locus-tag class description PACID_00010 PF00308 Bacterial dnaA protein PACID_00010 PF08299 Bacterial dnaA protein helix-turn-helix PACID_00020 PF12704 MacB-like periplasmic core domain PACID_00020 PF00005 ABC transporter PACID_00020 PF02687 FtsX-like permease family PACID_00030 PF12704 MacB-like periplasmic core domain PACID_00030 PF02687 FtsX-like permease family PACID_00030 PF00005 ABC transporter PACID_00050 PF02767 DNA polymerase III beta subunit, central domain PACID_00050 PF02768 DNA polymerase III beta subunit, C-terminal domain PACID_00050 PF00712 DNA polymerase III beta subunit, N-terminal domain PACID_00070 PF02463 RecF/RecN/SMC N terminal domain PACID_00080 PF05258 Dna[CI] antecedent, DciA PACID_00100 PF00204 DNA gyrase B PACID_00100 PF00986 DNA gyrase B subunit, carboxyl terminus PACID_00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_00100 PF01751 Toprim domain PACID_00110 PF03989 DNA gyrase C-terminal domain, beta-propeller PACID_00110 PF00521 DNA gyrase/topoisomerase IV, subunit A PACID_00120 PF12089 Transmembrane domain of unknown function (DUF3566) PACID_00130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_00130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_00140 PF00356 Bacterial regulatory proteins, lacI family PACID_00150 PF00005 ABC transporter PACID_00160 PF02653 Branched-chain amino acid transport system / permease component PACID_00170 PF13407 Periplasmic binding protein domain PACID_00180 PF00294 pfkB family carbohydrate kinase PACID_00190 PF05025 RbsD / FucU transport protein family PACID_00200 PF01061 ABC-2 type transporter PACID_00210 PF00005 ABC transporter PACID_00210 PF13732 Domain of unknown function (DUF4162) PACID_00270 PF13744 Helix-turn-helix domain PACID_00280 PF01850 PIN domain PACID_00290 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PACID_00320 PF03600 Citrate transporter PACID_00340 PF13350 Tyrosine phosphatase family PACID_00350 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_00350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_00360 PF02837 Glycosyl hydrolases family 2, sugar binding domain PACID_00360 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PACID_00360 PF02929 Beta galactosidase small chain PACID_00360 PF16353 Domain of unknown function(DUF4981) PACID_00370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_00370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_00370 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_00380 PF03949 Malic enzyme, NAD binding domain PACID_00380 PF00390 Malic enzyme, N-terminal domain PACID_00390 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_00390 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_00400 PF00289 Biotin carboxylase, N-terminal domain PACID_00400 PF02785 Biotin carboxylase C-terminal domain PACID_00400 PF02436 Conserved carboxylase domain PACID_00400 PF00682 HMGL-like PACID_00400 PF00364 Biotin-requiring enzyme PACID_00400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_00460 PF03477 ATP cone domain PACID_00460 PF13597 Anaerobic ribonucleoside-triphosphate reductase PACID_00470 PF04055 Radical SAM superfamily PACID_00590 PF00005 ABC transporter PACID_00610 PF07726 ATPase family associated with various cellular activities (AAA) PACID_00610 PF17863 AAA lid domain PACID_00650 PF00092 von Willebrand factor type A domain PACID_00740 PF00872 Transposase, Mutator family PACID_00780 PF05973 Phage derived protein Gp49-like (DUF891) PACID_00810 PF00005 ABC transporter PACID_00820 PF01032 FecCD transport family PACID_00860 PF01522 Polysaccharide deacetylase PACID_00880 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_00900 PF00107 Zinc-binding dehydrogenase PACID_00900 PF08240 Alcohol dehydrogenase GroES-like domain PACID_00910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_00920 PF03611 PTS system sugar-specific permease component PACID_00960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_00960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_00970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PACID_00970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PACID_01020 PF00005 ABC transporter PACID_01040 PF10437 Bacterial lipoate protein ligase C-terminus PACID_01040 PF03099 Biotin/lipoate A/B protein ligase family PACID_01050 PF00113 Enolase, C-terminal TIM barrel domain PACID_01050 PF03952 Enolase, N-terminal domain PACID_01070 PF00528 Binding-protein-dependent transport system inner membrane component PACID_01080 PF00005 ABC transporter PACID_01090 PF00155 Aminotransferase class I and II PACID_01120 PF00528 Binding-protein-dependent transport system inner membrane component PACID_01140 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase PACID_01180 PF01380 SIS domain PACID_01250 PF00437 Type II/IV secretion system protein PACID_01320 PF00171 Aldehyde dehydrogenase family PACID_01340 PF02558 Ketopantoate reductase PanE/ApbA PACID_01340 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_01400 PF01268 Formate--tetrahydrofolate ligase PACID_01450 PF00005 ABC transporter PACID_01460 PF00072 Response regulator receiver domain PACID_01460 PF00196 Bacterial regulatory proteins, luxR family PACID_01480 PF01381 Helix-turn-helix PACID_01490 PF05973 Phage derived protein Gp49-like (DUF891) PACID_01500 PF01139 tRNA-splicing ligase RtcB PACID_01510 PF07690 Major Facilitator Superfamily PACID_01520 PF00005 ABC transporter PACID_01520 PF00664 ABC transporter transmembrane region PACID_01550 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase PACID_01570 PF00512 His Kinase A (phospho-acceptor) domain PACID_01570 PF00672 HAMP domain PACID_01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_01580 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase PACID_01590 PF07730 Histidine kinase PACID_01610 PF00512 His Kinase A (phospho-acceptor) domain PACID_01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_01610 PF00672 HAMP domain PACID_01620 PF00072 Response regulator receiver domain PACID_01620 PF00486 Transcriptional regulatory protein, C terminal PACID_01640 PF00394 Multicopper oxidase PACID_01640 PF07731 Multicopper oxidase PACID_01640 PF07732 Multicopper oxidase PACID_01680 PF00578 AhpC/TSA family PACID_01690 PF01370 NAD dependent epimerase/dehydratase family PACID_01710 PF01507 Phosphoadenosine phosphosulfate reductase family PACID_01720 PF01507 Phosphoadenosine phosphosulfate reductase family PACID_01730 PF00009 Elongation factor Tu GTP binding domain PACID_01740 PF01925 Sulfite exporter TauE/SafE PACID_01770 PF01546 Peptidase family M20/M25/M40 PACID_01770 PF07687 Peptidase dimerisation domain PACID_01800 PF00248 Aldo/keto reductase family PACID_01860 PF03330 Lytic transglycolase PACID_01870 PF00561 alpha/beta hydrolase fold PACID_01890 PF05690 Thiazole biosynthesis protein ThiG PACID_01900 PF00581 Rhodanese-like domain PACID_01900 PF00899 ThiF family PACID_01930 PF00440 Bacterial regulatory proteins, tetR family PACID_01950 PF03176 MMPL family PACID_01970 PF13439 Glycosyltransferase Family 4 PACID_01970 PF00534 Glycosyl transferases group 1 PACID_01990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_01990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_02000 PF00905 Penicillin binding protein transpeptidase domain PACID_02000 PF00912 Transglycosylase PACID_02020 PF07690 Major Facilitator Superfamily PACID_02040 PF07690 Major Facilitator Superfamily PACID_02050 PF06965 Na+/H+ antiporter 1 PACID_02060 PF01566 Natural resistance-associated macrophage protein PACID_02070 PF00950 ABC 3 transport family PACID_02070 PF02742 Iron dependent repressor, metal binding and dimerisation domain PACID_02100 PF00390 Malic enzyme, N-terminal domain PACID_02100 PF03949 Malic enzyme, NAD binding domain PACID_02140 PF00708 Acylphosphatase PACID_02150 PF08442 ATP-grasp domain PACID_02150 PF00549 CoA-ligase PACID_02160 PF01039 Carboxyl transferase domain PACID_02190 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit PACID_02200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_02200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_02200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_02200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_02220 PF00005 ABC transporter PACID_02230 PF00171 Aldehyde dehydrogenase family PACID_02270 PF00365 Phosphofructokinase PACID_02280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_02300 PF00528 Binding-protein-dependent transport system inner membrane component PACID_02300 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_02310 PF00528 Binding-protein-dependent transport system inner membrane component PACID_02350 PF04343 Protein of unknown function, DUF488 PACID_02370 PF00403 Heavy-metal-associated domain PACID_02390 PF00027 Cyclic nucleotide-binding domain PACID_02390 PF13545 Crp-like helix-turn-helix domain PACID_02400 PF00210 Ferritin-like domain PACID_02480 PF00583 Acetyltransferase (GNAT) family PACID_02510 PF13409 Glutathione S-transferase, N-terminal domain PACID_02530 PF00005 ABC transporter PACID_02530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_02550 PF00528 Binding-protein-dependent transport system inner membrane component PACID_02560 PF03459 TOBE domain PACID_02560 PF00005 ABC transporter PACID_02580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_02580 PF03459 TOBE domain PACID_02610 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PACID_02620 PF12804 MobA-like NTP transferase domain PACID_02630 PF03063 Prismane/CO dehydrogenase family PACID_02640 PF00111 2Fe-2S iron-sulfur cluster binding domain PACID_02640 PF00175 Oxidoreductase NAD-binding domain PACID_02640 PF00970 Oxidoreductase FAD-binding domain PACID_02650 PF01613 Flavin reductase like domain PACID_02660 PF00067 Cytochrome P450 PACID_02670 PF07690 Major Facilitator Superfamily PACID_02690 PF07690 Major Facilitator Superfamily PACID_02700 PF00384 Molybdopterin oxidoreductase PACID_02700 PF01568 Molydopterin dinucleotide binding domain PACID_02710 PF13247 4Fe-4S dicluster domain PACID_02710 PF14711 Respiratory nitrate reductase beta C-terminal PACID_02720 PF02665 Nitrate reductase gamma subunit PACID_02720 PF02613 Nitrate reductase delta subunit PACID_02720 PF00384 Molybdopterin oxidoreductase PACID_02730 PF00384 Molybdopterin oxidoreductase PACID_02730 PF02665 Nitrate reductase gamma subunit PACID_02730 PF02613 Nitrate reductase delta subunit PACID_02750 PF06463 Molybdenum Cofactor Synthesis C PACID_02750 PF04055 Radical SAM superfamily PACID_02770 PF02391 MoaE protein PACID_02780 PF03453 MoeA N-terminal region (domain I and II) PACID_02780 PF00994 Probable molybdopterin binding domain PACID_02780 PF03454 MoeA C-terminal region (domain IV) PACID_02790 PF01967 MoaC family PACID_02800 PF00994 Probable molybdopterin binding domain PACID_02800 PF01967 MoaC family PACID_02820 PF08543 Phosphomethylpyrimidine kinase PACID_02820 PF03070 TENA/THI-4/PQQC family PACID_02820 PF02581 Thiamine monophosphate synthase PACID_02830 PF02581 Thiamine monophosphate synthase PACID_02840 PF08450 SMP-30/Gluconolactonase/LRE-like region PACID_02870 PF02653 Branched-chain amino acid transport system / permease component PACID_02880 PF02653 Branched-chain amino acid transport system / permease component PACID_02890 PF00005 ABC transporter PACID_02900 PF13407 Periplasmic binding protein domain PACID_02910 PF00356 Bacterial regulatory proteins, lacI family PACID_02960 PF03577 Peptidase family C69 PACID_02970 PF00107 Zinc-binding dehydrogenase PACID_02970 PF08240 Alcohol dehydrogenase GroES-like domain PACID_02980 PF00171 Aldehyde dehydrogenase family PACID_03000 PF00356 Bacterial regulatory proteins, lacI family PACID_03010 PF02614 Glucuronate isomerase PACID_03020 PF01232 Mannitol dehydrogenase Rossmann domain PACID_03020 PF08125 Mannitol dehydrogenase C-terminal domain PACID_03030 PF03786 D-mannonate dehydratase (UxuA) PACID_03050 PF00248 Aldo/keto reductase family PACID_03070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PACID_03070 PF13378 Enolase C-terminal domain-like PACID_03110 PF02308 MgtC family PACID_03120 PF16874 Glycosyl hydrolase family 36 C-terminal domain PACID_03120 PF16875 Glycosyl hydrolase family 36 N-terminal domain PACID_03130 PF00356 Bacterial regulatory proteins, lacI family PACID_03140 PF03009 Glycerophosphoryl diester phosphodiesterase family PACID_03250 PF12137 RNA polymerase recycling family C-terminal PACID_03250 PF00176 SNF2 family N-terminal domain PACID_03250 PF18339 RapA N-terminal Tudor like domain 1 PACID_03250 PF18337 RapA N-terminal Tudor like domain PACID_03250 PF00271 Helicase conserved C-terminal domain PACID_03270 PF00270 DEAD/DEAH box helicase PACID_03270 PF00271 Helicase conserved C-terminal domain PACID_03270 PF08494 DEAD/H associated PACID_03290 PF00580 UvrD/REP helicase N-terminal domain PACID_03290 PF13361 UvrD-like helicase C-terminal domain PACID_03290 PF00570 HRDC domain PACID_03310 PF00665 Integrase core domain PACID_03320 PF00872 Transposase, Mutator family PACID_03370 PF00004 ATPase family associated with various cellular activities (AAA) PACID_03370 PF17866 AAA lid domain PACID_03380 PF02540 NAD synthase PACID_03380 PF00958 GMP synthase C terminal domain PACID_03380 PF00117 Glutamine amidotransferase class-I PACID_03400 PF00440 Bacterial regulatory proteins, tetR family PACID_03400 PF13305 Tetracyclin repressor-like, C-terminal domain PACID_03420 PF00561 alpha/beta hydrolase fold PACID_03470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_03470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_03480 PF00083 Sugar (and other) transporter PACID_03490 PF01261 Xylose isomerase-like TIM barrel PACID_03500 PF00480 ROK family PACID_03520 PF00795 Carbon-nitrogen hydrolase PACID_03540 PF00005 ABC transporter PACID_03550 PF00005 ABC transporter PACID_03550 PF02687 FtsX-like permease family PACID_03550 PF12704 MacB-like periplasmic core domain PACID_03580 PF13186 Iron-sulfur cluster-binding domain PACID_03580 PF04055 Radical SAM superfamily PACID_03590 PF00884 Sulfatase PACID_03590 PF12411 Choline sulfatase enzyme C terminal PACID_03640 PF00202 Aminotransferase class-III PACID_03660 PF01238 Phosphomannose isomerase type I PACID_03670 PF00294 pfkB family carbohydrate kinase PACID_03680 PF01614 Bacterial transcriptional regulator PACID_03680 PF09339 IclR helix-turn-helix domain PACID_03690 PF01081 KDPG and KHG aldolase PACID_03700 PF00356 Bacterial regulatory proteins, lacI family PACID_03710 PF01232 Mannitol dehydrogenase Rossmann domain PACID_03710 PF08125 Mannitol dehydrogenase C-terminal domain PACID_03720 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus PACID_03720 PF08666 SAF domain PACID_03730 PF02614 Glucuronate isomerase PACID_03800 PF02614 Glucuronate isomerase PACID_03810 PF08125 Mannitol dehydrogenase C-terminal domain PACID_03810 PF01232 Mannitol dehydrogenase Rossmann domain PACID_03860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_03860 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_03870 PF13936 Helix-turn-helix domain PACID_03870 PF00665 Integrase core domain PACID_03890 PF01370 NAD dependent epimerase/dehydratase family PACID_03910 PF02929 Beta galactosidase small chain PACID_03910 PF16353 Domain of unknown function(DUF4981) PACID_03910 PF00703 Glycosyl hydrolases family 2 PACID_03910 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PACID_03910 PF02837 Glycosyl hydrolases family 2, sugar binding domain PACID_03920 PF13580 SIS domain PACID_03930 PF00872 Transposase, Mutator family PACID_03960 PF00291 Pyridoxal-phosphate dependent enzyme PACID_03990 PF01695 IstB-like ATP binding protein PACID_04000 PF02374 Anion-transporting ATPase PACID_04010 PF01022 Bacterial regulatory protein, arsR family PACID_04020 PF06953 Arsenical resistance operon trans-acting repressor ArsD PACID_04100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_04100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_04110 PF00717 Peptidase S24-like PACID_04110 PF01381 Helix-turn-helix PACID_04130 PF09370 Phosphoenolpyruvate hydrolase-like PACID_04150 PF00392 Bacterial regulatory proteins, gntR family PACID_04150 PF07729 FCD domain PACID_04160 PF00107 Zinc-binding dehydrogenase PACID_04160 PF08240 Alcohol dehydrogenase GroES-like domain PACID_04170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_04170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_04180 PF00356 Bacterial regulatory proteins, lacI family PACID_04190 PF00356 Bacterial regulatory proteins, lacI family PACID_04200 PF00004 ATPase family associated with various cellular activities (AAA) PACID_04200 PF16193 AAA C-terminal domain PACID_04200 PF12002 MgsA AAA+ ATPase C terminal PACID_04230 PF00005 ABC transporter PACID_04250 PF07687 Peptidase dimerisation domain PACID_04250 PF01546 Peptidase family M20/M25/M40 PACID_04270 PF09335 SNARE associated Golgi protein PACID_04280 PF08240 Alcohol dehydrogenase GroES-like domain PACID_04280 PF00107 Zinc-binding dehydrogenase PACID_04310 PF02780 Transketolase, C-terminal domain PACID_04310 PF02779 Transketolase, pyrimidine binding domain PACID_04310 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PACID_04360 PF01595 Cyclin M transmembrane N-terminal domain PACID_04360 PF00571 CBS domain PACID_04370 PF00571 CBS domain PACID_04370 PF03471 Transporter associated domain PACID_04370 PF01595 Cyclin M transmembrane N-terminal domain PACID_04440 PF00743 Flavin-binding monooxygenase-like PACID_04490 PF01451 Low molecular weight phosphotyrosine protein phosphatase PACID_04570 PF00905 Penicillin binding protein transpeptidase domain PACID_04570 PF00912 Transglycosylase PACID_04610 PF00535 Glycosyl transferase family 2 PACID_04640 PF00534 Glycosyl transferases group 1 PACID_04640 PF13439 Glycosyltransferase Family 4 PACID_04650 PF00534 Glycosyl transferases group 1 PACID_04650 PF13439 Glycosyltransferase Family 4 PACID_04710 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_04710 PF14602 Hexapeptide repeat of succinyl-transferase PACID_04710 PF12804 MobA-like NTP transferase domain PACID_04720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PACID_04730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_04730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_04770 PF02378 Phosphotransferase system, EIIC PACID_04770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_04780 PF00294 pfkB family carbohydrate kinase PACID_04790 PF00455 DeoR C terminal sensor domain PACID_04790 PF08220 DeoR-like helix-turn-helix domain PACID_04800 PF00528 Binding-protein-dependent transport system inner membrane component PACID_04810 PF00528 Binding-protein-dependent transport system inner membrane component PACID_04820 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_04830 PF00005 ABC transporter PACID_04850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PACID_04850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PACID_04850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PACID_04880 PF02350 UDP-N-acetylglucosamine 2-epimerase PACID_04960 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_04970 PF00293 NUDIX domain PACID_04970 PF13344 Haloacid dehalogenase-like hydrolase PACID_04980 PF00270 DEAD/DEAH box helicase PACID_04980 PF08482 ATP-dependent helicase C-terminal PACID_04980 PF04408 Helicase associated domain (HA2) PACID_04980 PF00271 Helicase conserved C-terminal domain PACID_05010 PF02245 Methylpurine-DNA glycosylase (MPG) PACID_05040 PF00107 Zinc-binding dehydrogenase PACID_05040 PF08240 Alcohol dehydrogenase GroES-like domain PACID_05050 PF01047 MarR family PACID_05060 PF00255 Glutathione peroxidase PACID_05080 PF00085 Thioredoxin PACID_05090 PF06965 Na+/H+ antiporter 1 PACID_05090 PF13462 Thioredoxin PACID_05100 PF03796 DnaB-like helicase C terminal domain PACID_05100 PF00772 DnaB-like helicase N terminal domain PACID_05110 PF02583 Metal-sensitive transcriptional repressor PACID_05130 PF00403 Heavy-metal-associated domain PACID_05140 PF03330 Lytic transglycolase PACID_05160 PF01180 Dihydroorotate dehydrogenase PACID_05170 PF10371 Domain of unknown function PACID_05170 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PACID_05170 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PACID_05170 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PACID_05170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_05180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PACID_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_05200 PF07729 FCD domain PACID_05200 PF00392 Bacterial regulatory proteins, gntR family PACID_05220 PF02652 L-lactate permease PACID_05230 PF02754 Cysteine-rich domain PACID_05240 PF13183 4Fe-4S dicluster domain PACID_05240 PF02589 LUD domain PACID_05240 PF11870 Domain of unknown function (DUF3390) PACID_05250 PF02589 LUD domain PACID_05260 PF00005 ABC transporter PACID_05260 PF00664 ABC transporter transmembrane region PACID_05270 PF00664 ABC transporter transmembrane region PACID_05270 PF00005 ABC transporter PACID_05280 PF02322 Cytochrome bd terminal oxidase subunit II PACID_05290 PF01654 Cytochrome bd terminal oxidase subunit I PACID_05300 PF03965 Penicillinase repressor PACID_05310 PF00196 Bacterial regulatory proteins, luxR family PACID_05310 PF00072 Response regulator receiver domain PACID_05370 PF00465 Iron-containing alcohol dehydrogenase PACID_05380 PF01301 Glycosyl hydrolases family 35 PACID_05400 PF00528 Binding-protein-dependent transport system inner membrane component PACID_05410 PF00528 Binding-protein-dependent transport system inner membrane component PACID_05430 PF00356 Bacterial regulatory proteins, lacI family PACID_05440 PF00005 ABC transporter PACID_05440 PF00664 ABC transporter transmembrane region PACID_05450 PF00664 ABC transporter transmembrane region PACID_05450 PF00005 ABC transporter PACID_05460 PF00440 Bacterial regulatory proteins, tetR family PACID_05470 PF13419 Haloacid dehalogenase-like hydrolase PACID_05500 PF00696 Amino acid kinase family PACID_05520 PF06545 Protein of unknown function (DUF1116) PACID_05530 PF02629 CoA binding domain PACID_05530 PF00549 CoA-ligase PACID_05540 PF07729 FCD domain PACID_05540 PF00392 Bacterial regulatory proteins, gntR family PACID_05570 PF01546 Peptidase family M20/M25/M40 PACID_05570 PF07687 Peptidase dimerisation domain PACID_05580 PF00266 Aminotransferase class-V PACID_05590 PF01979 Amidohydrolase family PACID_05600 PF00375 Sodium:dicarboxylate symporter family PACID_05610 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PACID_05620 PF01177 Asp/Glu/Hydantoin racemase PACID_05630 PF01906 Putative heavy-metal-binding PACID_05640 PF01336 OB-fold nucleic acid binding domain PACID_05640 PF00152 tRNA synthetases class II (D, K and N) PACID_05650 PF06781 Cell division protein CrgA PACID_05670 PF00117 Glutamine amidotransferase class-I PACID_05680 PF03793 PASTA domain PACID_05680 PF00069 Protein kinase domain PACID_05690 PF00905 Penicillin binding protein transpeptidase domain PACID_05700 PF01098 Cell cycle protein PACID_05720 PF16697 Inner membrane component of T3SS, cytoplasmic domain PACID_05730 PF12401 Protein of unknown function (DUF2662) PACID_05730 PF00498 FHA domain PACID_05750 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PACID_05760 PF16363 GDP-mannose 4,6 dehydratase PACID_05770 PF00483 Nucleotidyl transferase PACID_05800 PF00107 Zinc-binding dehydrogenase PACID_05800 PF08240 Alcohol dehydrogenase GroES-like domain PACID_05810 PF02397 Bacterial sugar transferase PACID_05830 PF03816 Cell envelope-related transcriptional attenuator domain PACID_05850 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_05850 PF00128 Alpha amylase, catalytic domain PACID_05880 PF00128 Alpha amylase, catalytic domain PACID_05890 PF07690 Major Facilitator Superfamily PACID_05890 PF00083 Sugar (and other) transporter PACID_05900 PF03551 Transcriptional regulator PadR-like family PACID_05910 PF03109 ABC1 family PACID_05930 PF00324 Amino acid permease PACID_05950 PF17933 Tetracyclin repressor-like, C-terminal domain PACID_05950 PF00440 Bacterial regulatory proteins, tetR family PACID_05960 PF00005 ABC transporter PACID_05960 PF13732 Domain of unknown function (DUF4162) PACID_06030 PF12169 DNA polymerase III subunits gamma and tau domain III PACID_06040 PF02575 YbaB/EbfC DNA-binding family PACID_06050 PF13662 Toprim domain PACID_06050 PF02132 RecR protein PACID_06060 PF01910 Thiamine-binding protein PACID_06080 PF01301 Glycosyl hydrolases family 35 PACID_06100 PF00005 ABC transporter PACID_06100 PF12704 MacB-like periplasmic core domain PACID_06100 PF02687 FtsX-like permease family PACID_06150 PF08264 Anticodon-binding domain of tRNA PACID_06150 PF00133 tRNA synthetases class I (I, L, M and V) PACID_06180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_06200 PF00696 Amino acid kinase family PACID_06200 PF01842 ACT domain PACID_06200 PF13840 ACT domain PACID_06210 PF03023 Lipid II flippase MurJ PACID_06240 PF03741 Integral membrane protein TerC family PACID_06250 PF07690 Major Facilitator Superfamily PACID_06260 PF03466 LysR substrate binding domain PACID_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_06280 PF02040 Arsenical pump membrane protein PACID_06300 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PACID_06310 PF02537 CrcB-like protein, Camphor Resistance (CrcB) PACID_06340 PF00248 Aldo/keto reductase family PACID_06380 PF01161 Phosphatidylethanolamine-binding protein PACID_06400 PF08148 DSHCT (NUC185) domain PACID_06400 PF00270 DEAD/DEAH box helicase PACID_06400 PF00271 Helicase conserved C-terminal domain PACID_06420 PF00342 Phosphoglucose isomerase PACID_06440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PACID_06450 PF07690 Major Facilitator Superfamily PACID_06460 PF00248 Aldo/keto reductase family PACID_06470 PF03485 Arginyl tRNA synthetase N terminal domain PACID_06470 PF05746 DALR anticodon binding domain PACID_06470 PF00750 tRNA synthetases class I (R) PACID_06490 PF00480 ROK family PACID_06520 PF00083 Sugar (and other) transporter PACID_06550 PF00171 Aldehyde dehydrogenase family PACID_06560 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_06570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_06570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_06580 PF01261 Xylose isomerase-like TIM barrel PACID_06590 PF07690 Major Facilitator Superfamily PACID_06610 PF00356 Bacterial regulatory proteins, lacI family PACID_06650 PF07690 Major Facilitator Superfamily PACID_06690 PF00356 Bacterial regulatory proteins, lacI family PACID_06720 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_06720 PF00528 Binding-protein-dependent transport system inner membrane component PACID_06730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_06730 PF00005 ABC transporter PACID_06740 PF00206 Lyase PACID_06740 PF10415 Fumarase C C-terminus PACID_06750 PF08240 Alcohol dehydrogenase GroES-like domain PACID_06800 PF07690 Major Facilitator Superfamily PACID_06810 PF00440 Bacterial regulatory proteins, tetR family PACID_06830 PF01425 Amidase PACID_06840 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_06840 PF00005 ABC transporter PACID_06870 PF00005 ABC transporter PACID_06880 PF00440 Bacterial regulatory proteins, tetR family PACID_06900 PF16875 Glycosyl hydrolase family 36 N-terminal domain PACID_06900 PF16874 Glycosyl hydrolase family 36 C-terminal domain PACID_06910 PF01547 Bacterial extracellular solute-binding protein PACID_06920 PF00528 Binding-protein-dependent transport system inner membrane component PACID_06950 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PACID_06950 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PACID_06960 PF01263 Aldose 1-epimerase PACID_06980 PF05175 Methyltransferase small domain PACID_06990 PF03618 Kinase/pyrophosphorylase PACID_07000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PACID_07000 PF02896 PEP-utilising enzyme, TIM barrel domain PACID_07000 PF00391 PEP-utilising enzyme, mobile domain PACID_07040 PF01791 DeoC/LacD family aldolase PACID_07050 PF00672 HAMP domain PACID_07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_07050 PF00512 His Kinase A (phospho-acceptor) domain PACID_07060 PF00072 Response regulator receiver domain PACID_07060 PF00486 Transcriptional regulatory protein, C terminal PACID_07070 PF01384 Phosphate transporter family PACID_07090 PF00012 Hsp70 protein PACID_07100 PF01025 GrpE PACID_07110 PF00226 DnaJ domain PACID_07110 PF00684 DnaJ central domain PACID_07110 PF01556 DnaJ C terminal domain PACID_07120 PF13411 MerR HTH family regulatory protein PACID_07130 PF00107 Zinc-binding dehydrogenase PACID_07130 PF08240 Alcohol dehydrogenase GroES-like domain PACID_07140 PF03306 Alpha-acetolactate decarboxylase PACID_07150 PF06826 Predicted Permease Membrane Region PACID_07150 PF02080 TrkA-C domain PACID_07160 PF00324 Amino acid permease PACID_07190 PF00005 ABC transporter PACID_07190 PF12704 MacB-like periplasmic core domain PACID_07190 PF02687 FtsX-like permease family PACID_07230 PF00072 Response regulator receiver domain PACID_07230 PF00196 Bacterial regulatory proteins, luxR family PACID_07240 PF07730 Histidine kinase PACID_07280 PF00274 Fructose-bisphosphate aldolase class-I PACID_07290 PF00356 Bacterial regulatory proteins, lacI family PACID_07300 PF16874 Glycosyl hydrolase family 36 C-terminal domain PACID_07300 PF16875 Glycosyl hydrolase family 36 N-terminal domain PACID_07310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PACID_07330 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07340 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07360 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_07360 PF02861 Clp amino terminal domain, pathogenicity island component PACID_07360 PF17871 AAA lid domain PACID_07360 PF07724 AAA domain (Cdc48 subfamily) PACID_07360 PF00004 ATPase family associated with various cellular activities (AAA) PACID_07370 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07380 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07400 PF00294 pfkB family carbohydrate kinase PACID_07410 PF08220 DeoR-like helix-turn-helix domain PACID_07410 PF00455 DeoR C terminal sensor domain PACID_07420 PF02056 Family 4 glycosyl hydrolase PACID_07420 PF11975 Family 4 glycosyl hydrolase C-terminal domain PACID_07440 PF00011 Hsp20/alpha crystallin family PACID_07470 PF17926 Tetracyclin repressor-like, C-terminal domain PACID_07470 PF00440 Bacterial regulatory proteins, tetR family PACID_07480 PF05368 NmrA-like family PACID_07530 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_07530 PF18766 SWI2/SNF2 ATPase PACID_07530 PF11867 Domain of unknown function (DUF3387) PACID_07550 PF02384 N-6 DNA Methylase PACID_07620 PF00005 ABC transporter PACID_07620 PF00571 CBS domain PACID_07630 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07660 PF00155 Aminotransferase class I and II PACID_07660 PF00392 Bacterial regulatory proteins, gntR family PACID_07670 PF00005 ABC transporter PACID_07700 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07710 PF00571 CBS domain PACID_07710 PF00005 ABC transporter PACID_07720 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07730 PF00732 GMC oxidoreductase PACID_07730 PF05199 GMC oxidoreductase PACID_07750 PF00155 Aminotransferase class I and II PACID_07790 PF04011 LemA family PACID_07800 PF00294 pfkB family carbohydrate kinase PACID_07800 PF01467 Cytidylyltransferase-like PACID_07840 PF13439 Glycosyltransferase Family 4 PACID_07840 PF00534 Glycosyl transferases group 1 PACID_07890 PF13614 AAA domain PACID_07930 PF09335 SNARE associated Golgi protein PACID_07960 PF01116 Fructose-bisphosphate aldolase class-II PACID_07970 PF02436 Conserved carboxylase domain PACID_07970 PF00682 HMGL-like PACID_07980 PF01039 Carboxyl transferase domain PACID_07990 PF01039 Carboxyl transferase domain PACID_08000 PF00364 Biotin-requiring enzyme PACID_08010 PF00106 short chain dehydrogenase PACID_08020 PF05524 PEP-utilising enzyme, N-terminal PACID_08020 PF00391 PEP-utilising enzyme, mobile domain PACID_08020 PF02896 PEP-utilising enzyme, TIM barrel domain PACID_08030 PF00381 PTS HPr component phosphorylation site PACID_08040 PF00300 Histidine phosphatase superfamily (branch 1) PACID_08050 PF01895 PhoU domain PACID_08060 PF00512 His Kinase A (phospho-acceptor) domain PACID_08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_08070 PF00072 Response regulator receiver domain PACID_08070 PF00486 Transcriptional regulatory protein, C terminal PACID_08100 PF02559 CarD-like/TRCF domain PACID_08110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_08130 PF03611 PTS system sugar-specific permease component PACID_08150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PACID_08150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PACID_08170 PF04198 Putative sugar-binding domain PACID_08190 PF03612 Sorbitol phosphotransferase enzyme II N-terminus PACID_08190 PF07663 Sorbitol phosphotransferase enzyme II C-terminus PACID_08230 PF08240 Alcohol dehydrogenase GroES-like domain PACID_08230 PF00107 Zinc-binding dehydrogenase PACID_08240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_08240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_08240 PF01842 ACT domain PACID_08260 PF01116 Fructose-bisphosphate aldolase class-II PACID_08290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PACID_08300 PF02542 YgbB family PACID_08340 PF00464 Serine hydroxymethyltransferase PACID_08380 PF07690 Major Facilitator Superfamily PACID_08390 PF08241 Methyltransferase domain PACID_08400 PF00588 SpoU rRNA Methylase family PACID_08400 PF08032 RNA 2'-O ribose methyltransferase substrate binding PACID_08410 PF09190 DALR domain PACID_08410 PF01406 tRNA synthetases class I (C) catalytic domain PACID_08440 PF01053 Cys/Met metabolism PLP-dependent enzyme PACID_08450 PF03780 Asp23 family, cell envelope-related function PACID_08530 PF03459 TOBE domain PACID_08530 PF17912 MalK OB fold domain PACID_08530 PF00005 ABC transporter PACID_08560 PF07690 Major Facilitator Superfamily PACID_08580 PF13419 Haloacid dehalogenase-like hydrolase PACID_08600 PF03315 Serine dehydratase beta chain PACID_08600 PF03313 Serine dehydratase alpha chain PACID_08610 PF00480 ROK family PACID_08620 PF01547 Bacterial extracellular solute-binding protein PACID_08630 PF00528 Binding-protein-dependent transport system inner membrane component PACID_08640 PF00528 Binding-protein-dependent transport system inner membrane component PACID_08650 PF08240 Alcohol dehydrogenase GroES-like domain PACID_08650 PF00107 Zinc-binding dehydrogenase PACID_08660 PF00155 Aminotransferase class I and II PACID_08680 PF01661 Macro domain PACID_08690 PF00005 ABC transporter PACID_08710 PF07730 Histidine kinase PACID_08720 PF00196 Bacterial regulatory proteins, luxR family PACID_08720 PF00072 Response regulator receiver domain PACID_08730 PF00809 Pterin binding enzyme PACID_08740 PF00300 Histidine phosphatase superfamily (branch 1) PACID_08760 PF00005 ABC transporter PACID_08770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_08770 PF07730 Histidine kinase PACID_08770 PF00672 HAMP domain PACID_08780 PF00072 Response regulator receiver domain PACID_08780 PF00196 Bacterial regulatory proteins, luxR family PACID_08790 PF03186 CobD/Cbib protein PACID_08800 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_08800 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PACID_08810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08830 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PACID_08840 PF14824 Sirohaem biosynthesis protein central PACID_08840 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08840 PF10414 Sirohaem synthase dimerisation region PACID_08860 PF02570 Precorrin-8X methylmutase PACID_08870 PF01891 Cobalt uptake substrate-specific transmembrane region PACID_08880 PF02553 Cobalt transport protein component CbiN PACID_08890 PF02361 Cobalt transport protein PACID_08900 PF00005 ABC transporter PACID_08910 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08920 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PACID_08920 PF12557 Cob(I)alamin adenosyltransferase N terminal PACID_08930 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_08930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PACID_08940 PF10414 Sirohaem synthase dimerisation region PACID_08940 PF14824 Sirohaem biosynthesis protein central PACID_08940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08950 PF02571 Precorrin-6x reductase CbiJ/CobK PACID_08960 PF02277 Phosphoribosyltransferase PACID_08970 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PACID_08980 PF02654 Cobalamin-5-phosphate synthase PACID_09020 PF02664 S-Ribosylhomocysteinase (LuxS) PACID_09040 PF01238 Phosphomannose isomerase type I PACID_09060 PF00118 TCP-1/cpn60 chaperonin family PACID_09120 PF03932 CutC family PACID_09160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PACID_09170 PF00313 'Cold-shock' DNA-binding domain PACID_09200 PF00860 Permease family PACID_09240 PF00266 Aminotransferase class-V PACID_09250 PF01979 Amidohydrolase family PACID_09260 PF18357 Diphteria toxin repressor SH3 domain PACID_09260 PF02742 Iron dependent repressor, metal binding and dimerisation domain PACID_09260 PF01325 Iron dependent repressor, N-terminal DNA binding domain PACID_09270 PF01209 ubiE/COQ5 methyltransferase family PACID_09280 PF00085 Thioredoxin PACID_09290 PF00923 Transaldolase/Fructose-6-phosphate aldolase PACID_09300 PF00294 pfkB family carbohydrate kinase PACID_09320 PF04962 KduI/IolB family PACID_09330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_09330 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_09330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_09350 PF00356 Bacterial regulatory proteins, lacI family PACID_09360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_09360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_09370 PF00083 Sugar (and other) transporter PACID_09380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_09380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_09420 PF01741 Large-conductance mechanosensitive channel, MscL PACID_09450 PF01812 5-formyltetrahydrofolate cyclo-ligase family PACID_09510 PF01965 DJ-1/PfpI family PACID_09540 PF00155 Aminotransferase class I and II PACID_09560 PF13302 Acetyltransferase (GNAT) domain PACID_09570 PF00176 SNF2 family N-terminal domain PACID_09570 PF00271 Helicase conserved C-terminal domain PACID_09570 PF12419 SNF2 Helicase protein PACID_09620 PF00890 FAD binding domain PACID_09630 PF00440 Bacterial regulatory proteins, tetR family PACID_09650 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_09650 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_09680 PF00376 MerR family regulatory protein PACID_09680 PF09278 MerR, DNA binding PACID_09700 PF01965 DJ-1/PfpI family PACID_09730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PACID_09730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PACID_09740 PF00072 Response regulator receiver domain PACID_09740 PF00196 Bacterial regulatory proteins, luxR family PACID_09760 PF07859 alpha/beta hydrolase fold PACID_09790 PF05532 CsbD-like PACID_09810 PF03746 LamB/YcsF family PACID_09820 PF02682 Carboxyltransferase domain, subdomain C and D PACID_09830 PF00069 Protein kinase domain PACID_09840 PF00860 Permease family PACID_09850 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase PACID_09850 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase PACID_09860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_09870 PF01026 TatD related DNase PACID_09880 PF00398 Ribosomal RNA adenine dimethylase PACID_09890 PF08544 GHMP kinases C terminal PACID_09890 PF00288 GHMP kinases N terminal domain PACID_09900 PF01047 MarR family PACID_09910 PF00440 Bacterial regulatory proteins, tetR family PACID_09930 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_09930 PF12804 MobA-like NTP transferase domain PACID_09940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PACID_09940 PF14572 Phosphoribosyl synthetase-associated domain PACID_09950 PF14693 Ribosomal protein TL5, C-terminal domain PACID_09950 PF01386 Ribosomal L25p family PACID_09960 PF01195 Peptidyl-tRNA hydrolase PACID_09970 PF00271 Helicase conserved C-terminal domain PACID_09970 PF17757 UvrB interaction domain PACID_09970 PF00270 DEAD/DEAH box helicase PACID_09970 PF02559 CarD-like/TRCF domain PACID_09970 PF03461 TRCF domain PACID_09990 PF03819 MazG nucleotide pyrophosphohydrolase domain PACID_10000 PF00113 Enolase, C-terminal TIM barrel domain PACID_10000 PF03952 Enolase, N-terminal domain PACID_10030 PF02541 Ppx/GppA phosphatase family PACID_10050 PF04454 Encapsulating protein for peroxidase PACID_10060 PF04261 Dyp-type peroxidase family PACID_10070 PF00595 PDZ domain PACID_10070 PF13180 PDZ domain PACID_10120 PF00293 NUDIX domain PACID_10170 PF00707 Translation initiation factor IF-3, C-terminal domain PACID_10170 PF05198 Translation initiation factor IF-3, N-terminal domain PACID_10180 PF01632 Ribosomal protein L35 PACID_10190 PF00453 Ribosomal protein L20 PACID_10200 PF12105 SpoU, rRNA methylase, C-terminal PACID_10200 PF00588 SpoU rRNA Methylase family PACID_10220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PACID_10220 PF01409 tRNA synthetases class II core domain (F) PACID_10230 PF03483 B3/4 domain PACID_10230 PF03484 tRNA synthetase B5 domain PACID_10230 PF03147 Ferredoxin-fold anticodon binding domain PACID_10230 PF01588 Putative tRNA binding domain PACID_10230 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain PACID_10240 PF06968 Biotin and Thiamin Synthesis associated domain PACID_10240 PF04055 Radical SAM superfamily PACID_10250 PF00440 Bacterial regulatory proteins, tetR family PACID_10250 PF02909 Tetracyclin repressor-like, C-terminal domain PACID_10260 PF01316 Arginine repressor, DNA binding domain PACID_10260 PF02863 Arginine repressor, C-terminal domain PACID_10270 PF00579 tRNA synthetases class I (W and Y) PACID_10350 PF01625 Peptide methionine sulfoxide reductase PACID_10360 PF03167 Uracil DNA glycosylase superfamily PACID_10370 PF01594 AI-2E family transporter PACID_10390 PF01272 Transcription elongation factor, GreA/GreB, C-term PACID_10390 PF03449 Transcription elongation factor, N-terminal PACID_10420 PF03190 Protein of unknown function, DUF255 PACID_10430 PF01255 Putative undecaprenyl diphosphate synthase PACID_10440 PF03006 Haemolysin-III related PACID_10450 PF02562 PhoH-like protein PACID_10450 PF13638 PIN domain PACID_10470 PF02609 Exonuclease VII small subunit PACID_10480 PF02601 Exonuclease VII, large subunit PACID_10480 PF13742 OB-fold nucleic acid binding domain PACID_10490 PF02646 RmuC family PACID_10500 PF02127 Aminopeptidase I zinc metalloprotease (M18) PACID_10510 PF02687 FtsX-like permease family PACID_10510 PF12704 MacB-like periplasmic core domain PACID_10510 PF00005 ABC transporter PACID_10540 PF06071 Protein of unknown function (DUF933) PACID_10540 PF01926 50S ribosome-binding GTPase PACID_10550 PF02384 N-6 DNA Methylase PACID_10560 PF01420 Type I restriction modification DNA specificity domain PACID_10570 PF18766 SWI2/SNF2 ATPase PACID_10570 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_10570 PF11867 Domain of unknown function (DUF3387) PACID_10690 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB PACID_10700 PF01381 Helix-turn-helix PACID_10750 PF13732 Domain of unknown function (DUF4162) PACID_10750 PF00005 ABC transporter PACID_10760 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB PACID_10770 PF01381 Helix-turn-helix PACID_10870 PF00872 Transposase, Mutator family PACID_10910 PF03747 ADP-ribosylglycohydrolase PACID_10930 PF01636 Phosphotransferase enzyme family PACID_10940 PF00664 ABC transporter transmembrane region PACID_10940 PF00005 ABC transporter PACID_10950 PF00300 Histidine phosphatase superfamily (branch 1) PACID_10990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PACID_10990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PACID_11030 PF00196 Bacterial regulatory proteins, luxR family PACID_11030 PF00072 Response regulator receiver domain PACID_11040 PF00698 Acyl transferase domain PACID_11040 PF00550 Phosphopantetheine attachment site PACID_11040 PF14765 Polyketide synthase dehydratase PACID_11040 PF08659 KR domain PACID_11040 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_11040 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_11040 PF08240 Alcohol dehydrogenase GroES-like domain PACID_11040 PF16197 Ketoacyl-synthetase C-terminal extension PACID_11040 PF00107 Zinc-binding dehydrogenase PACID_11050 PF00083 Sugar (and other) transporter PACID_11060 PF00083 Sugar (and other) transporter PACID_11110 PF01842 ACT domain PACID_11120 PF07995 Glucose / Sorbosone dehydrogenase PACID_11140 PF08534 Redoxin PACID_11150 PF00324 Amino acid permease PACID_11160 PF02903 Alpha amylase, N-terminal ig-like domain PACID_11160 PF00128 Alpha amylase, catalytic domain PACID_11160 PF16657 Maltogenic Amylase, C-terminal domain PACID_11170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PACID_11170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PACID_11200 PF01642 Methylmalonyl-CoA mutase PACID_11210 PF01642 Methylmalonyl-CoA mutase PACID_11210 PF02310 B12 binding domain PACID_11260 PF00005 ABC transporter PACID_11270 PF00528 Binding-protein-dependent transport system inner membrane component PACID_11330 PF00950 ABC 3 transport family PACID_11340 PF00005 ABC transporter PACID_11380 PF00171 Aldehyde dehydrogenase family PACID_11390 PF00107 Zinc-binding dehydrogenase PACID_11390 PF08240 Alcohol dehydrogenase GroES-like domain PACID_11400 PF02733 Dak1 domain PACID_11400 PF02734 DAK2 domain PACID_11410 PF00156 Phosphoribosyl transferase domain PACID_11420 PF08220 DeoR-like helix-turn-helix domain PACID_11420 PF00455 DeoR C terminal sensor domain PACID_11430 PF02502 Ribose/Galactose Isomerase PACID_11450 PF13344 Haloacid dehalogenase-like hydrolase PACID_11460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_11460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_11470 PF01761 3-dehydroquinate synthase PACID_11480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_11480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_11490 PF02779 Transketolase, pyrimidine binding domain PACID_11490 PF02780 Transketolase, C-terminal domain PACID_11490 PF00456 Transketolase, thiamine diphosphate binding domain PACID_11550 PF07690 Major Facilitator Superfamily PACID_11560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PACID_11560 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch PACID_11560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PACID_11570 PF02233 NAD(P) transhydrogenase beta subunit PACID_11580 PF00144 Beta-lactamase PACID_11590 PF04294 VanW like protein PACID_11600 PF00037 4Fe-4S binding domain PACID_11610 PF00155 Aminotransferase class I and II PACID_11640 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PACID_11640 PF14602 Hexapeptide repeat of succinyl-transferase PACID_11650 PF07687 Peptidase dimerisation domain PACID_11650 PF01546 Peptidase family M20/M25/M40 PACID_11660 PF03641 Possible lysine decarboxylase PACID_11690 PF00534 Glycosyl transferases group 1 PACID_11690 PF13439 Glycosyltransferase Family 4 PACID_11700 PF00483 Nucleotidyl transferase PACID_11730 PF01596 O-methyltransferase PACID_11740 PF00701 Dihydrodipicolinate synthetase family PACID_11750 PF02416 mttA/Hcf106 family PACID_11760 PF10609 NUBPL iron-transfer P-loop NTPase PACID_11760 PF01883 Iron-sulfur cluster assembly protein PACID_11820 PF05195 Aminopeptidase P, N-terminal domain PACID_11820 PF00557 Metallopeptidase family M24 PACID_11850 PF00202 Aminotransferase class-III PACID_11860 PF00795 Carbon-nitrogen hydrolase PACID_11870 PF00324 Amino acid permease PACID_11900 PF01544 CorA-like Mg2+ transporter protein PACID_11910 PF00557 Metallopeptidase family M24 PACID_11930 PF00120 Glutamine synthetase, catalytic domain PACID_11930 PF03951 Glutamine synthetase, beta-Grasp domain PACID_11950 PF08335 GlnD PII-uridylyltransferase PACID_11950 PF03710 Glutamate-ammonia ligase adenylyltransferase PACID_11970 PF01784 NIF3 (NGG1p interacting factor 3) PACID_11990 PF01381 Helix-turn-helix PACID_12010 PF03951 Glutamine synthetase, beta-Grasp domain PACID_12010 PF00120 Glutamine synthetase, catalytic domain PACID_12040 PF13439 Glycosyltransferase Family 4 PACID_12040 PF00534 Glycosyl transferases group 1 PACID_12050 PF09335 SNARE associated Golgi protein PACID_12060 PF03448 MgtE intracellular N domain PACID_12060 PF01769 Divalent cation transporter PACID_12060 PF00571 CBS domain PACID_12070 PF00005 ABC transporter PACID_12070 PF12848 ABC transporter PACID_12070 PF16326 ABC transporter C-terminal domain PACID_12090 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family PACID_12090 PF04055 Radical SAM superfamily PACID_12100 PF00403 Heavy-metal-associated domain PACID_12110 PF05425 Copper resistance protein D PACID_12110 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) PACID_12120 PF03099 Biotin/lipoate A/B protein ligase family PACID_12130 PF02817 e3 binding domain PACID_12130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_12130 PF00364 Biotin-requiring enzyme PACID_12200 PF01521 Iron-sulphur cluster biosynthesis PACID_12210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PACID_12230 PF12270 Cytochrome c oxidase subunit IV PACID_12240 PF00478 IMP dehydrogenase / GMP reductase domain PACID_12240 PF00571 CBS domain PACID_12260 PF13631 Cytochrome b(N-terminal)/b6/petB PACID_12270 PF00355 Rieske [2Fe-2S] domain PACID_12280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PACID_12280 PF00034 Cytochrome c PACID_12290 PF00510 Cytochrome c oxidase subunit III PACID_12310 PF00591 Glycosyl transferase family, a/b domain PACID_12310 PF02885 Glycosyl transferase family, helical bundle domain PACID_12350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PACID_12380 PF00929 Exonuclease PACID_12380 PF01541 GIY-YIG catalytic domain PACID_12400 PF00877 NlpC/P60 family PACID_12410 PF00480 ROK family PACID_12450 PF00072 Response regulator receiver domain PACID_12450 PF00196 Bacterial regulatory proteins, luxR family PACID_12460 PF01474 Class-II DAHP synthetase family PACID_12490 PF03793 PASTA domain PACID_12490 PF00069 Protein kinase domain PACID_12510 PF02581 Thiamine monophosphate synthase PACID_12530 PF02219 Methylenetetrahydrofolate reductase PACID_12540 PF00570 HRDC domain PACID_12540 PF13361 UvrD-like helicase C-terminal domain PACID_12590 PF00005 ABC transporter PACID_12600 PF12697 Alpha/beta hydrolase family PACID_12610 PF00011 Hsp20/alpha crystallin family PACID_12620 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PACID_12620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PACID_12630 PF02447 GntP family permease PACID_12650 PF07729 FCD domain PACID_12650 PF00392 Bacterial regulatory proteins, gntR family PACID_12660 PF01061 ABC-2 type transporter PACID_12670 PF01061 ABC-2 type transporter PACID_12680 PF00005 ABC transporter PACID_12690 PF02347 Glycine cleavage system P-protein PACID_12700 PF01597 Glycine cleavage H-protein PACID_12710 PF01571 Aminomethyltransferase folate-binding domain PACID_12710 PF08669 Glycine cleavage T-protein C-terminal barrel domain PACID_12730 PF11992 Domain of unknown function (DUF3488) PACID_12730 PF13559 Domain of unknown function (DUF4129) PACID_12730 PF01841 Transglutaminase-like superfamily PACID_12750 PF07726 ATPase family associated with various cellular activities (AAA) PACID_12750 PF17863 AAA lid domain PACID_12760 PF02381 MraZ protein, putative antitoxin-like PACID_12770 PF01795 MraW methylase family PACID_12790 PF00905 Penicillin binding protein transpeptidase domain PACID_12790 PF03717 Penicillin-binding Protein dimerisation domain PACID_12800 PF02875 Mur ligase family, glutamate ligase domain PACID_12800 PF01225 Mur ligase family, catalytic domain PACID_12800 PF08245 Mur ligase middle domain PACID_12810 PF02875 Mur ligase family, glutamate ligase domain PACID_12810 PF01225 Mur ligase family, catalytic domain PACID_12810 PF08245 Mur ligase middle domain PACID_12820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PACID_12820 PF00953 Glycosyl transferase family 4 PACID_12830 PF02875 Mur ligase family, glutamate ligase domain PACID_12830 PF08245 Mur ligase middle domain PACID_12840 PF01098 Cell cycle protein PACID_12850 PF04101 Glycosyltransferase family 28 C-terminal domain PACID_12850 PF03033 Glycosyltransferase family 28 N-terminal domain PACID_12860 PF02875 Mur ligase family, glutamate ligase domain PACID_12860 PF08245 Mur ligase middle domain PACID_12860 PF01225 Mur ligase family, catalytic domain PACID_12870 PF08478 POTRA domain, FtsQ-type PACID_12870 PF03799 Cell division protein FtsQ PACID_12880 PF00091 Tubulin/FtsZ family, GTPase domain PACID_12880 PF12327 FtsZ family, C-terminal domain PACID_12900 PF04472 Cell division protein SepF PACID_12930 PF01258 Prokaryotic dksA/traR C4-type zinc finger PACID_12940 PF01252 Signal peptidase (SPase) II PACID_12950 PF00849 RNA pseudouridylate synthase PACID_12960 PF02887 Pyruvate kinase, alpha/beta domain PACID_12960 PF00224 Pyruvate kinase, barrel domain PACID_12980 PF00072 Response regulator receiver domain PACID_12980 PF03861 ANTAR domain PACID_12990 PF03061 Thioesterase superfamily PACID_13000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_13010 PF00476 DNA polymerase family A PACID_13010 PF01367 5'-3' exonuclease, C-terminal SAM fold PACID_13010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PACID_13040 PF00575 S1 RNA binding domain PACID_13050 PF01121 Dephospho-CoA kinase PACID_13080 PF04851 Type III restriction enzyme, res subunit PACID_13080 PF02151 UvrB/uvrC motif PACID_13080 PF00271 Helicase conserved C-terminal domain PACID_13080 PF12344 Ultra-violet resistance protein B PACID_13080 PF17757 UvrB interaction domain PACID_13090 PF03741 Integral membrane protein TerC family PACID_13110 PF00005 ABC transporter PACID_13110 PF17760 UvrA interaction domain PACID_13110 PF17755 UvrA DNA-binding domain PACID_13150 PF08459 UvrC Helix-hairpin-helix N-terminal PACID_13150 PF02151 UvrB/uvrC motif PACID_13150 PF01541 GIY-YIG catalytic domain PACID_13160 PF03668 P-loop ATPase protein family PACID_13170 PF01933 Uncharacterised protein family UPF0052 PACID_13180 PF14527 WhiA LAGLIDADG-like domain PACID_13180 PF02650 WhiA C-terminal HTH domain PACID_13180 PF10298 WhiA N-terminal LAGLIDADG-like domain PACID_13190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PACID_13190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PACID_13200 PF00162 Phosphoglycerate kinase PACID_13210 PF00121 Triosephosphate isomerase PACID_13220 PF03840 Preprotein translocase SecG subunit PACID_13240 PF02875 Mur ligase family, glutamate ligase domain PACID_13240 PF08245 Mur ligase middle domain PACID_13260 PF00334 Nucleoside diphosphate kinase PACID_13280 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_13280 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_13300 PF10150 Ribonuclease E/G family PACID_13310 PF00829 Ribosomal prokaryotic L21 protein PACID_13320 PF01016 Ribosomal L27 protein PACID_13340 PF09269 Domain of unknown function (DUF1967) PACID_13340 PF01018 GTP1/OBG PACID_13340 PF01926 50S ribosome-binding GTPase PACID_13350 PF00696 Amino acid kinase family PACID_13350 PF01472 PUA domain PACID_13360 PF00171 Aldehyde dehydrogenase family PACID_13380 PF01467 Cytidylyltransferase-like PACID_13400 PF00300 Histidine phosphatase superfamily (branch 1) PACID_13470 PF01810 LysE type translocator PACID_13480 PF01037 Lrp/AsnC ligand binding domain PACID_13560 PF00005 ABC transporter PACID_13660 PF00709 Adenylosuccinate synthetase PACID_13720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_13740 PF01323 DSBA-like thioredoxin domain PACID_13770 PF09334 tRNA synthetases class I (M) PACID_13770 PF00133 tRNA synthetases class I (I, L, M and V) PACID_13770 PF13603 Leucyl-tRNA synthetase, Domain 2 PACID_13770 PF08264 Anticodon-binding domain of tRNA PACID_13790 PF00753 Metallo-beta-lactamase superfamily PACID_13790 PF13567 Domain of unknown function (DUF4131) PACID_13790 PF03772 Competence protein PACID_13800 PF04851 Type III restriction enzyme, res subunit PACID_13820 PF01649 Ribosomal protein S20 PACID_13830 PF00128 Alpha amylase, catalytic domain PACID_13840 PF06421 GTP-binding protein LepA C-terminus PACID_13840 PF00009 Elongation factor Tu GTP binding domain PACID_13840 PF00679 Elongation factor G C-terminus PACID_13840 PF03144 Elongation factor Tu domain 2 PACID_13880 PF13378 Enolase C-terminal domain-like PACID_13880 PF18374 Enolase N-terminal domain-like PACID_13890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_13890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_13900 PF00425 chorismate binding enzyme PACID_13910 PF00501 AMP-binding enzyme PACID_13910 PF13193 AMP-binding enzyme C-terminal domain PACID_13920 PF00378 Enoyl-CoA hydratase/isomerase PACID_13930 PF01694 Rhomboid family PACID_13940 PF13193 AMP-binding enzyme C-terminal domain PACID_13940 PF00501 AMP-binding enzyme PACID_13940 PF16177 Acetyl-coenzyme A synthetase N-terminus PACID_13950 PF13193 AMP-binding enzyme C-terminal domain PACID_13950 PF16177 Acetyl-coenzyme A synthetase N-terminus PACID_13950 PF00501 AMP-binding enzyme PACID_13970 PF00005 ABC transporter PACID_13970 PF13732 Domain of unknown function (DUF4162) PACID_13980 PF17754 MftR C-terminal domain PACID_13980 PF00440 Bacterial regulatory proteins, tetR family PACID_13990 PF07690 Major Facilitator Superfamily PACID_13990 PF00083 Sugar (and other) transporter PACID_14000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PACID_14000 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_14010 PF00528 Binding-protein-dependent transport system inner membrane component PACID_14020 PF00528 Binding-protein-dependent transport system inner membrane component PACID_14040 PF04055 Radical SAM superfamily PACID_14060 PF00459 Inositol monophosphatase family PACID_14090 PF08220 DeoR-like helix-turn-helix domain PACID_14090 PF01628 HrcA protein C terminal domain PACID_14100 PF01556 DnaJ C terminal domain PACID_14100 PF00226 DnaJ domain PACID_14100 PF00684 DnaJ central domain PACID_14110 PF04452 RNA methyltransferase PACID_14120 PF08240 Alcohol dehydrogenase GroES-like domain PACID_14120 PF00107 Zinc-binding dehydrogenase PACID_14130 PF02378 Phosphotransferase system, EIIC PACID_14130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_14130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_14150 PF00270 DEAD/DEAH box helicase PACID_14150 PF00271 Helicase conserved C-terminal domain PACID_14150 PF00570 HRDC domain PACID_14150 PF16124 RecQ zinc-binding PACID_14150 PF09382 RQC domain PACID_14160 PF14602 Hexapeptide repeat of succinyl-transferase PACID_14160 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_14160 PF12804 MobA-like NTP transferase domain PACID_14170 PF00892 EamA-like transporter family PACID_14180 PF01702 Queuine tRNA-ribosyltransferase PACID_14190 PF07730 Histidine kinase PACID_14190 PF17200 Single Cache domain 2 PACID_14200 PF00196 Bacterial regulatory proteins, luxR family PACID_14200 PF00072 Response regulator receiver domain PACID_14210 PF00005 ABC transporter PACID_14210 PF13732 Domain of unknown function (DUF4162) PACID_14260 PF00561 alpha/beta hydrolase fold PACID_14290 PF01209 ubiE/COQ5 methyltransferase family PACID_14310 PF02562 PhoH-like protein PACID_14330 PF02130 Uncharacterized protein family UPF0054 PACID_14340 PF00571 CBS domain PACID_14340 PF01595 Cyclin M transmembrane N-terminal domain PACID_14340 PF03471 Transporter associated domain PACID_14350 PF07650 KH domain PACID_14350 PF01926 50S ribosome-binding GTPase PACID_14360 PF07969 Amidohydrolase family PACID_14380 PF08502 LeuA allosteric (dimerisation) domain PACID_14380 PF00682 HMGL-like PACID_14390 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_14400 PF00528 Binding-protein-dependent transport system inner membrane component PACID_14410 PF00528 Binding-protein-dependent transport system inner membrane component PACID_14430 PF01255 Putative undecaprenyl diphosphate synthase PACID_14450 PF00082 Subtilase family PACID_14460 PF11967 Recombination protein O N terminal PACID_14460 PF02565 Recombination protein O C terminal PACID_14470 PF08240 Alcohol dehydrogenase GroES-like domain PACID_14470 PF00107 Zinc-binding dehydrogenase PACID_14480 PF06100 MCRA family PACID_14490 PF00248 Aldo/keto reductase family PACID_14540 PF02796 Helix-turn-helix domain of resolvase PACID_14540 PF00239 Resolvase, N terminal domain PACID_14780 PF05257 CHAP domain PACID_14780 PF01476 LysM domain PACID_14840 PF12728 Helix-turn-helix domain PACID_14840 PF02661 Fic/DOC family PACID_14890 PF17863 AAA lid domain PACID_14890 PF07726 ATPase family associated with various cellular activities (AAA) PACID_14900 PF01882 Protein of unknown function DUF58 PACID_14910 PF13519 von Willebrand factor type A domain PACID_14910 PF07584 Aerotolerance regulator N-terminal PACID_14920 PF07584 Aerotolerance regulator N-terminal PACID_14920 PF13519 von Willebrand factor type A domain PACID_14930 PF01168 Alanine racemase, N-terminal domain PACID_14950 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_14950 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_14960 PF00550 Phosphopantetheine attachment site PACID_14970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PACID_14970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PACID_14980 PF00698 Acyl transferase domain PACID_14990 PF02558 Ketopantoate reductase PanE/ApbA PACID_14990 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_15010 PF17853 GGDEF-like domain PACID_15010 PF13556 PucR C-terminal helix-turn-helix domain PACID_15020 PF00456 Transketolase, thiamine diphosphate binding domain PACID_15020 PF17831 Pyruvate dehydrogenase E1 component middle domain PACID_15030 PF11253 Protein of unknown function (DUF3052) PACID_15040 PF00248 Aldo/keto reductase family PACID_15060 PF00156 Phosphoribosyl transferase domain PACID_15070 PF01979 Amidohydrolase family PACID_15080 PF00117 Glutamine amidotransferase class-I PACID_15080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PACID_15090 PF02142 MGS-like domain PACID_15090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_15090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PACID_15100 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PACID_15100 PF00175 Oxidoreductase NAD-binding domain PACID_15110 PF01180 Dihydroorotate dehydrogenase PACID_15120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PACID_15130 PF00156 Phosphoribosyl transferase domain PACID_15160 PF01230 HIT domain PACID_15190 PF00919 Uncharacterized protein family UPF0004 PACID_15190 PF18693 TRAM domain PACID_15190 PF04055 Radical SAM superfamily PACID_15210 PF02464 Competence-damaged protein PACID_15210 PF00994 Probable molybdopterin binding domain PACID_15210 PF18146 Damage-inducible protein CinA KH domain PACID_15230 PF00455 DeoR C terminal sensor domain PACID_15230 PF08220 DeoR-like helix-turn-helix domain PACID_15250 PF00154 recA bacterial DNA recombination protein PACID_15270 PF01966 HD domain PACID_15270 PF00013 KH domain PACID_15270 PF12072 Domain of unknown function (DUF3552) PACID_15280 PF01263 Aldose 1-epimerase PACID_15290 PF04055 Radical SAM superfamily PACID_15290 PF00919 Uncharacterized protein family UPF0004 PACID_15790 PF00872 Transposase, Mutator family PACID_15950 PF01678 Diaminopimelate epimerase PACID_15960 PF13167 GTP-binding GTPase N-terminal PACID_15960 PF01926 50S ribosome-binding GTPase PACID_15960 PF16360 GTP-binding GTPase Middle Region PACID_15970 PF13307 Helicase C-terminal domain PACID_16000 PF03477 ATP cone domain PACID_16010 PF08471 Class II vitamin B12-dependent ribonucleotide reductase PACID_16010 PF02867 Ribonucleotide reductase, barrel domain PACID_16020 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) PACID_16060 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PACID_16060 PF04408 Helicase associated domain (HA2) PACID_16060 PF11898 Domain of unknown function (DUF3418) PACID_16060 PF00270 DEAD/DEAH box helicase PACID_16060 PF00271 Helicase conserved C-terminal domain PACID_16070 PF04545 Sigma-70, region 4 PACID_16070 PF04539 Sigma-70 region 3 PACID_16070 PF04542 Sigma-70 region 2 PACID_16070 PF00140 Sigma-70 factor, region 1.2 PACID_16080 PF00140 Sigma-70 factor, region 1.2 PACID_16080 PF04545 Sigma-70, region 4 PACID_16080 PF04542 Sigma-70 region 2 PACID_16080 PF04539 Sigma-70 region 3 PACID_16110 PF01751 Toprim domain PACID_16110 PF00204 DNA gyrase B PACID_16110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_16110 PF00986 DNA gyrase B subunit, carboxyl terminus PACID_16140 PF00484 Carbonic anhydrase PACID_16150 PF00521 DNA gyrase/topoisomerase IV, subunit A PACID_16150 PF03989 DNA gyrase C-terminal domain, beta-propeller PACID_16180 PF03169 OPT oligopeptide transporter protein PACID_16210 PF11268 Protein of unknown function (DUF3071) PACID_16250 PF00692 dUTPase PACID_16280 PF02254 TrkA-N domain PACID_16280 PF02080 TrkA-C domain PACID_16290 PF02254 TrkA-N domain PACID_16290 PF02080 TrkA-C domain PACID_16300 PF13520 Amino acid permease PACID_16310 PF05958 tRNA (Uracil-5-)-methyltransferase PACID_16310 PF01938 TRAM domain PACID_16330 PF00330 Aconitase family (aconitate hydratase) PACID_16330 PF00694 Aconitase C-terminal domain PACID_16340 PF02780 Transketolase, C-terminal domain PACID_16340 PF02779 Transketolase, pyrimidine binding domain PACID_16340 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PACID_16370 PF01641 SelR domain PACID_16380 PF03976 Polyphosphate kinase 2 (PPK2) PACID_16440 PF01522 Polysaccharide deacetylase PACID_16440 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain PACID_16510 PF00107 Zinc-binding dehydrogenase PACID_16510 PF08240 Alcohol dehydrogenase GroES-like domain PACID_16520 PF03129 Anticodon binding domain PACID_16520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PACID_16520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_16530 PF01230 HIT domain PACID_16550 PF03279 Bacterial lipid A biosynthesis acyltransferase PACID_16560 PF13439 Glycosyltransferase Family 4 PACID_16580 PF05949 Bacterial protein of unknown function (DUF881) PACID_16590 PF06947 Protein of unknown function (DUF1290) PACID_16600 PF05949 Bacterial protein of unknown function (DUF881) PACID_16610 PF01597 Glycine cleavage H-protein PACID_16620 PF00498 FHA domain PACID_16630 PF00376 MerR family regulatory protein PACID_16640 PF02577 Bifunctional nuclease PACID_16650 PF13411 MerR HTH family regulatory protein PACID_16660 PF03631 Virulence factor BrkB PACID_16670 PF00365 Phosphofructokinase PACID_16690 PF01300 Telomere recombination PACID_16700 PF01048 Phosphorylase superfamily PACID_16710 PF00781 Diacylglycerol kinase catalytic domain PACID_16730 PF01205 Uncharacterized protein family UPF0029 PACID_16730 PF09186 Domain of unknown function (DUF1949) PACID_16760 PF00012 Hsp70 protein PACID_16780 PF03167 Uracil DNA glycosylase superfamily PACID_16800 PF00535 Glycosyl transferase family 2 PACID_16800 PF07238 PilZ domain PACID_16830 PF13520 Amino acid permease PACID_16880 PF02554 Carbon starvation protein CstA PACID_16880 PF13722 5TM C-terminal transporter carbon starvation CstA PACID_16890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_16890 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_16910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PACID_16920 PF08543 Phosphomethylpyrimidine kinase PACID_16940 PF13397 RNA polymerase-binding protein PACID_16950 PF00535 Glycosyl transferase family 2 PACID_16960 PF00795 Carbon-nitrogen hydrolase PACID_16970 PF01037 Lrp/AsnC ligand binding domain PACID_16980 PF00561 alpha/beta hydrolase fold PACID_16980 PF07021 Methionine biosynthesis protein MetW PACID_16990 PF00561 alpha/beta hydrolase fold PACID_17000 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PACID_17000 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PACID_17010 PF00248 Aldo/keto reductase family PACID_17110 PF07804 HipA-like C-terminal domain PACID_17110 PF13657 HipA N-terminal domain PACID_17190 PF13977 BetI-type transcriptional repressor, C-terminal PACID_17190 PF00440 Bacterial regulatory proteins, tetR family PACID_17230 PF01565 FAD binding domain PACID_17230 PF08031 Berberine and berberine like PACID_17250 PF00202 Aminotransferase class-III PACID_17290 PF00392 Bacterial regulatory proteins, gntR family PACID_17290 PF00155 Aminotransferase class I and II PACID_17310 PF00149 Calcineurin-like phosphoesterase PACID_17380 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_17380 PF11867 Domain of unknown function (DUF3387) PACID_17380 PF18766 SWI2/SNF2 ATPase PACID_17400 PF00872 Transposase, Mutator family PACID_17420 PF02384 N-6 DNA Methylase PACID_17420 PF12161 HsdM N-terminal domain PACID_17440 PF00293 NUDIX domain PACID_17450 PF02566 OsmC-like protein PACID_17470 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PACID_17470 PF01926 50S ribosome-binding GTPase PACID_17480 PF02224 Cytidylate kinase PACID_17500 PF00227 Proteasome subunit PACID_17510 PF00227 Proteasome subunit PACID_17530 PF08704 tRNA methyltransferase complex GCD14 subunit PACID_17540 PF02607 B12 binding domain PACID_17540 PF02965 Vitamin B12 dependent methionine synthase, activation domain PACID_17540 PF00809 Pterin binding enzyme PACID_17540 PF02574 Homocysteine S-methyltransferase PACID_17540 PF02310 B12 binding domain PACID_17560 PF00834 Ribulose-phosphate 3 epimerase family PACID_17570 PF01029 NusB family PACID_17570 PF01189 16S rRNA methyltransferase RsmB/F PACID_17580 PF00551 Formyl transferase PACID_17580 PF02911 Formyl transferase, C-terminal domain PACID_17590 PF17764 3′ DNA-binding domain (3′BD) PACID_17640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_17640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PACID_17650 PF00270 DEAD/DEAH box helicase PACID_17650 PF08494 DEAD/H associated PACID_17650 PF00271 Helicase conserved C-terminal domain PACID_17660 PF00438 S-adenosylmethionine synthetase, N-terminal domain PACID_17660 PF02773 S-adenosylmethionine synthetase, C-terminal domain PACID_17660 PF02772 S-adenosylmethionine synthetase, central domain PACID_17670 PF02441 Flavoprotein PACID_17670 PF04127 DNA / pantothenate metabolism flavoprotein PACID_17680 PF01192 RNA polymerase Rpb6 PACID_17690 PF00625 Guanylate kinase PACID_17710 PF01029 NusB family PACID_17720 PF09285 Elongation factor P, C-terminal PACID_17720 PF01132 Elongation factor P (EF-P) OB domain PACID_17720 PF08207 Elongation factor P (EF-P) KOW-like domain PACID_17740 PF01761 3-dehydroquinate synthase PACID_17750 PF01202 Shikimate kinase PACID_17760 PF01264 Chorismate synthase PACID_17770 PF08501 Shikimate dehydrogenase substrate binding domain PACID_17770 PF01488 Shikimate / quinate 5-dehydrogenase PACID_17770 PF18317 Shikimate 5'-dehydrogenase C-terminal domain PACID_17780 PF02618 YceG-like family PACID_17790 PF03652 Holliday junction resolvase PACID_17800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PACID_17800 PF01411 tRNA synthetases class II (A) PACID_17800 PF02272 DHHA1 domain PACID_17840 PF12002 MgsA AAA+ ATPase C terminal PACID_17840 PF00004 ATPase family associated with various cellular activities (AAA) PACID_17840 PF16193 AAA C-terminal domain PACID_17870 PF00152 tRNA synthetases class II (D, K and N) PACID_17870 PF02938 GAD domain PACID_17870 PF01336 OB-fold nucleic acid binding domain PACID_17900 PF00440 Bacterial regulatory proteins, tetR family PACID_17900 PF09209 Tetracyclin repressor-like, C-terminal domain PACID_17910 PF01869 BadF/BadG/BcrA/BcrD ATPase family PACID_17920 PF13393 Histidyl-tRNA synthetase PACID_17920 PF03129 Anticodon binding domain PACID_17930 PF00753 Metallo-beta-lactamase superfamily PACID_17940 PF03993 Domain of Unknown Function (DUF349) PACID_17950 PF14821 Threonine synthase N terminus PACID_17950 PF00291 Pyridoxal-phosphate dependent enzyme PACID_17960 PF02824 TGS domain PACID_17960 PF04607 Region found in RelA / SpoT proteins PACID_17960 PF13291 ACT domain PACID_17980 PF00156 Phosphoribosyl transferase domain PACID_17990 PF07549 SecD/SecF GG Motif PACID_17990 PF02355 Protein export membrane protein PACID_18000 PF07549 SecD/SecF GG Motif PACID_18000 PF02355 Protein export membrane protein PACID_18020 PF05496 Holliday junction DNA helicase RuvB P-loop domain PACID_18020 PF05491 RuvB C-terminal winged helix domain PACID_18020 PF17864 RuvB AAA lid domain PACID_18030 PF01330 RuvA N terminal domain PACID_18030 PF07499 RuvA, C-terminal domain PACID_18040 PF02075 Crossover junction endodeoxyribonuclease RuvC PACID_18050 PF01709 Transcriptional regulator PACID_18060 PF00977 Histidine biosynthesis protein PACID_18070 PF00117 Glutamine amidotransferase class-I PACID_18080 PF00475 Imidazoleglycerol-phosphate dehydratase PACID_18090 PF00155 Aminotransferase class I and II PACID_18100 PF00815 Histidinol dehydrogenase PACID_18120 PF02811 PHP domain PACID_18120 PF14579 Helix-hairpin-helix motif PACID_18120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PACID_18120 PF07733 Bacterial DNA polymerase III alpha NTPase domain PACID_18160 PF00528 Binding-protein-dependent transport system inner membrane component PACID_18170 PF00528 Binding-protein-dependent transport system inner membrane component PACID_18180 PF00232 Glycosyl hydrolase family 1 PACID_18190 PF00356 Bacterial regulatory proteins, lacI family PACID_18200 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_18200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PACID_18210 PF01493 GXGXG motif PACID_18210 PF00310 Glutamine amidotransferases class-II PACID_18210 PF04898 Glutamate synthase central domain PACID_18210 PF01645 Conserved region in glutamate synthase PACID_18220 PF01790 Prolipoprotein diacylglyceryl transferase PACID_18230 PF00290 Tryptophan synthase alpha chain PACID_18240 PF00291 Pyridoxal-phosphate dependent enzyme PACID_18250 PF00218 Indole-3-glycerol phosphate synthase PACID_18280 PF00425 chorismate binding enzyme PACID_18280 PF04715 Anthranilate synthase component I, N terminal region PACID_18290 PF01502 Phosphoribosyl-AMP cyclohydrolase PACID_18320 PF01475 Ferric uptake regulator family PACID_18340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_18340 PF03129 Anticodon binding domain PACID_18350 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PACID_18350 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PACID_18360 PF02910 Fumarate reductase flavoprotein C-term PACID_18360 PF00890 FAD binding domain PACID_18370 PF02445 Quinolinate synthetase A protein PACID_18390 PF00282 Pyridoxal-dependent decarboxylase conserved domain PACID_18410 PF00890 FAD binding domain PACID_18410 PF02910 Fumarate reductase flavoprotein C-term PACID_18470 PF01207 Dihydrouridine synthase (Dus) PACID_18500 PF01966 HD domain PACID_18500 PF13286 Phosphohydrolase-associated domain PACID_18510 PF08275 DNA primase catalytic core, N-terminal domain PACID_18510 PF13662 Toprim domain PACID_18510 PF08278 DNA primase DnaG DnaB-binding PACID_18510 PF10410 DnaB-helicase binding domain of primase PACID_18510 PF01807 CHC2 zinc finger PACID_18520 PF04542 Sigma-70 region 2 PACID_18520 PF04545 Sigma-70, region 4 PACID_18520 PF04539 Sigma-70 region 3 PACID_18560 PF00982 Glycosyltransferase family 20 PACID_18580 PF00291 Pyridoxal-phosphate dependent enzyme PACID_18600 PF00392 Bacterial regulatory proteins, gntR family PACID_18610 PF01680 SOR/SNZ family PACID_18620 PF01174 SNO glutamine amidotransferase family PACID_18630 PF01810 LysE type translocator PACID_18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_18640 PF03466 LysR substrate binding domain PACID_18660 PF00069 Protein kinase domain PACID_18670 PF00440 Bacterial regulatory proteins, tetR family PACID_18670 PF17754 MftR C-terminal domain PACID_18680 PF07690 Major Facilitator Superfamily PACID_18710 PF02899 Phage integrase, N-terminal SAM-like domain PACID_18710 PF00589 Phage integrase family PACID_18740 PF13614 AAA domain PACID_18830 PF00899 ThiF family PACID_18830 PF14461 Prokaryotic E2 family B PACID_18850 PF00239 Resolvase, N terminal domain PACID_18850 PF02796 Helix-turn-helix domain of resolvase PACID_18870 PF01022 Bacterial regulatory protein, arsR family PACID_18880 PF00239 Resolvase, N terminal domain PACID_18880 PF02796 Helix-turn-helix domain of resolvase PACID_18890 PF09299 Mu transposase, C-terminal PACID_18890 PF00665 Integrase core domain PACID_18900 PF13401 AAA domain PACID_18980 PF02637 GatB domain PACID_18980 PF02934 GatB/GatE catalytic domain PACID_18990 PF01425 Amidase PACID_19000 PF02686 Glu-tRNAGln amidotransferase C subunit PACID_19030 PF09084 NMT1/THI5 like PACID_19050 PF00005 ABC transporter PACID_19090 PF00266 Aminotransferase class-V PACID_19100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_19100 PF00128 Alpha amylase, catalytic domain PACID_19130 PF00343 Carbohydrate phosphorylase PACID_19130 PF11897 Protein of unknown function (DUF3417) PACID_19140 PF11896 Domain of unknown function (DUF3416) PACID_19150 PF18085 Maltokinase N-terminal cap domain PACID_19160 PF00128 Alpha amylase, catalytic domain PACID_19160 PF02806 Alpha amylase, C-terminal all-beta domain PACID_19160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_19180 PF02378 Phosphotransferase system, EIIC PACID_19180 PF00367 phosphotransferase system, EIIB PACID_19180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PACID_19190 PF03636 Glycosyl hydrolase family 65, N-terminal domain PACID_19190 PF03632 Glycosyl hydrolase family 65 central catalytic domain PACID_19190 PF03633 Glycosyl hydrolase family 65, C-terminal domain PACID_19200 PF13419 Haloacid dehalogenase-like hydrolase PACID_19210 PF00085 Thioredoxin PACID_19220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_19220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_19220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_19220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_19280 PF01939 Endonuclease NucS PACID_19300 PF00561 alpha/beta hydrolase fold PACID_19310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PACID_19320 PF01923 Cobalamin adenosyltransferase PACID_19340 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PACID_19350 PF02874 ATP synthase alpha/beta family, beta-barrel domain PACID_19350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_19360 PF00231 ATP synthase PACID_19370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_19370 PF00306 ATP synthase alpha/beta chain, C terminal domain PACID_19370 PF02874 ATP synthase alpha/beta family, beta-barrel domain PACID_19380 PF00213 ATP synthase delta (OSCP) subunit PACID_19390 PF00430 ATP synthase B/B' CF(0) PACID_19400 PF00137 ATP synthase subunit C PACID_19410 PF00119 ATP synthase A chain PACID_19440 PF06426 Serine acetyltransferase, N-terminal PACID_19440 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_19460 PF13537 Glutamine amidotransferase domain PACID_19460 PF00733 Asparagine synthase PACID_19470 PF02540 NAD synthase PACID_19490 PF13193 AMP-binding enzyme C-terminal domain PACID_19490 PF00501 AMP-binding enzyme PACID_19520 PF00733 Asparagine synthase PACID_19520 PF13537 Glutamine amidotransferase domain PACID_19630 PF00953 Glycosyl transferase family 4 PACID_19640 PF01300 Telomere recombination PACID_19650 PF17827 PrmC N-terminal domain PACID_19650 PF13649 Methyltransferase domain PACID_19660 PF00472 RF-1 domain PACID_19660 PF03462 PCRF domain PACID_19670 PF01197 Ribosomal protein L31 PACID_19680 PF07497 Rho termination factor, RNA-binding domain PACID_19680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_19680 PF07498 Rho termination factor, N-terminal domain PACID_19690 PF00288 GHMP kinases N terminal domain PACID_19690 PF08544 GHMP kinases C terminal PACID_19700 PF00742 Homoserine dehydrogenase PACID_19700 PF01842 ACT domain PACID_19700 PF03447 Homoserine dehydrogenase, NAD binding domain PACID_19720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PACID_19720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PACID_19740 PF03641 Possible lysine decarboxylase PACID_19760 PF02779 Transketolase, pyrimidine binding domain PACID_19760 PF16870 2-oxoglutarate dehydrogenase C-terminal PACID_19760 PF00676 Dehydrogenase E1 component PACID_19760 PF16078 2-oxoglutarate dehydrogenase N-terminus PACID_19760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_19790 PF02467 Transcription factor WhiB PACID_19800 PF07568 Histidine kinase PACID_19800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_19800 PF12282 Signal transduction histidine kinase PACID_19830 PF04542 Sigma-70 region 2 PACID_19830 PF08281 Sigma-70, region 4 PACID_19850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PACID_19860 PF03193 RsgA GTPase PACID_19880 PF00459 Inositol monophosphatase family PACID_19890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_19890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_19920 PF00528 Binding-protein-dependent transport system inner membrane component PACID_19930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_19980 PF03699 Uncharacterised protein family (UPF0182) PACID_20000 PF05362 Lon protease (S16) C-terminal proteolytic domain PACID_20000 PF13180 PDZ domain PACID_20040 PF00580 UvrD/REP helicase N-terminal domain PACID_20040 PF13361 UvrD-like helicase C-terminal domain PACID_20040 PF00570 HRDC domain PACID_20050 PF17946 RecC C-terminal domain PACID_20060 PF12705 PD-(D/E)XK nuclease superfamily PACID_20060 PF00580 UvrD/REP helicase N-terminal domain PACID_20060 PF13361 UvrD-like helicase C-terminal domain PACID_20070 PF13538 UvrD-like helicase C-terminal domain PACID_20080 PF13361 UvrD-like helicase C-terminal domain PACID_20080 PF00580 UvrD/REP helicase N-terminal domain PACID_20090 PF00580 UvrD/REP helicase N-terminal domain PACID_20090 PF13361 UvrD-like helicase C-terminal domain PACID_20100 PF00313 'Cold-shock' DNA-binding domain PACID_20140 PF00270 DEAD/DEAH box helicase PACID_20140 PF00271 Helicase conserved C-terminal domain PACID_20150 PF00579 tRNA synthetases class I (W and Y) PACID_20170 PF02811 PHP domain PACID_20210 PF07517 SecA DEAD-like domain PACID_20210 PF01043 SecA preprotein cross-linking domain PACID_20210 PF07516 SecA Wing and Scaffold domain PACID_20230 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus PACID_20230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PACID_20260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_20260 PF00512 His Kinase A (phospho-acceptor) domain PACID_20260 PF00672 HAMP domain PACID_20270 PF00486 Transcriptional regulatory protein, C terminal PACID_20270 PF00072 Response regulator receiver domain PACID_20280 PF02622 Uncharacterized ACR, COG1678 PACID_20300 PF00206 Lyase PACID_20300 PF14698 Argininosuccinate lyase C-terminal PACID_20310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PACID_20310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PACID_20320 PF00202 Aminotransferase class-III PACID_20330 PF00696 Amino acid kinase family PACID_20340 PF01960 ArgJ family PACID_20350 PF01118 Semialdehyde dehydrogenase, NAD binding domain PACID_20350 PF02774 Semialdehyde dehydrogenase, dimerisation domain PACID_20360 PF01668 SmpB protein PACID_20370 PF02687 FtsX-like permease family PACID_20370 PF18075 FtsX extracellular domain PACID_20380 PF00005 ABC transporter PACID_20390 PF00472 RF-1 domain PACID_20390 PF03462 PCRF domain PACID_20420 PF05656 Protein of unknown function (DUF805) PACID_20440 PF09397 Ftsk gamma domain PACID_20440 PF17854 FtsK alpha domain PACID_20440 PF01580 FtsK/SpoIIIE family PACID_20450 PF02769 AIR synthase related protein, C-terminal domain PACID_20450 PF00586 AIR synthase related protein, N-terminal domain PACID_20480 PF01820 D-ala D-ala ligase N-terminus PACID_20480 PF07478 D-ala D-ala ligase C-terminus PACID_20500 PF00694 Aconitase C-terminal domain PACID_20510 PF00330 Aconitase family (aconitate hydratase) PACID_20520 PF09339 IclR helix-turn-helix domain PACID_20520 PF01614 Bacterial transcriptional regulator PACID_20560 PF01557 Fumarylacetoacetate (FAA) hydrolase family PACID_20570 PF00591 Glycosyl transferase family, a/b domain PACID_20570 PF02885 Glycosyl transferase family, helical bundle domain PACID_20570 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PACID_20580 PF00682 HMGL-like PACID_20580 PF08502 LeuA allosteric (dimerisation) domain PACID_20590 PF01063 Amino-transferase class IV PACID_20600 PF00180 Isocitrate/isopropylmalate dehydrogenase PACID_20640 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain PACID_20640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PACID_20650 PF10369 Small subunit of acetolactate synthase PACID_20670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_20670 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_20670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_20680 PF01230 HIT domain PACID_20690 PF00977 Histidine biosynthesis protein PACID_20700 PF00270 DEAD/DEAH box helicase PACID_20700 PF00271 Helicase conserved C-terminal domain PACID_20700 PF08148 DSHCT (NUC185) domain PACID_20710 PF00781 Diacylglycerol kinase catalytic domain PACID_20720 PF00902 Sec-independent protein translocase protein (TatC) PACID_20730 PF02416 mttA/Hcf106 family PACID_20750 PF13280 WYL domain PACID_20760 PF13280 WYL domain PACID_20770 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_20790 PF01479 S4 domain PACID_20790 PF00849 RNA pseudouridylate synthase PACID_20810 PF13614 AAA domain PACID_20820 PF00589 Phage integrase family PACID_20820 PF02899 Phage integrase, N-terminal SAM-like domain PACID_20840 PF06418 CTP synthase N-terminus PACID_20840 PF00117 Glutamine amidotransferase class-I PACID_20850 PF02463 RecF/RecN/SMC N terminal domain PACID_20860 PF01513 ATP-NAD kinase PACID_20870 PF01728 FtsJ-like methyltransferase PACID_20870 PF01479 S4 domain PACID_20880 PF02361 Cobalt transport protein PACID_20890 PF00005 ABC transporter PACID_20900 PF02632 BioY family PACID_20910 PF18407 GCN5-related N-acetyltransferase like domain PACID_20910 PF13344 Haloacid dehalogenase-like hydrolase PACID_20980 PF08029 HisG, C-terminal domain PACID_20980 PF01634 ATP phosphoribosyltransferase PACID_20990 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PACID_21000 PF04973 Nicotinamide mononucleotide transporter PACID_21020 PF00248 Aldo/keto reductase family PACID_21030 PF00285 Citrate synthase, C-terminal domain PACID_21040 PF07687 Peptidase dimerisation domain PACID_21040 PF01546 Peptidase family M20/M25/M40 PACID_21090 PF00356 Bacterial regulatory proteins, lacI family PACID_21100 PF02610 L-arabinose isomerase PACID_21100 PF11762 L-arabinose isomerase C-terminal domain PACID_21110 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_21130 PF00083 Sugar (and other) transporter PACID_21140 PF00356 Bacterial regulatory proteins, lacI family PACID_21150 PF13416 Bacterial extracellular solute-binding protein PACID_21180 PF00356 Bacterial regulatory proteins, lacI family PACID_21190 PF00528 Binding-protein-dependent transport system inner membrane component PACID_21200 PF00528 Binding-protein-dependent transport system inner membrane component PACID_21220 PF06964 Alpha-L-arabinofuranosidase C-terminal domain PACID_21240 PF17782 DprA winged helix domain PACID_21240 PF02481 DNA recombination-mediator protein A PACID_21250 PF01078 Magnesium chelatase, subunit ChlI PACID_21250 PF13335 Magnesium chelatase, subunit ChlI C-terminal PACID_21260 PF02021 Uncharacterised protein family UPF0102 PACID_21270 PF10611 Protein of unknown function (DUF2469) PACID_21280 PF01351 Ribonuclease HII PACID_21290 PF10502 Signal peptidase, peptidase S26 PACID_21300 PF01245 Ribosomal protein L19 PACID_21310 PF13183 4Fe-4S dicluster domain PACID_21310 PF13085 2Fe-2S iron-sulfur cluster binding domain PACID_21320 PF00890 FAD binding domain PACID_21320 PF02910 Fumarate reductase flavoprotein C-term PACID_21340 PF01746 tRNA (Guanine-1)-methyltransferase PACID_21350 PF01782 RimM N-terminal domain PACID_21350 PF05239 PRC-barrel domain PACID_21370 PF00886 Ribosomal protein S16 PACID_21380 PF01979 Amidohydrolase family PACID_21390 PF02881 SRP54-type protein, helical bundle domain PACID_21390 PF02978 Signal peptide binding domain PACID_21390 PF00448 SRP54-type protein, GTPase domain PACID_21450 PF02881 SRP54-type protein, helical bundle domain PACID_21450 PF00448 SRP54-type protein, GTPase domain PACID_21520 PF00248 Aldo/keto reductase family PACID_21530 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_21530 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PACID_21530 PF06827 Zinc finger found in FPG and IleRS PACID_21540 PF00035 Double-stranded RNA binding motif PACID_21540 PF14622 Ribonuclease-III-like PACID_21550 PF01783 Ribosomal L32p protein family PACID_21560 PF02620 Large ribosomal RNA subunit accumulation protein YceD PACID_21570 PF01467 Cytidylyltransferase-like PACID_21590 PF12900 Pyridoxamine 5'-phosphate oxidase PACID_21610 PF17191 RecG wedge domain PACID_21610 PF00271 Helicase conserved C-terminal domain PACID_21610 PF00270 DEAD/DEAH box helicase PACID_21620 PF00830 Ribosomal L28 family PACID_21630 PF17770 Ribonuclease J C-terminal domain PACID_21630 PF12706 Beta-lactamase superfamily domain PACID_21630 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain PACID_21650 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_21650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_21650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_21670 PF01113 Dihydrodipicolinate reductase, N-terminus PACID_21670 PF05173 Dihydrodipicolinate reductase, C-terminus PACID_21680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PACID_21680 PF00575 S1 RNA binding domain PACID_21680 PF00013 KH domain PACID_21680 PF01138 3' exoribonuclease family, domain 1 PACID_21690 PF00312 Ribosomal protein S15 PACID_21700 PF01687 Riboflavin kinase PACID_21700 PF06574 FAD synthetase PACID_21730 PF01509 TruB family pseudouridylate synthase (N terminal domain) PACID_21730 PF16198 tRNA pseudouridylate synthase B C-terminal domain PACID_21730 PF09142 tRNA Pseudouridine synthase II, C terminal PACID_21760 PF03608 PTS system enzyme II sorbitol-specific factor PACID_21770 PF07663 Sorbitol phosphotransferase enzyme II C-terminus PACID_21770 PF03612 Sorbitol phosphotransferase enzyme II N-terminus PACID_21780 PF03829 PTS system glucitol/sorbitol-specific IIA component PACID_21800 PF13685 Iron-containing alcohol dehydrogenase PACID_21810 PF02033 Ribosome-binding factor A PACID_21820 PF03109 ABC1 family PACID_21830 PF00009 Elongation factor Tu GTP binding domain PACID_21830 PF04760 Translation initiation factor IF-2, N-terminal region PACID_21830 PF11987 Translation-initiation factor 2 PACID_21850 PF13184 NusA-like KH domain PACID_21850 PF08529 NusA N-terminal domain PACID_21860 PF02576 RimP N-terminal domain PACID_21860 PF17384 RimP C-terminal SH3 domain PACID_21880 PF01925 Sulfite exporter TauE/SafE PACID_21900 PF03129 Anticodon binding domain PACID_21900 PF04073 Aminoacyl-tRNA editing domain PACID_21900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_21920 PF01841 Transglutaminase-like superfamily PACID_21920 PF08379 Bacterial transglutaminase-like N-terminal region PACID_21930 PF14403 Circularly permuted ATP-grasp type 2 PACID_21930 PF04168 A predicted alpha-helical domain with a conserved ER motif. PACID_21940 PF04174 A circularly permuted ATPgrasp PACID_21950 PF07732 Multicopper oxidase PACID_21950 PF07731 Multicopper oxidase PACID_21980 PF04551 GcpE protein PACID_21990 PF17820 PDZ domain PACID_21990 PF02163 Peptidase family M50 PACID_22010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PACID_22010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PACID_22020 PF04055 Radical SAM superfamily PACID_22040 PF01765 Ribosome recycling factor PACID_22050 PF00696 Amino acid kinase family PACID_22060 PF00889 Elongation factor TS PACID_22070 PF00318 Ribosomal protein S2 PACID_22100 PF07728 AAA domain (dynein-related subfamily) PACID_22120 PF05762 VWA domain containing CoxE-like protein PACID_22140 PF01551 Peptidase family M23 PACID_22150 PF02899 Phage integrase, N-terminal SAM-like domain PACID_22150 PF00589 Phage integrase family PACID_22170 PF01327 Polypeptide deformylase PACID_22210 PF00588 SpoU rRNA Methylase family PACID_22220 PF13593 SBF-like CPA transporter family (DUF4137) PACID_22230 PF01145 SPFH domain / Band 7 family PACID_22250 PF00005 ABC transporter PACID_22270 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PACID_22270 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain PACID_22270 PF13288 DXP reductoisomerase C-terminal domain PACID_22280 PF10415 Fumarase C C-terminus PACID_22280 PF00206 Lyase PACID_22370 PF00005 ABC transporter PACID_22370 PF12848 ABC transporter PACID_22410 PF04228 Putative neutral zinc metallopeptidase PACID_22450 PF01883 Iron-sulfur cluster assembly protein PACID_22460 PF01592 NifU-like N terminal domain PACID_22470 PF00266 Aminotransferase class-V PACID_22480 PF00005 ABC transporter PACID_22490 PF00355 Rieske [2Fe-2S] domain PACID_22500 PF01458 Uncharacterized protein family (UPF0051) PACID_22510 PF01458 Uncharacterized protein family (UPF0051) PACID_22560 PF00528 Binding-protein-dependent transport system inner membrane component PACID_22560 PF14785 Maltose transport system permease protein MalF P2 domain PACID_22570 PF00528 Binding-protein-dependent transport system inner membrane component PACID_22580 PF00356 Bacterial regulatory proteins, lacI family PACID_22590 PF00872 Transposase, Mutator family PACID_22600 PF00356 Bacterial regulatory proteins, lacI family PACID_22620 PF03030 Inorganic H+ pyrophosphatase PACID_22630 PF00005 ABC transporter PACID_22650 PF02628 Cytochrome oxidase assembly protein PACID_22660 PF01040 UbiA prenyltransferase family PACID_22670 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PACID_22670 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PACID_22690 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PACID_22710 PF00133 tRNA synthetases class I (I, L, M and V) PACID_22710 PF08264 Anticodon-binding domain of tRNA PACID_22740 PF14684 Tricorn protease C1 domain PACID_22740 PF07676 WD40-like Beta Propeller Repeat PACID_22740 PF14685 Tricorn protease PDZ domain PACID_22740 PF03572 Peptidase family S41 PACID_22760 PF06689 ClpX C4-type zinc finger PACID_22760 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_22760 PF07724 AAA domain (Cdc48 subfamily) PACID_22770 PF00574 Clp protease PACID_22780 PF00574 Clp protease PACID_22790 PF01594 AI-2E family transporter PACID_22800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PACID_22800 PF05698 Bacterial trigger factor protein (TF) C-terminus PACID_22800 PF05697 Bacterial trigger factor protein (TF) PACID_22940 PF00872 Transposase, Mutator family PACID_22990 PF06616 BsuBI/PstI restriction endonuclease domain PACID_22990 PF17728 BsuBI/PstI restriction endonuclease HTH domain PACID_23000 PF07669 Eco57I restriction-modification methylase PACID_23030 PF01336 OB-fold nucleic acid binding domain PACID_23030 PF16995 Transmembrane region of lysyl-tRNA synthetase PACID_23030 PF09924 Uncharacterised conserved protein (DUF2156) PACID_23030 PF00152 tRNA synthetases class II (D, K and N) PACID_23050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_23050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PACID_23050 PF06827 Zinc finger found in FPG and IleRS PACID_23070 PF02502 Ribose/Galactose Isomerase PACID_23080 PF17668 Acetyltransferase (GNAT) domain PACID_23080 PF13530 Sterol carrier protein domain PACID_23100 PF12826 Helix-hairpin-helix motif PACID_23100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PACID_23100 PF03120 NAD-dependent DNA ligase OB-fold domain PACID_23100 PF01653 NAD-dependent DNA ligase adenylation domain PACID_23100 PF00533 BRCA1 C Terminus (BRCT) domain PACID_23110 PF01323 DSBA-like thioredoxin domain PACID_23120 PF01433 Peptidase family M1 domain PACID_23120 PF11838 ERAP1-like C-terminal domain PACID_23140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PACID_23140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PACID_23160 PF07690 Major Facilitator Superfamily PACID_23190 PF00501 AMP-binding enzyme PACID_23200 PF00501 AMP-binding enzyme PACID_23220 PF01565 FAD binding domain PACID_23220 PF02913 FAD linked oxidases, C-terminal domain PACID_23220 PF13183 4Fe-4S dicluster domain PACID_23230 PF00005 ABC transporter PACID_23230 PF12848 ABC transporter PACID_23240 PF00436 Single-strand binding protein family PACID_23270 PF00929 Exonuclease PACID_23290 PF08241 Methyltransferase domain PACID_23310 PF00117 Glutamine amidotransferase class-I PACID_23310 PF00958 GMP synthase C terminal domain PACID_23310 PF03352 Methyladenine glycosylase PACID_23310 PF13302 Acetyltransferase (GNAT) domain PACID_23310 PF13673 Acetyltransferase (GNAT) domain PACID_23320 PF01177 Asp/Glu/Hydantoin racemase PACID_23370 PF00271 Helicase conserved C-terminal domain PACID_23370 PF00176 SNF2 family N-terminal domain PACID_23410 PF00440 Bacterial regulatory proteins, tetR family PACID_23450 PF01177 Asp/Glu/Hydantoin racemase PACID_23460 PF04073 Aminoacyl-tRNA editing domain PACID_23470 PF02567 Phenazine biosynthesis-like protein PACID_23480 PF13847 Methyltransferase domain PACID_23490 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_23520 PF00072 Response regulator receiver domain PACID_23520 PF00196 Bacterial regulatory proteins, luxR family PACID_23530 PF13492 GAF domain PACID_23530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_23530 PF07730 Histidine kinase PACID_23550 PF09383 NIL domain PACID_23550 PF00005 ABC transporter PACID_23570 PF00324 Amino acid permease PACID_23600 PF00005 ABC transporter PACID_23640 PF03601 Conserved hypothetical protein 698 PACID_23650 PF00005 ABC transporter PACID_23650 PF17755 UvrA DNA-binding domain PACID_23650 PF17760 UvrA interaction domain PACID_23660 PF13520 Amino acid permease PACID_23680 PF02811 PHP domain PACID_23680 PF17657 Bacterial DNA polymerase III alpha subunit finger domain PACID_23680 PF07733 Bacterial DNA polymerase III alpha NTPase domain PACID_23680 PF14579 Helix-hairpin-helix motif PACID_23720 PF01225 Mur ligase family, catalytic domain PACID_23720 PF02875 Mur ligase family, glutamate ligase domain PACID_23720 PF08245 Mur ligase middle domain PACID_23730 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_23750 PF00117 Glutamine amidotransferase class-I PACID_23760 PF00166 Chaperonin 10 Kd subunit PACID_23780 PF00578 AhpC/TSA family PACID_23810 PF11799 impB/mucB/samB family C-terminal domain PACID_23810 PF00817 impB/mucB/samB family PACID_23820 PF00186 Dihydrofolate reductase PACID_23830 PF00303 Thymidylate synthase PACID_23840 PF01725 Ham1 family PACID_23850 PF03725 3' exoribonuclease family, domain 2 PACID_23850 PF01138 3' exoribonuclease family, domain 1 PACID_23860 PF01177 Asp/Glu/Hydantoin racemase PACID_23880 PF07670 Nucleoside recognition PACID_23880 PF17910 FeoB cytosolic helical domain PACID_23880 PF07664 Ferrous iron transport protein B C terminus PACID_23880 PF02421 Ferrous iron transport protein B PACID_23880 PF04023 FeoA domain PACID_23910 PF02617 ATP-dependent Clp protease adaptor protein ClpS PACID_23920 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain PACID_23920 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PACID_23930 PF00216 Bacterial DNA-binding protein PACID_23940 PF02446 4-alpha-glucanotransferase PACID_23980 PF01220 Dehydroquinase class II PACID_24060 PF02467 Transcription factor WhiB PACID_24090 PF01050 Mannose-6-phosphate isomerase PACID_24090 PF00483 Nucleotidyl transferase PACID_24120 PF03816 Cell envelope-related transcriptional attenuator domain PACID_24130 PF00731 AIR carboxylase PACID_24140 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain PACID_24140 PF02222 ATP-grasp domain PACID_24160 PF03575 Peptidase family S51 PACID_24180 PF01039 Carboxyl transferase domain PACID_24200 PF02545 Maf-like protein PACID_24230 PF00106 short chain dehydrogenase PACID_24250 PF08543 Phosphomethylpyrimidine kinase PACID_24270 PF02785 Biotin carboxylase C-terminal domain PACID_24270 PF00364 Biotin-requiring enzyme PACID_24270 PF00289 Biotin carboxylase, N-terminal domain PACID_24270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_24290 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_24290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_24300 PF01048 Phosphorylase superfamily PACID_24310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_24310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_24310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_24310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_24320 PF13193 AMP-binding enzyme C-terminal domain PACID_24320 PF00501 AMP-binding enzyme PACID_24360 PF00202 Aminotransferase class-III PACID_24370 PF10531 SLBB domain PACID_24370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PACID_24370 PF13375 RnfC Barrel sandwich hybrid domain PACID_24370 PF13237 4Fe-4S dicluster domain PACID_24380 PF09338 Glycine/sarcosine/betaine reductase component B subunits PACID_24400 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) PACID_24420 PF05544 Proline racemase PACID_24440 PF08264 Anticodon-binding domain of tRNA PACID_24440 PF09334 tRNA synthetases class I (M) PACID_24450 PF00075 RNase H PACID_24460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_24500 PF02608 ABC transporter substrate-binding protein PnrA-like PACID_24520 PF01595 Cyclin M transmembrane N-terminal domain PACID_24520 PF00571 CBS domain PACID_24520 PF03471 Transporter associated domain PACID_24540 PF03971 Monomeric isocitrate dehydrogenase PACID_24550 PF00551 Formyl transferase PACID_24560 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_24560 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_24580 PF00171 Aldehyde dehydrogenase family PACID_24600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PACID_24600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PACID_24620 PF01808 AICARFT/IMPCHase bienzyme PACID_24620 PF02142 MGS-like domain PACID_24630 PF00551 Formyl transferase PACID_24640 PF00885 6,7-dimethyl-8-ribityllumazine synthase PACID_24650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PACID_24650 PF00925 GTP cyclohydrolase II PACID_24660 PF00677 Lumazine binding domain PACID_24670 PF01872 RibD C-terminal domain PACID_24670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_24700 PF00549 CoA-ligase PACID_24700 PF02629 CoA binding domain PACID_24710 PF00549 CoA-ligase PACID_24710 PF08442 ATP-grasp domain PACID_24720 PF01551 Peptidase family M23 PACID_24720 PF08460 Bacterial SH3 domain PACID_24730 PF13361 UvrD-like helicase C-terminal domain PACID_24730 PF00580 UvrD/REP helicase N-terminal domain PACID_24760 PF03180 NLPA lipoprotein PACID_24770 PF00005 ABC transporter PACID_24770 PF09383 NIL domain PACID_24780 PF00528 Binding-protein-dependent transport system inner membrane component PACID_24790 PF13091 PLD-like domain PACID_24800 PF04226 Transglycosylase associated protein PACID_24810 PF00196 Bacterial regulatory proteins, luxR family PACID_24810 PF00072 Response regulator receiver domain PACID_24860 PF00958 GMP synthase C terminal domain PACID_24860 PF02540 NAD synthase PACID_24860 PF00117 Glutamine amidotransferase class-I PACID_24870 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_24870 PF06426 Serine acetyltransferase, N-terminal PACID_24880 PF01817 Chorismate mutase type II PACID_24880 PF02153 Prephenate dehydrogenase PACID_24900 PF00478 IMP dehydrogenase / GMP reductase domain PACID_24910 PF00571 CBS domain PACID_24910 PF00478 IMP dehydrogenase / GMP reductase domain PACID_24930 PF00118 TCP-1/cpn60 chaperonin family PACID_24940 PF00166 Chaperonin 10 Kd subunit PACID_24960 PF18096 THUMP domain-like PACID_24980 PF01875 Memo-like protein PACID_25010 PF03051 Peptidase C1-like family PACID_25020 PF00814 Glycoprotease family PACID_25040 PF00583 Acetyltransferase (GNAT) family PACID_25040 PF00814 Glycoprotease family PACID_25050 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE PACID_25060 PF00271 Helicase conserved C-terminal domain PACID_25060 PF00270 DEAD/DEAH box helicase PACID_25070 PF13439 Glycosyltransferase Family 4 PACID_25070 PF00534 Glycosyl transferases group 1 PACID_25080 PF03853 YjeF-related protein N-terminus PACID_25080 PF01256 Carbohydrate kinase PACID_25090 PF01648 4'-phosphopantetheinyl transferase superfamily PACID_25100 PF01380 SIS domain PACID_25110 PF08241 Methyltransferase domain PACID_25120 PF00485 Phosphoribulokinase / Uridine kinase family PACID_25140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_25140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_25140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_25140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_25160 PF00380 Ribosomal protein S9/S16 PACID_25170 PF00572 Ribosomal protein L13 PACID_25210 PF02390 Putative methyltransferase PACID_25220 PF01416 tRNA pseudouridine synthase PACID_25230 PF08468 Methyltransferase small domain N-terminal PACID_25230 PF05175 Methyltransferase small domain PACID_25250 PF02361 Cobalt transport protein PACID_25260 PF00005 ABC transporter PACID_25280 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PACID_25280 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PACID_25290 PF00958 GMP synthase C terminal domain PACID_25290 PF02540 NAD synthase PACID_25290 PF00117 Glutamine amidotransferase class-I PACID_25310 PF00534 Glycosyl transferases group 1 PACID_25310 PF13579 Glycosyl transferase 4-like domain PACID_25320 PF01196 Ribosomal protein L17 PACID_25330 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PACID_25330 PF01000 RNA polymerase Rpb3/RpoA insert domain PACID_25330 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PACID_25350 PF01479 S4 domain PACID_25350 PF00163 Ribosomal protein S4/S9 N-terminal domain PACID_25360 PF00411 Ribosomal protein S11 PACID_25370 PF00416 Ribosomal protein S13/S18 PACID_25380 PF00444 Ribosomal protein L36 PACID_25390 PF01176 Translation initiation factor 1A / IF-1 PACID_25420 PF00557 Metallopeptidase family M24 PACID_25440 PF00344 SecY translocase PACID_25460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_25470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_25470 PF00005 ABC transporter PACID_25480 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_25480 PF00528 Binding-protein-dependent transport system inner membrane component PACID_25490 PF00528 Binding-protein-dependent transport system inner membrane component PACID_25500 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A PACID_25510 PF00327 Ribosomal protein L30p/L7e PACID_25520 PF00333 Ribosomal protein S5, N-terminal domain PACID_25520 PF03719 Ribosomal protein S5, C-terminal domain PACID_25530 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast PACID_25540 PF00347 Ribosomal protein L6 PACID_25550 PF00410 Ribosomal protein S8 PACID_25560 PF00253 Ribosomal protein S14p/S29e PACID_25570 PF00281 Ribosomal protein L5 PACID_25570 PF00673 ribosomal L5P family C-terminus PACID_25580 PF00467 KOW motif PACID_25580 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 PACID_25590 PF00238 Ribosomal protein L14p/L23e PACID_25600 PF17755 UvrA DNA-binding domain PACID_25600 PF17760 UvrA interaction domain PACID_25600 PF00005 ABC transporter PACID_25610 PF00528 Binding-protein-dependent transport system inner membrane component PACID_25620 PF00528 Binding-protein-dependent transport system inner membrane component PACID_25650 PF00356 Bacterial regulatory proteins, lacI family PACID_25670 PF00366 Ribosomal protein S17 PACID_25680 PF00831 Ribosomal L29 protein PACID_25690 PF00252 Ribosomal protein L16p/L10e PACID_25700 PF07650 KH domain PACID_25700 PF00189 Ribosomal protein S3, C-terminal domain PACID_25710 PF00237 Ribosomal protein L22p/L17e PACID_25720 PF00203 Ribosomal protein S19 PACID_25730 PF03947 Ribosomal Proteins L2, C-terminal domain PACID_25730 PF00181 Ribosomal Proteins L2, RNA binding domain PACID_25740 PF00276 Ribosomal protein L23 PACID_25750 PF00573 Ribosomal protein L4/L1 family PACID_25760 PF00297 Ribosomal protein L3 PACID_25770 PF00338 Ribosomal protein S10p/S20e PACID_25780 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_25800 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_25800 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PACID_25830 PF03143 Elongation factor Tu C-terminal domain PACID_25830 PF03144 Elongation factor Tu domain 2 PACID_25830 PF00009 Elongation factor Tu GTP binding domain PACID_25850 PF03144 Elongation factor Tu domain 2 PACID_25850 PF00679 Elongation factor G C-terminus PACID_25850 PF00009 Elongation factor Tu GTP binding domain PACID_25850 PF03764 Elongation factor G, domain IV PACID_25850 PF14492 Elongation Factor G, domain II PACID_25860 PF00177 Ribosomal protein S7p/S5e PACID_25870 PF00164 Ribosomal protein S12/S23 PACID_25880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_25910 PF05000 RNA polymerase Rpb1, domain 4 PACID_25910 PF04998 RNA polymerase Rpb1, domain 5 PACID_25910 PF00623 RNA polymerase Rpb1, domain 2 PACID_25910 PF04997 RNA polymerase Rpb1, domain 1 PACID_25910 PF04983 RNA polymerase Rpb1, domain 3 PACID_25920 PF00562 RNA polymerase Rpb2, domain 6 PACID_25920 PF10385 RNA polymerase beta subunit external 1 domain PACID_25920 PF04560 RNA polymerase Rpb2, domain 7 PACID_25920 PF04563 RNA polymerase beta subunit PACID_25920 PF04565 RNA polymerase Rpb2, domain 3 PACID_25920 PF04561 RNA polymerase Rpb2, domain 2 PACID_25930 PF16320 Ribosomal protein L7/L12 dimerisation domain PACID_25930 PF00542 Ribosomal protein L7/L12 C-terminal domain PACID_25940 PF00466 Ribosomal protein L10 PACID_25950 PF00687 Ribosomal protein L1p/L10e family PACID_25960 PF03946 Ribosomal protein L11, N-terminal domain PACID_25960 PF00298 Ribosomal protein L11, RNA binding domain PACID_25970 PF02357 Transcription termination factor nusG PACID_26000 PF12897 Alanine-glyoxylate amino-transferase PACID_26010 PF01565 FAD binding domain PACID_26010 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PACID_26030 PF13452 N-terminal half of MaoC dehydratase PACID_26040 PF00471 Ribosomal protein L33 PACID_26080 PF04461 Protein of unknown function (DUF520) PACID_26120 PF00037 4Fe-4S binding domain PACID_26130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PACID_26130 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PACID_26140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PACID_26150 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II PACID_26150 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PACID_26150 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PACID_26160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_26170 PF05649 Peptidase family M13 PACID_26170 PF01431 Peptidase family M13 PACID_26190 PF02653 Branched-chain amino acid transport system / permease component PACID_26200 PF02653 Branched-chain amino acid transport system / permease component PACID_26210 PF00005 ABC transporter PACID_26220 PF13407 Periplasmic binding protein domain PACID_26230 PF03328 HpcH/HpaI aldolase/citrate lyase family PACID_26240 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PACID_26250 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PACID_26270 PF00348 Polyprenyl synthetase PACID_26280 PF00361 Proton-conducting membrane transporter PACID_26290 PF00361 Proton-conducting membrane transporter PACID_26300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PACID_26300 PF00361 Proton-conducting membrane transporter PACID_26310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PACID_26320 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PACID_26330 PF12838 4Fe-4S dicluster domain PACID_26340 PF00146 NADH dehydrogenase PACID_26350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PACID_26350 PF04879 Molybdopterin oxidoreductase Fe4S4 domain PACID_26350 PF00384 Molybdopterin oxidoreductase PACID_26350 PF01568 Molydopterin dinucleotide binding domain PACID_26360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PACID_26360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PACID_26360 PF10531 SLBB domain PACID_26380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PACID_26390 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PACID_26400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PACID_26410 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PACID_26420 PF01494 FAD binding domain PACID_26430 PF00425 chorismate binding enzyme PACID_26480 PF00005 ABC transporter PACID_26490 PF01209 ubiE/COQ5 methyltransferase family PACID_26510 PF00664 ABC transporter transmembrane region PACID_26510 PF00005 ABC transporter PACID_26530 PF01040 UbiA prenyltransferase family PACID_26540 PF07690 Major Facilitator Superfamily PACID_26550 PF02733 Dak1 domain PACID_26560 PF02734 DAK2 domain PACID_26570 PF00391 PEP-utilising enzyme, mobile domain PACID_26570 PF05524 PEP-utilising enzyme, N-terminal PACID_26570 PF03610 PTS system fructose IIA component PACID_26570 PF00381 PTS HPr component phosphorylation site PACID_26600 PF00288 GHMP kinases N terminal domain PACID_26600 PF08544 GHMP kinases C terminal PACID_26600 PF10509 Galactokinase galactose-binding signature PACID_26610 PF16916 Dimerisation domain of Zinc Transporter PACID_26610 PF01545 Cation efflux family PACID_26640 PF13344 Haloacid dehalogenase-like hydrolase PACID_26650 PF00296 Luciferase-like monooxygenase PACID_26690 PF10509 Galactokinase galactose-binding signature PACID_26690 PF08544 GHMP kinases C terminal PACID_26690 PF00288 GHMP kinases N terminal domain PACID_26710 PF00288 GHMP kinases N terminal domain PACID_26710 PF08544 GHMP kinases C terminal PACID_26720 PF01070 FMN-dependent dehydrogenase PACID_26730 PF00872 Transposase, Mutator family PACID_26780 PF00391 PEP-utilising enzyme, mobile domain PACID_26780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PACID_26810 PF17760 UvrA interaction domain PACID_26810 PF17755 UvrA DNA-binding domain PACID_26830 PF07859 alpha/beta hydrolase fold PACID_26850 PF03033 Glycosyltransferase family 28 N-terminal domain PACID_27030 PF00005 ABC transporter PACID_27040 PF12399 Branched-chain amino acid ATP-binding cassette transporter PACID_27040 PF00005 ABC transporter PACID_27050 PF02653 Branched-chain amino acid transport system / permease component PACID_27050 PF11862 Domain of unknown function (DUF3382) PACID_27060 PF02653 Branched-chain amino acid transport system / permease component PACID_27070 PF00528 Binding-protein-dependent transport system inner membrane component PACID_27120 PF00586 AIR synthase related protein, N-terminal domain PACID_27120 PF02769 AIR synthase related protein, C-terminal domain PACID_27130 PF00156 Phosphoribosyl transferase domain PACID_27150 PF07687 Peptidase dimerisation domain PACID_27150 PF01546 Peptidase family M20/M25/M40 PACID_27190 PF01145 SPFH domain / Band 7 family PACID_27200 PF00586 AIR synthase related protein, N-terminal domain PACID_27200 PF02769 AIR synthase related protein, C-terminal domain PACID_27200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain PACID_27230 PF00710 Asparaginase, N-terminal PACID_27230 PF17763 Glutaminase/Asparaginase C-terminal domain PACID_27240 PF00324 Amino acid permease PACID_27250 PF01433 Peptidase family M1 domain PACID_27250 PF11838 ERAP1-like C-terminal domain PACID_27260 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PACID_27260 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PACID_27280 PF01259 SAICAR synthetase PACID_27290 PF10417 C-terminal domain of 1-Cys peroxiredoxin PACID_27290 PF00578 AhpC/TSA family PACID_27300 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_27300 PF13192 Thioredoxin domain PACID_27310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_27310 PF03466 LysR substrate binding domain PACID_27320 PF10397 Adenylosuccinate lyase C-terminus PACID_27320 PF00206 Lyase PACID_27330 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PACID_27330 PF02844 Phosphoribosylglycinamide synthetase, N domain PACID_27330 PF02843 Phosphoribosylglycinamide synthetase, C domain PACID_27350 PF07704 Rv0623-like transcription factor PACID_27360 PF01850 PIN domain PACID_27370 PF00709 Adenylosuccinate synthetase PACID_27400 PF02583 Metal-sensitive transcriptional repressor PACID_27410 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_27410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_27440 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PACID_27470 PF02397 Bacterial sugar transferase PACID_27480 PF01571 Aminomethyltransferase folate-binding domain PACID_27490 PF08768 Domain of unknown function (DUF1794) PACID_27510 PF02580 D-Tyr-tRNA(Tyr) deacylase PACID_27570 PF00486 Transcriptional regulatory protein, C terminal PACID_27580 PF13090 Polyphosphate kinase C-terminal domain 2 PACID_27580 PF17941 Polyphosphate kinase C-terminal domain 1 PACID_27580 PF02503 Polyphosphate kinase middle domain PACID_27580 PF13089 Polyphosphate kinase N-terminal domain PACID_27590 PF00300 Histidine phosphatase superfamily (branch 1) PACID_27590 PF00293 NUDIX domain PACID_27600 PF12849 PBP superfamily domain PACID_27610 PF00528 Binding-protein-dependent transport system inner membrane component PACID_27620 PF00528 Binding-protein-dependent transport system inner membrane component PACID_27630 PF00005 ABC transporter PACID_27640 PF00830 Ribosomal L28 family PACID_27660 PF00872 Transposase, Mutator family PACID_27670 PF01783 Ribosomal L32p protein family PACID_27690 PF01197 Ribosomal protein L31 PACID_27700 PF00471 Ribosomal protein L33 PACID_27720 PF02492 CobW/HypB/UreG, nucleotide-binding domain PACID_27720 PF07683 Cobalamin synthesis protein cobW C-terminal domain PACID_27750 PF00950 ABC 3 transport family PACID_27760 PF00005 ABC transporter PACID_27780 PF01297 Zinc-uptake complex component A periplasmic PACID_27790 PF01497 Periplasmic binding protein PACID_27800 PF01032 FecCD transport family PACID_27810 PF01032 FecCD transport family PACID_27820 PF00005 ABC transporter PACID_27830 PF08021 Siderophore-interacting FAD-binding domain PACID_27830 PF04954 Siderophore-interacting protein PACID_27840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_27840 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_27860 PF00920 Dehydratase family PACID_27870 PF00291 Pyridoxal-phosphate dependent enzyme PACID_27870 PF00585 C-terminal regulatory domain of Threonine dehydratase PACID_27880 PF00999 Sodium/hydrogen exchanger family PACID_27890 PF03176 MMPL family PACID_27900 PF16901 C-terminal domain of alpha-glycerophosphate oxidase PACID_27900 PF01266 FAD dependent oxidoreductase PACID_27940 PF01578 Cytochrome C assembly protein PACID_27960 PF02683 Cytochrome C biogenesis protein transmembrane region PACID_27970 PF08534 Redoxin PACID_27980 PF00300 Histidine phosphatase superfamily (branch 1) PACID_27990 PF10414 Sirohaem synthase dimerisation region PACID_27990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_27990 PF14824 Sirohaem biosynthesis protein central PACID_28010 PF06971 Putative DNA-binding protein N-terminus PACID_28010 PF02629 CoA binding domain PACID_28030 PF14748 Pyrroline-5-carboxylate reductase dimerisation PACID_28030 PF03807 NADP oxidoreductase coenzyme F420-dependent PACID_28040 PF02774 Semialdehyde dehydrogenase, dimerisation domain PACID_28040 PF01118 Semialdehyde dehydrogenase, NAD binding domain PACID_28060 PF01619 Proline dehydrogenase PACID_28070 PF01261 Xylose isomerase-like TIM barrel PACID_28100 PF18073 Rubredoxin metal binding domain PACID_28100 PF06745 KaiC PACID_28110 PF02457 DisA bacterial checkpoint controller nucleotide-binding PACID_28110 PF10635 DisA bacterial checkpoint controller linker region PACID_28140 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PACID_28140 PF01488 Shikimate / quinate 5-dehydrogenase PACID_28140 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PACID_28150 PF01208 Uroporphyrinogen decarboxylase (URO-D) PACID_28160 PF01593 Flavin containing amine oxidoreductase PACID_28170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PACID_28170 PF03900 Porphobilinogen deaminase, C-terminal domain PACID_28200 PF00490 Delta-aminolevulinic acid dehydratase PACID_28210 PF00202 Aminotransferase class-III PACID_28220 PF00730 HhH-GPD superfamily base excision DNA repair protein PACID_28220 PF00633 Helix-hairpin-helix motif PACID_28220 PF10576 Iron-sulfur binding domain of endonuclease III PACID_28240 PF00005 ABC transporter PACID_28240 PF08402 TOBE domain PACID_28260 PF01547 Bacterial extracellular solute-binding protein PACID_28270 PF00485 Phosphoribulokinase / Uridine kinase family PACID_28280 PF01694 Rhomboid family PACID_28290 PF08338 Domain of unknown function (DUF1731) PACID_28290 PF01370 NAD dependent epimerase/dehydratase family PACID_28300 PF07690 Major Facilitator Superfamily PACID_28390 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_28390 PF02558 Ketopantoate reductase PanE/ApbA PACID_28400 PF07724 AAA domain (Cdc48 subfamily) PACID_28400 PF17871 AAA lid domain PACID_28400 PF02861 Clp amino terminal domain, pathogenicity island component PACID_28400 PF00004 ATPase family associated with various cellular activities (AAA) PACID_28400 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_28420 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PACID_28450 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PACID_28460 PF02152 Dihydroneopterin aldolase PACID_28470 PF00809 Pterin binding enzyme PACID_28480 PF01227 GTP cyclohydrolase I PACID_28510 PF01171 PP-loop family PACID_28520 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PACID_28530 PF00719 Inorganic pyrophosphatase PACID_28550 PF05448 Acetyl xylan esterase (AXE1) PACID_28590 PF00909 Ammonium Transporter Family PACID_28600 PF00543 Nitrogen regulatory protein P-II PACID_28650 PF01037 Lrp/AsnC ligand binding domain PACID_28660 PF17676 LD-carboxypeptidase C-terminal domain PACID_28660 PF02016 LD-carboxypeptidase N-terminal domain PACID_28670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_28670 PF00005 ABC transporter PACID_28680 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_28680 PF00528 Binding-protein-dependent transport system inner membrane component PACID_28690 PF00528 Binding-protein-dependent transport system inner membrane component PACID_28700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_28730 PF00958 GMP synthase C terminal domain PACID_28730 PF00117 Glutamine amidotransferase class-I PACID_28740 PF03358 NADPH-dependent FMN reductase PACID_28750 PF01593 Flavin containing amine oxidoreductase PACID_28820 PF00561 alpha/beta hydrolase fold PACID_28830 PF04468 PSP1 C-terminal conserved region PACID_28850 PF12169 DNA polymerase III subunits gamma and tau domain III PACID_28860 PF02223 Thymidylate kinase PACID_28880 PF13368 Topoisomerase C-terminal repeat PACID_28880 PF01131 DNA topoisomerase PACID_28880 PF01751 Toprim domain PACID_28900 PF17827 PrmC N-terminal domain PACID_28900 PF05175 Methyltransferase small domain PACID_28920 PF09369 Domain of unknown function (DUF1998) PACID_28920 PF00270 DEAD/DEAH box helicase PACID_28920 PF00271 Helicase conserved C-terminal domain PACID_28950 PF05016 ParE toxin of type II toxin-antitoxin system, parDE PACID_29060 PF00437 Type II/IV secretion system protein PACID_29100 PF00293 NUDIX domain PACID_29110 PF08534 Redoxin PACID_29120 PF00730 HhH-GPD superfamily base excision DNA repair protein PACID_29120 PF10576 Iron-sulfur binding domain of endonuclease III PACID_29120 PF00633 Helix-hairpin-helix motif PACID_29130 PF13545 Crp-like helix-turn-helix domain PACID_29130 PF00027 Cyclic nucleotide-binding domain PACID_29160 PF02467 Transcription factor WhiB PACID_29170 PF00905 Penicillin binding protein transpeptidase domain PACID_29170 PF00912 Transglycosylase PACID_29180 PF10518 TAT (twin-arginine translocation) pathway signal sequence PACID_29180 PF00149 Calcineurin-like phosphoesterase PACID_29220 PF00324 Amino acid permease PACID_29230 PF02574 Homocysteine S-methyltransferase PACID_29240 PF01047 MarR family PACID_29310 PF00528 Binding-protein-dependent transport system inner membrane component PACID_29320 PF12911 N-terminal TM domain of oligopeptide transport permease C PACID_29320 PF00528 Binding-protein-dependent transport system inner membrane component PACID_29330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_29330 PF00005 ABC transporter PACID_29340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_29340 PF00005 ABC transporter PACID_29370 PF03883 Peroxide stress protein YaaA PACID_29380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PACID_29390 PF07859 alpha/beta hydrolase fold PACID_29400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_29400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_29420 PF04542 Sigma-70 region 2 PACID_29420 PF00140 Sigma-70 factor, region 1.2 PACID_29420 PF04545 Sigma-70, region 4 PACID_29420 PF04539 Sigma-70 region 3 PACID_29440 PF02146 Sir2 family PACID_29460 PF01554 MatE PACID_29470 PF02824 TGS domain PACID_29470 PF13291 ACT domain PACID_29470 PF04607 Region found in RelA / SpoT proteins PACID_29490 PF00561 alpha/beta hydrolase fold PACID_29520 PF04226 Transglycosylase associated protein PACID_29540 PF13462 Thioredoxin PACID_29540 PF06965 Na+/H+ antiporter 1 PACID_29560 PF00196 Bacterial regulatory proteins, luxR family PACID_29560 PF00072 Response regulator receiver domain PACID_29610 PF13298 DNA polymerase Ligase (LigD) PACID_29610 PF04679 ATP dependent DNA ligase C terminal region PACID_29610 PF01068 ATP dependent DNA ligase domain PACID_29620 PF00067 Cytochrome P450 PACID_29640 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_29640 PF14759 Reductase C-terminal PACID_29650 PF00210 Ferritin-like domain PACID_29680 PF03631 Virulence factor BrkB PACID_29720 PF00141 Peroxidase PACID_29730 PF01475 Ferric uptake regulator family PACID_29770 PF06150 ChaB PACID_29780 PF00248 Aldo/keto reductase family PACID_29810 PF02705 K+ potassium transporter PACID_29820 PF02702 Osmosensitive K+ channel His kinase sensor domain PACID_29820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_29820 PF13493 Domain of unknown function (DUF4118) PACID_29830 PF00486 Transcriptional regulatory protein, C terminal PACID_29830 PF00072 Response regulator receiver domain PACID_29860 PF18395 Cas3 C-terminal domain PACID_29860 PF18019 HD domain PACID_29860 PF00270 DEAD/DEAH box helicase PACID_29880 PF09344 CT1975-like protein PACID_29910 PF01867 CRISPR associated protein Cas1 PACID_29920 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) PACID_29930 PF00872 Transposase, Mutator family PACID_29940 PF00872 Transposase, Mutator family PACID_29990 PF08946 Osmosensory transporter coiled coil PACID_29990 PF00083 Sugar (and other) transporter PACID_30000 PF01134 Glucose inhibited division protein A PACID_30000 PF13932 GidA associated domain PACID_30020 PF09335 SNARE associated Golgi protein PACID_30040 PF00534 Glycosyl transferases group 1 PACID_30040 PF13439 Glycosyltransferase Family 4 PACID_30050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_30050 PF00512 His Kinase A (phospho-acceptor) domain PACID_30050 PF00989 PAS fold PACID_30050 PF11808 Phosphate regulon sensor protein PhoR PACID_30060 PF00486 Transcriptional regulatory protein, C terminal PACID_30060 PF00072 Response regulator receiver domain PACID_30070 PF02673 Bacitracin resistance protein BacA PACID_30080 PF01569 PAP2 superfamily PACID_30090 PF03649 Uncharacterised protein family (UPF0014) PACID_30110 PF00155 Aminotransferase class I and II PACID_30110 PF00392 Bacterial regulatory proteins, gntR family PACID_30120 PF00106 short chain dehydrogenase PACID_30130 PF00202 Aminotransferase class-III PACID_30140 PF00872 Transposase, Mutator family PACID_30150 PF00106 short chain dehydrogenase PACID_30170 PF00571 CBS domain PACID_30170 PF01380 SIS domain PACID_30180 PF00294 pfkB family carbohydrate kinase PACID_30180 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) PACID_30200 PF01547 Bacterial extracellular solute-binding protein PACID_30210 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30220 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30240 PF00356 Bacterial regulatory proteins, lacI family PACID_30250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_30250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_30260 PF08240 Alcohol dehydrogenase GroES-like domain PACID_30260 PF00107 Zinc-binding dehydrogenase PACID_30270 PF13936 Helix-turn-helix domain PACID_30270 PF04198 Putative sugar-binding domain PACID_30280 PF01791 DeoC/LacD family aldolase PACID_30290 PF08240 Alcohol dehydrogenase GroES-like domain PACID_30290 PF00107 Zinc-binding dehydrogenase PACID_30320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_30320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_30330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_30330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_30340 PF14552 Tautomerase enzyme PACID_30370 PF03330 Lytic transglycolase PACID_30400 PF03591 AzlC protein PACID_30430 PF00155 Aminotransferase class I and II PACID_30440 PF05872 Bacterial protein of unknown function (DUF853) PACID_30470 PF02080 TrkA-C domain PACID_30470 PF03471 Transporter associated domain PACID_30470 PF00999 Sodium/hydrogen exchanger family PACID_30490 PF00005 ABC transporter PACID_30490 PF00571 CBS domain PACID_30510 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30530 PF00144 Beta-lactamase PACID_30570 PF00892 EamA-like transporter family PACID_30590 PF00550 Phosphopantetheine attachment site PACID_30590 PF00698 Acyl transferase domain PACID_30590 PF08240 Alcohol dehydrogenase GroES-like domain PACID_30590 PF14765 Polyketide synthase dehydratase PACID_30590 PF16197 Ketoacyl-synthetase C-terminal extension PACID_30590 PF08659 KR domain PACID_30590 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_30590 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_30630 PF14437 MafB19-like deaminase PACID_30700 PF07690 Major Facilitator Superfamily PACID_30710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_30710 PF00128 Alpha amylase, catalytic domain PACID_30730 PF16884 N-terminal domain of oxidoreductase PACID_30730 PF00107 Zinc-binding dehydrogenase PACID_30740 PF00326 Prolyl oligopeptidase family PACID_30740 PF07676 WD40-like Beta Propeller Repeat PACID_30750 PF03009 Glycerophosphoryl diester phosphodiesterase family PACID_30800 PF03816 Cell envelope-related transcriptional attenuator domain PACID_30810 PF00356 Bacterial regulatory proteins, lacI family PACID_30820 PF08544 GHMP kinases C terminal PACID_30820 PF10509 Galactokinase galactose-binding signature PACID_30820 PF00288 GHMP kinases N terminal domain PACID_30890 PF00550 Phosphopantetheine attachment site PACID_30890 PF00698 Acyl transferase domain PACID_30890 PF14765 Polyketide synthase dehydratase PACID_30890 PF00107 Zinc-binding dehydrogenase PACID_30890 PF08659 KR domain PACID_30890 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_30890 PF16197 Ketoacyl-synthetase C-terminal extension PACID_30890 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_30890 PF08240 Alcohol dehydrogenase GroES-like domain PACID_30900 PF00764 Arginosuccinate synthase PACID_30950 PF00356 Bacterial regulatory proteins, lacI family PACID_30980 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30990 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31000 PF00232 Glycosyl hydrolase family 1 PACID_31020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_31020 PF02403 Seryl-tRNA synthetase N-terminal domain PACID_31040 PF01842 ACT domain PACID_31040 PF00800 Prephenate dehydratase PACID_31060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PACID_31080 PF00842 Alanine racemase, C-terminal domain PACID_31080 PF01168 Alanine racemase, N-terminal domain PACID_31100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_31100 PF02817 e3 binding domain PACID_31100 PF00364 Biotin-requiring enzyme PACID_31110 PF02779 Transketolase, pyrimidine binding domain PACID_31110 PF02780 Transketolase, C-terminal domain PACID_31120 PF00676 Dehydrogenase E1 component PACID_31200 PF00083 Sugar (and other) transporter PACID_31200 PF08946 Osmosensory transporter coiled coil PACID_31210 PF01546 Peptidase family M20/M25/M40 PACID_31210 PF07687 Peptidase dimerisation domain PACID_31220 PF00155 Aminotransferase class I and II PACID_31230 PF01321 Creatinase/Prolidase N-terminal domain PACID_31230 PF00557 Metallopeptidase family M24 PACID_31240 PF07729 FCD domain PACID_31240 PF00392 Bacterial regulatory proteins, gntR family PACID_31260 PF00171 Aldehyde dehydrogenase family PACID_31310 PF01425 Amidase PACID_31320 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_31320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_31350 PF00005 ABC transporter PACID_31360 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31370 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31390 PF03636 Glycosyl hydrolase family 65, N-terminal domain PACID_31390 PF03632 Glycosyl hydrolase family 65 central catalytic domain PACID_31390 PF03633 Glycosyl hydrolase family 65, C-terminal domain PACID_31400 PF01022 Bacterial regulatory protein, arsR family PACID_31450 PF04945 YHS domain PACID_31460 PF04471 Restriction endonuclease PACID_31460 PF14338 Mrr N-terminal domain PACID_31500 PF00111 2Fe-2S iron-sulfur cluster binding domain PACID_31500 PF00970 Oxidoreductase FAD-binding domain PACID_31500 PF00175 Oxidoreductase NAD-binding domain PACID_31530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_31530 PF00512 His Kinase A (phospho-acceptor) domain PACID_31530 PF00672 HAMP domain PACID_31540 PF00486 Transcriptional regulatory protein, C terminal PACID_31540 PF00072 Response regulator receiver domain PACID_31560 PF00251 Glycosyl hydrolases family 32 N-terminal domain PACID_31560 PF08244 Glycosyl hydrolases family 32 C terminal PACID_31570 PF04198 Putative sugar-binding domain PACID_31580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_31580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_31590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_31590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_31600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_31600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_31600 PF01842 ACT domain PACID_31610 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_31620 PF00248 Aldo/keto reductase family PACID_31630 PF01791 DeoC/LacD family aldolase PACID_31640 PF00107 Zinc-binding dehydrogenase PACID_31640 PF08240 Alcohol dehydrogenase GroES-like domain PACID_31660 PF00083 Sugar (and other) transporter PACID_31710 PF00115 Cytochrome C and Quinol oxidase polypeptide I PACID_31740 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31750 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31760 PF01547 Bacterial extracellular solute-binding protein PACID_31780 PF02839 Carbohydrate binding domain PACID_31780 PF00150 Cellulase (glycosyl hydrolase family 5) PACID_31830 PF01183 Glycosyl hydrolases family 25 PACID_31860 PF14310 Fibronectin type III-like domain PACID_31860 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_31860 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_31870 PF00128 Alpha amylase, catalytic domain PACID_31890 PF13416 Bacterial extracellular solute-binding protein PACID_31900 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31910 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31930 PF02308 MgtC family PACID_31960 PF00135 Carboxylesterase family PACID_31970 PF00480 ROK family PACID_32000 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32020 PF00128 Alpha amylase, catalytic domain PACID_32040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_32050 PF00005 ABC transporter PACID_32050 PF00664 ABC transporter transmembrane region PACID_32060 PF00664 ABC transporter transmembrane region PACID_32060 PF00005 ABC transporter PACID_32070 PF01451 Low molecular weight phosphotyrosine protein phosphatase PACID_32090 PF02423 Ornithine cyclodeaminase/mu-crystallin family PACID_32110 PF07944 Beta-L-arabinofuranosidase, GH127 PACID_32130 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32140 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32160 PF00356 Bacterial regulatory proteins, lacI family PACID_32180 PF00486 Transcriptional regulatory protein, C terminal PACID_32180 PF00072 Response regulator receiver domain PACID_32190 PF00512 His Kinase A (phospho-acceptor) domain PACID_32190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_32190 PF00672 HAMP domain PACID_32210 PF00293 NUDIX domain PACID_32220 PF02674 Colicin V production protein PACID_32230 PF16916 Dimerisation domain of Zinc Transporter PACID_32230 PF01545 Cation efflux family PACID_32260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PACID_32270 PF00690 Cation transporter/ATPase, N-terminus PACID_32270 PF00689 Cation transporting ATPase, C-terminus PACID_32290 PF02673 Bacitracin resistance protein BacA PACID_32300 PF00398 Ribosomal RNA adenine dimethylase PACID_32320 PF03948 Ribosomal protein L9, C-terminal domain PACID_32320 PF01281 Ribosomal protein L9, N-terminal domain PACID_32330 PF01084 Ribosomal protein S18 PACID_32340 PF00436 Single-strand binding protein family PACID_32350 PF01250 Ribosomal protein S6 PACID_32360 PF10518 TAT (twin-arginine translocation) pathway signal sequence PACID_32360 PF04261 Dyp-type peroxidase family PACID_32370 PF13473 Cupredoxin-like domain PACID_32370 PF09375 Imelysin PACID_32380 PF03239 Iron permease FTR1 family PACID_32400 PF00501 AMP-binding enzyme PACID_32420 PF01261 Xylose isomerase-like TIM barrel PACID_32430 PF00106 short chain dehydrogenase PACID_32500 PF14759 Reductase C-terminal PACID_32500 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_32510 PF00155 Aminotransferase class I and II PACID_32520 PF01565 FAD binding domain PACID_32520 PF02913 FAD linked oxidases, C-terminal domain PACID_32560 PF00196 Bacterial regulatory proteins, luxR family PACID_32560 PF00072 Response regulator receiver domain PACID_32570 PF09594 Glycosyltransferase family 87 PACID_32580 PF00005 ABC transporter PACID_32670 PF02687 FtsX-like permease family PACID_32670 PF00005 ABC transporter PACID_32670 PF12704 MacB-like periplasmic core domain PACID_32680 PF07730 Histidine kinase PACID_32680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_32690 PF13183 4Fe-4S dicluster domain PACID_32690 PF02754 Cysteine-rich domain PACID_32700 PF00890 FAD binding domain PACID_32710 PF01266 FAD dependent oxidoreductase PACID_32710 PF04324 BFD-like [2Fe-2S] binding domain PACID_32720 PF01047 MarR family PACID_32730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_32730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_32750 PF00324 Amino acid permease PACID_32770 PF04264 YceI-like domain PACID_32800 PF13175 AAA ATPase domain PACID_32830 PF01554 MatE PACID_32870 PF00294 pfkB family carbohydrate kinase PACID_32890 PF04073 Aminoacyl-tRNA editing domain PACID_32910 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32920 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32960 PF02585 GlcNAc-PI de-N-acetylase PACID_33010 PF08244 Glycosyl hydrolases family 32 C terminal PACID_33010 PF00251 Glycosyl hydrolases family 32 N-terminal domain PACID_33020 PF00294 pfkB family carbohydrate kinase PACID_33030 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system PACID_33040 PF01402 Ribbon-helix-helix protein, copG family PACID_33050 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin PACID_33060 PF01850 PIN domain PACID_33070 PF02540 NAD synthase PACID_33070 PF00795 Carbon-nitrogen hydrolase PACID_33080 PF00355 Rieske [2Fe-2S] domain PACID_33100 PF01061 ABC-2 type transporter PACID_33100 PF00005 ABC transporter PACID_33100 PF00498 FHA domain PACID_33110 PF00069 Protein kinase domain PACID_33140 PF00365 Phosphofructokinase PACID_33150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PACID_33150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PACID_33160 PF12146 Serine aminopeptidase, S33 PACID_33250 PF03734 L,D-transpeptidase catalytic domain PACID_33250 PF17964 Bacterial Ig domain PACID_33260 PF03330 Lytic transglycolase PACID_33270 PF00285 Citrate synthase, C-terminal domain PACID_33280 PF00962 Adenosine/AMP deaminase PACID_33320 PF02838 Glycosyl hydrolase family 20, domain 2 PACID_33320 PF00728 Glycosyl hydrolase family 20, catalytic domain PACID_33380 PF00654 Voltage gated chloride channel PACID_33400 PF05167 Uncharacterised ACR (DUF711) PACID_33440 PF10415 Fumarase C C-terminus PACID_33440 PF00206 Lyase PACID_33460 PF01964 Radical SAM ThiC family PACID_33460 PF13667 ThiC-associated domain PACID_33470 PF05076 Suppressor of fused protein (SUFU) PACID_33490 PF03051 Peptidase C1-like family PACID_33500 PF00005 ABC transporter PACID_33530 PF07690 Major Facilitator Superfamily PACID_33550 PF08220 DeoR-like helix-turn-helix domain PACID_33550 PF00455 DeoR C terminal sensor domain PACID_33560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PACID_33560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PACID_33590 PF00924 Mechanosensitive ion channel PACID_33600 PF02595 Glycerate kinase family PACID_33620 PF13735 tRNA nucleotidyltransferase domain 2 putative PACID_33620 PF12627 Probable RNA and SrmB- binding site of polymerase A PACID_33620 PF01743 Poly A polymerase head domain PACID_33630 PF00171 Aldehyde dehydrogenase family PACID_33640 PF01758 Sodium Bile acid symporter family PACID_33650 PF08240 Alcohol dehydrogenase GroES-like domain PACID_33650 PF00107 Zinc-binding dehydrogenase PACID_33690 PF04542 Sigma-70 region 2 PACID_33690 PF08281 Sigma-70, region 4 PACID_33710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_33710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_33730 PF00230 Major intrinsic protein PACID_33740 PF04198 Putative sugar-binding domain PACID_33760 PF17820 PDZ domain PACID_33760 PF13180 PDZ domain PACID_33790 PF00528 Binding-protein-dependent transport system inner membrane component PACID_33800 PF00528 Binding-protein-dependent transport system inner membrane component PACID_33810 PF13416 Bacterial extracellular solute-binding protein PACID_33830 PF06964 Alpha-L-arabinofuranosidase C-terminal domain PACID_33840 PF00356 Bacterial regulatory proteins, lacI family PACID_33850 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_33860 PF01638 HxlR-like helix-turn-helix PACID_33880 PF00849 RNA pseudouridylate synthase PACID_33890 PF00085 Thioredoxin PACID_33920 PF13195 Protein of unknown function (DUF4011) PACID_33920 PF13087 AAA domain PACID_33920 PF13086 AAA domain PACID_33920 PF13087 AAA domain PACID_33920 PF13195 Protein of unknown function (DUF4011) PACID_33920 PF13086 AAA domain PACID_33940 PF13492 GAF domain PACID_33940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_33940 PF07730 Histidine kinase PACID_33960 PF00923 Transaldolase/Fructose-6-phosphate aldolase PACID_33970 PF00107 Zinc-binding dehydrogenase PACID_33970 PF08240 Alcohol dehydrogenase GroES-like domain PACID_33980 PF01261 Xylose isomerase-like TIM barrel PACID_33990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_33990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_34000 PF00356 Bacterial regulatory proteins, lacI family PACID_34010 PF03466 LysR substrate binding domain PACID_34010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_34020 PF03601 Conserved hypothetical protein 698 PACID_34040 PF01261 Xylose isomerase-like TIM barrel PACID_34050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_34050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_34070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_34070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_34080 PF00083 Sugar (and other) transporter PACID_34090 PF00083 Sugar (and other) transporter PACID_34100 PF00356 Bacterial regulatory proteins, lacI family PACID_34110 PF00083 Sugar (and other) transporter PACID_34120 PF00356 Bacterial regulatory proteins, lacI family PACID_34130 PF01261 Xylose isomerase-like TIM barrel PACID_34140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_34140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_34150 PF01261 Xylose isomerase-like TIM barrel PACID_34160 PF00171 Aldehyde dehydrogenase family PACID_34190 PF00155 Aminotransferase class I and II PACID_34210 PF07478 D-ala D-ala ligase C-terminus PACID_34210 PF01820 D-ala D-ala ligase N-terminus PACID_34230 PF12823 Domain of unknown function (DUF3817) PACID_34240 PF13298 DNA polymerase Ligase (LigD) PACID_34240 PF04679 ATP dependent DNA ligase C terminal region PACID_34240 PF01068 ATP dependent DNA ligase domain PACID_34250 PF17762 HTH domain found in ParB protein PACID_34250 PF02195 ParB-like nuclease domain PACID_34260 PF13614 AAA domain PACID_34270 PF00872 Transposase, Mutator family PACID_34280 PF02527 rRNA small subunit methyltransferase G PACID_34290 PF00893 Small Multidrug Resistance protein PACID_34310 PF02096 60Kd inner membrane protein PACID_34320 PF01809 Putative membrane protein insertion efficiency factor PACID_34330 PF00825 Ribonuclease P