PACID_00010 PF00308 Bacterial dnaA protein PACID_00010 PF08299 Bacterial dnaA protein helix-turn-helix PACID_00020 PF00005 ABC transporter PACID_00030 PF02687 PACID_00030 PACID_00030 PF12704 MacB-like periplasmic core domain PACID_00050 PF00712 DNA polymerase III beta subunit, N-terminal domain PACID_00050 PF02767 DNA polymerase III beta subunit, central domain PACID_00050 PF02768 DNA polymerase III beta subunit, C-terminal domain PACID_00070 PF02463 RecF/RecN/SMC N terminal domain PACID_00080 PF05258 PACID_00080 PACID_00090 PF01869 BadF/BadG/BcrA/BcrD ATPase family PACID_00100 PF00204 DNA gyrase B PACID_00100 PF00986 DNA gyrase B subunit, carboxyl terminus PACID_00100 PF01751 Toprim domain PACID_00100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_00110 PF00521 DNA gyrase/topoisomerase IV, subunit A PACID_00110 PF03989 DNA gyrase C-terminal domain, beta-propeller PACID_00120 PF12089 PACID_00120 PACID_00130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_00140 PF00356 Bacterial regulatory proteins, lacI family PACID_00140 PF13377 Periplasmic binding protein-like domain PACID_00150 PF00005 ABC transporter PACID_00160 PF02653 PACID_00160 PACID_00170 PF13407 Periplasmic binding protein domain PACID_00180 PF00294 pfkB family carbohydrate kinase PACID_00190 PF05025 RbsD / FucU transport protein family PACID_00200 PF01061 PACID_00200 PACID_00210 PF00005 ABC transporter PACID_00220 PF06304 Protein of unknown function (DUF1048) PACID_00230 PF03551 Transcriptional regulator PadR-like family PACID_00240 PF13561 Enoyl-(Acyl carrier protein) reductase PACID_00270 PF13560 Helix-turn-helix domain PACID_00280 PF01850 PIN domain PACID_00290 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PACID_00310 PF00571 CBS domain PACID_00320 PF03600 Citrate transporter PACID_00330 PF07690 Major Facilitator Superfamily PACID_00340 PF13350 Tyrosine phosphatase family PACID_00350 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_00350 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_00360 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PACID_00360 PF02837 Glycosyl hydrolases family 2, sugar binding domain PACID_00360 PF02929 Beta galactosidase small chain PACID_00360 PF16353 PACID_00360 PACID_00370 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_00370 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_00370 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_00380 PF00390 Malic enzyme, N-terminal domain PACID_00380 PF03949 Malic enzyme, NAD binding domain PACID_00390 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_00390 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_00400 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain PACID_00400 PF00364 Biotin-requiring enzyme PACID_00400 PF00682 HMGL-like PACID_00400 PF02436 Conserved carboxylase domain PACID_00400 PF02785 Biotin carboxylase C-terminal domain PACID_00400 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_00410 PF01717 Cobalamin-independent synthase, Catalytic domain PACID_00420 PF00583 Acetyltransferase (GNAT) family PACID_00430 PF01844 HNH endonuclease PACID_00430 PF02720 PACID_00430 PACID_00460 PF03477 ATP cone domain PACID_00460 PF13597 Anaerobic ribonucleoside-triphosphate reductase PACID_00470 PF13353 4Fe-4S single cluster domain PACID_00480 PF01402 Ribbon-helix-helix protein, copG family PACID_00510 PF00801 PKD domain PACID_00590 PF00005 ABC transporter PACID_00610 PF07726 ATPase family associated with various cellular activities (AAA) PACID_00620 PF01882 PACID_00620 PACID_00640 PF00092 von Willebrand factor type A domain PACID_00650 PF13519 von Willebrand factor type A domain PACID_00710 PF02412 Thrombospondin type 3 repeat PACID_00720 PF13359 PACID_00720 PACID_00730 PF00801 PKD domain PACID_00730 PF13472 GDSL-like Lipase/Acylhydrolase family PACID_00740 PF00872 PACID_00740 PACID_00770 PF01381 Helix-turn-helix PACID_00780 PF05973 PACID_00780 PACID_00800 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin PACID_00810 PF00005 ABC transporter PACID_00820 PF01032 FecCD transport family PACID_00830 PF01497 Periplasmic binding protein PACID_00840 PF12801 PACID_00840 PACID_00850 PF03713 Domain of unknown function (DUF305) PACID_00860 PF01522 Polysaccharide deacetylase PACID_00870 PF00122 E1-E2 ATPase PACID_00870 PF00702 haloacid dehalogenase-like hydrolase PACID_00880 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_00890 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_00890 PF00874 PRD domain PACID_00890 PF08279 HTH domain PACID_00900 PF00107 Zinc-binding dehydrogenase PACID_00900 PF08240 Alcohol dehydrogenase GroES-like domain PACID_00910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_00920 PF03611 PACID_00920 PACID_00930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_00940 PF03852 DNA mismatch endonuclease Vsr PACID_00950 PF00145 C-5 cytosine-specific DNA methylase PACID_00960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_00960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_00970 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PACID_00970 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PACID_01000 PF08282 haloacid dehalogenase-like hydrolase PACID_01020 PF00005 ABC transporter PACID_01030 PF00392 Bacterial regulatory proteins, gntR family PACID_01040 PF03099 Biotin/lipoate A/B protein ligase family PACID_01050 PF00113 Enolase, C-terminal TIM barrel domain PACID_01050 PF03952 Enolase, N-terminal domain PACID_01070 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_01070 PF00528 Binding-protein-dependent transport system inner membrane component PACID_01080 PF00005 ABC transporter PACID_01090 PF00155 Aminotransferase class I and II PACID_01100 PF01734 Patatin-like phospholipase PACID_01110 PF01547 Bacterial extracellular solute-binding protein PACID_01120 PF00528 Binding-protein-dependent transport system inner membrane component PACID_01130 PF00528 Binding-protein-dependent transport system inner membrane component PACID_01140 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase PACID_01150 PF13552 PACID_01150 PACID_01180 PF01380 SIS domain PACID_01190 PF13302 Acetyltransferase (GNAT) domain PACID_01220 PF08666 SAF domain PACID_01250 PF00437 Type II/IV secretion system protein PACID_01260 PF00482 Type II secretion system (T2SS), protein F PACID_01290 PF07811 PACID_01290 PACID_01310 PF01476 LysM domain PACID_01320 PF00171 Aldehyde dehydrogenase family PACID_01340 PF02558 Ketopantoate reductase PanE/ApbA PACID_01340 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_01350 PF07690 Major Facilitator Superfamily PACID_01360 PF00196 Bacterial regulatory proteins, luxR family PACID_01380 PF01909 Nucleotidyltransferase domain PACID_01390 PF01934 Protein of unknown function DUF86 PACID_01400 PF01268 Formate--tetrahydrofolate ligase PACID_01440 PF02687 PACID_01440 PACID_01440 PF12704 MacB-like periplasmic core domain PACID_01450 PF00005 ABC transporter PACID_01460 PF00072 Response regulator receiver domain PACID_01460 PF00196 Bacterial regulatory proteins, luxR family PACID_01470 PF01381 Helix-turn-helix PACID_01490 PF05973 PACID_01490 PACID_01500 PF01139 tRNA-splicing ligase RtcB PACID_01510 PF07690 Major Facilitator Superfamily PACID_01520 PF00005 ABC transporter PACID_01520 PF00664 ABC transporter transmembrane region PACID_01550 PF13231 PACID_01550 PACID_01570 PF00512 His Kinase A (phospho-acceptor) domain PACID_01570 PF00672 HAMP domain PACID_01570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_01580 PF13231 PACID_01580 PACID_01590 PF07730 Histidine kinase PACID_01610 PF00512 His Kinase A (phospho-acceptor) domain PACID_01610 PF00672 HAMP domain PACID_01610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_01620 PF00072 Response regulator receiver domain PACID_01620 PF00486 Transcriptional regulatory protein, C terminal PACID_01640 PF00394 Multicopper oxidase PACID_01640 PF07731 Multicopper oxidase PACID_01640 PF07732 Multicopper oxidase PACID_01670 PF02683 PACID_01670 PACID_01680 PF00578 AhpC/TSA family PACID_01690 PF01370 NAD dependent epimerase/dehydratase family PACID_01710 PF01507 Phosphoadenosine phosphosulfate reductase family PACID_01720 PF01507 Phosphoadenosine phosphosulfate reductase family PACID_01730 PF00009 Elongation factor Tu GTP binding domain PACID_01740 PF01925 PACID_01740 PACID_01760 PF01037 AsnC family PACID_01760 PF13404 AsnC-type helix-turn-helix domain PACID_01770 PF07687 Peptidase dimerisation domain PACID_01780 PF11299 PACID_01780 PACID_01800 PF00248 Aldo/keto reductase family PACID_01810 PF06114 Domain of unknown function (DUF955) PACID_01820 PF01381 Helix-turn-helix PACID_01860 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel PACID_01860 PF08239 Bacterial SH3 domain PACID_01870 PF12697 Alpha/beta hydrolase family PACID_01880 PF02597 ThiS family PACID_01890 PF05690 Thiazole biosynthesis protein ThiG PACID_01900 PF00899 ThiF family PACID_01920 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_01920 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_01920 PF14310 Fibronectin type III-like domain PACID_01930 PF00440 Bacterial regulatory proteins, tetR family PACID_01950 PF03176 MMPL family PACID_01960 PF12698 ABC-2 family transporter protein PACID_01970 PF00534 Glycosyl transferases group 1 PACID_01970 PF13439 Glycosyltransferase Family 4 PACID_01980 PF05653 PACID_01980 PACID_01980 PF13439 Glycosyltransferase Family 4 PACID_01990 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_01990 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_02000 PF00905 Penicillin binding protein transpeptidase domain PACID_02000 PF00912 Transglycosylase PACID_02010 PF03807 NADP oxidoreductase coenzyme F420-dependent PACID_02020 PF07690 Major Facilitator Superfamily PACID_02030 PF00440 Bacterial regulatory proteins, tetR family PACID_02040 PF07690 Major Facilitator Superfamily PACID_02050 PF06965 Na+/H+ antiporter 1 PACID_02060 PF01566 PACID_02060 PACID_02070 PF01325 Iron dependent repressor, N-terminal DNA binding domain PACID_02070 PF02742 Iron dependent repressor, metal binding and dimerisation domain PACID_02070 PF04023 FeoA domain PACID_02100 PF00390 Malic enzyme, N-terminal domain PACID_02100 PF03949 Malic enzyme, NAD binding domain PACID_02140 PF00708 Acylphosphatase PACID_02150 PF13380 CoA binding domain PACID_02150 PF13549 ATP-grasp domain PACID_02150 PF13607 Succinyl-CoA ligase like flavodoxin domain PACID_02160 PF01039 Carboxyl transferase domain PACID_02170 PF04277 PACID_02170 PACID_02180 PF00364 Biotin-requiring enzyme PACID_02190 PF03977 PACID_02190 PACID_02200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_02200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_02200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_02200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_02210 PF02687 PACID_02210 PACID_02220 PF00005 ABC transporter PACID_02230 PF00171 Aldehyde dehydrogenase family PACID_02270 PF00365 Phosphofructokinase PACID_02280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_02300 PF00528 Binding-protein-dependent transport system inner membrane component PACID_02300 PF12911 PACID_02300 PACID_02310 PF00528 Binding-protein-dependent transport system inner membrane component PACID_02330 PF07732 Multicopper oxidase PACID_02330 PF13473 Cupredoxin-like domain PACID_02350 PF04343 PACID_02350 PACID_02360 PF03745 Domain of unknown function (DUF309) PACID_02370 PF00122 E1-E2 ATPase PACID_02370 PF00702 haloacid dehalogenase-like hydrolase PACID_02380 PF00403 Heavy-metal-associated domain PACID_02390 PF00027 Cyclic nucleotide-binding domain PACID_02390 PF13545 Crp-like helix-turn-helix domain PACID_02400 PF00210 Ferritin-like domain PACID_02430 PF05016 Plasmid stabilisation system protein PACID_02440 PF01402 Ribbon-helix-helix protein, copG family PACID_02450 PF01402 Ribbon-helix-helix protein, copG family PACID_02460 PF14542 GCN5-related N-acetyl-transferase PACID_02470 PF13173 AAA domain PACID_02470 PF13635 PACID_02470 PACID_02480 PF00583 Acetyltransferase (GNAT) family PACID_02480 PF13410 Glutathione S-transferase, C-terminal domain PACID_02490 PF13409 Glutathione S-transferase, N-terminal domain PACID_02490 PF13410 Glutathione S-transferase, C-terminal domain PACID_02510 PF13409 Glutathione S-transferase, N-terminal domain PACID_02510 PF13410 Glutathione S-transferase, C-terminal domain PACID_02520 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_02530 PF00005 ABC transporter PACID_02530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_02540 PF00528 Binding-protein-dependent transport system inner membrane component PACID_02550 PF00528 Binding-protein-dependent transport system inner membrane component PACID_02560 PF00005 ABC transporter PACID_02560 PF00528 Binding-protein-dependent transport system inner membrane component PACID_02560 PF03459 TOBE domain PACID_02570 PF13531 Bacterial extracellular solute-binding protein PACID_02580 PF03459 TOBE domain PACID_02580 PF12728 Helix-turn-helix domain PACID_02590 PF00994 Probable molybdopterin binding domain PACID_02610 PF02452 PemK-like protein PACID_02620 PF12804 MobA-like NTP transferase domain PACID_02630 PF03063 Prismane/CO dehydrogenase family PACID_02640 PF00111 2Fe-2S iron-sulfur cluster binding domain PACID_02640 PF00175 Oxidoreductase NAD-binding domain PACID_02640 PF00970 Oxidoreductase FAD-binding domain PACID_02650 PF01613 Flavin reductase like domain PACID_02660 PF00067 Cytochrome P450 PACID_02670 PF07690 Major Facilitator Superfamily PACID_02680 PF00665 Integrase core domain PACID_02700 PF00384 Molybdopterin oxidoreductase PACID_02700 PF01568 Molydopterin dinucleotide binding domain PACID_02710 PF13247 4Fe-4S dicluster domain PACID_02710 PF14711 Respiratory nitrate reductase beta C-terminal PACID_02720 PF02613 Nitrate reductase delta subunit PACID_02730 PF02665 Nitrate reductase gamma subunit PACID_02740 PF12802 MarR family PACID_02750 PF04055 Radical SAM superfamily PACID_02750 PF06463 Molybdenum Cofactor Synthesis C PACID_02760 PF02597 ThiS family PACID_02770 PF02391 MoaE protein PACID_02780 PF00994 Probable molybdopterin binding domain PACID_02780 PF03453 MoeA N-terminal region (domain I and II) PACID_02780 PF03454 MoeA C-terminal region (domain IV) PACID_02790 PF01967 MoaC family PACID_02800 PF00994 Probable molybdopterin binding domain PACID_02820 PF08543 Phosphomethylpyrimidine kinase PACID_02830 PF02581 Thiamine monophosphate synthase/TENI PACID_02840 PF08450 SMP-30/Gluconolaconase/LRE-like region PACID_02860 PF00703 Glycosyl hydrolases family 2 PACID_02860 PF02837 Glycosyl hydrolases family 2, sugar binding domain PACID_02860 PF07691 PA14 domain PACID_02860 PF13385 Concanavalin A-like lectin/glucanases superfamily PACID_02870 PF02653 PACID_02870 PACID_02880 PF02653 PACID_02880 PACID_02890 PF00005 ABC transporter PACID_02900 PF13407 Periplasmic binding protein domain PACID_02910 PF00356 Bacterial regulatory proteins, lacI family PACID_02910 PF13377 Periplasmic binding protein-like domain PACID_02920 PF05257 CHAP domain PACID_02960 PF03577 PACID_02960 PACID_02970 PF00107 Zinc-binding dehydrogenase PACID_02970 PF08240 Alcohol dehydrogenase GroES-like domain PACID_02980 PF00171 Aldehyde dehydrogenase family PACID_02990 PF13347 MFS/sugar transport protein PACID_03000 PF00356 Bacterial regulatory proteins, lacI family PACID_03000 PF13377 Periplasmic binding protein-like domain PACID_03010 PF02614 Glucuronate isomerase PACID_03020 PF01232 Mannitol dehydrogenase Rossmann domain PACID_03020 PF08125 Mannitol dehydrogenase C-terminal domain PACID_03030 PF03786 D-mannonate dehydratase (UxuA) PACID_03050 PF00248 Aldo/keto reductase family PACID_03060 PF01063 Aminotransferase class IV PACID_03070 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain PACID_03070 PF13378 Enolase C-terminal domain-like PACID_03080 PF01380 SIS domain PACID_03100 PF01546 Peptidase family M20/M25/M40 PACID_03100 PF07687 Peptidase dimerisation domain PACID_03110 PF02308 PACID_03110 PACID_03120 PF02065 Melibiase PACID_03120 PF16875 PACID_03120 PACID_03130 PF00356 Bacterial regulatory proteins, lacI family PACID_03130 PF13377 Periplasmic binding protein-like domain PACID_03140 PF03009 Glycerophosphoryl diester phosphodiesterase family PACID_03180 PF13508 Acetyltransferase (GNAT) domain PACID_03190 PF08681 Protein of unknown function (DUF1778) PACID_03220 PF01610 PACID_03220 PACID_03220 PF14690 PACID_03220 PACID_03230 PF03235 PACID_03230 PACID_03250 PF00176 SNF2 family N-terminal domain PACID_03250 PF00271 Helicase conserved C-terminal domain PACID_03270 PF00270 DEAD/DEAH box helicase PACID_03270 PF00271 Helicase conserved C-terminal domain PACID_03270 PF09369 PACID_03270 PACID_03280 PF13245 Part of AAA domain PACID_03280 PF13361 UvrD-like helicase C-terminal domain PACID_03290 PF13245 Part of AAA domain PACID_03290 PF13361 UvrD-like helicase C-terminal domain PACID_03300 PF13701 PACID_03300 PACID_03310 PF00665 Integrase core domain PACID_03310 PF13011 PACID_03310 PACID_03320 PF00872 PACID_03320 PACID_03330 PF00440 Bacterial regulatory proteins, tetR family PACID_03360 PF13173 AAA domain PACID_03360 PF13635 PACID_03360 PACID_03370 PF00004 ATPase family associated with various cellular activities (AAA) PACID_03380 PF00117 Glutamine amidotransferase class-I PACID_03400 PF00440 Bacterial regulatory proteins, tetR family PACID_03410 PF13358 DDE superfamily endonuclease PACID_03410 PF13551 Winged helix-turn helix PACID_03410 PF13592 PACID_03410 PACID_03420 PF12697 Alpha/beta hydrolase family PACID_03430 PF01546 Peptidase family M20/M25/M40 PACID_03430 PF07687 Peptidase dimerisation domain PACID_03450 PF00440 Bacterial regulatory proteins, tetR family PACID_03470 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_03470 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_03480 PF00083 Sugar (and other) transporter PACID_03490 PF01261 Xylose isomerase-like TIM barrel PACID_03500 PF00480 ROK family PACID_03500 PF09339 IclR helix-turn-helix domain PACID_03510 PF01551 Peptidase family M23 PACID_03520 PF00795 Carbon-nitrogen hydrolase PACID_03530 PF13533 Biotin-lipoyl like PACID_03540 PF00005 ABC transporter PACID_03550 PF02687 PACID_03550 PACID_03550 PF12704 MacB-like periplasmic core domain PACID_03570 PF13437 HlyD family secretion protein PACID_03570 PF13533 Biotin-lipoyl like PACID_03580 PF04055 Radical SAM superfamily PACID_03580 PF13186 Iron-sulfur cluster-binding domain PACID_03590 PF00884 Sulfatase PACID_03590 PF12411 PACID_03590 PACID_03610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PACID_03620 PF07690 Major Facilitator Superfamily PACID_03630 PF00440 Bacterial regulatory proteins, tetR family PACID_03630 PF13977 Bacterial transcriptional repressor PACID_03640 PF00202 Aminotransferase class-III PACID_03650 PF01636 Phosphotransferase enzyme family PACID_03660 PF01238 Phosphomannose isomerase type I PACID_03670 PF00294 pfkB family carbohydrate kinase PACID_03680 PF01614 Bacterial transcriptional regulator PACID_03680 PF09339 IclR helix-turn-helix domain PACID_03690 PF01081 KDPG and KHG aldolase PACID_03700 PF00356 Bacterial regulatory proteins, lacI family PACID_03700 PF13377 Periplasmic binding protein-like domain PACID_03710 PF01232 Mannitol dehydrogenase Rossmann domain PACID_03710 PF08125 Mannitol dehydrogenase C-terminal domain PACID_03720 PF04295 PACID_03720 PACID_03720 PF08666 SAF domain PACID_03730 PF02614 Glucuronate isomerase PACID_03760 PF01402 Ribbon-helix-helix protein, copG family PACID_03790 PF01402 Ribbon-helix-helix protein, copG family PACID_03800 PF02614 Glucuronate isomerase PACID_03810 PF01232 Mannitol dehydrogenase Rossmann domain PACID_03830 PF13701 PACID_03830 PACID_03840 PF01527 Transposase PACID_03860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_03860 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_03870 PF00665 Integrase core domain PACID_03870 PF13936 Helix-turn-helix domain PACID_03890 PF01370 NAD dependent epimerase/dehydratase family PACID_03900 PF13347 MFS/sugar transport protein PACID_03910 PF00703 Glycosyl hydrolases family 2 PACID_03910 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PACID_03910 PF02837 Glycosyl hydrolases family 2, sugar binding domain PACID_03910 PF02929 Beta galactosidase small chain PACID_03910 PF16353 PACID_03910 PACID_03930 PF00872 PACID_03930 PACID_03940 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PACID_03950 PF13454 FAD-NAD(P)-binding PACID_03960 PF00291 Pyridoxal-phosphate dependent enzyme PACID_03970 PF16242 PACID_03970 PACID_03990 PF01695 IstB-like ATP binding protein PACID_04000 PF02374 Anion-transporting ATPase PACID_04010 PF12840 Helix-turn-helix domain PACID_04020 PF06953 Arsenical resistance operon trans-acting repressor ArsD PACID_04040 PF00665 Integrase core domain PACID_04050 PF01610 PACID_04050 PACID_04050 PF14690 PACID_04050 PACID_04060 PF13347 MFS/sugar transport protein PACID_04100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_04100 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_04110 PF06114 Domain of unknown function (DUF955) PACID_04130 PF09370 TIM-barrel signal transduction protein PACID_04140 PF06792 Uncharacterised protein family (UPF0261) PACID_04150 PF00155 Aminotransferase class I and II PACID_04150 PF00392 Bacterial regulatory proteins, gntR family PACID_04160 PF00107 Zinc-binding dehydrogenase PACID_04170 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_04170 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_04180 PF00356 Bacterial regulatory proteins, lacI family PACID_04180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family PACID_04190 PF13377 Periplasmic binding protein-like domain PACID_04200 PF05496 Holliday junction DNA helicase ruvB N-terminus PACID_04200 PF12002 MgsA AAA+ ATPase C terminal PACID_04200 PF16193 PACID_04200 PACID_04210 PF01569 PAP2 superfamily PACID_04220 PF00929 Exonuclease PACID_04230 PF00005 ABC transporter PACID_04240 PF14016 PACID_04240 PACID_04250 PF01546 Peptidase family M20/M25/M40 PACID_04250 PF07687 Peptidase dimerisation domain PACID_04260 PF13229 Right handed beta helix region PACID_04270 PF09335 PACID_04270 PACID_04280 PF00107 Zinc-binding dehydrogenase PACID_04280 PF08240 Alcohol dehydrogenase GroES-like domain PACID_04300 PF14016 PACID_04300 PACID_04310 PF00456 Transketolase, thiamine diphosphate binding domain PACID_04310 PF02779 Transketolase, pyrimidine binding domain PACID_04310 PF02780 Transketolase, C-terminal domain PACID_04320 PF08282 haloacid dehalogenase-like hydrolase PACID_04350 PF00583 Acetyltransferase (GNAT) family PACID_04360 PF00571 CBS domain PACID_04360 PF01595 PACID_04360 PACID_04370 PF00571 CBS domain PACID_04370 PF01595 PACID_04370 PACID_04370 PF03471 Transporter associated domain PACID_04380 PF03473 MOSC domain PACID_04390 PF13420 Acetyltransferase (GNAT) domain PACID_04410 PF01844 HNH endonuclease PACID_04410 PF02720 PACID_04410 PACID_04440 PF13738 Pyridine nucleotide-disulphide oxidoreductase PACID_04450 PF12697 Alpha/beta hydrolase family PACID_04470 PF01636 Phosphotransferase enzyme family PACID_04490 PF01451 Low molecular weight phosphotyrosine protein phosphatase PACID_04510 PF10012 PACID_04510 PACID_04530 PF00675 Insulinase (Peptidase family M16) PACID_04530 PF05193 Peptidase M16 inactive domain PACID_04540 PF00675 Insulinase (Peptidase family M16) PACID_04540 PF05193 Peptidase M16 inactive domain PACID_04550 PF00892 EamA-like transporter family PACID_04560 PF17249 PACID_04560 PACID_04570 PF00905 Penicillin binding protein transpeptidase domain PACID_04570 PF00912 Transglycosylase PACID_04600 PF04932 PACID_04600 PACID_04610 PF00535 Glycosyl transferase family 2 PACID_04630 PF04138 PACID_04630 PACID_04640 PF00534 Glycosyl transferases group 1 PACID_04650 PF00534 Glycosyl transferases group 1 PACID_04660 PF13524 Glycosyl transferases group 1 PACID_04670 PF04932 PACID_04670 PACID_04690 PF13692 Glycosyl transferases group 1 PACID_04700 PF04932 PACID_04700 PACID_04710 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_04710 PF14602 Hexapeptide repeat of succinyl-transferase PACID_04720 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family PACID_04730 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_04730 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_04760 PF00381 PTS HPr component phosphorylation site PACID_04770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_04770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_04780 PF00294 pfkB family carbohydrate kinase PACID_04790 PF00455 PACID_04790 PACID_04790 PF08220 DeoR-like helix-turn-helix domain PACID_04800 PF00528 Binding-protein-dependent transport system inner membrane component PACID_04810 PF00528 Binding-protein-dependent transport system inner membrane component PACID_04820 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_04830 PF00005 ABC transporter PACID_04850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PACID_04850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain PACID_04850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PACID_04860 PF04932 PACID_04860 PACID_04870 PF00534 Glycosyl transferases group 1 PACID_04870 PF13579 Glycosyl transferase 4-like domain PACID_04880 PF02350 UDP-N-acetylglucosamine 2-epimerase PACID_04890 PF13579 Glycosyl transferase 4-like domain PACID_04890 PF13692 Glycosyl transferases group 1 PACID_04950 PF00581 Rhodanese-like domain PACID_04960 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_04970 PF00293 NUDIX domain PACID_04980 PF00270 DEAD/DEAH box helicase PACID_04980 PF00271 Helicase conserved C-terminal domain PACID_04980 PF04408 Helicase associated domain (HA2) PACID_04980 PF08482 PACID_04980 PACID_04990 PF13579 Glycosyl transferase 4-like domain PACID_04990 PF13692 Glycosyl transferases group 1 PACID_05010 PF02245 Methylpurine-DNA glycosylase (MPG) PACID_05020 PF13563 2'-5' RNA ligase superfamily PACID_05040 PF08240 Alcohol dehydrogenase GroES-like domain PACID_05040 PF13602 Zinc-binding dehydrogenase PACID_05050 PF01047 MarR family PACID_05060 PF00255 Glutathione peroxidase PACID_05070 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_05080 PF00085 Thioredoxin PACID_05090 PF06965 Na+/H+ antiporter 1 PACID_05090 PF13462 Thioredoxin PACID_05100 PF00772 DnaB-like helicase N terminal domain PACID_05100 PF03796 DnaB-like helicase C terminal domain PACID_05110 PF02583 Metal-sensitive transcriptional repressor PACID_05120 PF00403 Heavy-metal-associated domain PACID_05130 PF00122 E1-E2 ATPase PACID_05130 PF00403 Heavy-metal-associated domain PACID_05130 PF00702 haloacid dehalogenase-like hydrolase PACID_05140 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel PACID_05140 PF03990 PACID_05140 PACID_05140 PF07501 G5 domain PACID_05160 PF01180 Dihydroorotate dehydrogenase PACID_05170 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PACID_05170 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PACID_05170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_05170 PF10371 Domain of unknown function PACID_05170 PF12838 4Fe-4S dicluster domain PACID_05170 PF17147 PACID_05170 PACID_05180 PF00037 4Fe-4S binding domain PACID_05180 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_05180 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PACID_05200 PF00392 Bacterial regulatory proteins, gntR family PACID_05200 PF07729 FCD domain PACID_05220 PF02652 PACID_05220 PACID_05230 PF02754 PACID_05230 PACID_05240 PF02589 Uncharacterised ACR, YkgG family COG1556 PACID_05240 PF13183 4Fe-4S dicluster domain PACID_05250 PF02589 Uncharacterised ACR, YkgG family COG1556 PACID_05260 PF00005 ABC transporter PACID_05260 PF00664 ABC transporter transmembrane region PACID_05270 PF00005 ABC transporter PACID_05270 PF00664 ABC transporter transmembrane region PACID_05280 PF02322 PACID_05280 PACID_05290 PF01654 PACID_05290 PACID_05300 PF03965 Penicillinase repressor PACID_05310 PF00196 Bacterial regulatory proteins, luxR family PACID_05330 PF01613 Flavin reductase like domain PACID_05340 PF13520 Amino acid permease PACID_05360 PF07690 Major Facilitator Superfamily PACID_05370 PF00465 Iron-containing alcohol dehydrogenase PACID_05380 PF01301 Glycosyl hydrolases family 35 PACID_05390 PF13416 Bacterial extracellular solute-binding protein PACID_05400 PF00528 Binding-protein-dependent transport system inner membrane component PACID_05410 PF00528 Binding-protein-dependent transport system inner membrane component PACID_05420 PF00665 Integrase core domain PACID_05430 PF00356 Bacterial regulatory proteins, lacI family PACID_05430 PF13377 Periplasmic binding protein-like domain PACID_05440 PF00005 ABC transporter PACID_05440 PF00664 ABC transporter transmembrane region PACID_05450 PF00005 ABC transporter PACID_05450 PF00664 ABC transporter transmembrane region PACID_05460 PF00440 Bacterial regulatory proteins, tetR family PACID_05470 PF13419 Haloacid dehalogenase-like hydrolase PACID_05500 PF00696 Amino acid kinase family PACID_05510 PF11392 PACID_05510 PACID_05520 PF06545 Protein of unknown function (DUF1116) PACID_05530 PF00549 CoA-ligase PACID_05530 PF02629 CoA binding domain PACID_05540 PF00392 Bacterial regulatory proteins, gntR family PACID_05540 PF07729 FCD domain PACID_05550 PF01925 PACID_05550 PACID_05560 PF01418 Helix-turn-helix domain, rpiR family PACID_05570 PF01546 Peptidase family M20/M25/M40 PACID_05570 PF07687 Peptidase dimerisation domain PACID_05580 PF00266 Aminotransferase class-V PACID_05590 PF01979 Amidohydrolase family PACID_05600 PF00375 Sodium:dicarboxylate symporter family PACID_05610 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PACID_05620 PF01177 Asp/Glu/Hydantoin racemase PACID_05630 PF01906 Putative heavy-metal-binding PACID_05640 PF00152 tRNA synthetases class II (D, K and N) PACID_05640 PF01336 OB-fold nucleic acid binding domain PACID_05650 PF06781 PACID_05650 PACID_05660 PF05949 Bacterial protein of unknown function (DUF881) PACID_05670 PF00117 Glutamine amidotransferase class-I PACID_05680 PF00069 Protein kinase domain PACID_05680 PF03793 PASTA domain PACID_05690 PF00905 Penicillin binding protein transpeptidase domain PACID_05700 PF01098 PACID_05700 PACID_05710 PF13672 Protein phosphatase 2C PACID_05720 PF00498 FHA domain PACID_05730 PF00498 FHA domain PACID_05730 PF12401 Protein of unknown function (DUF2662) PACID_05750 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase PACID_05750 PF04321 RmlD substrate binding domain PACID_05760 PF16363 PACID_05760 PACID_05770 PF00483 Nucleotidyl transferase PACID_05780 PF05901 PACID_05780 PACID_05780 PF07510 PACID_05780 PACID_05790 PF05592 Bacterial alpha-L-rhamnosidase PACID_05790 PF08531 Alpha-L-rhamnosidase N-terminal domain PACID_05790 PF17389 PACID_05790 PACID_05800 PF08240 Alcohol dehydrogenase GroES-like domain PACID_05800 PF13602 Zinc-binding dehydrogenase PACID_05810 PF02397 PACID_05810 PACID_05810 PF13727 CoA-binding domain PACID_05820 PF00534 Glycosyl transferases group 1 PACID_05820 PF13439 Glycosyltransferase Family 4 PACID_05830 PF03816 Cell envelope-related transcriptional attenuator domain PACID_05840 PF04892 PACID_05840 PACID_05850 PF00128 Alpha amylase, catalytic domain PACID_05850 PF11941 Domain of unknown function (DUF3459) PACID_05860 PF07927 YcfA-like protein PACID_05880 PF00128 Alpha amylase, catalytic domain PACID_05890 PF00083 Sugar (and other) transporter PACID_05900 PF03551 Transcriptional regulator PadR-like family PACID_05910 PF03109 PACID_05910 PACID_05930 PF13520 Amino acid permease PACID_05950 PF00440 Bacterial regulatory proteins, tetR family PACID_05960 PF00005 ABC transporter PACID_05970 PF01061 PACID_05970 PACID_05980 PF13520 Amino acid permease PACID_05990 PF00730 HhH-GPD superfamily base excision DNA repair protein PACID_06010 PF01479 S4 domain PACID_06030 PF12169 DNA polymerase III subunits gamma and tau domain III PACID_06030 PF13177 DNA polymerase III, delta subunit PACID_06040 PF02575 YbaB/EbfC DNA-binding family PACID_06050 PF02132 RecR protein PACID_06050 PF13662 Toprim domain PACID_06060 PF01910 Domain of unknown function DUF77 PACID_06070 PF07690 Major Facilitator Superfamily PACID_06080 PF01301 Glycosyl hydrolases family 35 PACID_06090 PF03551 Transcriptional regulator PadR-like family PACID_06090 PF10400 Virulence activator alpha C-term PACID_06100 PF00005 ABC transporter PACID_06110 PF02687 PACID_06110 PACID_06130 PF08282 haloacid dehalogenase-like hydrolase PACID_06140 PF08282 haloacid dehalogenase-like hydrolase PACID_06150 PF00133 tRNA synthetases class I (I, L, M and V) PACID_06150 PF08264 Anticodon-binding domain of tRNA PACID_06170 PF14542 GCN5-related N-acetyl-transferase PACID_06180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_06190 PF08044 PACID_06190 PACID_06200 PF00696 Amino acid kinase family PACID_06200 PF01842 ACT domain PACID_06200 PF13840 ACT domain PACID_06210 PF03023 PACID_06210 PACID_06220 PF00665 Integrase core domain PACID_06230 PF01522 Polysaccharide deacetylase PACID_06240 PF03741 PACID_06240 PACID_06250 PF07690 Major Facilitator Superfamily PACID_06260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_06260 PF03466 LysR substrate binding domain PACID_06270 PF00582 Universal stress protein family PACID_06280 PF02040 PACID_06280 PACID_06290 PF00582 Universal stress protein family PACID_06300 PF02537 PACID_06300 PACID_06310 PF02537 PACID_06310 PACID_06320 PF05257 CHAP domain PACID_06330 PF13701 PACID_06330 PACID_06340 PF00248 Aldo/keto reductase family PACID_06370 PF01083 Cutinase PACID_06380 PF01161 Phosphatidylethanolamine-binding protein PACID_06390 PF13563 2'-5' RNA ligase superfamily PACID_06400 PF00270 DEAD/DEAH box helicase PACID_06400 PF00271 Helicase conserved C-terminal domain PACID_06400 PF12029 PACID_06400 PACID_06410 PF01081 KDPG and KHG aldolase PACID_06420 PF00342 Phosphoglucose isomerase PACID_06430 PF02698 DUF218 domain PACID_06440 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PACID_06450 PF07690 Major Facilitator Superfamily PACID_06460 PF00248 Aldo/keto reductase family PACID_06470 PF00750 tRNA synthetases class I (R) PACID_06470 PF03485 Arginyl tRNA synthetase N terminal domain PACID_06470 PF05746 DALR anticodon binding domain PACID_06490 PF00480 ROK family PACID_06500 PF03703 PACID_06500 PACID_06510 PF03703 PACID_06510 PACID_06520 PF00083 Sugar (and other) transporter PACID_06530 PF08044 PACID_06530 PACID_06530 PF09922 Cell wall-active antibiotics response protein (DUF2154) PACID_06550 PF00171 Aldehyde dehydrogenase family PACID_06560 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_06570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_06570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_06580 PF06134 L-rhamnose isomerase (RhaA) PACID_06590 PF07690 Major Facilitator Superfamily PACID_06600 PF05336 Domain of unknown function (DUF718) PACID_06610 PF00356 Bacterial regulatory proteins, lacI family PACID_06610 PF13377 Periplasmic binding protein-like domain PACID_06620 PF14242 PACID_06620 PACID_06630 PF13561 Enoyl-(Acyl carrier protein) reductase PACID_06640 PF03547 PACID_06640 PACID_06650 PF07690 Major Facilitator Superfamily PACID_06670 PF00392 Bacterial regulatory proteins, gntR family PACID_06680 PF03631 PACID_06680 PACID_06690 PF00356 Bacterial regulatory proteins, lacI family PACID_06690 PF13377 Periplasmic binding protein-like domain PACID_06700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_06710 PF00528 Binding-protein-dependent transport system inner membrane component PACID_06720 PF00528 Binding-protein-dependent transport system inner membrane component PACID_06720 PF12911 PACID_06720 PACID_06730 PF00005 ABC transporter PACID_06730 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_06740 PF00206 Lyase PACID_06740 PF10415 Fumarase C C-terminus PACID_06750 PF08240 Alcohol dehydrogenase GroES-like domain PACID_06760 PF03807 NADP oxidoreductase coenzyme F420-dependent PACID_06760 PF14748 Pyrroline-5-carboxylate reductase dimerisation PACID_06790 PF13601 Winged helix DNA-binding domain PACID_06800 PF07690 Major Facilitator Superfamily PACID_06810 PF00440 Bacterial regulatory proteins, tetR family PACID_06830 PF01425 Amidase PACID_06840 PF00005 ABC transporter PACID_06860 PF01061 PACID_06860 PACID_06870 PF00005 ABC transporter PACID_06880 PF00440 Bacterial regulatory proteins, tetR family PACID_06890 PF00480 ROK family PACID_06900 PF02065 Melibiase PACID_06900 PF16875 PACID_06900 PACID_06910 PF10518 TAT (twin-arginine translocation) pathway signal sequence PACID_06910 PF13416 Bacterial extracellular solute-binding protein PACID_06920 PF00528 Binding-protein-dependent transport system inner membrane component PACID_06930 PF00528 Binding-protein-dependent transport system inner membrane component PACID_06940 PF13419 Haloacid dehalogenase-like hydrolase PACID_06950 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain PACID_06950 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PACID_06960 PF01263 Aldose 1-epimerase PACID_06970 PF12710 haloacid dehalogenase-like hydrolase PACID_06980 PF05175 Methyltransferase small domain PACID_06990 PF03618 PACID_06990 PACID_07000 PF00391 PEP-utilising enzyme, mobile domain PACID_07000 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PACID_07000 PF02896 PEP-utilising enzyme, TIM barrel domain PACID_07020 PF00498 FHA domain PACID_07030 PF06283 Trehalose utilisation PACID_07040 PF01791 DeoC/LacD family aldolase PACID_07050 PF00512 His Kinase A (phospho-acceptor) domain PACID_07050 PF00672 HAMP domain PACID_07050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_07060 PF00072 Response regulator receiver domain PACID_07060 PF00486 Transcriptional regulatory protein, C terminal PACID_07070 PF01384 PACID_07070 PACID_07090 PF00012 Hsp70 protein PACID_07100 PF01025 GrpE PACID_07110 PF00226 DnaJ domain PACID_07110 PF00684 DnaJ central domain PACID_07110 PF01556 DnaJ C terminal domain PACID_07120 PF13411 MerR HTH family regulatory protein PACID_07130 PF00107 Zinc-binding dehydrogenase PACID_07130 PF08240 Alcohol dehydrogenase GroES-like domain PACID_07140 PF03306 Alpha-acetolactate decarboxylase PACID_07150 PF02080 TrkA-C domain PACID_07150 PF06826 PACID_07150 PACID_07160 PF00324 Amino acid permease PACID_07170 PF00293 NUDIX domain PACID_07180 PF02687 PACID_07180 PACID_07180 PF12704 MacB-like periplasmic core domain PACID_07190 PF00005 ABC transporter PACID_07220 PF04892 PACID_07220 PACID_07230 PF00072 Response regulator receiver domain PACID_07230 PF00196 Bacterial regulatory proteins, luxR family PACID_07240 PF07730 Histidine kinase PACID_07270 PF01613 Flavin reductase like domain PACID_07280 PF00274 Fructose-bisphosphate aldolase class-I PACID_07290 PF00356 Bacterial regulatory proteins, lacI family PACID_07290 PF13377 Periplasmic binding protein-like domain PACID_07300 PF02065 Melibiase PACID_07300 PF16874 PACID_07300 PACID_07300 PF16875 PACID_07300 PACID_07310 PF13347 MFS/sugar transport protein PACID_07320 PF03332 Eukaryotic phosphomannomutase PACID_07330 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07340 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07350 PF13416 Bacterial extracellular solute-binding protein PACID_07360 PF00004 ATPase family associated with various cellular activities (AAA) PACID_07360 PF02861 Clp amino terminal domain PACID_07360 PF07724 AAA domain (Cdc48 subfamily) PACID_07360 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_07370 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07380 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07390 PF01547 Bacterial extracellular solute-binding protein PACID_07400 PF00294 pfkB family carbohydrate kinase PACID_07410 PF00455 PACID_07410 PACID_07410 PF08220 DeoR-like helix-turn-helix domain PACID_07420 PF02056 Family 4 glycosyl hydrolase PACID_07420 PF11975 Family 4 glycosyl hydrolase C-terminal domain PACID_07430 PF04480 Protein of unknown function (DUF559) PACID_07440 PF00011 Hsp20/alpha crystallin family PACID_07450 PF12698 ABC-2 family transporter protein PACID_07460 PF00005 ABC transporter PACID_07470 PF00440 Bacterial regulatory proteins, tetR family PACID_07480 PF05368 NmrA-like family PACID_07490 PF01402 Ribbon-helix-helix protein, copG family PACID_07510 PF01402 Ribbon-helix-helix protein, copG family PACID_07530 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_07530 PF04851 Type III restriction enzyme, res subunit PACID_07530 PF11867 PACID_07530 PACID_07550 PF02384 N-6 DNA Methylase PACID_07550 PF12161 HsdM N-terminal domain PACID_07580 PF11611 Domain of unknown function (DUF4352) PACID_07620 PF00005 ABC transporter PACID_07630 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PACID_07650 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PACID_07660 PF00392 Bacterial regulatory proteins, gntR family PACID_07670 PF00005 ABC transporter PACID_07690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PACID_07700 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07710 PF00005 ABC transporter PACID_07720 PF00528 Binding-protein-dependent transport system inner membrane component PACID_07730 PF00732 GMC oxidoreductase PACID_07730 PF05199 GMC oxidoreductase PACID_07740 PF00171 Aldehyde dehydrogenase family PACID_07750 PF00155 Aminotransferase class I and II PACID_07780 PF04203 Sortase family PACID_07790 PF04011 LemA family PACID_07800 PF01467 Cytidylyltransferase PACID_07810 PF13641 Glycosyltransferase like family 2 PACID_07820 PF13579 Glycosyl transferase 4-like domain PACID_07820 PF13692 Glycosyl transferases group 1 PACID_07830 PF13641 Glycosyltransferase like family 2 PACID_07840 PF13439 Glycosyltransferase Family 4 PACID_07840 PF13692 Glycosyl transferases group 1 PACID_07850 PF01066 CDP-alcohol phosphatidyltransferase PACID_07870 PF07602 PACID_07870 PACID_07870 PF13229 Right handed beta helix region PACID_07880 PF13440 PACID_07880 PACID_07890 PF02706 Chain length determinant protein PACID_07890 PF13614 AAA domain PACID_07910 PF00801 PKD domain PACID_07910 PF13385 Concanavalin A-like lectin/glucanases superfamily PACID_07930 PF09335 PACID_07930 PACID_07940 PF00588 SpoU rRNA Methylase family PACID_07960 PF01116 Fructose-bisphosphate aldolase class-II PACID_07970 PF00682 HMGL-like PACID_07970 PF02436 Conserved carboxylase domain PACID_07980 PF01039 Carboxyl transferase domain PACID_08000 PF00364 Biotin-requiring enzyme PACID_08010 PF00106 short chain dehydrogenase PACID_08020 PF00391 PEP-utilising enzyme, mobile domain PACID_08020 PF02896 PEP-utilising enzyme, TIM barrel domain PACID_08020 PF05524 PEP-utilising enzyme, N-terminal PACID_08030 PF00381 PTS HPr component phosphorylation site PACID_08040 PF00300 Histidine phosphatase superfamily (branch 1) PACID_08050 PF01895 PhoU domain PACID_08060 PF00512 His Kinase A (phospho-acceptor) domain PACID_08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_08070 PF00072 Response regulator receiver domain PACID_08070 PF00486 Transcriptional regulatory protein, C terminal PACID_08090 PF00665 Integrase core domain PACID_08100 PF02559 CarD-like/TRCF domain PACID_08110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_08130 PF03611 PACID_08130 PACID_08140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_08150 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus PACID_08150 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus PACID_08170 PF04198 Putative sugar-binding domain PACID_08180 PF03608 PACID_08180 PACID_08190 PF03612 PACID_08190 PACID_08190 PF07663 PACID_08190 PACID_08200 PF03829 PTS system glucitol/sorbitol-specific IIA component PACID_08210 PF06923 PACID_08210 PACID_08230 PF00107 Zinc-binding dehydrogenase PACID_08230 PF08240 Alcohol dehydrogenase GroES-like domain PACID_08240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_08240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_08250 PF04198 Putative sugar-binding domain PACID_08260 PF01116 Fructose-bisphosphate aldolase class-II PACID_08270 PF01894 Uncharacterised protein family UPF0047 PACID_08290 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase PACID_08300 PF02542 YgbB family PACID_08310 PF04228 PACID_08310 PACID_08320 PF09972 PACID_08320 PACID_08340 PF00464 Serine hydroxymethyltransferase PACID_08380 PF07690 Major Facilitator Superfamily PACID_08390 PF08241 Methyltransferase domain PACID_08400 PF00588 SpoU rRNA Methylase family PACID_08400 PF08032 RNA 2'-O ribose methyltransferase substrate binding PACID_08410 PF01406 tRNA synthetases class I (C) catalytic domain PACID_08410 PF09190 DALR domain PACID_08430 PF13224 PACID_08430 PACID_08440 PF01053 Cys/Met metabolism PLP-dependent enzyme PACID_08450 PF03780 PACID_08450 PACID_08470 PF03780 PACID_08470 PACID_08530 PF00005 ABC transporter PACID_08530 PF08402 TOBE domain PACID_08560 PF07690 Major Facilitator Superfamily PACID_08570 PF13302 Acetyltransferase (GNAT) domain PACID_08580 PF13419 Haloacid dehalogenase-like hydrolase PACID_08590 PF12706 Beta-lactamase superfamily domain PACID_08600 PF03313 PACID_08600 PACID_08600 PF03315 Serine dehydratase beta chain PACID_08610 PF00480 ROK family PACID_08610 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_08610 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_08610 PF09339 IclR helix-turn-helix domain PACID_08620 PF13416 Bacterial extracellular solute-binding protein PACID_08630 PF00528 Binding-protein-dependent transport system inner membrane component PACID_08640 PF00528 Binding-protein-dependent transport system inner membrane component PACID_08650 PF00107 Zinc-binding dehydrogenase PACID_08650 PF08240 Alcohol dehydrogenase GroES-like domain PACID_08660 PF00155 Aminotransferase class I and II PACID_08670 PF09335 PACID_08670 PACID_08680 PF01661 Macro domain PACID_08690 PF00005 ABC transporter PACID_08710 PF07730 Histidine kinase PACID_08720 PF00072 Response regulator receiver domain PACID_08720 PF00196 Bacterial regulatory proteins, luxR family PACID_08730 PF00809 Pterin binding enzyme PACID_08740 PF00300 Histidine phosphatase superfamily (branch 1) PACID_08760 PF00005 ABC transporter PACID_08770 PF07730 Histidine kinase PACID_08780 PF00072 Response regulator receiver domain PACID_08780 PF00196 Bacterial regulatory proteins, luxR family PACID_08790 PF03186 PACID_08790 PACID_08800 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PACID_08800 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_08810 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08820 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08830 PF01890 Cobalamin synthesis G C-terminus PACID_08830 PF11760 Cobalamin synthesis G N-terminal PACID_08840 PF01903 CbiX PACID_08840 PF13241 Putative NAD(P)-binding PACID_08860 PF02570 Precorrin-8X methylmutase PACID_08870 PF01891 Cobalt uptake substrate-specific transmembrane region PACID_08880 PF02553 PACID_08880 PACID_08890 PF02361 Cobalt transport protein PACID_08900 PF00005 ABC transporter PACID_08910 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PACID_08920 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP PACID_08930 PF00155 Aminotransferase class I and II PACID_08930 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain PACID_08930 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_08940 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_08950 PF02571 PACID_08950 PACID_08960 PF02277 Phosphoribosyltransferase PACID_08970 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase PACID_08980 PF02654 PACID_08980 PACID_09000 PF08241 Methyltransferase domain PACID_09020 PF02664 S-Ribosylhomocysteinase (LuxS) PACID_09040 PF01238 Phosphomannose isomerase type I PACID_09050 PF11662 PACID_09050 PACID_09060 PF00118 TCP-1/cpn60 chaperonin family PACID_09080 PF00691 OmpA family PACID_09100 PF02517 CAAX protease self-immunity PACID_09120 PF03932 CutC family PACID_09130 PF04851 Type III restriction enzyme, res subunit PACID_09130 PF13625 PACID_09130 PACID_09130 PF16203 PACID_09130 PACID_09140 PF13625 PACID_09140 PACID_09160 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PACID_09170 PF00313 'Cold-shock' DNA-binding domain PACID_09180 PF11228 PACID_09180 PACID_09190 PF10745 PACID_09190 PACID_09200 PF00860 Permease family PACID_09240 PF00266 Aminotransferase class-V PACID_09250 PF01979 Amidohydrolase family PACID_09260 PF01325 Iron dependent repressor, N-terminal DNA binding domain PACID_09260 PF02742 Iron dependent repressor, metal binding and dimerisation domain PACID_09270 PF08241 Methyltransferase domain PACID_09280 PF00085 Thioredoxin PACID_09290 PF00923 Transaldolase PACID_09300 PF00294 pfkB family carbohydrate kinase PACID_09320 PF04962 KduI/IolB family PACID_09330 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_09330 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_09330 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_09350 PF00356 Bacterial regulatory proteins, lacI family PACID_09350 PF13377 Periplasmic binding protein-like domain PACID_09360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_09360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_09370 PF00083 Sugar (and other) transporter PACID_09380 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_09380 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_09400 PF01704 UTP--glucose-1-phosphate uridylyltransferase PACID_09420 PF01741 Large-conductance mechanosensitive channel, MscL PACID_09430 PF08666 SAF domain PACID_09440 PF09723 PACID_09440 PACID_09450 PF01812 5-formyltetrahydrofolate cyclo-ligase family PACID_09460 PF03453 MoeA N-terminal region (domain I and II) PACID_09460 PF03454 MoeA C-terminal region (domain IV) PACID_09470 PF13302 Acetyltransferase (GNAT) domain PACID_09500 PF01872 RibD C-terminal domain PACID_09510 PF01965 DJ-1/PfpI family PACID_09520 PF12867 DinB superfamily PACID_09540 PF00155 Aminotransferase class I and II PACID_09550 PF00892 EamA-like transporter family PACID_09560 PF13302 Acetyltransferase (GNAT) domain PACID_09570 PF00176 SNF2 family N-terminal domain PACID_09570 PF00271 Helicase conserved C-terminal domain PACID_09570 PF08455 PACID_09570 PACID_09590 PF03537 Glycoside-hydrolase family GH114 PACID_09600 PF12840 Helix-turn-helix domain PACID_09610 PF08327 Activator of Hsp90 ATPase homolog 1-like protein PACID_09620 PF00890 FAD binding domain PACID_09630 PF00440 Bacterial regulatory proteins, tetR family PACID_09640 PF07920 Protein of unknown function (DUF1684) PACID_09650 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_09650 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_09660 PF00440 Bacterial regulatory proteins, tetR family PACID_09660 PF16914 PACID_09660 PACID_09670 PF13646 HEAT repeats PACID_09680 PF13411 MerR HTH family regulatory protein PACID_09700 PF01965 DJ-1/PfpI family PACID_09710 PF06736 PACID_09710 PACID_09720 PF00440 Bacterial regulatory proteins, tetR family PACID_09730 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PACID_09730 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PACID_09740 PF00072 Response regulator receiver domain PACID_09740 PF00196 Bacterial regulatory proteins, luxR family PACID_09750 PF07730 Histidine kinase PACID_09750 PF13796 PACID_09750 PACID_09760 PF07859 alpha/beta hydrolase fold PACID_09790 PF05532 CsbD-like PACID_09800 PF09818 Predicted ATPase of the ABC class PACID_09810 PF03746 LamB/YcsF family PACID_09820 PF02626 Allophanate hydrolase subunit 2 PACID_09820 PF02682 Allophanate hydrolase subunit 1 PACID_09830 PF00069 Protein kinase domain PACID_09840 PF00860 Permease family PACID_09850 PF13231 PACID_09850 PACID_09850 PF16192 PACID_09850 PACID_09860 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_09870 PF01026 TatD related DNase PACID_09880 PF00398 Ribosomal RNA adenine dimethylase PACID_09890 PF00288 GHMP kinases N terminal domain PACID_09890 PF08544 GHMP kinases C terminal PACID_09900 PF12802 MarR family PACID_09910 PF00440 Bacterial regulatory proteins, tetR family PACID_09930 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_09930 PF12804 MobA-like NTP transferase domain PACID_09940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase PACID_09940 PF14572 Phosphoribosyl synthetase-associated domain PACID_09950 PF01386 Ribosomal L25p family PACID_09950 PF14693 Ribosomal protein TL5, C-terminal domain PACID_09960 PF01195 Peptidyl-tRNA hydrolase PACID_09970 PF00270 DEAD/DEAH box helicase PACID_09970 PF00271 Helicase conserved C-terminal domain PACID_09970 PF02559 CarD-like/TRCF domain PACID_09970 PF03461 TRCF domain PACID_09990 PF03819 MazG nucleotide pyrophosphohydrolase domain PACID_10000 PF00113 Enolase, C-terminal TIM barrel domain PACID_10000 PF03952 Enolase, N-terminal domain PACID_10010 PF04977 Septum formation initiator PACID_10020 PF04417 PACID_10020 PACID_10030 PF02541 Ppx/GppA phosphatase family PACID_10050 PF04454 Encapsulating protein for peroxidase PACID_10060 PF04261 Dyp-type peroxidase family PACID_10070 PF13180 PDZ domain PACID_10070 PF13365 Trypsin-like peptidase domain PACID_10110 PF12811 PACID_10110 PACID_10120 PF00293 NUDIX domain PACID_10170 PF00707 Translation initiation factor IF-3, C-terminal domain PACID_10170 PF05198 Translation initiation factor IF-3, N-terminal domain PACID_10180 PF01632 Ribosomal protein L35 PACID_10190 PF00453 Ribosomal protein L20 PACID_10200 PF00588 SpoU rRNA Methylase family PACID_10200 PF08032 RNA 2'-O ribose methyltransferase substrate binding PACID_10210 PF10101 PACID_10210 PACID_10220 PF01409 tRNA synthetases class II core domain (F) PACID_10220 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain PACID_10230 PF01588 Putative tRNA binding domain PACID_10230 PF03147 Ferredoxin-fold anticodon binding domain PACID_10230 PF03483 B3/4 domain PACID_10230 PF03484 tRNA synthetase B5 domain PACID_10240 PF04055 Radical SAM superfamily PACID_10240 PF06968 Biotin and Thiamin Synthesis associated domain PACID_10250 PF00440 Bacterial regulatory proteins, tetR family PACID_10250 PF02909 Tetracyclin repressor, C-terminal all-alpha domain PACID_10260 PF01316 Arginine repressor, DNA binding domain PACID_10260 PF02863 Arginine repressor, C-terminal domain PACID_10270 PF00579 tRNA synthetases class I (W and Y) PACID_10320 PF00583 Acetyltransferase (GNAT) family PACID_10350 PF01625 Peptide methionine sulfoxide reductase PACID_10360 PF03167 Uracil DNA glycosylase superfamily PACID_10370 PF01594 PACID_10370 PACID_10390 PF01272 Transcription elongation factor, GreA/GreB, C-term PACID_10390 PF03449 Transcription elongation factor, N-terminal PACID_10400 PF14155 PACID_10400 PACID_10420 PF03190 Protein of unknown function, DUF255 PACID_10430 PF01255 Putative undecaprenyl diphosphate synthase PACID_10440 PF03006 PACID_10440 PACID_10450 PF02562 PhoH-like protein PACID_10450 PF13638 PIN domain PACID_10460 PF14030 PACID_10460 PACID_10470 PF02609 Exonuclease VII small subunit PACID_10480 PF02601 PACID_10480 PACID_10480 PF13742 PACID_10480 PACID_10490 PF02646 PACID_10490 PACID_10500 PF02127 Aminopeptidase I zinc metalloprotease (M18) PACID_10510 PF00005 ABC transporter PACID_10530 PF06983 3-demethylubiquinone-9 3-methyltransferase PACID_10540 PF01926 50S ribosome-binding GTPase PACID_10540 PF06071 Protein of unknown function (DUF933) PACID_10550 PF02384 N-6 DNA Methylase PACID_10550 PF12161 HsdM N-terminal domain PACID_10570 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_10570 PF04851 Type III restriction enzyme, res subunit PACID_10570 PF11867 PACID_10570 PACID_10590 PF00239 Resolvase, N terminal domain PACID_10590 PF07508 Recombinase PACID_10600 PF07275 Antirestriction protein (ArdA) PACID_10650 PF11523 Protein of unknown function (DUF3223) PACID_10670 PF12728 Helix-turn-helix domain PACID_10690 PF05015 Plasmid maintenance system killer protein PACID_10700 PF01381 Helix-turn-helix PACID_10710 PF00583 Acetyltransferase (GNAT) family PACID_10720 PF13701 PACID_10720 PACID_10730 PF13358 DDE superfamily endonuclease PACID_10730 PF13551 Winged helix-turn helix PACID_10730 PF13592 PACID_10730 PACID_10750 PF00005 ABC transporter PACID_10760 PF05015 Plasmid maintenance system killer protein PACID_10770 PF01381 Helix-turn-helix PACID_10790 PF00174 Oxidoreductase molybdopterin binding domain PACID_10790 PF01292 Prokaryotic cytochrome b561 PACID_10810 PF01909 Nucleotidyltransferase domain PACID_10820 PF01934 Protein of unknown function DUF86 PACID_10830 PF13508 Acetyltransferase (GNAT) domain PACID_10850 PF12688 Tetratrico peptide repeat PACID_10860 PF01850 PIN domain PACID_10870 PF00872 PACID_10870 PACID_10880 PF01872 RibD C-terminal domain PACID_10890 PF01872 RibD C-terminal domain PACID_10900 PF06445 GyrI-like small molecule binding domain PACID_10910 PF03747 ADP-ribosylglycohydrolase PACID_10920 PF13563 2'-5' RNA ligase superfamily PACID_10930 PF01636 Phosphotransferase enzyme family PACID_10940 PF00005 ABC transporter PACID_10940 PF00664 ABC transporter transmembrane region PACID_10950 PF00300 Histidine phosphatase superfamily (branch 1) PACID_10980 PF04542 Sigma-70 region 2 PACID_10980 PF08281 Sigma-70, region 4 PACID_10990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PACID_10990 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain PACID_11010 PF07730 Histidine kinase PACID_11030 PF00072 Response regulator receiver domain PACID_11030 PF00196 Bacterial regulatory proteins, luxR family PACID_11040 PF08240 Alcohol dehydrogenase GroES-like domain PACID_11040 PF13602 Zinc-binding dehydrogenase PACID_11050 PF00083 Sugar (and other) transporter PACID_11060 PF00083 Sugar (and other) transporter PACID_11070 PF05235 CHAD domain PACID_11090 PF13419 Haloacid dehalogenase-like hydrolase PACID_11110 PF13740 ACT domain PACID_11120 PF07995 Glucose / Sorbosone dehydrogenase PACID_11130 PF00248 Aldo/keto reductase family PACID_11140 PF08534 Redoxin PACID_11150 PF00324 Amino acid permease PACID_11160 PF00128 Alpha amylase, catalytic domain PACID_11170 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain PACID_11170 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain PACID_11180 PF12146 Putative lysophospholipase PACID_11200 PF01642 Methylmalonyl-CoA mutase PACID_11210 PF01642 Methylmalonyl-CoA mutase PACID_11210 PF02310 B12 binding domain PACID_11220 PF03308 ArgK protein PACID_11230 PF13275 S4 domain PACID_11260 PF00005 ABC transporter PACID_11270 PF00528 Binding-protein-dependent transport system inner membrane component PACID_11280 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_11290 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_11300 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_11320 PF03551 Transcriptional regulator PadR-like family PACID_11330 PF00950 PACID_11330 PACID_11340 PF00005 ABC transporter PACID_11350 PF01297 Periplasmic solute binding protein family PACID_11360 PF00857 Isochorismatase family PACID_11370 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin PACID_11380 PF00171 Aldehyde dehydrogenase family PACID_11380 PF01619 Proline dehydrogenase PACID_11390 PF00107 Zinc-binding dehydrogenase PACID_11390 PF08240 Alcohol dehydrogenase GroES-like domain PACID_11400 PF02733 Dak1 domain PACID_11400 PF02734 DAK2 domain PACID_11410 PF00156 Phosphoribosyl transferase domain PACID_11420 PF00455 PACID_11420 PACID_11420 PF08220 DeoR-like helix-turn-helix domain PACID_11430 PF02502 Ribose/Galactose Isomerase PACID_11450 PF13242 HAD-hyrolase-like PACID_11450 PF13344 Haloacid dehalogenase-like hydrolase PACID_11460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_11460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_11470 PF13685 Iron-containing alcohol dehydrogenase PACID_11480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_11480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_11490 PF00456 Transketolase, thiamine diphosphate binding domain PACID_11490 PF02779 Transketolase, pyrimidine binding domain PACID_11490 PF02780 Transketolase, C-terminal domain PACID_11540 PF12802 MarR family PACID_11550 PF05977 Transmembrane secretion effector PACID_11560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PACID_11560 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PACID_11560 PF12769 Domain of unknown function (DUF3814) PACID_11570 PF02233 NAD(P) transhydrogenase beta subunit PACID_11580 PF00144 Beta-lactamase PACID_11590 PF04294 PACID_11590 PACID_11590 PF12229 Putative peptidoglycan binding domain PACID_11600 PF00037 4Fe-4S binding domain PACID_11610 PF00155 Aminotransferase class I and II PACID_11640 PF14602 Hexapeptide repeat of succinyl-transferase PACID_11640 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle PACID_11640 PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal PACID_11650 PF01546 Peptidase family M20/M25/M40 PACID_11650 PF07687 Peptidase dimerisation domain PACID_11660 PF03641 Possible lysine decarboxylase PACID_11680 PF11314 PACID_11680 PACID_11690 PF00534 Glycosyl transferases group 1 PACID_11690 PF13439 Glycosyltransferase Family 4 PACID_11700 PF00483 Nucleotidyl transferase PACID_11710 PF07336 Protein of unknown function (DUF1470) PACID_11710 PF11706 CGNR zinc finger PACID_11720 PF07884 Vitamin K epoxide reductase family PACID_11730 PF01596 O-methyltransferase PACID_11740 PF00701 Dihydrodipicolinate synthetase family PACID_11750 PF02416 mttA/Hcf106 family PACID_11760 PF01883 Domain of unknown function DUF59 PACID_11760 PF10609 ParA/MinD ATPase like PACID_11770 PF06210 PACID_11770 PACID_11780 PF00571 CBS domain PACID_11780 PF03448 MgtE intracellular N domain PACID_11800 PF13649 Methyltransferase domain PACID_11810 PF02628 PACID_11810 PACID_11820 PF00557 Metallopeptidase family M24 PACID_11820 PF05195 Aminopeptidase P, N-terminal domain PACID_11840 PF02602 Uroporphyrinogen-III synthase HemD PACID_11850 PF00202 Aminotransferase class-III PACID_11860 PF00795 Carbon-nitrogen hydrolase PACID_11870 PF13520 Amino acid permease PACID_11880 PF02591 Putative zinc ribbon domain PACID_11900 PF01544 CorA-like Mg2+ transporter protein PACID_11910 PF00557 Metallopeptidase family M24 PACID_11920 PF10708 PACID_11920 PACID_11930 PF00120 Glutamine synthetase, catalytic domain PACID_11930 PF03951 Glutamine synthetase, beta-Grasp domain PACID_11950 PF03710 Glutamate-ammonia ligase adenylyltransferase PACID_11950 PF08335 GlnD PII-uridylyltransferase PACID_11960 PF06738 PACID_11960 PACID_11960 PF12821 PACID_11960 PACID_11970 PF01784 NIF3 (NGG1p interacting factor 3) PACID_11980 PF02698 DUF218 domain PACID_11990 PF01381 Helix-turn-helix PACID_12010 PF00120 Glutamine synthetase, catalytic domain PACID_12010 PF03951 Glutamine synthetase, beta-Grasp domain PACID_12030 PF06271 PACID_12030 PACID_12040 PF00534 Glycosyl transferases group 1 PACID_12040 PF13439 Glycosyltransferase Family 4 PACID_12050 PF09335 PACID_12050 PACID_12060 PF00571 CBS domain PACID_12070 PF00005 ABC transporter PACID_12080 PF13829 PACID_12080 PACID_12090 PF04055 Radical SAM superfamily PACID_12090 PF16881 PACID_12090 PACID_12100 PF00122 E1-E2 ATPase PACID_12100 PF00403 Heavy-metal-associated domain PACID_12100 PF00702 haloacid dehalogenase-like hydrolase PACID_12110 PF09678 PACID_12110 PACID_12120 PF03099 Biotin/lipoate A/B protein ligase family PACID_12130 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_12130 PF00364 Biotin-requiring enzyme PACID_12130 PF02817 e3 binding domain PACID_12160 PF11241 PACID_12160 PACID_12170 PF04012 PACID_12170 PACID_12190 PF02595 Glycerate kinase family PACID_12200 PF01521 Iron-sulphur cluster biosynthesis PACID_12210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain PACID_12210 PF02790 Cytochrome C oxidase subunit II, transmembrane domain PACID_12230 PF12270 PACID_12230 PACID_12240 PF00478 IMP dehydrogenase / GMP reductase domain PACID_12240 PF00571 CBS domain PACID_12250 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain PACID_12260 PF13631 Cytochrome b(N-terminal)/b6/petB PACID_12270 PF00355 Rieske [2Fe-2S] domain PACID_12280 PF00034 Cytochrome c PACID_12280 PF13442 Cytochrome C oxidase, cbb3-type, subunit III PACID_12290 PF00510 Cytochrome c oxidase subunit III PACID_12310 PF00591 Glycosyl transferase family, a/b domain PACID_12310 PF02885 Glycosyl transferase family, helical bundle domain PACID_12350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PACID_12360 PF01694 Rhomboid family PACID_12370 PF01037 AsnC family PACID_12380 PF00929 Exonuclease PACID_12390 PF00665 Integrase core domain PACID_12400 PF00877 NlpC/P60 family PACID_12410 PF00480 ROK family PACID_12420 PF01553 Acyltransferase PACID_12440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_12450 PF00072 Response regulator receiver domain PACID_12450 PF00196 Bacterial regulatory proteins, luxR family PACID_12460 PF01474 Class-II DAHP synthetase family PACID_12470 PF13483 Beta-lactamase superfamily domain PACID_12480 PF00892 EamA-like transporter family PACID_12490 PF00069 Protein kinase domain PACID_12510 PF02581 Thiamine monophosphate synthase/TENI PACID_12520 PF00348 Polyprenyl synthetase PACID_12530 PF02219 Methylenetetrahydrofolate reductase PACID_12540 PF13245 Part of AAA domain PACID_12540 PF13538 UvrD-like helicase C-terminal domain PACID_12570 PF13379 NMT1-like family PACID_12580 PF00528 Binding-protein-dependent transport system inner membrane component PACID_12590 PF00005 ABC transporter PACID_12600 PF00561 alpha/beta hydrolase fold PACID_12610 PF00011 Hsp20/alpha crystallin family PACID_12620 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PACID_12620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PACID_12630 PF02447 PACID_12630 PACID_12640 PF01202 Shikimate kinase PACID_12650 PF00392 Bacterial regulatory proteins, gntR family PACID_12650 PF07729 FCD domain PACID_12660 PF01061 PACID_12660 PACID_12670 PF01061 PACID_12670 PACID_12680 PF00005 ABC transporter PACID_12690 PF02347 Glycine cleavage system P-protein PACID_12700 PF01597 Glycine cleavage H-protein PACID_12710 PF01571 Aminomethyltransferase folate-binding domain PACID_12710 PF08669 Glycine cleavage T-protein C-terminal barrel domain PACID_12720 PF11239 PACID_12720 PACID_12730 PF01841 Transglutaminase-like superfamily PACID_12740 PF01882 PACID_12740 PACID_12750 PF07726 ATPase family associated with various cellular activities (AAA) PACID_12760 PF02381 MraZ protein PACID_12770 PF01795 MraW methylase family PACID_12790 PF00905 Penicillin binding protein transpeptidase domain PACID_12790 PF03717 Penicillin-binding Protein dimerisation domain PACID_12800 PF01225 Mur ligase family, catalytic domain PACID_12800 PF02875 Mur ligase family, glutamate ligase domain PACID_12800 PF08245 Mur ligase middle domain PACID_12810 PF01225 Mur ligase family, catalytic domain PACID_12810 PF02875 Mur ligase family, glutamate ligase domain PACID_12810 PF08245 Mur ligase middle domain PACID_12820 PF00953 Glycosyl transferase family 4 PACID_12820 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 PACID_12830 PF02875 Mur ligase family, glutamate ligase domain PACID_12830 PF08245 Mur ligase middle domain PACID_12840 PF01098 PACID_12840 PACID_12850 PF03033 Glycosyltransferase family 28 N-terminal domain PACID_12850 PF04101 Glycosyltransferase family 28 C-terminal domain PACID_12860 PF01225 Mur ligase family, catalytic domain PACID_12860 PF02875 Mur ligase family, glutamate ligase domain PACID_12860 PF08245 Mur ligase middle domain PACID_12870 PF03799 Cell division protein FtsQ PACID_12870 PF08478 POTRA domain, FtsQ-type PACID_12880 PF00091 Tubulin/FtsZ family, GTPase domain PACID_12880 PF12327 FtsZ family, C-terminal domain PACID_12890 PF02578 Multi-copper polyphenol oxidoreductase laccase PACID_12900 PF04472 Protein of unknown function (DUF552) PACID_12910 PF02325 PACID_12910 PACID_12930 PF01258 Prokaryotic dksA/traR C4-type zinc finger PACID_12940 PF01252 PACID_12940 PACID_12950 PF00849 RNA pseudouridylate synthase PACID_12950 PF01479 S4 domain PACID_12960 PF00224 Pyruvate kinase, barrel domain PACID_12960 PF02887 Pyruvate kinase, alpha/beta domain PACID_12980 PF00072 Response regulator receiver domain PACID_12980 PF03861 ANTAR domain PACID_12990 PF03061 Thioesterase superfamily PACID_13000 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_13010 PF00476 DNA polymerase family A PACID_13010 PF01367 5'-3' exonuclease, C-terminal SAM fold PACID_13010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain PACID_13020 PF01565 FAD binding domain PACID_13020 PF02754 PACID_13020 PACID_13020 PF02913 FAD linked oxidases, C-terminal domain PACID_13020 PF13534 4Fe-4S dicluster domain PACID_13030 PF04203 Sortase family PACID_13040 PF00575 S1 RNA binding domain PACID_13050 PF01121 Dephospho-CoA kinase PACID_13080 PF00271 Helicase conserved C-terminal domain PACID_13080 PF02151 UvrB/uvrC motif PACID_13080 PF04851 Type III restriction enzyme, res subunit PACID_13080 PF12344 Ultra-violet resistance protein B PACID_13090 PF03741 PACID_13090 PACID_13100 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain PACID_13110 PF00005 ABC transporter PACID_13130 PF00355 Rieske [2Fe-2S] domain PACID_13140 PF00300 Histidine phosphatase superfamily (branch 1) PACID_13150 PF01541 GIY-YIG catalytic domain PACID_13150 PF02151 UvrB/uvrC motif PACID_13150 PF08459 UvrC Helix-hairpin-helix N-terminal PACID_13150 PF14520 Helix-hairpin-helix domain PACID_13160 PF03668 PACID_13160 PACID_13170 PF01933 Uncharacterised protein family UPF0052 PACID_13180 PF02650 WhiA C-terminal HTH domain PACID_13180 PF10298 WhiA N-terminal LAGLIDADG-like domain PACID_13180 PF14527 WhiA LAGLIDADG-like domain PACID_13190 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain PACID_13190 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain PACID_13200 PF00162 Phosphoglycerate kinase PACID_13210 PF00121 Triosephosphate isomerase PACID_13220 PF03840 Preprotein translocase SecG subunit PACID_13230 PF13397 Domain of unknown function (DUF4109) PACID_13240 PF02875 Mur ligase family, glutamate ligase domain PACID_13240 PF08245 Mur ligase middle domain PACID_13250 PF14017 PACID_13250 PACID_13260 PF00334 Nucleoside diphosphate kinase PACID_13270 PF04055 Radical SAM superfamily PACID_13280 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_13290 PF10105 PACID_13290 PACID_13300 PF10150 Ribonuclease E/G family PACID_13310 PF00829 Ribosomal prokaryotic L21 protein PACID_13320 PF01016 Ribosomal L27 protein PACID_13340 PF01018 GTP1/OBG PACID_13340 PF01926 50S ribosome-binding GTPase PACID_13340 PF09269 Domain of unknown function (DUF1967) PACID_13350 PF00696 Amino acid kinase family PACID_13350 PF01472 PUA domain PACID_13360 PF00171 Aldehyde dehydrogenase family PACID_13380 PF01467 Cytidylyltransferase PACID_13390 PF02410 Oligomerisation domain PACID_13400 PF00300 Histidine phosphatase superfamily (branch 1) PACID_13470 PF01810 PACID_13470 PACID_13480 PF01037 AsnC family PACID_13480 PF13404 AsnC-type helix-turn-helix domain PACID_13530 PF04993 TfoX N-terminal domain PACID_13550 PF09966 Uncharacterized protein conserved in bacteria (DUF2200) PACID_13560 PF00005 ABC transporter PACID_13570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PACID_13590 PF02452 PemK-like protein PACID_13610 PF12833 Helix-turn-helix domain PACID_13660 PF00709 Adenylosuccinate synthetase PACID_13690 PF07929 Plasmid pRiA4b ORF-3-like protein PACID_13700 PF00440 Bacterial regulatory proteins, tetR family PACID_13700 PF16859 PACID_13700 PACID_13720 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_13740 PF01323 DSBA-like thioredoxin domain PACID_13760 PF13830 PACID_13760 PACID_13770 PF00133 tRNA synthetases class I (I, L, M and V) PACID_13770 PF08264 Anticodon-binding domain of tRNA PACID_13770 PF09334 tRNA synthetases class I (M) PACID_13770 PF13603 Leucyl-tRNA synthetase, Domain 2 PACID_13780 PF10531 SLBB domain PACID_13780 PF12836 Helix-hairpin-helix motif PACID_13790 PF00753 Metallo-beta-lactamase superfamily PACID_13790 PF03772 PACID_13790 PACID_13790 PF13567 PACID_13790 PACID_13800 PF04851 Type III restriction enzyme, res subunit PACID_13810 PF06144 DNA polymerase III, delta subunit PACID_13820 PF01649 Ribosomal protein S20 PACID_13830 PF00128 Alpha amylase, catalytic domain PACID_13840 PF00009 Elongation factor Tu GTP binding domain PACID_13840 PF00679 Elongation factor G C-terminus PACID_13840 PF03144 Elongation factor Tu domain 2 PACID_13840 PF06421 GTP-binding protein LepA C-terminus PACID_13870 PF12867 DinB superfamily PACID_13880 PF13378 Enolase C-terminal domain-like PACID_13890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_13900 PF00425 chorismate binding enzyme PACID_13910 PF00501 AMP-binding enzyme PACID_13910 PF13193 AMP-binding enzyme C-terminal domain PACID_13920 PF00378 Enoyl-CoA hydratase/isomerase family PACID_13930 PF01694 Rhomboid family PACID_13940 PF00501 AMP-binding enzyme PACID_13940 PF13193 AMP-binding enzyme C-terminal domain PACID_13940 PF16177 PACID_13940 PACID_13950 PF00501 AMP-binding enzyme PACID_13950 PF13193 AMP-binding enzyme C-terminal domain PACID_13950 PF16177 PACID_13950 PACID_13970 PF00005 ABC transporter PACID_13980 PF00440 Bacterial regulatory proteins, tetR family PACID_13990 PF07690 Major Facilitator Superfamily PACID_14000 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PACID_14010 PF00528 Binding-protein-dependent transport system inner membrane component PACID_14020 PF00528 Binding-protein-dependent transport system inner membrane component PACID_14030 PF01547 Bacterial extracellular solute-binding protein PACID_14040 PF04055 Radical SAM superfamily PACID_14050 PF11296 PACID_14050 PACID_14060 PF00459 Inositol monophosphatase family PACID_14080 PF00753 Metallo-beta-lactamase superfamily PACID_14090 PF01628 HrcA protein C terminal domain PACID_14090 PF08220 DeoR-like helix-turn-helix domain PACID_14100 PF00226 DnaJ domain PACID_14100 PF00684 DnaJ central domain PACID_14100 PF01556 DnaJ C terminal domain PACID_14110 PF04452 RNA methyltransferase PACID_14120 PF00107 Zinc-binding dehydrogenase PACID_14120 PF08240 Alcohol dehydrogenase GroES-like domain PACID_14130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_14130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit PACID_14130 PF02378 Phosphotransferase system, EIIC PACID_14140 PF07681 PACID_14140 PACID_14150 PF00270 DEAD/DEAH box helicase PACID_14150 PF00271 Helicase conserved C-terminal domain PACID_14170 PF00892 EamA-like transporter family PACID_14180 PF01702 Queuine tRNA-ribosyltransferase PACID_14190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_14190 PF07730 Histidine kinase PACID_14200 PF00072 Response regulator receiver domain PACID_14200 PF00196 Bacterial regulatory proteins, luxR family PACID_14210 PF00005 ABC transporter PACID_14210 PF13732 PACID_14210 PACID_14220 PF12698 ABC-2 family transporter protein PACID_14230 PF01850 PIN domain PACID_14240 PF04014 Antidote-toxin recognition MazE PACID_14250 PF02592 PACID_14250 PACID_14260 PF00561 alpha/beta hydrolase fold PACID_14270 PF12840 Helix-turn-helix domain PACID_14280 PF07690 Major Facilitator Superfamily PACID_14290 PF08241 Methyltransferase domain PACID_14300 PF15595 PACID_14300 PACID_14310 PF02562 PhoH-like protein PACID_14330 PF02130 Uncharacterized protein family UPF0054 PACID_14340 PF00571 CBS domain PACID_14340 PF01595 PACID_14340 PACID_14340 PF03471 Transporter associated domain PACID_14350 PF01926 50S ribosome-binding GTPase PACID_14350 PF07650 KH domain PACID_14360 PF07969 Amidohydrolase family PACID_14380 PF00682 HMGL-like PACID_14380 PF08502 LeuA allosteric (dimerisation) domain PACID_14390 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_14400 PF00528 Binding-protein-dependent transport system inner membrane component PACID_14410 PF00528 Binding-protein-dependent transport system inner membrane component PACID_14420 PF13230 Glutamine amidotransferases class-II PACID_14430 PF01255 Putative undecaprenyl diphosphate synthase PACID_14440 PF00583 Acetyltransferase (GNAT) family PACID_14450 PF00082 Subtilase family PACID_14460 PF02565 Recombination protein O C terminal PACID_14460 PF11967 Recombination protein O N terminal PACID_14470 PF08240 Alcohol dehydrogenase GroES-like domain PACID_14470 PF13602 Zinc-binding dehydrogenase PACID_14480 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family PACID_14530 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_14540 PF00239 Resolvase, N terminal domain PACID_14540 PF02796 Helix-turn-helix domain of resolvase PACID_14640 PF05713 PACID_14640 PACID_14650 PF03432 PACID_14650 PACID_14670 PF16259 PACID_14670 PACID_14680 PF12696 TraM recognition site of TraD and TraG PACID_14770 PF12728 Helix-turn-helix domain PACID_14780 PF01464 Transglycosylase SLT domain PACID_14780 PF05257 CHAP domain PACID_14800 PF13614 AAA domain PACID_14820 PF13730 PACID_14820 PACID_14840 PF12728 Helix-turn-helix domain PACID_14850 PF00665 Integrase core domain PACID_14870 PF08282 haloacid dehalogenase-like hydrolase PACID_14890 PF07726 ATPase family associated with various cellular activities (AAA) PACID_14900 PF01882 PACID_14900 PACID_14910 PF07584 PACID_14910 PACID_14910 PF13519 von Willebrand factor type A domain PACID_14920 PF13519 von Willebrand factor type A domain PACID_14930 PF01168 Alanine racemase, N-terminal domain PACID_14940 PF11343 PACID_14940 PACID_14950 PF00109 Beta-ketoacyl synthase, N-terminal domain PACID_14950 PF02801 Beta-ketoacyl synthase, C-terminal domain PACID_14960 PF00550 Phosphopantetheine attachment site PACID_14970 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal PACID_14970 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III PACID_14980 PF00698 Acyl transferase domain PACID_14990 PF02558 Ketopantoate reductase PanE/ApbA PACID_14990 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_15000 PF02579 Dinitrogenase iron-molybdenum cofactor PACID_15010 PF13556 PucR C-terminal helix-turn-helix domain PACID_15020 PF00456 Transketolase, thiamine diphosphate binding domain PACID_15030 PF11253 PACID_15030 PACID_15040 PF00248 Aldo/keto reductase family PACID_15050 PF09424 Yqey-like protein PACID_15060 PF00156 Phosphoribosyl transferase domain PACID_15070 PF01979 Amidohydrolase family PACID_15080 PF00117 Glutamine amidotransferase class-I PACID_15080 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain PACID_15090 PF02142 MGS-like domain PACID_15090 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_15090 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain PACID_15100 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B PACID_15110 PF01180 Dihydroorotate dehydrogenase PACID_15120 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family PACID_15130 PF00156 Phosphoribosyl transferase domain PACID_15140 PF03682 PACID_15140 PACID_15160 PF01230 HIT domain PACID_15180 PF03881 Fructosamine kinase PACID_15190 PF00919 Uncharacterized protein family UPF0004 PACID_15190 PF04055 Radical SAM superfamily PACID_15200 PF01066 CDP-alcohol phosphatidyltransferase PACID_15210 PF02464 Competence-damaged protein PACID_15220 PF13560 Helix-turn-helix domain PACID_15230 PF00455 PACID_15230 PACID_15230 PF08220 DeoR-like helix-turn-helix domain PACID_15240 PF11248 PACID_15240 PACID_15250 PF00154 recA bacterial DNA recombination protein PACID_15270 PF00013 KH domain PACID_15270 PF01966 HD domain PACID_15270 PF12072 PACID_15270 PACID_15280 PF01263 Aldose 1-epimerase PACID_15290 PF00919 Uncharacterized protein family UPF0004 PACID_15290 PF04055 Radical SAM superfamily PACID_15320 PF16945 PACID_15320 PACID_15390 PF10145 PACID_15390 PACID_15460 PF04586 PACID_15460 PACID_15470 PF04860 Phage portal protein PACID_15500 PF00847 AP2 domain PACID_15500 PF13392 HNH endonuclease PACID_15660 PF05866 Endodeoxyribonuclease RusA PACID_15780 PF12728 Helix-turn-helix domain PACID_15790 PF00872 PACID_15790 PACID_15820 PF02498 PACID_15820 PACID_15820 PF03374 PACID_15820 PACID_15830 PF01381 Helix-turn-helix PACID_15860 PF01381 Helix-turn-helix PACID_15920 PF00589 Phage integrase family PACID_15930 PF14013 PACID_15930 PACID_15940 PF01715 IPP transferase PACID_15950 PF01678 Diaminopimelate epimerase PACID_15960 PF01926 50S ribosome-binding GTPase PACID_15960 PF13167 PACID_15960 PACID_15960 PF16360 PACID_15960 PACID_15970 PF13307 Helicase C-terminal domain PACID_16000 PF03477 ATP cone domain PACID_16010 PF02867 Ribonucleotide reductase, barrel domain PACID_16010 PF08471 PACID_16010 PACID_16020 PF00692 dUTPase PACID_16040 PF00582 Universal stress protein family PACID_16050 PF08044 PACID_16050 PACID_16060 PF00270 DEAD/DEAH box helicase PACID_16060 PF00271 Helicase conserved C-terminal domain PACID_16060 PF04408 Helicase associated domain (HA2) PACID_16060 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold PACID_16060 PF11898 PACID_16060 PACID_16070 PF00140 Sigma-70 factor, region 1 PACID_16070 PF04539 Sigma-70 region 3 PACID_16070 PF04542 Sigma-70 region 2 PACID_16070 PF04545 Sigma-70, region 4 PACID_16080 PF00140 Sigma-70 factor, region 1 PACID_16080 PF04539 Sigma-70 region 3 PACID_16080 PF04542 Sigma-70 region 2 PACID_16080 PF04545 Sigma-70, region 4 PACID_16090 PF13673 Acetyltransferase (GNAT) domain PACID_16110 PF00204 DNA gyrase B PACID_16110 PF00986 DNA gyrase B subunit, carboxyl terminus PACID_16110 PF01751 Toprim domain PACID_16110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_16120 PF11700 PACID_16120 PACID_16140 PF00484 Carbonic anhydrase PACID_16150 PF00521 DNA gyrase/topoisomerase IV, subunit A PACID_16150 PF03989 DNA gyrase C-terminal domain, beta-propeller PACID_16160 PF09949 PACID_16160 PACID_16170 PF13701 PACID_16170 PACID_16180 PF03169 PACID_16180 PACID_16200 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase PACID_16210 PF11268 PACID_16210 PACID_16220 PF13834 PACID_16220 PACID_16230 PF14019 PACID_16230 PACID_16240 PF11292 PACID_16240 PACID_16250 PF00692 dUTPase PACID_16260 PF12502 PACID_16260 PACID_16280 PF02080 TrkA-C domain PACID_16280 PF02254 TrkA-N domain PACID_16290 PF02254 TrkA-N domain PACID_16300 PF13520 Amino acid permease PACID_16310 PF01938 TRAM domain PACID_16310 PF05958 tRNA (Uracil-5-)-methyltransferase PACID_16330 PF00330 Aconitase family (aconitate hydratase) PACID_16330 PF00694 Aconitase C-terminal domain PACID_16340 PF02779 Transketolase, pyrimidine binding domain PACID_16340 PF02780 Transketolase, C-terminal domain PACID_16340 PF13292 1-deoxy-D-xylulose-5-phosphate synthase PACID_16350 PF00570 HRDC domain PACID_16350 PF01612 3'-5' exonuclease PACID_16360 PF11452 PACID_16360 PACID_16370 PF01641 SelR domain PACID_16380 PF03976 Polyphosphate kinase 2 (PPK2) PACID_16440 PF01522 Polysaccharide deacetylase PACID_16460 PF13632 Glycosyl transferase family group 2 PACID_16510 PF00107 Zinc-binding dehydrogenase PACID_16510 PF08240 Alcohol dehydrogenase GroES-like domain PACID_16520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_16520 PF03129 Anticodon binding domain PACID_16520 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PACID_16530 PF01230 HIT domain PACID_16540 PF01066 CDP-alcohol phosphatidyltransferase PACID_16550 PF03279 PACID_16550 PACID_16560 PF13439 Glycosyltransferase Family 4 PACID_16560 PF13692 Glycosyl transferases group 1 PACID_16570 PF01066 CDP-alcohol phosphatidyltransferase PACID_16580 PF05949 Bacterial protein of unknown function (DUF881) PACID_16590 PF06947 PACID_16590 PACID_16600 PF05949 Bacterial protein of unknown function (DUF881) PACID_16610 PF01597 Glycine cleavage H-protein PACID_16620 PF00498 FHA domain PACID_16630 PF00376 MerR family regulatory protein PACID_16640 PF02577 Bifunctional nuclease PACID_16650 PF13411 MerR HTH family regulatory protein PACID_16660 PF03631 PACID_16660 PACID_16670 PF00365 Phosphofructokinase PACID_16690 PF01300 Telomere recombination PACID_16700 PF01048 Phosphorylase superfamily PACID_16710 PF00781 Diacylglycerol kinase catalytic domain PACID_16730 PF01205 Uncharacterized protein family UPF0029 PACID_16750 PF00753 Metallo-beta-lactamase superfamily PACID_16750 PF07521 RNA-metabolising metallo-beta-lactamase PACID_16750 PF10996 Beta-Casp domain PACID_16760 PF00012 Hsp70 protein PACID_16770 PF09754 PAC2 family PACID_16780 PF03167 Uracil DNA glycosylase superfamily PACID_16790 PF00472 RF-1 domain PACID_16800 PF00535 Glycosyl transferase family 2 PACID_16810 PF13437 HlyD family secretion protein PACID_16810 PF13533 Biotin-lipoyl like PACID_16820 PF03639 Glycosyl hydrolase family 81 PACID_16830 PF13520 Amino acid permease PACID_16860 PF04328 PACID_16860 PACID_16880 PF02554 PACID_16880 PACID_16880 PF13722 PACID_16880 PACID_16890 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_16890 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_16910 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PACID_16910 PF01381 Helix-turn-helix PACID_16920 PF08543 Phosphomethylpyrimidine kinase PACID_16940 PF13397 Domain of unknown function (DUF4109) PACID_16950 PF00535 Glycosyl transferase family 2 PACID_16960 PF00795 Carbon-nitrogen hydrolase PACID_16970 PF01037 AsnC family PACID_16970 PF13404 AsnC-type helix-turn-helix domain PACID_16980 PF07021 Methionine biosynthesis protein MetW PACID_16990 PF00561 alpha/beta hydrolase fold PACID_17000 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain PACID_17010 PF00248 Aldo/keto reductase family PACID_17020 PF08282 haloacid dehalogenase-like hydrolase PACID_17060 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PACID_17070 PF00665 Integrase core domain PACID_17080 PF12833 Helix-turn-helix domain PACID_17100 PF13560 Helix-turn-helix domain PACID_17110 PF07804 HipA-like C-terminal domain PACID_17110 PF13657 HipA N-terminal domain PACID_17120 PF01258 Prokaryotic dksA/traR C4-type zinc finger PACID_17130 PF02558 Ketopantoate reductase PanE/ApbA PACID_17130 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_17170 PF01212 Beta-eliminating lyase PACID_17180 PF11139 PACID_17180 PACID_17190 PF00440 Bacterial regulatory proteins, tetR family PACID_17190 PF13977 Bacterial transcriptional repressor PACID_17200 PF00583 Acetyltransferase (GNAT) family PACID_17210 PF12802 MarR family PACID_17230 PF01565 FAD binding domain PACID_17240 PF00440 Bacterial regulatory proteins, tetR family PACID_17250 PF00202 Aminotransferase class-III PACID_17280 PF01872 RibD C-terminal domain PACID_17290 PF00392 Bacterial regulatory proteins, gntR family PACID_17310 PF00149 Calcineurin-like phosphoesterase PACID_17310 PF13671 AAA domain PACID_17310 PF16536 PACID_17310 PACID_17310 PF16542 PACID_17310 PACID_17320 PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 PACID_17320 PF13489 Methyltransferase domain PACID_17370 PF01863 Protein of unknown function DUF45 PACID_17380 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) PACID_17380 PF04851 Type III restriction enzyme, res subunit PACID_17390 PF01610 PACID_17390 PACID_17400 PF00872 PACID_17400 PACID_17420 PF02384 N-6 DNA Methylase PACID_17420 PF12161 HsdM N-terminal domain PACID_17440 PF00293 NUDIX domain PACID_17450 PF02566 OsmC-like protein PACID_17470 PF01926 50S ribosome-binding GTPase PACID_17470 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal PACID_17480 PF02224 Cytidylate kinase PACID_17490 PF02153 Prephenate dehydrogenase PACID_17500 PF00227 Proteasome subunit PACID_17510 PF00227 Proteasome subunit PACID_17520 PF11255 PACID_17520 PACID_17530 PF08704 tRNA methyltransferase complex GCD14 subunit PACID_17530 PF13419 Haloacid dehalogenase-like hydrolase PACID_17530 PF14801 tRNA methyltransferase complex GCD14 subunit N-term PACID_17540 PF00809 Pterin binding enzyme PACID_17540 PF02310 B12 binding domain PACID_17540 PF02574 Homocysteine S-methyltransferase PACID_17540 PF02607 B12 binding domain PACID_17540 PF02965 Vitamin B12 dependent methionine synthase, activation domain PACID_17550 PF09754 PAC2 family PACID_17560 PF00834 Ribulose-phosphate 3 epimerase family PACID_17570 PF01029 NusB family PACID_17570 PF01189 NOL1/NOP2/sun family PACID_17580 PF00551 Formyl transferase PACID_17580 PF02911 Formyl transferase, C-terminal domain PACID_17610 PF02452 PemK-like protein PACID_17620 PF01850 PIN domain PACID_17630 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PACID_17640 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PACID_17640 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_17650 PF00270 DEAD/DEAH box helicase PACID_17650 PF00271 Helicase conserved C-terminal domain PACID_17650 PF08494 PACID_17650 PACID_17660 PF00438 S-adenosylmethionine synthetase, N-terminal domain PACID_17660 PF02772 S-adenosylmethionine synthetase, central domain PACID_17660 PF02773 S-adenosylmethionine synthetase, C-terminal domain PACID_17670 PF02441 Flavoprotein PACID_17670 PF04127 DNA / pantothenate metabolism flavoprotein PACID_17680 PF01192 RNA polymerase Rpb6 PACID_17690 PF00625 Guanylate kinase PACID_17710 PF01029 NusB family PACID_17720 PF01132 Elongation factor P (EF-P) OB domain PACID_17720 PF08207 Elongation factor P (EF-P) KOW-like domain PACID_17720 PF09285 Elongation factor P, C-terminal PACID_17730 PF00805 Pentapeptide repeats (8 copies) PACID_17730 PF13599 Pentapeptide repeats (9 copies) PACID_17740 PF01761 3-dehydroquinate synthase PACID_17750 PF01202 Shikimate kinase PACID_17760 PF01264 Chorismate synthase PACID_17770 PF08501 Shikimate dehydrogenase substrate binding domain PACID_17780 PF02618 YceG-like family PACID_17790 PF03652 Uncharacterised protein family (UPF0081) PACID_17800 PF01411 tRNA synthetases class II (A) PACID_17800 PF02272 DHHA1 domain PACID_17800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain PACID_17820 PF06103 PACID_17820 PACID_17840 PF05496 Holliday junction DNA helicase ruvB N-terminus PACID_17840 PF12002 MgsA AAA+ ATPase C terminal PACID_17840 PF16193 PACID_17840 PACID_17850 PF13350 Tyrosine phosphatase family PACID_17860 PF06262 Possibl zinc metallo-peptidase PACID_17870 PF00152 tRNA synthetases class II (D, K and N) PACID_17870 PF01336 OB-fold nucleic acid binding domain PACID_17870 PF02938 GAD domain PACID_17880 PF12697 Alpha/beta hydrolase family PACID_17900 PF00440 Bacterial regulatory proteins, tetR family PACID_17910 PF01869 BadF/BadG/BcrA/BcrD ATPase family PACID_17910 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component PACID_17910 PF09989 PACID_17910 PACID_17920 PF03129 Anticodon binding domain PACID_17920 PF13393 Histidyl-tRNA synthetase PACID_17930 PF00753 Metallo-beta-lactamase superfamily PACID_17940 PF03993 PACID_17940 PACID_17950 PF00291 Pyridoxal-phosphate dependent enzyme PACID_17950 PF14821 Threonine synthase N terminus PACID_17960 PF02824 TGS domain PACID_17960 PF04607 Region found in RelA / SpoT proteins PACID_17960 PF13291 ACT domain PACID_17960 PF13328 HD domain PACID_17970 PF02254 TrkA-N domain PACID_17970 PF07885 Ion channel PACID_17980 PF00156 Phosphoribosyl transferase domain PACID_17990 PF02355 Protein export membrane protein PACID_17990 PF07549 SecD/SecF GG Motif PACID_18000 PF02355 Protein export membrane protein PACID_18000 PF07549 SecD/SecF GG Motif PACID_18010 PF02699 Preprotein translocase subunit PACID_18020 PF05491 Holliday junction DNA helicase ruvB C-terminus PACID_18020 PF05496 Holliday junction DNA helicase ruvB N-terminus PACID_18030 PF01330 RuvA N terminal domain PACID_18030 PF07499 RuvA, C-terminal domain PACID_18030 PF14520 Helix-hairpin-helix domain PACID_18040 PF02075 Crossover junction endodeoxyribonuclease RuvC PACID_18050 PF01709 Transcriptional regulator PACID_18060 PF00977 Histidine biosynthesis protein PACID_18070 PF00117 Glutamine amidotransferase class-I PACID_18080 PF00475 Imidazoleglycerol-phosphate dehydratase PACID_18090 PF00155 Aminotransferase class I and II PACID_18100 PF00815 Histidinol dehydrogenase PACID_18120 PF01336 OB-fold nucleic acid binding domain PACID_18120 PF02811 PHP domain PACID_18120 PF07733 Bacterial DNA polymerase III alpha subunit PACID_18120 PF14579 Helix-hairpin-helix motif PACID_18130 PF03729 PACID_18130 PACID_18150 PF13416 Bacterial extracellular solute-binding protein PACID_18160 PF00528 Binding-protein-dependent transport system inner membrane component PACID_18170 PF00528 Binding-protein-dependent transport system inner membrane component PACID_18180 PF00232 Glycosyl hydrolase family 1 PACID_18190 PF00356 Bacterial regulatory proteins, lacI family PACID_18190 PF13377 Periplasmic binding protein-like domain PACID_18200 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_18200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster PACID_18210 PF00310 Glutamine amidotransferases class-II PACID_18210 PF01493 GXGXG motif PACID_18210 PF01645 Conserved region in glutamate synthase PACID_18210 PF04898 Glutamate synthase central domain PACID_18220 PF01790 PACID_18220 PACID_18230 PF00290 Tryptophan synthase alpha chain PACID_18240 PF00291 Pyridoxal-phosphate dependent enzyme PACID_18250 PF00218 Indole-3-glycerol phosphate synthase PACID_18270 PF09534 PACID_18270 PACID_18280 PF00425 chorismate binding enzyme PACID_18280 PF04715 Anthranilate synthase component I, N terminal region PACID_18290 PF01502 Phosphoribosyl-AMP cyclohydrolase PACID_18300 PF01844 HNH endonuclease PACID_18320 PF01475 Ferric uptake regulator family PACID_18330 PF03992 Antibiotic biosynthesis monooxygenase PACID_18340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_18340 PF03129 Anticodon binding domain PACID_18350 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain PACID_18350 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain PACID_18360 PF00890 FAD binding domain PACID_18360 PF02910 Fumarate reductase flavoprotein C-term PACID_18370 PF02445 Quinolinate synthetase A protein PACID_18390 PF00282 Pyridoxal-dependent decarboxylase conserved domain PACID_18410 PF00890 FAD binding domain PACID_18410 PF02910 Fumarate reductase flavoprotein C-term PACID_18420 PF13085 2Fe-2S iron-sulfur cluster binding domain PACID_18420 PF13183 4Fe-4S dicluster domain PACID_18430 PF01844 HNH endonuclease PACID_18430 PF02720 PACID_18430 PACID_18450 PF02358 Trehalose-phosphatase PACID_18470 PF01207 Dihydrouridine synthase (Dus) PACID_18500 PF01966 HD domain PACID_18500 PF13286 Phosphohydrolase-associated domain PACID_18510 PF01807 CHC2 zinc finger PACID_18510 PF08275 DNA primase catalytic core, N-terminal domain PACID_18510 PF08278 DNA primase DnaG DnaB-binding PACID_18510 PF10410 DnaB-helicase binding domain of primase PACID_18510 PF13662 Toprim domain PACID_18520 PF04542 Sigma-70 region 2 PACID_18520 PF04545 Sigma-70, region 4 PACID_18550 PF00005 ABC transporter PACID_18560 PF00982 Glycosyltransferase family 20 PACID_18570 PF02358 Trehalose-phosphatase PACID_18580 PF00291 Pyridoxal-phosphate dependent enzyme PACID_18600 PF00392 Bacterial regulatory proteins, gntR family PACID_18610 PF01680 SOR/SNZ family PACID_18620 PF01174 SNO glutamine amidotransferase family PACID_18630 PF01810 PACID_18630 PACID_18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_18640 PF03466 LysR substrate binding domain PACID_18660 PF00069 Protein kinase domain PACID_18670 PF00440 Bacterial regulatory proteins, tetR family PACID_18680 PF07690 Major Facilitator Superfamily PACID_18690 PF00999 Sodium/hydrogen exchanger family PACID_18700 PF13302 Acetyltransferase (GNAT) domain PACID_18710 PF00589 Phage integrase family PACID_18740 PF13614 AAA domain PACID_18800 PF01402 Ribbon-helix-helix protein, copG family PACID_18830 PF00899 ThiF family PACID_18840 PF13676 TIR domain PACID_18840 PF14464 Prokaryotic homologs of the JAB domain PACID_18850 PF00239 Resolvase, N terminal domain PACID_18850 PF02796 Helix-turn-helix domain of resolvase PACID_18860 PF03596 PACID_18860 PACID_18870 PF01022 Bacterial regulatory protein, arsR family PACID_18880 PF00239 Resolvase, N terminal domain PACID_18880 PF13518 Helix-turn-helix domain PACID_18890 PF00665 Integrase core domain PACID_18890 PF09299 Mu transposase, C-terminal PACID_18900 PF13401 AAA domain PACID_18980 PF02637 GatB domain PACID_18980 PF02934 GatB/GatE catalytic domain PACID_18990 PF01425 Amidase PACID_19000 PF02686 Glu-tRNAGln amidotransferase C subunit PACID_19030 PF09084 NMT1/THI5 like PACID_19040 PF00528 Binding-protein-dependent transport system inner membrane component PACID_19050 PF00005 ABC transporter PACID_19070 PF01717 Cobalamin-independent synthase, Catalytic domain PACID_19080 PF03054 tRNA methyl transferase PACID_19090 PF00266 Aminotransferase class-V PACID_19100 PF00128 Alpha amylase, catalytic domain PACID_19100 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_19130 PF00343 Carbohydrate phosphorylase PACID_19130 PF11897 PACID_19130 PACID_19140 PF11896 Domain of unknown function (DUF3416) PACID_19150 PF01636 Phosphotransferase enzyme family PACID_19160 PF00128 Alpha amylase, catalytic domain PACID_19160 PF02806 Alpha amylase, C-terminal all-beta domain PACID_19160 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_19180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 PACID_19180 PF00367 phosphotransferase system, EIIB PACID_19180 PF02378 Phosphotransferase system, EIIC PACID_19190 PF03632 Glycosyl hydrolase family 65 central catalytic domain PACID_19190 PF03633 Glycosyl hydrolase family 65, C-terminal domain PACID_19190 PF03636 Glycosyl hydrolase family 65, N-terminal domain PACID_19200 PF13419 Haloacid dehalogenase-like hydrolase PACID_19210 PF00085 Thioredoxin PACID_19210 PF14561 Tetratricopeptide repeat PACID_19220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_19220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_19220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_19220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_19240 PF03703 PACID_19240 PACID_19260 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PACID_19270 PF05103 DivIVA protein PACID_19280 PF01939 Protein of unknown function DUF91 PACID_19300 PF00561 alpha/beta hydrolase fold PACID_19310 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD PACID_19320 PF01923 Cobalamin adenosyltransferase PACID_19330 PF10739 PACID_19330 PACID_19340 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain PACID_19350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_19350 PF02874 ATP synthase alpha/beta family, beta-barrel domain PACID_19360 PF00231 ATP synthase PACID_19370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_19370 PF00306 ATP synthase alpha/beta chain, C terminal domain PACID_19370 PF02874 ATP synthase alpha/beta family, beta-barrel domain PACID_19380 PF00213 ATP synthase delta (OSCP) subunit PACID_19390 PF00430 ATP synthase B/B' CF(0) PACID_19400 PF00137 ATP synthase subunit C PACID_19410 PF00119 ATP synthase A chain PACID_19440 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_19460 PF00733 Asparagine synthase PACID_19460 PF13537 Glutamine amidotransferase domain PACID_19470 PF02540 NAD synthase PACID_19490 PF00501 AMP-binding enzyme PACID_19490 PF13193 AMP-binding enzyme C-terminal domain PACID_19500 PF02585 GlcNAc-PI de-N-acetylase PACID_19510 PF00534 Glycosyl transferases group 1 PACID_19510 PF13439 Glycosyltransferase Family 4 PACID_19520 PF00733 Asparagine synthase PACID_19520 PF13537 Glutamine amidotransferase domain PACID_19530 PF13692 Glycosyl transferases group 1 PACID_19540 PF13579 Glycosyl transferase 4-like domain PACID_19540 PF13692 Glycosyl transferases group 1 PACID_19550 PF04932 PACID_19550 PACID_19590 PF00535 Glycosyl transferase family 2 PACID_19590 PF11316 PACID_19590 PACID_19600 PF13313 PACID_19600 PACID_19610 PF13440 PACID_19610 PACID_19610 PF14667 Polysaccharide biosynthesis C-terminal domain PACID_19630 PF00953 Glycosyl transferase family 4 PACID_19640 PF01300 Telomere recombination PACID_19650 PF05175 Methyltransferase small domain PACID_19660 PF00472 RF-1 domain PACID_19660 PF03462 PCRF domain PACID_19670 PF01197 Ribosomal protein L31 PACID_19680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain PACID_19680 PF07497 Rho termination factor, RNA-binding domain PACID_19680 PF07498 Rho termination factor, N-terminal domain PACID_19690 PF00288 GHMP kinases N terminal domain PACID_19690 PF08544 GHMP kinases C terminal PACID_19700 PF00742 Homoserine dehydrogenase PACID_19700 PF01842 ACT domain PACID_19700 PF03447 Homoserine dehydrogenase, NAD binding domain PACID_19720 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain PACID_19720 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain PACID_19740 PF03641 Possible lysine decarboxylase PACID_19760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_19760 PF00676 Dehydrogenase E1 component PACID_19760 PF02779 Transketolase, pyrimidine binding domain PACID_19760 PF16078 PACID_19760 PACID_19760 PF16870 PACID_19760 PACID_19790 PF02467 PACID_19790 PACID_19800 PF07568 PACID_19800 PACID_19800 PF12282 Signal transduction histidine kinase PACID_19820 PF13490 Putative zinc-finger PACID_19830 PF04542 Sigma-70 region 2 PACID_19830 PF08281 Sigma-70, region 4 PACID_19840 PF07681 PACID_19840 PACID_19850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) PACID_19860 PF03193 Protein of unknown function, DUF258 PACID_19870 PF00450 Serine carboxypeptidase PACID_19880 PF00459 Inositol monophosphatase family PACID_19890 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_19890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_19910 PF00528 Binding-protein-dependent transport system inner membrane component PACID_19920 PF00528 Binding-protein-dependent transport system inner membrane component PACID_19930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_19940 PF13398 Peptidase M50B-like PACID_19970 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_19970 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_19970 PF14310 Fibronectin type III-like domain PACID_19980 PF00582 Universal stress protein family PACID_19980 PF03699 PACID_19980 PACID_20000 PF05362 Lon protease (S16) C-terminal proteolytic domain PACID_20000 PF13180 PDZ domain PACID_20010 PF10103 Uncharacterised conserved protein (DUF2342) PACID_20020 PF01863 Protein of unknown function DUF45 PACID_20040 PF00570 HRDC domain PACID_20040 PF13245 Part of AAA domain PACID_20040 PF13361 UvrD-like helicase C-terminal domain PACID_20050 PF04257 Exodeoxyribonuclease V, gamma subunit PACID_20060 PF00580 UvrD/REP helicase N-terminal domain PACID_20060 PF13361 UvrD-like helicase C-terminal domain PACID_20070 PF13538 UvrD-like helicase C-terminal domain PACID_20070 PF13604 AAA domain PACID_20080 PF00580 UvrD/REP helicase N-terminal domain PACID_20080 PF12705 PD-(D/E)XK nuclease superfamily PACID_20080 PF13361 UvrD-like helicase C-terminal domain PACID_20090 PF00580 UvrD/REP helicase N-terminal domain PACID_20090 PF12705 PD-(D/E)XK nuclease superfamily PACID_20090 PF13361 UvrD-like helicase C-terminal domain PACID_20100 PF00313 'Cold-shock' DNA-binding domain PACID_20110 PF13672 Protein phosphatase 2C PACID_20120 PF11305 PACID_20120 PACID_20140 PF00270 DEAD/DEAH box helicase PACID_20140 PF00271 Helicase conserved C-terminal domain PACID_20150 PF00579 tRNA synthetases class I (W and Y) PACID_20160 PF06114 Domain of unknown function (DUF955) PACID_20170 PF02811 PHP domain PACID_20180 PF10698 PACID_20180 PACID_20210 PF01043 SecA preprotein cross-linking domain PACID_20210 PF02810 SEC-C motif PACID_20210 PF07516 SecA Wing and Scaffold domain PACID_20210 PF07517 SecA DEAD-like domain PACID_20220 PF06224 PACID_20220 PACID_20230 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein PACID_20230 PF16321 PACID_20230 PACID_20260 PF00512 His Kinase A (phospho-acceptor) domain PACID_20260 PF00672 HAMP domain PACID_20260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_20270 PF00072 Response regulator receiver domain PACID_20270 PF00486 Transcriptional regulatory protein, C terminal PACID_20280 PF02622 Uncharacterized ACR, COG1678 PACID_20290 PF08044 PACID_20290 PACID_20300 PF00206 Lyase PACID_20300 PF14698 Argininosuccinate lyase C-terminal PACID_20310 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PACID_20310 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PACID_20320 PF00202 Aminotransferase class-III PACID_20330 PF00696 Amino acid kinase family PACID_20340 PF01960 ArgJ family PACID_20350 PF01118 Semialdehyde dehydrogenase, NAD binding domain PACID_20350 PF02774 Semialdehyde dehydrogenase, dimerisation domain PACID_20360 PF01668 SmpB protein PACID_20370 PF02687 PACID_20370 PACID_20380 PF00005 ABC transporter PACID_20390 PF00472 RF-1 domain PACID_20390 PF03462 PCRF domain PACID_20410 PF05656 PACID_20410 PACID_20420 PF05656 PACID_20420 PACID_20430 PF05656 PACID_20430 PACID_20440 PF01580 FtsK/SpoIIIE family PACID_20440 PF09397 Ftsk gamma domain PACID_20440 PF13491 PACID_20440 PACID_20450 PF00586 AIR synthase related protein, N-terminal domain PACID_20480 PF01820 D-ala D-ala ligase N-terminus PACID_20480 PF07478 D-ala D-ala ligase C-terminus PACID_20490 PF01553 Acyltransferase PACID_20500 PF00694 Aconitase C-terminal domain PACID_20510 PF00330 Aconitase family (aconitate hydratase) PACID_20520 PF01614 Bacterial transcriptional regulator PACID_20520 PF09339 IclR helix-turn-helix domain PACID_20550 PF02517 CAAX protease self-immunity PACID_20560 PF01557 Fumarylacetoacetate (FAA) hydrolase family PACID_20560 PF10370 Domain of unknown function (DUF2437) PACID_20570 PF00591 Glycosyl transferase family, a/b domain PACID_20570 PF02885 Glycosyl transferase family, helical bundle domain PACID_20570 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain PACID_20580 PF00682 HMGL-like PACID_20580 PF08502 LeuA allosteric (dimerisation) domain PACID_20590 PF01063 Aminotransferase class IV PACID_20600 PF00180 Isocitrate/isopropylmalate dehydrogenase PACID_20610 PF01145 SPFH domain / Band 7 family PACID_20610 PF15975 PACID_20610 PACID_20620 PF01957 NfeD-like C-terminal, partner-binding PACID_20640 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain PACID_20640 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain PACID_20650 PF10369 Small subunit of acetolactate synthase PACID_20650 PF13710 ACT domain PACID_20670 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_20670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_20670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_20680 PF01230 HIT domain PACID_20690 PF00977 Histidine biosynthesis protein PACID_20700 PF00270 DEAD/DEAH box helicase PACID_20700 PF00271 Helicase conserved C-terminal domain PACID_20700 PF08148 DSHCT (NUC185) domain PACID_20710 PF00781 Diacylglycerol kinase catalytic domain PACID_20720 PF00902 Sec-independent protein translocase protein (TatC) PACID_20730 PF02416 mttA/Hcf106 family PACID_20750 PF13280 PACID_20750 PACID_20760 PF13280 PACID_20760 PACID_20770 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_20780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PACID_20790 PF00849 RNA pseudouridylate synthase PACID_20790 PF01479 S4 domain PACID_20810 PF13614 AAA domain PACID_20820 PF00589 Phage integrase family PACID_20820 PF02899 Phage integrase, N-terminal SAM-like domain PACID_20830 PF00293 NUDIX domain PACID_20840 PF00117 Glutamine amidotransferase class-I PACID_20840 PF06418 CTP synthase N-terminus PACID_20850 PF02463 RecF/RecN/SMC N terminal domain PACID_20860 PF01513 ATP-NAD kinase PACID_20870 PF01479 S4 domain PACID_20870 PF01728 FtsJ-like methyltransferase PACID_20880 PF02361 Cobalt transport protein PACID_20890 PF00005 ABC transporter PACID_20900 PF02632 BioY family PACID_20910 PF13242 HAD-hyrolase-like PACID_20910 PF13344 Haloacid dehalogenase-like hydrolase PACID_20960 PF07179 PACID_20960 PACID_20980 PF01634 ATP phosphoribosyltransferase PACID_20980 PF08029 HisG, C-terminal domain PACID_20990 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase PACID_21000 PF04973 PACID_21000 PACID_21010 PF11290 PACID_21010 PACID_21020 PF00248 Aldo/keto reductase family PACID_21030 PF00285 Citrate synthase PACID_21040 PF01546 Peptidase family M20/M25/M40 PACID_21040 PF07687 Peptidase dimerisation domain PACID_21050 PF00665 Integrase core domain PACID_21070 PF00589 Phage integrase family PACID_21080 PF13358 DDE superfamily endonuclease PACID_21080 PF13565 PACID_21080 PACID_21090 PF00356 Bacterial regulatory proteins, lacI family PACID_21090 PF13377 Periplasmic binding protein-like domain PACID_21100 PF02610 L-arabinose isomerase PACID_21100 PF11762 L-arabinose isomerase C-terminal domain PACID_21110 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_21130 PF00083 Sugar (and other) transporter PACID_21140 PF00356 Bacterial regulatory proteins, lacI family PACID_21140 PF13377 Periplasmic binding protein-like domain PACID_21150 PF13416 Bacterial extracellular solute-binding protein PACID_21170 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) PACID_21180 PF00356 Bacterial regulatory proteins, lacI family PACID_21180 PF13377 Periplasmic binding protein-like domain PACID_21190 PF00528 Binding-protein-dependent transport system inner membrane component PACID_21200 PF00528 Binding-protein-dependent transport system inner membrane component PACID_21210 PF01547 Bacterial extracellular solute-binding protein PACID_21220 PF06964 Alpha-L-arabinofuranosidase C-terminus PACID_21230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_21230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_21240 PF02481 DNA recombination-mediator protein A PACID_21250 PF01078 Magnesium chelatase, subunit ChlI PACID_21250 PF13335 PACID_21250 PACID_21250 PF13541 Subunit ChlI of Mg-chelatase PACID_21260 PF02021 Uncharacterised protein family UPF0102 PACID_21270 PF10611 PACID_21270 PACID_21280 PF01351 Ribonuclease HII PACID_21290 PF00717 Peptidase S24-like PACID_21300 PF01245 Ribosomal protein L19 PACID_21310 PF13085 2Fe-2S iron-sulfur cluster binding domain PACID_21310 PF13183 4Fe-4S dicluster domain PACID_21320 PF00890 FAD binding domain PACID_21320 PF02910 Fumarate reductase flavoprotein C-term PACID_21340 PF01746 tRNA (Guanine-1)-methyltransferase PACID_21350 PF01782 RimM N-terminal domain PACID_21350 PF05239 PRC-barrel domain PACID_21360 PF13083 KH domain PACID_21370 PF00886 Ribosomal protein S16 PACID_21380 PF01979 Amidohydrolase family PACID_21390 PF00448 SRP54-type protein, GTPase domain PACID_21390 PF02881 SRP54-type protein, helical bundle domain PACID_21390 PF02978 Signal peptide binding domain PACID_21400 PF00756 Putative esterase PACID_21420 PF00892 EamA-like transporter family PACID_21440 PF00535 Glycosyl transferase family 2 PACID_21450 PF00448 SRP54-type protein, GTPase domain PACID_21450 PF02881 SRP54-type protein, helical bundle domain PACID_21470 PF04138 PACID_21470 PACID_21480 PF13560 Helix-turn-helix domain PACID_21490 PF10012 PACID_21490 PACID_21510 PF07883 Cupin domain PACID_21520 PF00248 Aldo/keto reductase family PACID_21530 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain PACID_21530 PF06827 Zinc finger found in FPG and IleRS PACID_21530 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_21540 PF00035 Double-stranded RNA binding motif PACID_21540 PF14622 Ribonuclease-III-like PACID_21550 PF01783 Ribosomal L32p protein family PACID_21560 PF02620 PACID_21560 PACID_21570 PF01467 Cytidylyltransferase PACID_21580 PF03602 Conserved hypothetical protein 95 PACID_21590 PF12900 Pyridoxamine 5'-phosphate oxidase PACID_21600 PF04073 Aminoacyl-tRNA editing domain PACID_21610 PF00270 DEAD/DEAH box helicase PACID_21610 PF00271 Helicase conserved C-terminal domain PACID_21620 PF00830 Ribosomal L28 family PACID_21630 PF00753 Metallo-beta-lactamase superfamily PACID_21630 PF07521 RNA-metabolising metallo-beta-lactamase PACID_21640 PF00583 Acetyltransferase (GNAT) family PACID_21650 PF00205 Thiamine pyrophosphate enzyme, central domain PACID_21650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_21650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PACID_21660 PF11209 PACID_21660 PACID_21670 PF01113 Dihydrodipicolinate reductase, N-terminus PACID_21670 PF05173 Dihydrodipicolinate reductase, C-terminus PACID_21680 PF00013 KH domain PACID_21680 PF00575 S1 RNA binding domain PACID_21680 PF01138 3' exoribonuclease family, domain 1 PACID_21680 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain PACID_21690 PF00312 Ribosomal protein S15 PACID_21700 PF01687 Riboflavin kinase PACID_21700 PF06574 FAD synthetase PACID_21710 PF01909 Nucleotidyltransferase domain PACID_21720 PF01934 Protein of unknown function DUF86 PACID_21730 PF01509 TruB family pseudouridylate synthase (N terminal domain) PACID_21730 PF09142 tRNA Pseudouridine synthase II, C terminal PACID_21730 PF16198 PACID_21730 PACID_21740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 PACID_21740 PF00874 PRD domain PACID_21740 PF08279 HTH domain PACID_21750 PF06923 PACID_21750 PACID_21760 PF03608 PACID_21760 PACID_21770 PF03612 PACID_21770 PACID_21770 PF07663 PACID_21770 PACID_21780 PF03829 PTS system glucitol/sorbitol-specific IIA component PACID_21790 PF00381 PTS HPr component phosphorylation site PACID_21800 PF13685 Iron-containing alcohol dehydrogenase PACID_21810 PF02033 Ribosome-binding factor A PACID_21820 PF03109 PACID_21820 PACID_21830 PF00009 Elongation factor Tu GTP binding domain PACID_21830 PF04760 Translation initiation factor IF-2, N-terminal region PACID_21830 PF11987 Translation-initiation factor 2 PACID_21840 PF04296 Protein of unknown function (DUF448) PACID_21850 PF08529 NusA N-terminal domain PACID_21850 PF13184 NusA-like KH domain PACID_21860 PF02576 Uncharacterised BCR, YhbC family COG0779 PACID_21860 PF17384 PACID_21860 PACID_21870 PF14530 Domain of unknown function (DUF4439) PACID_21880 PF01925 PACID_21880 PACID_21890 PF11706 CGNR zinc finger PACID_21900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_21900 PF03129 Anticodon binding domain PACID_21900 PF04073 Aminoacyl-tRNA editing domain PACID_21920 PF01841 Transglutaminase-like superfamily PACID_21920 PF08379 PACID_21920 PACID_21930 PF04168 PACID_21930 PACID_21940 PF14403 PACID_21940 PACID_21950 PF07731 Multicopper oxidase PACID_21950 PF07732 Multicopper oxidase PACID_21970 PF13312 PACID_21970 PACID_21980 PF04551 GcpE protein PACID_21990 PF02163 Peptidase family M50 PACID_21990 PF13180 PDZ domain PACID_22000 PF00144 Beta-lactamase PACID_22010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase PACID_22010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain PACID_22020 PF04055 Radical SAM superfamily PACID_22030 PF01148 Cytidylyltransferase family PACID_22040 PF01765 Ribosome recycling factor PACID_22050 PF00696 Amino acid kinase family PACID_22060 PF00889 Elongation factor TS PACID_22070 PF00318 Ribosomal protein S2 PACID_22080 PF00665 Integrase core domain PACID_22100 PF07728 AAA domain (dynein-related subfamily) PACID_22120 PF05762 VWA domain containing CoxE-like protein PACID_22130 PF04434 PACID_22130 PACID_22140 PF01551 Peptidase family M23 PACID_22150 PF00589 Phage integrase family PACID_22150 PF02899 Phage integrase, N-terminal SAM-like domain PACID_22160 PF10282 Lactonase, 7-bladed beta-propeller PACID_22170 PF01327 Polypeptide deformylase PACID_22180 PF01381 Helix-turn-helix PACID_22210 PF00588 SpoU rRNA Methylase family PACID_22220 PF13593 SBF-like CPA transporter family (DUF4137) PACID_22230 PF01145 SPFH domain / Band 7 family PACID_22240 PF01957 NfeD-like C-terminal, partner-binding PACID_22250 PF00005 ABC transporter PACID_22270 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase PACID_22270 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal PACID_22270 PF13288 DXP reductoisomerase C-terminal domain PACID_22280 PF00206 Lyase PACID_22280 PF10415 Fumarase C C-terminus PACID_22290 PF01636 Phosphotransferase enzyme family PACID_22300 PF13561 Enoyl-(Acyl carrier protein) reductase PACID_22310 PF13561 Enoyl-(Acyl carrier protein) reductase PACID_22320 PF11298 PACID_22320 PACID_22330 PF02104 PACID_22330 PACID_22340 PF13561 Enoyl-(Acyl carrier protein) reductase PACID_22350 PF13649 Methyltransferase domain PACID_22370 PF00005 ABC transporter PACID_22370 PF12848 ABC transporter PACID_22380 PF13673 Acetyltransferase (GNAT) domain PACID_22410 PF04228 PACID_22410 PACID_22450 PF01883 Domain of unknown function DUF59 PACID_22460 PF01592 NifU-like N terminal domain PACID_22470 PF00266 Aminotransferase class-V PACID_22480 PF00005 ABC transporter PACID_22490 PF00355 Rieske [2Fe-2S] domain PACID_22500 PF01458 Uncharacterized protein family (UPF0051) PACID_22510 PF01458 Uncharacterized protein family (UPF0051) PACID_22520 PF01022 Bacterial regulatory protein, arsR family PACID_22530 PF00665 Integrase core domain PACID_22540 PF13416 Bacterial extracellular solute-binding protein PACID_22560 PF00528 Binding-protein-dependent transport system inner membrane component PACID_22560 PF16296 PACID_22560 PACID_22570 PF00528 Binding-protein-dependent transport system inner membrane component PACID_22580 PF00356 Bacterial regulatory proteins, lacI family PACID_22590 PF00872 PACID_22590 PACID_22600 PF13377 Periplasmic binding protein-like domain PACID_22620 PF03030 Inorganic H+ pyrophosphatase PACID_22630 PF00005 ABC transporter PACID_22640 PF01061 PACID_22640 PACID_22650 PF02628 PACID_22650 PACID_22660 PF01040 UbiA prenyltransferase family PACID_22670 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain PACID_22670 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain PACID_22680 PF10128 PACID_22680 PACID_22690 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase PACID_22700 PF13462 Thioredoxin PACID_22710 PF00133 tRNA synthetases class I (I, L, M and V) PACID_22710 PF08264 Anticodon-binding domain of tRNA PACID_22730 PF04978 Protein of unknown function (DUF664) PACID_22740 PF03572 Peptidase family S41 PACID_22740 PF07676 WD40-like Beta Propeller Repeat PACID_22740 PF14684 Tricorn protease C1 domain PACID_22740 PF14685 Tricorn protease PDZ domain PACID_22760 PF06689 ClpX C4-type zinc finger PACID_22760 PF07724 AAA domain (Cdc48 subfamily) PACID_22760 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_22770 PF00574 Clp protease PACID_22780 PF00574 Clp protease PACID_22790 PF01594 PACID_22790 PACID_22800 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PACID_22800 PF05697 Bacterial trigger factor protein (TF) PACID_22800 PF05698 Bacterial trigger factor protein (TF) C-terminus PACID_22820 PF00589 Phage integrase family PACID_22870 PF00665 Integrase core domain PACID_22870 PF13276 PACID_22870 PACID_22880 PF04326 Divergent AAA domain PACID_22900 PF01609 Transposase DDE domain PACID_22900 PF13006 PACID_22900 PACID_22910 PF13701 PACID_22910 PACID_22940 PF00872 PACID_22940 PACID_22950 PF01610 PACID_22950 PACID_22950 PF14690 PACID_22950 PACID_22960 PF01610 PACID_22960 PACID_22960 PF14690 PACID_22960 PACID_22990 PF06616 BsuBI/PstI restriction endonuclease C-terminus PACID_23000 PF00398 Ribosomal RNA adenine dimethylase PACID_23000 PF07669 Eco57I restriction-modification methylase PACID_23020 PF12697 Alpha/beta hydrolase family PACID_23030 PF00152 tRNA synthetases class II (D, K and N) PACID_23030 PF01336 OB-fold nucleic acid binding domain PACID_23030 PF09924 Uncharacterized conserved protein (DUF2156) PACID_23030 PF16995 PACID_23030 PACID_23050 PF06827 Zinc finger found in FPG and IleRS PACID_23050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain PACID_23070 PF02502 Ribose/Galactose Isomerase PACID_23080 PF13527 Acetyltransferase (GNAT) domain PACID_23080 PF13530 Sterol carrier protein domain PACID_23090 PF13302 Acetyltransferase (GNAT) domain PACID_23100 PF00533 BRCA1 C Terminus (BRCT) domain PACID_23100 PF01653 NAD-dependent DNA ligase adenylation domain PACID_23100 PF03119 NAD-dependent DNA ligase C4 zinc finger domain PACID_23100 PF03120 NAD-dependent DNA ligase OB-fold domain PACID_23100 PF12826 Helix-hairpin-helix motif PACID_23120 PF01433 Peptidase family M1 PACID_23120 PF11838 ERAP1-like C-terminal domain PACID_23140 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain PACID_23140 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase PACID_23150 PF13302 Acetyltransferase (GNAT) domain PACID_23160 PF07690 Major Facilitator Superfamily PACID_23170 PF01047 MarR family PACID_23180 PF03061 Thioesterase superfamily PACID_23180 PF13279 Thioesterase-like superfamily PACID_23190 PF00501 AMP-binding enzyme PACID_23200 PF00501 AMP-binding enzyme PACID_23210 PF12802 MarR family PACID_23220 PF01565 FAD binding domain PACID_23220 PF02913 FAD linked oxidases, C-terminal domain PACID_23220 PF13183 4Fe-4S dicluster domain PACID_23230 PF00005 ABC transporter PACID_23230 PF12848 ABC transporter PACID_23240 PF00436 Single-strand binding protein family PACID_23250 PF13367 PACID_23250 PACID_23270 PF00929 Exonuclease PACID_23290 PF13489 Methyltransferase domain PACID_23310 PF03352 Methyladenine glycosylase PACID_23320 PF01177 Asp/Glu/Hydantoin racemase PACID_23350 PF13560 Helix-turn-helix domain PACID_23370 PF00271 Helicase conserved C-terminal domain PACID_23410 PF00440 Bacterial regulatory proteins, tetR family PACID_23420 PF05368 NmrA-like family PACID_23440 PF01814 Hemerythrin HHE cation binding domain PACID_23450 PF01177 Asp/Glu/Hydantoin racemase PACID_23460 PF04073 Aminoacyl-tRNA editing domain PACID_23470 PF02567 Phenazine biosynthesis-like protein PACID_23480 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PACID_23490 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_23500 PF11373 PACID_23500 PACID_23510 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) PACID_23520 PF00072 Response regulator receiver domain PACID_23520 PF00196 Bacterial regulatory proteins, luxR family PACID_23530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_23530 PF07730 Histidine kinase PACID_23550 PF00005 ABC transporter PACID_23570 PF00324 Amino acid permease PACID_23580 PF00881 Nitroreductase family PACID_23590 PF01061 PACID_23590 PACID_23600 PF00005 ABC transporter PACID_23610 PF12802 MarR family PACID_23620 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily PACID_23640 PF03601 PACID_23640 PACID_23650 PF00005 ABC transporter PACID_23660 PF13520 Amino acid permease PACID_23670 PF06983 3-demethylubiquinone-9 3-methyltransferase PACID_23680 PF02811 PHP domain PACID_23680 PF07733 Bacterial DNA polymerase III alpha subunit PACID_23680 PF14579 Helix-hairpin-helix motif PACID_23690 PF00817 impB/mucB/samB family PACID_23720 PF08245 Mur ligase middle domain PACID_23720 PF08353 PACID_23720 PACID_23730 PF07685 CobB/CobQ-like glutamine amidotransferase domain PACID_23750 PF00117 Glutamine amidotransferase class-I PACID_23760 PF00166 Chaperonin 10 Kd subunit PACID_23770 PF12277 PACID_23770 PACID_23780 PF00578 AhpC/TSA family PACID_23800 PF01872 RibD C-terminal domain PACID_23810 PF00817 impB/mucB/samB family PACID_23810 PF11799 impB/mucB/samB family C-terminal domain PACID_23820 PF00186 Dihydrofolate reductase PACID_23830 PF00303 Thymidylate synthase PACID_23840 PF01725 Ham1 family PACID_23850 PF01138 3' exoribonuclease family, domain 1 PACID_23850 PF03725 3' exoribonuclease family, domain 2 PACID_23860 PF01177 Asp/Glu/Hydantoin racemase PACID_23870 PF09012 FeoC like transcriptional regulator PACID_23880 PF02421 Ferrous iron transport protein B PACID_23880 PF07664 PACID_23880 PACID_23880 PF07670 Nucleoside recognition PACID_23890 PF04023 FeoA domain PACID_23900 PF09438 PACID_23900 PACID_23910 PF02617 ATP-dependent Clp protease adaptor protein ClpS PACID_23930 PF00216 Bacterial DNA-binding protein PACID_23940 PF02446 4-alpha-glucanotransferase PACID_23950 PF06271 PACID_23950 PACID_23950 PF10708 PACID_23950 PACID_23970 PF11238 PACID_23970 PACID_23980 PF01220 Dehydroquinase class II PACID_23990 PF01545 Cation efflux family PACID_24000 PF10432 Bacterial phospho-glucose isomerase C-terminal region PACID_24010 PF08271 TFIIB zinc-binding PACID_24020 PF12005 PACID_24020 PACID_24030 PF06262 Possibl zinc metallo-peptidase PACID_24060 PF02467 PACID_24060 PACID_24090 PF00483 Nucleotidyl transferase PACID_24110 PF13641 Glycosyltransferase like family 2 PACID_24120 PF03816 Cell envelope-related transcriptional attenuator domain PACID_24130 PF00731 AIR carboxylase PACID_24140 PF02222 ATP-grasp domain PACID_24150 PF03703 PACID_24150 PACID_24160 PF03575 Peptidase family S51 PACID_24170 PF03099 Biotin/lipoate A/B protein ligase family PACID_24180 PF01039 Carboxyl transferase domain PACID_24190 PF13822 PACID_24190 PACID_24200 PF02545 Maf-like protein PACID_24220 PF02274 Amidinotransferase PACID_24230 PF00106 short chain dehydrogenase PACID_24240 PF06224 PACID_24240 PACID_24250 PF08543 Phosphomethylpyrimidine kinase PACID_24260 PF00293 NUDIX domain PACID_24270 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain PACID_24270 PF00364 Biotin-requiring enzyme PACID_24270 PF02785 Biotin carboxylase C-terminal domain PACID_24270 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain PACID_24290 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_24290 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_24300 PF01048 Phosphorylase superfamily PACID_24310 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_24310 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_24310 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_24310 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_24320 PF00501 AMP-binding enzyme PACID_24320 PF13193 AMP-binding enzyme C-terminal domain PACID_24340 PF09972 PACID_24340 PACID_24360 PF00202 Aminotransferase class-III PACID_24370 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PACID_24380 PF09338 PACID_24380 PACID_24400 PF07355 PACID_24400 PACID_24410 PF00440 Bacterial regulatory proteins, tetR family PACID_24420 PF05544 Proline racemase PACID_24430 PF00485 Phosphoribulokinase / Uridine kinase family PACID_24440 PF08264 Anticodon-binding domain of tRNA PACID_24440 PF09334 tRNA synthetases class I (M) PACID_24450 PF00075 RNase H PACID_24460 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_24470 PF02653 PACID_24470 PACID_24480 PF02653 PACID_24480 PACID_24490 PF00005 ABC transporter PACID_24500 PF02608 Basic membrane protein PACID_24510 PF01636 Phosphotransferase enzyme family PACID_24520 PF00571 CBS domain PACID_24520 PF01595 PACID_24520 PACID_24520 PF03471 Transporter associated domain PACID_24540 PF03971 Monomeric isocitrate dehydrogenase PACID_24550 PF00551 Formyl transferase PACID_24550 PF01842 ACT domain PACID_24560 PF00056 lactate/malate dehydrogenase, NAD binding domain PACID_24560 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain PACID_24580 PF00171 Aldehyde dehydrogenase family PACID_24590 PF11222 PACID_24590 PACID_24600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain PACID_24600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain PACID_24620 PF01808 AICARFT/IMPCHase bienzyme PACID_24620 PF02142 MGS-like domain PACID_24630 PF00551 Formyl transferase PACID_24640 PF00885 6,7-dimethyl-8-ribityllumazine synthase PACID_24650 PF00925 GTP cyclohydrolase II PACID_24650 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase PACID_24660 PF00677 Lumazine binding domain PACID_24670 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_24670 PF01872 RibD C-terminal domain PACID_24700 PF00549 CoA-ligase PACID_24700 PF02629 CoA binding domain PACID_24710 PF00549 CoA-ligase PACID_24710 PF08442 ATP-grasp domain PACID_24720 PF01551 Peptidase family M23 PACID_24730 PF00580 UvrD/REP helicase N-terminal domain PACID_24730 PF13361 UvrD-like helicase C-terminal domain PACID_24760 PF03180 NLPA lipoprotein PACID_24770 PF00005 ABC transporter PACID_24770 PF09383 NIL domain PACID_24780 PF00528 Binding-protein-dependent transport system inner membrane component PACID_24790 PF13091 PLD-like domain PACID_24800 PF04226 PACID_24800 PACID_24810 PF00072 Response regulator receiver domain PACID_24810 PF00196 Bacterial regulatory proteins, luxR family PACID_24820 PF04024 PACID_24820 PACID_24830 PF04024 PACID_24830 PACID_24850 PF04024 PACID_24850 PACID_24860 PF00117 Glutamine amidotransferase class-I PACID_24860 PF00958 GMP synthase C terminal domain PACID_24860 PF02540 NAD synthase PACID_24870 PF00132 Bacterial transferase hexapeptide (six repeats) PACID_24880 PF01817 Chorismate mutase type II PACID_24900 PF00478 IMP dehydrogenase / GMP reductase domain PACID_24910 PF00478 IMP dehydrogenase / GMP reductase domain PACID_24910 PF00571 CBS domain PACID_24920 PF13231 PACID_24920 PACID_24930 PF00118 TCP-1/cpn60 chaperonin family PACID_24940 PF00166 Chaperonin 10 Kd subunit PACID_24950 PF04402 Protein of unknown function (DUF541) PACID_24970 PF00293 NUDIX domain PACID_24980 PF01875 Memo-like protein PACID_24990 PF01871 AMMECR1 PACID_25000 PF04055 Radical SAM superfamily PACID_25000 PF13353 4Fe-4S single cluster domain PACID_25010 PF03051 Peptidase C1-like family PACID_25020 PF00814 Glycoprotease family PACID_25030 PF00583 Acetyltransferase (GNAT) family PACID_25040 PF00814 Glycoprotease family PACID_25050 PF02367 Uncharacterised P-loop hydrolase UPF0079 PACID_25060 PF00270 DEAD/DEAH box helicase PACID_25060 PF00271 Helicase conserved C-terminal domain PACID_25070 PF00534 Glycosyl transferases group 1 PACID_25070 PF13439 Glycosyltransferase Family 4 PACID_25080 PF01256 Carbohydrate kinase PACID_25080 PF03853 YjeF-related protein N-terminus PACID_25090 PF01648 4'-phosphopantetheinyl transferase superfamily PACID_25100 PF01380 SIS domain PACID_25100 PF13522 Glutamine amidotransferase domain PACID_25110 PF08241 Methyltransferase domain PACID_25120 PF00485 Phosphoribulokinase / Uridine kinase family PACID_25140 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain PACID_25140 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PACID_25140 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PACID_25140 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PACID_25150 PF13561 Enoyl-(Acyl carrier protein) reductase PACID_25160 PF00380 Ribosomal protein S9/S16 PACID_25170 PF00572 Ribosomal protein L13 PACID_25180 PF03733 PACID_25180 PACID_25190 PF07690 Major Facilitator Superfamily PACID_25200 PF01047 MarR family PACID_25210 PF02390 Putative methyltransferase PACID_25220 PF01416 tRNA pseudouridine synthase PACID_25230 PF05175 Methyltransferase small domain PACID_25250 PF02361 Cobalt transport protein PACID_25260 PF00005 ABC transporter PACID_25270 PF12822 Protein of unknown function (DUF3816) PACID_25280 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain PACID_25280 PF02777 Iron/manganese superoxide dismutases, C-terminal domain PACID_25290 PF00117 Glutamine amidotransferase class-I PACID_25310 PF13579 Glycosyl transferase 4-like domain PACID_25310 PF13692 Glycosyl transferases group 1 PACID_25320 PF01196 Ribosomal protein L17 PACID_25330 PF01000 RNA polymerase Rpb3/RpoA insert domain PACID_25330 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain PACID_25330 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain PACID_25350 PF00163 Ribosomal protein S4/S9 N-terminal domain PACID_25350 PF01479 S4 domain PACID_25360 PF00411 Ribosomal protein S11 PACID_25370 PF00416 Ribosomal protein S13/S18 PACID_25380 PF00444 Ribosomal protein L36 PACID_25390 PF01176 Translation initiation factor 1A / IF-1 PACID_25400 PF08044 PACID_25400 PACID_25410 PF04480 Protein of unknown function (DUF559) PACID_25420 PF00557 Metallopeptidase family M24 PACID_25430 PF00406 Adenylate kinase PACID_25440 PF00344 SecY translocase PACID_25460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_25470 PF00005 ABC transporter PACID_25470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_25480 PF00528 Binding-protein-dependent transport system inner membrane component PACID_25480 PF12911 PACID_25480 PACID_25490 PF00528 Binding-protein-dependent transport system inner membrane component PACID_25500 PF00828 Ribosomal protein L18e/L15 PACID_25510 PF00327 Ribosomal protein L30p/L7e PACID_25520 PF00333 Ribosomal protein S5, N-terminal domain PACID_25520 PF03719 Ribosomal protein S5, C-terminal domain PACID_25530 PF00861 Ribosomal L18p/L5e family PACID_25540 PF00347 Ribosomal protein L6 PACID_25550 PF00410 Ribosomal protein S8 PACID_25560 PF00253 Ribosomal protein S14p/S29e PACID_25570 PF00281 Ribosomal protein L5 PACID_25570 PF00673 ribosomal L5P family C-terminus PACID_25580 PF00467 KOW motif PACID_25580 PF17136 PACID_25580 PACID_25590 PF00238 Ribosomal protein L14p/L23e PACID_25610 PF00528 Binding-protein-dependent transport system inner membrane component PACID_25620 PF00528 Binding-protein-dependent transport system inner membrane component PACID_25640 PF01547 Bacterial extracellular solute-binding protein PACID_25650 PF00356 Bacterial regulatory proteins, lacI family PACID_25650 PF13377 Periplasmic binding protein-like domain PACID_25660 PF00703 Glycosyl hydrolases family 2 PACID_25660 PF02836 Glycosyl hydrolases family 2, TIM barrel domain PACID_25660 PF02837 Glycosyl hydrolases family 2, sugar binding domain PACID_25670 PF00366 Ribosomal protein S17 PACID_25680 PF00831 Ribosomal L29 protein PACID_25690 PF00252 Ribosomal protein L16p/L10e PACID_25700 PF00189 Ribosomal protein S3, C-terminal domain PACID_25700 PF07650 KH domain PACID_25710 PF00237 Ribosomal protein L22p/L17e PACID_25720 PF00203 Ribosomal protein S19 PACID_25730 PF00181 Ribosomal Proteins L2, RNA binding domain PACID_25730 PF03947 Ribosomal Proteins L2, C-terminal domain PACID_25740 PF00276 Ribosomal protein L23 PACID_25750 PF00573 Ribosomal protein L4/L1 family PACID_25760 PF00297 Ribosomal protein L3 PACID_25770 PF00338 Ribosomal protein S10p/S20e PACID_25780 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_25800 PF00749 tRNA synthetases class I (E and Q), catalytic domain PACID_25800 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain PACID_25810 PF04978 Protein of unknown function (DUF664) PACID_25820 PF10081 PACID_25820 PACID_25820 PF15420 PACID_25820 PACID_25830 PF00009 Elongation factor Tu GTP binding domain PACID_25830 PF03143 Elongation factor Tu C-terminal domain PACID_25830 PF03144 Elongation factor Tu domain 2 PACID_25850 PF00009 Elongation factor Tu GTP binding domain PACID_25850 PF00679 Elongation factor G C-terminus PACID_25850 PF03144 Elongation factor Tu domain 2 PACID_25850 PF03764 Elongation factor G, domain IV PACID_25850 PF14492 Elongation Factor G, domain II PACID_25860 PF00177 Ribosomal protein S7p/S5e PACID_25870 PF00164 Ribosomal protein S12/S23 PACID_25880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_25910 PF00623 RNA polymerase Rpb1, domain 2 PACID_25910 PF04983 RNA polymerase Rpb1, domain 3 PACID_25910 PF04997 RNA polymerase Rpb1, domain 1 PACID_25910 PF04998 RNA polymerase Rpb1, domain 5 PACID_25910 PF05000 RNA polymerase Rpb1, domain 4 PACID_25920 PF00562 RNA polymerase Rpb2, domain 6 PACID_25920 PF04560 RNA polymerase Rpb2, domain 7 PACID_25920 PF04561 RNA polymerase Rpb2, domain 2 PACID_25920 PF04563 RNA polymerase beta subunit PACID_25920 PF04565 RNA polymerase Rpb2, domain 3 PACID_25920 PF10385 RNA polymerase beta subunit external 1 domain PACID_25930 PF00542 Ribosomal protein L7/L12 C-terminal domain PACID_25930 PF16320 PACID_25930 PACID_25940 PF00466 Ribosomal protein L10 PACID_25950 PF00687 Ribosomal protein L1p/L10e family PACID_25960 PF00298 Ribosomal protein L11, RNA binding domain PACID_25960 PF03946 Ribosomal protein L11, N-terminal domain PACID_25970 PF02357 Transcription termination factor nusG PACID_25980 PF00584 SecE/Sec61-gamma subunits of protein translocation complex PACID_26000 PF12897 Alanine-glyoxylate amino-transferase PACID_26010 PF01565 FAD binding domain PACID_26010 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain PACID_26020 PF01575 MaoC like domain PACID_26030 PF13452 N-terminal half of MaoC dehydratase PACID_26040 PF00471 Ribosomal protein L33 PACID_26080 PF04461 Protein of unknown function (DUF520) PACID_26090 PF03372 Endonuclease/Exonuclease/phosphatase family PACID_26100 PF16113 PACID_26100 PACID_26120 PF12838 4Fe-4S dicluster domain PACID_26130 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PACID_26140 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PACID_26150 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase PACID_26150 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PACID_26150 PF17147 PACID_26150 PACID_26160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PACID_26170 PF01431 Peptidase family M13 PACID_26170 PF05649 Peptidase family M13 PACID_26190 PF02653 PACID_26190 PACID_26200 PF02653 PACID_26200 PACID_26210 PF00005 ABC transporter PACID_26220 PF13407 Periplasmic binding protein domain PACID_26230 PF03328 HpcH/HpaI aldolase/citrate lyase family PACID_26240 PF05985 Ethanolamine ammonia-lyase light chain (EutC) PACID_26250 PF06751 Ethanolamine ammonia lyase large subunit (EutB) PACID_26260 PF13520 Amino acid permease PACID_26270 PF00348 Polyprenyl synthetase PACID_26280 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains PACID_26290 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains PACID_26300 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains PACID_26300 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus PACID_26310 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L PACID_26320 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 PACID_26330 PF12838 4Fe-4S dicluster domain PACID_26340 PF00146 NADH dehydrogenase PACID_26350 PF00384 Molybdopterin oxidoreductase PACID_26350 PF01568 Molydopterin dinucleotide binding domain PACID_26350 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region PACID_26350 PF13510 2Fe-2S iron-sulfur cluster binding domain PACID_26360 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit PACID_26360 PF10531 SLBB domain PACID_26360 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region PACID_26370 PF01257 Thioredoxin-like [2Fe-2S] ferredoxin PACID_26380 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PACID_26390 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit PACID_26400 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit PACID_26410 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 PACID_26420 PF01494 FAD binding domain PACID_26430 PF00425 chorismate binding enzyme PACID_26460 PF01337 Barstar (barnase inhibitor) PACID_26480 PF00005 ABC transporter PACID_26490 PF01209 ubiE/COQ5 methyltransferase family PACID_26500 PF13482 RNase_H superfamily PACID_26510 PF00005 ABC transporter PACID_26510 PF00664 ABC transporter transmembrane region PACID_26520 PF03992 Antibiotic biosynthesis monooxygenase PACID_26530 PF01040 UbiA prenyltransferase family PACID_26540 PF05977 Transmembrane secretion effector PACID_26550 PF02733 Dak1 domain PACID_26560 PF02734 DAK2 domain PACID_26570 PF03610 PTS system fructose IIA component PACID_26580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region PACID_26590 PF00483 Nucleotidyl transferase PACID_26600 PF00288 GHMP kinases N terminal domain PACID_26600 PF08544 GHMP kinases C terminal PACID_26600 PF10509 Galactokinase galactose-binding signature PACID_26610 PF01545 Cation efflux family PACID_26610 PF16916 PACID_26610 PACID_26630 PF01734 Patatin-like phospholipase PACID_26640 PF13242 HAD-hyrolase-like PACID_26640 PF13344 Haloacid dehalogenase-like hydrolase PACID_26650 PF00296 Luciferase-like monooxygenase PACID_26670 PF03358 NADPH-dependent FMN reductase PACID_26690 PF00288 GHMP kinases N terminal domain PACID_26690 PF08544 GHMP kinases C terminal PACID_26700 PF00288 GHMP kinases N terminal domain PACID_26710 PF00288 GHMP kinases N terminal domain PACID_26710 PF08544 GHMP kinases C terminal PACID_26720 PF01070 FMN-dependent dehydrogenase PACID_26730 PF00872 PACID_26730 PACID_26740 PF01844 HNH endonuclease PACID_26740 PF02720 PACID_26740 PACID_26760 PF03551 Transcriptional regulator PadR-like family PACID_26770 PF13460 NADH(P)-binding PACID_26780 PF00391 PEP-utilising enzyme, mobile domain PACID_26780 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PACID_26790 PF01872 RibD C-terminal domain PACID_26820 PF08279 HTH domain PACID_26820 PF13280 PACID_26820 PACID_26830 PF07859 alpha/beta hydrolase fold PACID_26840 PF07859 alpha/beta hydrolase fold PACID_26860 PF14534 Domain of unknown function (DUF4440) PACID_26870 PF05977 Transmembrane secretion effector PACID_26880 PF00561 alpha/beta hydrolase fold PACID_26890 PF00668 Condensation domain PACID_26910 PF08327 Activator of Hsp90 ATPase homolog 1-like protein PACID_26960 PF08239 Bacterial SH3 domain PACID_26980 PF13460 NADH(P)-binding PACID_27020 PF13458 Periplasmic binding protein PACID_27030 PF00005 ABC transporter PACID_27040 PF00005 ABC transporter PACID_27040 PF12399 Branched-chain amino acid ATP-binding cassette transporter PACID_27050 PF02653 PACID_27050 PACID_27060 PF02653 PACID_27060 PACID_27070 PF00528 Binding-protein-dependent transport system inner membrane component PACID_27080 PF00528 Binding-protein-dependent transport system inner membrane component PACID_27090 PF01547 Bacterial extracellular solute-binding protein PACID_27100 PF12146 Putative lysophospholipase PACID_27120 PF00586 AIR synthase related protein, N-terminal domain PACID_27120 PF02769 AIR synthase related protein, C-terminal domain PACID_27130 PF00156 Phosphoribosyl transferase domain PACID_27130 PF13537 Glutamine amidotransferase domain PACID_27140 PF07690 Major Facilitator Superfamily PACID_27150 PF01546 Peptidase family M20/M25/M40 PACID_27150 PF07687 Peptidase dimerisation domain PACID_27170 PF00115 Cytochrome C and Quinol oxidase polypeptide I PACID_27190 PF01145 SPFH domain / Band 7 family PACID_27200 PF00586 AIR synthase related protein, N-terminal domain PACID_27200 PF02769 AIR synthase related protein, C-terminal domain PACID_27210 PF03308 ArgK protein PACID_27220 PF07690 Major Facilitator Superfamily PACID_27230 PF00710 Asparaginase PACID_27240 PF00324 Amino acid permease PACID_27250 PF01433 Peptidase family M1 PACID_27250 PF11838 ERAP1-like C-terminal domain PACID_27260 PF01077 Nitrite and sulphite reductase 4Fe-4S domain PACID_27260 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain PACID_27270 PF13507 CobB/CobQ-like glutamine amidotransferase domain PACID_27280 PF01259 SAICAR synthetase PACID_27280 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase PACID_27290 PF00578 AhpC/TSA family PACID_27290 PF10417 C-terminal domain of 1-Cys peroxiredoxin PACID_27300 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_27310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_27310 PF03466 LysR substrate binding domain PACID_27320 PF00206 Lyase PACID_27320 PF10397 Adenylosuccinate lyase C-terminus PACID_27330 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain PACID_27330 PF02843 Phosphoribosylglycinamide synthetase, C domain PACID_27330 PF02844 Phosphoribosylglycinamide synthetase, N domain PACID_27350 PF07704 PACID_27350 PACID_27360 PF01850 PIN domain PACID_27370 PF00709 Adenylosuccinate synthetase PACID_27380 PF00583 Acetyltransferase (GNAT) family PACID_27390 PF11349 PACID_27390 PACID_27400 PF02583 Metal-sensitive transcriptional repressor PACID_27410 PF00581 Rhodanese-like domain PACID_27410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_27410 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_27430 PF14124 PACID_27430 PACID_27440 PF02452 PemK-like protein PACID_27450 PF00009 Elongation factor Tu GTP binding domain PACID_27450 PF00679 Elongation factor G C-terminus PACID_27450 PF03144 Elongation factor Tu domain 2 PACID_27460 PF03734 L,D-transpeptidase catalytic domain PACID_27460 PF08239 Bacterial SH3 domain PACID_27470 PF02397 PACID_27470 PACID_27480 PF01571 Aminomethyltransferase folate-binding domain PACID_27480 PF08669 Glycine cleavage T-protein C-terminal barrel domain PACID_27490 PF08768 Domain of unknown function (DUF1794) PACID_27510 PF02580 D-Tyr-tRNA(Tyr) deacylase PACID_27520 PF13173 AAA domain PACID_27530 PF07690 Major Facilitator Superfamily PACID_27540 PF00296 Luciferase-like monooxygenase PACID_27550 PF04266 ASCH domain PACID_27570 PF00486 Transcriptional regulatory protein, C terminal PACID_27580 PF02503 Polyphosphate kinase middle domain PACID_27580 PF13089 Polyphosphate kinase N-terminal domain PACID_27580 PF13090 Polyphosphate kinase C-terminal domain PACID_27590 PF00293 NUDIX domain PACID_27590 PF00300 Histidine phosphatase superfamily (branch 1) PACID_27600 PF12849 PBP superfamily domain PACID_27610 PF00528 Binding-protein-dependent transport system inner membrane component PACID_27620 PF00528 Binding-protein-dependent transport system inner membrane component PACID_27630 PF00005 ABC transporter PACID_27640 PF00830 Ribosomal L28 family PACID_27660 PF00872 PACID_27660 PACID_27670 PF01783 Ribosomal L32p protein family PACID_27690 PF01197 Ribosomal protein L31 PACID_27700 PF00471 Ribosomal protein L33 PACID_27720 PF02492 CobW/HypB/UreG, nucleotide-binding domain PACID_27720 PF07683 Cobalamin synthesis protein cobW C-terminal domain PACID_27750 PF00950 PACID_27750 PACID_27760 PF00005 ABC transporter PACID_27780 PF01297 Periplasmic solute binding protein family PACID_27790 PF01497 Periplasmic binding protein PACID_27800 PF01032 FecCD transport family PACID_27810 PF01032 FecCD transport family PACID_27820 PF00005 ABC transporter PACID_27830 PF04954 Siderophore-interacting protein PACID_27830 PF08021 Siderophore-interacting FAD-binding domain PACID_27840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain PACID_27840 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_27850 PF17197 PACID_27850 PACID_27860 PF00920 Dehydratase family PACID_27870 PF00291 Pyridoxal-phosphate dependent enzyme PACID_27870 PF00585 C-terminal regulatory domain of Threonine dehydratase PACID_27880 PF00999 Sodium/hydrogen exchanger family PACID_27890 PF03176 MMPL family PACID_27900 PF01266 FAD dependent oxidoreductase PACID_27900 PF16901 PACID_27900 PACID_27910 PF00106 short chain dehydrogenase PACID_27920 PF10646 PACID_27920 PACID_27930 PF08281 Sigma-70, region 4 PACID_27940 PF01578 PACID_27940 PACID_27950 PF05140 PACID_27950 PACID_27960 PF02683 PACID_27960 PACID_27970 PF00578 AhpC/TSA family PACID_27980 PF00300 Histidine phosphatase superfamily (branch 1) PACID_27990 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases PACID_27990 PF02602 Uroporphyrinogen-III synthase HemD PACID_28010 PF02629 CoA binding domain PACID_28010 PF06971 Putative DNA-binding protein N-terminus PACID_28020 PF05768 Glutaredoxin-like domain (DUF836) PACID_28030 PF03807 NADP oxidoreductase coenzyme F420-dependent PACID_28030 PF14748 Pyrroline-5-carboxylate reductase dimerisation PACID_28040 PF01118 Semialdehyde dehydrogenase, NAD binding domain PACID_28040 PF02774 Semialdehyde dehydrogenase, dimerisation domain PACID_28050 PF02517 CAAX protease self-immunity PACID_28060 PF01619 Proline dehydrogenase PACID_28070 PF01261 Xylose isomerase-like TIM barrel PACID_28080 PF13468 Glyoxalase-like domain PACID_28090 PF13489 Methyltransferase domain PACID_28100 PF13481 AAA domain PACID_28100 PF13541 Subunit ChlI of Mg-chelatase PACID_28110 PF02457 DisA bacterial checkpoint controller nucleotide-binding PACID_28110 PF10635 DisA bacterial checkpoint controller linker region PACID_28130 PF00762 Ferrochelatase PACID_28130 PF06778 Chlorite dismutase PACID_28140 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain PACID_28140 PF01488 Shikimate / quinate 5-dehydrogenase PACID_28140 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain PACID_28150 PF01208 Uroporphyrinogen decarboxylase (URO-D) PACID_28160 PF01593 Flavin containing amine oxidoreductase PACID_28170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain PACID_28170 PF03900 Porphobilinogen deaminase, C-terminal domain PACID_28190 PF02602 Uroporphyrinogen-III synthase HemD PACID_28200 PF00490 Delta-aminolevulinic acid dehydratase PACID_28210 PF00202 Aminotransferase class-III PACID_28220 PF00633 Helix-hairpin-helix motif PACID_28220 PF00730 HhH-GPD superfamily base excision DNA repair protein PACID_28220 PF10576 Iron-sulfur binding domain of endonuclease III PACID_28230 PF01738 Dienelactone hydrolase family PACID_28240 PF00005 ABC transporter PACID_28250 PF00528 Binding-protein-dependent transport system inner membrane component PACID_28260 PF13343 Bacterial extracellular solute-binding protein PACID_28280 PF01694 Rhomboid family PACID_28290 PF01370 NAD dependent epimerase/dehydratase family PACID_28290 PF08338 Domain of unknown function (DUF1731) PACID_28300 PF07690 Major Facilitator Superfamily PACID_28310 PF01844 HNH endonuclease PACID_28310 PF02720 PACID_28310 PACID_28320 PF13460 NADH(P)-binding PACID_28380 PF13020 PACID_28380 PACID_28390 PF02558 Ketopantoate reductase PanE/ApbA PACID_28390 PF08546 Ketopantoate reductase PanE/ApbA C terminal PACID_28400 PF00004 ATPase family associated with various cellular activities (AAA) PACID_28400 PF02151 UvrB/uvrC motif PACID_28400 PF02861 Clp amino terminal domain PACID_28400 PF07724 AAA domain (Cdc48 subfamily) PACID_28400 PF10431 C-terminal, D2-small domain, of ClpB protein PACID_28410 PF11774 Lsr2 PACID_28420 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit PACID_28440 PF11377 PACID_28440 PACID_28450 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) PACID_28460 PF02152 Dihydroneopterin aldolase PACID_28470 PF00809 Pterin binding enzyme PACID_28480 PF01227 GTP cyclohydrolase I PACID_28490 PF00004 ATPase family associated with various cellular activities (AAA) PACID_28490 PF01434 Peptidase family M41 PACID_28490 PF06480 FtsH Extracellular PACID_28500 PF00156 Phosphoribosyl transferase domain PACID_28510 PF01171 PP-loop family PACID_28510 PF09179 TilS substrate binding domain PACID_28520 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family PACID_28530 PF00719 Inorganic pyrophosphatase PACID_28550 PF05448 Acetyl xylan esterase (AXE1) PACID_28560 PF00300 Histidine phosphatase superfamily (branch 1) PACID_28590 PF00909 Ammonium Transporter Family PACID_28600 PF00543 Nitrogen regulatory protein P-II PACID_28620 PF13354 Beta-lactamase enzyme family PACID_28630 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase PACID_28640 PF13354 Beta-lactamase enzyme family PACID_28650 PF01037 AsnC family PACID_28650 PF13404 AsnC-type helix-turn-helix domain PACID_28660 PF02016 LD-carboxypeptidase PACID_28670 PF00005 ABC transporter PACID_28670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_28680 PF00528 Binding-protein-dependent transport system inner membrane component PACID_28680 PF12911 PACID_28680 PACID_28690 PF00528 Binding-protein-dependent transport system inner membrane component PACID_28700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_28710 PF01063 Aminotransferase class IV PACID_28720 PF01244 Membrane dipeptidase (Peptidase family M19) PACID_28730 PF00117 Glutamine amidotransferase class-I PACID_28730 PF00144 Beta-lactamase PACID_28740 PF03358 NADPH-dependent FMN reductase PACID_28750 PF01593 Flavin containing amine oxidoreductase PACID_28780 PF07336 Protein of unknown function (DUF1470) PACID_28780 PF11706 CGNR zinc finger PACID_28800 PF05960 Bacterial protein of unknown function (DUF885) PACID_28820 PF00561 alpha/beta hydrolase fold PACID_28830 PF04468 PACID_28830 PACID_28840 PF07681 PACID_28840 PACID_28850 PF13177 DNA polymerase III, delta subunit PACID_28860 PF02223 Thymidylate kinase PACID_28880 PF01131 DNA topoisomerase PACID_28880 PF01751 Toprim domain PACID_28880 PF13368 PACID_28880 PACID_28890 PF10006 PACID_28890 PACID_28900 PF05175 Methyltransferase small domain PACID_28920 PF00270 DEAD/DEAH box helicase PACID_28920 PF00271 Helicase conserved C-terminal domain PACID_28920 PF09369 PACID_28920 PACID_28940 PF01402 Ribbon-helix-helix protein, copG family PACID_28950 PF05016 Plasmid stabilisation system protein PACID_28960 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system PACID_28990 PF13304 AAA domain PACID_29000 PF01063 Aminotransferase class IV PACID_29030 PF14029 PACID_29030 PACID_29040 PF00482 Type II secretion system (T2SS), protein F PACID_29060 PF00437 Type II/IV secretion system protein PACID_29080 PF08241 Methyltransferase domain PACID_29090 PF07332 PACID_29090 PACID_29100 PF00293 NUDIX domain PACID_29110 PF08534 Redoxin PACID_29120 PF00633 Helix-hairpin-helix motif PACID_29120 PF00730 HhH-GPD superfamily base excision DNA repair protein PACID_29120 PF10576 Iron-sulfur binding domain of endonuclease III PACID_29130 PF00027 Cyclic nucleotide-binding domain PACID_29130 PF13545 Crp-like helix-turn-helix domain PACID_29140 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease PACID_29150 PF13783 PACID_29150 PACID_29170 PF00905 Penicillin binding protein transpeptidase domain PACID_29170 PF00912 Transglycosylase PACID_29170 PF03793 PASTA domain PACID_29180 PF12850 Calcineurin-like phosphoesterase superfamily domain PACID_29220 PF00324 Amino acid permease PACID_29230 PF02574 Homocysteine S-methyltransferase PACID_29240 PF01047 MarR family PACID_29300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle PACID_29310 PF00528 Binding-protein-dependent transport system inner membrane component PACID_29320 PF00528 Binding-protein-dependent transport system inner membrane component PACID_29320 PF12911 PACID_29320 PACID_29330 PF00005 ABC transporter PACID_29330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_29340 PF00005 ABC transporter PACID_29340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region PACID_29350 PF10092 PACID_29350 PACID_29360 PF01569 PAP2 superfamily PACID_29370 PF03883 PACID_29370 PACID_29380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase PACID_29390 PF07859 alpha/beta hydrolase fold PACID_29400 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_29400 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_29410 PF00485 Phosphoribulokinase / Uridine kinase family PACID_29420 PF00140 Sigma-70 factor, region 1 PACID_29420 PF00271 Helicase conserved C-terminal domain PACID_29420 PF04542 Sigma-70 region 2 PACID_29420 PF04545 Sigma-70, region 4 PACID_29420 PF04851 Type III restriction enzyme, res subunit PACID_29430 PF08378 PACID_29430 PACID_29430 PF13245 Part of AAA domain PACID_29440 PF02146 Sir2 family PACID_29450 PF00929 Exonuclease PACID_29460 PF01554 MatE PACID_29470 PF13328 HD domain PACID_29490 PF00561 alpha/beta hydrolase fold PACID_29520 PF04226 PACID_29520 PACID_29540 PF06965 Na+/H+ antiporter 1 PACID_29540 PF13462 Thioredoxin PACID_29560 PF00196 Bacterial regulatory proteins, luxR family PACID_29570 PF00199 Catalase PACID_29570 PF06628 Catalase-related immune-responsive PACID_29580 PF01545 Cation efflux family PACID_29590 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_29620 PF00067 Cytochrome P450 PACID_29630 PF13561 Enoyl-(Acyl carrier protein) reductase PACID_29640 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_29650 PF00210 Ferritin-like domain PACID_29660 PF13561 Enoyl-(Acyl carrier protein) reductase PACID_29670 PF13359 PACID_29670 PACID_29680 PF03631 PACID_29680 PACID_29690 PF14019 PACID_29690 PACID_29710 PF07332 PACID_29710 PACID_29720 PF00141 Peroxidase PACID_29730 PF01475 Ferric uptake regulator family PACID_29770 PF06150 ChaB PACID_29780 PF00248 Aldo/keto reductase family PACID_29790 PF07690 Major Facilitator Superfamily PACID_29800 PF13493 Domain of unknown function (DUF4118) PACID_29810 PF02705 PACID_29810 PACID_29820 PF00512 His Kinase A (phospho-acceptor) domain PACID_29820 PF00582 Universal stress protein family PACID_29820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_29820 PF02702 Osmosensitive K+ channel His kinase sensor domain PACID_29820 PF13493 Domain of unknown function (DUF4118) PACID_29830 PF00072 Response regulator receiver domain PACID_29830 PF00486 Transcriptional regulatory protein, C terminal PACID_29860 PF00271 Helicase conserved C-terminal domain PACID_29870 PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) PACID_29880 PF09344 CT1975-like protein PACID_29890 PF09704 CRISPR-associated protein (Cas_Cas5) PACID_29900 PF08798 CRISPR associated protein PACID_29910 PF01867 CRISPR associated protein Cas1 PACID_29920 PF09707 CRISPR-associated protein (Cas_Cas2CT1978) PACID_29930 PF00872 PACID_29930 PACID_29960 PF13359 PACID_29960 PACID_29960 PF13613 PACID_29960 PACID_29990 PF00083 Sugar (and other) transporter PACID_29990 PF07690 Major Facilitator Superfamily PACID_30000 PF12831 FAD dependent oxidoreductase PACID_30010 PF01614 Bacterial transcriptional regulator PACID_30010 PF09339 IclR helix-turn-helix domain PACID_30020 PF09335 PACID_30020 PACID_30030 PF05653 PACID_30030 PACID_30030 PF13439 Glycosyltransferase Family 4 PACID_30030 PF13692 Glycosyl transferases group 1 PACID_30040 PF00534 Glycosyl transferases group 1 PACID_30040 PF13439 Glycosyltransferase Family 4 PACID_30050 PF00512 His Kinase A (phospho-acceptor) domain PACID_30050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_30060 PF00072 Response regulator receiver domain PACID_30060 PF00486 Transcriptional regulatory protein, C terminal PACID_30070 PF02673 PACID_30070 PACID_30080 PF01569 PAP2 superfamily PACID_30090 PF03649 PACID_30090 PACID_30110 PF00155 Aminotransferase class I and II PACID_30110 PF00392 Bacterial regulatory proteins, gntR family PACID_30120 PF00106 short chain dehydrogenase PACID_30130 PF00202 Aminotransferase class-III PACID_30140 PF00872 PACID_30140 PACID_30150 PF00106 short chain dehydrogenase PACID_30170 PF01380 SIS domain PACID_30180 PF00294 pfkB family carbohydrate kinase PACID_30190 PF11175 Protein of unknown function (DUF2961) PACID_30200 PF13416 Bacterial extracellular solute-binding protein PACID_30210 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30220 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30230 PF04685 Protein of unknown function, DUF608 PACID_30230 PF12215 PACID_30230 PACID_30240 PF00356 Bacterial regulatory proteins, lacI family PACID_30240 PF13407 Periplasmic binding protein domain PACID_30250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_30250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_30260 PF00107 Zinc-binding dehydrogenase PACID_30260 PF08240 Alcohol dehydrogenase GroES-like domain PACID_30270 PF04198 Putative sugar-binding domain PACID_30280 PF01791 DeoC/LacD family aldolase PACID_30290 PF00107 Zinc-binding dehydrogenase PACID_30290 PF08240 Alcohol dehydrogenase GroES-like domain PACID_30310 PF13622 Thioesterase-like superfamily PACID_30320 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_30320 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_30330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_30330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_30340 PF14552 Tautomerase enzyme PACID_30360 PF08310 PACID_30360 PACID_30360 PF13539 D-alanyl-D-alanine carboxypeptidase PACID_30370 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel PACID_30400 PF03591 PACID_30400 PACID_30410 PF05437 PACID_30410 PACID_30420 PF04480 Protein of unknown function (DUF559) PACID_30430 PF00155 Aminotransferase class I and II PACID_30440 PF05872 PACID_30440 PACID_30460 PF13399 LytR cell envelope-related transcriptional attenuator PACID_30470 PF00999 Sodium/hydrogen exchanger family PACID_30470 PF02080 TrkA-C domain PACID_30490 PF00005 ABC transporter PACID_30500 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30510 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30520 PF04069 Substrate binding domain of ABC-type glycine betaine transport system PACID_30530 PF00144 Beta-lactamase PACID_30540 PF01844 HNH endonuclease PACID_30590 PF00107 Zinc-binding dehydrogenase PACID_30590 PF08240 Alcohol dehydrogenase GroES-like domain PACID_30620 PF13440 PACID_30620 PACID_30630 PF14437 PACID_30630 PACID_30650 PF14681 Uracil phosphoribosyltransferase PACID_30690 PF04073 Aminoacyl-tRNA editing domain PACID_30700 PF07690 Major Facilitator Superfamily PACID_30710 PF00128 Alpha amylase, catalytic domain PACID_30710 PF02806 Alpha amylase, C-terminal all-beta domain PACID_30710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) PACID_30730 PF00107 Zinc-binding dehydrogenase PACID_30730 PF16884 PACID_30730 PACID_30740 PF00326 Prolyl oligopeptidase family PACID_30740 PF07676 WD40-like Beta Propeller Repeat PACID_30750 PF03009 Glycerophosphoryl diester phosphodiesterase family PACID_30770 PF12697 Alpha/beta hydrolase family PACID_30800 PF03816 Cell envelope-related transcriptional attenuator domain PACID_30810 PF00356 Bacterial regulatory proteins, lacI family PACID_30810 PF13377 Periplasmic binding protein-like domain PACID_30820 PF00288 GHMP kinases N terminal domain PACID_30820 PF08544 GHMP kinases C terminal PACID_30820 PF10509 Galactokinase galactose-binding signature PACID_30840 PF00474 Sodium:solute symporter family PACID_30880 PF00665 Integrase core domain PACID_30890 PF00107 Zinc-binding dehydrogenase PACID_30890 PF08240 Alcohol dehydrogenase GroES-like domain PACID_30900 PF00764 Arginosuccinate synthase PACID_30910 PF07690 Major Facilitator Superfamily PACID_30920 PF00999 Sodium/hydrogen exchanger family PACID_30930 PF02467 PACID_30930 PACID_30930 PF08281 Sigma-70, region 4 PACID_30940 PF08282 haloacid dehalogenase-like hydrolase PACID_30950 PF00356 Bacterial regulatory proteins, lacI family PACID_30950 PF13377 Periplasmic binding protein-like domain PACID_30960 PF00665 Integrase core domain PACID_30970 PF01547 Bacterial extracellular solute-binding protein PACID_30980 PF00528 Binding-protein-dependent transport system inner membrane component PACID_30990 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31000 PF00150 Cellulase (glycosyl hydrolase family 5) PACID_31000 PF00232 Glycosyl hydrolase family 1 PACID_31010 PF16268 PACID_31010 PACID_31020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) PACID_31020 PF02403 Seryl-tRNA synthetase N-terminal domain PACID_31040 PF00800 Prephenate dehydratase PACID_31040 PF01842 ACT domain PACID_31060 PF03588 Leucyl/phenylalanyl-tRNA protein transferase PACID_31070 PF12787 PACID_31070 PACID_31080 PF00842 Alanine racemase, C-terminal domain PACID_31080 PF01168 Alanine racemase, N-terminal domain PACID_31090 PF14110 PACID_31090 PACID_31100 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) PACID_31100 PF00364 Biotin-requiring enzyme PACID_31100 PF02817 e3 binding domain PACID_31110 PF02779 Transketolase, pyrimidine binding domain PACID_31110 PF02780 Transketolase, C-terminal domain PACID_31120 PF00676 Dehydrogenase E1 component PACID_31130 PF01593 Flavin containing amine oxidoreductase PACID_31130 PF13450 NAD(P)-binding Rossmann-like domain PACID_31140 PF04055 Radical SAM superfamily PACID_31150 PF01074 Glycosyl hydrolases family 38 N-terminal domain PACID_31150 PF07748 Glycosyl hydrolases family 38 C-terminal domain PACID_31150 PF09261 Alpha mannosidase, middle domain PACID_31170 PF01120 Alpha-L-fucosidase PACID_31190 PF08329 Chitinase A, N-terminal domain PACID_31200 PF00083 Sugar (and other) transporter PACID_31210 PF01546 Peptidase family M20/M25/M40 PACID_31210 PF07687 Peptidase dimerisation domain PACID_31220 PF00155 Aminotransferase class I and II PACID_31230 PF00557 Metallopeptidase family M24 PACID_31230 PF01321 Creatinase/Prolidase N-terminal domain PACID_31240 PF00392 Bacterial regulatory proteins, gntR family PACID_31240 PF07729 FCD domain PACID_31250 PF00202 Aminotransferase class-III PACID_31260 PF00171 Aldehyde dehydrogenase family PACID_31270 PF08843 Nucleotidyl transferase of unknown function (DUF1814) PACID_31280 PF09407 Protein of unknown function (DUF2005) PACID_31290 PF13649 Methyltransferase domain PACID_31300 PF12903 Protein of unknown function (DUF3830) PACID_31310 PF01425 Amidase PACID_31320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_31350 PF00005 ABC transporter PACID_31360 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31370 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31380 PF00497 Bacterial extracellular solute-binding proteins, family 3 PACID_31390 PF03632 Glycosyl hydrolase family 65 central catalytic domain PACID_31390 PF03633 Glycosyl hydrolase family 65, C-terminal domain PACID_31390 PF03636 Glycosyl hydrolase family 65, N-terminal domain PACID_31400 PF12840 Helix-turn-helix domain PACID_31410 PF08327 Activator of Hsp90 ATPase homolog 1-like protein PACID_31420 PF04107 Glutamate-cysteine ligase family 2(GCS2) PACID_31450 PF00122 E1-E2 ATPase PACID_31450 PF00702 haloacid dehalogenase-like hydrolase PACID_31460 PF04471 Restriction endonuclease PACID_31460 PF14338 PACID_31460 PACID_31470 PF01925 PACID_31470 PACID_31480 PF02720 PACID_31480 PACID_31500 PF01794 PACID_31500 PACID_31510 PF04205 FMN-binding domain PACID_31520 PF02424 ApbE family PACID_31530 PF00512 His Kinase A (phospho-acceptor) domain PACID_31530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_31540 PF00072 Response regulator receiver domain PACID_31540 PF00486 Transcriptional regulatory protein, C terminal PACID_31550 PF01988 PACID_31550 PACID_31560 PF00251 Glycosyl hydrolases family 32 N-terminal domain PACID_31560 PF08244 Glycosyl hydrolases family 32 C terminal PACID_31570 PF04198 Putative sugar-binding domain PACID_31580 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_31580 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_31590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_31590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_31600 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_31600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_31610 PF00596 Class II Aldolase and Adducin N-terminal domain PACID_31620 PF00248 Aldo/keto reductase family PACID_31630 PF01791 DeoC/LacD family aldolase PACID_31640 PF00107 Zinc-binding dehydrogenase PACID_31640 PF08240 Alcohol dehydrogenase GroES-like domain PACID_31660 PF00083 Sugar (and other) transporter PACID_31670 PF08002 Protein of unknown function (DUF1697) PACID_31680 PF01510 N-acetylmuramoyl-L-alanine amidase PACID_31690 PF13412 Winged helix-turn-helix DNA-binding PACID_31710 PF00115 Cytochrome C and Quinol oxidase polypeptide I PACID_31720 PF13596 PAS domain PACID_31740 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31750 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31760 PF13416 Bacterial extracellular solute-binding protein PACID_31770 PF01547 Bacterial extracellular solute-binding protein PACID_31780 PF02839 Carbohydrate binding domain PACID_31790 PF00356 Bacterial regulatory proteins, lacI family PACID_31790 PF13377 Periplasmic binding protein-like domain PACID_31800 PF00128 Alpha amylase, catalytic domain PACID_31800 PF11941 Domain of unknown function (DUF3459) PACID_31810 PF13671 AAA domain PACID_31820 PF04794 YdjC-like protein PACID_31830 PF01183 Glycosyl hydrolases family 25 PACID_31830 PF08310 PACID_31830 PACID_31840 PF01055 Glycosyl hydrolases family 31 PACID_31860 PF00933 Glycosyl hydrolase family 3 N terminal domain PACID_31860 PF01915 Glycosyl hydrolase family 3 C-terminal domain PACID_31860 PF14310 Fibronectin type III-like domain PACID_31870 PF00128 Alpha amylase, catalytic domain PACID_31870 PF11941 Domain of unknown function (DUF3459) PACID_31880 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase PACID_31890 PF13416 Bacterial extracellular solute-binding protein PACID_31900 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31910 PF00528 Binding-protein-dependent transport system inner membrane component PACID_31930 PF02308 PACID_31930 PACID_31960 PF00135 Carboxylesterase family PACID_31970 PF00480 ROK family PACID_31980 PF13416 Bacterial extracellular solute-binding protein PACID_31990 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32000 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32020 PF00128 Alpha amylase, catalytic domain PACID_32030 PF02872 5'-nucleotidase, C-terminal domain PACID_32040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_32050 PF00005 ABC transporter PACID_32050 PF00664 ABC transporter transmembrane region PACID_32060 PF00005 ABC transporter PACID_32060 PF00664 ABC transporter transmembrane region PACID_32070 PF01451 Low molecular weight phosphotyrosine protein phosphatase PACID_32090 PF02423 Ornithine cyclodeaminase/mu-crystallin family PACID_32100 PF02065 Melibiase PACID_32110 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) PACID_32130 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32140 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32150 PF01547 Bacterial extracellular solute-binding protein PACID_32160 PF00356 Bacterial regulatory proteins, lacI family PACID_32160 PF13377 Periplasmic binding protein-like domain PACID_32180 PF00072 Response regulator receiver domain PACID_32180 PF00486 Transcriptional regulatory protein, C terminal PACID_32190 PF00512 His Kinase A (phospho-acceptor) domain PACID_32190 PF00672 HAMP domain PACID_32190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase PACID_32200 PF07907 PACID_32200 PACID_32210 PF00293 NUDIX domain PACID_32220 PF02674 PACID_32220 PACID_32220 PF13365 Trypsin-like peptidase domain PACID_32230 PF01545 Cation efflux family PACID_32240 PF03795 YCII-related domain PACID_32250 PF04134 PACID_32250 PACID_32260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family PACID_32270 PF00122 E1-E2 ATPase PACID_32270 PF00689 Cation transporting ATPase, C-terminus PACID_32270 PF00690 Cation transporter/ATPase, N-terminus PACID_32270 PF00702 haloacid dehalogenase-like hydrolase PACID_32280 PF04954 Siderophore-interacting protein PACID_32280 PF08021 Siderophore-interacting FAD-binding domain PACID_32290 PF02673 PACID_32290 PACID_32300 PF00398 Ribosomal RNA adenine dimethylase PACID_32320 PF01281 Ribosomal protein L9, N-terminal domain PACID_32320 PF03948 Ribosomal protein L9, C-terminal domain PACID_32330 PF01084 Ribosomal protein S18 PACID_32340 PF00436 Single-strand binding protein family PACID_32350 PF01250 Ribosomal protein S6 PACID_32360 PF04261 Dyp-type peroxidase family PACID_32370 PF09375 Imelysin PACID_32370 PF13473 Cupredoxin-like domain PACID_32380 PF03239 PACID_32380 PACID_32390 PF00581 Rhodanese-like domain PACID_32400 PF00501 AMP-binding enzyme PACID_32420 PF01261 Xylose isomerase-like TIM barrel PACID_32430 PF00106 short chain dehydrogenase PACID_32440 PF01553 Acyltransferase PACID_32470 PF02388 FemAB family PACID_32480 PF01168 Alanine racemase, N-terminal domain PACID_32500 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_32500 PF14759 Reductase C-terminal PACID_32510 PF00155 Aminotransferase class I and II PACID_32520 PF01565 FAD binding domain PACID_32520 PF02913 FAD linked oxidases, C-terminal domain PACID_32550 PF07730 Histidine kinase PACID_32560 PF00072 Response regulator receiver domain PACID_32560 PF00196 Bacterial regulatory proteins, luxR family PACID_32570 PF09594 PACID_32570 PACID_32580 PF00005 ABC transporter PACID_32630 PF01609 Transposase DDE domain PACID_32630 PF13006 PACID_32630 PACID_32670 PF00005 ABC transporter PACID_32680 PF07730 Histidine kinase PACID_32690 PF02754 PACID_32690 PACID_32690 PF13183 4Fe-4S dicluster domain PACID_32700 PF00890 FAD binding domain PACID_32710 PF01266 FAD dependent oxidoreductase PACID_32710 PF04324 BFD-like [2Fe-2S] binding domain PACID_32720 PF12802 MarR family PACID_32730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain PACID_32730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain PACID_32740 PF00654 Voltage gated chloride channel PACID_32750 PF00324 Amino acid permease PACID_32760 PF12802 MarR family PACID_32770 PF04264 YceI-like domain PACID_32790 PF00149 Calcineurin-like phosphoesterase PACID_32800 PF13476 AAA domain PACID_32830 PF01554 MatE PACID_32840 PF00440 Bacterial regulatory proteins, tetR family PACID_32860 PF01063 Aminotransferase class IV PACID_32870 PF00294 pfkB family carbohydrate kinase PACID_32890 PF04073 Aminoacyl-tRNA editing domain PACID_32900 PF01547 Bacterial extracellular solute-binding protein PACID_32910 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32920 PF00528 Binding-protein-dependent transport system inner membrane component PACID_32930 PF00356 Bacterial regulatory proteins, lacI family PACID_32930 PF13377 Periplasmic binding protein-like domain PACID_32960 PF02585 GlcNAc-PI de-N-acetylase PACID_32980 PF13602 Zinc-binding dehydrogenase PACID_32990 PF03734 L,D-transpeptidase catalytic domain PACID_33010 PF00251 Glycosyl hydrolases family 32 N-terminal domain PACID_33010 PF08244 Glycosyl hydrolases family 32 C terminal PACID_33020 PF00294 pfkB family carbohydrate kinase PACID_33030 PF02452 PemK-like protein PACID_33040 PF01402 Ribbon-helix-helix protein, copG family PACID_33060 PF01850 PIN domain PACID_33070 PF00795 Carbon-nitrogen hydrolase PACID_33070 PF02540 NAD synthase PACID_33080 PF13806 Rieske-like [2Fe-2S] domain PACID_33100 PF00005 ABC transporter PACID_33100 PF00498 FHA domain PACID_33100 PF01061 PACID_33100 PACID_33110 PF00069 Protein kinase domain PACID_33140 PF00365 Phosphofructokinase PACID_33150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain PACID_33150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain PACID_33160 PF12146 Putative lysophospholipase PACID_33200 PF02586 Uncharacterised ACR, COG2135 PACID_33230 PF01925 PACID_33230 PACID_33250 PF03734 L,D-transpeptidase catalytic domain PACID_33260 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel PACID_33260 PF08239 Bacterial SH3 domain PACID_33270 PF00285 Citrate synthase PACID_33280 PF00962 Adenosine/AMP deaminase PACID_33300 PF01844 HNH endonuclease PACID_33300 PF02720 PACID_33300 PACID_33320 PF00728 Glycosyl hydrolase family 20, catalytic domain PACID_33320 PF02838 Glycosyl hydrolase family 20, domain 2 PACID_33340 PF13274 PACID_33340 PACID_33370 PF13280 PACID_33370 PACID_33380 PF00654 Voltage gated chloride channel PACID_33400 PF05167 Uncharacterised ACR (DUF711) PACID_33410 PF01842 ACT domain PACID_33420 PF02424 ApbE family PACID_33440 PF00206 Lyase PACID_33440 PF10415 Fumarase C C-terminus PACID_33460 PF01964 ThiC family PACID_33460 PF13667 ThiC-associated domain PACID_33470 PF05076 Suppressor of fused protein (SUFU) PACID_33480 PF13847 Methyltransferase domain PACID_33490 PF03051 Peptidase C1-like family PACID_33500 PF00005 ABC transporter PACID_33520 PF04185 Phosphoesterase family PACID_33530 PF07690 Major Facilitator Superfamily PACID_33550 PF00455 PACID_33550 PACID_33550 PF08220 DeoR-like helix-turn-helix domain PACID_33560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain PACID_33560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain PACID_33570 PF01545 Cation efflux family PACID_33580 PF00905 Penicillin binding protein transpeptidase domain PACID_33580 PF03717 Penicillin-binding Protein dimerisation domain PACID_33590 PF00924 Mechanosensitive ion channel PACID_33600 PF02595 Glycerate kinase family PACID_33620 PF01743 Poly A polymerase head domain PACID_33620 PF01966 HD domain PACID_33620 PF12627 Probable RNA and SrmB- binding site of polymerase A PACID_33630 PF00171 Aldehyde dehydrogenase family PACID_33640 PF01758 Sodium Bile acid symporter family PACID_33650 PF00107 Zinc-binding dehydrogenase PACID_33650 PF08240 Alcohol dehydrogenase GroES-like domain PACID_33660 PF13529 Peptidase_C39 like family PACID_33690 PF04542 Sigma-70 region 2 PACID_33690 PF08281 Sigma-70, region 4 PACID_33710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain PACID_33710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain PACID_33730 PF00230 Major intrinsic protein PACID_33740 PF04198 Putative sugar-binding domain PACID_33740 PF13518 Helix-turn-helix domain PACID_33760 PF13180 PDZ domain PACID_33760 PF13365 Trypsin-like peptidase domain PACID_33780 PF04616 Glycosyl hydrolases family 43 PACID_33790 PF00528 Binding-protein-dependent transport system inner membrane component PACID_33800 PF00528 Binding-protein-dependent transport system inner membrane component PACID_33810 PF13416 Bacterial extracellular solute-binding protein PACID_33830 PF06964 Alpha-L-arabinofuranosidase C-terminus PACID_33840 PF00356 Bacterial regulatory proteins, lacI family PACID_33840 PF13377 Periplasmic binding protein-like domain PACID_33850 PF07992 Pyridine nucleotide-disulphide oxidoreductase PACID_33860 PF01638 HxlR-like helix-turn-helix PACID_33870 PF13460 NADH(P)-binding PACID_33880 PF00849 RNA pseudouridylate synthase PACID_33890 PF00085 Thioredoxin PACID_33910 PF02566 OsmC-like protein PACID_33920 PF13086 AAA domain PACID_33920 PF13087 AAA domain PACID_33920 PF13195 PACID_33920 PACID_33950 PF00072 Response regulator receiver domain PACID_33950 PF00196 Bacterial regulatory proteins, luxR family PACID_33960 PF00923 Transaldolase PACID_33970 PF00107 Zinc-binding dehydrogenase PACID_33970 PF08240 Alcohol dehydrogenase GroES-like domain PACID_33980 PF01261 Xylose isomerase-like TIM barrel PACID_33990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_33990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_34000 PF00356 Bacterial regulatory proteins, lacI family PACID_34000 PF13377 Periplasmic binding protein-like domain PACID_34010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family PACID_34010 PF03466 LysR substrate binding domain PACID_34020 PF03601 PACID_34020 PACID_34040 PF01261 Xylose isomerase-like TIM barrel PACID_34050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_34060 PF01261 Xylose isomerase-like TIM barrel PACID_34070 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_34070 PF02894 Oxidoreductase family, C-terminal alpha/beta domain PACID_34080 PF00083 Sugar (and other) transporter PACID_34090 PF00083 Sugar (and other) transporter PACID_34100 PF00356 Bacterial regulatory proteins, lacI family PACID_34100 PF13377 Periplasmic binding protein-like domain PACID_34110 PF00083 Sugar (and other) transporter PACID_34120 PF00356 Bacterial regulatory proteins, lacI family PACID_34120 PF13377 Periplasmic binding protein-like domain PACID_34130 PF01261 Xylose isomerase-like TIM barrel PACID_34140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold PACID_34150 PF01261 Xylose isomerase-like TIM barrel PACID_34160 PF00171 Aldehyde dehydrogenase family PACID_34170 PF00392 Bacterial regulatory proteins, gntR family PACID_34170 PF07702 UTRA domain PACID_34190 PF00155 Aminotransferase class I and II PACID_34210 PF01820 D-ala D-ala ligase N-terminus PACID_34210 PF07478 D-ala D-ala ligase C-terminus PACID_34220 PF02104 PACID_34220 PACID_34230 PF12823 PACID_34230 PACID_34240 PF13298 DNA polymerase Ligase (LigD) PACID_34250 PF02195 ParB-like nuclease domain PACID_34260 PF13614 AAA domain PACID_34270 PF00872 PACID_34270 PACID_34280 PF02527 rRNA small subunit methyltransferase G PACID_34290 PF00893 Small Multidrug Resistance protein PACID_34300 PF01424 R3H domain PACID_34310 PF02096 60Kd inner membrane protein PACID_34320 PF01809 PACID_34320 PACID_34330 PF00825 Ribonuclease P