_06010 PF01925 Sulfite exporter TauE/SafE FE249_06020 PF02803 Thiolase, C-terminal domain FE249_06020 PF00108 Thiolase, N-terminal domain FE249_06025 PF01144 Coenzyme A transferase FE249_06030 PF01144 Coenzyme A transferase FE249_06035 PF00202 Aminotransferase class-III FE249_06045 PF02021 Uncharacterised protein family UPF0102 FE249_06055 PF00581 Rhodanese-like domain FE249_06060 PF01053 Cys/Met metabolism PLP-dependent enzyme FE249_06065 PF01502 Phosphoribosyl-AMP cyclohydrolase FE249_06070 PF01521 Iron-sulphur cluster biosynthesis FE249_06075 PF01883 Iron-sulfur cluster assembly protein FE249_06085 PF00266 Aminotransferase class-V FE249_06090 PF01458 Uncharacterized protein family (UPF0051) FE249_06095 PF00005 ABC transporter FE249_06100 PF01458 Uncharacterized protein family (UPF0051) FE249_06110 PF13419 Haloacid dehalogenase-like hydrolase FE249_06115 PF00132 Bacterial transferase hexapeptide (six repeats) FE249_06115 PF14602 Hexapeptide repeat of succinyl-transferase FE249_06115 PF12804 MobA-like NTP transferase domain FE249_06120 PF01380 SIS domain FE249_06130 PF01695 IstB-like ATP binding protein FE249_06135 PF02796 Helix-turn-helix domain of resolvase FE249_06135 PF00665 Integrase core domain FE249_06145 PF00106 short chain dehydrogenase FE249_06165 PF00795 Carbon-nitrogen hydrolase FE249_06175 PF00486 Transcriptional regulatory protein, C terminal FE249_06175 PF00072 Response regulator receiver domain FE249_06180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_06180 PF00512 His Kinase A (phospho-acceptor) domain FE249_06180 PF18415 Histidine kinase receptor ArcB trans-membrane domain FE249_06180 PF01627 Hpt domain FE249_06180 PF00989 PAS fold FE249_06180 PF00072 Response regulator receiver domain FE249_06185 PF03069 Acetamidase/Formamidase family FE249_06195 PF03824 High-affinity nickel-transport protein FE249_06200 PF04168 A predicted alpha-helical domain with a conserved ER motif. FE249_06200 PF14403 Circularly permuted ATP-grasp type 2 FE249_06205 PF14403 Circularly permuted ATP-grasp type 2 FE249_06215 PF08379 Bacterial transglutaminase-like N-terminal region FE249_06215 PF01841 Transglutaminase-like superfamily FE249_06220 PF00072 Response regulator receiver domain FE249_06220 PF01627 Hpt domain FE249_06220 PF18415 Histidine kinase receptor ArcB trans-membrane domain FE249_06220 PF00512 His Kinase A (phospho-acceptor) domain FE249_06220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_06220 PF00989 PAS fold FE249_06225 PF00486 Transcriptional regulatory protein, C terminal FE249_06225 PF00072 Response regulator receiver domain FE249_06230 PF00005 ABC transporter FE249_06235 PF00005 ABC transporter FE249_06235 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE249_06240 PF02653 Branched-chain amino acid transport system / permease component FE249_06245 PF02653 Branched-chain amino acid transport system / permease component FE249_06255 PF01774 UreD urease accessory protein FE249_06260 PF00547 Urease, gamma subunit FE249_06265 PF00699 Urease beta subunit FE249_06270 PF01979 Amidohydrolase family FE249_06270 PF00449 Urease alpha-subunit, N-terminal domain FE249_06275 PF05194 UreE urease accessory protein, C-terminal domain FE249_06275 PF02814 UreE urease accessory protein, N-terminal domain FE249_06280 PF01730 UreF FE249_06285 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE249_06290 PF02560 Cyanate lyase C-terminal domain FE249_06315 PF01609 Transposase DDE domain FE249_06335 PF00872 Transposase, Mutator family FE249_06370 PF03707 Bacterial signalling protein N terminal repeat FE249_06370 PF00990 Diguanylate cyclase, GGDEF domain FE249_06370 PF00563 EAL domain FE249_06370 PF13188 PAS domain FE249_06385 PF00563 EAL domain FE249_06385 PF00990 Diguanylate cyclase, GGDEF domain FE249_06385 PF03707 Bacterial signalling protein N terminal repeat FE249_06410 PF01739 CheR methyltransferase, SAM binding domain FE249_06410 PF03705 CheR methyltransferase, all-alpha domain FE249_06415 PF01584 CheW-like domain FE249_06420 PF01584 CheW-like domain FE249_06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_06420 PF01627 Hpt domain FE249_06420 PF01627 Hpt domain FE249_06420 PF02895 Signal transducing histidine kinase, homodimeric domain FE249_06420 PF01584 CheW-like domain FE249_06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_06420 PF02895 Signal transducing histidine kinase, homodimeric domain FE249_06425 PF00072 Response regulator receiver domain FE249_06435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_06435 PF00672 HAMP domain FE249_06460 PF02830 V4R domain FE249_06465 PF02310 B12 binding domain FE249_06465 PF04055 Radical SAM superfamily FE249_06470 PF01609 Transposase DDE domain FE249_06490 PF03328 HpcH/HpaI aldolase/citrate lyase family FE249_06495 PF01470 Pyroglutamyl peptidase FE249_06505 PF16177 Acetyl-coenzyme A synthetase N-terminus FE249_06505 PF13193 AMP-binding enzyme C-terminal domain FE249_06505 PF00501 AMP-binding enzyme FE249_06510 PF00390 Malic enzyme, N-terminal domain FE249_06510 PF01515 Phosphate acetyl/butaryl transferase FE249_06510 PF03949 Malic enzyme, NAD binding domain FE249_06520 PF03099 Biotin/lipoate A/B protein ligase family FE249_06535 PF14659 Phage integrase, N-terminal SAM-like domain FE249_06535 PF13356 Arm DNA-binding domain FE249_06535 PF00589 Phage integrase family FE249_06545 PF04962 KduI/IolB family FE249_06550 PF00205 Thiamine pyrophosphate enzyme, central domain FE249_06550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE249_06550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE249_06555 PF00294 pfkB family carbohydrate kinase FE249_06560 PF00005 ABC transporter FE249_06565 PF02653 Branched-chain amino acid transport system / permease component FE249_06580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE249_06580 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE249_06585 PF01261 Xylose isomerase-like TIM barrel FE249_06590 PF00356 Bacterial regulatory proteins, lacI family FE249_06605 PF01261 Xylose isomerase-like TIM barrel FE249_06615 PF03328 HpcH/HpaI aldolase/citrate lyase family FE249_06620 PF01842 ACT domain FE249_06620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE249_06620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE249_06625 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE249_06625 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE249_06630 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FE249_06630 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FE249_06635 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) FE249_06640 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus FE249_06640 PF00361 Proton-conducting membrane transporter FE249_06640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FE249_06645 PF03466 LysR substrate binding domain FE249_06645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_06660 PF04542 Sigma-70 region 2 FE249_06660 PF08281 Sigma-70, region 4 FE249_06690 PF03441 FAD binding domain of DNA photolyase FE249_06690 PF00875 DNA photolyase FE249_06740 PF00005 ABC transporter FE249_06740 PF12848 ABC transporter FE249_06760 PF07690 Major Facilitator Superfamily FE249_06760 PF00083 Sugar (and other) transporter FE249_06765 PF05683 Fumarase C-terminus FE249_06765 PF05681 Fumarate hydratase (Fumerase) FE249_06775 PF02910 Fumarate reductase flavoprotein C-term FE249_06775 PF00890 FAD binding domain FE249_06790 PF13085 2Fe-2S iron-sulfur cluster binding domain FE249_06790 PF13183 4Fe-4S dicluster domain FE249_06795 PF03466 LysR substrate binding domain FE249_06795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_06830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE249_06830 PF00205 Thiamine pyrophosphate enzyme, central domain FE249_06830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE249_06835 PF00392 Bacterial regulatory proteins, gntR family FE249_06835 PF07702 UTRA domain FE249_06840 PF02615 Malate/L-lactate dehydrogenase FE249_06845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE249_06845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE249_06850 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FE249_06855 PF08666 SAF domain FE249_06860 PF00474 Sodium:solute symporter family FE249_06875 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FE249_06880 PF07690 Major Facilitator Superfamily FE249_06890 PF00440 Bacterial regulatory proteins, tetR family FE249_06895 PF05199 GMC oxidoreductase FE249_06895 PF00732 GMC oxidoreductase FE249_06910 PF13195 Protein of unknown function (DUF4011) FE249_06910 PF13087 AAA domain FE249_06910 PF13086 AAA domain FE249_06925 PF00872 Transposase, Mutator family FE249_06945 PF01434 Peptidase family M41 FE249_06945 PF17862 AAA+ lid domain FE249_06945 PF00004 ATPase family associated with various cellular activities (AAA) FE249_06960 PF00176 SNF2 family N-terminal domain FE249_06960 PF00271 Helicase conserved C-terminal domain FE249_06990 PF00145 C-5 cytosine-specific DNA methylase FE249_06995 PF03852 DNA mismatch endonuclease Vsr FE249_07065 PF01370 NAD dependent epimerase/dehydratase family FE249_07070 PF13580 SIS domain FE249_07075 PF00106 short chain dehydrogenase FE249_07080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FE249_07115 PF01475 Ferric uptake regulator family FE249_07120 PF00501 AMP-binding enzyme FE249_07120 PF13193 AMP-binding enzyme C-terminal domain FE249_07130 PF00107 Zinc-binding dehydrogenase FE249_07130 PF08240 Alcohol dehydrogenase GroES-like domain FE249_07135 PF01336 OB-fold nucleic acid binding domain FE249_07135 PF00152 tRNA synthetases class II (D, K and N) FE249_07135 PF02938 GAD domain FE249_07140 PF00570 HRDC domain FE249_07140 PF01612 3'-5' exonuclease FE249_07145 PF00950 ABC 3 transport family FE249_07155 PF00005 ABC transporter FE249_07165 PF00872 Transposase, Mutator family FE249_07180 PF13660 Domain of unknown function (DUF4147) FE249_07180 PF05161 MOFRL family FE249_07195 PF00152 tRNA synthetases class II (D, K and N) FE249_07200 PF12544 Lysine-2,3-aminomutase FE249_07200 PF04055 Radical SAM superfamily FE249_07205 PF01220 Dehydroquinase class II FE249_07210 PF00364 Biotin-requiring enzyme FE249_07215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE249_07215 PF00289 Biotin carboxylase, N-terminal domain FE249_07215 PF02785 Biotin carboxylase C-terminal domain FE249_07225 PF00990 Diguanylate cyclase, GGDEF domain FE249_07225 PF00563 EAL domain FE249_07225 PF03707 Bacterial signalling protein N terminal repeat FE249_07225 PF13188 PAS domain FE249_07230 PF00384 Molybdopterin oxidoreductase FE249_07235 PF00230 Major intrinsic protein FE249_07240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE249_07240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE249_07245 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FE249_07245 PF01266 FAD dependent oxidoreductase FE249_07250 PF08220 DeoR-like helix-turn-helix domain FE249_07250 PF00455 DeoR C terminal sensor domain FE249_07255 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_07260 PF02798 Glutathione S-transferase, N-terminal domain FE249_07265 PF00171 Aldehyde dehydrogenase family FE249_07270 PF00171 Aldehyde dehydrogenase family FE249_07285 PF00120 Glutamine synthetase, catalytic domain FE249_07290 PF00465 Iron-containing alcohol dehydrogenase FE249_07295 PF00990 Diguanylate cyclase, GGDEF domain FE249_07300 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FE249_07300 PF02811 PHP domain FE249_07300 PF14579 Helix-hairpin-helix motif FE249_07300 PF07733 Bacterial DNA polymerase III alpha NTPase domain FE249_07305 PF00108 Thiolase, N-terminal domain FE249_07305 PF02803 Thiolase, C-terminal domain FE249_07315 PF01370 NAD dependent epimerase/dehydratase family FE249_07325 PF01209 ubiE/COQ5 methyltransferase family FE249_07330 PF01425 Amidase FE249_07335 PF17762 HTH domain found in ParB protein FE249_07335 PF02195 ParB-like nuclease domain FE249_07340 PF13614 AAA domain FE249_07345 PF02527 rRNA small subunit methyltransferase G FE249_07350 PF01134 Glucose inhibited division protein A FE249_07350 PF13932 GidA associated domain FE249_07355 PF12631 MnmE helical domain FE249_07355 PF01926 50S ribosome-binding GTPase FE249_07355 PF10396 GTP-binding protein TrmE N-terminus FE249_07365 PF03190 Protein of unknown function, DUF255 FE249_07370 PF10609 NUBPL iron-transfer P-loop NTPase FE249_07390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_07390 PF03466 LysR substrate binding domain FE249_07395 PF00953 Glycosyl transferase family 4 FE249_07400 PF00892 EamA-like transporter family FE249_07440 PF08751 TrwC relaxase FE249_07440 PF18340 DNA relaxase TraI 2B/2B-like domain FE249_07440 PF07057 DNA helicase TraI FE249_07440 PF18272 single-stranded DNA binding TraI N-terminal subdomain FE249_07450 PF00239 Resolvase, N terminal domain FE249_07450 PF07508 Recombinase FE249_07450 PF13408 Recombinase zinc beta ribbon domain FE249_07470 PF12728 Helix-turn-helix domain FE249_07480 PF13356 Arm DNA-binding domain FE249_07480 PF00589 Phage integrase family FE249_07490 PF17042 Nucleotide-binding C-terminal domain FE249_07490 PF07005 Sugar-binding N-terminal domain FE249_07495 PF01261 Xylose isomerase-like TIM barrel FE249_07500 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE249_07500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE249_07505 PF00356 Bacterial regulatory proteins, lacI family FE249_07505 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FE249_07510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE249_07510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE249_07515 PF00596 Class II Aldolase and Adducin N-terminal domain FE249_07530 PF07690 Major Facilitator Superfamily FE249_07545 PF05145 Transition state regulatory protein AbrB FE249_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_07550 PF03466 LysR substrate binding domain FE249_07555 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_07560 PF01037 Lrp/AsnC ligand binding domain FE249_07570 PF07244 Surface antigen variable number repeat FE249_07570 PF01103 Surface antigen FE249_07580 PF00132 Bacterial transferase hexapeptide (six repeats) FE249_07580 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FE249_07585 PF07977 FabA-like domain FE249_07590 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FE249_07590 PF00132 Bacterial transferase hexapeptide (six repeats) FE249_07595 PF06230 LpxI C-terminal domain FE249_07595 PF17930 LpxI N-terminal domain FE249_07600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE249_07605 PF13181 Tetratricopeptide repeat FE249_07620 PF02371 Transposase IS116/IS110/IS902 family FE249_07620 PF01548 Transposase FE249_07660 PF12848 ABC transporter FE249_07660 PF00005 ABC transporter FE249_07670 PF02558 Ketopantoate reductase PanE/ApbA FE249_07670 PF08546 Ketopantoate reductase PanE/ApbA C terminal FE249_07675 PF00501 AMP-binding enzyme FE249_07675 PF13193 AMP-binding enzyme C-terminal domain FE249_07685 PF00403 Heavy-metal-associated domain FE249_07690 PF00403 Heavy-metal-associated domain FE249_07705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE249_07705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE249_07710 PF00920 Dehydratase family FE249_07720 PF03653 Uncharacterised protein family (UPF0093) FE249_07730 PF00762 Ferrochelatase FE249_07735 PF01208 Uroporphyrinogen decarboxylase (URO-D) FE249_07740 PF03618 Kinase/pyrophosphorylase FE249_07745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FE249_07745 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FE249_07750 PF08240 Alcohol dehydrogenase GroES-like domain FE249_07750 PF00107 Zinc-binding dehydrogenase FE249_07765 PF02152 Dihydroneopterin aldolase FE249_07775 PF10397 Adenylosuccinate lyase C-terminus FE249_07775 PF00206 Lyase FE249_07780 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FE249_07805 PF00719 Inorganic pyrophosphatase FE249_07810 PF01370 NAD dependent epimerase/dehydratase family FE249_07815 PF09335 SNARE associated Golgi protein FE249_07835 PF01812 5-formyltetrahydrofolate cyclo-ligase family FE249_07840 PF00155 Aminotransferase class I and II FE249_07850 PF00448 SRP54-type protein, GTPase domain FE249_07850 PF02881 SRP54-type protein, helical bundle domain FE249_07855 PF04055 Radical SAM superfamily FE249_07855 PF00919 Uncharacterized protein family UPF0004 FE249_07860 PF01678 Diaminopimelate epimerase FE249_07870 PF10576 Iron-sulfur binding domain of endonuclease III FE249_07870 PF00633 Helix-hairpin-helix motif FE249_07870 PF00730 HhH-GPD superfamily base excision DNA repair protein FE249_07880 PF07690 Major Facilitator Superfamily FE249_07885 PF00118 TCP-1/cpn60 chaperonin family FE249_07890 PF00166 Chaperonin 10 Kd subunit FE249_07895 PF06233 Usg-like family FE249_08045 PF02503 Polyphosphate kinase middle domain FE249_08045 PF13090 Polyphosphate kinase C-terminal domain 2 FE249_08045 PF13089 Polyphosphate kinase N-terminal domain FE249_08045 PF17941 Polyphosphate kinase C-terminal domain 1 FE249_08060 PF02769 AIR synthase related protein, C-terminal domain FE249_08060 PF00586 AIR synthase related protein, N-terminal domain FE249_08065 PF00551 Formyl transferase FE249_08075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FE249_08075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FE249_08080 PF00202 Aminotransferase class-III FE249_08085 PF02541 Ppx/GppA phosphatase family FE249_08100 PF02617 ATP-dependent Clp protease adaptor protein ClpS FE249_08105 PF00004 ATPase family associated with various cellular activities (AAA) FE249_08105 PF07724 AAA domain (Cdc48 subfamily) FE249_08105 PF17871 AAA lid domain FE249_08105 PF02861 Clp amino terminal domain, pathogenicity island component FE249_08105 PF10431 C-terminal, D2-small domain, of ClpB protein FE249_08115 PF13183 4Fe-4S dicluster domain FE249_08115 PF02754 Cysteine-rich domain FE249_08120 PF01565 FAD binding domain FE249_08125 PF01565 FAD binding domain FE249_08125 PF02913 FAD linked oxidases, C-terminal domain FE249_08130 PF00444 Ribosomal protein L36 FE249_08140 PF01063 Amino-transferase class IV FE249_08145 PF00696 Amino acid kinase family FE249_08150 PF01765 Ribosome recycling factor FE249_08155 PF01255 Putative undecaprenyl diphosphate synthase FE249_08165 PF13288 DXP reductoisomerase C-terminal domain FE249_08165 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FE249_08165 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FE249_08170 PF02163 Peptidase family M50 FE249_08170 PF17820 PDZ domain FE249_08175 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FE249_08175 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FE249_08180 PF00291 Pyridoxal-phosphate dependent enzyme FE249_08185 PF09335 SNARE associated Golgi protein FE249_08200 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE249_08205 PF04198 Putative sugar-binding domain FE249_08210 PF01547 Bacterial extracellular solute-binding protein FE249_08215 PF00528 Binding-protein-dependent transport system inner membrane component FE249_08220 PF00528 Binding-protein-dependent transport system inner membrane component FE249_08225 PF00005 ABC transporter FE249_08225 PF08402 TOBE domain FE249_08230 PF00005 ABC transporter FE249_08230 PF08402 TOBE domain FE249_08235 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE249_08235 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE249_08240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE249_08240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE249_08245 PF00596 Class II Aldolase and Adducin N-terminal domain FE249_08250 PF01266 FAD dependent oxidoreductase FE249_08250 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FE249_08260 PF03458 UPF0126 domain FE249_08265 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_08265 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_08265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_08270 PF02515 CoA-transferase family III FE249_08280 PF01575 MaoC like domain FE249_08285 PF00106 short chain dehydrogenase FE249_08320 PF02954 Bacterial regulatory protein, Fis family FE249_08320 PF00072 Response regulator receiver domain FE249_08320 PF00158 Sigma-54 interaction domain FE249_08330 PF00672 HAMP domain FE249_08330 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_08335 PF08450 SMP-30/Gluconolactonase/LRE-like region FE249_08340 PF02653 Branched-chain amino acid transport system / permease component FE249_08345 PF02653 Branched-chain amino acid transport system / permease component FE249_08350 PF00005 ABC transporter FE249_08360 PF08450 SMP-30/Gluconolactonase/LRE-like region FE249_08365 PF01081 KDPG and KHG aldolase FE249_08370 PF05035 2-keto-3-deoxy-galactonokinase FE249_08380 PF00005 ABC transporter FE249_08385 PF02653 Branched-chain amino acid transport system / permease component FE249_08405 PF13407 Periplasmic binding protein domain FE249_08410 PF02653 Branched-chain amino acid transport system / permease component FE249_08415 PF00005 ABC transporter FE249_08420 PF05138 Phenylacetic acid catabolic protein FE249_08425 PF06243 Phenylacetic acid degradation B FE249_08430 PF05138 Phenylacetic acid catabolic protein FE249_08435 PF01883 Iron-sulfur cluster assembly protein FE249_08440 PF00970 Oxidoreductase FAD-binding domain FE249_08440 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_08440 PF00175 Oxidoreductase NAD-binding domain FE249_08460 PF02733 Dak1 domain FE249_08465 PF02734 DAK2 domain FE249_08470 PF00391 PEP-utilising enzyme, mobile domain FE249_08470 PF05524 PEP-utilising enzyme, N-terminal FE249_08470 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FE249_08470 PF02896 PEP-utilising enzyme, TIM barrel domain FE249_08470 PF00381 PTS HPr component phosphorylation site FE249_08480 PF01078 Magnesium chelatase, subunit ChlI FE249_08480 PF13335 Magnesium chelatase, subunit ChlI C-terminal FE249_08485 PF04002 RadC-like JAB domain FE249_08490 PF01042 Endoribonuclease L-PSP FE249_08500 PF00398 Ribosomal RNA adenine dimethylase FE249_08505 PF00639 PPIC-type PPIASE domain FE249_08505 PF09312 SurA N-terminal domain FE249_08525 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FE249_08530 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FE249_08535 PF01613 Flavin reductase like domain FE249_08540 PF00011 Hsp20/alpha crystallin family FE249_08545 PF01197 Ribosomal protein L31 FE249_08555 PF00730 HhH-GPD superfamily base excision DNA repair protein FE249_08575 PF00270 DEAD/DEAH box helicase FE249_08575 PF00271 Helicase conserved C-terminal domain FE249_08580 PF01590 GAF domain FE249_08580 PF02954 Bacterial regulatory protein, Fis family FE249_08580 PF00158 Sigma-54 interaction domain FE249_08585 PF08240 Alcohol dehydrogenase GroES-like domain FE249_08585 PF00107 Zinc-binding dehydrogenase FE249_08600 PF04976 DMSO reductase anchor subunit (DmsC) FE249_08605 PF13247 4Fe-4S dicluster domain FE249_08605 PF12800 4Fe-4S binding domain FE249_08610 PF01568 Molydopterin dinucleotide binding domain FE249_08610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE249_08610 PF00384 Molybdopterin oxidoreductase FE249_08615 PF00282 Pyridoxal-dependent decarboxylase conserved domain FE249_08620 PF00873 AcrB/AcrD/AcrF family FE249_08625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE249_08630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE249_08630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE249_08630 PF01842 ACT domain FE249_08640 PF01728 FtsJ-like methyltransferase FE249_08640 PF01479 S4 domain FE249_08645 PF01381 Helix-turn-helix FE249_08650 PF01189 16S rRNA methyltransferase RsmB/F FE249_08650 PF01029 NusB family FE249_08660 PF02325 YGGT family FE249_08665 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FE249_08665 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FE249_08680 PF00248 Aldo/keto reductase family FE249_08685 PF01227 GTP cyclohydrolase I FE249_08690 PF04379 ApaG domain FE249_08700 PF08544 GHMP kinases C terminal FE249_08700 PF00288 GHMP kinases N terminal domain FE249_08710 PF02769 AIR synthase related protein, C-terminal domain FE249_08710 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FE249_08710 PF00586 AIR synthase related protein, N-terminal domain FE249_08715 PF01722 BolA-like protein FE249_08720 PF00462 Glutaredoxin FE249_08730 PF02436 Conserved carboxylase domain FE249_08730 PF02785 Biotin carboxylase C-terminal domain FE249_08730 PF00289 Biotin carboxylase, N-terminal domain FE249_08730 PF00364 Biotin-requiring enzyme FE249_08730 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE249_08730 PF00682 HMGL-like FE249_08735 PF01593 Flavin containing amine oxidoreductase FE249_08740 PF01914 MarC family integral membrane protein FE249_08765 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE249_08770 PF07690 Major Facilitator Superfamily FE249_08775 PF02742 Iron dependent repressor, metal binding and dimerisation domain FE249_08775 PF01325 Iron dependent repressor, N-terminal DNA binding domain FE249_08785 PF01594 AI-2E family transporter FE249_08790 PF00708 Acylphosphatase FE249_08820 PF01066 CDP-alcohol phosphatidyltransferase FE249_08825 PF02666 Phosphatidylserine decarboxylase FE249_08835 PF03641 Possible lysine decarboxylase FE249_08840 PF03884 DNA gyrase inhibitor YacG FE249_08845 PF12111 Polyribonucleotide phosphorylase C terminal FE249_08845 PF10150 Ribonuclease E/G family FE249_08845 PF00575 S1 RNA binding domain FE249_08850 PF02545 Maf-like protein FE249_08855 PF01176 Translation initiation factor 1A / IF-1 FE249_08860 PF00815 Histidinol dehydrogenase FE249_08865 PF01634 ATP phosphoribosyltransferase FE249_08870 PF00682 HMGL-like FE249_08875 PF02515 CoA-transferase family III FE249_08880 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE249_08880 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE249_08900 PF04055 Radical SAM superfamily FE249_08910 PF00830 Ribosomal L28 family FE249_08920 PF14748 Pyrroline-5-carboxylate reductase dimerisation FE249_08920 PF03807 NADP oxidoreductase coenzyme F420-dependent FE249_08925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_08925 PF00672 HAMP domain FE249_08935 PF00072 Response regulator receiver domain FE249_08940 PF01627 Hpt domain FE249_08940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_08940 PF02895 Signal transducing histidine kinase, homodimeric domain FE249_08940 PF01584 CheW-like domain FE249_08945 PF01584 CheW-like domain FE249_08950 PF01739 CheR methyltransferase, SAM binding domain FE249_08950 PF03705 CheR methyltransferase, all-alpha domain FE249_08955 PF01339 CheB methylesterase FE249_08955 PF00072 Response regulator receiver domain FE249_08960 PF00072 Response regulator receiver domain FE249_08965 PF03975 CheD chemotactic sensory transduction FE249_08990 PF04545 Sigma-70, region 4 FE249_08990 PF00140 Sigma-70 factor, region 1.2 FE249_08990 PF04542 Sigma-70 region 2 FE249_08995 PF00849 RNA pseudouridylate synthase FE249_09030 PF00083 Sugar (and other) transporter FE249_09040 PF01425 Amidase FE249_09045 PF02785 Biotin carboxylase C-terminal domain FE249_09045 PF00289 Biotin carboxylase, N-terminal domain FE249_09045 PF00364 Biotin-requiring enzyme FE249_09045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE249_09050 PF09347 Domain of unknown function (DUF1989) FE249_09060 PF00005 ABC transporter FE249_09080 PF07995 Glucose / Sorbosone dehydrogenase FE249_09085 PF00873 AcrB/AcrD/AcrF family FE249_09100 PF00701 Dihydrodipicolinate synthetase family FE249_09110 PF01255 Putative undecaprenyl diphosphate synthase FE249_09115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_09115 PF03466 LysR substrate binding domain FE249_09130 PF00528 Binding-protein-dependent transport system inner membrane component FE249_09135 PF00005 ABC transporter FE249_09140 PF00206 Lyase FE249_09140 PF10397 Adenylosuccinate lyase C-terminus FE249_09145 PF00156 Phosphoribosyl transferase domain FE249_09150 PF01588 Putative tRNA binding domain FE249_09170 PF03764 Elongation factor G, domain IV FE249_09170 PF00679 Elongation factor G C-terminus FE249_09170 PF14492 Elongation Factor G, domain II FE249_09170 PF00009 Elongation factor Tu GTP binding domain FE249_09215 PF01121 Dephospho-CoA kinase FE249_09220 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FE249_09220 PF01488 Shikimate / quinate 5-dehydrogenase FE249_09220 PF08501 Shikimate dehydrogenase substrate binding domain FE249_09230 PF01323 DSBA-like thioredoxin domain FE249_09235 PF00551 Formyl transferase FE249_09240 PF00929 Exonuclease FE249_09245 PF00326 Prolyl oligopeptidase family FE249_09245 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FE249_09250 PF01268 Formate--tetrahydrofolate ligase FE249_09260 PF00491 Arginase family FE249_09270 PF01425 Amidase FE249_09280 PF01810 LysE type translocator FE249_09285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_09285 PF03466 LysR substrate binding domain FE249_09295 PF00248 Aldo/keto reductase family FE249_09300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_09300 PF03466 LysR substrate binding domain FE249_09305 PF05853 beta-keto acid cleavage enzyme FE249_09310 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE249_09310 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE249_09320 PF00005 ABC transporter FE249_09330 PF02653 Branched-chain amino acid transport system / permease component FE249_09335 PF00709 Adenylosuccinate synthetase FE249_09340 PF13393 Histidyl-tRNA synthetase FE249_09345 PF03062 MBOAT, membrane-bound O-acyltransferase family FE249_09360 PF00158 Sigma-54 interaction domain FE249_09360 PF02954 Bacterial regulatory protein, Fis family FE249_09360 PF01590 GAF domain FE249_09365 PF13360 PQQ-like domain FE249_09375 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE249_09380 PF04828 Glutathione-dependent formaldehyde-activating enzyme FE249_09385 PF08240 Alcohol dehydrogenase GroES-like domain FE249_09385 PF00107 Zinc-binding dehydrogenase FE249_09390 PF07715 TonB-dependent Receptor Plug Domain FE249_09390 PF00593 TonB dependent receptor FE249_09395 PF01565 FAD binding domain FE249_09395 PF02913 FAD linked oxidases, C-terminal domain FE249_09400 PF13360 PQQ-like domain FE249_09400 PF01011 PQQ enzyme repeat FE249_09400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE249_09410 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FE249_09410 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FE249_09415 PF01507 Phosphoadenosine phosphosulfate reductase family FE249_09420 PF00258 Flavodoxin FE249_09420 PF00175 Oxidoreductase NAD-binding domain FE249_09420 PF00667 FAD binding domain FE249_09425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FE249_09430 PF14824 Sirohaem biosynthesis protein central FE249_09430 PF10414 Sirohaem synthase dimerisation region FE249_09430 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FE249_09435 PF01037 Lrp/AsnC ligand binding domain FE249_09435 PF13404 AsnC-type helix-turn-helix domain FE249_09440 PF00994 Probable molybdopterin binding domain FE249_09470 PF00563 EAL domain FE249_09470 PF01590 GAF domain FE249_09470 PF00990 Diguanylate cyclase, GGDEF domain FE249_09470 PF00989 PAS fold FE249_09480 PF03960 ArsC family FE249_09485 PF02040 Arsenical pump membrane protein FE249_09495 PF00486 Transcriptional regulatory protein, C terminal FE249_09495 PF00072 Response regulator receiver domain FE249_09500 PF00925 GTP cyclohydrolase II FE249_09520 PF00676 Dehydrogenase E1 component FE249_09525 PF00364 Biotin-requiring enzyme FE249_09525 PF02779 Transketolase, pyrimidine binding domain FE249_09525 PF02780 Transketolase, C-terminal domain FE249_09530 PF02817 e3 binding domain FE249_09530 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FE249_09530 PF00364 Biotin-requiring enzyme FE249_09540 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_09540 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE249_09545 PF04055 Radical SAM superfamily FE249_09550 PF03364 Polyketide cyclase / dehydrase and lipid transport FE249_09555 PF01212 Beta-eliminating lyase FE249_09560 PF03150 Di-haem cytochrome c peroxidase FE249_09560 PF00034 Cytochrome c FE249_09565 PF03358 NADPH-dependent FMN reductase FE249_09570 PF00248 Aldo/keto reductase family FE249_09575 PF03466 LysR substrate binding domain FE249_09575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_09585 PF10369 Small subunit of acetolactate synthase FE249_09590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE249_09590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE249_09590 PF00205 Thiamine pyrophosphate enzyme, central domain FE249_09605 PF13380 CoA binding domain FE249_09615 PF00768 D-alanyl-D-alanine carboxypeptidase FE249_09615 PF07943 Penicillin-binding protein 5, C-terminal domain FE249_09625 PF02617 ATP-dependent Clp protease adaptor protein ClpS FE249_09635 PF00313 'Cold-shock' DNA-binding domain FE249_09645 PF00817 impB/mucB/samB family FE249_09645 PF11799 impB/mucB/samB family C-terminal domain FE249_09670 PF00561 alpha/beta hydrolase fold FE249_09685 PF01578 Cytochrome C assembly protein FE249_09695 PF03100 CcmE FE249_09700 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FE249_09700 PF01578 Cytochrome C assembly protein FE249_09705 PF08534 Redoxin FE249_09710 PF03918 Cytochrome C biogenesis protein FE249_09720 PF07896 Protein of unknown function (DUF1674) FE249_09725 PF00654 Voltage gated chloride channel FE249_09730 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE249_09730 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE249_09740 PF00691 OmpA family FE249_09740 PF01389 OmpA-like transmembrane domain FE249_09745 PF00270 DEAD/DEAH box helicase FE249_09745 PF04408 Helicase associated domain (HA2) FE249_09745 PF08482 ATP-dependent helicase C-terminal FE249_09745 PF00271 Helicase conserved C-terminal domain FE249_09750 PF02683 Cytochrome C biogenesis protein transmembrane region FE249_09750 PF11412 Disulphide bond corrector protein DsbC FE249_09760 PF00034 Cytochrome c FE249_09770 PF14765 Polyketide synthase dehydratase FE249_09770 PF08659 KR domain FE249_09770 PF02801 Beta-ketoacyl synthase, C-terminal domain FE249_09770 PF00109 Beta-ketoacyl synthase, N-terminal domain FE249_09770 PF16197 Ketoacyl-synthetase C-terminal extension FE249_09770 PF08240 Alcohol dehydrogenase GroES-like domain FE249_09770 PF00698 Acyl transferase domain FE249_09770 PF00550 Phosphopantetheine attachment site FE249_09780 PF00005 ABC transporter FE249_09785 PF02405 Permease MlaE FE249_09790 PF01168 Alanine racemase, N-terminal domain FE249_09790 PF00842 Alanine racemase, C-terminal domain FE249_09800 PF03796 DnaB-like helicase C terminal domain FE249_09800 PF00772 DnaB-like helicase N terminal domain FE249_09820 PF00294 pfkB family carbohydrate kinase FE249_09825 PF00909 Ammonium Transporter Family FE249_09835 PF00571 CBS domain FE249_09835 PF00478 IMP dehydrogenase / GMP reductase domain FE249_09840 PF08543 Phosphomethylpyrimidine kinase FE249_09845 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE249_09850 PF00717 Peptidase S24-like FE249_09850 PF01726 LexA DNA binding domain FE249_09860 PF01510 N-acetylmuramoyl-L-alanine amidase FE249_09870 PF00204 DNA gyrase B FE249_09870 PF00986 DNA gyrase B subunit, carboxyl terminus FE249_09870 PF01751 Toprim domain FE249_09870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_09875 PF03466 LysR substrate binding domain FE249_09875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_09880 PF03547 Membrane transport protein FE249_09885 PF00563 EAL domain FE249_09885 PF12792 CSS motif domain associated with EAL FE249_09915 PF02589 LUD domain FE249_09920 PF11870 Domain of unknown function (DUF3390) FE249_09920 PF13183 4Fe-4S dicluster domain FE249_09920 PF02589 LUD domain FE249_09930 PF07676 WD40-like Beta Propeller Repeat FE249_09930 PF04052 TolB amino-terminal domain FE249_09940 PF02472 Biopolymer transport protein ExbD/TolR FE249_09945 PF01618 MotA/TolQ/ExbB proton channel family FE249_09950 PF03061 Thioesterase superfamily FE249_09955 PF05491 RuvB C-terminal winged helix domain FE249_09955 PF17864 RuvB AAA lid domain FE249_09955 PF05496 Holliday junction DNA helicase RuvB P-loop domain FE249_09960 PF07499 RuvA, C-terminal domain FE249_09960 PF01330 RuvA N terminal domain FE249_09965 PF02075 Crossover junction endodeoxyribonuclease RuvC FE249_09970 PF01709 Transcriptional regulator FE249_09985 PF07690 Major Facilitator Superfamily FE249_09995 PF06754 Phosphonate metabolism protein PhnG FE249_10005 PF05861 Bacterial phosphonate metabolism protein (PhnI) FE249_10010 PF06007 Phosphonate metabolism protein PhnJ FE249_10015 PF00005 ABC transporter FE249_10020 PF00005 ABC transporter FE249_10025 PF07969 Amidohydrolase family FE249_10040 PF07702 UTRA domain FE249_10040 PF00392 Bacterial regulatory proteins, gntR family FE249_10045 PF00535 Glycosyl transferase family 2 FE249_10050 PF01632 Ribosomal protein L35 FE249_10055 PF00453 Ribosomal protein L20 FE249_10060 PF13439 Glycosyltransferase Family 4 FE249_10060 PF00534 Glycosyl transferases group 1 FE249_10075 PF16884 N-terminal domain of oxidoreductase FE249_10075 PF00107 Zinc-binding dehydrogenase FE249_10080 PF12399 Branched-chain amino acid ATP-binding cassette transporter FE249_10080 PF00005 ABC transporter FE249_10085 PF00005 ABC transporter FE249_10095 PF02653 Branched-chain amino acid transport system / permease component FE249_10105 PF01425 Amidase FE249_10110 PF00128 Alpha amylase, catalytic domain FE249_10110 PF11896 Domain of unknown function (DUF3416) FE249_10115 PF16657 Maltogenic Amylase, C-terminal domain FE249_10115 PF00128 Alpha amylase, catalytic domain FE249_10120 PF00128 Alpha amylase, catalytic domain FE249_10120 PF02806 Alpha amylase, C-terminal all-beta domain FE249_10120 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FE249_10125 PF00128 Alpha amylase, catalytic domain FE249_10125 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FE249_10130 PF02446 4-alpha-glucanotransferase FE249_10160 PF01218 Coproporphyrinogen III oxidase FE249_10170 PF00033 Cytochrome b/b6/petB FE249_10170 PF00032 Cytochrome b(C-terminal)/b6/petD FE249_10180 PF01048 Phosphorylase superfamily FE249_10185 PF10417 C-terminal domain of 1-Cys peroxiredoxin FE249_10185 PF00578 AhpC/TSA family FE249_10190 PF00005 ABC transporter FE249_10195 PF01895 PhoU domain FE249_10200 PF00072 Response regulator receiver domain FE249_10200 PF00486 Transcriptional regulatory protein, C terminal FE249_10210 PF00474 Sodium:solute symporter family FE249_10225 PF02397 Bacterial sugar transferase FE249_10235 PF02954 Bacterial regulatory protein, Fis family FE249_10235 PF00072 Response regulator receiver domain FE249_10235 PF00158 Sigma-54 interaction domain FE249_10255 PF13439 Glycosyltransferase Family 4 FE249_10255 PF00534 Glycosyl transferases group 1 FE249_10270 PF13614 AAA domain FE249_10270 PF13807 G-rich domain on putative tyrosine kinase FE249_10270 PF02706 Chain length determinant protein FE249_10280 PF01471 Putative peptidoglycan binding domain FE249_10280 PF13401 AAA domain FE249_10320 PF00158 Sigma-54 interaction domain FE249_10320 PF01590 GAF domain FE249_10320 PF02954 Bacterial regulatory protein, Fis family FE249_10325 PF08240 Alcohol dehydrogenase GroES-like domain FE249_10325 PF00107 Zinc-binding dehydrogenase FE249_10330 PF00743 Flavin-binding monooxygenase-like FE249_10350 PF05336 L-rhamnose mutarotase FE249_10355 PF02653 Branched-chain amino acid transport system / permease component FE249_10360 PF02653 Branched-chain amino acid transport system / permease component FE249_10365 PF00005 ABC transporter FE249_10370 PF13407 Periplasmic binding protein domain FE249_10380 PF01261 Xylose isomerase-like TIM barrel FE249_10385 PF00596 Class II Aldolase and Adducin N-terminal domain FE249_10390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE249_10390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE249_10395 PF17200 Single Cache domain 2 FE249_10395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_10395 PF00672 HAMP domain FE249_10395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_10395 PF17200 Single Cache domain 2 FE249_10395 PF00672 HAMP domain FE249_10405 PF00226 DnaJ domain FE249_10405 PF00684 DnaJ central domain FE249_10405 PF01556 DnaJ C terminal domain FE249_10415 PF00174 Oxidoreductase molybdopterin binding domain FE249_10420 PF01292 Prokaryotic cytochrome b561 FE249_10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_10435 PF03466 LysR substrate binding domain FE249_10445 PF00005 ABC transporter FE249_10445 PF17912 MalK OB fold domain FE249_10450 PF00528 Binding-protein-dependent transport system inner membrane component FE249_10455 PF00528 Binding-protein-dependent transport system inner membrane component FE249_10460 PF13416 Bacterial extracellular solute-binding protein FE249_10465 PF00561 alpha/beta hydrolase fold FE249_10470 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_10470 PF00034 Cytochrome c FE249_10470 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE249_10475 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_10475 PF01799 [2Fe-2S] binding domain FE249_10485 PF00583 Acetyltransferase (GNAT) family FE249_10490 PF00202 Aminotransferase class-III FE249_10495 PF06339 Ectoine synthase FE249_10500 PF05721 Phytanoyl-CoA dioxygenase (PhyH) FE249_10505 PF13840 ACT domain FE249_10505 PF00696 Amino acid kinase family FE249_10510 PF07690 Major Facilitator Superfamily FE249_10525 PF00005 ABC transporter FE249_10530 PF02405 Permease MlaE FE249_10535 PF03741 Integral membrane protein TerC family FE249_10540 PF00206 Lyase FE249_10540 PF10397 Adenylosuccinate lyase C-terminus FE249_10550 PF00171 Aldehyde dehydrogenase family FE249_10555 PF01546 Peptidase family M20/M25/M40 FE249_10555 PF07687 Peptidase dimerisation domain FE249_10565 PF00743 Flavin-binding monooxygenase-like FE249_10580 PF00403 Heavy-metal-associated domain FE249_10595 PF00561 alpha/beta hydrolase fold FE249_10595 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FE249_10600 PF01515 Phosphate acetyl/butaryl transferase FE249_10605 PF02627 Carboxymuconolactone decarboxylase family FE249_10635 PF00440 Bacterial regulatory proteins, tetR family FE249_10640 PF00596 Class II Aldolase and Adducin N-terminal domain FE249_10645 PF07298 NnrU protein FE249_10650 PF00174 Oxidoreductase molybdopterin binding domain FE249_10685 PF02872 5'-nucleotidase, C-terminal domain FE249_10685 PF00149 Calcineurin-like phosphoesterase FE249_10695 PF01925 Sulfite exporter TauE/SafE FE249_10715 PF04185 Phosphoesterase family FE249_10720 PF00871 Acetokinase family FE249_10725 PF00211 Adenylate and Guanylate cyclase catalytic domain FE249_10730 PF00120 Glutamine synthetase, catalytic domain FE249_10730 PF03951 Glutamine synthetase, beta-Grasp domain FE249_10735 PF00543 Nitrogen regulatory protein P-II FE249_10740 PF00155 Aminotransferase class I and II FE249_10745 PF00795 Carbon-nitrogen hydrolase FE249_10750 PF01513 ATP-NAD kinase FE249_10755 PF04229 GrpB protein FE249_10760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FE249_10760 PF00056 lactate/malate dehydrogenase, NAD binding domain FE249_10775 PF03466 LysR substrate binding domain FE249_10775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_10785 PF07724 AAA domain (Cdc48 subfamily) FE249_10785 PF17871 AAA lid domain FE249_10785 PF10431 C-terminal, D2-small domain, of ClpB protein FE249_10785 PF00004 ATPase family associated with various cellular activities (AAA) FE249_10790 PF06812 ImpA, N-terminal, type VI secretion system FE249_10795 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FE249_10800 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath FE249_10805 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 FE249_10820 PF05947 Type VI secretion system, TssF FE249_10860 PF00005 ABC transporter FE249_10875 PF00183 Hsp90 protein FE249_10885 PF01479 S4 domain FE249_10890 PF11953 Domain of unknown function (DUF3470) FE249_10890 PF00037 4Fe-4S binding domain FE249_10900 PF01566 Natural resistance-associated macrophage protein FE249_10905 PF00005 ABC transporter FE249_10910 PF11862 Domain of unknown function (DUF3382) FE249_10910 PF02653 Branched-chain amino acid transport system / permease component FE249_10915 PF02653 Branched-chain amino acid transport system / permease component FE249_10925 PF00593 TonB dependent receptor FE249_10925 PF07715 TonB-dependent Receptor Plug Domain FE249_10935 PF13417 Glutathione S-transferase, N-terminal domain FE249_10945 PF00440 Bacterial regulatory proteins, tetR family FE249_10955 PF01053 Cys/Met metabolism PLP-dependent enzyme FE249_10960 PF01649 Ribosomal protein S20 FE249_10965 PF11638 DnaA N-terminal domain FE249_10965 PF00308 Bacterial dnaA protein FE249_10965 PF08299 Bacterial dnaA protein helix-turn-helix FE249_10970 PF00756 Putative esterase FE249_10975 PF00313 'Cold-shock' DNA-binding domain FE249_10985 PF00872 Transposase, Mutator family FE249_10995 PF02803 Thiolase, C-terminal domain FE249_10995 PF00108 Thiolase, N-terminal domain FE249_11000 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FE249_11000 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FE249_11000 PF00378 Enoyl-CoA hydratase/isomerase FE249_11005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_11005 PF12806 Acetyl-CoA dehydrogenase C-terminal like FE249_11005 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_11005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_11015 PF00528 Binding-protein-dependent transport system inner membrane component FE249_11025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_11025 PF03459 TOBE domain FE249_11030 PF03073 TspO/MBR family FE249_11045 PF02416 mttA/Hcf106 family FE249_11050 PF02416 mttA/Hcf106 family FE249_11055 PF00596 Class II Aldolase and Adducin N-terminal domain FE249_11060 PF03079 ARD/ARD' family FE249_11070 PF00795 Carbon-nitrogen hydrolase FE249_11075 PF01381 Helix-turn-helix FE249_11080 PF00834 Ribulose-phosphate 3 epimerase family FE249_11090 PF16363 GDP-mannose 4,6 dehydratase FE249_11095 PF13439 Glycosyltransferase Family 4 FE249_11095 PF00534 Glycosyl transferases group 1 FE249_11100 PF05981 CreA protein FE249_11105 PF01808 AICARFT/IMPCHase bienzyme FE249_11105 PF02142 MGS-like domain FE249_11115 PF00986 DNA gyrase B subunit, carboxyl terminus FE249_11115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_11115 PF01751 Toprim domain FE249_11115 PF00204 DNA gyrase B FE249_11120 PF02224 Cytidylate kinase FE249_11125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FE249_11140 PF02515 CoA-transferase family III FE249_11155 PF00773 RNB domain FE249_11155 PF00575 S1 RNA binding domain FE249_11155 PF08206 Ribonuclease B OB domain FE249_11155 PF17876 Cold shock domain FE249_11155 PF08461 Ribonuclease R winged-helix domain FE249_11160 PF13180 PDZ domain FE249_11160 PF03572 Peptidase family S41 FE249_11165 PF00471 Ribosomal protein L33 FE249_11170 PF02684 Lipid-A-disaccharide synthetase FE249_11175 PF00795 Carbon-nitrogen hydrolase FE249_11185 PF00034 Cytochrome c FE249_11185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE249_11185 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_11195 PF14659 Phage integrase, N-terminal SAM-like domain FE249_11195 PF00589 Phage integrase family FE249_11240 PF00155 Aminotransferase class I and II FE249_11245 PF02511 Thymidylate synthase complementing protein FE249_11260 PF13614 AAA domain FE249_11265 PF03853 YjeF-related protein N-terminus FE249_11265 PF01256 Carbohydrate kinase FE249_11270 PF08669 Glycine cleavage T-protein C-terminal barrel domain FE249_11270 PF01571 Aminomethyltransferase folate-binding domain FE249_11275 PF01597 Glycine cleavage H-protein FE249_11280 PF02347 Glycine cleavage system P-protein FE249_11290 PF01343 Peptidase family S49 FE249_11295 PF02381 MraZ protein, putative antitoxin-like FE249_11300 PF01795 MraW methylase family FE249_11310 PF03717 Penicillin-binding Protein dimerisation domain FE249_11310 PF00905 Penicillin binding protein transpeptidase domain FE249_11315 PF08245 Mur ligase middle domain FE249_11315 PF02875 Mur ligase family, glutamate ligase domain FE249_11315 PF01225 Mur ligase family, catalytic domain FE249_11320 PF01225 Mur ligase family, catalytic domain FE249_11320 PF02875 Mur ligase family, glutamate ligase domain FE249_11320 PF08245 Mur ligase middle domain FE249_11325 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FE249_11325 PF00953 Glycosyl transferase family 4 FE249_11330 PF02875 Mur ligase family, glutamate ligase domain FE249_11330 PF08245 Mur ligase middle domain FE249_11335 PF01098 Cell cycle protein FE249_11340 PF03033 Glycosyltransferase family 28 N-terminal domain FE249_11340 PF04101 Glycosyltransferase family 28 C-terminal domain FE249_11345 PF02875 Mur ligase family, glutamate ligase domain FE249_11345 PF08245 Mur ligase middle domain FE249_11345 PF01225 Mur ligase family, catalytic domain FE249_11350 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FE249_11350 PF01565 FAD binding domain FE249_11355 PF01820 D-ala D-ala ligase N-terminus FE249_11355 PF07478 D-ala D-ala ligase C-terminus FE249_11360 PF03799 Cell division protein FtsQ FE249_11360 PF08478 POTRA domain, FtsQ-type FE249_11365 PF02491 SHS2 domain inserted in FTSA FE249_11370 PF12327 FtsZ family, C-terminal domain FE249_11370 PF00091 Tubulin/FtsZ family, GTPase domain FE249_11380 PF13567 Domain of unknown function (DUF4131) FE249_11380 PF00753 Metallo-beta-lactamase superfamily FE249_11380 PF03772 Competence protein FE249_11390 PF02397 Bacterial sugar transferase FE249_11400 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_11400 PF01799 [2Fe-2S] binding domain FE249_11405 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_11405 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_11410 PF00941 FAD binding domain in molybdopterin dehydrogenase FE249_11410 PF03450 CO dehydrogenase flavoprotein C-terminal domain FE249_11420 PF12706 Beta-lactamase superfamily domain FE249_11425 PF03070 TENA/THI-4/PQQC family FE249_11430 PF05402 Coenzyme PQQ synthesis protein D (PqqD) FE249_11435 PF13186 Iron-sulfur cluster-binding domain FE249_11435 PF04055 Radical SAM superfamily FE249_11440 PF08032 RNA 2'-O ribose methyltransferase substrate binding FE249_11440 PF00588 SpoU rRNA Methylase family FE249_11460 PF00857 Isochorismatase family FE249_11470 PF00920 Dehydratase family FE249_11480 PF00376 MerR family regulatory protein FE249_11480 PF09278 MerR, DNA binding FE249_11485 PF00873 AcrB/AcrD/AcrF family FE249_11490 PF13533 Biotin-lipoyl like FE249_11505 PF08223 PaaX-like protein C-terminal domain FE249_11505 PF07848 PaaX-like protein FE249_11525 PF00872 Transposase, Mutator family FE249_11535 PF13340 Putative transposase of IS4/5 family (DUF4096) FE249_11550 PF05717 IS66 Orf2 like protein FE249_11555 PF13005 zinc-finger binding domain of transposase IS66 FE249_11555 PF13007 Transposase C of IS166 homeodomain FE249_11555 PF13817 IS66 C-terminal element FE249_11555 PF03050 Transposase IS66 family FE249_11560 PF01548 Transposase FE249_11560 PF02371 Transposase IS116/IS110/IS902 family FE249_11565 PF06470 SMC proteins Flexible Hinge Domain FE249_11565 PF02463 RecF/RecN/SMC N terminal domain FE249_11590 PF00872 Transposase, Mutator family FE249_11620 PF00990 Diguanylate cyclase, GGDEF domain FE249_11620 PF00563 EAL domain FE249_11620 PF13188 PAS domain FE249_11620 PF03707 Bacterial signalling protein N terminal repeat FE249_11630 PF02796 Helix-turn-helix domain of resolvase FE249_11630 PF00665 Integrase core domain FE249_11635 PF01695 IstB-like ATP binding protein FE249_11655 PF00872 Transposase, Mutator family FE249_11670 PF00005 ABC transporter FE249_11675 PF00528 Binding-protein-dependent transport system inner membrane component FE249_11685 PF09084 NMT1/THI5 like FE249_11690 PF00890 FAD binding domain FE249_11690 PF14537 Cytochrome c3 FE249_11705 PF04303 PrpF protein FE249_11720 PF12833 Helix-turn-helix domain FE249_11735 PF04030 D-arabinono-1,4-lactone oxidase FE249_11735 PF01565 FAD binding domain FE249_11745 PF13520 Amino acid permease FE249_11750 PF00072 Response regulator receiver domain FE249_11750 PF00196 Bacterial regulatory proteins, luxR family FE249_11780 PF07690 Major Facilitator Superfamily FE249_11790 PF05378 Hydantoinase/oxoprolinase N-terminal region FE249_11790 PF01968 Hydantoinase/oxoprolinase FE249_11795 PF04909 Amidohydrolase FE249_11805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_11805 PF03466 LysR substrate binding domain FE249_11810 PF03737 Aldolase/RraA FE249_11815 PF07690 Major Facilitator Superfamily FE249_11820 PF04909 Amidohydrolase FE249_11825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FE249_11825 PF01842 ACT domain FE249_11825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FE249_11830 PF01609 Transposase DDE domain FE249_11835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_11835 PF03466 LysR substrate binding domain FE249_11850 PF03466 LysR substrate binding domain FE249_11850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_11860 PF07859 alpha/beta hydrolase fold FE249_11865 PF00106 short chain dehydrogenase FE249_11885 PF01548 Transposase FE249_11895 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FE249_11895 PF00561 alpha/beta hydrolase fold FE249_11905 PF12146 Serine aminopeptidase, S33 FE249_11910 PF02423 Ornithine cyclodeaminase/mu-crystallin family FE249_11915 PF00491 Arginase family FE249_11920 PF01037 Lrp/AsnC ligand binding domain FE249_11930 PF01609 Transposase DDE domain FE249_11935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE249_11935 PF00205 Thiamine pyrophosphate enzyme, central domain FE249_11935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE249_11940 PF00392 Bacterial regulatory proteins, gntR family FE249_11940 PF07729 FCD domain FE249_11945 PF13407 Periplasmic binding protein domain FE249_11950 PF00005 ABC transporter FE249_11955 PF02653 Branched-chain amino acid transport system / permease component FE249_11960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FE249_11960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FE249_11980 PF13817 IS66 C-terminal element FE249_11980 PF13007 Transposase C of IS166 homeodomain FE249_11980 PF13005 zinc-finger binding domain of transposase IS66 FE249_11980 PF03050 Transposase IS66 family FE249_11985 PF05717 IS66 Orf2 like protein FE249_12000 PF02796 Helix-turn-helix domain of resolvase FE249_12000 PF00665 Integrase core domain FE249_12005 PF01695 IstB-like ATP binding protein FE249_12010 PF02558 Ketopantoate reductase PanE/ApbA FE249_12010 PF08546 Ketopantoate reductase PanE/ApbA C terminal FE249_12015 PF07690 Major Facilitator Superfamily FE249_12020 PF13533 Biotin-lipoyl like FE249_12030 PF00106 short chain dehydrogenase FE249_12055 PF13188 PAS domain FE249_12055 PF00563 EAL domain FE249_12055 PF00990 Diguanylate cyclase, GGDEF domain FE249_12055 PF03707 Bacterial signalling protein N terminal repeat FE249_12090 PF16123 Hydroxyacylglutathione hydrolase C-terminus FE249_12090 PF00753 Metallo-beta-lactamase superfamily FE249_12095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_12095 PF03466 LysR substrate binding domain FE249_12100 PF13276 HTH-like domain FE249_12100 PF13683 Integrase core domain FE249_12125 PF03748 Flagellar basal body-associated protein FliL FE249_12130 PF01336 OB-fold nucleic acid binding domain FE249_12130 PF02811 PHP domain FE249_12130 PF14579 Helix-hairpin-helix motif FE249_12130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FE249_12130 PF07733 Bacterial DNA polymerase III alpha NTPase domain FE249_12145 PF00460 Flagella basal body rod protein FE249_12145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE249_12150 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FE249_12150 PF00460 Flagella basal body rod protein FE249_12160 PF02107 Flagellar L-ring protein FE249_12190 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE249_12195 PF00034 Cytochrome c FE249_12205 PF00155 Aminotransferase class I and II FE249_12210 PF12291 Protein of unknown function (DUF3623) FE249_12215 PF02915 Rubrerythrin FE249_12235 PF05239 PRC-barrel domain FE249_12235 PF03967 Photosynthetic reaction centre, H-chain N-terminal region FE249_12240 PF03209 PUCC protein FE249_12245 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus FE249_12245 PF05175 Methyltransferase small domain FE249_12250 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family FE249_12255 PF02514 CobN/Magnesium Chelatase FE249_12255 PF11965 Domain of unknown function (DUF3479) FE249_12260 PF00148 Nitrogenase component 1 type Oxidoreductase FE249_12260 PF08369 Proto-chlorophyllide reductase 57 kD subunit FE249_12265 PF00148 Nitrogenase component 1 type Oxidoreductase FE249_12270 PF07284 2-vinyl bacteriochlorophyllide hydratase (BCHF) FE249_12280 PF02954 Bacterial regulatory protein, Fis family FE249_12280 PF13188 PAS domain FE249_12280 PF13426 PAS domain FE249_12285 PF01040 UbiA prenyltransferase family FE249_12295 PF03073 TspO/MBR family FE249_12300 PF01078 Magnesium chelatase, subunit ChlI FE249_12300 PF17863 AAA lid domain FE249_12305 PF17863 AAA lid domain FE249_12310 PF12697 Alpha/beta hydrolase family FE249_12315 PF01593 Flavin containing amine oxidoreductase FE249_12330 PF01593 Flavin containing amine oxidoreductase FE249_12335 PF00348 Polyprenyl synthetase FE249_12340 PF00891 O-methyltransferase domain FE249_12345 PF08240 Alcohol dehydrogenase GroES-like domain FE249_12350 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family FE249_12355 PF00148 Nitrogenase component 1 type Oxidoreductase FE249_12360 PF00148 Nitrogenase component 1 type Oxidoreductase FE249_12360 PF08369 Proto-chlorophyllide reductase 57 kD subunit FE249_12365 PF00556 Antenna complex alpha/beta subunit FE249_12370 PF00556 Antenna complex alpha/beta subunit FE249_12375 PF00124 Photosynthetic reaction centre protein FE249_12380 PF00124 Photosynthetic reaction centre protein FE249_12385 PF02276 Photosynthetic reaction centre cytochrome C subunit FE249_12430 PF01757 Acyltransferase family FE249_12455 PF01943 Polysaccharide biosynthesis protein FE249_12460 PF00733 Asparagine synthase FE249_12460 PF13537 Glutamine amidotransferase domain FE249_12465 PF13439 Glycosyltransferase Family 4 FE249_12465 PF00534 Glycosyl transferases group 1 FE249_12470 PF13439 Glycosyltransferase Family 4 FE249_12470 PF00534 Glycosyl transferases group 1 FE249_12480 PF00534 Glycosyl transferases group 1 FE249_12480 PF13439 Glycosyltransferase Family 4 FE249_12495 PF02082 Transcriptional regulator FE249_12500 PF00970 Oxidoreductase FAD-binding domain FE249_12500 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_12500 PF00175 Oxidoreductase NAD-binding domain FE249_12505 PF03063 Prismane/CO dehydrogenase family FE249_12520 PF00005 ABC transporter FE249_12525 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FE249_12535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_12535 PF03459 TOBE domain FE249_12540 PF00171 Aldehyde dehydrogenase family FE249_12545 PF02834 LigT like Phosphoesterase FE249_12550 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE249_12555 PF02556 Preprotein translocase subunit SecB FE249_12560 PF00291 Pyridoxal-phosphate dependent enzyme FE249_12560 PF14821 Threonine synthase N terminus FE249_12565 PF05193 Peptidase M16 inactive domain FE249_12565 PF00675 Insulinase (Peptidase family M16) FE249_12570 PF01523 Putative modulator of DNA gyrase FE249_12580 PF08264 Anticodon-binding domain of tRNA FE249_12580 PF00133 tRNA synthetases class I (I, L, M and V) FE249_12580 PF10458 Valyl tRNA synthetase tRNA binding arm FE249_12605 PF16177 Acetyl-coenzyme A synthetase N-terminus FE249_12605 PF13193 AMP-binding enzyme C-terminal domain FE249_12605 PF00501 AMP-binding enzyme FE249_12610 PF16123 Hydroxyacylglutathione hydrolase C-terminus FE249_12610 PF00753 Metallo-beta-lactamase superfamily FE249_12615 PF01209 ubiE/COQ5 methyltransferase family FE249_12625 PF01106 NifU-like domain FE249_12630 PF00881 Nitroreductase family FE249_12635 PF00814 Glycoprotease family FE249_12640 PF00583 Acetyltransferase (GNAT) family FE249_12650 PF05443 ROS/MUCR transcriptional regulator protein FE249_12655 PF00455 DeoR C terminal sensor domain FE249_12655 PF08220 DeoR-like helix-turn-helix domain FE249_12660 PF02129 X-Pro dipeptidyl-peptidase (S15 family) FE249_12665 PF00132 Bacterial transferase hexapeptide (six repeats) FE249_12665 PF06426 Serine acetyltransferase, N-terminal FE249_12670 PF00266 Aminotransferase class-V FE249_12675 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_12690 PF17209 Hfq protein FE249_12695 PF16360 GTP-binding GTPase Middle Region FE249_12695 PF13167 GTP-binding GTPase N-terminal FE249_12695 PF01926 50S ribosome-binding GTPase FE249_12700 PF00459 Inositol monophosphatase family FE249_12705 PF03819 MazG nucleotide pyrophosphohydrolase domain FE249_12710 PF00174 Oxidoreductase molybdopterin binding domain FE249_12715 PF00293 NUDIX domain FE249_12720 PF00270 DEAD/DEAH box helicase FE249_12720 PF00271 Helicase conserved C-terminal domain FE249_12720 PF17191 RecG wedge domain FE249_12725 PF03937 Flavinator of succinate dehydrogenase FE249_12730 PF00271 Helicase conserved C-terminal domain FE249_12730 PF03461 TRCF domain FE249_12730 PF17757 UvrB interaction domain FE249_12730 PF02559 CarD-like/TRCF domain FE249_12730 PF00270 DEAD/DEAH box helicase FE249_12740 PF01906 Putative heavy-metal-binding FE249_12750 PF00392 Bacterial regulatory proteins, gntR family FE249_12750 PF07702 UTRA domain FE249_12755 PF01175 Urocanase Rossmann-like domain FE249_12755 PF17392 Urocanase C-terminal domain FE249_12755 PF17391 Urocanase N-terminal domain FE249_12765 PF00221 Aromatic amino acid lyase FE249_12770 PF01979 Amidohydrolase family FE249_12780 PF00158 Sigma-54 interaction domain FE249_12780 PF01590 GAF domain FE249_12780 PF02954 Bacterial regulatory protein, Fis family FE249_12785 PF00171 Aldehyde dehydrogenase family FE249_12795 PF01011 PQQ enzyme repeat FE249_12795 PF13360 PQQ-like domain FE249_12805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE249_12810 PF00196 Bacterial regulatory proteins, luxR family FE249_12810 PF00072 Response regulator receiver domain FE249_12830 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE249_12840 PF00285 Citrate synthase, C-terminal domain FE249_12855 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FE249_12860 PF00106 short chain dehydrogenase FE249_12865 PF00692 dUTPase FE249_12870 PF04127 DNA / pantothenate metabolism flavoprotein FE249_12870 PF02441 Flavoprotein FE249_12875 PF01209 ubiE/COQ5 methyltransferase family FE249_12880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FE249_12880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FE249_12885 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FE249_12890 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FE249_12900 PF00216 Bacterial DNA-binding protein FE249_12905 PF01914 MarC family integral membrane protein FE249_12910 PF12804 MobA-like NTP transferase domain FE249_12920 PF01118 Semialdehyde dehydrogenase, NAD binding domain FE249_12920 PF02774 Semialdehyde dehydrogenase, dimerisation domain FE249_12925 PF01112 Asparaginase FE249_12930 PF00378 Enoyl-CoA hydratase/isomerase FE249_12940 PF00226 DnaJ domain FE249_12945 PF07728 AAA domain (dynein-related subfamily) FE249_12945 PF08406 CbbQ/NirQ/NorQ C-terminal FE249_12945 PF12556 Cobaltochelatase CobS subunit N terminal FE249_12950 PF06213 Cobalamin biosynthesis protein CobT FE249_12950 PF11775 Cobalamin biosynthesis protein CobT VWA domain FE249_12970 PF00459 Inositol monophosphatase family FE249_12975 PF01132 Elongation factor P (EF-P) OB domain FE249_12975 PF08207 Elongation factor P (EF-P) KOW-like domain FE249_12975 PF09285 Elongation factor P, C-terminal FE249_13000 PF00892 EamA-like transporter family FE249_13005 PF02574 Homocysteine S-methyltransferase FE249_13005 PF02310 B12 binding domain FE249_13005 PF02607 B12 binding domain FE249_13005 PF02965 Vitamin B12 dependent methionine synthase, activation domain FE249_13005 PF00809 Pterin binding enzyme FE249_13030 PF00889 Elongation factor TS FE249_13035 PF00318 Ribosomal protein S2 FE249_13040 PF06969 HemN C-terminal domain FE249_13040 PF04055 Radical SAM superfamily FE249_13050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FE249_13055 PF03480 Bacterial extracellular solute-binding protein, family 7 FE249_13055 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FE249_13060 PF03328 HpcH/HpaI aldolase/citrate lyase family FE249_13075 PF17092 Penicillin-binding protein OB-like domain FE249_13075 PF00912 Transglycosylase FE249_13075 PF00905 Penicillin binding protein transpeptidase domain FE249_13090 PF13243 Squalene-hopene cyclase C-terminal domain FE249_13090 PF13249 Squalene-hopene cyclase N-terminal domain FE249_13095 PF07690 Major Facilitator Superfamily FE249_13105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FE249_13110 PF02874 ATP synthase alpha/beta family, beta-barrel domain FE249_13110 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE249_13115 PF00231 ATP synthase FE249_13120 PF02874 ATP synthase alpha/beta family, beta-barrel domain FE249_13120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE249_13120 PF00306 ATP synthase alpha/beta chain, C terminal domain FE249_13125 PF00213 ATP synthase delta (OSCP) subunit FE249_13130 PF00270 DEAD/DEAH box helicase FE249_13130 PF17764 3′ DNA-binding domain (3′BD) FE249_13130 PF18074 Primosomal protein N C-terminal domain FE249_13130 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FE249_13135 PF01926 50S ribosome-binding GTPase FE249_13135 PF06071 Protein of unknown function (DUF933) FE249_13140 PF01195 Peptidyl-tRNA hydrolase FE249_13145 PF01386 Ribosomal L25p family FE249_13145 PF14693 Ribosomal protein TL5, C-terminal domain FE249_13150 PF00005 ABC transporter FE249_13165 PF00571 CBS domain FE249_13165 PF01380 SIS domain FE249_13170 PF01612 3'-5' exonuclease FE249_13170 PF00570 HRDC domain FE249_13185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FE249_13185 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_13190 PF01645 Conserved region in glutamate synthase FE249_13190 PF04898 Glutamate synthase central domain FE249_13190 PF00310 Glutamine amidotransferases class-II FE249_13190 PF01493 GXGXG motif FE249_13195 PF01725 Ham1 family FE249_13200 PF03725 3' exoribonuclease family, domain 2 FE249_13200 PF01138 3' exoribonuclease family, domain 1 FE249_13205 PF01628 HrcA protein C terminal domain FE249_13215 PF04198 Putative sugar-binding domain FE249_13220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE249_13220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE249_13225 PF08240 Alcohol dehydrogenase GroES-like domain FE249_13225 PF00107 Zinc-binding dehydrogenase FE249_13235 PF00528 Binding-protein-dependent transport system inner membrane component FE249_13240 PF00528 Binding-protein-dependent transport system inner membrane component FE249_13245 PF08402 TOBE domain FE249_13245 PF00005 ABC transporter FE249_13255 PF00075 RNase H FE249_13260 PF01636 Phosphotransferase enzyme family FE249_13285 PF01025 GrpE FE249_13290 PF00012 Hsp70 protein FE249_13295 PF00684 DnaJ central domain FE249_13295 PF01556 DnaJ C terminal domain FE249_13295 PF00226 DnaJ domain FE249_13310 PF02515 CoA-transferase family III FE249_13315 PF00106 short chain dehydrogenase FE249_13320 PF12706 Beta-lactamase superfamily domain FE249_13330 PF00654 Voltage gated chloride channel FE249_13335 PF00005 ABC transporter FE249_13335 PF00664 ABC transporter transmembrane region FE249_13340 PF00005 ABC transporter FE249_13340 PF00664 ABC transporter transmembrane region FE249_13345 PF01654 Cytochrome bd terminal oxidase subunit I FE249_13350 PF02322 Cytochrome bd terminal oxidase subunit II FE249_13365 PF00027 Cyclic nucleotide-binding domain FE249_13365 PF13545 Crp-like helix-turn-helix domain FE249_13370 PF00571 CBS domain FE249_13370 PF01743 Poly A polymerase head domain FE249_13370 PF02272 DHHA1 domain FE249_13370 PF01368 DHH family FE249_13375 PF00155 Aminotransferase class I and II FE249_13390 PF03969 AFG1-like ATPase FE249_13395 PF08442 ATP-grasp domain FE249_13395 PF00549 CoA-ligase FE249_13400 PF02629 CoA binding domain FE249_13400 PF00549 CoA-ligase FE249_13405 PF00676 Dehydrogenase E1 component FE249_13405 PF16870 2-oxoglutarate dehydrogenase C-terminal FE249_13405 PF02779 Transketolase, pyrimidine binding domain FE249_13405 PF16078 2-oxoglutarate dehydrogenase N-terminus FE249_13410 PF02817 e3 binding domain FE249_13410 PF00364 Biotin-requiring enzyme FE249_13410 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FE249_13415 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE249_13415 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_13425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FE249_13445 PF00875 DNA photolyase FE249_13445 PF03441 FAD binding domain of DNA photolyase FE249_13455 PF00270 DEAD/DEAH box helicase FE249_13455 PF08494 DEAD/H associated FE249_13455 PF00271 Helicase conserved C-terminal domain FE249_13465 PF04675 DNA ligase N terminus FE249_13465 PF04679 ATP dependent DNA ligase C terminal region FE249_13465 PF01068 ATP dependent DNA ligase domain FE249_13470 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FE249_13470 PF02222 ATP-grasp domain FE249_13475 PF00731 AIR carboxylase FE249_13495 PF06463 Molybdenum Cofactor Synthesis C FE249_13495 PF04055 Radical SAM superfamily FE249_13500 PF00990 Diguanylate cyclase, GGDEF domain FE249_13500 PF17155 Gammaproteobacterial periplasmic sensor domain FE249_13510 PF02653 Branched-chain amino acid transport system / permease component FE249_13515 PF13407 Periplasmic binding protein domain FE249_13520 PF00005 ABC transporter FE249_13525 PF00149 Calcineurin-like phosphoesterase FE249_13530 PF00083 Sugar (and other) transporter FE249_13535 PF08676 MutL C terminal dimerisation domain FE249_13535 PF01119 DNA mismatch repair protein, C-terminal domain FE249_13545 PF02653 Branched-chain amino acid transport system / permease component FE249_13550 PF00005 ABC transporter FE249_13555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE249_13555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE249_13565 PF08240 Alcohol dehydrogenase GroES-like domain FE249_13565 PF00107 Zinc-binding dehydrogenase FE249_13570 PF00356 Bacterial regulatory proteins, lacI family FE249_13575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_13575 PF00672 HAMP domain FE249_13585 PF07690 Major Facilitator Superfamily FE249_13595 PF02665 Nitrate reductase gamma subunit FE249_13600 PF02613 Nitrate reductase delta subunit FE249_13605 PF13247 4Fe-4S dicluster domain FE249_13605 PF14711 Respiratory nitrate reductase beta C-terminal FE249_13610 PF01568 Molydopterin dinucleotide binding domain FE249_13610 PF00384 Molybdopterin oxidoreductase FE249_13610 PF14710 Respiratory nitrate reductase alpha N-terminal FE249_13625 PF00248 Aldo/keto reductase family FE249_13630 PF01575 MaoC like domain FE249_13635 PF02803 Thiolase, C-terminal domain FE249_13635 PF00108 Thiolase, N-terminal domain FE249_13650 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_13650 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_13650 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_13650 PF12806 Acetyl-CoA dehydrogenase C-terminal like FE249_13670 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FE249_13670 PF13360 PQQ-like domain FE249_13680 PF00106 short chain dehydrogenase FE249_13705 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_13705 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_13710 PF04055 Radical SAM superfamily FE249_13720 PF05721 Phytanoyl-CoA dioxygenase (PhyH) FE249_13730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_13730 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_13730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_13745 PF00990 Diguanylate cyclase, GGDEF domain FE249_13745 PF13188 PAS domain FE249_13745 PF03707 Bacterial signalling protein N terminal repeat FE249_13745 PF00563 EAL domain FE249_13750 PF08447 PAS fold FE249_13750 PF00563 EAL domain FE249_13750 PF00990 Diguanylate cyclase, GGDEF domain FE249_13750 PF08448 PAS fold FE249_13760 PF02590 Predicted SPOUT methyltransferase FE249_13770 PF01467 Cytidylyltransferase-like FE249_13775 PF00171 Aldehyde dehydrogenase family FE249_13780 PF00293 NUDIX domain FE249_13785 PF18146 Damage-inducible protein CinA KH domain FE249_13785 PF02464 Competence-damaged protein FE249_13785 PF00994 Probable molybdopterin binding domain FE249_13800 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FE249_13800 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FE249_13805 PF02910 Fumarate reductase flavoprotein C-term FE249_13805 PF00890 FAD binding domain FE249_13810 PF02445 Quinolinate synthetase A protein FE249_13820 PF00106 short chain dehydrogenase FE249_13830 PF01923 Cobalamin adenosyltransferase FE249_13835 PF01545 Cation efflux family FE249_13835 PF16916 Dimerisation domain of Zinc Transporter FE249_13840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_13840 PF00512 His Kinase A (phospho-acceptor) domain FE249_13840 PF16736 Single Cache-like FE249_13840 PF00989 PAS fold FE249_13850 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FE249_13860 PF01546 Peptidase family M20/M25/M40 FE249_13860 PF07687 Peptidase dimerisation domain FE249_13865 PF00132 Bacterial transferase hexapeptide (six repeats) FE249_13865 PF14602 Hexapeptide repeat of succinyl-transferase FE249_13865 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FE249_13880 PF02801 Beta-ketoacyl synthase, C-terminal domain FE249_13880 PF00109 Beta-ketoacyl synthase, N-terminal domain FE249_13885 PF00550 Phosphopantetheine attachment site FE249_13895 PF00698 Acyl transferase domain FE249_13905 PF13614 AAA domain FE249_13905 PF02706 Chain length determinant protein FE249_13905 PF13807 G-rich domain on putative tyrosine kinase FE249_13940 PF01039 Carboxyl transferase domain FE249_13945 PF00378 Enoyl-CoA hydratase/isomerase FE249_13950 PF02785 Biotin carboxylase C-terminal domain FE249_13950 PF00289 Biotin carboxylase, N-terminal domain FE249_13950 PF00364 Biotin-requiring enzyme FE249_13950 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE249_13950 PF18140 Propionyl-coenzyme A carboxylase BT domain FE249_13965 PF01084 Ribosomal protein S18 FE249_13970 PF03948 Ribosomal protein L9, C-terminal domain FE249_13970 PF01281 Ribosomal protein L9, N-terminal domain FE249_13980 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FE249_13985 PF00692 dUTPase FE249_14010 PF01367 5'-3' exonuclease, C-terminal SAM fold FE249_14010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FE249_14010 PF00476 DNA polymerase family A FE249_14010 PF01612 3'-5' exonuclease FE249_14020 PF00633 Helix-hairpin-helix motif FE249_14020 PF00730 HhH-GPD superfamily base excision DNA repair protein FE249_14020 PF14815 NUDIX domain FE249_14025 PF00463 Isocitrate lyase family FE249_14030 PF06114 IrrE N-terminal-like domain FE249_14030 PF09856 Predicted transcriptional regulator (DUF2083) FE249_14030 PF01381 Helix-turn-helix FE249_14040 PF00132 Bacterial transferase hexapeptide (six repeats) FE249_14050 PF00462 Glutaredoxin FE249_14065 PF04002 RadC-like JAB domain FE249_14070 PF00557 Metallopeptidase family M24 FE249_14075 PF07690 Major Facilitator Superfamily FE249_14085 PF00571 CBS domain FE249_14085 PF00291 Pyridoxal-phosphate dependent enzyme FE249_14095 PF00924 Mechanosensitive ion channel FE249_14110 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FE249_14110 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FE249_14115 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FE249_14125 PF03109 ABC1 family FE249_14140 PF01479 S4 domain FE249_14140 PF00849 RNA pseudouridylate synthase FE249_14145 PF07722 Peptidase C26 FE249_14150 PF14437 MafB19-like deaminase FE249_14155 PF01514 Secretory protein of YscJ/FliF family FE249_14155 PF08345 Flagellar M-ring protein C-terminal FE249_14160 PF14841 FliG middle domain FE249_14160 PF14842 FliG N-terminal domain FE249_14160 PF01706 FliG C-terminal domain FE249_14165 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FE249_14170 PF02954 Bacterial regulatory protein, Fis family FE249_14170 PF00158 Sigma-54 interaction domain FE249_14185 PF10609 NUBPL iron-transfer P-loop NTPase FE249_14190 PF02899 Phage integrase, N-terminal SAM-like domain FE249_14190 PF00589 Phage integrase family FE249_14195 PF01761 3-dehydroquinate synthase FE249_14210 PF01292 Prokaryotic cytochrome b561 FE249_14215 PF13277 YmdB-like protein FE249_14220 PF02913 FAD linked oxidases, C-terminal domain FE249_14220 PF01565 FAD binding domain FE249_14225 PF02472 Biopolymer transport protein ExbD/TolR FE249_14230 PF01618 MotA/TolQ/ExbB proton channel family FE249_14235 PF00248 Aldo/keto reductase family FE249_14240 PF07690 Major Facilitator Superfamily FE249_14245 PF03061 Thioesterase superfamily FE249_14250 PF00085 Thioredoxin FE249_14255 PF12705 PD-(D/E)XK nuclease superfamily FE249_14255 PF00580 UvrD/REP helicase N-terminal domain FE249_14255 PF13361 UvrD-like helicase C-terminal domain FE249_14265 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FE249_14270 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_14275 PF00378 Enoyl-CoA hydratase/isomerase FE249_14280 PF01555 DNA methylase FE249_14280 PF18755 Restriction Enzyme Adenine Methylase Associated FE249_14285 PF08340 Domain of unknown function (DUF1732) FE249_14285 PF03755 YicC-like family, N-terminal region FE249_14290 PF00625 Guanylate kinase FE249_14300 PF00474 Sodium:solute symporter family FE249_14305 PF07690 Major Facilitator Superfamily FE249_14310 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FE249_14320 PF03466 LysR substrate binding domain FE249_14320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_14325 PF00206 Lyase FE249_14325 PF10415 Fumarase C C-terminus FE249_14330 PF00005 ABC transporter FE249_14335 PF00528 Binding-protein-dependent transport system inner membrane component FE249_14340 PF02767 DNA polymerase III beta subunit, central domain FE249_14340 PF00712 DNA polymerase III beta subunit, N-terminal domain FE249_14340 PF02768 DNA polymerase III beta subunit, C-terminal domain FE249_14345 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain FE249_14345 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain FE249_14365 PF00348 Polyprenyl synthetase FE249_14375 PF13091 PLD-like domain FE249_14375 PF13396 Phospholipase_D-nuclease N-terminal FE249_14385 PF00004 ATPase family associated with various cellular activities (AAA) FE249_14385 PF17862 AAA+ lid domain FE249_14385 PF06480 FtsH Extracellular FE249_14385 PF01434 Peptidase family M41 FE249_14390 PF05088 Bacterial NAD-glutamate dehydrogenase FE249_14395 PF00501 AMP-binding enzyme FE249_14395 PF13193 AMP-binding enzyme C-terminal domain FE249_14400 PF00106 short chain dehydrogenase FE249_14420 PF00753 Metallo-beta-lactamase superfamily FE249_14425 PF00465 Iron-containing alcohol dehydrogenase FE249_14430 PF01380 SIS domain FE249_14435 PF01230 HIT domain FE249_14440 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FE249_14445 PF00977 Histidine biosynthesis protein FE249_14450 PF00977 Histidine biosynthesis protein FE249_14455 PF00583 Acetyltransferase (GNAT) family FE249_14460 PF00117 Glutamine amidotransferase class-I FE249_14465 PF00475 Imidazoleglycerol-phosphate dehydratase FE249_14470 PF00083 Sugar (and other) transporter FE249_14480 PF00227 Proteasome subunit FE249_14485 PF10431 C-terminal, D2-small domain, of ClpB protein FE249_14485 PF07724 AAA domain (Cdc48 subfamily) FE249_14485 PF00004 ATPase family associated with various cellular activities (AAA) FE249_14495 PF01425 Amidase FE249_14500 PF01546 Peptidase family M20/M25/M40 FE249_14500 PF07687 Peptidase dimerisation domain FE249_14505 PF01566 Natural resistance-associated macrophage protein FE249_14510 PF09190 DALR domain FE249_14510 PF01406 tRNA synthetases class I (C) catalytic domain FE249_14525 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE249_14530 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FE249_14535 PF00361 Proton-conducting membrane transporter FE249_14545 PF00146 NADH dehydrogenase FE249_14550 PF00361 Proton-conducting membrane transporter FE249_14560 PF00873 AcrB/AcrD/AcrF family FE249_14570 PF00581 Rhodanese-like domain FE249_14575 PF01022 Bacterial regulatory protein, arsR family FE249_14580 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_14585 PF00085 Thioredoxin FE249_14595 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE249_14620 PF02332 Methane/Phenol/Toluene Hydroxylase FE249_14625 PF00970 Oxidoreductase FAD-binding domain FE249_14625 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_14625 PF00175 Oxidoreductase NAD-binding domain FE249_14630 PF02332 Methane/Phenol/Toluene Hydroxylase FE249_14635 PF02406 MmoB/DmpM family FE249_14645 PF00118 TCP-1/cpn60 chaperonin family FE249_14650 PF02954 Bacterial regulatory protein, Fis family FE249_14650 PF13426 PAS domain FE249_14650 PF00158 Sigma-54 interaction domain FE249_14680 PF00266 Aminotransferase class-V FE249_14685 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FE249_14685 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FE249_14690 PF02805 Metal binding domain of Ada FE249_14690 PF06029 AlkA N-terminal domain FE249_14690 PF00730 HhH-GPD superfamily base excision DNA repair protein FE249_14690 PF12833 Helix-turn-helix domain FE249_14700 PF02653 Branched-chain amino acid transport system / permease component FE249_14705 PF00005 ABC transporter FE249_14710 PF13439 Glycosyltransferase Family 4 FE249_14710 PF00534 Glycosyl transferases group 1 FE249_14715 PF00005 ABC transporter FE249_14715 PF00664 ABC transporter transmembrane region FE249_14745 PF03471 Transporter associated domain FE249_14745 PF00571 CBS domain FE249_14750 PF02130 Uncharacterized protein family UPF0054 FE249_14755 PF02562 PhoH-like protein FE249_14760 PF04055 Radical SAM superfamily FE249_14760 PF00919 Uncharacterized protein family UPF0004 FE249_14760 PF01938 TRAM domain FE249_14770 PF05045 Rhamnan synthesis protein F FE249_14785 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FE249_14785 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FE249_14785 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FE249_14790 PF03466 LysR substrate binding domain FE249_14790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_14795 PF03788 LrgA family FE249_14810 PF01741 Large-conductance mechanosensitive channel, MscL FE249_14815 PF08331 Domain of unknown function (DUF1730) FE249_14820 PF14489 QueF-like protein FE249_14825 PF01702 Queuine tRNA-ribosyltransferase FE249_14830 PF02547 Queuosine biosynthesis protein FE249_14835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FE249_14840 PF05681 Fumarate hydratase (Fumerase) FE249_14840 PF05683 Fumarase C-terminus FE249_14855 PF01475 Ferric uptake regulator family FE249_14870 PF13742 OB-fold nucleic acid binding domain FE249_14870 PF02601 Exonuclease VII, large subunit FE249_14875 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FE249_14875 PF02843 Phosphoribosylglycinamide synthetase, C domain FE249_14875 PF02844 Phosphoribosylglycinamide synthetase, N domain FE249_14880 PF00290 Tryptophan synthase alpha chain FE249_14885 PF00291 Pyridoxal-phosphate dependent enzyme FE249_14895 PF02230 Phospholipase/Carboxylesterase FE249_14900 PF00749 tRNA synthetases class I (E and Q), catalytic domain FE249_14905 PF13180 PDZ domain FE249_14910 PF03928 Haem-degrading FE249_14925 PF01264 Chorismate synthase FE249_14930 PF00009 Elongation factor Tu GTP binding domain FE249_14935 PF01507 Phosphoadenosine phosphosulfate reductase family FE249_14940 PF13180 PDZ domain FE249_14945 PF17954 Quercetinase C-terminal cupin domain FE249_14945 PF02678 Pirin FE249_14950 PF01047 MarR family FE249_14970 PF00334 Nucleoside diphosphate kinase FE249_14975 PF00005 ABC transporter FE249_14975 PF12848 ABC transporter FE249_14980 PF07690 Major Facilitator Superfamily FE249_14990 PF00679 Elongation factor G C-terminus FE249_14990 PF00009 Elongation factor Tu GTP binding domain FE249_14990 PF03144 Elongation factor Tu domain 2 FE249_14995 PF00248 Aldo/keto reductase family FE249_15005 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE249_15005 PF07683 Cobalamin synthesis protein cobW C-terminal domain FE249_15015 PF00534 Glycosyl transferases group 1 FE249_15015 PF13439 Glycosyltransferase Family 4 FE249_15020 PF00561 alpha/beta hydrolase fold FE249_15020 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FE249_15030 PF00155 Aminotransferase class I and II FE249_15035 PF03447 Homoserine dehydrogenase, NAD binding domain FE249_15035 PF01842 ACT domain FE249_15035 PF00742 Homoserine dehydrogenase FE249_15040 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FE249_15045 PF01368 DHH family FE249_15045 PF02272 DHHA1 domain FE249_15045 PF17768 RecJ OB domain FE249_15045 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FE249_15090 PF08447 PAS fold FE249_15090 PF13426 PAS domain FE249_15090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_15100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_15100 PF03466 LysR substrate binding domain FE249_15105 PF07681 DoxX FE249_15115 PF01609 Transposase DDE domain FE249_15135 PF00872 Transposase, Mutator family FE249_15140 PF13340 Putative transposase of IS4/5 family (DUF4096) FE249_15155 PF02646 RmuC family FE249_15160 PF00009 Elongation factor Tu GTP binding domain FE249_15160 PF00679 Elongation factor G C-terminus FE249_15160 PF03144 Elongation factor Tu domain 2 FE249_15160 PF06421 GTP-binding protein LepA C-terminus FE249_15165 PF00923 Transaldolase/Fructose-6-phosphate aldolase FE249_15170 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE249_15170 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FE249_15175 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FE249_15175 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FE249_15185 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FE249_15190 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FE249_15195 PF00723 Glycosyl hydrolases family 15 FE249_15200 PF00180 Isocitrate/isopropylmalate dehydrogenase FE249_15205 PF00083 Sugar (and other) transporter FE249_15220 PF04303 PrpF protein FE249_15240 PF00487 Fatty acid desaturase FE249_15245 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_15245 PF00970 Oxidoreductase FAD-binding domain FE249_15245 PF00175 Oxidoreductase NAD-binding domain FE249_15250 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_15250 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_15250 PF09317 Domain of unknown function (DUF1974) FE249_15260 PF01575 MaoC like domain FE249_15265 PF02803 Thiolase, C-terminal domain FE249_15265 PF00108 Thiolase, N-terminal domain FE249_15270 PF00501 AMP-binding enzyme FE249_15270 PF13193 AMP-binding enzyme C-terminal domain FE249_15280 PF00171 Aldehyde dehydrogenase family FE249_15285 PF00732 GMC oxidoreductase FE249_15285 PF05199 GMC oxidoreductase FE249_15290 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FE249_15335 PF01274 Malate synthase FE249_15340 PF00970 Oxidoreductase FAD-binding domain FE249_15340 PF00175 Oxidoreductase NAD-binding domain FE249_15355 PF00793 DAHP synthetase I family FE249_15360 PF06418 CTP synthase N-terminus FE249_15360 PF00117 Glutamine amidotransferase class-I FE249_15365 PF03840 Preprotein translocase SecG subunit FE249_15370 PF00121 Triosephosphate isomerase FE249_15380 PF00425 chorismate binding enzyme FE249_15380 PF04715 Anthranilate synthase component I, N terminal region FE249_15385 PF00591 Glycosyl transferase family, a/b domain FE249_15385 PF00117 Glutamine amidotransferase class-I FE249_15385 PF02885 Glycosyl transferase family, helical bundle domain FE249_15390 PF00218 Indole-3-glycerol phosphate synthase FE249_15395 PF01967 MoaC family FE249_15400 PF03453 MoeA N-terminal region (domain I and II) FE249_15400 PF03454 MoeA C-terminal region (domain IV) FE249_15400 PF00994 Probable molybdopterin binding domain FE249_15410 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain FE249_15410 PF05221 S-adenosyl-L-homocysteine hydrolase FE249_15420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FE249_15420 PF07497 Rho termination factor, RNA-binding domain FE249_15420 PF07498 Rho termination factor, N-terminal domain FE249_15425 PF02628 Cytochrome oxidase assembly protein FE249_15430 PF02628 Cytochrome oxidase assembly protein FE249_15435 PF01523 Putative modulator of DNA gyrase FE249_15440 PF00162 Phosphoglycerate kinase FE249_15445 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FE249_15445 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FE249_15450 PF00456 Transketolase, thiamine diphosphate binding domain FE249_15450 PF02780 Transketolase, C-terminal domain FE249_15450 PF02779 Transketolase, pyrimidine binding domain FE249_15455 PF00005 ABC transporter FE249_15455 PF06472 ABC transporter transmembrane region 2 FE249_15465 PF04321 RmlD substrate binding domain FE249_15470 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase FE249_15475 PF00483 Nucleotidyl transferase FE249_15480 PF16363 GDP-mannose 4,6 dehydratase FE249_15485 PF14307 Glycosyltransferase WbsX FE249_15485 PF05045 Rhamnan synthesis protein F FE249_15490 PF01425 Amidase FE249_15495 PF00875 DNA photolyase FE249_15495 PF03441 FAD binding domain of DNA photolyase FE249_15505 PF13193 AMP-binding enzyme C-terminal domain FE249_15505 PF00501 AMP-binding enzyme FE249_15510 PF03972 MmgE/PrpD family FE249_15515 PF00285 Citrate synthase, C-terminal domain FE249_15525 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_15525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_15525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_15530 PF00378 Enoyl-CoA hydratase/isomerase FE249_15535 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FE249_15535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FE249_15540 PF00501 AMP-binding enzyme FE249_15540 PF13193 AMP-binding enzyme C-terminal domain FE249_15545 PF00106 short chain dehydrogenase FE249_15555 PF01119 DNA mismatch repair protein, C-terminal domain FE249_15555 PF08676 MutL C terminal dimerisation domain FE249_15560 PF07859 alpha/beta hydrolase fold FE249_15565 PF07690 Major Facilitator Superfamily FE249_15575 PF01252 Signal peptidase (SPase) II FE249_15580 PF08264 Anticodon-binding domain of tRNA FE249_15580 PF00133 tRNA synthetases class I (I, L, M and V) FE249_15580 PF06827 Zinc finger found in FPG and IleRS FE249_15585 PF01794 Ferric reductase like transmembrane component FE249_15605 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE249_15610 PF01351 Ribonuclease HII FE249_15625 PF01817 Chorismate mutase type II FE249_15625 PF00800 Prephenate dehydratase FE249_15630 PF02348 Cytidylyltransferase FE249_15635 PF00034 Cytochrome c FE249_15640 PF00459 Inositol monophosphatase family FE249_15650 PF00180 Isocitrate/isopropylmalate dehydrogenase FE249_15655 PF13520 Amino acid permease FE249_15665 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FE249_15670 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FE249_15680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_15680 PF03466 LysR substrate binding domain FE249_15695 PF04085 rod shape-determining protein MreC FE249_15705 PF03717 Penicillin-binding Protein dimerisation domain FE249_15705 PF00905 Penicillin binding protein transpeptidase domain FE249_15710 PF01098 Cell cycle protein FE249_15715 PF00970 Oxidoreductase FAD-binding domain FE249_15715 PF00042 Globin FE249_15715 PF00175 Oxidoreductase NAD-binding domain FE249_15725 PF00501 AMP-binding enzyme FE249_15725 PF13193 AMP-binding enzyme C-terminal domain FE249_15735 PF00163 Ribosomal protein S4/S9 N-terminal domain FE249_15735 PF01479 S4 domain FE249_15740 PF02548 Ketopantoate hydroxymethyltransferase FE249_15745 PF00484 Carbonic anhydrase FE249_15750 PF02311 AraC-like ligand binding domain FE249_15750 PF12833 Helix-turn-helix domain FE249_15755 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase FE249_15755 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain FE249_15760 PF00941 FAD binding domain in molybdopterin dehydrogenase FE249_15760 PF03450 CO dehydrogenase flavoprotein C-terminal domain FE249_15765 PF01799 [2Fe-2S] binding domain FE249_15765 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_15770 PF00501 AMP-binding enzyme FE249_15770 PF13193 AMP-binding enzyme C-terminal domain FE249_15775 PF00378 Enoyl-CoA hydratase/isomerase FE249_15780 PF00691 OmpA family FE249_15780 PF13488 Glycine zipper FE249_15795 PF00440 Bacterial regulatory proteins, tetR family FE249_15800 PF03466 LysR substrate binding domain FE249_15800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_15805 PF00392 Bacterial regulatory proteins, gntR family FE249_15805 PF00155 Aminotransferase class I and II FE249_15820 PF00672 HAMP domain FE249_15820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FE249_15820 PF02203 Tar ligand binding domain homologue FE249_15825 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FE249_15830 PF00497 Bacterial extracellular solute-binding proteins, family 3 FE249_15835 PF00528 Binding-protein-dependent transport system inner membrane component FE249_15840 PF00005 ABC transporter FE249_15845 PF00294 pfkB family carbohydrate kinase FE249_15865 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FE249_15885 PF13356 Arm DNA-binding domain FE249_15885 PF00589 Phage integrase family FE249_15900 PF00140 Sigma-70 factor, region 1.2 FE249_15900 PF04542 Sigma-70 region 2 FE249_15900 PF04545 Sigma-70, region 4 FE249_16010 PF02586 SOS response associated peptidase (SRAP) FE249_16035 PF00850 Histone deacetylase domain FE249_16040 PF00009 Elongation factor Tu GTP binding domain FE249_16040 PF03144 Elongation factor Tu domain 2 FE249_16040 PF16658 Class II release factor RF3, C-terminal domain FE249_16080 PF01921 tRNA synthetases class I (K) FE249_16090 PF03814 Potassium-transporting ATPase A subunit FE249_16100 PF02669 K+-transporting ATPase, c chain FE249_16115 PF13493 Domain of unknown function (DUF4118) FE249_16115 PF13492 GAF domain FE249_16115 PF00512 His Kinase A (phospho-acceptor) domain FE249_16115 PF02702 Osmosensitive K+ channel His kinase sensor domain FE249_16115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_16120 PF00072 Response regulator receiver domain FE249_16120 PF00486 Transcriptional regulatory protein, C terminal FE249_16125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_16125 PF03466 LysR substrate binding domain FE249_16135 PF00456 Transketolase, thiamine diphosphate binding domain FE249_16140 PF02780 Transketolase, C-terminal domain FE249_16140 PF02779 Transketolase, pyrimidine binding domain FE249_16145 PF03480 Bacterial extracellular solute-binding protein, family 7 FE249_16150 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FE249_16150 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FE249_16165 PF02673 Bacitracin resistance protein BacA FE249_16170 PF00535 Glycosyl transferase family 2 FE249_16175 PF02657 Fe-S metabolism associated domain FE249_16180 PF00579 tRNA synthetases class I (W and Y) FE249_16190 PF03702 Anhydro-N-acetylmuramic acid kinase FE249_16195 PF01751 Toprim domain FE249_16195 PF13368 Topoisomerase C-terminal repeat FE249_16195 PF01396 Topoisomerase DNA binding C4 zinc finger FE249_16195 PF01131 DNA topoisomerase FE249_16200 PF02481 DNA recombination-mediator protein A FE249_16200 PF17782 DprA winged helix domain FE249_16205 PF02660 Glycerol-3-phosphate acyltransferase FE249_16210 PF01979 Amidohydrolase family FE249_16215 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FE249_16215 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FE249_16230 PF00795 Carbon-nitrogen hydrolase FE249_16235 PF01555 DNA methylase FE249_16245 PF00268 Ribonucleotide reductase, small chain FE249_16250 PF03477 ATP cone domain FE249_16250 PF02867 Ribonucleotide reductase, barrel domain FE249_16250 PF00317 Ribonucleotide reductase, all-alpha domain FE249_16255 PF00155 Aminotransferase class I and II FE249_16265 PF01061 ABC-2 type transporter FE249_16270 PF00005 ABC transporter FE249_16270 PF14524 Wzt C-terminal domain FE249_16280 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FE249_16280 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FE249_16285 PF14698 Argininosuccinate lyase C-terminal FE249_16285 PF00206 Lyase FE249_16290 PF08534 Redoxin FE249_16295 PF00764 Arginosuccinate synthase FE249_16310 PF01926 50S ribosome-binding GTPase FE249_16310 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FE249_16330 PF00575 S1 RNA binding domain FE249_16335 PF13525 Outer membrane lipoprotein FE249_16340 PF13476 AAA domain FE249_16340 PF02463 RecF/RecN/SMC N terminal domain FE249_16345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FE249_16345 PF03120 NAD-dependent DNA ligase OB-fold domain FE249_16345 PF00533 BRCA1 C Terminus (BRCT) domain FE249_16345 PF01653 NAD-dependent DNA ligase adenylation domain FE249_16345 PF12826 Helix-hairpin-helix motif FE249_16350 PF01258 Prokaryotic dksA/traR C4-type zinc finger FE249_16360 PF02119 Flagellar P-ring protein FE249_16375 PF00534 Glycosyl transferases group 1 FE249_16375 PF13439 Glycosyltransferase Family 4 FE249_16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_16380 PF08448 PAS fold FE249_16380 PF00072 Response regulator receiver domain FE249_16380 PF13188 PAS domain FE249_16380 PF00512 His Kinase A (phospho-acceptor) domain FE249_16390 PF00326 Prolyl oligopeptidase family FE249_16395 PF03649 Uncharacterised protein family (UPF0014) FE249_16400 PF00005 ABC transporter FE249_16405 PF07687 Peptidase dimerisation domain FE249_16405 PF01546 Peptidase family M20/M25/M40 FE249_16410 PF01329 Pterin 4 alpha carbinolamine dehydratase FE249_16415 PF03167 Uracil DNA glycosylase superfamily FE249_16435 PF00809 Pterin binding enzyme FE249_16440 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FE249_16440 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FE249_16440 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FE249_16440 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FE249_16445 PF08543 Phosphomethylpyrimidine kinase FE249_16450 PF02566 OsmC-like protein FE249_16455 PF06564 Cellulose biosynthesis protein BcsQ FE249_16460 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FE249_16465 PF00485 Phosphoribulokinase / Uridine kinase family FE249_16470 PF01116 Fructose-bisphosphate aldolase class-II FE249_16475 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain FE249_16475 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain FE249_16480 PF00101 Ribulose bisphosphate carboxylase, small chain FE249_16485 PF00004 ATPase family associated with various cellular activities (AAA) FE249_16485 PF17866 AAA lid domain FE249_16490 PF00834 Ribulose-phosphate 3 epimerase family FE249_16495 PF07969 Amidohydrolase family FE249_16500 PF01243 Pyridoxamine 5'-phosphate oxidase FE249_16500 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FE249_16515 PF00528 Binding-protein-dependent transport system inner membrane component FE249_16520 PF00005 ABC transporter FE249_16545 PF02634 FdhD/NarQ family FE249_16550 PF12838 4Fe-4S dicluster domain FE249_16550 PF00384 Molybdopterin oxidoreductase FE249_16550 PF01568 Molydopterin dinucleotide binding domain FE249_16550 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FE249_16550 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FE249_16555 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FE249_16555 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FE249_16555 PF00037 4Fe-4S binding domain FE249_16565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_16565 PF03466 LysR substrate binding domain FE249_16570 PF08240 Alcohol dehydrogenase GroES-like domain FE249_16570 PF00107 Zinc-binding dehydrogenase FE249_16575 PF02875 Mur ligase family, glutamate ligase domain FE249_16575 PF08245 Mur ligase middle domain FE249_16580 PF01039 Carboxyl transferase domain FE249_16580 PF17848 Acetyl-coA carboxylase zinc finger domain FE249_16590 PF07722 Peptidase C26 FE249_16595 PF07690 Major Facilitator Superfamily FE249_16605 PF01063 Amino-transferase class IV FE249_16610 PF12802 MarR family FE249_16615 PF00486 Transcriptional regulatory protein, C terminal FE249_16615 PF00072 Response regulator receiver domain FE249_16620 PF00512 His Kinase A (phospho-acceptor) domain FE249_16620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_16620 PF00672 HAMP domain FE249_16635 PF00270 DEAD/DEAH box helicase FE249_16635 PF00271 Helicase conserved C-terminal domain FE249_16640 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_16640 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_16640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FE249_16650 PF00563 EAL domain FE249_16650 PF00990 Diguanylate cyclase, GGDEF domain FE249_16650 PF13188 PAS domain FE249_16650 PF03707 Bacterial signalling protein N terminal repeat FE249_16660 PF08278 DNA primase DnaG DnaB-binding FE249_16660 PF01807 CHC2 zinc finger FE249_16660 PF10410 DnaB-helicase binding domain of primase FE249_16660 PF08275 DNA primase catalytic core, N-terminal domain FE249_16665 PF04546 Sigma-70, non-essential region FE249_16665 PF03979 Sigma-70 factor, region 1.1 FE249_16665 PF00140 Sigma-70 factor, region 1.2 FE249_16665 PF04542 Sigma-70 region 2 FE249_16665 PF04539 Sigma-70 region 3 FE249_16665 PF04545 Sigma-70, region 4 FE249_16675 PF00849 RNA pseudouridylate synthase FE249_16675 PF01479 S4 domain FE249_16680 PF00982 Glycosyltransferase family 20 FE249_16685 PF02358 Trehalose-phosphatase FE249_16695 PF02630 SCO1/SenC FE249_16710 PF02630 SCO1/SenC FE249_16715 PF02934 GatB/GatE catalytic domain FE249_16715 PF02637 GatB domain FE249_16720 PF01425 Amidase FE249_16725 PF02686 Glu-tRNAGln amidotransferase C subunit FE249_16730 PF03652 Holliday junction resolvase FE249_16745 PF00959 Phage lysozyme FE249_16785 PF05717 IS66 Orf2 like protein FE249_16790 PF13817 IS66 C-terminal element FE249_16790 PF03050 Transposase IS66 family FE249_16790 PF13007 Transposase C of IS166 homeodomain FE249_16790 PF13005 zinc-finger binding domain of transposase IS66 FE249_16805 PF01695 IstB-like ATP binding protein FE249_16810 PF00665 Integrase core domain FE249_16810 PF02796 Helix-turn-helix domain of resolvase FE249_16830 PF13356 Arm DNA-binding domain FE249_16830 PF00589 Phage integrase family FE249_16835 PF00117 Glutamine amidotransferase class-I FE249_16835 PF00958 GMP synthase C terminal domain FE249_16835 PF02540 NAD synthase FE249_16840 PF01738 Dienelactone hydrolase family FE249_16845 PF00293 NUDIX domain FE249_16855 PF03572 Peptidase family S41 FE249_16855 PF13180 PDZ domain FE249_16865 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FE249_16865 PF01676 Metalloenzyme superfamily FE249_16870 PF01026 TatD related DNase FE249_16875 PF12706 Beta-lactamase superfamily domain FE249_16880 PF02073 Thermophilic metalloprotease (M29) FE249_16885 PF00291 Pyridoxal-phosphate dependent enzyme FE249_16885 PF13291 ACT domain FE249_16890 PF01272 Transcription elongation factor, GreA/GreB, C-term FE249_16890 PF03449 Transcription elongation factor, N-terminal FE249_16895 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FE249_16895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE249_16895 PF02142 MGS-like domain FE249_16900 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FE249_16900 PF00117 Glutamine amidotransferase class-I FE249_16905 PF05188 MutS domain II FE249_16905 PF05192 MutS domain III FE249_16905 PF05190 MutS family domain IV FE249_16905 PF00488 MutS domain V FE249_16905 PF01624 MutS domain I FE249_16910 PF08335 GlnD PII-uridylyltransferase FE249_16910 PF01966 HD domain FE249_16925 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FE249_16925 PF05698 Bacterial trigger factor protein (TF) C-terminus FE249_16925 PF05697 Bacterial trigger factor protein (TF) FE249_16930 PF00574 Clp protease FE249_16935 PF07724 AAA domain (Cdc48 subfamily) FE249_16935 PF10431 C-terminal, D2-small domain, of ClpB protein FE249_16935 PF06689 ClpX C4-type zinc finger FE249_16940 PF02190 ATP-dependent protease La (LON) substrate-binding domain FE249_16940 PF00004 ATPase family associated with various cellular activities (AAA) FE249_16940 PF05362 Lon protease (S16) C-terminal proteolytic domain FE249_16945 PF00216 Bacterial DNA-binding protein FE249_16960 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FE249_16965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FE249_16970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FE249_16975 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FE249_16985 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FE249_16985 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FE249_16985 PF10531 SLBB domain FE249_16990 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FE249_16990 PF00384 Molybdopterin oxidoreductase FE249_16990 PF09326 NADH-ubiquinone oxidoreductase subunit G, C-terminal FE249_16995 PF00146 NADH dehydrogenase FE249_17000 PF12838 4Fe-4S dicluster domain FE249_17005 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FE249_17010 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FE249_17015 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FE249_17015 PF00361 Proton-conducting membrane transporter FE249_17020 PF00361 Proton-conducting membrane transporter FE249_17020 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus FE249_17025 PF00361 Proton-conducting membrane transporter FE249_17030 PF03099 Biotin/lipoate A/B protein ligase family FE249_17030 PF02237 Biotin protein ligase C terminal domain FE249_17035 PF03309 Type III pantothenate kinase FE249_17040 PF12706 Beta-lactamase superfamily domain FE249_17040 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FE249_17040 PF17770 Ribonuclease J C-terminal domain FE249_17045 PF01757 Acyltransferase family FE249_17050 PF03129 Anticodon binding domain FE249_17050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE249_17055 PF02687 FtsX-like permease family FE249_17055 PF12704 MacB-like periplasmic core domain FE249_17060 PF00005 ABC transporter FE249_17065 PF07859 alpha/beta hydrolase fold FE249_17070 PF06146 Phosphate-starvation-inducible E FE249_17075 PF00005 ABC transporter FE249_17075 PF16326 ABC transporter C-terminal domain FE249_17085 PF03372 Endonuclease/Exonuclease/phosphatase family FE249_17090 PF01521 Iron-sulphur cluster biosynthesis FE249_17095 PF01966 HD domain FE249_17095 PF13286 Phosphohydrolase-associated domain FE249_17100 PF03485 Arginyl tRNA synthetase N terminal domain FE249_17100 PF05746 DALR anticodon binding domain FE249_17100 PF00750 tRNA synthetases class I (R) FE249_17110 PF00933 Glycosyl hydrolase family 3 N terminal domain FE249_17115 PF02163 Peptidase family M50 FE249_17120 PF02616 Segregation and condensation protein ScpA FE249_17125 PF04079 Segregation and condensation complex subunit ScpB FE249_17130 PF02416 mttA/Hcf106 family FE249_17135 PF00902 Sec-independent protein translocase protein (TatC) FE249_17140 PF02403 Seryl-tRNA synthetase N-terminal domain FE249_17140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FE249_17145 PF00753 Metallo-beta-lactamase superfamily FE249_17150 PF04143 Sulphur transport FE249_17160 PF01022 Bacterial regulatory protein, arsR family FE249_17165 PF05690 Thiazole biosynthesis protein ThiG FE249_17175 PF01266 FAD dependent oxidoreductase FE249_17175 PF05690 Thiazole biosynthesis protein ThiG FE249_17180 PF13667 ThiC-associated domain FE249_17180 PF01964 Radical SAM ThiC family FE249_17185 PF00990 Diguanylate cyclase, GGDEF domain FE249_17185 PF00563 EAL domain FE249_17185 PF03707 Bacterial signalling protein N terminal repeat FE249_17185 PF13188 PAS domain FE249_17195 PF13406 Transglycosylase SLT domain FE249_17200 PF03330 Lytic transglycolase FE249_17200 PF05036 Sporulation related domain FE249_17205 PF02223 Thymidylate kinase FE249_17210 PF09115 DNA polymerase III, delta subunit, C terminal FE249_17215 PF08264 Anticodon-binding domain of tRNA FE249_17215 PF09334 tRNA synthetases class I (M) FE249_17220 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FE249_17220 PF02154 Flagellar motor switch protein FliM FE249_17235 PF00535 Glycosyl transferase family 2 FE249_17250 PF00149 Calcineurin-like phosphoesterase FE249_17255 PF00459 Inositol monophosphatase family FE249_17260 PF08402 TOBE domain FE249_17260 PF00005 ABC transporter FE249_17270 PF00528 Binding-protein-dependent transport system inner membrane component FE249_17290 PF00893 Small Multidrug Resistance protein FE249_17300 PF00528 Binding-protein-dependent transport system inner membrane component FE249_17305 PF00005 ABC transporter FE249_17305 PF00571 CBS domain FE249_17310 PF00171 Aldehyde dehydrogenase family FE249_17315 PF05199 GMC oxidoreductase FE249_17315 PF00732 GMC oxidoreductase FE249_17320 PF01266 FAD dependent oxidoreductase FE249_17325 PF04267 Sarcosine oxidase, delta subunit family FE249_17330 PF08669 Glycine cleavage T-protein C-terminal barrel domain FE249_17330 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_17330 PF01571 Aminomethyltransferase folate-binding domain FE249_17330 PF17806 Sarcosine oxidase A3 domain FE249_17340 PF03315 Serine dehydratase beta chain FE249_17340 PF03313 Serine dehydratase alpha chain FE249_17355 PF02754 Cysteine-rich domain FE249_17355 PF13183 4Fe-4S dicluster domain FE249_17360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FE249_17365 PF01965 DJ-1/PfpI family FE249_17365 PF12833 Helix-turn-helix domain FE249_17370 PF00970 Oxidoreductase FAD-binding domain FE249_17370 PF00175 Oxidoreductase NAD-binding domain FE249_17370 PF00111 2Fe-2S iron-sulfur cluster binding domain FE249_17375 PF00355 Rieske [2Fe-2S] domain FE249_17375 PF00848 Ring hydroxylating alpha subunit (catalytic domain) FE249_17380 PF01965 DJ-1/PfpI family FE249_17380 PF12833 Helix-turn-helix domain FE249_17385 PF00884 Sulfatase FE249_17385 PF12411 Choline sulfatase enzyme C terminal FE249_17390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_17390 PF03466 LysR substrate binding domain FE249_17395 PF08241 Methyltransferase domain FE249_17400 PF01842 ACT domain FE249_17400 PF00696 Amino acid kinase family FE249_17400 PF13840 ACT domain FE249_17405 PF03060 Nitronate monooxygenase FE249_17410 PF02896 PEP-utilising enzyme, TIM barrel domain FE249_17410 PF00391 PEP-utilising enzyme, mobile domain FE249_17410 PF05524 PEP-utilising enzyme, N-terminal FE249_17415 PF13464 Domain of unknown function (DUF4115) FE249_17420 PF04551 GcpE protein FE249_17425 PF03129 Anticodon binding domain FE249_17425 PF13393 Histidyl-tRNA synthetase FE249_17430 PF03462 PCRF domain FE249_17430 PF00472 RF-1 domain FE249_17435 PF13847 Methyltransferase domain FE249_17435 PF17827 PrmC N-terminal domain FE249_17455 PF03023 Lipid II flippase MurJ FE249_17460 PF00579 tRNA synthetases class I (W and Y) FE249_17465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FE249_17465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FE249_17465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FE249_17465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FE249_17470 PF00483 Nucleotidyl transferase FE249_17480 PF00561 alpha/beta hydrolase fold FE249_17485 PF02357 Transcription termination factor nusG FE249_17485 PF00467 KOW motif FE249_17515 PF02770 Acyl-CoA dehydrogenase, middle domain FE249_17515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FE249_17515 PF18158 Adaptive response protein AidB N-terminal domain FE249_17520 PF01263 Aldose 1-epimerase FE249_17545 PF13538 UvrD-like helicase C-terminal domain FE249_17545 PF14490 Helix-hairpin-helix containing domain FE249_17545 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FE249_17555 PF00154 recA bacterial DNA recombination protein FE249_17575 PF00872 Transposase, Mutator family FE249_17615 PF05598 Transposase domain (DUF772) FE249_17625 PF01381 Helix-turn-helix FE249_17635 PF00817 impB/mucB/samB family FE249_17635 PF11799 impB/mucB/samB family C-terminal domain FE249_17635 PF11798 IMS family HHH motif FE249_17635 PF13438 Domain of unknown function (DUF4113) FE249_17650 PF01548 Transposase FE249_17650 PF02371 Transposase IS116/IS110/IS902 family FE249_17670 PF00313 'Cold-shock' DNA-binding domain FE249_17690 PF13744 Helix-turn-helix domain FE249_17695 PF05973 Phage derived protein Gp49-like (DUF891) FE249_17705 PF00665 Integrase core domain FE249_17710 PF01695 IstB-like ATP binding protein FE249_17720 PF03466 LysR substrate binding domain FE249_17720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_17745 PF07690 Major Facilitator Superfamily FE249_17755 PF03061 Thioesterase superfamily FE249_17830 PF00437 Type II/IV secretion system protein FE249_17850 PF01381 Helix-turn-helix FE249_17855 PF13657 HipA N-terminal domain FE249_17855 PF07804 HipA-like C-terminal domain FE249_17895 PF00216 Bacterial DNA-binding protein FE249_17925 PF07282 Putative transposase DNA-binding domain FE249_17925 PF01385 Probable transposase FE249_17925 PF12323 Helix-turn-helix domain FE249_17955 PF00990 Diguanylate cyclase, GGDEF domain FE249_17955 PF00989 PAS fold FE249_17955 PF00563 EAL domain FE249_17955 PF01590 GAF domain FE249_18025 PF04055 Radical SAM superfamily FE249_18070 PF03477 ATP cone domain FE249_18070 PF02867 Ribonucleotide reductase, barrel domain FE249_18070 PF00317 Ribonucleotide reductase, all-alpha domain FE249_18125 PF00986 DNA gyrase B subunit, carboxyl terminus FE249_18125 PF01751 Toprim domain FE249_18125 PF00204 DNA gyrase B FE249_18125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_18150 PF13098 Thioredoxin-like domain FE249_18225 PF00437 Type II/IV secretion system protein FE249_18225 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FE249_18260 PF01551 Peptidase family M23 FE249_18260 PF10145 Phage-related minor tail protein FE249_18260 PF01464 Transglycosylase SLT domain FE249_18275 PF02511 Thymidylate synthase complementing protein FE249_18285 PF00268 Ribonucleotide reductase, small chain FE249_18295 PF10073 Uncharacterized protein conserved in bacteria (DUF2312) FE249_18300 PF04545 Sigma-70, region 4 FE249_18300 PF04542 Sigma-70 region 2 FE249_18300 PF00140 Sigma-70 factor, region 1.2 FE249_18305 PF00004 ATPase family associated with various cellular activities (AAA) FE249_18305 PF17862 AAA+ lid domain FE249_18305 PF06480 FtsH Extracellular FE249_18305 PF01434 Peptidase family M41 FE249_18315 PF02463 RecF/RecN/SMC N terminal domain FE249_18335 PF13538 UvrD-like helicase C-terminal domain FE249_18335 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FE249_18335 PF14490 Helix-hairpin-helix containing domain FE249_18355 PF07733 Bacterial DNA polymerase III alpha NTPase domain FE249_18355 PF02811 PHP domain FE249_18355 PF14579 Helix-hairpin-helix motif FE249_18355 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FE249_18360 PF13361 UvrD-like helicase C-terminal domain FE249_18360 PF00580 UvrD/REP helicase N-terminal domain FE249_18375 PF01966 HD domain FE249_18560 PF01541 GIY-YIG catalytic domain FE249_18675 PF03989 DNA gyrase C-terminal domain, beta-propeller FE249_18675 PF00521 DNA gyrase/topoisomerase IV, subunit A FE249_18680 PF11799 impB/mucB/samB family C-terminal domain FE249_18680 PF00817 impB/mucB/samB family FE249_18680 PF13438 Domain of unknown function (DUF4113) FE249_18680 PF11798 IMS family HHH motif FE249_18710 PF01464 Transglycosylase SLT domain FE249_18750 PF00692 dUTPase FE249_18755 PF01351 Ribonuclease HII FE249_18785 PF00075 RNase H FE249_18795 PF13614 AAA domain FE249_18815 PF00239 Resolvase, N terminal domain FE249_18815 PF02796 Helix-turn-helix domain of resolvase FE249_18820 PF01526 Tn3 transposase DDE domain FE249_18820 PF13700 Domain of unknown function (DUF4158) FE249_18845 PF07804 HipA-like C-terminal domain FE249_18885 PF11800 Replication protein C C-terminal region FE249_18885 PF03428 Replication protein C N-terminal domain FE249_18950 PF12323 Helix-turn-helix domain FE249_18950 PF01385 Probable transposase FE249_18950 PF07282 Putative transposase DNA-binding domain FE249_18955 PF07499 RuvA, C-terminal domain FE249_18955 PF01330 RuvA N terminal domain FE249_18960 PF05491 RuvB C-terminal winged helix domain FE249_18960 PF05496 Holliday junction DNA helicase RuvB P-loop domain FE249_18960 PF17864 RuvB AAA lid domain FE249_19105 PF02190 ATP-dependent protease La (LON) substrate-binding domain FE249_19105 PF00004 ATPase family associated with various cellular activities (AAA) FE249_19105 PF05362 Lon protease (S16) C-terminal proteolytic domain FE249_19120 PF08808 RES domain FE249_19150 PF03979 Sigma-70 factor, region 1.1 FE249_19150 PF04539 Sigma-70 region 3 FE249_19150 PF00140 Sigma-70 factor, region 1.2 FE249_19150 PF04545 Sigma-70, region 4 FE249_19150 PF04542 Sigma-70 region 2 FE249_19175 PF14490 Helix-hairpin-helix containing domain FE249_19175 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FE249_19175 PF13538 UvrD-like helicase C-terminal domain FE249_19185 PF00154 recA bacterial DNA recombination protein FE249_19210 PF00872 Transposase, Mutator family FE249_19230 PF00873 AcrB/AcrD/AcrF family FE249_19235 PF00581 Rhodanese-like domain FE249_19240 PF00581 Rhodanese-like domain FE249_19240 PF00753 Metallo-beta-lactamase superfamily FE249_19245 PF07690 Major Facilitator Superfamily FE249_19265 PF00403 Heavy-metal-associated domain FE249_19265 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_19265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FE249_19270 PF13411 MerR HTH family regulatory protein FE249_19280 PF13700 Domain of unknown function (DUF4158) FE249_19280 PF01526 Tn3 transposase DDE domain FE249_19285 PF00239 Resolvase, N terminal domain FE249_19285 PF02796 Helix-turn-helix domain of resolvase FE249_19300 PF01443 Viral (Superfamily 1) RNA helicase FE249_19300 PF03389 MobA/MobL family FE249_19300 PF17841 BID domain of Bartonella effector protein (Bep) FE249_19310 PF01850 PIN domain FE249_19330 PF13614 AAA domain FE249_19340 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FE249_19355 PF02796 Helix-turn-helix domain of resolvase FE249_19355 PF00239 Resolvase, N terminal domain FE249_19365 PF00486 Transcriptional regulatory protein, C terminal FE249_19365 PF00072 Response regulator receiver domain FE249_19370 PF00512 His Kinase A (phospho-acceptor) domain FE249_19370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FE249_19370 PF00672 HAMP domain FE249_19390 PF09344 CT1975-like protein FE249_19395 PF09704 CRISPR-associated protein (Cas_Cas5) FE249_19410 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) FE249_19445 PF01330 RuvA N terminal domain FE249_19445 PF07499 RuvA, C-terminal domain FE249_19500 PF00872 Transposase, Mutator family FE249_19505 PF00563 EAL domain FE249_19505 PF00990 Diguanylate cyclase, GGDEF domain FE249_19505 PF13188 PAS domain FE249_19505 PF03707 Bacterial signalling protein N terminal repeat FE249_19525 PF00239 Resolvase, N terminal domain FE249_19525 PF02796 Helix-turn-helix domain of resolvase FE249_19555 PF00155 Aminotransferase class I and II FE249_19555 PF00392 Bacterial regulatory proteins, gntR family FE249_19595 PF01546 Peptidase family M20/M25/M40 FE249_19625 PF07282 Putative transposase DNA-binding domain FE249_19625 PF01385 Probable transposase FE249_19625 PF12323 Helix-turn-helix domain FE249_19685 PF08808 RES domain FE249_19690 PF03979 Sigma-70 factor, region 1.1 FE249_19690 PF00140 Sigma-70 factor, region 1.2 FE249_19690 PF04539 Sigma-70 region 3 FE249_19690 PF04545 Sigma-70, region 4 FE249_19690 PF04542 Sigma-70 region 2 FE249_19695 PF01381 Helix-turn-helix FE249_19725 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase FE249_19725 PF09363 XFP C-terminal domain FE249_19725 PF09364 XFP N-terminal domain FE249_19760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FE249_19760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FE249_19760 PF00205 Thiamine pyrophosphate enzyme, central domain FE249_19765 PF01645 Conserved region in glutamate synthase FE249_19785 PF01276 Orn/Lys/Arg decarboxylase, major domain FE249_19785 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FE249_19785 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FE249_19790 PF02796 Helix-turn-helix domain of resolvase FE249_19790 PF00665 Integrase core domain FE249_19795 PF01695 IstB-like ATP binding protein FE249_19800 PF01638 HxlR-like helix-turn-helix FE249_19805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_19805 PF03466 LysR substrate binding domain FE249_19820 PF13610 DDE domain FE249_19830 PF13495 Phage integrase, N-terminal SAM-like domain FE249_19830 PF00589 Phage integrase family FE249_19835 PF00872 Transposase, Mutator family FE249_19850 PF00872 Transposase, Mutator family FE249_19880 PF00144 Beta-lactamase FE249_19900 PF08808 RES domain FE249_19905 PF09722 Protein of unknown function (DUF2384) FE249_19910 PF00075 RNase H FE249_19970 PF00665 Integrase core domain FE249_19970 PF02796 Helix-turn-helix domain of resolvase FE249_19975 PF01695 IstB-like ATP binding protein FE249_19990 PF00580 UvrD/REP helicase N-terminal domain FE249_19990 PF13361 UvrD-like helicase C-terminal domain FE249_20005 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FE249_20005 PF07733 Bacterial DNA polymerase III alpha NTPase domain FE249_20005 PF02811 PHP domain FE249_20005 PF01336 OB-fold nucleic acid binding domain FE249_20005 PF14579 Helix-hairpin-helix motif FE249_20015 PF14319 Transposase zinc-binding domain FE249_20015 PF04986 Putative transposase FE249_20030 PF05717 IS66 Orf2 like protein FE249_20035 PF13007 Transposase C of IS166 homeodomain FE249_20035 PF13005 zinc-finger binding domain of transposase IS66 FE249_20035 PF03050 Transposase IS66 family FE249_20035 PF13817 IS66 C-terminal element FE249_20045 PF02569 Pantoate-beta-alanine ligase FE249_20045 PF02224 Cytidylate kinase FE249_20050 PF00872 Transposase, Mutator family FE249_20060 PF03428 Replication protein C N-terminal domain FE249_20060 PF11800 Replication protein C C-terminal region FE249_20100 PF00271 Helicase conserved C-terminal domain FE249_20100 PF00270 DEAD/DEAH box helicase FE249_20100 PF18019 HD domain FE249_20115 PF01180 Dihydroorotate dehydrogenase FE249_20120 PF07992 Pyridine nucleotide-disulphide oxidoreductase FE249_20120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FE249_20125 PF00440 Bacterial regulatory proteins, tetR family FE249_20125 PF08362 YcdC-like protein, C-terminal region FE249_20130 PF01979 Amidohydrolase family FE249_20135 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FE249_20140 PF13610 DDE domain FE249_20150 PF00665 Integrase core domain FE249_20155 PF01695 IstB-like ATP binding protein FE249_20165 PF00596 Class II Aldolase and Adducin N-terminal domain FE249_20170 PF13407 Periplasmic binding protein domain FE249_20175 PF02653 Branched-chain amino acid transport system / permease component FE249_20180 PF00005 ABC transporter FE249_20185 PF01266 FAD dependent oxidoreductase FE249_20185 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FE249_20195 PF13685 Iron-containing alcohol dehydrogenase FE249_20200 PF04198 Putative sugar-binding domain FE249_20205 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FE249_20205 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FE249_20210 PF02534 Type IV secretory system Conjugative DNA transfer FE249_20215 PF00437 Type II/IV secretion system protein FE249_20225 PF03743 Bacterial conjugation TrbI-like protein FE249_20230 PF03524 Conjugal transfer protein FE249_20235 PF04335 VirB8 protein FE249_20245 PF04610 TrbL/VirB6 plasmid conjugal transfer protein FE249_20260 PF03135 CagE, TrbE, VirB family, component of type IV transporter system FE249_20265 PF05101 Type IV secretory pathway, VirB3-like protein FE249_20270 PF04956 TrbC/VIRB2 family FE249_20275 PF01464 Transglycosylase SLT domain FE249_20290 PF00857 Isochorismatase family FE249_20295 PF02538 Hydantoinase B/oxoprolinase FE249_20300 PF05378 Hydantoinase/oxoprolinase N-terminal region FE249_20300 PF01968 Hydantoinase/oxoprolinase FE249_20305 PF02515 CoA-transferase family III FE249_20310 PF00682 HMGL-like FE249_20315 PF00392 Bacterial regulatory proteins, gntR family FE249_20315 PF07729 FCD domain FE249_20330 PF07690 Major Facilitator Superfamily FE249_20340 PF00890 FAD binding domain FE249_20340 PF04205 FMN-binding domain FE249_20345 PF00694 Aconitase C-terminal domain FE249_20350 PF00330 Aconitase family (aconitate hydratase) FE249_20365 PF00857 Isochorismatase family FE249_20370 PF00682 HMGL-like FE249_20375 PF02515 CoA-transferase family III FE249_20380 PF01609 Transposase DDE domain FE249_20385 PF00872 Transposase, Mutator family FE249_20405 PF07702 UTRA domain FE249_20405 PF00392 Bacterial regulatory proteins, gntR family FE249_20410 PF13610 DDE domain FE249_20425 PF05717 IS66 Orf2 like protein FE249_20430 PF13005 zinc-finger binding domain of transposase IS66 FE249_20430 PF13007 Transposase C of IS166 homeodomain FE249_20430 PF13817 IS66 C-terminal element FE249_20430 PF03050 Transposase IS66 family FE249_20450 PF00691 OmpA family FE249_20485 PF00665 Integrase core domain FE249_20490 PF01695 IstB-like ATP binding protein FE249_20565 PF02195 ParB-like nuclease domain FE249_20565 PF07506 RepB plasmid partitioning protein FE249_20570 PF13614 AAA domain FE249_20570 PF00376 MerR family regulatory protein FE249_20595 PF11800 Replication protein C C-terminal region FE249_20595 PF03428 Replication protein C N-terminal domain FE249_20615 PF07704 Rv0623-like transcription factor FE249_20620 PF01850 PIN domain FE249_20635 PF08401 Domain of unknown function (DUF1738) FE249_20635 PF18818 Metallopeptidase superfamily domain FE249_20635 PF13362 Toprim domain FE249_20650 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FE249_20670 PF00239 Resolvase, N terminal domain FE249_20670 PF02796 Helix-turn-helix domain of resolvase FE249_20685 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE249_20685 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FE249_20685 PF02142 MGS-like domain FE249_20700 PF03050 Transposase IS66 family FE249_20700 PF13817 IS66 C-terminal element FE249_20700 PF13005 zinc-finger binding domain of transposase IS66 FE249_20700 PF13007 Transposase C of IS166 homeodomain FE249_20705 PF05717 IS66 Orf2 like protein FE249_20795 PF04055 Radical SAM superfamily FE249_20795 PF06968 Biotin and Thiamin Synthesis associated domain FE249_20805 PF02626 Carboxyltransferase domain, subdomain A and B FE249_20815 PF02785 Biotin carboxylase C-terminal domain FE249_20815 PF00289 Biotin carboxylase, N-terminal domain FE249_20815 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FE249_20825 PF03746 LamB/YcsF family FE249_20830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_20830 PF03466 LysR substrate binding domain FE249_20845 PF02492 CobW/HypB/UreG, nucleotide-binding domain FE249_20845 PF07683 Cobalamin synthesis protein cobW C-terminal domain FE249_20850 PF01522 Polysaccharide deacetylase FE249_20855 PF00106 short chain dehydrogenase FE249_20880 PF00202 Aminotransferase class-III FE249_20885 PF03466 LysR substrate binding domain FE249_20885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FE249_20915 PF02796 Helix-turn-helix domain of resolvase FE249_20915 PF00239 Resolvase, N terminal domain FE249_20930 PF00239 Resolvase, N terminal domain FE249_20930 PF02796 Helix-turn-helix domain of resolvase FE249_20940 PF01434 Peptidase family M41 FE249_20940 PF06480 FtsH Extracellular FE249_20940 PF17862 AAA+ lid domain FE249_20940 PF00004 ATPase family associated with various cellular activities (AAA) FE249_20955 PF13438 Domain of unknown function (DUF4113) FE249_20955 PF11798 IMS family HHH motif FE249_20955 PF11799 impB/mucB/samB family C-terminal domain FE249_20955 PF00817 impB/mucB/samB family FE249_20970 PF03428 Replication protein C N-terminal domain FE249_20970 PF11800 Replication protein C C-terminal region FE249_20985 PF07015 VirC1 protein FE249_21000 PF09019 EcoRII C terminal FE249_21000 PF09217 Restriction endonuclease EcoRII, N-terminal FE249_21005 PF03852 DNA mismatch endonuclease Vsr FE249_21010 PF18284 DNA methylase N-terminal domain FE249_21010 PF00145 C-5 cytosine-specific DNA methylase FE249_21020 PF01695 IstB-like ATP binding protein FE249_21025 PF00665 Integrase core domain FE249_21030 PF00872 Transposase, Mutator family