PACID_06390 600ce2dd71ce599a94f52877beb7c582 174 SUPERFAMILY SSF55144 4 131 7.85E-5 T 14-10-2018 IPR009097 Cyclic phosphodiesterase PACID_06390 600ce2dd71ce599a94f52877beb7c582 174 Gene3D G3DSA:3.90.1140.10 5 166 5.3E-7 T 14-10-2018 PACID_06390 600ce2dd71ce599a94f52877beb7c582 174 Pfam PF13563 2'-5' RNA ligase superfamily 20 154 8.7E-8 T 14-10-2018 PACID_13690 3602b945e805d73d708cd13ef136c10d 454 Pfam PF07929 Plasmid pRiA4b ORF-3-like protein 28 205 3.8E-51 T 14-10-2018 IPR012912 Plasmid pRiA4b, Orf3 PACID_13690 3602b945e805d73d708cd13ef136c10d 454 SUPERFAMILY SSF159941 27 208 2.09E-50 T 14-10-2018 IPR024047 MM3350-like superfamily PACID_13690 3602b945e805d73d708cd13ef136c10d 454 Gene3D G3DSA:3.10.290.30 24 209 8.6E-51 T 14-10-2018 IPR024047 MM3350-like superfamily PACID_33160 18fcbacfe71d8ffe0b528971b0d57de7 311 Pfam PF12146 Serine aminopeptidase, S33 28 292 9.8E-39 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 PACID_33160 18fcbacfe71d8ffe0b528971b0d57de7 311 SUPERFAMILY SSF53474 6 309 4.67E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_33160 18fcbacfe71d8ffe0b528971b0d57de7 311 Gene3D G3DSA:3.40.50.1820 1 310 8.0E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SUPERFAMILY SSF49299 968 1046 1.16E-15 T 14-10-2018 IPR035986 PKD domain superfamily PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SUPERFAMILY SSF49299 1266 1349 8.37E-20 T 14-10-2018 IPR035986 PKD domain superfamily PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SUPERFAMILY SSF49299 883 965 2.75E-19 T 14-10-2018 IPR035986 PKD domain superfamily PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Gene3D G3DSA:2.60.40.10 966 1050 4.0E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Gene3D G3DSA:2.60.40.10 1262 1349 3.0E-22 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Gene3D G3DSA:2.60.40.10 801 879 3.5E-16 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SMART SM00089 886 966 1.1E-14 T 14-10-2018 IPR022409 PKD/Chitinase domain PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SMART SM00089 1268 1349 5.9E-19 T 14-10-2018 IPR022409 PKD/Chitinase domain PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SMART SM00089 969 1049 6.3E-13 T 14-10-2018 IPR022409 PKD/Chitinase domain PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SMART SM00089 800 883 2.8E-10 T 14-10-2018 IPR022409 PKD/Chitinase domain PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SUPERFAMILY SSF50969 98 368 2.43E-8 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Gene3D G3DSA:2.60.40.10 880 965 1.7E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Gene3D G3DSA:2.60.120.200 619 800 1.5E-27 T 14-10-2018 PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SUPERFAMILY SSF49899 624 798 1.12E-26 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 SUPERFAMILY SSF49299 797 880 2.35E-15 T 14-10-2018 IPR035986 PKD domain superfamily PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Pfam PF00801 PKD domain 984 1038 3.1E-11 T 14-10-2018 IPR000601 PKD domain PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Pfam PF00801 PKD domain 896 955 2.4E-10 T 14-10-2018 IPR000601 PKD domain PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Pfam PF00801 PKD domain 1280 1337 2.5E-13 T 14-10-2018 IPR000601 PKD domain PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Pfam PF00801 PKD domain 808 870 1.5E-8 T 14-10-2018 IPR000601 PKD domain PACID_07910 fbd401458cd88db280d483dcb4e2de2c 1564 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 629 787 7.7E-19 T 14-10-2018 PACID_30010 fc08c26047e9c275304d3177f46cf03b 259 Pfam PF01614 Bacterial transcriptional regulator 128 248 2.0E-25 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal PACID_30010 fc08c26047e9c275304d3177f46cf03b 259 SUPERFAMILY SSF46785 8 79 1.31E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_30010 fc08c26047e9c275304d3177f46cf03b 259 SUPERFAMILY SSF55781 65 252 1.9E-38 T 14-10-2018 PACID_30010 fc08c26047e9c275304d3177f46cf03b 259 Gene3D G3DSA:3.30.450.40 84 254 1.7E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily PACID_30010 fc08c26047e9c275304d3177f46cf03b 259 Gene3D G3DSA:1.10.10.10 6 80 4.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_30010 fc08c26047e9c275304d3177f46cf03b 259 Pfam PF09339 IclR helix-turn-helix domain 9 57 1.5E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PACID_30010 fc08c26047e9c275304d3177f46cf03b 259 SMART SM00346 7 97 5.3E-6 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PACID_34250 b5454a741296ad0b5a23d8116e64167b 392 Pfam PF02195 ParB-like nuclease domain 128 215 1.5E-21 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PACID_34250 b5454a741296ad0b5a23d8116e64167b 392 Gene3D G3DSA:3.90.1530.30 139 201 6.2E-25 T 14-10-2018 PACID_34250 b5454a741296ad0b5a23d8116e64167b 392 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 125 301 2.0E-54 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 PACID_34250 b5454a741296ad0b5a23d8116e64167b 392 SUPERFAMILY SSF110849 123 219 1.05E-26 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily PACID_34250 b5454a741296ad0b5a23d8116e64167b 392 SMART SM00470 126 216 5.4E-31 T 14-10-2018 IPR003115 ParB/Sulfiredoxin PACID_34250 b5454a741296ad0b5a23d8116e64167b 392 Gene3D G3DSA:1.10.10.2830 203 317 1.8E-35 T 14-10-2018 PACID_34250 b5454a741296ad0b5a23d8116e64167b 392 SUPERFAMILY SSF109709 208 316 3.14E-33 T 14-10-2018 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 Pfam PF00083 Sugar (and other) transporter 234 545 2.8E-54 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 Pfam PF00083 Sugar (and other) transporter 36 191 6.3E-36 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 PRINTS PR00171 Sugar transporter signature 44 54 1.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 PRINTS PR00171 Sugar transporter signature 472 484 1.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 PRINTS PR00171 Sugar transporter signature 449 470 1.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 PRINTS PR00171 Sugar transporter signature 132 151 1.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 PRINTS PR00171 Sugar transporter signature 351 361 1.1E-14 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 ProSitePatterns PS00217 Sugar transport proteins signature 2. 137 162 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 ProSitePatterns PS00216 Sugar transport proteins signature 1. 95 112 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_09370 8062b8d5131a01566dcefd9d689a8184 554 SUPERFAMILY SSF103473 30 545 2.49E-58 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_00070 63e20a0485b43245b87a5af772f1a0e9 421 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 383 1.9E-108 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PACID_00070 63e20a0485b43245b87a5af772f1a0e9 421 ProSitePatterns PS00617 RecF protein signature 1. 120 140 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PACID_00070 63e20a0485b43245b87a5af772f1a0e9 421 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 368 1.5E-18 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal PACID_00070 63e20a0485b43245b87a5af772f1a0e9 421 ProSitePatterns PS00618 RecF protein signature 2. 336 354 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 PACID_00070 63e20a0485b43245b87a5af772f1a0e9 421 SUPERFAMILY SSF52540 1 361 4.13E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_00070 63e20a0485b43245b87a5af772f1a0e9 421 Gene3D G3DSA:3.40.50.300 6 368 6.0E-90 T 14-10-2018 PACID_00070 63e20a0485b43245b87a5af772f1a0e9 421 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 421 87.298 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 PACID_00070 63e20a0485b43245b87a5af772f1a0e9 421 Gene3D G3DSA:1.20.1050.90 123 335 6.0E-90 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 SUPERFAMILY SSF81653 249 341 1.12E-22 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 646 665 2.8E-24 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 669 681 2.8E-24 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 441 455 2.8E-24 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 593 603 2.8E-24 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 291 305 2.8E-24 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 SUPERFAMILY SSF81665 210 724 1.44E-13 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PACID_05130 f73bf5b2236b91186a08876c00415296 758 ProSitePatterns PS01047 Heavy-metal-associated domain. 24 52 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PACID_05130 f73bf5b2236b91186a08876c00415296 758 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 443 449 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00943 Copper-transporting ATPase signature 623 640 9.0E-11 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00943 Copper-transporting ATPase signature 210 229 9.0E-11 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00943 Copper-transporting ATPase signature 424 439 9.0E-11 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 PRINTS PR00943 Copper-transporting ATPase signature 364 378 9.0E-11 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 214 729 2.3E-87 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_05130 f73bf5b2236b91186a08876c00415296 758 Gene3D G3DSA:3.40.1110.10 452 578 1.6E-87 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PACID_05130 f73bf5b2236b91186a08876c00415296 758 ProSitePatterns PS01229 Hypothetical cof family signature 2. 646 668 - T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 SUPERFAMILY SSF55008 16 87 5.37E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PACID_05130 f73bf5b2236b91186a08876c00415296 758 Gene3D G3DSA:3.30.70.100 15 83 6.3E-16 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 Pfam PF00403 Heavy-metal-associated domain 22 79 9.8E-8 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PACID_05130 f73bf5b2236b91186a08876c00415296 758 Gene3D G3DSA:2.70.150.20 234 346 1.6E-34 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 204 748 8.6E-152 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 Gene3D G3DSA:3.40.50.1000 422 698 1.6E-87 T 14-10-2018 IPR023214 HAD superfamily PACID_05130 f73bf5b2236b91186a08876c00415296 758 Pfam PF00122 E1-E2 ATPase 243 420 1.8E-51 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 SUPERFAMILY SSF56784 439 746 3.04E-53 T 14-10-2018 IPR036412 HAD-like superfamily PACID_05130 f73bf5b2236b91186a08876c00415296 758 Pfam PF00702 haloacid dehalogenase-like hydrolase 437 660 3.7E-50 T 14-10-2018 PACID_05130 f73bf5b2236b91186a08876c00415296 758 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 159 748 5.4E-177 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PACID_28510 7f590d400be88cb41cc6d2839a8bc1fe 329 Gene3D G3DSA:3.40.50.620 11 213 6.6E-53 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_28510 7f590d400be88cb41cc6d2839a8bc1fe 329 SUPERFAMILY SSF52402 19 237 2.28E-42 T 14-10-2018 PACID_28510 7f590d400be88cb41cc6d2839a8bc1fe 329 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 17 317 18.484 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PACID_28510 7f590d400be88cb41cc6d2839a8bc1fe 329 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 27 208 2.1E-35 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PACID_28510 7f590d400be88cb41cc6d2839a8bc1fe 329 Pfam PF09179 TilS substrate binding domain 259 316 1.9E-6 T 14-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 PACID_28510 7f590d400be88cb41cc6d2839a8bc1fe 329 Pfam PF01171 PP-loop family 27 205 6.1E-30 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 PACID_28510 7f590d400be88cb41cc6d2839a8bc1fe 329 SUPERFAMILY SSF82829 216 317 1.94E-13 T 14-10-2018 PACID_28510 7f590d400be88cb41cc6d2839a8bc1fe 329 Gene3D G3DSA:1.20.59.20 217 326 2.3E-5 T 14-10-2018 PACID_00770 1da2582f4f61274b5b053fe6f22461bc 101 SUPERFAMILY SSF47413 32 91 6.91E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_00770 1da2582f4f61274b5b053fe6f22461bc 101 SMART SM00530 34 90 5.0E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_00770 1da2582f4f61274b5b053fe6f22461bc 101 Pfam PF01381 Helix-turn-helix 35 86 4.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_00770 1da2582f4f61274b5b053fe6f22461bc 101 Gene3D G3DSA:1.10.260.40 14 92 2.9E-16 T 14-10-2018 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 SUPERFAMILY SSF51182 1 380 3.78E-67 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PIRSF PIRSF001480 1 389 4.7E-75 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 Gene3D G3DSA:2.60.120.10 301 380 3.0E-98 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_09040 130fe9cff4b585d14de50db9790b504f 393 Pfam PF01238 Phosphomannose isomerase type I 2 350 1.0E-40 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 Gene3D G3DSA:1.10.441.10 142 300 3.0E-98 T 14-10-2018 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 385 1.0E-50 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 1.4E-46 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PRINTS PR00714 Phosphomannose isomerase type I signature 75 96 1.4E-46 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 1.4E-46 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PRINTS PR00714 Phosphomannose isomerase type I signature 118 141 1.4E-46 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 1.4E-46 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PRINTS PR00714 Phosphomannose isomerase type I signature 31 46 1.4E-46 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 1.4E-46 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 1.4E-46 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_09040 130fe9cff4b585d14de50db9790b504f 393 Gene3D G3DSA:2.60.120.10 7 275 3.0E-98 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 Gene3D G3DSA:3.30.70.2010 7 110 3.0E-33 T 14-10-2018 PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 232 265 1.1E-14 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 TIGRFAM TIGR03535 DapD_actino: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 12 318 2.5E-149 T 14-10-2018 IPR019875 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, actinobacteria KEGG: 00300+2.3.1.117 PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 Pfam PF14790 Tetrahydrodipicolinate N-succinyltransferase N-terminal 62 108 1.1E-5 T 14-10-2018 PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 11 316 43.078 T 14-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 Gene3D G3DSA:3.30.60.70 111 151 3.3E-13 T 14-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 SUPERFAMILY SSF51161 78 297 4.99E-36 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 111 151 6.0E-18 T 14-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 PACID_11640 16231b61f46a0a4dca45ed89f2ee219c 318 Gene3D G3DSA:2.160.10.10 152 318 1.0E-66 T 14-10-2018 PACID_14540 b28721a5a141e2d5f2f0617dabbdcafb 181 SUPERFAMILY SSF53041 2 136 5.62E-41 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PACID_14540 b28721a5a141e2d5f2f0617dabbdcafb 181 SMART SM00857 3 137 3.9E-53 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PACID_14540 b28721a5a141e2d5f2f0617dabbdcafb 181 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PACID_14540 b28721a5a141e2d5f2f0617dabbdcafb 181 Gene3D G3DSA:3.40.50.1390 3 125 2.6E-43 T 14-10-2018 PACID_14540 b28721a5a141e2d5f2f0617dabbdcafb 181 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PACID_14540 b28721a5a141e2d5f2f0617dabbdcafb 181 Pfam PF00239 Resolvase, N terminal domain 5 136 2.2E-43 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PACID_14540 b28721a5a141e2d5f2f0617dabbdcafb 181 SUPERFAMILY SSF46689 139 179 6.09E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_14540 b28721a5a141e2d5f2f0617dabbdcafb 181 Pfam PF02796 Helix-turn-helix domain of resolvase 139 180 4.5E-7 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 PACID_18960 3f47b194e7603cf2bbd1c647d7affdcf 214 SUPERFAMILY SSF109854 8 114 8.79E-6 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_18960 3f47b194e7603cf2bbd1c647d7affdcf 214 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 4 189 7.6E-25 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type PACID_18960 3f47b194e7603cf2bbd1c647d7affdcf 214 TIGRFAM TIGR03085 TIGR03085: TIGR03085 family protein 5 207 7.9E-63 T 14-10-2018 IPR017519 Conserved hypothetical protein CHP03085 PACID_10350 c78bf95a75513b360b31f246e0ba2e34 209 SUPERFAMILY SSF55068 14 206 3.66E-69 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PACID_10350 c78bf95a75513b360b31f246e0ba2e34 209 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 43 198 1.1E-55 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PACID_10350 c78bf95a75513b360b31f246e0ba2e34 209 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 41 204 35.122 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PACID_10350 c78bf95a75513b360b31f246e0ba2e34 209 Pfam PF01625 Peptide methionine sulfoxide reductase 43 198 9.4E-60 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PACID_10350 c78bf95a75513b360b31f246e0ba2e34 209 Gene3D G3DSA:3.30.1060.10 2 209 1.1E-76 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 Gene3D G3DSA:1.10.730.10 28 803 6.4E-191 T 14-10-2018 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 Gene3D G3DSA:3.90.740.10 214 391 6.4E-191 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 SUPERFAMILY SSF50677 232 379 1.11E-33 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 PRINTS PR00986 Valyl-tRNA synthetase signature 57 68 7.4E-19 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 PRINTS PR00986 Valyl-tRNA synthetase signature 546 564 7.4E-19 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 PRINTS PR00986 Valyl-tRNA synthetase signature 269 286 7.4E-19 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 PRINTS PR00986 Valyl-tRNA synthetase signature 395 408 7.4E-19 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 PRINTS PR00986 Valyl-tRNA synthetase signature 515 536 7.4E-19 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 Gene3D G3DSA:3.40.50.620 40 595 6.4E-191 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_22710 170516edeb8cee7def0effd140a2d76e 869 Pfam PF08264 Anticodon-binding domain of tRNA 672 813 3.2E-27 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 Hamap MF_02005 Valine--tRNA ligase [valS]. 20 848 27.879 T 14-10-2018 IPR022874 Valine-tRNA ligase, type 2 GO:0004832 KEGG: 00970+6.1.1.9 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 SUPERFAMILY SSF47323 646 849 9.53E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 SUPERFAMILY SSF52374 23 637 8.97E-105 T 14-10-2018 PACID_22710 170516edeb8cee7def0effd140a2d76e 869 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 35 629 2.3E-93 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_14780 669cc78b745eda324b6e67123bd83d86 353 Gene3D G3DSA:3.90.1720.10 230 343 1.3E-23 T 14-10-2018 PACID_14780 669cc78b745eda324b6e67123bd83d86 353 SUPERFAMILY SSF54001 231 329 1.18E-9 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PACID_14780 669cc78b745eda324b6e67123bd83d86 353 Pfam PF01464 Transglycosylase SLT domain 53 170 1.1E-4 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 PACID_14780 669cc78b745eda324b6e67123bd83d86 353 Pfam PF05257 CHAP domain 233 321 1.7E-12 T 14-10-2018 IPR007921 CHAP domain PACID_14780 669cc78b745eda324b6e67123bd83d86 353 SUPERFAMILY SSF53955 45 171 6.49E-10 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PACID_14780 669cc78b745eda324b6e67123bd83d86 353 Gene3D G3DSA:1.10.530.10 44 201 2.4E-9 T 14-10-2018 PACID_26220 404d6749bd103b7ad1151621c4b55266 331 SUPERFAMILY SSF53822 41 325 1.05E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_26220 404d6749bd103b7ad1151621c4b55266 331 Pfam PF13407 Periplasmic binding protein domain 46 305 4.1E-48 T 14-10-2018 IPR025997 Periplasmic binding protein PACID_26220 404d6749bd103b7ad1151621c4b55266 331 Gene3D G3DSA:3.40.50.2300 148 286 7.5E-70 T 14-10-2018 PACID_26220 404d6749bd103b7ad1151621c4b55266 331 Gene3D G3DSA:3.40.50.2300 46 303 7.5E-70 T 14-10-2018 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 SMART SM00388 286 353 7.6E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 Pfam PF00672 HAMP domain 219 274 7.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 SUPERFAMILY SSF55874 342 520 3.39E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 461 8.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 447 8.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 487 8.8E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 397 521 1.0E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 SMART SM00387 396 522 4.0E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 Gene3D G3DSA:3.30.565.10 356 525 1.1E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 SUPERFAMILY SSF47384 273 353 1.16E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 Gene3D G3DSA:1.10.287.130 220 354 2.2E-25 T 14-10-2018 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 Pfam PF00512 His Kinase A (phospho-acceptor) domain 288 352 1.6E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_07050 79180f85983955b09e9693e5d2ebbe95 528 SMART SM00304 216 278 4.2E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 56 87 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 TIGRFAM TIGR02947 SigH_actino: RNA polymerase sigma-70 factor, TIGR02947 family 20 210 5.0E-107 T 14-10-2018 IPR014293 RNA polymerase sigma-70, actinobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 Pfam PF08281 Sigma-70, region 4 142 193 4.6E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 197 1.6E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 Gene3D G3DSA:1.10.10.10 134 200 5.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 Pfam PF04542 Sigma-70 region 2 37 102 8.0E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 Gene3D G3DSA:1.10.1740.10 18 104 6.1E-35 T 14-10-2018 PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 SUPERFAMILY SSF88946 28 115 6.54E-25 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PACID_19830 05af609fc197f2180799354c3cc4e3a5 224 SUPERFAMILY SSF88659 140 196 2.07E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_20910 bd2c4ee7511806724e81ef998b871f1d 332 Pfam PF13344 Haloacid dehalogenase-like hydrolase 13 112 7.6E-24 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_20910 bd2c4ee7511806724e81ef998b871f1d 332 SUPERFAMILY SSF56784 9 262 1.81E-60 T 14-10-2018 IPR036412 HAD-like superfamily PACID_20910 bd2c4ee7511806724e81ef998b871f1d 332 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 13 235 3.8E-37 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_20910 bd2c4ee7511806724e81ef998b871f1d 332 Gene3D G3DSA:3.40.50.1000 77 188 3.8E-75 T 14-10-2018 IPR023214 HAD superfamily PACID_20910 bd2c4ee7511806724e81ef998b871f1d 332 Gene3D G3DSA:3.40.50.1000 10 238 3.8E-75 T 14-10-2018 IPR023214 HAD superfamily PACID_20910 bd2c4ee7511806724e81ef998b871f1d 332 PIRSF PIRSF000915 1 266 7.0E-56 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_20910 bd2c4ee7511806724e81ef998b871f1d 332 Pfam PF13242 HAD-hyrolase-like 188 259 5.9E-18 T 14-10-2018 PACID_02590 48a34e30980ff9f8e6d983d36bc49178 179 Gene3D G3DSA:3.40.980.10 18 179 5.9E-41 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PACID_02590 48a34e30980ff9f8e6d983d36bc49178 179 SMART SM00852 25 172 2.2E-14 T 14-10-2018 IPR001453 MoaB/Mog domain PACID_02590 48a34e30980ff9f8e6d983d36bc49178 179 Pfam PF00994 Probable molybdopterin binding domain 26 171 6.6E-26 T 14-10-2018 IPR001453 MoaB/Mog domain PACID_02590 48a34e30980ff9f8e6d983d36bc49178 179 SUPERFAMILY SSF53218 24 176 1.44E-32 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PACID_13210 62d29175f58fccc001ada6af2949a60f 259 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 7 247 4.1E-54 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13210 62d29175f58fccc001ada6af2949a60f 259 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 3 256 58.176 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13210 62d29175f58fccc001ada6af2949a60f 259 Gene3D G3DSA:3.20.20.70 1 259 3.8E-99 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_13210 62d29175f58fccc001ada6af2949a60f 259 Pfam PF00121 Triosephosphate isomerase 6 253 1.3E-85 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13210 62d29175f58fccc001ada6af2949a60f 259 SUPERFAMILY SSF51351 1 257 1.83E-88 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13210 62d29175f58fccc001ada6af2949a60f 259 ProSitePatterns PS00171 Triosephosphate isomerase active site. 172 182 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_32670 02c588db0dd31075d8a634b738856149 254 Gene3D G3DSA:3.40.50.300 19 244 4.4E-51 T 14-10-2018 PACID_32670 02c588db0dd31075d8a634b738856149 254 SUPERFAMILY SSF52540 20 231 2.9E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_32670 02c588db0dd31075d8a634b738856149 254 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_32670 02c588db0dd31075d8a634b738856149 254 SMART SM00382 45 237 1.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_32670 02c588db0dd31075d8a634b738856149 254 Pfam PF00005 ABC transporter 38 190 8.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 261 424 2.6E-25 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 217 4.7E-8 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 PIRSF PIRSF003095 3 445 1.9E-107 T 14-10-2018 IPR005215 Trigger factor GO:0015031 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 SUPERFAMILY SSF109998 248 438 3.14E-32 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 Gene3D G3DSA:1.10.3120.10 120 429 1.4E-60 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 Gene3D G3DSA:3.30.70.1050 2 119 1.5E-31 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 Gene3D G3DSA:3.10.50.40 154 246 1.4E-60 T 14-10-2018 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 TIGRFAM TIGR00115 tig: trigger factor 12 423 6.5E-116 T 14-10-2018 IPR005215 Trigger factor GO:0015031 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 SUPERFAMILY SSF54534 136 246 4.12E-19 T 14-10-2018 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 SUPERFAMILY SSF102735 4 135 6.15E-35 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 Hamap MF_00303 Trigger factor [tig]. 1 430 18.054 T 14-10-2018 IPR005215 Trigger factor GO:0015031 PACID_22800 2d9e3a69eed7f3fa4b4145cc381a9ab3 477 Pfam PF05697 Bacterial trigger factor protein (TF) 4 147 6.3E-42 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 PACID_07740 64bf1275213de0487bfbdbfdf5c46b47 507 SUPERFAMILY SSF53720 3 486 8.9E-159 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_07740 64bf1275213de0487bfbdbfdf5c46b47 507 Gene3D G3DSA:3.40.605.10 10 475 3.1E-176 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_07740 64bf1275213de0487bfbdbfdf5c46b47 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PACID_07740 64bf1275213de0487bfbdbfdf5c46b47 507 Pfam PF00171 Aldehyde dehydrogenase family 10 481 1.8E-161 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_07740 64bf1275213de0487bfbdbfdf5c46b47 507 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PACID_07740 64bf1275213de0487bfbdbfdf5c46b47 507 Gene3D G3DSA:3.40.309.10 252 451 3.1E-176 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 SUPERFAMILY SSF52540 2 426 1.49E-169 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 194.704 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 Gene3D G3DSA:1.10.300.10 106 205 1.0E-96 T 14-10-2018 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 Pfam PF00709 Adenylosuccinate synthetase 4 420 4.0E-175 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 Gene3D G3DSA:3.90.170.10 265 428 5.2E-67 T 14-10-2018 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 9.9E-162 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 SMART SM00788 3 422 2.2E-276 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_27370 d6a0bb03ac80c433e338d1306acb7fd3 428 Gene3D G3DSA:3.40.440.10 5 257 1.0E-96 T 14-10-2018 PACID_30980 d232080158002e7fab33f2edc83395dc 326 Gene3D G3DSA:1.10.3720.10 75 325 2.9E-54 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30980 d232080158002e7fab33f2edc83395dc 326 SUPERFAMILY SSF161098 79 313 4.84E-50 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30980 d232080158002e7fab33f2edc83395dc 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 317 5.1E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_03620 63702e45a8315ece5d188bc5a8f765b8 409 Gene3D G3DSA:1.20.1250.20 14 197 1.2E-14 T 14-10-2018 PACID_03620 63702e45a8315ece5d188bc5a8f765b8 409 Pfam PF07690 Major Facilitator Superfamily 22 331 1.3E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_03620 63702e45a8315ece5d188bc5a8f765b8 409 SUPERFAMILY SSF103473 10 388 1.7E-42 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_03620 63702e45a8315ece5d188bc5a8f765b8 409 Gene3D G3DSA:1.20.1250.20 205 390 1.3E-20 T 14-10-2018 PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 Pfam PF13604 AAA domain 184 389 1.8E-35 T 14-10-2018 PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 SUPERFAMILY SSF52540 128 365 2.02E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 SMART SM00382 197 390 7.8E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 16 605 9.5E-113 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 Gene3D G3DSA:3.40.50.300 138 367 5.6E-52 T 14-10-2018 PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 Pfam PF13538 UvrD-like helicase C-terminal domain 539 584 7.4E-14 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 21 606 44.786 T 14-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 SUPERFAMILY SSF52540 311 608 4.78E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 Gene3D G3DSA:3.40.50.300 482 597 2.0E-22 T 14-10-2018 PACID_20070 f2d99bc9900762456fc9368eb02f13e2 642 Gene3D G3DSA:3.40.50.300 368 476 4.8E-13 T 14-10-2018 PACID_19300 a68cb1207bf619b033d2b6ec85d7e0b8 274 Gene3D G3DSA:3.40.50.1820 15 272 3.6E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_19300 a68cb1207bf619b033d2b6ec85d7e0b8 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 5.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_19300 a68cb1207bf619b033d2b6ec85d7e0b8 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 48 63 5.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_19300 a68cb1207bf619b033d2b6ec85d7e0b8 274 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 5.2E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_19300 a68cb1207bf619b033d2b6ec85d7e0b8 274 SUPERFAMILY SSF53474 2 272 6.43E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_19300 a68cb1207bf619b033d2b6ec85d7e0b8 274 Pfam PF00561 alpha/beta hydrolase fold 20 258 1.4E-19 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 SUPERFAMILY SSF52833 3 105 7.85E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 PRINTS PR00421 Thioredoxin family signature 69 80 1.8E-7 T 14-10-2018 PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 PRINTS PR00421 Thioredoxin family signature 29 38 1.8E-7 T 14-10-2018 PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 PRINTS PR00421 Thioredoxin family signature 21 29 1.8E-7 T 14-10-2018 PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 Pfam PF00085 Thioredoxin 4 101 2.2E-31 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 TIGRFAM TIGR01068 thioredoxin: thioredoxin 6 103 5.1E-37 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 Gene3D G3DSA:3.40.30.10 1 104 1.3E-36 T 14-10-2018 PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 ProSitePatterns PS00194 Thioredoxin family active site. 22 40 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PACID_05080 b3d84c99ed9696e465b311f2f2e25545 105 PIRSF PIRSF000077 1 105 1.1E-40 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PACID_24730 966d4a6d28c2bb941272d0815ca94fd6 842 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 48 840 1.8E-282 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 PACID_24730 966d4a6d28c2bb941272d0815ca94fd6 842 SUPERFAMILY SSF52540 46 732 6.82E-170 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_24730 966d4a6d28c2bb941272d0815ca94fd6 842 Gene3D G3DSA:3.40.50.300 355 725 1.8E-118 T 14-10-2018 PACID_24730 966d4a6d28c2bb941272d0815ca94fd6 842 Gene3D G3DSA:1.10.486.10 458 641 1.8E-118 T 14-10-2018 PACID_24730 966d4a6d28c2bb941272d0815ca94fd6 842 Pfam PF13361 UvrD-like helicase C-terminal domain 352 705 8.0E-63 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_24730 966d4a6d28c2bb941272d0815ca94fd6 842 Pfam PF00580 UvrD/REP helicase N-terminal domain 53 346 6.2E-74 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PACID_03430 9edaed871fe5551a110831715443732c 437 Pfam PF07687 Peptidase dimerisation domain 182 330 2.2E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_03430 9edaed871fe5551a110831715443732c 437 Pfam PF01546 Peptidase family M20/M25/M40 75 431 1.1E-25 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PACID_03430 9edaed871fe5551a110831715443732c 437 SUPERFAMILY SSF53187 4 434 3.28E-54 T 14-10-2018 PACID_03430 9edaed871fe5551a110831715443732c 437 Gene3D G3DSA:3.40.630.10 11 422 4.2E-107 T 14-10-2018 PACID_03430 9edaed871fe5551a110831715443732c 437 Gene3D G3DSA:3.30.70.360 190 352 4.2E-107 T 14-10-2018 PACID_16020 3a0bb2209e021c731e85dfff2fb8ea74 193 SUPERFAMILY SSF51283 3 187 8.77E-54 T 14-10-2018 IPR036157 dUTPase-like superfamily PACID_16020 3a0bb2209e021c731e85dfff2fb8ea74 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 4 183 1.2E-62 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 PACID_16020 3a0bb2209e021c731e85dfff2fb8ea74 193 Gene3D G3DSA:2.70.40.10 3 189 2.0E-59 T 14-10-2018 IPR036157 dUTPase-like superfamily PACID_16020 3a0bb2209e021c731e85dfff2fb8ea74 193 Hamap MF_00146 dCTP deaminase [dcd]. 2 184 32.918 T 14-10-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 PACID_16020 3a0bb2209e021c731e85dfff2fb8ea74 193 Pfam PF00692 dUTPase 71 179 1.3E-11 T 14-10-2018 IPR029054 dUTPase-like PACID_03250 a0c22ca37528dec589699ded7cdd492e 967 SMART SM00487 106 310 2.0E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_03250 a0c22ca37528dec589699ded7cdd492e 967 SUPERFAMILY SSF52540 232 596 5.52E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03250 a0c22ca37528dec589699ded7cdd492e 967 Pfam PF00271 Helicase conserved C-terminal domain 432 549 1.2E-14 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_03250 a0c22ca37528dec589699ded7cdd492e 967 Gene3D G3DSA:3.40.50.300 387 573 9.1E-36 T 14-10-2018 PACID_03250 a0c22ca37528dec589699ded7cdd492e 967 Gene3D G3DSA:3.40.50.10810 108 353 4.2E-56 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PACID_03250 a0c22ca37528dec589699ded7cdd492e 967 SUPERFAMILY SSF52540 78 302 7.32E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03250 a0c22ca37528dec589699ded7cdd492e 967 SMART SM00490 465 549 1.0E-12 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_03250 a0c22ca37528dec589699ded7cdd492e 967 Pfam PF00176 SNF2 family N-terminal domain 132 291 2.2E-13 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 PACID_09560 e7f7a4062c3e7099e4123b38dc891817 214 Gene3D G3DSA:3.40.630.30 4 214 7.1E-51 T 14-10-2018 PACID_09560 e7f7a4062c3e7099e4123b38dc891817 214 Pfam PF13302 Acetyltransferase (GNAT) domain 20 165 3.3E-13 T 14-10-2018 IPR000182 GNAT domain PACID_09560 e7f7a4062c3e7099e4123b38dc891817 214 SUPERFAMILY SSF55729 13 173 1.78E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_31060 f9ca03e30112209164255163374f030e 267 Gene3D G3DSA:3.40.630.70 62 236 2.9E-51 T 14-10-2018 PACID_31060 f9ca03e30112209164255163374f030e 267 SUPERFAMILY SSF55729 7 224 1.91E-57 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_31060 f9ca03e30112209164255163374f030e 267 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 31 217 4.0E-45 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PACID_31060 f9ca03e30112209164255163374f030e 267 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 267 61.536 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PACID_31060 f9ca03e30112209164255163374f030e 267 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 28 205 2.0E-53 T 14-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 Gene3D G3DSA:3.30.300.10 397 517 3.4E-51 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 167 180 1.9E-7 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.9E-7 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.9E-7 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.1E-6 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00097 Anthranilate synthase component II signature 167 180 2.1E-6 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.1E-6 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 Gene3D G3DSA:3.40.50.880 5 199 6.3E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 Pfam PF00117 Glutamine amidotransferase class-I 10 190 7.5E-38 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 Pfam PF00958 GMP synthase C terminal domain 424 516 3.1E-36 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 Gene3D G3DSA:3.40.50.620 200 396 2.3E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 5 517 53.256 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 SUPERFAMILY SSF54810 396 517 7.98E-46 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 8 194 7.4E-72 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 SUPERFAMILY SSF52317 3 227 2.07E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 SUPERFAMILY SSF52402 183 437 1.98E-56 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 517 1.6E-144 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 8 22 4.5E-6 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 4.5E-6 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 4.5E-6 T 14-10-2018 PACID_24860 9b78b45ae9a8dd1c69042e7ea602ed93 517 Pfam PF02540 NAD synthase 214 244 6.2E-6 T 14-10-2018 IPR022310 NAD/GMP synthase PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Gene3D G3DSA:3.40.50.300 158 348 3.5E-73 T 14-10-2018 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Gene3D G3DSA:1.10.1780.10 3 150 1.0E-25 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 SMART SM00382 198 344 1.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_07360 229136c0c8993fea177b851eb45ef50f 865 SMART SM00382 598 745 4.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_07360 229136c0c8993fea177b851eb45ef50f 865 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 632 650 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 SUPERFAMILY SSF81923 4 155 8.5E-29 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Gene3D G3DSA:3.40.50.300 349 545 1.2E-70 T 14-10-2018 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 5 850 0.0 T 14-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 SUPERFAMILY SSF52540 547 841 1.66E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 65 1.1E-4 T 14-10-2018 IPR004176 Clp, N-terminal PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 1.1E-8 T 14-10-2018 IPR004176 Clp, N-terminal PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 765 844 7.8E-27 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PACID_07360 229136c0c8993fea177b851eb45ef50f 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 709 723 9.2E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 647 665 9.2E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 602 620 9.2E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 676 694 9.2E-42 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Pfam PF07724 AAA domain (Cdc48 subfamily) 597 759 1.8E-55 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 336 1.1E-13 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Gene3D G3DSA:3.40.50.300 551 764 1.9E-87 T 14-10-2018 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 SUPERFAMILY SSF52540 160 546 2.49E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07360 229136c0c8993fea177b851eb45ef50f 865 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 Gene3D G3DSA:1.10.8.60 765 861 3.8E-29 T 14-10-2018 PACID_07360 229136c0c8993fea177b851eb45ef50f 865 SMART SM01086 765 856 1.3E-33 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PACID_16750 29e7171737d47f0d65038ea6359518eb 459 SUPERFAMILY SSF56281 5 458 1.23E-113 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_16750 29e7171737d47f0d65038ea6359518eb 459 Pfam PF00753 Metallo-beta-lactamase superfamily 21 198 2.6E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_16750 29e7171737d47f0d65038ea6359518eb 459 SMART SM01027 253 373 2.7E-42 T 14-10-2018 IPR022712 Beta-Casp domain PACID_16750 29e7171737d47f0d65038ea6359518eb 459 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 388 450 1.8E-13 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain PACID_16750 29e7171737d47f0d65038ea6359518eb 459 Gene3D G3DSA:3.60.15.10 10 434 1.0E-123 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_16750 29e7171737d47f0d65038ea6359518eb 459 Pfam PF10996 Beta-Casp domain 256 373 3.7E-24 T 14-10-2018 IPR022712 Beta-Casp domain PACID_16750 29e7171737d47f0d65038ea6359518eb 459 SMART SM00849 17 226 1.7E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_16750 29e7171737d47f0d65038ea6359518eb 459 Gene3D G3DSA:3.40.50.10890 222 399 1.0E-123 T 14-10-2018 PACID_32300 b30d8b67431aa8f7f9de80299b493f02 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 8 252 8.4E-38 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PACID_32300 b30d8b67431aa8f7f9de80299b493f02 273 Gene3D G3DSA:1.10.8.100 133 250 6.6E-44 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 PACID_32300 b30d8b67431aa8f7f9de80299b493f02 273 SUPERFAMILY SSF53335 8 252 4.8E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_32300 b30d8b67431aa8f7f9de80299b493f02 273 Gene3D G3DSA:3.40.50.150 13 180 6.6E-44 T 14-10-2018 PACID_32300 b30d8b67431aa8f7f9de80299b493f02 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 36 63 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PACID_32300 b30d8b67431aa8f7f9de80299b493f02 273 SMART SM00650 21 180 2.9E-56 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PACID_02170 7e899ba1146b6394e84a9fb2898c711b 130 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 7 83 1.9E-10 T 14-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 PACID_22560 2a4c4bbb65e409cebb5dd4b95e8d5381 507 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 291 493 9.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_22560 2a4c4bbb65e409cebb5dd4b95e8d5381 507 SUPERFAMILY SSF160964 1 254 7.45E-49 T 14-10-2018 PACID_22560 2a4c4bbb65e409cebb5dd4b95e8d5381 507 Gene3D G3DSA:1.10.3720.10 265 503 3.1E-65 T 14-10-2018 IPR035906 MetI-like superfamily PACID_22560 2a4c4bbb65e409cebb5dd4b95e8d5381 507 Pfam PF16296 N-terminal of TM subunit in PBP-dependent ABC transporters 62 143 4.1E-29 T 14-10-2018 IPR032550 PBP-dependent ABC transporters TM subunit, N-terminal PACID_22560 2a4c4bbb65e409cebb5dd4b95e8d5381 507 SUPERFAMILY SSF161098 255 495 4.97E-55 T 14-10-2018 IPR035906 MetI-like superfamily PACID_33960 9e7c4f1b75d1e184d444695046f096f4 368 SUPERFAMILY SSF51569 4 362 8.06E-74 T 14-10-2018 PACID_33960 9e7c4f1b75d1e184d444695046f096f4 368 ProSitePatterns PS01054 Transaldolase signature 1. 41 49 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PACID_33960 9e7c4f1b75d1e184d444695046f096f4 368 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 15 359 1.2E-76 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PACID_33960 9e7c4f1b75d1e184d444695046f096f4 368 Gene3D G3DSA:3.20.20.70 3 364 1.8E-150 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_33960 9e7c4f1b75d1e184d444695046f096f4 368 TIGRFAM TIGR00876 tal_mycobact: transaldolase 11 356 8.0E-130 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PACID_33960 9e7c4f1b75d1e184d444695046f096f4 368 Hamap MF_00493 Transaldolase [tal]. 1 368 151.195 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PACID_33960 9e7c4f1b75d1e184d444695046f096f4 368 PIRSF PIRSF036915 1 368 1.0E-162 T 14-10-2018 IPR004732 Transaldolase type 2 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 PACID_29000 f060ff4c7261283f72538d551692e6e7 290 Gene3D G3DSA:3.30.470.10 11 122 2.4E-20 T 14-10-2018 PACID_29000 f060ff4c7261283f72538d551692e6e7 290 SUPERFAMILY SSF56752 22 285 7.72E-41 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PACID_29000 f060ff4c7261283f72538d551692e6e7 290 Pfam PF01063 Amino-transferase class IV 53 265 9.0E-29 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PACID_29000 f060ff4c7261283f72538d551692e6e7 290 Gene3D G3DSA:3.20.10.10 126 288 2.9E-42 T 14-10-2018 PACID_25410 695a6568cf81e8314e53b59981614f1f 300 Pfam PF04480 Protein of unknown function (DUF559) 178 277 2.3E-8 T 14-10-2018 IPR007569 Protein of unknown function DUF559 PACID_25410 695a6568cf81e8314e53b59981614f1f 300 SUPERFAMILY SSF52980 175 278 4.13E-11 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_25410 695a6568cf81e8314e53b59981614f1f 300 Gene3D G3DSA:3.40.960.10 182 280 1.3E-14 T 14-10-2018 PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 Gene3D G3DSA:2.40.40.10 273 363 4.7E-33 T 14-10-2018 IPR036908 RlpA-like domain superfamily PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 Gene3D G3DSA:2.30.30.40 37 94 2.6E-15 T 14-10-2018 PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 10 362 19.947 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 Pfam PF08239 Bacterial SH3 domain 43 93 2.6E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 Pfam PF08239 Bacterial SH3 domain 116 167 8.6E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 SUPERFAMILY SSF50685 267 362 2.89E-15 T 14-10-2018 IPR036908 RlpA-like domain superfamily PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 Pfam PF03330 Lytic transglycolase 276 359 2.1E-25 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 SMART SM00287 33 97 1.7E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 SMART SM00287 106 169 2.2E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 276 362 2.3E-31 T 14-10-2018 IPR012997 Rare lipoprotein A PACID_33260 dc97e51b0747511927a4989e5ca711a6 363 Gene3D G3DSA:2.30.30.40 107 172 9.0E-15 T 14-10-2018 PACID_08140 5f30bd32d4a4257c4b358c349e4578da 97 Gene3D G3DSA:3.40.50.2300 3 97 2.1E-25 T 14-10-2018 PACID_08140 5f30bd32d4a4257c4b358c349e4578da 97 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 87 4.0E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PACID_08140 5f30bd32d4a4257c4b358c349e4578da 97 SUPERFAMILY SSF52794 4 95 3.71E-17 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 PACID_06100 164c3c878702c066222694b67c04048b 259 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_06100 164c3c878702c066222694b67c04048b 259 SUPERFAMILY SSF52540 19 242 2.93E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06100 164c3c878702c066222694b67c04048b 259 SMART SM00382 48 235 7.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_06100 164c3c878702c066222694b67c04048b 259 Gene3D G3DSA:3.40.50.300 17 254 1.1E-66 T 14-10-2018 PACID_06100 164c3c878702c066222694b67c04048b 259 Pfam PF00005 ABC transporter 40 187 7.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_12770 43eb4df6a9a24cb932a35c850200be58 329 SUPERFAMILY SSF81799 128 230 1.83E-32 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 PACID_12770 43eb4df6a9a24cb932a35c850200be58 329 Pfam PF01795 MraW methylase family 16 324 2.1E-105 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PACID_12770 43eb4df6a9a24cb932a35c850200be58 329 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 15 324 1.1E-87 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PACID_12770 43eb4df6a9a24cb932a35c850200be58 329 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 17 325 35.99 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PACID_12770 43eb4df6a9a24cb932a35c850200be58 329 Gene3D G3DSA:1.10.150.170 126 232 4.2E-95 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 PACID_12770 43eb4df6a9a24cb932a35c850200be58 329 Gene3D G3DSA:3.40.50.150 17 321 4.2E-95 T 14-10-2018 PACID_12770 43eb4df6a9a24cb932a35c850200be58 329 PIRSF PIRSF004486 12 326 6.3E-97 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 PACID_12770 43eb4df6a9a24cb932a35c850200be58 329 SUPERFAMILY SSF53335 17 325 2.98E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_09870 70d38ba0a1fc851f86f0651358625b98 298 PIRSF PIRSF005902 17 288 9.7E-64 T 14-10-2018 IPR001130 TatD family GO:0016788 PACID_09870 70d38ba0a1fc851f86f0651358625b98 298 Pfam PF01026 TatD related DNase 26 285 5.0E-59 T 14-10-2018 IPR001130 TatD family GO:0016788 PACID_09870 70d38ba0a1fc851f86f0651358625b98 298 SUPERFAMILY SSF51556 23 286 2.7E-66 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_09870 70d38ba0a1fc851f86f0651358625b98 298 Gene3D G3DSA:3.20.20.140 20 286 7.9E-67 T 14-10-2018 PACID_09870 70d38ba0a1fc851f86f0651358625b98 298 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 222 238 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 PACID_09870 70d38ba0a1fc851f86f0651358625b98 298 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 24 285 8.9E-62 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 Gene3D G3DSA:3.30.1360.40 1 72 2.3E-18 T 14-10-2018 PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 Gene3D G3DSA:2.40.100.10 73 202 2.4E-49 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 SMART SM00796 1 190 2.7E-77 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 226 511 1.2E-70 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 SUPERFAMILY SSF50891 79 204 1.52E-34 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 2 189 4.7E-57 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 SMART SM00797 245 512 3.6E-85 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 SUPERFAMILY SSF50891 403 511 2.96E-15 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 Gene3D G3DSA:2.40.100.10 401 513 4.6E-43 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 246 511 7.2E-80 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B PACID_09820 9c1a2cdccf815c7805384ab0fc02162d 513 SUPERFAMILY SSF160467 3 67 9.81E-8 T 14-10-2018 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 PRINTS PR00173 Glutamate-aspartate symporter signature 350 370 5.6E-22 T 14-10-2018 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 5.6E-22 T 14-10-2018 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 5.6E-22 T 14-10-2018 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 PRINTS PR00173 Glutamate-aspartate symporter signature 217 236 5.6E-22 T 14-10-2018 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 PRINTS PR00173 Glutamate-aspartate symporter signature 138 160 5.6E-22 T 14-10-2018 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 PRINTS PR00173 Glutamate-aspartate symporter signature 288 314 5.6E-22 T 14-10-2018 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 PRINTS PR00173 Glutamate-aspartate symporter signature 323 342 5.6E-22 T 14-10-2018 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 Pfam PF00375 Sodium:dicarboxylate symporter family 7 394 1.5E-89 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 Gene3D G3DSA:1.10.3860.10 2 413 7.6E-95 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PACID_05600 0ef0ae1213f5a97db67d6c9ed36c2612 432 SUPERFAMILY SSF118215 8 394 6.67E-81 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 Pfam PF12848 ABC transporter 229 303 5.0E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 Pfam PF00005 ABC transporter 340 473 2.0E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 SMART SM00382 348 518 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 SMART SM00382 30 237 3.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 Gene3D G3DSA:3.40.50.300 286 560 2.1E-61 T 14-10-2018 PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 SUPERFAMILY SSF52540 8 241 3.18E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 558 2.5E-265 T 14-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 Pfam PF00005 ABC transporter 21 190 7.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 SUPERFAMILY SSF52540 307 513 1.92E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23230 55c7bd1b645e7358d2739be1ac230881 562 Gene3D G3DSA:3.40.50.300 2 284 1.0E-75 T 14-10-2018 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 PIRSF PIRSF036484 7 410 2.2E-209 T 14-10-2018 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 191 207 9.7E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 15 34 9.7E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 119 135 9.7E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 152 169 9.7E-15 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 Hamap MF_01977 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 9 406 62.885 T 14-10-2018 IPR011405 Pyrophosphate-dependent phosphofructokinase SMc01852 type GO:0006096|GO:0047334 KEGG: 00010+2.7.1.90|KEGG: 00030+2.7.1.90|KEGG: 00051+2.7.1.90|MetaCyc: PWY-1042 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 Gene3D G3DSA:3.40.50.450 2 226 1.9E-44 T 14-10-2018 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 SUPERFAMILY SSF53784 5 407 2.09E-79 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_16670 86341cae1a54766ad373ab5b929dbc80 413 Pfam PF00365 Phosphofructokinase 12 343 9.6E-36 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_13310 ddf345647d141d735b7900c92f21a2b0 87 SUPERFAMILY SSF141091 2 85 7.19E-23 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13310 ddf345647d141d735b7900c92f21a2b0 87 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 85 1.2E-18 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13310 ddf345647d141d735b7900c92f21a2b0 87 ProSitePatterns PS01169 Ribosomal protein L21 signature. 56 78 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_13310 ddf345647d141d735b7900c92f21a2b0 87 Pfam PF00829 Ribosomal prokaryotic L21 protein 2 85 2.1E-24 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_09260 2d89670b876204e455d13146a62007c2 235 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 5 61 2.9E-15 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 PACID_09260 2d89670b876204e455d13146a62007c2 235 Gene3D G3DSA:1.10.10.10 3 74 5.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_09260 2d89670b876204e455d13146a62007c2 235 SUPERFAMILY SSF46785 4 63 7.21E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_09260 2d89670b876204e455d13146a62007c2 235 SMART SM00529 27 126 5.8E-38 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 PACID_09260 2d89670b876204e455d13146a62007c2 235 SUPERFAMILY SSF50037 131 230 1.33E-10 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal PACID_09260 2d89670b876204e455d13146a62007c2 235 Gene3D G3DSA:1.10.60.10 75 137 9.0E-25 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 PACID_09260 2d89670b876204e455d13146a62007c2 235 SUPERFAMILY SSF47979 66 135 5.76E-24 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 PACID_09260 2d89670b876204e455d13146a62007c2 235 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 66 134 8.9E-26 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 PACID_07620 ebc23cebb11750262b81028408757a30 455 SMART SM00382 50 240 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_07620 ebc23cebb11750262b81028408757a30 455 Gene3D G3DSA:3.40.50.300 32 276 1.7E-66 T 14-10-2018 PACID_07620 ebc23cebb11750262b81028408757a30 455 Gene3D G3DSA:3.10.580.10 281 392 1.3E-11 T 14-10-2018 PACID_07620 ebc23cebb11750262b81028408757a30 455 SUPERFAMILY SSF52540 38 269 1.1E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07620 ebc23cebb11750262b81028408757a30 455 Pfam PF00005 ABC transporter 43 190 2.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_07620 ebc23cebb11750262b81028408757a30 455 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_07620 ebc23cebb11750262b81028408757a30 455 SUPERFAMILY SSF54631 272 389 3.41E-14 T 14-10-2018 PACID_07620 ebc23cebb11750262b81028408757a30 455 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 38 394 4.2E-120 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 PACID_21240 0a63aee4adb0161b53e9021c39b56b8c 383 Pfam PF02481 DNA recombination-mediator protein A 66 294 6.9E-65 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 PACID_21240 0a63aee4adb0161b53e9021c39b56b8c 383 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 68 299 6.0E-60 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 PACID_21240 0a63aee4adb0161b53e9021c39b56b8c 383 Gene3D G3DSA:3.40.50.450 4 306 5.9E-81 T 14-10-2018 PACID_21240 0a63aee4adb0161b53e9021c39b56b8c 383 SUPERFAMILY SSF102405 100 303 2.29E-30 T 14-10-2018 PACID_32180 72c3be06797fba85d8324c0887272241 232 Gene3D G3DSA:1.10.10.10 134 232 8.4E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_32180 72c3be06797fba85d8324c0887272241 232 SMART SM00448 1 112 7.7E-45 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_32180 72c3be06797fba85d8324c0887272241 232 Gene3D G3DSA:3.40.50.2300 1 133 1.1E-41 T 14-10-2018 PACID_32180 72c3be06797fba85d8324c0887272241 232 SMART SM00862 152 227 2.9E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_32180 72c3be06797fba85d8324c0887272241 232 SUPERFAMILY SSF52172 1 186 6.83E-45 T 14-10-2018 IPR011006 CheY-like superfamily PACID_32180 72c3be06797fba85d8324c0887272241 232 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_32180 72c3be06797fba85d8324c0887272241 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 1.3E-23 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_30630 55031aa4bf49e12c783dce8f7e7b4037 154 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 154 45.083 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PACID_30630 55031aa4bf49e12c783dce8f7e7b4037 154 Gene3D G3DSA:3.40.140.10 4 154 9.1E-51 T 14-10-2018 PACID_30630 55031aa4bf49e12c783dce8f7e7b4037 154 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 95 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PACID_30630 55031aa4bf49e12c783dce8f7e7b4037 154 SUPERFAMILY SSF53927 6 153 8.53E-47 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PACID_30630 55031aa4bf49e12c783dce8f7e7b4037 154 Pfam PF14437 MafB19-like deaminase 4 154 6.0E-29 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 PACID_02400 42df2bfdade728ed00305f06b4fb8588 177 Gene3D G3DSA:1.20.1260.10 17 177 3.3E-50 T 14-10-2018 IPR012347 Ferritin-like PACID_02400 42df2bfdade728ed00305f06b4fb8588 177 ProSitePatterns PS00818 Dps protein family signature 1. 54 70 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PACID_02400 42df2bfdade728ed00305f06b4fb8588 177 Pfam PF00210 Ferritin-like domain 35 169 6.6E-20 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PACID_02400 42df2bfdade728ed00305f06b4fb8588 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 78 94 1.2E-9 T 14-10-2018 IPR002177 DNA-binding protein Dps PACID_02400 42df2bfdade728ed00305f06b4fb8588 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 54 70 1.2E-9 T 14-10-2018 IPR002177 DNA-binding protein Dps PACID_02400 42df2bfdade728ed00305f06b4fb8588 177 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 149 167 1.2E-9 T 14-10-2018 IPR002177 DNA-binding protein Dps PACID_02400 42df2bfdade728ed00305f06b4fb8588 177 SUPERFAMILY SSF47240 22 169 3.29E-45 T 14-10-2018 IPR009078 Ferritin-like superfamily PACID_02400 42df2bfdade728ed00305f06b4fb8588 177 PIRSF PIRSF005900 12 176 5.3E-39 T 14-10-2018 IPR002177 DNA-binding protein Dps PACID_33400 e0285c08f0a90f1931c2399b0506bcf9 454 Hamap MF_01221 UPF0210 protein . 4 454 50.749 T 14-10-2018 IPR007841 Uncharacterised protein family UPF0210 PACID_33400 e0285c08f0a90f1931c2399b0506bcf9 454 Pfam PF05167 Uncharacterised ACR (DUF711) 15 418 1.9E-174 T 14-10-2018 IPR007841 Uncharacterised protein family UPF0210 PACID_33400 e0285c08f0a90f1931c2399b0506bcf9 454 Gene3D G3DSA:3.20.70.20 4 454 5.2E-176 T 14-10-2018 PACID_33400 e0285c08f0a90f1931c2399b0506bcf9 454 SUPERFAMILY SSF51998 7 449 5.58E-173 T 14-10-2018 PACID_32510 79c72516dac3a0a7880d67840050a63e 418 SUPERFAMILY SSF53383 33 417 6.31E-100 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_32510 79c72516dac3a0a7880d67840050a63e 418 Pfam PF00155 Aminotransferase class I and II 52 413 1.4E-57 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_32510 79c72516dac3a0a7880d67840050a63e 418 Gene3D G3DSA:3.40.640.10 64 310 2.5E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_32510 79c72516dac3a0a7880d67840050a63e 418 Gene3D G3DSA:3.90.1150.10 41 413 2.5E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_08440 4b1c5a736858514b166a3f1ce51d4bbf 387 Gene3D G3DSA:3.40.640.10 2 248 4.2E-75 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_08440 4b1c5a736858514b166a3f1ce51d4bbf 387 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 381 7.0E-124 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PACID_08440 4b1c5a736858514b166a3f1ce51d4bbf 387 Gene3D G3DSA:3.90.1150.10 250 384 1.2E-46 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_08440 4b1c5a736858514b166a3f1ce51d4bbf 387 SUPERFAMILY SSF53383 5 382 3.93E-106 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_08440 4b1c5a736858514b166a3f1ce51d4bbf 387 PIRSF PIRSF001434 1 384 7.4E-125 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 PACID_01520 4b175988cb349009e84dd6e9dea11215 600 Gene3D G3DSA:3.40.50.300 337 574 3.6E-70 T 14-10-2018 PACID_01520 4b175988cb349009e84dd6e9dea11215 600 Pfam PF00005 ABC transporter 358 507 5.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_01520 4b175988cb349009e84dd6e9dea11215 600 Pfam PF00664 ABC transporter transmembrane region 28 290 3.3E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_01520 4b175988cb349009e84dd6e9dea11215 600 Gene3D G3DSA:1.20.1560.10 3 329 2.1E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_01520 4b175988cb349009e84dd6e9dea11215 600 SUPERFAMILY SSF52540 337 564 5.53E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01520 4b175988cb349009e84dd6e9dea11215 600 SUPERFAMILY SSF90123 15 332 1.44E-63 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_01520 4b175988cb349009e84dd6e9dea11215 600 SMART SM00382 367 553 7.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_13100 41227a3db0394761ebb0d1a297b212e2 249 Gene3D G3DSA:1.20.120.450 16 168 1.1E-36 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_13100 41227a3db0394761ebb0d1a297b212e2 249 SUPERFAMILY SSF55718 171 241 1.29E-5 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PACID_13100 41227a3db0394761ebb0d1a297b212e2 249 Pfam PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain 28 162 2.8E-16 T 14-10-2018 IPR024344 Mycothiol-dependent maleylpyruvate isomerase, metal-binding domain GO:0046872 PACID_13100 41227a3db0394761ebb0d1a297b212e2 249 TIGRFAM TIGR03083 TIGR03083: uncharacterized Actinobacterial protein TIGR03083 28 231 2.1E-27 T 14-10-2018 IPR017517 Conserved hypothetical protein CHP03083, actinobacterial-type PACID_13100 41227a3db0394761ebb0d1a297b212e2 249 SUPERFAMILY SSF109854 16 168 1.68E-29 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_11120 f4aeb9beee3a200a4990654641033a86 398 Pfam PF07995 Glucose / Sorbosone dehydrogenase 78 382 7.4E-68 T 14-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase PACID_11120 f4aeb9beee3a200a4990654641033a86 398 SUPERFAMILY SSF50952 69 378 6.8E-47 T 14-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 PACID_11120 f4aeb9beee3a200a4990654641033a86 398 Gene3D G3DSA:2.120.10.30 49 398 4.2E-126 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 2.0E-20 T 14-10-2018 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.6E-44 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 27.685 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 Gene3D G3DSA:1.10.720.90 2 56 1.9E-17 T 14-10-2018 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 SUPERFAMILY SSF74731 3 115 3.27E-43 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 Pfam PF00453 Ribosomal protein L20 3 109 3.0E-43 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 PRINTS PR00062 Ribosomal protein L20 signature 42 71 9.3E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 PRINTS PR00062 Ribosomal protein L20 signature 75 101 9.3E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 PRINTS PR00062 Ribosomal protein L20 signature 12 41 9.3E-37 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10190 e61c92e79b17cc56cc9c0149cdeb62e4 123 Gene3D G3DSA:1.10.1900.20 57 118 1.7E-26 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_23530 9434462b1339ed9600c9ffd53938f555 398 Gene3D G3DSA:3.30.565.10 261 396 9.8E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_23530 9434462b1339ed9600c9ffd53938f555 398 PIRSF PIRSF037434 2 398 2.3E-126 T 14-10-2018 IPR017205 Signal transduction histidine kinase, ChrS PACID_23530 9434462b1339ed9600c9ffd53938f555 398 SMART SM00387 295 393 1.2E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_23530 9434462b1339ed9600c9ffd53938f555 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 371 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_23530 9434462b1339ed9600c9ffd53938f555 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 390 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_23530 9434462b1339ed9600c9ffd53938f555 398 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 345 1.5E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_23530 9434462b1339ed9600c9ffd53938f555 398 Pfam PF07730 Histidine kinase 196 259 2.2E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_23530 9434462b1339ed9600c9ffd53938f555 398 SUPERFAMILY SSF55874 265 391 8.49E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_23530 9434462b1339ed9600c9ffd53938f555 398 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 392 6.2E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_10390 f63525766377e34477dd27a83a853f8c 165 Hamap MF_00105 Transcription elongation factor GreA [greA]. 6 164 26.065 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 PACID_10390 f63525766377e34477dd27a83a853f8c 165 SUPERFAMILY SSF46557 7 80 1.57E-25 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 PACID_10390 f63525766377e34477dd27a83a853f8c 165 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 21 52 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 PACID_10390 f63525766377e34477dd27a83a853f8c 165 Pfam PF03449 Transcription elongation factor, N-terminal 8 78 4.4E-29 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 PACID_10390 f63525766377e34477dd27a83a853f8c 165 SUPERFAMILY SSF54534 84 163 7.98E-11 T 14-10-2018 PACID_10390 f63525766377e34477dd27a83a853f8c 165 Gene3D G3DSA:3.10.50.30 83 165 1.9E-9 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 PACID_10390 f63525766377e34477dd27a83a853f8c 165 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 9 163 1.1E-42 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 PACID_10390 f63525766377e34477dd27a83a853f8c 165 Gene3D G3DSA:1.10.287.180 6 78 2.5E-27 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 PACID_10390 f63525766377e34477dd27a83a853f8c 165 PIRSF PIRSF006092 3 165 2.3E-32 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 PACID_10390 f63525766377e34477dd27a83a853f8c 165 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 164 6.0E-15 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 PACID_31830 5ed3d1f2b78175a7059d05830c4d3dcc 582 Pfam PF08310 LGFP repeat 492 542 1.0E-7 T 14-10-2018 IPR013207 LGFP PACID_31830 5ed3d1f2b78175a7059d05830c4d3dcc 582 Pfam PF08310 LGFP repeat 390 437 1.2E-10 T 14-10-2018 IPR013207 LGFP PACID_31830 5ed3d1f2b78175a7059d05830c4d3dcc 582 SMART SM00641 154 264 7.6E-36 T 14-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup PACID_31830 5ed3d1f2b78175a7059d05830c4d3dcc 582 SUPERFAMILY SSF51445 153 355 1.26E-54 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31830 5ed3d1f2b78175a7059d05830c4d3dcc 582 Pfam PF01183 Glycosyl hydrolases family 25 158 338 2.6E-42 T 14-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 PACID_31830 5ed3d1f2b78175a7059d05830c4d3dcc 582 Gene3D G3DSA:3.20.20.80 151 357 5.1E-72 T 14-10-2018 PACID_24910 5163b2efd77e993eba773efe406397eb 516 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 29 483 2.0E-178 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PACID_24910 5163b2efd77e993eba773efe406397eb 516 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 29 515 82.406 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PACID_24910 5163b2efd77e993eba773efe406397eb 516 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 29 502 3.7E-155 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 PACID_24910 5163b2efd77e993eba773efe406397eb 516 SMART SM01240 28 502 4.2E-302 T 14-10-2018 PACID_24910 5163b2efd77e993eba773efe406397eb 516 Pfam PF00571 CBS domain 170 223 8.8E-7 T 14-10-2018 IPR000644 CBS domain PACID_24910 5163b2efd77e993eba773efe406397eb 516 Pfam PF00571 CBS domain 114 160 7.7E-9 T 14-10-2018 IPR000644 CBS domain PACID_24910 5163b2efd77e993eba773efe406397eb 516 SUPERFAMILY SSF54631 114 223 1.12E-28 T 14-10-2018 PACID_24910 5163b2efd77e993eba773efe406397eb 516 SUPERFAMILY SSF51412 26 506 5.76E-114 T 14-10-2018 PACID_24910 5163b2efd77e993eba773efe406397eb 516 PIRSF PIRSF000130 20 516 6.5E-201 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PACID_24910 5163b2efd77e993eba773efe406397eb 516 Gene3D G3DSA:3.20.20.70 22 515 5.5E-208 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_24910 5163b2efd77e993eba773efe406397eb 516 SMART SM00116 117 165 1.8E-7 T 14-10-2018 IPR000644 CBS domain PACID_24910 5163b2efd77e993eba773efe406397eb 516 SMART SM00116 178 226 5.8E-5 T 14-10-2018 IPR000644 CBS domain PACID_24910 5163b2efd77e993eba773efe406397eb 516 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 317 329 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 PACID_08400 4eb418663bb47fc0d11f116edef59988 326 Pfam PF00588 SpoU rRNA Methylase family 173 314 3.7E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PACID_08400 4eb418663bb47fc0d11f116edef59988 326 SUPERFAMILY SSF55315 78 152 1.29E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like PACID_08400 4eb418663bb47fc0d11f116edef59988 326 SMART SM00967 80 156 9.1E-15 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 PACID_08400 4eb418663bb47fc0d11f116edef59988 326 SUPERFAMILY SSF75217 144 321 2.09E-41 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PACID_08400 4eb418663bb47fc0d11f116edef59988 326 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 80 155 7.0E-16 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 PACID_08400 4eb418663bb47fc0d11f116edef59988 326 Gene3D G3DSA:3.40.1280.10 152 321 3.2E-50 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PACID_08400 4eb418663bb47fc0d11f116edef59988 326 Gene3D G3DSA:3.30.1330.30 73 151 2.7E-9 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like PACID_08400 4eb418663bb47fc0d11f116edef59988 326 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 79 319 1.5E-58 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 Gene3D G3DSA:3.30.1360.120 141 298 6.1E-31 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 Gene3D G3DSA:3.30.1360.120 29 140 1.0E-13 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 208 287 1.2E-7 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 SUPERFAMILY SSF103025 20 223 1.35E-42 T 14-10-2018 PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 172 233 7.5E-21 T 14-10-2018 IPR017703 YgfZ/GcvT conserved site PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 Pfam PF01571 Aminomethyltransferase folate-binding domain 154 200 5.2E-5 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 Pfam PF01571 Aminomethyltransferase folate-binding domain 41 126 2.8E-8 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 PIRSF PIRSF006487 23 134 0.013 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PACID_27480 aa2fc327a6badea9f9a309b7f6787c3d 310 PIRSF PIRSF006487 146 304 2.5E-6 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PACID_04380 5ca00e0ddb10c9c743763114a192edd8 223 Pfam PF03473 MOSC domain 51 160 4.0E-19 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 PACID_04380 5ca00e0ddb10c9c743763114a192edd8 223 Gene3D G3DSA:2.40.33.20 5 206 2.9E-55 T 14-10-2018 PACID_04380 5ca00e0ddb10c9c743763114a192edd8 223 SUPERFAMILY SSF50800 3 177 7.32E-50 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 Gene3D G3DSA:1.10.1160.10 274 352 4.7E-30 T 14-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 Gene3D G3DSA:3.90.800.10 113 221 5.1E-91 T 14-10-2018 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 41 567 3.3E-185 T 14-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 Gene3D G3DSA:3.40.50.620 41 260 5.1E-91 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 SUPERFAMILY SSF52374 41 359 1.21E-82 T 14-10-2018 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 353 549 9.2E-51 T 14-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 SUPERFAMILY SSF50715 353 564 4.13E-61 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 41 350 1.2E-90 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 PRINTS PR00987 Glutamyl-tRNA synthetase signature 222 232 4.3E-6 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 56 4.3E-6 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 PRINTS PR00987 Glutamyl-tRNA synthetase signature 73 86 4.3E-6 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 Gene3D G3DSA:2.40.240.10 353 563 4.9E-64 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_25800 a77490d5eca7069f21ab3688d46b9363 574 Gene3D G3DSA:2.40.240.10 361 484 4.9E-64 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_04100 13344430f815a7e193d8b1e233e73a50 328 Gene3D G3DSA:3.40.50.720 1 120 1.9E-34 T 14-10-2018 PACID_04100 13344430f815a7e193d8b1e233e73a50 328 SUPERFAMILY SSF51735 4 152 7.18E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_04100 13344430f815a7e193d8b1e233e73a50 328 SUPERFAMILY SSF55347 127 291 6.05E-34 T 14-10-2018 PACID_04100 13344430f815a7e193d8b1e233e73a50 328 Gene3D G3DSA:3.30.360.10 121 326 1.4E-51 T 14-10-2018 PACID_04100 13344430f815a7e193d8b1e233e73a50 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 213 1.2E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_04100 13344430f815a7e193d8b1e233e73a50 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 2.5E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_00360 8446a7f9def599835149105ff483861b 1039 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 32 228 1.4E-38 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_00360 8446a7f9def599835149105ff483861b 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 156 171 1.7E-33 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_00360 8446a7f9def599835149105ff483861b 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 330 344 1.7E-33 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_00360 8446a7f9def599835149105ff483861b 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 361 379 1.7E-33 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_00360 8446a7f9def599835149105ff483861b 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 524 539 1.7E-33 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_00360 8446a7f9def599835149105ff483861b 1039 PRINTS PR00132 Glycosyl hydrolase family 2 signature 438 453 1.7E-33 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_00360 8446a7f9def599835149105ff483861b 1039 Gene3D G3DSA:2.60.40.10 626 724 5.7E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_00360 8446a7f9def599835149105ff483861b 1039 SUPERFAMILY SSF74650 755 1037 5.34E-59 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PACID_00360 8446a7f9def599835149105ff483861b 1039 SUPERFAMILY SSF51445 321 615 3.66E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_00360 8446a7f9def599835149105ff483861b 1039 Gene3D G3DSA:2.70.98.10 732 1038 2.0E-85 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PACID_00360 8446a7f9def599835149105ff483861b 1039 Gene3D G3DSA:2.60.120.260 2 228 8.6E-70 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_00360 8446a7f9def599835149105ff483861b 1039 Gene3D G3DSA:3.20.20.80 320 617 1.1E-105 T 14-10-2018 PACID_00360 8446a7f9def599835149105ff483861b 1039 Pfam PF02929 Beta galactosidase small chain 763 1026 4.6E-46 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_00360 8446a7f9def599835149105ff483861b 1039 Gene3D G3DSA:2.60.40.10 229 319 1.0E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_00360 8446a7f9def599835149105ff483861b 1039 SUPERFAMILY SSF49303 232 320 3.45E-17 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PACID_00360 8446a7f9def599835149105ff483861b 1039 SUPERFAMILY SSF49303 616 720 5.76E-26 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PACID_00360 8446a7f9def599835149105ff483861b 1039 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 321 621 3.0E-93 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 PACID_00360 8446a7f9def599835149105ff483861b 1039 SMART SM01038 749 1037 1.1E-49 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_00360 8446a7f9def599835149105ff483861b 1039 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 438 452 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_00360 8446a7f9def599835149105ff483861b 1039 Pfam PF16353 Domain of unknown function(DUF4981) 631 717 3.5E-22 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_00360 8446a7f9def599835149105ff483861b 1039 SUPERFAMILY SSF49785 17 228 9.64E-56 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_00360 8446a7f9def599835149105ff483861b 1039 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 371 396 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_17170 2932fe94973b60e3fbf4c58f6abf79fb 364 Pfam PF01212 Beta-eliminating lyase 12 302 5.4E-46 T 14-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 PACID_17170 2932fe94973b60e3fbf4c58f6abf79fb 364 Gene3D G3DSA:3.90.1150.10 14 342 7.9E-109 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_17170 2932fe94973b60e3fbf4c58f6abf79fb 364 SUPERFAMILY SSF53383 11 351 5.36E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_17170 2932fe94973b60e3fbf4c58f6abf79fb 364 Gene3D G3DSA:3.40.640.10 21 261 7.9E-109 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_13660 4cd58ce6da8f7c801d881074f51204d9 478 Gene3D G3DSA:3.40.440.10 13 263 1.1E-55 T 14-10-2018 PACID_13660 4cd58ce6da8f7c801d881074f51204d9 478 Pfam PF00709 Adenylosuccinate synthetase 12 449 1.5E-56 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_13660 4cd58ce6da8f7c801d881074f51204d9 478 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 478 36.797 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_13660 4cd58ce6da8f7c801d881074f51204d9 478 SMART SM00788 11 452 9.8E-17 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_13660 4cd58ce6da8f7c801d881074f51204d9 478 Gene3D G3DSA:1.10.300.10 112 216 1.1E-55 T 14-10-2018 PACID_13660 4cd58ce6da8f7c801d881074f51204d9 478 Gene3D G3DSA:3.90.170.10 309 452 7.4E-7 T 14-10-2018 PACID_13660 4cd58ce6da8f7c801d881074f51204d9 478 SUPERFAMILY SSF52540 11 453 1.49E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13660 4cd58ce6da8f7c801d881074f51204d9 478 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 18 25 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 SMART SM00487 254 468 2.3E-16 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 Pfam PF04851 Type III restriction enzyme, res subunit 268 433 6.7E-18 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 SUPERFAMILY SSF52540 215 480 8.6E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 703 2.2E-147 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 SUPERFAMILY SSF52540 387 683 6.53E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 Gene3D G3DSA:3.40.50.300 452 708 1.1E-35 T 14-10-2018 PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 Pfam PF11867 Domain of unknown function (DUF3387) 705 1046 3.4E-94 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 Gene3D G3DSA:3.90.1570.50 95 253 2.9E-24 T 14-10-2018 PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 Gene3D G3DSA:3.40.50.300 257 451 9.3E-47 T 14-10-2018 PACID_07530 5b9197ce0644fd9a770b395af220e0d7 1052 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 2 203 4.3E-30 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 176 2.5E-19 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 Gene3D G3DSA:3.40.50.720 11 273 1.1E-54 T 14-10-2018 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 SUPERFAMILY SSF51735 12 271 3.15E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 SUPERFAMILY SSF48179 277 474 2.38E-37 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 Gene3D G3DSA:1.10.1040.10 276 476 1.3E-46 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 PRINTS PR00084 Mannitol dehydrogenase signature 168 181 8.9E-8 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 PRINTS PR00084 Mannitol dehydrogenase signature 239 254 8.9E-8 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 PRINTS PR00084 Mannitol dehydrogenase signature 209 222 8.9E-8 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 8.9E-8 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PACID_03710 87acfb24e8c967965c7c6274a0f81c1c 479 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 208 447 9.4E-45 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 PACID_04760 1ea557a0eb8ab4a7a67e8c5b8bc7d75d 85 Pfam PF00381 PTS HPr component phosphorylation site 3 80 5.2E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_04760 1ea557a0eb8ab4a7a67e8c5b8bc7d75d 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 75 1.7E-21 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_04760 1ea557a0eb8ab4a7a67e8c5b8bc7d75d 85 Gene3D G3DSA:3.30.1340.10 1 84 9.3E-18 T 14-10-2018 IPR035895 HPr-like superfamily PACID_04760 1ea557a0eb8ab4a7a67e8c5b8bc7d75d 85 PRINTS PR00107 Phosphocarrier protein signature 54 71 7.9E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_04760 1ea557a0eb8ab4a7a67e8c5b8bc7d75d 85 PRINTS PR00107 Phosphocarrier protein signature 39 54 7.9E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_04760 1ea557a0eb8ab4a7a67e8c5b8bc7d75d 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.9E-8 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_04760 1ea557a0eb8ab4a7a67e8c5b8bc7d75d 85 SUPERFAMILY SSF55594 1 80 1.7E-15 T 14-10-2018 IPR035895 HPr-like superfamily PACID_04760 1ea557a0eb8ab4a7a67e8c5b8bc7d75d 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PACID_34160 a0978f1f8413cb91fd4ac0dd228937f2 497 Gene3D G3DSA:3.40.309.10 249 450 5.7E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_34160 a0978f1f8413cb91fd4ac0dd228937f2 497 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 4 481 1.3E-189 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 PACID_34160 a0978f1f8413cb91fd4ac0dd228937f2 497 SUPERFAMILY SSF53720 2 484 1.09E-142 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_34160 a0978f1f8413cb91fd4ac0dd228937f2 497 Gene3D G3DSA:3.40.605.10 24 458 5.7E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_34160 a0978f1f8413cb91fd4ac0dd228937f2 497 Pfam PF00171 Aldehyde dehydrogenase family 19 477 1.5E-132 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_02140 8e9c966e23b816b0bf7d4777a458fdc7 93 SUPERFAMILY SSF54975 3 91 6.54E-27 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PACID_02140 8e9c966e23b816b0bf7d4777a458fdc7 93 ProSitePatterns PS00150 Acylphosphatase signature 1. 12 22 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PACID_02140 8e9c966e23b816b0bf7d4777a458fdc7 93 Gene3D G3DSA:3.30.70.100 1 92 6.6E-29 T 14-10-2018 PACID_02140 8e9c966e23b816b0bf7d4777a458fdc7 93 PRINTS PR00112 Acylphosphatase signature 28 53 6.5E-5 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PACID_02140 8e9c966e23b816b0bf7d4777a458fdc7 93 PRINTS PR00112 Acylphosphatase signature 7 22 6.5E-5 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PACID_02140 8e9c966e23b816b0bf7d4777a458fdc7 93 Pfam PF00708 Acylphosphatase 9 91 5.9E-23 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 PACID_05450 236ccf26200d17cb8fbb951a54fec6cc 578 Gene3D G3DSA:3.40.50.300 325 578 3.6E-78 T 14-10-2018 PACID_05450 236ccf26200d17cb8fbb951a54fec6cc 578 Gene3D G3DSA:1.20.1560.10 2 316 2.4E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_05450 236ccf26200d17cb8fbb951a54fec6cc 578 SUPERFAMILY SSF52540 324 570 2.17E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_05450 236ccf26200d17cb8fbb951a54fec6cc 578 Pfam PF00005 ABC transporter 351 498 2.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_05450 236ccf26200d17cb8fbb951a54fec6cc 578 SUPERFAMILY SSF90123 7 315 1.44E-66 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_05450 236ccf26200d17cb8fbb951a54fec6cc 578 SMART SM00382 360 546 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_05450 236ccf26200d17cb8fbb951a54fec6cc 578 ProSitePatterns PS00211 ABC transporters family signature. 472 486 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_05450 236ccf26200d17cb8fbb951a54fec6cc 578 Pfam PF00664 ABC transporter transmembrane region 17 288 1.8E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_16630 5ea9f11ac6bf722ab556e1dfdc0b95f5 227 SUPERFAMILY SSF46955 21 87 2.82E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PACID_16630 5ea9f11ac6bf722ab556e1dfdc0b95f5 227 SMART SM00422 7 80 9.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_16630 5ea9f11ac6bf722ab556e1dfdc0b95f5 227 Gene3D G3DSA:1.10.1660.10 3 81 6.8E-18 T 14-10-2018 PACID_16630 5ea9f11ac6bf722ab556e1dfdc0b95f5 227 Pfam PF00376 MerR family regulatory protein 7 48 3.6E-11 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_22530 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_22530 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_22530 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_21050 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_21050 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_21050 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_17070 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_17070 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_17070 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_06220 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_06220 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_06220 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_30960 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_30960 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_30960 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_22080 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_22080 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_22080 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_08090 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_08090 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_08090 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_30880 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_30880 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_30880 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_14850 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_14850 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_14850 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_05420 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_05420 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_05420 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_12390 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_12390 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_12390 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_02680 e5889fb032fc2c04df5bd40986bd7a5a 405 Pfam PF00665 Integrase core domain 182 288 1.7E-11 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_02680 e5889fb032fc2c04df5bd40986bd7a5a 405 Gene3D G3DSA:3.30.420.10 197 318 1.5E-5 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_02680 e5889fb032fc2c04df5bd40986bd7a5a 405 SUPERFAMILY SSF53098 183 321 5.92E-15 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_16030 d0f207215d08f5fad912ac8d127b1d5b 312 SUPERFAMILY SSF69635 188 301 2.98E-10 T 14-10-2018 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 PIRSF PIRSF002144 1 93 5.0E-30 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 24.4 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 SUPERFAMILY SSF54570 3 84 1.2E-33 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 Gene3D G3DSA:3.30.860.10 1 93 6.3E-39 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 Pfam PF00203 Ribosomal protein S19 3 83 2.6E-35 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 5.6E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 5.6E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 5.6E-23 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25720 49be4abe6570cfa5318c46522ee2bb4d 93 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 1.1E-45 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 Gene3D G3DSA:3.40.50.1100 54 356 2.6E-127 T 14-10-2018 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 82 95 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 Gene3D G3DSA:3.40.1020.10 367 541 1.3E-62 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 SUPERFAMILY SSF55021 448 540 1.35E-19 T 14-10-2018 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 SUPERFAMILY SSF55021 365 451 9.16E-26 T 14-10-2018 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 59 345 1.5E-78 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 SUPERFAMILY SSF53686 39 393 3.54E-98 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 44 540 1.8E-231 T 14-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 358 447 1.6E-26 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 460 539 2.2E-16 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 PACID_27870 a95cbbd3d7e16c71acda9c4a57abc932 543 Gene3D G3DSA:3.40.50.1100 90 186 2.6E-127 T 14-10-2018 PACID_07400 9ba61efe8e481be7567d5ef31a3c10da 365 Pfam PF00294 pfkB family carbohydrate kinase 16 305 3.2E-35 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PACID_07400 9ba61efe8e481be7567d5ef31a3c10da 365 Gene3D G3DSA:3.40.1190.20 12 326 7.5E-58 T 14-10-2018 IPR029056 Ribokinase-like PACID_07400 9ba61efe8e481be7567d5ef31a3c10da 365 SUPERFAMILY SSF53613 14 322 5.3E-53 T 14-10-2018 IPR029056 Ribokinase-like PACID_33590 9afe7bb03df44fb7977520682a3941d4 312 SUPERFAMILY SSF50182 143 200 4.58E-12 T 14-10-2018 IPR010920 LSM domain superfamily PACID_33590 9afe7bb03df44fb7977520682a3941d4 312 SUPERFAMILY SSF82861 81 141 7.59E-9 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 PACID_33590 9afe7bb03df44fb7977520682a3941d4 312 Gene3D G3DSA:2.30.30.60 158 207 4.3E-20 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily PACID_33590 9afe7bb03df44fb7977520682a3941d4 312 SUPERFAMILY SSF82689 208 299 1.23E-10 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 PACID_33590 9afe7bb03df44fb7977520682a3941d4 312 Gene3D G3DSA:3.30.70.100 210 298 4.3E-19 T 14-10-2018 PACID_33590 9afe7bb03df44fb7977520682a3941d4 312 Pfam PF00924 Mechanosensitive ion channel 103 299 2.6E-37 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 PACID_02330 1eec9141e2d897066c57171639377568 917 Pfam PF07732 Multicopper oxidase 659 767 7.2E-14 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 PACID_02330 1eec9141e2d897066c57171639377568 917 Gene3D G3DSA:2.60.40.420 646 767 7.1E-35 T 14-10-2018 IPR008972 Cupredoxin PACID_02330 1eec9141e2d897066c57171639377568 917 Gene3D G3DSA:2.60.40.420 768 916 5.4E-53 T 14-10-2018 IPR008972 Cupredoxin PACID_02330 1eec9141e2d897066c57171639377568 917 Gene3D G3DSA:2.60.40.420 500 608 3.6E-10 T 14-10-2018 IPR008972 Cupredoxin PACID_02330 1eec9141e2d897066c57171639377568 917 SUPERFAMILY SSF49503 768 915 4.08E-38 T 14-10-2018 IPR008972 Cupredoxin PACID_02330 1eec9141e2d897066c57171639377568 917 PRINTS PR00695 Copper containing nitrite reductase signature 750 766 3.2E-6 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PACID_02330 1eec9141e2d897066c57171639377568 917 PRINTS PR00695 Copper containing nitrite reductase signature 733 748 3.2E-6 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PACID_02330 1eec9141e2d897066c57171639377568 917 PRINTS PR00695 Copper containing nitrite reductase signature 676 692 3.2E-6 T 14-10-2018 IPR001287 Nitrite reductase, copper-type GO:0005507|GO:0006807|GO:0050421|GO:0055114 KEGG: 00910+1.7.2.1|MetaCyc: PWY-6523|MetaCyc: PWY-6748|MetaCyc: PWY-7084 PACID_02330 1eec9141e2d897066c57171639377568 917 SUPERFAMILY SSF49503 651 783 9.17E-32 T 14-10-2018 IPR008972 Cupredoxin PACID_02330 1eec9141e2d897066c57171639377568 917 SUPERFAMILY SSF49503 517 616 7.21E-10 T 14-10-2018 IPR008972 Cupredoxin PACID_02330 1eec9141e2d897066c57171639377568 917 Pfam PF13473 Cupredoxin-like domain 516 579 1.9E-8 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain PACID_11230 5d2a3b4bdc26512f0de303077e70e5a1 77 Pfam PF13275 S4 domain 2 63 1.6E-26 T 14-10-2018 PACID_11230 5d2a3b4bdc26512f0de303077e70e5a1 77 SMART SM00363 7 72 9.1E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_11230 5d2a3b4bdc26512f0de303077e70e5a1 77 SUPERFAMILY SSF55174 2 58 1.26E-19 T 14-10-2018 PACID_11230 5d2a3b4bdc26512f0de303077e70e5a1 77 Gene3D G3DSA:3.10.290.10 1 64 2.0E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PACID_20090 34d4ed7de0308b46c25d84676bb0f750 1051 Gene3D G3DSA:3.40.50.300 17 284 8.8E-34 T 14-10-2018 PACID_20090 34d4ed7de0308b46c25d84676bb0f750 1051 Gene3D G3DSA:1.10.10.160 110 202 8.8E-34 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily PACID_20090 34d4ed7de0308b46c25d84676bb0f750 1051 Gene3D G3DSA:3.40.50.300 344 446 2.2E-6 T 14-10-2018 PACID_20090 34d4ed7de0308b46c25d84676bb0f750 1051 Gene3D G3DSA:3.40.50.300 559 695 5.8E-16 T 14-10-2018 PACID_20090 34d4ed7de0308b46c25d84676bb0f750 1051 Pfam PF12705 PD-(D/E)XK nuclease superfamily 769 1031 3.5E-28 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PACID_20090 34d4ed7de0308b46c25d84676bb0f750 1051 Pfam PF13361 UvrD-like helicase C-terminal domain 570 669 4.5E-8 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_20090 34d4ed7de0308b46c25d84676bb0f750 1051 Pfam PF00580 UvrD/REP helicase N-terminal domain 18 279 5.3E-17 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PACID_20090 34d4ed7de0308b46c25d84676bb0f750 1051 SUPERFAMILY SSF52540 14 691 8.39E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_18880 6082638a3557e85d950af7806598e335 195 SMART SM00857 2 139 4.7E-53 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PACID_18880 6082638a3557e85d950af7806598e335 195 SUPERFAMILY SSF46689 141 184 1.4E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_18880 6082638a3557e85d950af7806598e335 195 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PACID_18880 6082638a3557e85d950af7806598e335 195 Pfam PF00239 Resolvase, N terminal domain 3 138 2.6E-43 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PACID_18880 6082638a3557e85d950af7806598e335 195 Pfam PF13518 Helix-turn-helix domain 154 194 2.8E-7 T 14-10-2018 PACID_18880 6082638a3557e85d950af7806598e335 195 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PACID_18880 6082638a3557e85d950af7806598e335 195 SUPERFAMILY SSF53041 2 138 1.44E-41 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PACID_18880 6082638a3557e85d950af7806598e335 195 Gene3D G3DSA:3.40.50.1390 1 123 5.5E-38 T 14-10-2018 PACID_18880 6082638a3557e85d950af7806598e335 195 Gene3D G3DSA:1.10.10.10 124 190 4.0E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18640 8d641ce2c26f32d6f82b09e952176851 285 Gene3D G3DSA:3.40.190.290 84 282 3.7E-60 T 14-10-2018 PACID_18640 8d641ce2c26f32d6f82b09e952176851 285 Pfam PF03466 LysR substrate binding domain 110 280 9.2E-16 T 14-10-2018 IPR005119 LysR, substrate-binding PACID_18640 8d641ce2c26f32d6f82b09e952176851 285 SUPERFAMILY SSF46785 1 98 6.81E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_18640 8d641ce2c26f32d6f82b09e952176851 285 Gene3D G3DSA:1.10.10.10 1 81 1.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18640 8d641ce2c26f32d6f82b09e952176851 285 SUPERFAMILY SSF53850 85 278 4.52E-20 T 14-10-2018 PACID_18640 8d641ce2c26f32d6f82b09e952176851 285 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 60 4.7E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 ProSitePatterns PS00622 LuxR-type HTH domain signature. 189 216 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 189 4.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 205 4.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 205 217 4.7E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 Pfam PF00072 Response regulator receiver domain 23 138 1.5E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 SUPERFAMILY SSF46894 166 235 1.43E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 Gene3D G3DSA:3.40.50.12740 21 235 2.9E-55 T 14-10-2018 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 SMART SM00421 172 229 1.6E-27 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 SMART SM00448 21 137 6.4E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 174 229 3.7E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_24810 8e0d41e5bbe5be5194105306419059bc 235 SUPERFAMILY SSF52172 22 155 1.42E-22 T 14-10-2018 IPR011006 CheY-like superfamily PACID_24480 e26d41ee57c2827a22b6a14bcdd3bcae 437 Pfam PF02653 Branched-chain amino acid transport system / permease component 123 402 2.9E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_11390 0f6c1cde7fc60b1348d2b82ec097f2c3 355 Gene3D G3DSA:3.40.50.720 165 299 1.1E-86 T 14-10-2018 PACID_11390 0f6c1cde7fc60b1348d2b82ec097f2c3 355 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 139 1.3E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_11390 0f6c1cde7fc60b1348d2b82ec097f2c3 355 Pfam PF00107 Zinc-binding dehydrogenase 188 315 1.5E-17 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_11390 0f6c1cde7fc60b1348d2b82ec097f2c3 355 SUPERFAMILY SSF51735 154 320 3.29E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_11390 0f6c1cde7fc60b1348d2b82ec097f2c3 355 Gene3D G3DSA:3.90.180.10 21 343 1.1E-86 T 14-10-2018 PACID_11390 0f6c1cde7fc60b1348d2b82ec097f2c3 355 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_11390 0f6c1cde7fc60b1348d2b82ec097f2c3 355 SUPERFAMILY SSF50129 5 185 5.19E-44 T 14-10-2018 IPR011032 GroES-like superfamily PACID_11390 0f6c1cde7fc60b1348d2b82ec097f2c3 355 SMART SM00829 12 351 0.008 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 SMART SM00863 667 711 1.6E-15 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 SUPERFAMILY SSF55186 571 718 8.76E-41 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Gene3D G3DSA:3.30.980.10 571 710 5.7E-38 T 14-10-2018 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Gene3D G3DSA:2.40.30.130 480 566 4.5E-11 T 14-10-2018 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Gene3D G3DSA:3.30.930.10 1 253 8.4E-84 T 14-10-2018 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 311 324 3.6E-24 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 237 250 3.6E-24 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 69 80 3.6E-24 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 287 303 3.6E-24 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 PRINTS PR00980 Alanyl-tRNA synthetase signature 204 215 3.6E-24 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Pfam PF02272 DHHA1 domain 749 887 4.5E-14 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 SUPERFAMILY SSF55681 2 256 1.32E-76 T 14-10-2018 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 SUPERFAMILY SSF50447 468 565 1.17E-15 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Gene3D G3DSA:3.30.54.20 638 692 5.7E-38 T 14-10-2018 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Pfam PF01411 tRNA synthetases class II (A) 5 568 4.8E-177 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 SUPERFAMILY SSF101353 257 454 2.09E-56 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 5 872 5.7E-231 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Gene3D G3DSA:3.10.310.40 781 890 2.9E-17 T 14-10-2018 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 667 711 3.8E-13 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PACID_17800 9483d38d31eca1535c71c03423dfdd61 893 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 893 149.72 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 PACID_23990 17a987409ab179628b9935dac963324b 319 SUPERFAMILY SSF161111 5 227 4.05E-33 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_23990 17a987409ab179628b9935dac963324b 319 Pfam PF01545 Cation efflux family 10 225 9.7E-32 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PACID_23990 17a987409ab179628b9935dac963324b 319 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 7 296 9.7E-34 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PACID_23990 17a987409ab179628b9935dac963324b 319 SUPERFAMILY SSF160240 229 299 6.8E-6 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PACID_23990 17a987409ab179628b9935dac963324b 319 Gene3D G3DSA:1.20.1510.10 6 225 6.2E-32 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_03900 3095cf5aa2b21094bf4c869414ac4b7a 462 SUPERFAMILY SSF103473 20 449 1.05E-28 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_03900 3095cf5aa2b21094bf4c869414ac4b7a 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 442 4.4E-79 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 PACID_03900 3095cf5aa2b21094bf4c869414ac4b7a 462 Gene3D G3DSA:1.20.1250.20 244 450 9.4E-8 T 14-10-2018 PACID_03900 3095cf5aa2b21094bf4c869414ac4b7a 462 Gene3D G3DSA:1.20.1250.20 23 219 5.9E-13 T 14-10-2018 PACID_03900 3095cf5aa2b21094bf4c869414ac4b7a 462 Pfam PF13347 MFS/sugar transport protein 20 446 1.7E-77 T 14-10-2018 PACID_20860 0c3527315093d9d1c20b51dbfa5e0ad3 314 Gene3D G3DSA:2.60.200.30 139 277 5.0E-82 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PACID_20860 0c3527315093d9d1c20b51dbfa5e0ad3 314 Gene3D G3DSA:3.40.50.10330 73 298 5.0E-82 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 PACID_20860 0c3527315093d9d1c20b51dbfa5e0ad3 314 Pfam PF01513 ATP-NAD kinase 73 284 1.6E-54 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PACID_20860 0c3527315093d9d1c20b51dbfa5e0ad3 314 SUPERFAMILY SSF111331 17 306 7.98E-73 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PACID_20860 0c3527315093d9d1c20b51dbfa5e0ad3 314 Hamap MF_00361 NAD kinase [nadK]. 15 300 29.375 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 360 379 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 54 62 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 174 184 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 306 322 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 441 457 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 114 134 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 PRINTS PR00301 70kDa heat shock protein signature 337 357 9.6E-76 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 SUPERFAMILY SSF53067 163 354 3.15E-64 T 14-10-2018 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 Gene3D G3DSA:3.30.420.40 160 339 2.2E-143 T 14-10-2018 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 SUPERFAMILY SSF53067 4 160 1.14E-57 T 14-10-2018 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 168 181 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 4 576 7.4E-278 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 Gene3D G3DSA:2.60.34.10 349 476 2.9E-57 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 Gene3D G3DSA:1.20.1270.10 479 580 4.0E-29 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 Pfam PF00012 Hsp70 protein 4 576 2.3E-240 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 309 323 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 Gene3D G3DSA:3.30.420.40 5 348 2.2E-143 T 14-10-2018 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 SUPERFAMILY SSF100920 356 512 8.5E-60 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 613 36.395 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 Gene3D G3DSA:3.90.640.10 200 281 2.2E-143 T 14-10-2018 PACID_07090 6f763c32e4f319271bb3bc105b77aef7 619 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 Gene3D G3DSA:3.40.250.10 444 534 1.7E-22 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 4.3E-19 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 227 243 4.3E-19 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 4.3E-19 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.3E-19 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 276 4.3E-19 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 1.0E-11 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.0E-11 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 276 1.0E-11 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 228 242 1.0E-11 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 379 394 1.0E-11 T 14-10-2018 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 299 8.1E-52 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 Gene3D G3DSA:3.50.50.60 113 432 4.0E-152 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 SUPERFAMILY SSF55424 317 434 7.39E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 Pfam PF00581 Rhodanese-like domain 449 533 2.2E-11 T 14-10-2018 IPR001763 Rhodanese-like domain PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 SMART SM00450 443 538 7.7E-20 T 14-10-2018 IPR001763 Rhodanese-like domain PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 SUPERFAMILY SSF51905 1 309 1.4E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 326 422 1.1E-13 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 Gene3D G3DSA:3.50.50.60 2 332 4.0E-152 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27410 5ac332be07ea27cd64b45ee5b129a948 540 SUPERFAMILY SSF52821 427 534 1.7E-26 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 SUPERFAMILY SSF52418 73 320 1.05E-81 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 Gene3D G3DSA:3.90.1170.30 323 411 5.0E-133 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 SUPERFAMILY SSF47648 5 73 2.09E-18 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 Pfam PF02885 Glycosyl transferase family, helical bundle domain 8 70 5.5E-14 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 SMART SM00941 337 411 3.3E-29 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 PIRSF PIRSF000478 4 423 1.2E-147 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 114 129 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 Pfam PF00591 Glycosyl transferase family, a/b domain 81 267 3.3E-33 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 338 410 6.7E-20 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 Gene3D G3DSA:1.20.970.10 6 71 6.9E-20 T 14-10-2018 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 8 410 5.6E-166 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 SUPERFAMILY SSF54680 324 418 1.83E-23 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_20570 81d76bde485f63aace23e53ea6088c6c 424 Gene3D G3DSA:3.40.1030.10 81 322 5.0E-133 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_33570 c02b2bae975e4a2edab2225a57dbede0 196 SUPERFAMILY SSF161111 4 181 4.84E-28 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_33570 c02b2bae975e4a2edab2225a57dbede0 196 Pfam PF01545 Cation efflux family 9 178 2.6E-8 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PACID_33570 c02b2bae975e4a2edab2225a57dbede0 196 Gene3D G3DSA:1.20.1510.10 3 183 3.3E-9 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_13010 511471a4815557a688914d13efdc86bb 892 SMART SM00475 4 266 5.0E-119 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 PACID_13010 511471a4815557a688914d13efdc86bb 892 Gene3D G3DSA:1.10.150.20 672 815 2.6E-97 T 14-10-2018 PACID_13010 511471a4815557a688914d13efdc86bb 892 SMART SM00279 178 213 8.5E-10 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 PACID_13010 511471a4815557a688914d13efdc86bb 892 Gene3D G3DSA:1.20.1060.10 506 620 1.3E-30 T 14-10-2018 PACID_13010 511471a4815557a688914d13efdc86bb 892 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 8 174 9.2E-51 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 PACID_13010 511471a4815557a688914d13efdc86bb 892 SUPERFAMILY SSF53098 315 482 4.25E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_13010 511471a4815557a688914d13efdc86bb 892 Gene3D G3DSA:3.30.420.10 311 504 2.5E-25 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 617 639 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 663 686 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 776 787 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 765 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 640 655 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 808 824 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 838 851 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 693 706 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 PRINTS PR00868 DNA-polymerase family A (pol I) signature 717 742 2.0E-73 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 SUPERFAMILY SSF56672 488 890 1.22E-132 T 14-10-2018 PACID_13010 511471a4815557a688914d13efdc86bb 892 Pfam PF00476 DNA polymerase family A 515 888 1.8E-135 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 SUPERFAMILY SSF47807 176 291 1.05E-27 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily PACID_13010 511471a4815557a688914d13efdc86bb 892 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 176 270 4.2E-23 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 PACID_13010 511471a4815557a688914d13efdc86bb 892 Gene3D G3DSA:3.30.70.370 626 887 2.6E-97 T 14-10-2018 PACID_13010 511471a4815557a688914d13efdc86bb 892 SMART SM00474 308 481 6.9E-4 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PACID_13010 511471a4815557a688914d13efdc86bb 892 SMART SM00482 648 855 4.6E-101 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 TIGRFAM TIGR00593 pola: DNA polymerase I 8 890 4.8E-279 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_13010 511471a4815557a688914d13efdc86bb 892 Gene3D G3DSA:3.40.50.1010 8 282 1.2E-85 T 14-10-2018 PACID_13010 511471a4815557a688914d13efdc86bb 892 Gene3D G3DSA:1.10.150.20 179 251 1.2E-85 T 14-10-2018 PACID_13010 511471a4815557a688914d13efdc86bb 892 SUPERFAMILY SSF88723 3 174 3.45E-50 T 14-10-2018 IPR029060 PIN-like domain superfamily PACID_13400 8d643105d68507f9e3a692e66625c7fa 233 SUPERFAMILY SSF53254 6 210 2.57E-51 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_13400 8d643105d68507f9e3a692e66625c7fa 233 Gene3D G3DSA:3.40.50.1240 5 217 8.1E-60 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_13400 8d643105d68507f9e3a692e66625c7fa 233 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 8 190 2.5E-52 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_13400 8d643105d68507f9e3a692e66625c7fa 233 SMART SM00855 7 160 2.3E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_13400 8d643105d68507f9e3a692e66625c7fa 233 PIRSF PIRSF000709 5 163 4.8E-11 T 14-10-2018 PACID_24300 151d7c00c87ed1a1e08c6ac3ba9112ac 271 PIRSF PIRSF000477 4 271 1.3E-77 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 PACID_24300 151d7c00c87ed1a1e08c6ac3ba9112ac 271 Pfam PF01048 Phosphorylase superfamily 31 268 2.4E-39 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PACID_24300 151d7c00c87ed1a1e08c6ac3ba9112ac 271 SUPERFAMILY SSF53167 15 268 1.53E-72 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 PACID_24300 151d7c00c87ed1a1e08c6ac3ba9112ac 271 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 31 268 4.3E-69 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 PACID_24300 151d7c00c87ed1a1e08c6ac3ba9112ac 271 TIGRFAM TIGR01698 PUNP: purine nucleotide phosphorylase 31 268 1.7E-93 T 14-10-2018 IPR011269 Putative purine nucleotide phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 PACID_24300 151d7c00c87ed1a1e08c6ac3ba9112ac 271 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 86 127 - T 14-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 PACID_24300 151d7c00c87ed1a1e08c6ac3ba9112ac 271 Gene3D G3DSA:3.40.50.1580 4 269 6.1E-82 T 14-10-2018 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 409 2.7E-113 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 PIRSF PIRSF000726 57 417 2.0E-124 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 PIRSF PIRSF000726 1 62 4.0E-17 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 SUPERFAMILY SSF53633 3 242 1.31E-72 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 Pfam PF13840 ACT domain 344 403 1.6E-11 T 14-10-2018 IPR027795 CASTOR, ACT domain PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 Pfam PF00696 Amino acid kinase family 3 231 6.3E-57 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 Gene3D G3DSA:3.30.2130.10 250 424 2.0E-61 T 14-10-2018 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 SUPERFAMILY SSF55021 335 412 1.4E-22 T 14-10-2018 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 SUPERFAMILY SSF55021 254 334 2.75E-18 T 14-10-2018 PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 Pfam PF01842 ACT domain 274 316 5.6E-7 T 14-10-2018 IPR002912 ACT domain PACID_06200 e15a4819b56b34fc6ed447e3951cbaf8 424 Gene3D G3DSA:3.40.1160.10 1 249 5.5E-91 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_04800 c81986b54fd06b6e231e2617aac62d5e 304 SUPERFAMILY SSF161098 60 257 1.83E-35 T 14-10-2018 IPR035906 MetI-like superfamily PACID_04800 c81986b54fd06b6e231e2617aac62d5e 304 Gene3D G3DSA:1.10.3720.10 55 272 4.5E-42 T 14-10-2018 IPR035906 MetI-like superfamily PACID_04800 c81986b54fd06b6e231e2617aac62d5e 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 270 8.8E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_04800 c81986b54fd06b6e231e2617aac62d5e 304 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 62 163 4.5E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 PRINTS PR00072 Malic enzyme signature 419 435 4.2E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 PRINTS PR00072 Malic enzyme signature 96 120 4.2E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 PRINTS PR00072 Malic enzyme signature 309 325 4.2E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 PRINTS PR00072 Malic enzyme signature 158 187 4.2E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 PRINTS PR00072 Malic enzyme signature 194 216 4.2E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 PRINTS PR00072 Malic enzyme signature 253 271 4.2E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 PRINTS PR00072 Malic enzyme signature 278 294 4.2E-68 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 Pfam PF03949 Malic enzyme, NAD binding domain 282 540 9.4E-88 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 SUPERFAMILY SSF53223 17 281 1.22E-90 T 14-10-2018 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 PIRSF PIRSF000106 3 571 1.0E-189 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 SUPERFAMILY SSF51735 282 569 2.44E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 Gene3D G3DSA:3.40.50.720 280 571 4.9E-97 T 14-10-2018 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 Pfam PF00390 Malic enzyme, N-terminal domain 91 271 2.5E-62 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 Gene3D G3DSA:3.40.50.10380 24 279 3.7E-90 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 SMART SM01274 90 272 9.1E-80 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PACID_00380 8c08ddb975634929e1724ac67eef38ec 572 SMART SM00919 282 541 9.2E-98 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PACID_19790 05e5dcad369ff4addccc0748b4b9e25d 83 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 1 76 18.553 T 14-10-2018 IPR003482 Transcription factor WhiB PACID_19790 05e5dcad369ff4addccc0748b4b9e25d 83 Pfam PF02467 Transcription factor WhiB 3 71 4.6E-27 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain PACID_13160 faabae3779e23410704c98f33a8cbc00 291 PIRSF PIRSF005052 11 291 3.0E-97 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 PACID_13160 faabae3779e23410704c98f33a8cbc00 291 Pfam PF03668 P-loop ATPase protein family 13 291 8.7E-97 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 PACID_13160 faabae3779e23410704c98f33a8cbc00 291 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 11 290 38.544 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 PACID_13160 faabae3779e23410704c98f33a8cbc00 291 SUPERFAMILY SSF52540 10 161 3.0E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13160 faabae3779e23410704c98f33a8cbc00 291 Gene3D G3DSA:3.40.50.300 8 164 1.2E-5 T 14-10-2018 PACID_04480 31fdbd10ae056d8e3a981cb6d593023b 148 Gene3D G3DSA:1.10.10.10 2 146 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_04480 31fdbd10ae056d8e3a981cb6d593023b 148 SUPERFAMILY SSF46785 14 145 1.44E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_15940 2648964ee32a4a7dafc30b9776884bcd 310 SUPERFAMILY SSF52540 10 157 2.77E-14 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_15940 2648964ee32a4a7dafc30b9776884bcd 310 Gene3D G3DSA:3.40.50.300 13 293 5.7E-83 T 14-10-2018 PACID_15940 2648964ee32a4a7dafc30b9776884bcd 310 SUPERFAMILY SSF52540 6 231 5.78E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_15940 2648964ee32a4a7dafc30b9776884bcd 310 Pfam PF01715 IPP transferase 48 289 1.2E-68 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PACID_15940 2648964ee32a4a7dafc30b9776884bcd 310 Gene3D G3DSA:1.10.20.140 121 190 5.7E-83 T 14-10-2018 PACID_15940 2648964ee32a4a7dafc30b9776884bcd 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 9 305 27.228 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PACID_15940 2648964ee32a4a7dafc30b9776884bcd 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 4.4E-69 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 PACID_13170 4676367aa131a473df9a6920d3f346fe 344 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 35 333 8.0E-81 T 14-10-2018 IPR010119 Gluconeogenesis factor PACID_13170 4676367aa131a473df9a6920d3f346fe 344 Gene3D G3DSA:3.40.50.12300 31 342 3.0E-91 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily PACID_13170 4676367aa131a473df9a6920d3f346fe 344 SUPERFAMILY SSF142338 32 335 1.57E-80 T 14-10-2018 PACID_13170 4676367aa131a473df9a6920d3f346fe 344 Hamap MF_00973 Gluconeogenesis factor. 31 341 30.639 T 14-10-2018 IPR010119 Gluconeogenesis factor PACID_13170 4676367aa131a473df9a6920d3f346fe 344 Pfam PF01933 Uncharacterised protein family UPF0052 35 317 2.0E-68 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 PACID_10320 ad446127054a6d8533e074e328a6d935 144 Gene3D G3DSA:3.40.630.30 14 144 2.0E-17 T 14-10-2018 PACID_10320 ad446127054a6d8533e074e328a6d935 144 Pfam PF00583 Acetyltransferase (GNAT) family 35 128 9.7E-9 T 14-10-2018 IPR000182 GNAT domain PACID_10320 ad446127054a6d8533e074e328a6d935 144 SUPERFAMILY SSF55729 36 136 4.8E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_09780 7e420c1a7abe6fa5eaa96af1d7652149 220 SUPERFAMILY SSF53901 48 173 8.64E-5 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 Pfam PF00005 ABC transporter 380 527 5.4E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 SUPERFAMILY SSF49879 276 352 3.06E-23 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 Gene3D G3DSA:2.60.200.20 259 354 1.2E-22 T 14-10-2018 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 Gene3D G3DSA:2.60.200.20 17 127 3.4E-14 T 14-10-2018 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 Pfam PF00498 FHA domain 280 343 5.5E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 Pfam PF00498 FHA domain 53 103 3.8E-11 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 SMART SM00382 389 573 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 SUPERFAMILY SSF49879 9 103 4.02E-16 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 Gene3D G3DSA:3.40.50.300 358 605 1.0E-65 T 14-10-2018 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 Pfam PF01061 ABC-2 type transporter 644 849 5.9E-15 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 SUPERFAMILY SSF52540 364 590 2.77E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 SMART SM00240 279 329 4.4E-12 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 SMART SM00240 52 102 2.6E-11 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_33100 c6d94cc304ba7f778b754b9232c398c5 912 ProSitePatterns PS00211 ABC transporters family signature. 499 513 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_20890 ccc6af7060d10de2d0c3cda595edadf6 238 SMART SM00382 34 214 1.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_20890 ccc6af7060d10de2d0c3cda595edadf6 238 Pfam PF00005 ABC transporter 34 169 1.9E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_20890 ccc6af7060d10de2d0c3cda595edadf6 238 SUPERFAMILY SSF52540 22 219 1.57E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20890 ccc6af7060d10de2d0c3cda595edadf6 238 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_20890 ccc6af7060d10de2d0c3cda595edadf6 238 Gene3D G3DSA:3.40.50.300 7 236 5.0E-57 T 14-10-2018 PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 5 142 5.9E-61 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 SUPERFAMILY SSF54747 4 74 1.09E-26 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 38 75 4.0E-15 T 14-10-2018 PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 ProSitePatterns PS00359 Ribosomal protein L11 signature. 128 143 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 SUPERFAMILY SSF46906 69 142 1.44E-26 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 SMART SM00649 11 142 3.5E-79 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 7 143 30.245 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 Pfam PF00298 Ribosomal protein L11, RNA binding domain 73 141 6.4E-26 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 Gene3D G3DSA:3.30.1550.10 4 74 5.3E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 68 3.3E-25 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal PACID_25960 cde66e73d98a7751b2428fc523a1495a 143 Gene3D G3DSA:1.10.10.250 75 142 1.1E-30 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily PACID_26400 d808ec4f0c43f2d2ad1d5e8aca8b0424 191 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 39 145 3.4E-24 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26400 d808ec4f0c43f2d2ad1d5e8aca8b0424 191 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 2 152 40.469 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26400 d808ec4f0c43f2d2ad1d5e8aca8b0424 191 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 119 135 - T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26400 d808ec4f0c43f2d2ad1d5e8aca8b0424 191 Gene3D G3DSA:3.40.50.12280 2 173 8.0E-69 T 14-10-2018 PACID_26400 d808ec4f0c43f2d2ad1d5e8aca8b0424 191 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 12 152 2.0E-64 T 14-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26400 d808ec4f0c43f2d2ad1d5e8aca8b0424 191 SUPERFAMILY SSF56770 10 155 8.37E-63 T 14-10-2018 PACID_21710 fec24cad1fc60786f149b341e8d964e8 142 Gene3D G3DSA:1.10.10.60 8 43 2.3E-5 T 14-10-2018 PACID_21710 fec24cad1fc60786f149b341e8d964e8 142 SUPERFAMILY SSF81301 52 142 1.26E-15 T 14-10-2018 PACID_21710 fec24cad1fc60786f149b341e8d964e8 142 Pfam PF01909 Nucleotidyltransferase domain 68 140 5.0E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PACID_21710 fec24cad1fc60786f149b341e8d964e8 142 Gene3D G3DSA:3.30.460.10 49 142 4.6E-19 T 14-10-2018 PACID_11820 9b79d21f6d37d1f6e3e772a6f725d7ed 499 Pfam PF00557 Metallopeptidase family M24 233 472 5.6E-49 T 14-10-2018 IPR000994 Peptidase M24 PACID_11820 9b79d21f6d37d1f6e3e772a6f725d7ed 499 SMART SM01011 58 198 2.7E-36 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PACID_11820 9b79d21f6d37d1f6e3e772a6f725d7ed 499 Pfam PF05195 Aminopeptidase P, N-terminal domain 62 180 3.1E-19 T 14-10-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 PACID_11820 9b79d21f6d37d1f6e3e772a6f725d7ed 499 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 407 419 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site PACID_11820 9b79d21f6d37d1f6e3e772a6f725d7ed 499 Gene3D G3DSA:3.90.230.10 226 497 4.7E-75 T 14-10-2018 PACID_11820 9b79d21f6d37d1f6e3e772a6f725d7ed 499 SUPERFAMILY SSF53092 62 199 7.85E-23 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PACID_11820 9b79d21f6d37d1f6e3e772a6f725d7ed 499 Gene3D G3DSA:3.40.350.10 61 223 7.2E-14 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PACID_11820 9b79d21f6d37d1f6e3e772a6f725d7ed 499 SUPERFAMILY SSF55920 228 494 1.83E-64 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PACID_31540 76a3a909f1acb9b8bdeec39d353a2028 227 SMART SM00862 147 223 2.0E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_31540 76a3a909f1acb9b8bdeec39d353a2028 227 Gene3D G3DSA:3.40.50.2300 2 124 1.2E-31 T 14-10-2018 PACID_31540 76a3a909f1acb9b8bdeec39d353a2028 227 Pfam PF00072 Response regulator receiver domain 6 114 1.5E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_31540 76a3a909f1acb9b8bdeec39d353a2028 227 SMART SM00448 4 114 6.8E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_31540 76a3a909f1acb9b8bdeec39d353a2028 227 SUPERFAMILY SSF52172 4 174 7.68E-36 T 14-10-2018 IPR011006 CheY-like superfamily PACID_31540 76a3a909f1acb9b8bdeec39d353a2028 227 Gene3D G3DSA:1.10.10.10 125 225 1.3E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_31540 76a3a909f1acb9b8bdeec39d353a2028 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 223 3.2E-15 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_25270 59f13453a70b62e75623a0e7bb229192 284 PIRSF PIRSF037395 2 259 2.7E-92 T 14-10-2018 IPR017196 ECF transporter, predicted substrate-specific component UCP037395 PACID_25270 59f13453a70b62e75623a0e7bb229192 284 Pfam PF12822 ECF transporter, substrate-specific component 72 238 1.0E-13 T 14-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 PACID_12750 cab5e75d46bd59b86d57217f3329f7fe 317 Gene3D G3DSA:1.10.8.300 205 310 9.9E-33 T 14-10-2018 PACID_12750 cab5e75d46bd59b86d57217f3329f7fe 317 SUPERFAMILY SSF52540 6 286 5.4E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_12750 cab5e75d46bd59b86d57217f3329f7fe 317 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 42 171 1.2E-62 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PACID_12750 cab5e75d46bd59b86d57217f3329f7fe 317 Gene3D G3DSA:3.40.50.300 4 204 1.8E-42 T 14-10-2018 PACID_12750 cab5e75d46bd59b86d57217f3329f7fe 317 PIRSF PIRSF002849 1 316 9.4E-128 T 14-10-2018 PACID_14410 c703b728693618eaf9f49a75626a8b5e 296 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 64 163 8.1E-18 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PACID_14410 c703b728693618eaf9f49a75626a8b5e 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 269 2.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_14410 c703b728693618eaf9f49a75626a8b5e 296 SUPERFAMILY SSF161098 66 269 1.57E-40 T 14-10-2018 IPR035906 MetI-like superfamily PACID_14410 c703b728693618eaf9f49a75626a8b5e 296 Gene3D G3DSA:1.10.3720.10 58 272 5.2E-52 T 14-10-2018 IPR035906 MetI-like superfamily PACID_33650 c34a6fe7fb2ec51c9f7edca045f0136a 353 Pfam PF00107 Zinc-binding dehydrogenase 203 279 2.5E-14 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_33650 c34a6fe7fb2ec51c9f7edca045f0136a 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 74 137 1.0E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_33650 c34a6fe7fb2ec51c9f7edca045f0136a 353 Gene3D G3DSA:3.40.50.720 176 300 3.2E-82 T 14-10-2018 PACID_33650 c34a6fe7fb2ec51c9f7edca045f0136a 353 Gene3D G3DSA:3.90.180.10 53 348 3.2E-82 T 14-10-2018 PACID_33650 c34a6fe7fb2ec51c9f7edca045f0136a 353 SMART SM00829 55 349 5.8E-15 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_33650 c34a6fe7fb2ec51c9f7edca045f0136a 353 SUPERFAMILY SSF50129 46 197 1.0E-36 T 14-10-2018 IPR011032 GroES-like superfamily PACID_33650 c34a6fe7fb2ec51c9f7edca045f0136a 353 SUPERFAMILY SSF51735 165 286 1.92E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 270 381 3.8E-29 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 SUPERFAMILY SSF53738 253 385 5.49E-32 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 Gene3D G3DSA:3.40.120.10 179 368 4.2E-62 T 14-10-2018 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 Gene3D G3DSA:3.30.310.50 374 471 7.7E-15 T 14-10-2018 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 Gene3D G3DSA:3.40.120.10 266 373 4.2E-62 T 14-10-2018 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 SUPERFAMILY SSF55957 376 462 3.92E-16 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 Gene3D G3DSA:3.40.120.10 1 175 2.4E-49 T 14-10-2018 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 SUPERFAMILY SSF53738 3 190 5.3E-44 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 166 265 4.3E-24 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 245 260 2.3E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 217 230 2.3E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 183 202 2.3E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 2.3E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 139 3.3E-36 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_02200 56e56d117f1aa0e8f56462cbea15d6d4 473 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 469 1.9E-10 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25280 616b913782d6272a115fb232afb09a5b 206 Gene3D G3DSA:2.40.500.20 85 206 6.0E-44 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 94 194 2.1E-34 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 6.8E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 6.8E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 6.8E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 PRINTS PR01703 Manganese superoxide dismutase signature 67 80 6.8E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 PRINTS PR01703 Manganese superoxide dismutase signature 121 129 6.8E-23 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 PIRSF PIRSF000349 1 204 1.9E-78 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 4 84 6.0E-35 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 SUPERFAMILY SSF54719 85 198 8.64E-40 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 SUPERFAMILY SSF46609 3 89 1.31E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_25280 616b913782d6272a115fb232afb09a5b 206 Gene3D G3DSA:1.10.287.990 21 84 2.1E-30 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 SUPERFAMILY SSF55545 9 142 6.8E-22 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 SUPERFAMILY SSF51445 143 498 8.0E-94 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 144 484 5.0E-87 T 14-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 PRINTS PR00738 Glycosyl hydrolase family 20 signature 304 317 1.0E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 PRINTS PR00738 Glycosyl hydrolase family 20 signature 449 465 1.0E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 PRINTS PR00738 Glycosyl hydrolase family 20 signature 234 251 1.0E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 PRINTS PR00738 Glycosyl hydrolase family 20 signature 166 187 1.0E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 PRINTS PR00738 Glycosyl hydrolase family 20 signature 282 300 1.0E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 PRINTS PR00738 Glycosyl hydrolase family 20 signature 137 154 1.0E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 PRINTS PR00738 Glycosyl hydrolase family 20 signature 95 115 1.0E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 PRINTS PR00738 Glycosyl hydrolase family 20 signature 467 484 1.0E-34 T 14-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 Gene3D G3DSA:3.20.20.80 142 484 5.4E-104 T 14-10-2018 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 Gene3D G3DSA:3.30.379.10 9 139 5.8E-26 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 PACID_33320 3e91817c9c75eddde7e9947739f78f66 539 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 15 140 6.6E-19 T 14-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal PACID_25500 cf41966a22340434eb8307f0ffbd9c7f 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 5 146 18.279 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 PACID_25500 cf41966a22340434eb8307f0ffbd9c7f 146 Gene3D G3DSA:3.100.10.10 67 145 1.6E-20 T 14-10-2018 PACID_25500 cf41966a22340434eb8307f0ffbd9c7f 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 3.3E-30 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P PACID_25500 cf41966a22340434eb8307f0ffbd9c7f 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 4 143 4.3E-43 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25500 cf41966a22340434eb8307f0ffbd9c7f 146 SUPERFAMILY SSF52080 6 144 3.01E-38 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 430 612 2.0E-29 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 SUPERFAMILY SSF52922 260 414 5.42E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 SMART SM00890 626 683 1.1E-20 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 749 760 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 693 704 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Gene3D G3DSA:3.40.50.920 259 418 6.9E-57 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 SUPERFAMILY SSF52518 4 258 3.73E-74 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 269 351 5.8E-17 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 965 1077 1.2E-11 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Pfam PF10371 Domain of unknown function 633 680 1.2E-17 T 14-10-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Gene3D G3DSA:3.40.50.970 798 1179 2.1E-149 T 14-10-2018 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 SUPERFAMILY SSF54862 669 840 4.71E-23 T 14-10-2018 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 PIRSF PIRSF000159 1 1184 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Gene3D G3DSA:3.40.50.970 3 258 2.5E-102 T 14-10-2018 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Gene3D G3DSA:3.30.70.20 673 794 3.0E-32 T 14-10-2018 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 SUPERFAMILY SSF53323 421 672 1.83E-73 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 7 1176 0.0 T 14-10-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Gene3D G3DSA:3.40.920.10 421 629 1.6E-78 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 17 243 2.1E-78 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 Pfam PF12838 4Fe-4S dicluster domain 693 761 2.1E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_05170 2a700d3906557bbad8f0a24e50bb8556 1199 SUPERFAMILY SSF52518 797 1180 1.15E-125 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_16650 e5929c399c94c2b036e4afae512e3d24 191 SMART SM00422 33 105 2.4E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_16650 e5929c399c94c2b036e4afae512e3d24 191 SUPERFAMILY SSF46955 38 123 8.79E-15 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PACID_16650 e5929c399c94c2b036e4afae512e3d24 191 Gene3D G3DSA:1.10.1660.10 37 126 6.7E-13 T 14-10-2018 PACID_16650 e5929c399c94c2b036e4afae512e3d24 191 Pfam PF13411 MerR HTH family regulatory protein 39 103 1.1E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 290 5.4E-123 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 Pfam PF00549 CoA-ligase 158 275 3.7E-13 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 SUPERFAMILY SSF51735 2 128 1.34E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 PIRSF PIRSF001553 1 295 1.5E-112 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 Pfam PF02629 CoA binding domain 6 104 7.6E-26 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 240 253 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 Gene3D G3DSA:3.40.50.261 130 292 3.8E-60 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 SUPERFAMILY SSF52210 129 289 1.44E-46 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 SMART SM00881 4 105 6.6E-27 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 292 38.524 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 PRINTS PR01798 Succinyl-CoA synthase signature 87 104 1.4E-35 T 14-10-2018 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 PRINTS PR01798 Succinyl-CoA synthase signature 212 225 1.4E-35 T 14-10-2018 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 PRINTS PR01798 Succinyl-CoA synthase signature 244 261 1.4E-35 T 14-10-2018 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 PRINTS PR01798 Succinyl-CoA synthase signature 181 199 1.4E-35 T 14-10-2018 PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 158 185 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site PACID_24700 1e8980beb9a275c7aab10da834dd49d9 297 Gene3D G3DSA:3.40.50.720 1 129 4.7E-45 T 14-10-2018 PACID_17860 3b609c22f526e5eb8ec139d2b4993cb5 118 SUPERFAMILY SSF55486 4 117 3.4E-34 T 14-10-2018 PACID_17860 3b609c22f526e5eb8ec139d2b4993cb5 118 Pfam PF06262 Zincin-like metallopeptidase 30 117 1.5E-29 T 14-10-2018 IPR010428 Zincin-like metallopeptidase PACID_17860 3b609c22f526e5eb8ec139d2b4993cb5 118 Gene3D G3DSA:3.30.2010.20 1 117 6.0E-37 T 14-10-2018 IPR038555 Zincin-like metallopeptidase superfamily PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 SMART SM00357 304 368 2.1E-4 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 Hamap MF_01884 Transcription termination factor Rho [rho]. 296 668 188.929 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 SMART SM00959 13 50 1.9E-7 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 Gene3D G3DSA:1.10.720.10 12 60 1.3E-5 T 14-10-2018 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 Gene3D G3DSA:2.40.50.140 206 381 2.6E-29 T 14-10-2018 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 Pfam PF07498 Rho termination factor, N-terminal domain 13 47 2.8E-8 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 Gene3D G3DSA:3.40.50.300 382 666 4.1E-120 T 14-10-2018 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 SUPERFAMILY SSF52540 370 620 8.89E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 TIGRFAM TIGR00767 rho: transcription termination factor Rho 12 666 4.0E-187 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 Pfam PF07497 Rho termination factor, RNA-binding domain 304 377 2.1E-26 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 SMART SM00382 419 604 3.8E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 SUPERFAMILY SSF50249 303 377 1.61E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_19680 d080c9e222be04c6d5cc256342dfd385 673 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 409 612 2.3E-17 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_20870 3cbd799b7877eb23025803977b7740fc 244 PIRSF PIRSF005578 2 244 1.7E-80 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 PACID_20870 3cbd799b7877eb23025803977b7740fc 244 Pfam PF01728 FtsJ-like methyltransferase 58 239 1.2E-18 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 PACID_20870 3cbd799b7877eb23025803977b7740fc 244 Gene3D G3DSA:3.10.290.10 3 52 4.9E-10 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PACID_20870 3cbd799b7877eb23025803977b7740fc 244 SMART SM00363 4 67 2.6E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_20870 3cbd799b7877eb23025803977b7740fc 244 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 5 234 1.5E-57 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 PACID_20870 3cbd799b7877eb23025803977b7740fc 244 Gene3D G3DSA:3.40.50.150 53 244 4.4E-69 T 14-10-2018 PACID_20870 3cbd799b7877eb23025803977b7740fc 244 SUPERFAMILY SSF53335 54 239 4.73E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_20870 3cbd799b7877eb23025803977b7740fc 244 SUPERFAMILY SSF55174 4 66 5.0E-15 T 14-10-2018 PACID_20870 3cbd799b7877eb23025803977b7740fc 244 Pfam PF01479 S4 domain 5 51 2.4E-15 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_19340 50ebb31a33dbd703e1da25419da854ad 138 SUPERFAMILY SSF51344 6 87 1.57E-19 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19340 50ebb31a33dbd703e1da25419da854ad 138 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 86 6.0E-12 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19340 50ebb31a33dbd703e1da25419da854ad 138 Gene3D G3DSA:2.60.15.10 2 137 9.8E-26 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19340 50ebb31a33dbd703e1da25419da854ad 138 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 136 16.514 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19340 50ebb31a33dbd703e1da25419da854ad 138 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 86 1.6E-22 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19340 50ebb31a33dbd703e1da25419da854ad 138 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 124 8.6E-26 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_25090 8bcb3b9e509b9fcdaac291d7c2431e5b 117 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 20.276 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PACID_25090 8bcb3b9e509b9fcdaac291d7c2431e5b 117 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 14 72 2.0E-15 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PACID_25090 8bcb3b9e509b9fcdaac291d7c2431e5b 117 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 115 4.1E-17 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PACID_25090 8bcb3b9e509b9fcdaac291d7c2431e5b 117 Gene3D G3DSA:3.90.470.20 1 116 3.3E-34 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PACID_25090 8bcb3b9e509b9fcdaac291d7c2431e5b 117 SUPERFAMILY SSF56214 2 115 3.27E-26 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PACID_25090 8bcb3b9e509b9fcdaac291d7c2431e5b 117 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 110 5.8E-12 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 PACID_25090 8bcb3b9e509b9fcdaac291d7c2431e5b 117 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 115 1.2E-21 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 PACID_28090 f8752105837e57b7cd2988f03af1980a 271 SUPERFAMILY SSF53335 16 159 1.02E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_28090 f8752105837e57b7cd2988f03af1980a 271 Gene3D G3DSA:3.40.50.150 21 238 2.3E-28 T 14-10-2018 PACID_28090 f8752105837e57b7cd2988f03af1980a 271 Pfam PF13489 Methyltransferase domain 28 140 2.6E-10 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 SUPERFAMILY SSF54292 18 96 2.51E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Gene3D G3DSA:3.30.70.20 156 229 3.2E-8 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 47 64 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 170 180 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Pfam PF00384 Molybdopterin oxidoreductase 297 439 1.7E-10 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Gene3D G3DSA:2.20.25.90 241 293 1.8E-8 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Gene3D G3DSA:3.40.50.740 483 688 1.1E-25 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Pfam PF01568 Molydopterin dinucleotide binding domain 744 798 1.8E-6 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 17 98 8.1E-18 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 SMART SM00926 240 294 5.6E-5 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 108 146 1.7E-14 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 SUPERFAMILY SSF50692 721 804 2.71E-7 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Gene3D G3DSA:3.40.50.740 298 466 9.1E-13 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 122 134 - T 14-10-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 SUPERFAMILY SSF54862 100 236 1.84E-32 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Gene3D G3DSA:3.10.20.740 17 146 7.0E-33 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 20 657 3.6E-155 T 14-10-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 Gene3D G3DSA:2.40.40.20 711 818 3.1E-5 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 SUPERFAMILY SSF53706 239 700 2.36E-68 T 14-10-2018 PACID_26350 00ca9252bc576828e26cddfdbb54e0e9 830 SMART SM00929 107 147 6.0E-18 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_25320 85e901dc73a01d7dca72785d4a66b82d 181 Gene3D G3DSA:3.90.1030.10 5 115 6.2E-39 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25320 85e901dc73a01d7dca72785d4a66b82d 181 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 24.058 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25320 85e901dc73a01d7dca72785d4a66b82d 181 TIGRFAM TIGR00059 L17: ribosomal protein bL17 9 116 6.0E-37 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25320 85e901dc73a01d7dca72785d4a66b82d 181 Pfam PF01196 Ribosomal protein L17 21 116 8.3E-33 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25320 85e901dc73a01d7dca72785d4a66b82d 181 SUPERFAMILY SSF64263 1 117 8.37E-41 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21770 a10553e8dcd59c96f74fd9385b5e87af 361 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 11 357 1.0E-143 T 14-10-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 PACID_21770 a10553e8dcd59c96f74fd9385b5e87af 361 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 10 210 3.8E-74 T 14-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 PACID_21770 a10553e8dcd59c96f74fd9385b5e87af 361 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 265 357 2.4E-43 T 14-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 PACID_04660 dc973594fff7a86a12cf2072c89c9fa9 372 Pfam PF13524 Glycosyl transferases group 1 284 361 3.0E-7 T 14-10-2018 PACID_04660 dc973594fff7a86a12cf2072c89c9fa9 372 SUPERFAMILY SSF53756 84 365 4.45E-14 T 14-10-2018 PACID_04660 dc973594fff7a86a12cf2072c89c9fa9 372 Gene3D G3DSA:3.40.50.2000 189 349 3.1E-12 T 14-10-2018 PACID_18840 850dcc17f895d480ced5083037bce05a 591 SUPERFAMILY SSF52200 176 254 6.28E-7 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily PACID_18840 850dcc17f895d480ced5083037bce05a 591 Gene3D G3DSA:3.40.50.10140 171 265 2.7E-10 T 14-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily PACID_18840 850dcc17f895d480ced5083037bce05a 591 Pfam PF14464 Prokaryotic homologs of the JAB domain 13 127 1.3E-10 T 14-10-2018 IPR028090 JAB domain, prokaryotic PACID_18840 850dcc17f895d480ced5083037bce05a 591 Pfam PF13676 TIR domain 176 249 2.3E-10 T 14-10-2018 IPR000157 Toll/interleukin-1 receptor homology (TIR) domain GO:0005515|GO:0007165 PACID_18840 850dcc17f895d480ced5083037bce05a 591 Gene3D G3DSA:3.40.140.10 8 137 9.2E-14 T 14-10-2018 PACID_18840 850dcc17f895d480ced5083037bce05a 591 SUPERFAMILY SSF102712 9 109 1.57E-7 T 14-10-2018 PACID_30060 2039d39131403e88718c40c262c21373 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 217 3.4E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_30060 2039d39131403e88718c40c262c21373 220 SMART SM00862 149 217 1.4E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_30060 2039d39131403e88718c40c262c21373 220 SMART SM00448 6 115 5.8E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_30060 2039d39131403e88718c40c262c21373 220 Gene3D G3DSA:1.10.10.10 131 219 7.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_30060 2039d39131403e88718c40c262c21373 220 Gene3D G3DSA:3.40.50.12740 5 130 2.3E-33 T 14-10-2018 PACID_30060 2039d39131403e88718c40c262c21373 220 Pfam PF00072 Response regulator receiver domain 9 115 5.0E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_30060 2039d39131403e88718c40c262c21373 220 SUPERFAMILY SSF46894 149 217 4.54E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_30060 2039d39131403e88718c40c262c21373 220 SUPERFAMILY SSF52172 4 121 1.04E-34 T 14-10-2018 IPR011006 CheY-like superfamily PACID_08410 27ea642f2e737b59ee8575233595a461 480 SUPERFAMILY SSF52374 4 311 1.05E-84 T 14-10-2018 PACID_08410 27ea642f2e737b59ee8575233595a461 480 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 310 7.5E-113 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 SMART SM00840 356 418 2.5E-11 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 Pfam PF09190 DALR domain 357 409 2.4E-9 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 Gene3D G3DSA:1.20.120.640 317 479 5.5E-33 T 14-10-2018 PACID_08410 27ea642f2e737b59ee8575233595a461 480 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 8.1E-24 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 196 214 8.1E-24 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 8.1E-24 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 227 248 8.1E-24 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 480 34.465 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 4 478 4.6E-131 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 PACID_08410 27ea642f2e737b59ee8575233595a461 480 SUPERFAMILY SSF47323 350 478 1.11E-30 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_08410 27ea642f2e737b59ee8575233595a461 480 Gene3D G3DSA:3.40.50.620 1 309 7.1E-122 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_30430 ed4dec24f90fe4291e3d9074dbddd2cb 391 SUPERFAMILY SSF53383 22 389 1.41E-65 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_30430 ed4dec24f90fe4291e3d9074dbddd2cb 391 Pfam PF00155 Aminotransferase class I and II 51 371 6.2E-23 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_30430 ed4dec24f90fe4291e3d9074dbddd2cb 391 Gene3D G3DSA:3.90.1150.10 22 383 2.2E-113 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_30430 ed4dec24f90fe4291e3d9074dbddd2cb 391 Gene3D G3DSA:3.40.640.10 59 286 2.2E-113 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_21350 5f86fd5dc724d609dc145a93d336ceb8 177 SUPERFAMILY SSF50447 7 88 2.47E-15 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_21350 5f86fd5dc724d609dc145a93d336ceb8 177 Pfam PF01782 RimM N-terminal domain 9 87 5.9E-20 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 PACID_21350 5f86fd5dc724d609dc145a93d336ceb8 177 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 6 168 21.309 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PACID_21350 5f86fd5dc724d609dc145a93d336ceb8 177 Gene3D G3DSA:2.30.30.240 95 173 3.9E-13 T 14-10-2018 PACID_21350 5f86fd5dc724d609dc145a93d336ceb8 177 Gene3D G3DSA:2.40.30.60 6 93 3.8E-18 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 PACID_21350 5f86fd5dc724d609dc145a93d336ceb8 177 SUPERFAMILY SSF50346 99 166 1.04E-16 T 14-10-2018 IPR011033 PRC-barrel-like superfamily PACID_21350 5f86fd5dc724d609dc145a93d336ceb8 177 Pfam PF05239 PRC-barrel domain 97 165 3.4E-9 T 14-10-2018 IPR027275 PRC-barrel domain PACID_21350 5f86fd5dc724d609dc145a93d336ceb8 177 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 7 164 1.9E-37 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 PACID_05540 adb0740cfd9ffe1b5b06114220aface7 261 SMART SM00345 8 72 3.6E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_05540 adb0740cfd9ffe1b5b06114220aface7 261 Gene3D G3DSA:1.20.120.530 76 209 9.1E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PACID_05540 adb0740cfd9ffe1b5b06114220aface7 261 SUPERFAMILY SSF48008 78 210 2.54E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PACID_05540 adb0740cfd9ffe1b5b06114220aface7 261 Pfam PF07729 FCD domain 82 202 7.8E-24 T 14-10-2018 IPR011711 GntR, C-terminal PACID_05540 adb0740cfd9ffe1b5b06114220aface7 261 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 55 2.7E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_05540 adb0740cfd9ffe1b5b06114220aface7 261 SUPERFAMILY SSF46785 4 98 9.46E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_05540 adb0740cfd9ffe1b5b06114220aface7 261 SMART SM00895 82 204 5.1E-20 T 14-10-2018 IPR011711 GntR, C-terminal PACID_05540 adb0740cfd9ffe1b5b06114220aface7 261 Gene3D G3DSA:1.10.10.10 1 63 3.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_23810 cd4c813bde999843c903aa5385d63a40 475 SUPERFAMILY SSF100879 250 350 1.02E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PACID_23810 cd4c813bde999843c903aa5385d63a40 475 Gene3D G3DSA:1.10.150.20 181 248 2.4E-16 T 14-10-2018 PACID_23810 cd4c813bde999843c903aa5385d63a40 475 Pfam PF00817 impB/mucB/samB family 10 160 7.3E-39 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PACID_23810 cd4c813bde999843c903aa5385d63a40 475 Hamap MF_01113 DNA polymerase IV [dinB]. 4 361 33.408 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 PACID_23810 cd4c813bde999843c903aa5385d63a40 475 Gene3D G3DSA:3.30.70.270 75 169 9.2E-24 T 14-10-2018 PACID_23810 cd4c813bde999843c903aa5385d63a40 475 Gene3D G3DSA:2.30.40.20 15 74 8.3E-25 T 14-10-2018 PACID_23810 cd4c813bde999843c903aa5385d63a40 475 SUPERFAMILY SSF56672 5 246 8.9E-64 T 14-10-2018 PACID_23810 cd4c813bde999843c903aa5385d63a40 475 Pfam PF11799 impB/mucB/samB family C-terminal domain 245 354 1.1E-20 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PACID_23810 cd4c813bde999843c903aa5385d63a40 475 Gene3D G3DSA:3.30.1490.100 249 361 1.4E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PACID_13880 4eee235ab2d63c0c4feed28a75a60ce2 319 SUPERFAMILY SSF51604 71 286 6.03E-49 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PACID_13880 4eee235ab2d63c0c4feed28a75a60ce2 319 Pfam PF13378 Enolase C-terminal domain-like 90 286 4.2E-34 T 14-10-2018 IPR029065 Enolase C-terminal domain-like PACID_13880 4eee235ab2d63c0c4feed28a75a60ce2 319 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 3 306 22.439 T 14-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 PACID_13880 4eee235ab2d63c0c4feed28a75a60ce2 319 Gene3D G3DSA:3.30.390.10 12 310 3.5E-124 T 14-10-2018 IPR029017 Enolase-like, N-terminal PACID_13880 4eee235ab2d63c0c4feed28a75a60ce2 319 Gene3D G3DSA:3.20.20.120 65 291 3.5E-124 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PACID_13880 4eee235ab2d63c0c4feed28a75a60ce2 319 SMART SM00922 82 181 6.1E-21 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 SUPERFAMILY SSF52518 6 269 9.56E-81 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 SMART SM00861 317 480 7.9E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 SUPERFAMILY SSF52518 307 482 8.34E-51 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 Gene3D G3DSA:3.40.50.920 491 622 1.3E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 SUPERFAMILY SSF52922 486 621 1.11E-31 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 Pfam PF02780 Transketolase, C-terminal domain 493 613 7.7E-29 T 14-10-2018 IPR033248 Transketolase, C-terminal domain PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 Pfam PF02779 Transketolase, pyrimidine binding domain 316 479 1.2E-33 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 18 270 8.3E-47 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 Gene3D G3DSA:3.40.50.970 292 488 6.0E-60 T 14-10-2018 PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 Gene3D G3DSA:3.40.50.970 7 286 6.9E-93 T 14-10-2018 PACID_04310 7c5ce635d06ae42c84ab95624d75dda5 622 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 Gene3D G3DSA:2.70.210.12 3 161 1.7E-50 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 SUPERFAMILY SSF52540 164 340 3.72E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 SUPERFAMILY SSF102741 359 436 5.23E-16 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 Gene3D G3DSA:3.40.50.300 163 345 1.6E-48 T 14-10-2018 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 360 435 5.0E-23 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 ProSitePatterns PS00905 GTP1/OBG family signature. 215 228 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 SUPERFAMILY SSF82051 6 161 4.71E-49 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 Pfam PF01926 50S ribosome-binding GTPase 164 286 7.3E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 Pfam PF09269 Domain of unknown function (DUF1967) 360 435 2.1E-19 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 230 248 1.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 228 1.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 186 204 1.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 165 185 1.8E-34 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 Hamap MF_01454 GTPase Obg [obg]. 5 333 43.912 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 6 329 2.0E-124 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 Gene3D G3DSA:2.40.240.60 363 438 1.3E-15 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily PACID_13340 abe43a22d50e41fa8916465a62e1613f 507 Pfam PF01018 GTP1/OBG 7 161 4.4E-52 T 14-10-2018 IPR006169 GTP1/OBG domain PACID_00590 a73a5ae03e1296016f45ba83397f5c73 499 Gene3D G3DSA:3.40.50.300 279 463 2.6E-6 T 14-10-2018 PACID_00590 a73a5ae03e1296016f45ba83397f5c73 499 SUPERFAMILY SSF52540 355 460 4.4E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_00590 a73a5ae03e1296016f45ba83397f5c73 499 Pfam PF00005 ABC transporter 20 161 2.1E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_00590 a73a5ae03e1296016f45ba83397f5c73 499 SUPERFAMILY SSF52540 2 209 5.23E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_00590 a73a5ae03e1296016f45ba83397f5c73 499 Gene3D G3DSA:3.40.50.300 1 226 2.0E-29 T 14-10-2018 PACID_16960 81fc8f75085c630d4c18d53c981fcd99 505 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 1 485 14.913 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PACID_16960 81fc8f75085c630d4c18d53c981fcd99 505 Gene3D G3DSA:3.60.110.10 226 462 1.2E-10 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PACID_16960 81fc8f75085c630d4c18d53c981fcd99 505 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 54 444 4.0E-63 T 14-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 PACID_16960 81fc8f75085c630d4c18d53c981fcd99 505 SUPERFAMILY SSF56317 203 467 4.45E-26 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PACID_16960 81fc8f75085c630d4c18d53c981fcd99 505 Pfam PF00795 Carbon-nitrogen hydrolase 313 431 9.4E-9 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PACID_25360 8be86ffe9d8e6732b34326c6d4ccd931 135 PIRSF PIRSF002131 6 135 1.5E-52 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PACID_25360 8be86ffe9d8e6732b34326c6d4ccd931 135 Gene3D G3DSA:3.30.420.80 8 135 7.7E-53 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25360 8be86ffe9d8e6732b34326c6d4ccd931 135 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 6 135 33.503 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PACID_25360 8be86ffe9d8e6732b34326c6d4ccd931 135 Pfam PF00411 Ribosomal protein S11 25 134 1.4E-47 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 PACID_25360 8be86ffe9d8e6732b34326c6d4ccd931 135 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 16 132 8.9E-57 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25360 8be86ffe9d8e6732b34326c6d4ccd931 135 ProSitePatterns PS00054 Ribosomal protein S11 signature. 103 125 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site PACID_25360 8be86ffe9d8e6732b34326c6d4ccd931 135 SUPERFAMILY SSF53137 20 135 4.36E-48 T 14-10-2018 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 SUPERFAMILY SSF69055 267 357 3.27E-27 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 356 42.611 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 PIRSF PIRSF006205 1 56 5.6E-15 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 PIRSF PIRSF006205 52 360 2.2E-120 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 Pfam PF13288 DXP reductoisomerase C-terminal domain 236 351 3.2E-35 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 SUPERFAMILY SSF51735 2 124 2.32E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 Gene3D G3DSA:3.40.50.720 1 124 7.6E-37 T 14-10-2018 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 63 2.2E-16 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 57 354 1.1E-96 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 120 203 4.0E-36 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 Gene3D G3DSA:1.10.1740.10 276 360 4.7E-26 T 14-10-2018 PACID_22270 74894084d7d7c5328906d75c8e86ae2f 360 SUPERFAMILY SSF55347 102 238 2.29E-52 T 14-10-2018 PACID_19520 26aca4abf93b5290a18a3e67677ee8f3 618 Pfam PF13537 Glutamine amidotransferase domain 46 161 2.3E-36 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PACID_19520 26aca4abf93b5290a18a3e67677ee8f3 618 SUPERFAMILY SSF56235 1 219 1.54E-58 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_19520 26aca4abf93b5290a18a3e67677ee8f3 618 Gene3D G3DSA:3.60.20.10 5 179 2.4E-53 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_19520 26aca4abf93b5290a18a3e67677ee8f3 618 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 540 2.2E-131 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PACID_19520 26aca4abf93b5290a18a3e67677ee8f3 618 SUPERFAMILY SSF52402 227 598 3.94E-83 T 14-10-2018 PACID_19520 26aca4abf93b5290a18a3e67677ee8f3 618 Pfam PF00733 Asparagine synthase 236 605 8.6E-98 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PACID_19520 26aca4abf93b5290a18a3e67677ee8f3 618 PIRSF PIRSF001589 1 617 6.8E-163 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PACID_27610 2c48f7480c395ecb8a132843577bccdf 337 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 333 2.9E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_27610 2c48f7480c395ecb8a132843577bccdf 337 Gene3D G3DSA:1.10.3720.10 83 335 1.6E-33 T 14-10-2018 IPR035906 MetI-like superfamily PACID_27610 2c48f7480c395ecb8a132843577bccdf 337 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 30 333 2.1E-81 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 PACID_27610 2c48f7480c395ecb8a132843577bccdf 337 SUPERFAMILY SSF161098 43 326 4.97E-34 T 14-10-2018 IPR035906 MetI-like superfamily PACID_15070 310af33df7d1c8c5dfbd71a513c1e9f8 443 SUPERFAMILY SSF51556 63 376 6.81E-96 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_15070 310af33df7d1c8c5dfbd71a513c1e9f8 443 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 26 430 1.6E-107 T 14-10-2018 PACID_15070 310af33df7d1c8c5dfbd71a513c1e9f8 443 ProSitePatterns PS00483 Dihydroorotase signature 2. 311 322 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15070 310af33df7d1c8c5dfbd71a513c1e9f8 443 Gene3D G3DSA:3.20.20.140 64 376 4.9E-122 T 14-10-2018 PACID_15070 310af33df7d1c8c5dfbd71a513c1e9f8 443 Hamap MF_00220_B Dihydroorotase [pyrC]. 9 432 39.434 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15070 310af33df7d1c8c5dfbd71a513c1e9f8 443 Gene3D G3DSA:2.30.40.10 24 429 4.9E-122 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_15070 310af33df7d1c8c5dfbd71a513c1e9f8 443 SUPERFAMILY SSF51338 6 431 1.95E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_15070 310af33df7d1c8c5dfbd71a513c1e9f8 443 Pfam PF01979 Amidohydrolase family 60 429 2.2E-35 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PACID_07920 28fb7591f0df891adf5982cc6d34b689 120 Gene3D G3DSA:2.60.40.1240 4 111 1.6E-5 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily PACID_30740 7ef1fee0a058f19720b9d053945f300d 673 Gene3D G3DSA:2.120.10.30 5 207 4.0E-16 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PACID_30740 7ef1fee0a058f19720b9d053945f300d 673 SUPERFAMILY SSF53474 431 672 2.22E-58 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_30740 7ef1fee0a058f19720b9d053945f300d 673 SUPERFAMILY SSF82171 11 393 1.44E-19 T 14-10-2018 PACID_30740 7ef1fee0a058f19720b9d053945f300d 673 Gene3D G3DSA:3.40.50.1820 427 673 5.5E-65 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_30740 7ef1fee0a058f19720b9d053945f300d 673 Pfam PF00326 Prolyl oligopeptidase family 462 672 7.1E-43 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 PACID_30740 7ef1fee0a058f19720b9d053945f300d 673 Pfam PF07676 WD40-like Beta Propeller Repeat 67 85 0.14 T 14-10-2018 IPR011659 WD40-like Beta Propeller PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 14 254 3.4E-41 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 SUPERFAMILY SSF53067 258 446 4.42E-40 T 14-10-2018 PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 442 2.0E-25 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 Gene3D G3DSA:3.30.420.40 10 255 1.3E-85 T 14-10-2018 PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 Gene3D G3DSA:3.30.420.40 257 447 2.2E-58 T 14-10-2018 PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 SUPERFAMILY SSF53067 14 255 3.6E-45 T 14-10-2018 PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 PIRSF PIRSF000538 12 447 3.6E-73 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_03470 dfc1bb4157e07a088d68124ce35ed1fa 447 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 356 377 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_08970 e670564cc9576913543a24b08b7c79e0 188 PIRSF PIRSF006135 14 188 4.2E-55 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 PACID_08970 e670564cc9576913543a24b08b7c79e0 188 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 17 185 5.5E-58 T 14-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 PACID_08970 e670564cc9576913543a24b08b7c79e0 188 Gene3D G3DSA:3.40.50.300 16 187 2.5E-54 T 14-10-2018 PACID_08970 e670564cc9576913543a24b08b7c79e0 188 SUPERFAMILY SSF52540 17 186 1.24E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 SUPERFAMILY SSF52343 197 338 5.5E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 86 2.7E-11 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 217 236 3.0E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 59 69 3.0E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 158 165 3.0E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 308 316 3.0E-6 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 43 51 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 SUPERFAMILY SSF63380 108 204 1.79E-20 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 Gene3D G3DSA:2.40.30.10 100 204 1.3E-23 T 14-10-2018 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 SUPERFAMILY SSF54292 9 96 1.57E-17 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 Gene3D G3DSA:3.40.50.80 208 345 2.3E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 201 210 1.6E-21 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 308 316 1.6E-21 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 158 165 1.6E-21 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 217 236 1.6E-21 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 PRINTS PR00410 Phenol hydroxylase reductase family signature 141 153 1.6E-21 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 Pfam PF00970 Oxidoreductase FAD-binding domain 111 206 6.3E-15 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 Gene3D G3DSA:3.10.20.30 3 98 4.2E-17 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PACID_02640 ea444dad614bda5096d3b90fffc3a450 345 Pfam PF00175 Oxidoreductase NAD-binding domain 218 322 6.5E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 Pfam PF02142 MGS-like domain 22 132 6.0E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 PIRSF PIRSF000414 1 516 9.4E-188 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 Pfam PF01808 AICARFT/IMPCHase bienzyme 138 450 2.0E-109 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 SMART SM00851 19 133 1.8E-45 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 SMART SM00798 138 451 4.7E-182 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 Gene3D G3DSA:3.40.140.20 210 363 7.5E-57 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 516 40.582 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 Gene3D G3DSA:3.40.50.1380 1 198 4.4E-83 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 SUPERFAMILY SSF52335 7 196 2.75E-61 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 Gene3D G3DSA:3.40.140.20 387 516 2.8E-50 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 516 2.1E-165 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_24620 0a307d043489f04837a6eda34eb6f21c 516 SUPERFAMILY SSF53927 215 516 1.3E-113 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PACID_01770 57a8205dd8a5257fab38a1f338ed0b94 421 Pfam PF07687 Peptidase dimerisation domain 194 283 1.4E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_01770 57a8205dd8a5257fab38a1f338ed0b94 421 SUPERFAMILY SSF53187 32 398 2.63E-50 T 14-10-2018 PACID_01770 57a8205dd8a5257fab38a1f338ed0b94 421 Gene3D G3DSA:3.30.70.360 190 307 1.1E-113 T 14-10-2018 PACID_01770 57a8205dd8a5257fab38a1f338ed0b94 421 Gene3D G3DSA:3.40.630.10 43 384 1.1E-113 T 14-10-2018 PACID_01770 57a8205dd8a5257fab38a1f338ed0b94 421 SUPERFAMILY SSF55031 193 296 4.45E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PACID_01770 57a8205dd8a5257fab38a1f338ed0b94 421 PIRSF PIRSF037226 20 411 4.9E-117 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted PACID_01770 57a8205dd8a5257fab38a1f338ed0b94 421 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 42 367 1.2E-58 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 PACID_17640 5e146b14f5c900480c511183f79f9109 270 Gene3D G3DSA:1.10.8.50 131 270 4.7E-31 T 14-10-2018 PACID_17640 5e146b14f5c900480c511183f79f9109 270 SUPERFAMILY SSF57716 219 269 2.68E-8 T 14-10-2018 PACID_17640 5e146b14f5c900480c511183f79f9109 270 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 102 8.8E-9 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PACID_17640 5e146b14f5c900480c511183f79f9109 270 SMART SM00898 2 115 2.3E-20 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PACID_17640 5e146b14f5c900480c511183f79f9109 270 SUPERFAMILY SSF81624 2 138 7.46E-22 T 14-10-2018 IPR035937 MutM-like, N-terminal PACID_17640 5e146b14f5c900480c511183f79f9109 270 SMART SM01232 129 219 1.4E-27 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PACID_17640 5e146b14f5c900480c511183f79f9109 270 Gene3D G3DSA:3.20.190.10 2 128 9.2E-21 T 14-10-2018 IPR035937 MutM-like, N-terminal PACID_17640 5e146b14f5c900480c511183f79f9109 270 SUPERFAMILY SSF46946 129 196 2.5E-18 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PACID_17640 5e146b14f5c900480c511183f79f9109 270 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 202 5.3E-12 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 SUPERFAMILY SSF53807 55 546 6.67E-56 T 14-10-2018 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 Gene3D G3DSA:3.40.50.1980 47 152 7.0E-17 T 14-10-2018 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 233 275 2.8E-13 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 PRINTS PR00690 Adhesin family signature 56 74 5.9E-5 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 PRINTS PR00690 Adhesin family signature 87 100 5.9E-5 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 Gene3D G3DSA:3.40.50.1980 428 546 1.5E-27 T 14-10-2018 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 Gene3D G3DSA:3.40.50.1980 347 427 2.4E-12 T 14-10-2018 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 TIGRFAM TIGR03772 anch_rpt_subst: anchored repeat ABC transporter, substrate-binding protein 58 545 2.0E-214 T 14-10-2018 IPR022434 ABC transporter, LPXTG-anchor lipoprotein, actinobacteria PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 PRINTS PR00691 Adhesin B signature 81 99 6.4E-7 T 14-10-2018 IPR006129 Adhesin B GO:0007155 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 PRINTS PR00691 Adhesin B signature 56 77 6.4E-7 T 14-10-2018 IPR006129 Adhesin B GO:0007155 PACID_27780 c3a4f21f77a74cf6e17f561caf9c98e4 547 Pfam PF01297 Zinc-uptake complex component A periplasmic 59 542 6.5E-70 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 384 76.419 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 Gene3D G3DSA:3.30.465.10 121 269 5.3E-39 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 SUPERFAMILY SSF56194 258 383 7.46E-31 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 Pfam PF01565 FAD binding domain 64 188 2.2E-20 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 Gene3D G3DSA:3.30.43.10 46 115 4.1E-21 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 258 382 4.0E-36 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 Gene3D G3DSA:3.90.78.10 276 384 4.4E-33 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 SUPERFAMILY SSF56176 50 229 6.07E-37 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PACID_26010 9d3727fc01b4312ca8784e7847dd5118 384 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 51 383 1.6E-46 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_31680 a7da77fa05539b04be33a546f15a6152 246 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 107 219 5.6E-15 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PACID_31680 a7da77fa05539b04be33a546f15a6152 246 SUPERFAMILY SSF55846 99 223 7.33E-24 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PACID_31680 a7da77fa05539b04be33a546f15a6152 246 SMART SM00644 100 230 1.9E-8 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PACID_31680 a7da77fa05539b04be33a546f15a6152 246 Gene3D G3DSA:3.40.80.10 93 236 4.2E-24 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PACID_29440 27b1d569434287355ffcb36e229fdc3a 241 Gene3D G3DSA:3.30.1600.10 28 165 2.6E-74 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily PACID_29440 27b1d569434287355ffcb36e229fdc3a 241 SUPERFAMILY SSF52467 2 238 4.78E-80 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PACID_29440 27b1d569434287355ffcb36e229fdc3a 241 Pfam PF02146 Sir2 family 19 195 2.4E-50 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 PACID_29440 27b1d569434287355ffcb36e229fdc3a 241 Gene3D G3DSA:3.40.50.1220 11 235 2.6E-74 T 14-10-2018 PACID_29440 27b1d569434287355ffcb36e229fdc3a 241 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 3 238 61.063 T 14-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 Gene3D G3DSA:1.20.200.10 141 408 8.6E-106 T 14-10-2018 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 Pfam PF00206 Lyase 11 343 1.4E-97 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 1.3E-28 T 14-10-2018 IPR000362 Fumarate lyase family PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 1.3E-28 T 14-10-2018 IPR000362 Fumarate lyase family PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 1.3E-28 T 14-10-2018 IPR000362 Fumarate lyase family PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 1.3E-28 T 14-10-2018 IPR000362 Fumarate lyase family PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 SUPERFAMILY SSF48557 2 457 1.77E-138 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 Pfam PF10415 Fumarase C C-terminus 409 460 2.3E-13 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 9.9E-5 T 14-10-2018 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 PRINTS PR00145 Argininosuccinate lyase family signature 135 157 9.9E-5 T 14-10-2018 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 9.9E-5 T 14-10-2018 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 Gene3D G3DSA:1.10.275.10 4 140 3.9E-57 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 468 2.7E-218 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 PACID_06740 944c5231492e1c4b90ae44c033ffa854 482 Gene3D G3DSA:1.10.40.30 409 458 2.8E-20 T 14-10-2018 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 Gene3D G3DSA:3.40.50.1980 237 354 1.2E-106 T 14-10-2018 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 35 431 1.3E-137 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 Pfam PF00815 Histidinol dehydrogenase 21 431 1.9E-150 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 233 265 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PRINTS PR00083 Histidinol dehydrogenase signature 233 254 2.6E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PRINTS PR00083 Histidinol dehydrogenase signature 325 350 2.6E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 2.6E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PRINTS PR00083 Histidinol dehydrogenase signature 136 162 2.6E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PRINTS PR00083 Histidinol dehydrogenase signature 173 199 2.6E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PRINTS PR00083 Histidinol dehydrogenase signature 204 229 2.6E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PRINTS PR00083 Histidinol dehydrogenase signature 255 274 2.6E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PRINTS PR00083 Histidinol dehydrogenase signature 366 384 2.6E-79 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 Gene3D G3DSA:3.40.50.1980 31 235 1.2E-106 T 14-10-2018 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 PIRSF PIRSF000099 1 434 1.3E-147 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 5 432 37.803 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 PACID_18100 40f00662d629c694ad19e4ce79b77c8f 434 SUPERFAMILY SSF53720 12 431 1.24E-69 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_07370 def2f8c28a5bc7103c7ff27f85394d3b 265 SUPERFAMILY SSF161098 5 265 7.06E-64 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07370 def2f8c28a5bc7103c7ff27f85394d3b 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 259 8.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_07370 def2f8c28a5bc7103c7ff27f85394d3b 265 Gene3D G3DSA:1.10.3720.10 1 253 3.5E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31240 c3190e47484133ca6de804645de35ffc 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 78 3.7E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_31240 c3190e47484133ca6de804645de35ffc 232 SUPERFAMILY SSF48008 84 221 3.4E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PACID_31240 c3190e47484133ca6de804645de35ffc 232 Pfam PF07729 FCD domain 88 209 7.8E-14 T 14-10-2018 IPR011711 GntR, C-terminal PACID_31240 c3190e47484133ca6de804645de35ffc 232 Gene3D G3DSA:1.20.120.530 82 225 6.3E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PACID_31240 c3190e47484133ca6de804645de35ffc 232 SUPERFAMILY SSF46785 15 82 7.1E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_31240 c3190e47484133ca6de804645de35ffc 232 SMART SM00345 20 78 3.5E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_31240 c3190e47484133ca6de804645de35ffc 232 SMART SM00895 88 212 1.4E-8 T 14-10-2018 IPR011711 GntR, C-terminal PACID_31240 c3190e47484133ca6de804645de35ffc 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 1.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_31240 c3190e47484133ca6de804645de35ffc 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 1.3E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_31240 c3190e47484133ca6de804645de35ffc 232 Gene3D G3DSA:1.10.10.10 10 79 1.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 Gene3D G3DSA:3.40.50.300 254 446 1.3E-51 T 14-10-2018 PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 SUPERFAMILY SSF52540 217 432 5.54E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 Gene3D G3DSA:3.90.1570.50 99 252 2.4E-21 T 14-10-2018 PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 Pfam PF04851 Type III restriction enzyme, res subunit 254 426 2.1E-18 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 SMART SM00487 259 463 1.6E-10 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 198 3.7E-32 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 Gene3D G3DSA:3.40.50.300 448 709 1.0E-40 T 14-10-2018 PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 SUPERFAMILY SSF52540 275 692 4.78E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17380 236b66b7b3198527460079fe4833c9ed 1032 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 21 703 1.1E-158 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 Gene3D G3DSA:1.10.1660.10 1 110 3.6E-24 T 14-10-2018 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 Pfam PF13411 MerR HTH family regulatory protein 2 68 4.9E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 3.7E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.7E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 3.7E-7 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 SMART SM00422 1 70 1.4E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 Gene3D G3DSA:1.25.10.10 262 341 2.1E-7 T 14-10-2018 IPR011989 Armadillo-like helical PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 Gene3D G3DSA:1.25.10.10 111 258 2.2E-6 T 14-10-2018 IPR011989 Armadillo-like helical PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 SUPERFAMILY SSF46955 1 100 5.13E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 SUPERFAMILY SSF48371 119 338 3.84E-17 T 14-10-2018 IPR016024 Armadillo-type fold PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 SMART SM00567 E-Z type HEAT repeats 299 328 0.014 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PACID_09680 3eec9ede85ef53c844c9e661c33d4871 341 SMART SM00567 E-Z type HEAT repeats 194 223 39.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 PACID_22380 17b2df3c34dc1fef14a92d0d995ee6d2 148 Pfam PF13673 Acetyltransferase (GNAT) domain 33 147 1.9E-17 T 14-10-2018 IPR000182 GNAT domain PACID_22380 17b2df3c34dc1fef14a92d0d995ee6d2 148 Gene3D G3DSA:3.40.630.30 9 146 7.1E-32 T 14-10-2018 PACID_22380 17b2df3c34dc1fef14a92d0d995ee6d2 148 SUPERFAMILY SSF55729 17 147 2.36E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 SUPERFAMILY SSF53732 3 620 3.01E-220 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 Gene3D G3DSA:3.30.499.10 368 583 5.5E-92 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 Pfam PF00694 Aconitase C-terminal domain 686 814 6.7E-44 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 30 887 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 Gene3D G3DSA:3.30.499.20 7 367 2.5E-154 T 14-10-2018 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 Gene3D G3DSA:3.20.19.10 646 889 7.2E-100 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 ProSitePatterns PS01244 Aconitase family signature 2. 486 499 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 288 301 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 367 381 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 165 173 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 198 211 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 274 287 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 424 435 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 486 499 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 212 227 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 PRINTS PR00415 Aconitase family signature 141 154 1.0E-41 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 Gene3D G3DSA:1.10.1440.20 584 644 3.5E-17 T 14-10-2018 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 Pfam PF00330 Aconitase family (aconitate hydratase) 64 555 1.4E-178 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 SUPERFAMILY SSF52016 624 887 1.69E-80 T 14-10-2018 PACID_16330 ae0e38cf739f08da9b544d487aeec84a 891 ProSitePatterns PS00450 Aconitase family signature 1. 420 436 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 SUPERFAMILY SSF52172 13 138 1.57E-30 T 14-10-2018 IPR011006 CheY-like superfamily PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 SMART SM00448 12 126 4.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 Gene3D G3DSA:3.40.50.12740 12 225 2.0E-58 T 14-10-2018 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 Pfam PF00072 Response regulator receiver domain 14 127 5.3E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 SUPERFAMILY SSF46894 156 223 8.5E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 167 220 2.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 SMART SM00421 164 221 3.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 197 5.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 197 209 5.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08780 fb296a3426952cf2a176eb63c2438ac6 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 181 5.5E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_13530 82882355e757101dd877ee525a295b25 118 Gene3D G3DSA:3.30.1460.30 8 111 3.5E-7 T 14-10-2018 PACID_13530 82882355e757101dd877ee525a295b25 118 SUPERFAMILY SSF159894 11 110 6.54E-13 T 14-10-2018 PACID_13530 82882355e757101dd877ee525a295b25 118 Pfam PF04993 TfoX N-terminal domain 18 108 1.0E-15 T 14-10-2018 IPR007076 TfoX, N-terminal PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Gene3D G3DSA:3.30.1360.40 259 356 1.7E-191 T 14-10-2018 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 10 838 22.292 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 SMART SM00434 30 488 1.5E-250 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 27 835 0.0 T 14-10-2018 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 634 678 3.9E-8 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 741 787 7.1E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 830 1.9E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 682 731 2.6E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 577 605 1.1E-5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 527 573 6.9E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Gene3D G3DSA:2.120.10.90 525 837 7.0E-110 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Gene3D G3DSA:3.90.199.10 51 510 1.7E-191 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 51 494 3.0E-143 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 Gene3D G3DSA:1.10.268.10 393 481 1.7E-191 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 SUPERFAMILY SSF56719 49 511 2.75E-163 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PACID_00110 e115c7a6c858885131da73d8a296cf27 893 SUPERFAMILY SSF101904 522 847 4.19E-95 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 Pfam PF01568 Molydopterin dinucleotide binding domain 1105 1214 2.9E-25 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 Gene3D G3DSA:3.40.50.12440 51 1251 0.0 T 14-10-2018 PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 SUPERFAMILY SSF53706 11 1079 0.0 T 14-10-2018 PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 37 1245 0.0 T 14-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 SUPERFAMILY SSF50692 1103 1245 5.88E-44 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 SMART SM00926 50 112 7.4E-8 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 55 73 - T 14-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 Pfam PF00384 Molybdopterin oxidoreductase 115 839 6.2E-130 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_02700 64087f5387faf561415d1a37e8ae6028 1251 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 785 802 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 PIRSF PIRSF036421 1 1093 1.5E-285 T 14-10-2018 IPR012393 Tricorn protease GO:0008236 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Gene3D G3DSA:2.120.10.60 1 289 3.9E-65 T 14-10-2018 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Gene3D G3DSA:3.30.750.44 698 768 1.0E-22 T 14-10-2018 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Gene3D G3DSA:3.90.226.10 881 1096 1.5E-64 T 14-10-2018 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 SUPERFAMILY SSF52096 698 1086 5.63E-67 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Gene3D G3DSA:2.130.10.10 312 685 1.4E-90 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Gene3D G3DSA:2.30.42.10 774 875 6.9E-7 T 14-10-2018 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 SMART SM00245 867 1060 3.2E-9 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Pfam PF07676 WD40-like Beta Propeller Repeat 477 509 0.005 T 14-10-2018 IPR011659 WD40-like Beta Propeller PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Pfam PF07676 WD40-like Beta Propeller Repeat 434 452 0.02 T 14-10-2018 IPR011659 WD40-like Beta Propeller PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Pfam PF07676 WD40-like Beta Propeller Repeat 45 62 0.01 T 14-10-2018 IPR011659 WD40-like Beta Propeller PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 SUPERFAMILY SSF50156 779 857 1.98E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 SUPERFAMILY SSF69304 4 277 8.76E-26 T 14-10-2018 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Pfam PF14685 Tricorn protease PDZ domain 779 859 2.1E-20 T 14-10-2018 IPR029414 Tricorn protease, PDZ domain PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Pfam PF03572 Peptidase family S41 903 1059 7.9E-20 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 SUPERFAMILY SSF69322 357 666 1.57E-20 T 14-10-2018 PACID_22740 c67d3480f05f2a385f15b69063b6c045 1107 Pfam PF14684 Tricorn protease C1 domain 699 767 1.4E-24 T 14-10-2018 IPR028204 Tricorn protease C1 domain PACID_11780 096b250290a377afa84d8c6708c1cae0 406 Pfam PF03448 MgtE intracellular N domain 160 260 1.6E-24 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain PACID_11780 096b250290a377afa84d8c6708c1cae0 406 Gene3D G3DSA:1.25.60.10 140 258 1.6E-24 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily PACID_11780 096b250290a377afa84d8c6708c1cae0 406 Gene3D G3DSA:3.10.580.10 259 388 7.5E-26 T 14-10-2018 PACID_11780 096b250290a377afa84d8c6708c1cae0 406 SMART SM00924 160 263 2.3E-30 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain PACID_11780 096b250290a377afa84d8c6708c1cae0 406 Pfam PF00571 CBS domain 337 387 6.4E-4 T 14-10-2018 IPR000644 CBS domain PACID_11780 096b250290a377afa84d8c6708c1cae0 406 Pfam PF00571 CBS domain 264 325 7.6E-5 T 14-10-2018 IPR000644 CBS domain PACID_11780 096b250290a377afa84d8c6708c1cae0 406 SUPERFAMILY SSF54631 262 390 8.73E-24 T 14-10-2018 PACID_11780 096b250290a377afa84d8c6708c1cae0 406 SUPERFAMILY SSF158791 144 260 2.35E-28 T 14-10-2018 PACID_11780 096b250290a377afa84d8c6708c1cae0 406 SUPERFAMILY SSF50346 1 52 9.03E-6 T 14-10-2018 IPR011033 PRC-barrel-like superfamily PACID_28210 8179b0c46cb19bde568bf675c9eedef4 438 Pfam PF00202 Aminotransferase class-III 33 426 3.6E-75 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_28210 8179b0c46cb19bde568bf675c9eedef4 438 SUPERFAMILY SSF53383 3 430 2.74E-108 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_28210 8179b0c46cb19bde568bf675c9eedef4 438 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 4 425 1.9E-163 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 PACID_28210 8179b0c46cb19bde568bf675c9eedef4 438 Gene3D G3DSA:3.40.640.10 69 321 8.1E-150 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_28210 8179b0c46cb19bde568bf675c9eedef4 438 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 433 92.291 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 PACID_28210 8179b0c46cb19bde568bf675c9eedef4 438 Gene3D G3DSA:3.90.1150.10 6 420 8.1E-150 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 SMART SM00937 84 194 1.0E-43 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 SUPERFAMILY SSF75620 31 365 7.59E-121 T 14-10-2018 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 2 363 37.094 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 Pfam PF00472 RF-1 domain 229 335 1.7E-36 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 244 260 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 Gene3D G3DSA:1.20.58.410 2 115 2.4E-29 T 14-10-2018 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 4 362 1.6E-155 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 Pfam PF03462 PCRF domain 31 219 1.5E-58 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 Gene3D G3DSA:3.30.160.20 225 318 5.6E-88 T 14-10-2018 PACID_20390 8f1958d699d0cc16f33c047adc93cd11 368 Gene3D G3DSA:3.30.70.1660 129 356 5.6E-88 T 14-10-2018 PACID_08760 452ad600840b5c102b6baa2c3e66e96d 251 SUPERFAMILY SSF52540 16 234 8.53E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_08760 452ad600840b5c102b6baa2c3e66e96d 251 Pfam PF00005 ABC transporter 33 172 4.4E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_08760 452ad600840b5c102b6baa2c3e66e96d 251 SMART SM00382 41 246 2.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_08760 452ad600840b5c102b6baa2c3e66e96d 251 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_08760 452ad600840b5c102b6baa2c3e66e96d 251 Gene3D G3DSA:3.40.50.300 14 250 9.9E-62 T 14-10-2018 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SUPERFAMILY SSF50249 648 725 2.46E-13 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 18 724 3.4E-253 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Gene3D G3DSA:3.30.230.70 260 579 2.0E-102 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Pfam PF00013 KH domain 585 642 3.7E-11 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 10 728 26.081 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SUPERFAMILY SSF54211 319 517 1.37E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SMART SM00322 581 646 5.4E-13 T 14-10-2018 IPR004087 K Homology domain GO:0003676 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Gene3D G3DSA:3.30.230.70 5 251 1.2E-84 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 PIRSF PIRSF005499 8 731 4.1E-277 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SUPERFAMILY SSF46915 265 345 2.51E-17 T 14-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SUPERFAMILY SSF54211 10 152 3.64E-45 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SMART SM00316 651 725 1.0E-15 T 14-10-2018 IPR022967 RNA-binding domain, S1 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 TIGRFAM TIGR02696 pppGpp_PNP: guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 6 723 0.0 T 14-10-2018 IPR014069 Guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase GO:0004654|GO:0005737|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Pfam PF00575 S1 RNA binding domain 650 721 5.9E-11 T 14-10-2018 IPR003029 S1 domain GO:0003676 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Pfam PF01138 3' exoribonuclease family, domain 1 349 481 1.1E-14 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Pfam PF01138 3' exoribonuclease family, domain 1 24 152 1.9E-16 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SUPERFAMILY SSF55666 153 261 7.32E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Gene3D G3DSA:2.40.50.140 580 707 3.2E-48 T 14-10-2018 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 268 344 6.1E-13 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SUPERFAMILY SSF54791 583 670 1.05E-18 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 PACID_21680 ba421f3c15e752590923aaa6f6ff25e0 731 SUPERFAMILY SSF55666 475 575 6.6E-23 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_21200 97b690af394ee24e5081e8714bd7aea7 321 Gene3D G3DSA:1.10.3720.10 76 317 4.0E-65 T 14-10-2018 IPR035906 MetI-like superfamily PACID_21200 97b690af394ee24e5081e8714bd7aea7 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 305 8.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_21200 97b690af394ee24e5081e8714bd7aea7 321 SUPERFAMILY SSF161098 80 305 2.09E-56 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07170 15f132f505308c2f55018c88cce3d501 210 Gene3D G3DSA:3.90.79.10 77 202 1.7E-19 T 14-10-2018 PACID_07170 15f132f505308c2f55018c88cce3d501 210 ProSitePatterns PS00893 Nudix box signature. 106 127 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PACID_07170 15f132f505308c2f55018c88cce3d501 210 SUPERFAMILY SSF55811 80 191 9.61E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_07170 15f132f505308c2f55018c88cce3d501 210 Pfam PF00293 NUDIX domain 81 193 2.5E-16 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_03410 90ded95e21d84edd6932cd392870ba63 344 Pfam PF13592 Winged helix-turn helix 95 153 5.1E-23 T 14-10-2018 IPR025959 Winged helix-turn helix domain PACID_03410 90ded95e21d84edd6932cd392870ba63 344 Pfam PF13551 Winged helix-turn helix 20 76 7.0E-7 T 14-10-2018 PACID_03410 90ded95e21d84edd6932cd392870ba63 344 SUPERFAMILY SSF46689 16 129 5.2E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_03410 90ded95e21d84edd6932cd392870ba63 344 Pfam PF13358 DDE superfamily endonuclease 169 305 8.4E-30 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain PACID_03410 90ded95e21d84edd6932cd392870ba63 344 Gene3D G3DSA:3.30.420.470 148 327 1.7E-15 T 14-10-2018 PACID_08340 13f92b5747c02d4c9ca430fc4651ec55 488 Gene3D G3DSA:3.90.1150.10 336 487 1.1E-42 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_08340 13f92b5747c02d4c9ca430fc4651ec55 488 Pfam PF00464 Serine hydroxymethyltransferase 164 437 1.1E-93 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PACID_08340 13f92b5747c02d4c9ca430fc4651ec55 488 Pfam PF00464 Serine hydroxymethyltransferase 30 132 1.6E-27 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PACID_08340 13f92b5747c02d4c9ca430fc4651ec55 488 PIRSF PIRSF000412 9 487 1.7E-156 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PACID_08340 13f92b5747c02d4c9ca430fc4651ec55 488 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 26 484 44.129 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PACID_08340 13f92b5747c02d4c9ca430fc4651ec55 488 SUPERFAMILY SSF53383 17 485 7.88E-144 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_08340 13f92b5747c02d4c9ca430fc4651ec55 488 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 275 291 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 Gene3D G3DSA:1.20.120.330 831 985 3.9E-33 T 14-10-2018 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 Gene3D G3DSA:1.20.120.330 341 489 3.0E-42 T 14-10-2018 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 592 818 7.6E-41 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 83 326 1.9E-42 T 14-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 SUPERFAMILY SSF81301 72 335 2.32E-56 T 14-10-2018 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 SUPERFAMILY SSF81593 833 983 1.33E-33 T 14-10-2018 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 Gene3D G3DSA:3.30.460.100 91 333 6.4E-58 T 14-10-2018 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 Gene3D G3DSA:3.30.460.100 601 823 5.7E-48 T 14-10-2018 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 SUPERFAMILY SSF81593 342 487 1.1E-37 T 14-10-2018 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 Pfam PF08335 GlnD PII-uridylyltransferase 348 486 1.3E-31 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 Pfam PF08335 GlnD PII-uridylyltransferase 841 983 7.4E-20 T 14-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 PACID_11950 4270bc195bb76a3a3ca722799689e100 986 SUPERFAMILY SSF81301 565 827 6.87E-59 T 14-10-2018 PACID_23730 64e60652f4a236c15cc1b053a832bdb3 242 Gene3D G3DSA:3.40.50.880 11 214 8.8E-7 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_23730 64e60652f4a236c15cc1b053a832bdb3 242 SUPERFAMILY SSF52317 19 214 2.08E-20 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_23730 64e60652f4a236c15cc1b053a832bdb3 242 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 7 202 8.1E-30 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 1.2E-25 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 Gene3D G3DSA:3.10.430.100 60 147 1.7E-24 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 8.0E-18 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 SUPERFAMILY SSF55653 57 146 1.96E-23 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 23.37 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 SUPERFAMILY SSF55658 1 57 1.52E-15 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 4.9E-35 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32320 f90e08876ca4e2b386892f5a3fe86cde 148 Gene3D G3DSA:3.40.5.10 1 52 1.1E-16 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_30290 f6a001d2fb0640e8ee1461b357c1a17d 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 127 2.9E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_30290 f6a001d2fb0640e8ee1461b357c1a17d 347 Gene3D G3DSA:3.40.50.720 154 293 2.1E-85 T 14-10-2018 PACID_30290 f6a001d2fb0640e8ee1461b357c1a17d 347 Gene3D G3DSA:3.90.180.10 14 328 2.1E-85 T 14-10-2018 PACID_30290 f6a001d2fb0640e8ee1461b357c1a17d 347 SUPERFAMILY SSF51735 145 315 3.7E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30290 f6a001d2fb0640e8ee1461b357c1a17d 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_30290 f6a001d2fb0640e8ee1461b357c1a17d 347 Pfam PF00107 Zinc-binding dehydrogenase 180 309 4.8E-15 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_30290 f6a001d2fb0640e8ee1461b357c1a17d 347 SUPERFAMILY SSF50129 1 175 3.77E-47 T 14-10-2018 IPR011032 GroES-like superfamily PACID_05300 e6a169430267eef0ebc711cf3a45c2b0 142 SUPERFAMILY SSF46785 4 116 7.61E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_05300 e6a169430267eef0ebc711cf3a45c2b0 142 Gene3D G3DSA:1.10.10.10 1 69 1.1E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_05300 e6a169430267eef0ebc711cf3a45c2b0 142 Pfam PF03965 Penicillinase repressor 4 115 1.3E-25 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 PACID_05300 e6a169430267eef0ebc711cf3a45c2b0 142 PIRSF PIRSF019455 1 122 7.3E-24 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PIRSF PIRSF000238 1 518 2.1E-237 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 Gene3D G3DSA:3.50.50.60 324 447 6.3E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 439 455 5.5E-41 T 14-10-2018 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 214 233 5.5E-41 T 14-10-2018 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 312 330 5.5E-41 T 14-10-2018 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 354 372 5.5E-41 T 14-10-2018 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 465 487 5.5E-41 T 14-10-2018 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 SUPERFAMILY SSF52833 1 99 1.68E-23 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 213 235 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 335 347 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 441 462 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 350 374 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 402 418 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 245 260 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 313 321 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 265 275 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 475 493 3.9E-59 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 SUPERFAMILY SSF51905 205 511 9.43E-51 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 212 490 8.4E-43 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 Gene3D G3DSA:3.40.30.80 1 199 2.3E-52 T 14-10-2018 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 Gene3D G3DSA:3.50.50.60 212 505 6.3E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 SUPERFAMILY SSF52833 104 196 9.51E-20 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 514 2.9E-229 T 14-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 PACID_27300 478e050a4a50f1fdd92a32079cf843e5 530 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 342 362 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PACID_11480 8249748633462e69036d1cf5938dc98b 577 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 278 2.6E-9 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_11480 8249748633462e69036d1cf5938dc98b 577 PIRSF PIRSF000538 3 532 1.1E-57 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_11480 8249748633462e69036d1cf5938dc98b 577 Gene3D G3DSA:3.30.420.40 283 547 2.9E-71 T 14-10-2018 PACID_11480 8249748633462e69036d1cf5938dc98b 577 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 4 538 7.2E-206 T 14-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 PACID_11480 8249748633462e69036d1cf5938dc98b 577 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 487 1.9E-36 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_11480 8249748633462e69036d1cf5938dc98b 577 SUPERFAMILY SSF53067 4 281 3.45E-34 T 14-10-2018 PACID_11480 8249748633462e69036d1cf5938dc98b 577 Gene3D G3DSA:3.30.420.40 1 280 3.4E-59 T 14-10-2018 PACID_11480 8249748633462e69036d1cf5938dc98b 577 SUPERFAMILY SSF53067 283 533 6.05E-51 T 14-10-2018 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 SUPERFAMILY SSF55347 151 316 1.83E-53 T 14-10-2018 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 197 219 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 25 143 9.8E-22 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 PIRSF PIRSF000098 16 447 2.4E-155 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 SUPERFAMILY SSF51735 17 172 2.6E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 SUPERFAMILY SSF55021 360 435 3.93E-8 T 14-10-2018 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 Gene3D G3DSA:3.30.360.10 150 356 7.3E-144 T 14-10-2018 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 Pfam PF00742 Homoserine dehydrogenase 151 329 1.4E-67 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 Gene3D G3DSA:3.30.70.260 357 435 7.3E-144 T 14-10-2018 PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 Pfam PF01842 ACT domain 363 429 9.7E-8 T 14-10-2018 IPR002912 ACT domain PACID_19700 ca7cefa44940e055b4ffc949be195e83 447 Gene3D G3DSA:3.40.50.720 19 348 7.3E-144 T 14-10-2018 PACID_13140 f1da6092000fc4ec0f5eea360a3eeb92 252 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 225 1.8E-25 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_13140 f1da6092000fc4ec0f5eea360a3eeb92 252 SMART SM00855 2 178 3.6E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_13140 f1da6092000fc4ec0f5eea360a3eeb92 252 Gene3D G3DSA:3.40.50.1240 2 233 8.1E-36 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_13140 f1da6092000fc4ec0f5eea360a3eeb92 252 SUPERFAMILY SSF53254 3 234 3.01E-35 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_24790 b62db93017d5413c478aebce76d51d69 419 SMART SM00155 332 359 17.0 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PACID_24790 b62db93017d5413c478aebce76d51d69 419 SMART SM00155 158 185 0.0026 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 PACID_24790 b62db93017d5413c478aebce76d51d69 419 Gene3D G3DSA:3.30.870.10 243 389 2.4E-25 T 14-10-2018 PACID_24790 b62db93017d5413c478aebce76d51d69 419 Pfam PF13091 PLD-like domain 79 212 5.2E-9 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PACID_24790 b62db93017d5413c478aebce76d51d69 419 Pfam PF13091 PLD-like domain 260 383 6.3E-25 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 PACID_24790 b62db93017d5413c478aebce76d51d69 419 Gene3D G3DSA:3.30.870.10 56 230 2.6E-36 T 14-10-2018 PACID_24790 b62db93017d5413c478aebce76d51d69 419 SUPERFAMILY SSF56024 230 402 3.59E-37 T 14-10-2018 PACID_24790 b62db93017d5413c478aebce76d51d69 419 SUPERFAMILY SSF56024 50 216 3.45E-36 T 14-10-2018 PACID_33340 5eca6d80d165b2c150a9dbe47e79d170 169 Pfam PF13274 Protein of unknown function (DUF4065) 46 123 1.6E-7 T 14-10-2018 IPR025272 Domain of unknown function DUF4065 PACID_11460 0b8ec1ceebadb62b38b709b3a8394df6 520 PIRSF PIRSF000538 5 513 7.1E-112 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_11460 0b8ec1ceebadb62b38b709b3a8394df6 520 Gene3D G3DSA:3.30.420.40 257 516 1.4E-71 T 14-10-2018 PACID_11460 0b8ec1ceebadb62b38b709b3a8394df6 520 SUPERFAMILY SSF53067 257 508 8.81E-58 T 14-10-2018 PACID_11460 0b8ec1ceebadb62b38b709b3a8394df6 520 SUPERFAMILY SSF53067 7 258 1.94E-63 T 14-10-2018 PACID_11460 0b8ec1ceebadb62b38b709b3a8394df6 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 268 460 1.7E-34 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_11460 0b8ec1ceebadb62b38b709b3a8394df6 520 Gene3D G3DSA:3.30.420.40 3 253 4.3E-69 T 14-10-2018 PACID_11460 0b8ec1ceebadb62b38b709b3a8394df6 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 255 2.3E-46 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_17560 cc13aeb604f073352662d81076685f39 221 SUPERFAMILY SSF51366 3 213 6.6E-63 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PACID_17560 cc13aeb604f073352662d81076685f39 221 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 212 4.2E-78 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PACID_17560 cc13aeb604f073352662d81076685f39 221 Gene3D G3DSA:3.20.20.70 1 216 7.6E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_17560 cc13aeb604f073352662d81076685f39 221 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PACID_17560 cc13aeb604f073352662d81076685f39 221 PIRSF PIRSF001461 1 221 3.7E-88 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PACID_17560 cc13aeb604f073352662d81076685f39 221 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 199 7.8E-73 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PACID_17560 cc13aeb604f073352662d81076685f39 221 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 PACID_12680 0ea984935a8d019f3b7f76fe49f55e28 309 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_12680 0ea984935a8d019f3b7f76fe49f55e28 309 Gene3D G3DSA:3.40.50.300 1 239 2.4E-68 T 14-10-2018 PACID_12680 0ea984935a8d019f3b7f76fe49f55e28 309 SMART SM00382 31 213 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_12680 0ea984935a8d019f3b7f76fe49f55e28 309 Pfam PF00005 ABC transporter 23 165 3.2E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_12680 0ea984935a8d019f3b7f76fe49f55e28 309 SUPERFAMILY SSF52540 5 228 6.94E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13610 495afc51af32370c06bcf284f55f7d71 227 SUPERFAMILY SSF46689 174 223 1.08E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_13610 495afc51af32370c06bcf284f55f7d71 227 Gene3D G3DSA:1.10.10.60 120 172 4.4E-13 T 14-10-2018 PACID_13610 495afc51af32370c06bcf284f55f7d71 227 Gene3D G3DSA:1.10.10.60 173 224 1.6E-10 T 14-10-2018 PACID_13610 495afc51af32370c06bcf284f55f7d71 227 SUPERFAMILY SSF55785 2 112 4.89E-5 T 14-10-2018 IPR035965 PAS domain superfamily PACID_13610 495afc51af32370c06bcf284f55f7d71 227 Gene3D G3DSA:3.30.450.20 1 113 4.7E-8 T 14-10-2018 PACID_13610 495afc51af32370c06bcf284f55f7d71 227 SMART SM00342 138 221 8.6E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PACID_13610 495afc51af32370c06bcf284f55f7d71 227 Pfam PF12833 Helix-turn-helix domain 144 222 7.6E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PACID_13610 495afc51af32370c06bcf284f55f7d71 227 SUPERFAMILY SSF46689 124 171 9.41E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_16350 499235e4a8a242e794c8d32885a5d034 418 Pfam PF01612 3'-5' exonuclease 22 188 1.7E-29 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PACID_16350 499235e4a8a242e794c8d32885a5d034 418 Gene3D G3DSA:1.10.150.80 219 322 1.8E-14 T 14-10-2018 PACID_16350 499235e4a8a242e794c8d32885a5d034 418 Gene3D G3DSA:3.30.420.10 2 211 8.5E-67 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_16350 499235e4a8a242e794c8d32885a5d034 418 Pfam PF00570 HRDC domain 238 306 2.3E-6 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PACID_16350 499235e4a8a242e794c8d32885a5d034 418 SUPERFAMILY SSF47819 216 326 4.86E-13 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 PACID_16350 499235e4a8a242e794c8d32885a5d034 418 SUPERFAMILY SSF53098 4 214 4.4E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_16350 499235e4a8a242e794c8d32885a5d034 418 SMART SM00474 17 189 1.7E-31 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 PACID_16350 499235e4a8a242e794c8d32885a5d034 418 Gene3D G3DSA:1.10.150.80 327 417 1.3E-25 T 14-10-2018 PACID_15230 53e352e88397f8a31e0a90c92705784d 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 49 67 4.0E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_15230 53e352e88397f8a31e0a90c92705784d 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 35 49 4.0E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_15230 53e352e88397f8a31e0a90c92705784d 269 Pfam PF08220 DeoR-like helix-turn-helix domain 17 69 7.1E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_15230 53e352e88397f8a31e0a90c92705784d 269 SUPERFAMILY SSF46785 15 73 1.77E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_15230 53e352e88397f8a31e0a90c92705784d 269 SMART SM00420 17 69 5.2E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_15230 53e352e88397f8a31e0a90c92705784d 269 SMART SM01134 83 245 2.0E-56 T 14-10-2018 PACID_15230 53e352e88397f8a31e0a90c92705784d 269 Pfam PF00455 DeoR C terminal sensor domain 85 243 6.4E-44 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PACID_15230 53e352e88397f8a31e0a90c92705784d 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 17 51 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PACID_15230 53e352e88397f8a31e0a90c92705784d 269 SUPERFAMILY SSF100950 85 244 1.05E-26 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_15230 53e352e88397f8a31e0a90c92705784d 269 Gene3D G3DSA:1.10.10.10 5 68 1.5E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_00320 bf5dfd6d8ef95f4a092181cb920cc7a4 432 Pfam PF03600 Citrate transporter 16 370 1.9E-48 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 PACID_00320 bf5dfd6d8ef95f4a092181cb920cc7a4 432 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 5.2E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_00320 bf5dfd6d8ef95f4a092181cb920cc7a4 432 PRINTS PR00758 Arsenical pump membrane protein signature 105 129 5.2E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_00320 bf5dfd6d8ef95f4a092181cb920cc7a4 432 PRINTS PR00758 Arsenical pump membrane protein signature 221 246 5.2E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_00320 bf5dfd6d8ef95f4a092181cb920cc7a4 432 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 5.2E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_00320 bf5dfd6d8ef95f4a092181cb920cc7a4 432 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 5.2E-9 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 SUPERFAMILY SSF46785 60 128 2.38E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 SMART SM00895 149 274 1.9E-20 T 14-10-2018 IPR011711 GntR, C-terminal PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 Pfam PF07729 FCD domain 149 273 1.3E-20 T 14-10-2018 IPR011711 GntR, C-terminal PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 SUPERFAMILY SSF48008 147 280 3.4E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 96 112 3.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 82 96 3.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 Gene3D G3DSA:1.20.120.530 132 280 2.5E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 Pfam PF00392 Bacterial regulatory proteins, gntR family 66 119 5.9E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 Gene3D G3DSA:1.10.10.10 62 131 2.8E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_05200 87f43fdd3498b192de2d4f5b9a5e3d69 284 SMART SM00345 63 124 4.0E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_14100 7d54a0fdc99358445c249462082a83a0 390 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 1 387 36.962 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PACID_14100 7d54a0fdc99358445c249462082a83a0 390 Gene3D G3DSA:2.60.260.20 256 376 2.3E-28 T 14-10-2018 PACID_14100 7d54a0fdc99358445c249462082a83a0 390 SMART SM00271 3 59 4.6E-28 T 14-10-2018 IPR001623 DnaJ domain PACID_14100 7d54a0fdc99358445c249462082a83a0 390 Pfam PF00226 DnaJ domain 4 64 9.0E-25 T 14-10-2018 IPR001623 DnaJ domain PACID_14100 7d54a0fdc99358445c249462082a83a0 390 ProSitePatterns PS00636 Nt-dnaJ domain signature. 44 63 - T 14-10-2018 IPR018253 DnaJ domain, conserved site PACID_14100 7d54a0fdc99358445c249462082a83a0 390 Gene3D G3DSA:1.10.287.110 1 108 1.5E-30 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PACID_14100 7d54a0fdc99358445c249462082a83a0 390 SUPERFAMILY SSF49493 260 356 1.2E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PACID_14100 7d54a0fdc99358445c249462082a83a0 390 SUPERFAMILY SSF57938 132 212 2.88E-19 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily PACID_14100 7d54a0fdc99358445c249462082a83a0 390 SUPERFAMILY SSF49493 112 264 3.4E-18 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PACID_14100 7d54a0fdc99358445c249462082a83a0 390 PRINTS PR00625 DnaJ domain signature 6 24 9.7E-19 T 14-10-2018 IPR001623 DnaJ domain PACID_14100 7d54a0fdc99358445c249462082a83a0 390 PRINTS PR00625 DnaJ domain signature 59 78 9.7E-19 T 14-10-2018 IPR001623 DnaJ domain PACID_14100 7d54a0fdc99358445c249462082a83a0 390 PRINTS PR00625 DnaJ domain signature 39 59 9.7E-19 T 14-10-2018 IPR001623 DnaJ domain PACID_14100 7d54a0fdc99358445c249462082a83a0 390 SUPERFAMILY SSF46565 4 100 2.49E-32 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PACID_14100 7d54a0fdc99358445c249462082a83a0 390 Pfam PF00684 DnaJ central domain 145 209 2.7E-14 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PACID_14100 7d54a0fdc99358445c249462082a83a0 390 Pfam PF01556 DnaJ C terminal domain 120 345 6.8E-33 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal PACID_14100 7d54a0fdc99358445c249462082a83a0 390 Gene3D G3DSA:2.60.260.20 115 251 1.1E-34 T 14-10-2018 PACID_14100 7d54a0fdc99358445c249462082a83a0 390 Gene3D G3DSA:2.10.230.10 145 209 1.1E-34 T 14-10-2018 PACID_12090 b3e9c8ef22decd6639c3add2538ab9c9 329 TIGRFAM TIGR00510 lipA: lipoyl synthase 19 304 3.2E-94 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PACID_12090 b3e9c8ef22decd6639c3add2538ab9c9 329 SMART SM00729 71 277 1.8E-17 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PACID_12090 b3e9c8ef22decd6639c3add2538ab9c9 329 Pfam PF04055 Radical SAM superfamily 80 234 5.4E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_12090 b3e9c8ef22decd6639c3add2538ab9c9 329 Gene3D G3DSA:3.20.20.70 74 258 1.1E-19 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_12090 b3e9c8ef22decd6639c3add2538ab9c9 329 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 60 2.1E-6 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PACID_12090 b3e9c8ef22decd6639c3add2538ab9c9 329 SUPERFAMILY SSF102114 36 310 5.49E-61 T 14-10-2018 PACID_12090 b3e9c8ef22decd6639c3add2538ab9c9 329 Hamap MF_00206 Lipoyl synthase [lipA]. 1 307 130.01 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PACID_12090 b3e9c8ef22decd6639c3add2538ab9c9 329 PIRSF PIRSF005963 2 316 2.7E-116 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 SUPERFAMILY SSF46977 444 534 4.32E-18 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 Gene3D G3DSA:3.50.50.60 18 413 4.0E-133 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 Pfam PF00890 FAD binding domain 18 402 1.0E-77 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 Pfam PF02910 Fumarate reductase flavoprotein C-term 445 520 9.0E-6 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 SUPERFAMILY SSF51905 4 424 4.23E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 16 514 4.8E-143 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 SUPERFAMILY SSF56425 243 362 2.39E-34 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 Gene3D G3DSA:1.20.58.100 437 529 4.1E-13 T 14-10-2018 PACID_18360 221e72cfae8a8df90393a83bf7107f42 551 Gene3D G3DSA:3.90.700.10 252 368 4.0E-133 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_23660 dab9b83466f4ec267ddc43f5c84654ce 644 Gene3D G3DSA:1.20.1740.10 22 495 9.3E-108 T 14-10-2018 PACID_23660 dab9b83466f4ec267ddc43f5c84654ce 644 Pfam PF13520 Amino acid permease 32 458 4.6E-50 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_23660 dab9b83466f4ec267ddc43f5c84654ce 644 PIRSF PIRSF006060 14 496 1.1E-78 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_23660 dab9b83466f4ec267ddc43f5c84654ce 644 PIRSF PIRSF006060 516 594 2.6 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 Gene3D G3DSA:2.70.150.20 255 367 1.5E-43 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 Pfam PF00122 E1-E2 ATPase 262 443 3.7E-57 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00943 Copper-transporting ATPase signature 735 749 4.7E-19 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00943 Copper-transporting ATPase signature 174 193 4.7E-19 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00943 Copper-transporting ATPase signature 231 250 4.7E-19 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00943 Copper-transporting ATPase signature 447 462 4.7E-19 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00943 Copper-transporting ATPase signature 251 269 4.7E-19 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00943 Copper-transporting ATPase signature 385 399 4.7E-19 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00943 Copper-transporting ATPase signature 639 656 4.7E-19 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 Gene3D G3DSA:3.40.1110.10 475 594 1.3E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 466 472 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 SUPERFAMILY SSF81653 268 362 1.83E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 189 771 4.3E-189 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 587 598 4.7E-26 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 312 326 4.7E-26 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 464 478 4.7E-26 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 609 619 4.7E-26 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 685 697 4.7E-26 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 662 681 4.7E-26 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 SUPERFAMILY SSF81665 227 760 4.32E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 Pfam PF00702 haloacid dehalogenase-like hydrolase 460 675 2.7E-44 T 14-10-2018 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 SUPERFAMILY SSF56784 462 768 6.42E-56 T 14-10-2018 IPR036412 HAD-like superfamily PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 Gene3D G3DSA:3.40.50.1000 445 714 1.3E-84 T 14-10-2018 IPR023214 HAD superfamily PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 233 753 2.5E-88 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_31450 be339b0fd8e8580b04c5a6671596bc21 776 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 171 772 2.8E-178 T 14-10-2018 PACID_13240 cf6ef49a2fe3db45618b02b4e43fb055 492 Gene3D G3DSA:3.40.1190.10 8 305 1.1E-97 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_13240 cf6ef49a2fe3db45618b02b4e43fb055 492 SUPERFAMILY SSF53244 307 443 3.48E-20 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_13240 cf6ef49a2fe3db45618b02b4e43fb055 492 Pfam PF02875 Mur ligase family, glutamate ligase domain 307 374 7.4E-8 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PACID_13240 cf6ef49a2fe3db45618b02b4e43fb055 492 Pfam PF08245 Mur ligase middle domain 53 282 4.1E-11 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PACID_13240 cf6ef49a2fe3db45618b02b4e43fb055 492 Gene3D G3DSA:3.90.190.20 308 445 1.3E-28 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_13240 cf6ef49a2fe3db45618b02b4e43fb055 492 SUPERFAMILY SSF53623 12 304 6.21E-92 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_13240 cf6ef49a2fe3db45618b02b4e43fb055 492 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 51 74 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 PACID_13240 cf6ef49a2fe3db45618b02b4e43fb055 492 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 442 2.6E-107 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 PACID_18020 f806eab75db6c93309e318a26e279566 342 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 330 4.0E-36 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PACID_18020 f806eab75db6c93309e318a26e279566 342 SMART SM00382 52 183 4.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_18020 f806eab75db6c93309e318a26e279566 342 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.2E-29 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 PACID_18020 f806eab75db6c93309e318a26e279566 342 SUPERFAMILY SSF52540 21 254 1.05E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_18020 f806eab75db6c93309e318a26e279566 342 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 329 2.4E-127 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PACID_18020 f806eab75db6c93309e318a26e279566 342 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 342 151.979 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 PACID_18020 f806eab75db6c93309e318a26e279566 342 SUPERFAMILY SSF46785 259 333 7.98E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_18020 f806eab75db6c93309e318a26e279566 342 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 10 236 1.2E-102 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PACID_18020 f806eab75db6c93309e318a26e279566 342 Gene3D G3DSA:3.40.50.300 21 182 1.2E-33 T 14-10-2018 PACID_18020 f806eab75db6c93309e318a26e279566 342 Gene3D G3DSA:1.10.10.10 260 337 7.5E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18020 f806eab75db6c93309e318a26e279566 342 Gene3D G3DSA:1.10.8.60 184 258 1.8E-24 T 14-10-2018 PACID_29920 dbead046475a25fe845b416958dbd046 95 Gene3D G3DSA:3.30.70.240 1 75 1.4E-27 T 14-10-2018 PACID_29920 dbead046475a25fe845b416958dbd046 95 Pfam PF09707 CRISPR-associated protein (Cas_Cas2CT1978) 2 86 7.9E-32 T 14-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype PACID_29920 dbead046475a25fe845b416958dbd046 95 TIGRFAM TIGR01873 cas_CT1978: CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI 3 86 1.1E-18 T 14-10-2018 IPR010152 CRISPR-associated protein Cas2 subtype PACID_17670 8e8f3520663c01678ab42445ebab89b5 410 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 380 1.3E-61 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PACID_17670 8e8f3520663c01678ab42445ebab89b5 410 Gene3D G3DSA:3.40.50.10300 181 409 7.9E-71 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PACID_17670 8e8f3520663c01678ab42445ebab89b5 410 SUPERFAMILY SSF52507 3 170 9.81E-53 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PACID_17670 8e8f3520663c01678ab42445ebab89b5 410 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 403 2.3E-108 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 PACID_17670 8e8f3520663c01678ab42445ebab89b5 410 Gene3D G3DSA:3.40.50.1950 2 178 8.2E-46 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 PACID_17670 8e8f3520663c01678ab42445ebab89b5 410 SUPERFAMILY SSF102645 186 408 3.4E-59 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 PACID_17670 8e8f3520663c01678ab42445ebab89b5 410 Pfam PF02441 Flavoprotein 4 168 7.1E-37 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 PACID_22230 168806df91c159c6af58f89bdde91776 436 Pfam PF01145 SPFH domain / Band 7 family 24 194 9.0E-34 T 14-10-2018 IPR001107 Band 7 domain PACID_22230 168806df91c159c6af58f89bdde91776 436 Gene3D G3DSA:3.30.479.30 48 180 1.5E-42 T 14-10-2018 PACID_22230 168806df91c159c6af58f89bdde91776 436 ProSitePatterns PS01270 Band 7 protein family signature. 134 162 - T 14-10-2018 IPR018080 Band 7/stomatin-like, conserved site PACID_22230 168806df91c159c6af58f89bdde91776 436 SUPERFAMILY SSF117892 51 185 1.18E-38 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PACID_22230 168806df91c159c6af58f89bdde91776 436 SMART SM00244 20 178 1.5E-55 T 14-10-2018 IPR001107 Band 7 domain PACID_22230 168806df91c159c6af58f89bdde91776 436 PRINTS PR00721 Stomatin signature 75 96 1.4E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_22230 168806df91c159c6af58f89bdde91776 436 PRINTS PR00721 Stomatin signature 27 49 1.4E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_22230 168806df91c159c6af58f89bdde91776 436 PRINTS PR00721 Stomatin signature 154 172 1.4E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_22230 168806df91c159c6af58f89bdde91776 436 PRINTS PR00721 Stomatin signature 110 127 1.4E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_22230 168806df91c159c6af58f89bdde91776 436 PRINTS PR00721 Stomatin signature 130 153 1.4E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_22230 168806df91c159c6af58f89bdde91776 436 PRINTS PR00721 Stomatin signature 173 194 1.4E-32 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 Pfam PF00149 Calcineurin-like phosphoesterase 182 377 1.5E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 TIGRFAM TIGR04075 bacter_Pnkp: polynucleotide kinase-phosphatase 3 833 0.0 T 14-10-2018 IPR024028 Polynucleotide kinase-phosphatase, bacterial PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 SUPERFAMILY SSF52540 5 127 9.22E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 Gene3D G3DSA:3.40.50.300 2 171 3.4E-39 T 14-10-2018 PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 Gene3D G3DSA:3.30.470.30 645 833 2.3E-74 T 14-10-2018 PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 Gene3D G3DSA:3.30.470.30 437 643 3.4E-53 T 14-10-2018 PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 SUPERFAMILY SSF56300 181 407 5.13E-43 T 14-10-2018 PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 Gene3D G3DSA:3.60.21.10 172 426 3.3E-72 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 Pfam PF16536 PNKP adenylyltransferase domain, C-terminal region 775 833 3.4E-31 T 14-10-2018 IPR032390 Polynucleotide kinase-phosphatase, C-terminal PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 SUPERFAMILY SSF56091 512 745 3.17E-17 T 14-10-2018 PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 Pfam PF13671 AAA domain 11 137 7.7E-17 T 14-10-2018 PACID_17310 1dd171ae80d1d6893a5a90b1a6e5d55e 833 Pfam PF16542 PNKP adenylyltransferase domain, ligase domain 467 770 2.8E-124 T 14-10-2018 IPR032380 Polynucleotide kinase-phosphatase, ligase domain PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 Gene3D G3DSA:3.30.110.10 61 156 1.6E-34 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 60 1.2E-23 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 SUPERFAMILY SSF54364 1 63 3.27E-22 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 155 25.309 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 69 152 2.2E-35 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 ProSitePatterns PS00938 Initiation factor 3 signature. 43 56 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 Gene3D G3DSA:3.10.20.80 1 60 5.7E-24 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 SUPERFAMILY SSF55200 70 153 1.1E-32 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 PACID_10170 e1f84cc6456e0d6c7bd52635bcd4de7e 212 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 155 2.6E-56 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 PACID_31640 d8c08041e43b89a4f6353184d7b4b788 346 SUPERFAMILY SSF50129 1 170 2.59E-41 T 14-10-2018 IPR011032 GroES-like superfamily PACID_31640 d8c08041e43b89a4f6353184d7b4b788 346 SMART SM00829 4 341 0.0021 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_31640 d8c08041e43b89a4f6353184d7b4b788 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 55 69 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_31640 d8c08041e43b89a4f6353184d7b4b788 346 Gene3D G3DSA:3.90.180.10 12 331 1.6E-91 T 14-10-2018 PACID_31640 d8c08041e43b89a4f6353184d7b4b788 346 SUPERFAMILY SSF51735 137 310 2.8E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_31640 d8c08041e43b89a4f6353184d7b4b788 346 Gene3D G3DSA:3.40.50.720 151 289 1.6E-91 T 14-10-2018 PACID_31640 d8c08041e43b89a4f6353184d7b4b788 346 Pfam PF00107 Zinc-binding dehydrogenase 173 305 3.2E-24 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_31640 d8c08041e43b89a4f6353184d7b4b788 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 20 125 5.4E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_18320 fb727f9520caddfeb3eafe56329c1b29 136 Gene3D G3DSA:3.30.1490.190 83 136 3.3E-22 T 14-10-2018 PACID_18320 fb727f9520caddfeb3eafe56329c1b29 136 Pfam PF01475 Ferric uptake regulator family 12 127 2.9E-32 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PACID_18320 fb727f9520caddfeb3eafe56329c1b29 136 Gene3D G3DSA:1.10.10.10 3 82 1.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18320 fb727f9520caddfeb3eafe56329c1b29 136 SUPERFAMILY SSF46785 11 132 3.86E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_06730 a2b3ec428c0cba157075795774127059 564 SMART SM00382 325 533 9.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_06730 a2b3ec428c0cba157075795774127059 564 SMART SM00382 45 249 3.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_06730 a2b3ec428c0cba157075795774127059 564 Gene3D G3DSA:3.40.50.300 293 563 7.0E-85 T 14-10-2018 PACID_06730 a2b3ec428c0cba157075795774127059 564 Gene3D G3DSA:3.40.50.300 14 292 3.9E-83 T 14-10-2018 PACID_06730 a2b3ec428c0cba157075795774127059 564 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_06730 a2b3ec428c0cba157075795774127059 564 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_06730 a2b3ec428c0cba157075795774127059 564 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 282 8.8E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_06730 a2b3ec428c0cba157075795774127059 564 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 520 552 0.0038 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_06730 a2b3ec428c0cba157075795774127059 564 SUPERFAMILY SSF52540 16 271 9.06E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06730 a2b3ec428c0cba157075795774127059 564 SUPERFAMILY SSF52540 297 540 9.8E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06730 a2b3ec428c0cba157075795774127059 564 Pfam PF00005 ABC transporter 317 469 4.0E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_06730 a2b3ec428c0cba157075795774127059 564 Pfam PF00005 ABC transporter 37 199 1.8E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 20 105 3.1E-16 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 Gene3D G3DSA:3.20.20.80 147 586 4.2E-163 T 14-10-2018 PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 SMART SM00642 166 572 1.3E-8 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 Gene3D G3DSA:2.60.40.10 10 145 2.8E-37 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 SUPERFAMILY SSF51011 598 694 2.52E-13 T 14-10-2018 PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 SUPERFAMILY SSF51445 154 579 1.63E-121 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 Gene3D G3DSA:2.60.40.1180 597 695 1.7E-8 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 Pfam PF00128 Alpha amylase, catalytic domain 320 535 3.7E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 Pfam PF00128 Alpha amylase, catalytic domain 197 283 6.4E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 18 693 9.5E-253 T 14-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 PACID_19100 b3e8d57e63bc830d10dacb6c46e63ccd 735 SUPERFAMILY SSF81296 20 151 4.9E-34 T 14-10-2018 IPR014756 Immunoglobulin E-set PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 PIRSF PIRSF000102 1 316 9.8E-93 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 SUPERFAMILY SSF51735 3 146 2.49E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 4 314 37.443 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 SUPERFAMILY SSF56327 145 312 1.73E-47 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 PRINTS PR00086 L-lactate dehydrogenase signature 142 160 1.6E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 PRINTS PR00086 L-lactate dehydrogenase signature 172 185 1.6E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 1.6E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 1.6E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 PRINTS PR00086 L-lactate dehydrogenase signature 118 138 1.6E-32 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 144 1.1E-34 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 311 5.4E-20 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 Gene3D G3DSA:3.40.50.720 1 146 2.4E-46 T 14-10-2018 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 9 307 3.9E-98 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 Gene3D G3DSA:3.90.110.10 147 316 4.1E-52 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PACID_00350 d120bad4a8305a0cb5efab50e2272df4 323 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 174 180 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 PACID_26740 71c37863ccf465a226a7df9683853bb5 531 Pfam PF02720 Domain of unknown function (DUF222) 35 398 1.1E-19 T 14-10-2018 IPR003870 Domain of unknown function DUF222 PACID_26740 71c37863ccf465a226a7df9683853bb5 531 Pfam PF01844 HNH endonuclease 411 438 7.3E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PACID_26740 71c37863ccf465a226a7df9683853bb5 531 SMART SM00507 389 441 2.6E-9 T 14-10-2018 IPR003615 HNH nuclease PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SUPERFAMILY SSF52540 25 365 5.31E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SMART SM01058 513 614 4.4E-46 T 14-10-2018 IPR003711 CarD-like/TRCF domain PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SUPERFAMILY SSF143517 1027 1145 1.05E-32 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Pfam PF00270 DEAD/DEAH box helicase 663 804 4.7E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SMART SM00982 1041 1138 2.3E-36 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 44 1138 27.434 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Pfam PF02559 CarD-like/TRCF domain 514 613 3.7E-29 T 14-10-2018 IPR003711 CarD-like/TRCF domain PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SUPERFAMILY SSF52540 564 821 5.23E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SUPERFAMILY SSF52540 820 1026 3.55E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Gene3D G3DSA:3.40.50.300 513 1026 1.8E-228 T 14-10-2018 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Pfam PF00271 Helicase conserved C-terminal domain 846 947 2.4E-13 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Pfam PF03461 TRCF domain 1042 1124 4.0E-24 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SMART SM00487 638 828 1.1E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SMART SM00490 864 948 1.6E-14 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 167 1114 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SUPERFAMILY SSF141259 508 584 6.28E-18 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Gene3D G3DSA:3.30.2060.10 150 237 7.3E-62 T 14-10-2018 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Gene3D G3DSA:3.40.50.11180 59 313 7.3E-62 T 14-10-2018 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Gene3D G3DSA:2.30.30.840 517 579 1.8E-228 T 14-10-2018 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 SUPERFAMILY SSF52540 391 499 1.96E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Gene3D G3DSA:3.40.50.300 580 819 1.8E-228 T 14-10-2018 PACID_09970 da8f3ad5dfcad24beacfcab27264d6fc 1200 Gene3D G3DSA:3.90.1150.50 1037 1154 6.3E-26 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 Gene3D G3DSA:2.60.40.10 207 305 2.9E-7 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 SUPERFAMILY SSF51445 303 614 1.69E-54 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 Pfam PF00703 Glycosyl hydrolases family 2 208 305 2.4E-5 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 88 160 1.8E-9 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 307 466 5.8E-5 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 Gene3D G3DSA:3.20.20.80 307 618 1.8E-52 T 14-10-2018 PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 Gene3D G3DSA:2.60.120.260 27 201 1.2E-36 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 SUPERFAMILY SSF49785 23 201 1.06E-41 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_25660 576052e2d73c2a186f2befe05a5fb9e1 624 SUPERFAMILY SSF49303 214 305 8.06E-10 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PACID_19800 f996526c785702dac72390e68f531afb 490 Pfam PF12282 Signal transduction histidine kinase 6 147 1.1E-44 T 14-10-2018 IPR022066 Signal transduction histidine kinase, N-terminal PACID_19800 f996526c785702dac72390e68f531afb 490 Gene3D G3DSA:3.30.450.280 1 133 9.4E-40 T 14-10-2018 IPR038424 Signal transduction histidine kinase, N-terminal domain superfamily PACID_19800 f996526c785702dac72390e68f531afb 490 Gene3D G3DSA:3.30.565.10 354 488 2.8E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_19800 f996526c785702dac72390e68f531afb 490 Gene3D G3DSA:3.30.450.20 134 281 6.0E-30 T 14-10-2018 PACID_19800 f996526c785702dac72390e68f531afb 490 SUPERFAMILY SSF55874 353 485 1.34E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_19800 f996526c785702dac72390e68f531afb 490 Pfam PF07568 Histidine kinase 296 365 1.2E-21 T 14-10-2018 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain PACID_19800 f996526c785702dac72390e68f531afb 490 SMART SM00911 296 382 0.0029 T 14-10-2018 IPR011102 Signal transduction histidine kinase, HWE region GO:0004673 PACID_19800 f996526c785702dac72390e68f531afb 490 SMART SM00387 390 490 1.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_26330 e99ef27c35768a4a729c0adf1d5f83c7 183 Pfam PF12838 4Fe-4S dicluster domain 51 111 4.8E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_26330 e99ef27c35768a4a729c0adf1d5f83c7 183 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 141 25.264 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26330 e99ef27c35768a4a729c0adf1d5f83c7 183 Gene3D G3DSA:3.30.70.3270 23 162 7.6E-45 T 14-10-2018 PACID_26330 e99ef27c35768a4a729c0adf1d5f83c7 183 SUPERFAMILY SSF54862 32 142 1.97E-25 T 14-10-2018 PACID_26330 e99ef27c35768a4a729c0adf1d5f83c7 183 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 6 135 6.1E-39 T 14-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26330 e99ef27c35768a4a729c0adf1d5f83c7 183 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 97 108 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_25080 5ddd3e978a48b5b04c2d6681efb56538 462 PIRSF PIRSF017184 2 461 1.4E-80 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 PACID_25080 5ddd3e978a48b5b04c2d6681efb56538 462 Gene3D G3DSA:3.40.50.10260 2 203 4.0E-43 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 PACID_25080 5ddd3e978a48b5b04c2d6681efb56538 462 SUPERFAMILY SSF64153 4 231 6.93E-46 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 PACID_25080 5ddd3e978a48b5b04c2d6681efb56538 462 SUPERFAMILY SSF53613 209 458 1.78E-49 T 14-10-2018 IPR029056 Ribokinase-like PACID_25080 5ddd3e978a48b5b04c2d6681efb56538 462 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 210 462 15.678 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PACID_25080 5ddd3e978a48b5b04c2d6681efb56538 462 Pfam PF01256 Carbohydrate kinase 237 438 6.4E-36 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 PACID_25080 5ddd3e978a48b5b04c2d6681efb56538 462 Pfam PF03853 YjeF-related protein N-terminus 24 180 2.3E-35 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 PACID_25080 5ddd3e978a48b5b04c2d6681efb56538 462 Gene3D G3DSA:3.40.1190.20 204 460 9.3E-62 T 14-10-2018 IPR029056 Ribokinase-like PACID_02540 fef868ddf5964c5ae5588dc6518b898b 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 281 8.9E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_02540 fef868ddf5964c5ae5588dc6518b898b 283 SUPERFAMILY SSF161098 77 264 3.79E-28 T 14-10-2018 IPR035906 MetI-like superfamily PACID_02540 fef868ddf5964c5ae5588dc6518b898b 283 Gene3D G3DSA:1.10.3720.10 71 283 1.2E-23 T 14-10-2018 IPR035906 MetI-like superfamily PACID_29800 0f1f43730c1da9b3370ab924106fcea3 167 Pfam PF13493 Domain of unknown function (DUF4118) 3 107 2.8E-15 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain PACID_29800 0f1f43730c1da9b3370ab924106fcea3 167 Gene3D G3DSA:1.20.120.620 1 102 3.2E-9 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily PACID_30230 cb1d088a7f1c056b15f2d8c4cb5bf39b 845 SUPERFAMILY SSF48208 449 762 7.99E-16 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_30230 cb1d088a7f1c056b15f2d8c4cb5bf39b 845 Pfam PF12215 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term 1 358 1.9E-44 T 14-10-2018 IPR024462 Glycosyl-hydrolase family 116, N-terminal KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45|Reactome: R-HSA-1660662 PACID_30230 cb1d088a7f1c056b15f2d8c4cb5bf39b 845 Gene3D G3DSA:1.50.10.10 413 736 2.8E-11 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 PACID_30230 cb1d088a7f1c056b15f2d8c4cb5bf39b 845 Pfam PF04685 Glycosyl-hydrolase family 116, catalytic region 491 761 2.6E-39 T 14-10-2018 IPR006775 Glycosyl-hydrolase family 116, catalytic region GO:0004553 KEGG: 00511+3.2.1.45|KEGG: 00600+3.2.1.45|Reactome: R-HSA-1660662 PACID_34100 7740165ead580c3943e479ff290bfc71 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 51 7.6E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_34100 7740165ead580c3943e479ff290bfc71 328 Pfam PF13377 Periplasmic binding protein-like domain 171 328 7.7E-22 T 14-10-2018 PACID_34100 7740165ead580c3943e479ff290bfc71 328 SMART SM00354 4 74 1.3E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_34100 7740165ead580c3943e479ff290bfc71 328 SUPERFAMILY SSF53822 64 328 2.36E-39 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_34100 7740165ead580c3943e479ff290bfc71 328 Gene3D G3DSA:3.40.50.2300 162 288 1.2E-42 T 14-10-2018 PACID_34100 7740165ead580c3943e479ff290bfc71 328 Gene3D G3DSA:3.40.50.2300 64 302 1.2E-42 T 14-10-2018 PACID_34100 7740165ead580c3943e479ff290bfc71 328 Gene3D G3DSA:1.10.260.40 1 61 1.1E-17 T 14-10-2018 PACID_34100 7740165ead580c3943e479ff290bfc71 328 SUPERFAMILY SSF47413 4 62 6.29E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_29130 4459eb86bb33c98ec81594eb7c9d443b 234 Pfam PF00027 Cyclic nucleotide-binding domain 34 122 2.7E-19 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PACID_29130 4459eb86bb33c98ec81594eb7c9d443b 234 Gene3D G3DSA:2.60.120.10 6 152 1.9E-32 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_29130 4459eb86bb33c98ec81594eb7c9d443b 234 Gene3D G3DSA:1.10.10.10 153 232 5.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_29130 4459eb86bb33c98ec81594eb7c9d443b 234 SMART SM00100 13 135 9.5E-18 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PACID_29130 4459eb86bb33c98ec81594eb7c9d443b 234 SUPERFAMILY SSF51206 11 144 4.71E-26 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PACID_29130 4459eb86bb33c98ec81594eb7c9d443b 234 SMART SM00419 176 224 6.0E-11 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PACID_29130 4459eb86bb33c98ec81594eb7c9d443b 234 Pfam PF13545 Crp-like helix-turn-helix domain 156 229 3.2E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PACID_29130 4459eb86bb33c98ec81594eb7c9d443b 234 SUPERFAMILY SSF46785 152 229 1.36E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_24580 cf86f04ea3f040f5308848d5563c1c03 464 Gene3D G3DSA:3.40.309.10 243 422 2.1E-114 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_24580 cf86f04ea3f040f5308848d5563c1c03 464 Pfam PF00171 Aldehyde dehydrogenase family 13 299 3.8E-27 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_24580 cf86f04ea3f040f5308848d5563c1c03 464 Gene3D G3DSA:3.40.605.10 36 242 2.1E-114 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_24580 cf86f04ea3f040f5308848d5563c1c03 464 SUPERFAMILY SSF53720 12 458 7.2E-65 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_24580 cf86f04ea3f040f5308848d5563c1c03 464 PIRSF PIRSF036410 4 464 5.6E-194 T 14-10-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Gene3D G3DSA:3.40.50.11220 241 351 8.9E-26 T 14-10-2018 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 SUPERFAMILY SSF159672 244 449 4.97E-45 T 14-10-2018 IPR038029 GbiG N-terminal domain superfamily KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Gene3D G3DSA:3.30.420.180 433 561 1.3E-36 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 SUPERFAMILY SSF53790 9 196 9.03E-21 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 SUPERFAMILY SSF159664 435 560 1.7E-34 T 14-10-2018 IPR036518 CobE/GbiG C-terminal domain superfamily GO:0009236 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 565 805 5.8E-77 T 14-10-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Gene3D G3DSA:3.40.1010.10 562 671 6.4E-30 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Gene3D G3DSA:3.30.950.10 672 807 3.6E-48 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 SUPERFAMILY SSF53790 562 796 5.37E-53 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Pfam PF11760 Cobalamin synthesis G N-terminal 279 356 4.1E-31 T 14-10-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Pfam PF01890 Cobalamin synthesis G C-terminus 442 556 1.0E-30 T 14-10-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 10 175 1.6E-27 T 14-10-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Gene3D G3DSA:3.40.1010.10 4 95 1.6E-7 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 564 768 1.3E-39 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PACID_08830 4e5c2b2ef7ea06751592250dbf60a039 857 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 55 173 3.5E-12 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PACID_19280 666d0a0b9e3059ea2480984994ee50cb 237 Hamap MF_00722 Endonuclease NucS [nucS]. 1 229 29.941 T 14-10-2018 IPR002793 Endonuclease NucS GO:0004519 PACID_19280 666d0a0b9e3059ea2480984994ee50cb 237 SUPERFAMILY SSF52980 133 223 6.97E-5 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_19280 666d0a0b9e3059ea2480984994ee50cb 237 Gene3D G3DSA:3.40.1350.10 110 223 4.1E-26 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 PACID_19280 666d0a0b9e3059ea2480984994ee50cb 237 Gene3D G3DSA:2.70.180.20 1 82 7.9E-19 T 14-10-2018 PACID_19280 666d0a0b9e3059ea2480984994ee50cb 237 Pfam PF01939 Endonuclease NucS 1 237 4.2E-73 T 14-10-2018 IPR002793 Endonuclease NucS GO:0004519 PACID_31800 c75f06a63c50db13fb9a128796539c0d 599 SUPERFAMILY SSF51445 42 523 1.95E-143 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31800 c75f06a63c50db13fb9a128796539c0d 599 SMART SM00642 51 465 1.7E-142 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_31800 c75f06a63c50db13fb9a128796539c0d 599 Pfam PF11941 Domain of unknown function (DUF3459) 509 597 5.7E-10 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PACID_31800 c75f06a63c50db13fb9a128796539c0d 599 SUPERFAMILY SSF51011 526 597 2.59E-6 T 14-10-2018 PACID_31800 c75f06a63c50db13fb9a128796539c0d 599 Gene3D G3DSA:3.90.400.10 143 225 4.3E-182 T 14-10-2018 PACID_31800 c75f06a63c50db13fb9a128796539c0d 599 Pfam PF00128 Alpha amylase, catalytic domain 66 422 3.0E-108 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_31800 c75f06a63c50db13fb9a128796539c0d 599 Gene3D G3DSA:3.20.20.80 43 517 4.3E-182 T 14-10-2018 PACID_11660 15fbdf1585ced95d1818b697d15bcd1a 253 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 76 248 5.1E-44 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PACID_11660 15fbdf1585ced95d1818b697d15bcd1a 253 Gene3D G3DSA:3.40.50.450 53 250 1.1E-63 T 14-10-2018 PACID_11660 15fbdf1585ced95d1818b697d15bcd1a 253 Pfam PF03641 Possible lysine decarboxylase 118 247 9.3E-31 T 14-10-2018 IPR031100 LOG family PACID_11660 15fbdf1585ced95d1818b697d15bcd1a 253 SUPERFAMILY SSF102405 46 247 3.36E-62 T 14-10-2018 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 PIRSF PIRSF001604 6 728 1.2E-223 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Gene3D G3DSA:1.10.287.610 3 77 2.6E-24 T 14-10-2018 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 651 722 6.4E-10 T 14-10-2018 IPR001357 BRCT domain PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 330 406 3.5E-29 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Gene3D G3DSA:3.30.470.90 80 326 3.7E-98 T 14-10-2018 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 16 326 3.6E-118 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 SMART SM00532 14 457 3.2E-243 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 SUPERFAMILY SSF47781 411 640 4.77E-42 T 14-10-2018 IPR010994 RuvA domain 2-like PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Gene3D G3DSA:3.40.50.10190 649 731 1.6E-22 T 14-10-2018 IPR036420 BRCT domain superfamily PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 SMART SM00292 649 726 3.8E-11 T 14-10-2018 IPR001357 BRCT domain PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 339 354 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 25 473 8.3E-171 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 SUPERFAMILY SSF52113 648 726 2.06E-17 T 14-10-2018 IPR036420 BRCT domain superfamily PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Gene3D G3DSA:1.10.150.20 561 642 1.7E-27 T 14-10-2018 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 124 153 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 SUPERFAMILY SSF50249 326 408 2.91E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Pfam PF12826 Helix-hairpin-helix motif 567 630 3.1E-22 T 14-10-2018 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Gene3D G3DSA:2.40.50.140 327 413 1.1E-32 T 14-10-2018 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 SUPERFAMILY SSF56091 14 324 1.79E-112 T 14-10-2018 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 416 442 3.7E-6 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 PACID_23100 b0f01a07aa2e4cbd83dd2caf59a26805 734 Hamap MF_01588 DNA ligase [ligA]. 13 723 49.871 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 SUPERFAMILY SSF51445 11 318 2.42E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 118 134 1.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 219 237 1.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 36 52 1.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 149 165 1.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 PRINTS PR00133 Glycosyl hydrolase family 3 signature 72 91 1.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 SMART SM01217 597 667 6.5E-24 T 14-10-2018 IPR026891 Fibronectin type III-like domain PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 319 563 3.6E-52 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 Gene3D G3DSA:3.40.50.1700 304 562 1.4E-73 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 Pfam PF14310 Fibronectin type III-like domain 597 667 6.4E-21 T 14-10-2018 IPR026891 Fibronectin type III-like domain PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 SUPERFAMILY SSF52279 319 566 1.27E-49 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 27 287 3.6E-50 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 Gene3D G3DSA:2.60.40.10 563 678 1.3E-33 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_01920 b6b82250dccc9863c1dc703f72956c55 767 Gene3D G3DSA:3.20.20.300 7 293 1.7E-101 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 PACID_34070 6f9c7d1cedf7c5393a7a553cf3de68c8 330 SUPERFAMILY SSF51735 2 148 1.25E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_34070 6f9c7d1cedf7c5393a7a553cf3de68c8 330 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 163 239 2.5E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_34070 6f9c7d1cedf7c5393a7a553cf3de68c8 330 Gene3D G3DSA:3.30.360.10 139 269 2.8E-92 T 14-10-2018 PACID_34070 6f9c7d1cedf7c5393a7a553cf3de68c8 330 SUPERFAMILY SSF55347 125 302 7.98E-30 T 14-10-2018 PACID_34070 6f9c7d1cedf7c5393a7a553cf3de68c8 330 Gene3D G3DSA:3.40.50.720 3 318 2.8E-92 T 14-10-2018 PACID_34070 6f9c7d1cedf7c5393a7a553cf3de68c8 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 1.9E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 Gene3D G3DSA:1.10.10.10 21 154 2.8E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 SMART SM00347 37 137 5.7E-21 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 97 113 3.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 127 147 3.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 61 77 3.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 93 3.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 Pfam PF01047 MarR family 45 101 2.2E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_25200 239cfdd47cf0c6d8998235ff6c6ac835 161 SUPERFAMILY SSF46785 25 153 6.04E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_01530 70da00a77f59e08aaceea8463676664f 377 Gene3D G3DSA:2.160.20.20 62 377 1.1E-11 T 14-10-2018 IPR012332 P22 tailspike-like, C-terminal domain superfamily PACID_01530 70da00a77f59e08aaceea8463676664f 377 SUPERFAMILY SSF51126 33 285 1.06E-6 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor PACID_04280 ad3024b12cd1f7095c86bcd81002f281 344 SUPERFAMILY SSF51735 140 308 3.13E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_04280 ad3024b12cd1f7095c86bcd81002f281 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 2.0E-22 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_04280 ad3024b12cd1f7095c86bcd81002f281 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_04280 ad3024b12cd1f7095c86bcd81002f281 344 Pfam PF00107 Zinc-binding dehydrogenase 177 303 1.7E-14 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_04280 ad3024b12cd1f7095c86bcd81002f281 344 Gene3D G3DSA:3.40.50.720 153 289 2.3E-100 T 14-10-2018 PACID_04280 ad3024b12cd1f7095c86bcd81002f281 344 Gene3D G3DSA:3.90.180.10 9 328 2.3E-100 T 14-10-2018 PACID_04280 ad3024b12cd1f7095c86bcd81002f281 344 SUPERFAMILY SSF50129 2 174 7.32E-48 T 14-10-2018 IPR011032 GroES-like superfamily PACID_04280 ad3024b12cd1f7095c86bcd81002f281 344 SMART SM00829 9 334 6.3E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PIRSF PIRSF000350 1 460 4.6E-80 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 455 2.7E-21 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 SUPERFAMILY SSF55424 343 460 2.23E-25 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 35 50 3.1E-49 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 3.1E-49 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 3.1E-49 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 307 314 3.1E-49 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 264 278 3.1E-49 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 3.1E-49 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.1E-49 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 3.1E-49 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 292 314 1.4E-33 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.4E-33 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 1.4E-33 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 279 1.4E-33 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 1.4E-33 T 14-10-2018 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 Gene3D G3DSA:3.50.50.60 154 272 6.2E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 Gene3D G3DSA:3.50.50.60 5 330 6.2E-100 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 SUPERFAMILY SSF51905 5 337 3.21E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 327 2.8E-57 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_24290 ce2229d33d25bdf3d7e0f9f466002b59 464 Gene3D G3DSA:3.30.390.30 340 460 1.4E-32 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 SUPERFAMILY SSF55874 311 467 2.1E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 320 1.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 SMART SM00388 251 321 3.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 SUPERFAMILY SSF47384 234 320 4.51E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 427 445 4.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 4.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 4.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 451 464 4.0E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 SMART SM00304 198 250 7.2E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 Gene3D G3DSA:3.30.565.10 324 473 2.0E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 Pfam PF00672 HAMP domain 198 245 5.9E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 SMART SM00387 361 467 1.8E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 466 3.8E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 SUPERFAMILY SSF158472 198 247 1.18E-8 T 14-10-2018 PACID_32190 be38120054bbb0b671e25fd724df6fb4 479 Gene3D G3DSA:1.10.287.130 202 320 5.2E-27 T 14-10-2018 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 192 204 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 192 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 176 1.2E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 Pfam PF00072 Response regulator receiver domain 13 122 8.8E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 SMART SM00421 159 216 1.1E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 Gene3D G3DSA:3.40.50.12740 11 221 4.5E-55 T 14-10-2018 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 SUPERFAMILY SSF52172 9 129 2.13E-27 T 14-10-2018 IPR011006 CheY-like superfamily PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 SMART SM00448 11 123 2.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 SUPERFAMILY SSF46894 155 221 8.84E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 ProSitePatterns PS00622 LuxR-type HTH domain signature. 176 203 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_12450 24efcea8cbeb2a21ab7e44472991d034 224 Pfam PF00196 Bacterial regulatory proteins, luxR family 161 216 1.4E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 Pfam PF00005 ABC transporter 400 549 4.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 Gene3D G3DSA:3.40.50.300 22 352 6.7E-92 T 14-10-2018 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 Gene3D G3DSA:3.40.50.300 369 703 6.3E-95 T 14-10-2018 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 601 663 4.1E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 253 318 3.3E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 SUPERFAMILY SSF52540 24 271 2.11E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 Pfam PF00005 ABC transporter 45 201 2.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 SUPERFAMILY SSF52540 371 621 2.44E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 SMART SM00382 408 599 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 SMART SM00382 53 259 1.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 ProSitePatterns PS00211 ABC transporters family signature. 522 536 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 251 338 1.8E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_25470 bc4b1dc41eb14f45941dd7de89118d0e 704 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 599 697 2.1E-22 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_26490 41af81ff755c380d555d9c2744d265f7 232 Pfam PF01209 ubiE/COQ5 methyltransferase family 12 231 1.1E-59 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PACID_26490 41af81ff755c380d555d9c2744d265f7 232 SUPERFAMILY SSF53335 4 227 1.98E-47 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_26490 41af81ff755c380d555d9c2744d265f7 232 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 139 153 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PACID_26490 41af81ff755c380d555d9c2744d265f7 232 Gene3D G3DSA:3.40.50.150 21 232 1.0E-59 T 14-10-2018 PACID_26490 41af81ff755c380d555d9c2744d265f7 232 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 15 231 3.0E-68 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PACID_26490 41af81ff755c380d555d9c2744d265f7 232 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 6 231 33.427 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Pfam PF04565 RNA polymerase Rpb2, domain 3 424 492 1.7E-29 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Gene3D G3DSA:2.40.50.150 740 866 0.0 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Gene3D G3DSA:2.30.150.10 505 572 0.0 T 14-10-2018 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Pfam PF10385 RNA polymerase beta subunit external 1 domain 502 568 1.8E-27 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 ProSitePatterns PS01166 RNA polymerases beta chain signature. 868 880 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Gene3D G3DSA:2.40.270.10 24 1025 0.0 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 SUPERFAMILY SSF64484 20 1133 0.0 T 14-10-2018 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Gene3D G3DSA:3.90.1110.10 173 359 0.0 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Gene3D G3DSA:3.90.1100.10 26 629 0.0 T 14-10-2018 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 235 841 7.6E-301 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Gene3D G3DSA:2.40.50.100 630 704 0.0 T 14-10-2018 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 21 1125 12.299 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Pfam PF04563 RNA polymerase beta subunit 35 411 2.4E-25 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Pfam PF04561 RNA polymerase Rpb2, domain 2 168 365 1.9E-31 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Gene3D G3DSA:3.90.1800.10 1034 1088 8.9E-10 T 14-10-2018 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Pfam PF00562 RNA polymerase Rpb2, domain 6 630 1047 4.9E-158 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25920 8b714132cae7da3be82c4f1833adbe9a 1160 Pfam PF04560 RNA polymerase Rpb2, domain 7 1049 1123 7.3E-26 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_13740 44c087ff4cab197c75b104b1351e62ad 233 SUPERFAMILY SSF52833 2 208 4.0E-48 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_13740 44c087ff4cab197c75b104b1351e62ad 233 Gene3D G3DSA:3.40.30.10 1 208 8.9E-76 T 14-10-2018 PACID_13740 44c087ff4cab197c75b104b1351e62ad 233 Pfam PF01323 DSBA-like thioredoxin domain 2 204 1.3E-42 T 14-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 PACID_09740 b75da04af991d22588af5567f04d7feb 213 Pfam PF00072 Response regulator receiver domain 3 108 1.9E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_09740 b75da04af991d22588af5567f04d7feb 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 5.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_09740 b75da04af991d22588af5567f04d7feb 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 5.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_09740 b75da04af991d22588af5567f04d7feb 213 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 5.0E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_09740 b75da04af991d22588af5567f04d7feb 213 SMART SM00421 147 204 2.6E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_09740 b75da04af991d22588af5567f04d7feb 213 SMART SM00448 1 120 1.1E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_09740 b75da04af991d22588af5567f04d7feb 213 Gene3D G3DSA:1.10.10.10 143 213 3.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_09740 b75da04af991d22588af5567f04d7feb 213 SUPERFAMILY SSF52172 1 168 5.31E-23 T 14-10-2018 IPR011006 CheY-like superfamily PACID_09740 b75da04af991d22588af5567f04d7feb 213 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 198 8.6E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_09740 b75da04af991d22588af5567f04d7feb 213 Gene3D G3DSA:3.40.50.2300 1 142 3.0E-25 T 14-10-2018 PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 SMART SM00382 290 484 4.9E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 SMART SM00382 35 224 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 SUPERFAMILY SSF52540 275 492 5.33E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 Pfam PF00005 ABC transporter 26 176 1.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 SUPERFAMILY SSF52540 9 235 4.77E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 ProSitePatterns PS00211 ABC transporters family signature. 408 422 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 Gene3D G3DSA:3.40.50.300 269 498 2.7E-46 T 14-10-2018 PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 Pfam PF00005 ABC transporter 282 435 2.3E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_26210 bdda2aeab4fd478d2c326cd57d3c47cb 511 Gene3D G3DSA:3.40.50.300 2 261 4.5E-53 T 14-10-2018 PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 Gene3D G3DSA:1.10.3090.10 199 494 2.7E-44 T 14-10-2018 PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 Gene3D G3DSA:3.30.460.10 30 192 3.9E-33 T 14-10-2018 PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 TIGRFAM TIGR00277 HDIG: HDIG domain 295 366 2.1E-14 T 14-10-2018 IPR006675 HDIG domain PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 Pfam PF01966 HD domain 298 423 8.1E-14 T 14-10-2018 IPR006674 HD domain PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 SUPERFAMILY SSF81891 194 510 2.75E-64 T 14-10-2018 PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 TIGRFAM TIGR02692 tRNA_CCA_actino: CCA tRNA nucleotidyltransferase 128 508 5.4E-196 T 14-10-2018 IPR014065 tRNA adenylyltransferase PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 223 284 8.8E-19 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 SUPERFAMILY SSF81301 35 192 4.8E-31 T 14-10-2018 PACID_33620 c4d43496ebb33fc4a375c9cecdb4c52f 515 Pfam PF01743 Poly A polymerase head domain 51 196 9.0E-27 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 PACID_33150 816f7003a54a0d47bc29cd577da15871 371 Gene3D G3DSA:3.40.50.720 130 305 1.5E-128 T 14-10-2018 PACID_33150 816f7003a54a0d47bc29cd577da15871 371 SUPERFAMILY SSF51735 137 303 3.49E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_33150 816f7003a54a0d47bc29cd577da15871 371 SMART SM01003 4 137 8.6E-76 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PACID_33150 816f7003a54a0d47bc29cd577da15871 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 1.8E-46 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PACID_33150 816f7003a54a0d47bc29cd577da15871 371 PIRSF PIRSF000183 1 371 1.1E-150 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 PACID_33150 816f7003a54a0d47bc29cd577da15871 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 PACID_33150 816f7003a54a0d47bc29cd577da15871 371 SMART SM01002 149 297 4.6E-71 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PACID_33150 816f7003a54a0d47bc29cd577da15871 371 SUPERFAMILY SSF52283 1 359 2.47E-61 T 14-10-2018 PACID_33150 816f7003a54a0d47bc29cd577da15871 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 360 2.6E-151 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 PACID_33150 816f7003a54a0d47bc29cd577da15871 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 349 1.0E-72 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PACID_33150 816f7003a54a0d47bc29cd577da15871 371 Gene3D G3DSA:3.40.50.720 3 349 1.5E-128 T 14-10-2018 PACID_33150 816f7003a54a0d47bc29cd577da15871 371 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 PIRSF PIRSF000110 8 516 6.4E-176 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 Gene3D G3DSA:3.40.50.720 29 206 1.6E-52 T 14-10-2018 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 35 218 8.4E-60 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 Gene3D G3DSA:3.30.360.10 207 515 3.2E-120 T 14-10-2018 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 208 214 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 174 187 1.9E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 268 284 1.9E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 250 267 1.9E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 357 383 1.9E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 198 226 1.9E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 SUPERFAMILY SSF51735 21 221 1.28E-59 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_22670 c4bfc209336af775271b1d844d04ae68 516 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 31 515 86.105 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 SUPERFAMILY SSF55347 208 514 5.56E-114 T 14-10-2018 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 31 515 2.7E-196 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_22670 c4bfc209336af775271b1d844d04ae68 516 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 220 514 6.9E-111 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 PACID_20650 fd0a0200fd683ea7a82f9bf3407dea4e 172 Pfam PF10369 Small subunit of acetolactate synthase 86 159 3.9E-26 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PACID_20650 fd0a0200fd683ea7a82f9bf3407dea4e 172 SUPERFAMILY SSF55021 81 161 3.2E-24 T 14-10-2018 PACID_20650 fd0a0200fd683ea7a82f9bf3407dea4e 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 5 79 8.0E-22 T 14-10-2018 PACID_20650 fd0a0200fd683ea7a82f9bf3407dea4e 172 Gene3D G3DSA:3.30.70.1150 85 164 2.1E-27 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal PACID_20650 fd0a0200fd683ea7a82f9bf3407dea4e 172 SUPERFAMILY SSF55021 5 77 3.77E-21 T 14-10-2018 PACID_20650 fd0a0200fd683ea7a82f9bf3407dea4e 172 Gene3D G3DSA:3.30.70.260 2 81 2.1E-33 T 14-10-2018 PACID_20650 fd0a0200fd683ea7a82f9bf3407dea4e 172 Pfam PF13710 ACT domain 13 76 1.0E-15 T 14-10-2018 PACID_20650 fd0a0200fd683ea7a82f9bf3407dea4e 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 4 159 2.5E-57 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 Gene3D G3DSA:3.40.605.10 562 985 6.3E-107 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 PIRSF PIRSF000197 147 1198 4.9E-261 T 14-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 765 772 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 Pfam PF01619 Proline dehydrogenase 190 480 5.1E-62 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 793 804 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 Pfam PF00171 Aldehyde dehydrogenase family 562 985 8.4E-102 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 Gene3D G3DSA:3.20.20.220 128 515 2.7E-106 T 14-10-2018 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 SUPERFAMILY SSF53720 562 985 2.75E-98 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 SUPERFAMILY SSF51730 190 516 5.89E-74 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like PACID_11380 bb3666193269a6c09835adda215bc3fa 1200 Gene3D G3DSA:3.40.309.10 769 960 6.3E-107 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_19150 0da9b14347ac76463545aa6cf2b224e8 451 Pfam PF01636 Phosphotransferase enzyme family 139 381 1.1E-6 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PACID_19150 0da9b14347ac76463545aa6cf2b224e8 451 Gene3D G3DSA:3.90.1200.10 221 447 4.7E-68 T 14-10-2018 PACID_19150 0da9b14347ac76463545aa6cf2b224e8 451 SUPERFAMILY SSF56112 131 396 2.04E-16 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 54 69 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 397 59.292 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 Pfam PF03144 Elongation factor Tu domain 2 228 296 3.8E-18 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 SUPERFAMILY SSF50465 303 396 7.19E-34 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 Gene3D G3DSA:2.40.30.10 341 396 1.0E-28 T 14-10-2018 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 SUPERFAMILY SSF50447 208 302 2.75E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 Pfam PF03143 Elongation factor Tu C-terminal domain 303 395 2.8E-31 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 Gene3D G3DSA:2.40.30.10 209 337 3.0E-52 T 14-10-2018 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 SUPERFAMILY SSF52540 9 229 3.98E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 PRINTS PR00315 GTP-binding elongation factor signature 97 108 2.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 PRINTS PR00315 GTP-binding elongation factor signature 81 91 2.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 PRINTS PR00315 GTP-binding elongation factor signature 134 143 2.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 PRINTS PR00315 GTP-binding elongation factor signature 61 69 2.1E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 151 2.7E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 Pfam PF00009 Elongation factor Tu GTP binding domain 10 204 2.8E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 Gene3D G3DSA:3.40.50.300 1 206 3.0E-71 T 14-10-2018 PACID_25830 a54a81a19c6e883d592a35bc69311a59 397 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 397 2.2E-220 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PACID_18080 8467d6f543223661208f6cec0f24d077 205 SUPERFAMILY SSF54211 3 86 6.7E-31 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_18080 8467d6f543223661208f6cec0f24d077 205 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 164 176 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PACID_18080 8467d6f543223661208f6cec0f24d077 205 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 182 9.3E-56 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PACID_18080 8467d6f543223661208f6cec0f24d077 205 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PACID_18080 8467d6f543223661208f6cec0f24d077 205 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 203 39.934 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 PACID_18080 8467d6f543223661208f6cec0f24d077 205 SUPERFAMILY SSF54211 88 186 5.01E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_18080 8467d6f543223661208f6cec0f24d077 205 Gene3D G3DSA:3.30.230.40 1 90 1.9E-34 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 PACID_18080 8467d6f543223661208f6cec0f24d077 205 Gene3D G3DSA:3.30.230.40 91 203 3.0E-34 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 PACID_18600 c0faa8a67052cbba4d737cf8c78b30aa 462 Gene3D G3DSA:3.40.640.10 103 453 1.2E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_18600 c0faa8a67052cbba4d737cf8c78b30aa 462 SUPERFAMILY SSF46785 15 86 9.86E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_18600 c0faa8a67052cbba4d737cf8c78b30aa 462 SMART SM00345 25 84 4.9E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_18600 c0faa8a67052cbba4d737cf8c78b30aa 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 24 84 4.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_18600 c0faa8a67052cbba4d737cf8c78b30aa 462 Gene3D G3DSA:1.10.10.10 18 90 1.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18600 c0faa8a67052cbba4d737cf8c78b30aa 462 SUPERFAMILY SSF53383 79 460 5.82E-62 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_18600 c0faa8a67052cbba4d737cf8c78b30aa 462 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 1.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_18600 c0faa8a67052cbba4d737cf8c78b30aa 462 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 1.8E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_15040 8720cbffd96d30feb118ee0a01532093 336 Gene3D G3DSA:3.20.20.100 18 336 1.1E-110 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_15040 8720cbffd96d30feb118ee0a01532093 336 Pfam PF00248 Aldo/keto reductase family 31 331 4.6E-63 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_15040 8720cbffd96d30feb118ee0a01532093 336 SUPERFAMILY SSF51430 16 333 3.8E-89 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_19160 952c68027f43444a44a29270e9425554 650 PIRSF PIRSF000463 8 637 1.1E-277 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PACID_19160 952c68027f43444a44a29270e9425554 650 SUPERFAMILY SSF51445 141 523 6.3E-105 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_19160 952c68027f43444a44a29270e9425554 650 Gene3D G3DSA:2.60.40.1180 525 631 6.7E-33 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_19160 952c68027f43444a44a29270e9425554 650 SMART SM00642 157 517 6.7E-6 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_19160 952c68027f43444a44a29270e9425554 650 Gene3D G3DSA:3.20.20.80 130 524 2.1E-168 T 14-10-2018 PACID_19160 952c68027f43444a44a29270e9425554 650 SUPERFAMILY SSF81296 25 129 2.45E-26 T 14-10-2018 IPR014756 Immunoglobulin E-set PACID_19160 952c68027f43444a44a29270e9425554 650 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 530 628 4.8E-20 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 PACID_19160 952c68027f43444a44a29270e9425554 650 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 29 114 1.4E-16 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PACID_19160 952c68027f43444a44a29270e9425554 650 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 5 630 42.331 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 PACID_19160 952c68027f43444a44a29270e9425554 650 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 16 627 1.5E-262 T 14-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 PACID_19160 952c68027f43444a44a29270e9425554 650 Pfam PF00128 Alpha amylase, catalytic domain 178 247 3.6E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_19160 952c68027f43444a44a29270e9425554 650 Gene3D G3DSA:2.60.40.10 3 128 3.5E-40 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_19160 952c68027f43444a44a29270e9425554 650 SUPERFAMILY SSF51011 525 629 4.14E-28 T 14-10-2018 PACID_04060 3d8e8c95c40c1ddb553a8ae2c5dabbc3 497 Gene3D G3DSA:1.20.1250.20 38 459 6.0E-28 T 14-10-2018 PACID_04060 3d8e8c95c40c1ddb553a8ae2c5dabbc3 497 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 42 475 2.6E-114 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 PACID_04060 3d8e8c95c40c1ddb553a8ae2c5dabbc3 497 Pfam PF13347 MFS/sugar transport protein 42 464 4.5E-82 T 14-10-2018 PACID_04060 3d8e8c95c40c1ddb553a8ae2c5dabbc3 497 SUPERFAMILY SSF103473 39 465 5.49E-40 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_08650 96b31c01629bed5c9b41d0c24a5ec28c 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_08650 96b31c01629bed5c9b41d0c24a5ec28c 345 Gene3D G3DSA:3.90.180.10 21 327 2.8E-95 T 14-10-2018 PACID_08650 96b31c01629bed5c9b41d0c24a5ec28c 345 Gene3D G3DSA:3.40.50.720 154 287 2.8E-95 T 14-10-2018 PACID_08650 96b31c01629bed5c9b41d0c24a5ec28c 345 SUPERFAMILY SSF50129 1 174 1.45E-44 T 14-10-2018 IPR011032 GroES-like superfamily PACID_08650 96b31c01629bed5c9b41d0c24a5ec28c 345 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 341 54.773 T 14-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 PACID_08650 96b31c01629bed5c9b41d0c24a5ec28c 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 133 1.7E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_08650 96b31c01629bed5c9b41d0c24a5ec28c 345 SUPERFAMILY SSF51735 143 304 9.42E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_08650 96b31c01629bed5c9b41d0c24a5ec28c 345 Pfam PF00107 Zinc-binding dehydrogenase 175 303 7.0E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 Pfam PF13180 PDZ domain 486 572 7.2E-16 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 Gene3D G3DSA:2.40.10.10 260 353 4.3E-23 T 14-10-2018 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 SMART SM00228 485 563 8.9E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 PRINTS PR00834 HtrA/DegQ protease family signature 364 388 1.0E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 PRINTS PR00834 HtrA/DegQ protease family signature 432 449 1.0E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 PRINTS PR00834 HtrA/DegQ protease family signature 521 533 1.0E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 PRINTS PR00834 HtrA/DegQ protease family signature 300 312 1.0E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 PRINTS PR00834 HtrA/DegQ protease family signature 322 342 1.0E-33 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 Gene3D G3DSA:2.30.42.10 483 577 5.9E-21 T 14-10-2018 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 Pfam PF13365 Trypsin-like peptidase domain 291 439 3.3E-32 T 14-10-2018 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 SUPERFAMILY SSF50494 252 494 1.82E-54 T 14-10-2018 IPR009003 Peptidase S1, PA clan PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 SUPERFAMILY SSF50156 467 571 2.23E-19 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PACID_33760 a52afc81a9f690141ae9d0c098816c17 577 Gene3D G3DSA:2.40.10.10 354 482 5.8E-43 T 14-10-2018 PACID_12600 e8df6fd8c327d83666f53b35a56b7e65 242 SUPERFAMILY SSF53474 19 236 1.83E-34 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_12600 e8df6fd8c327d83666f53b35a56b7e65 242 Pfam PF00561 alpha/beta hydrolase fold 20 119 3.6E-11 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_12600 e8df6fd8c327d83666f53b35a56b7e65 242 Gene3D G3DSA:3.40.50.1820 11 236 1.9E-35 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_19980 0c68b38cb21c03ae5b03fa19955ad384 1156 Pfam PF00582 Universal stress protein family 1029 1119 6.4E-5 T 14-10-2018 IPR006016 UspA PACID_19980 0c68b38cb21c03ae5b03fa19955ad384 1156 Gene3D G3DSA:3.40.50.620 977 1118 2.4E-11 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_19980 0c68b38cb21c03ae5b03fa19955ad384 1156 SUPERFAMILY SSF52402 985 1119 2.09E-11 T 14-10-2018 PACID_19980 0c68b38cb21c03ae5b03fa19955ad384 1156 Pfam PF03699 Uncharacterised protein family (UPF0182) 26 732 1.4E-227 T 14-10-2018 IPR005372 Uncharacterised protein family UPF0182 GO:0016021 PACID_12980 1494f947a637bf4ca7d92d3f4ba35f22 192 SMART SM01012 126 181 6.4E-26 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 PACID_12980 1494f947a637bf4ca7d92d3f4ba35f22 192 PIRSF PIRSF036382 1 187 1.2E-69 T 14-10-2018 IPR008327 Signal transduction response regulator, antiterminator PACID_12980 1494f947a637bf4ca7d92d3f4ba35f22 192 SUPERFAMILY SSF52172 1 181 1.57E-55 T 14-10-2018 IPR011006 CheY-like superfamily PACID_12980 1494f947a637bf4ca7d92d3f4ba35f22 192 Gene3D G3DSA:1.10.10.10 128 188 2.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_12980 1494f947a637bf4ca7d92d3f4ba35f22 192 Pfam PF03861 ANTAR domain 129 181 1.2E-21 T 14-10-2018 IPR005561 ANTAR domain GO:0003723 PACID_12980 1494f947a637bf4ca7d92d3f4ba35f22 192 Pfam PF00072 Response regulator receiver domain 1 110 5.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_12980 1494f947a637bf4ca7d92d3f4ba35f22 192 Gene3D G3DSA:3.40.50.2300 1 127 1.2E-34 T 14-10-2018 PACID_12980 1494f947a637bf4ca7d92d3f4ba35f22 192 SMART SM00448 1 110 4.7E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_34000 0b2fdb93dfc3f4606d09a55346226c09 327 SUPERFAMILY SSF53822 61 319 1.45E-43 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_34000 0b2fdb93dfc3f4606d09a55346226c09 327 Gene3D G3DSA:3.40.50.2300 162 289 7.8E-48 T 14-10-2018 PACID_34000 0b2fdb93dfc3f4606d09a55346226c09 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 50 3.7E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_34000 0b2fdb93dfc3f4606d09a55346226c09 327 SMART SM00354 4 74 5.1E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_34000 0b2fdb93dfc3f4606d09a55346226c09 327 Pfam PF13377 Periplasmic binding protein-like domain 170 327 2.3E-26 T 14-10-2018 PACID_34000 0b2fdb93dfc3f4606d09a55346226c09 327 Gene3D G3DSA:3.40.50.2300 65 306 7.8E-48 T 14-10-2018 PACID_34000 0b2fdb93dfc3f4606d09a55346226c09 327 Gene3D G3DSA:1.10.260.40 1 61 4.5E-17 T 14-10-2018 PACID_34000 0b2fdb93dfc3f4606d09a55346226c09 327 SUPERFAMILY SSF47413 4 62 1.34E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 Pfam PF00083 Sugar (and other) transporter 30 184 1.6E-34 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 Pfam PF00083 Sugar (and other) transporter 217 537 2.3E-51 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 ProSitePatterns PS00217 Sugar transport proteins signature 2. 131 156 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 PRINTS PR00171 Sugar transporter signature 38 48 7.9E-15 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 PRINTS PR00171 Sugar transporter signature 461 473 7.9E-15 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 PRINTS PR00171 Sugar transporter signature 340 350 7.9E-15 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 PRINTS PR00171 Sugar transporter signature 126 145 7.9E-15 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 PRINTS PR00171 Sugar transporter signature 438 459 7.9E-15 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 SUPERFAMILY SSF103473 24 534 1.44E-59 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_06520 5a584650ca08ba1e745dd6bc53ee27f5 554 ProSitePatterns PS00216 Sugar transport proteins signature 1. 89 106 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_06340 fc2f99fdfea451eeb375d3129b2fd013 331 Gene3D G3DSA:3.20.20.100 2 244 1.1E-48 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_06340 fc2f99fdfea451eeb375d3129b2fd013 331 SUPERFAMILY SSF51430 2 215 1.96E-48 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_06340 fc2f99fdfea451eeb375d3129b2fd013 331 Pfam PF00248 Aldo/keto reductase family 14 219 2.2E-40 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_30040 8aaea8521324989b271b029cdec747d9 381 Pfam PF00534 Glycosyl transferases group 1 191 348 4.1E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_30040 8aaea8521324989b271b029cdec747d9 381 Gene3D G3DSA:3.40.50.2000 1 193 1.3E-25 T 14-10-2018 PACID_30040 8aaea8521324989b271b029cdec747d9 381 Pfam PF13439 Glycosyltransferase Family 4 25 186 9.4E-20 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_30040 8aaea8521324989b271b029cdec747d9 381 SUPERFAMILY SSF53756 1 373 4.71E-74 T 14-10-2018 PACID_30040 8aaea8521324989b271b029cdec747d9 381 Gene3D G3DSA:3.40.50.2000 194 356 8.2E-42 T 14-10-2018 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 Gene3D G3DSA:3.30.70.890 167 272 6.4E-77 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 Pfam PF08544 GHMP kinases C terminal 226 269 6.3E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 Hamap MF_00384 Homoserine kinase [thrB]. 10 288 27.113 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 Pfam PF00288 GHMP kinases N terminal domain 88 150 2.6E-6 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 TIGRFAM TIGR00191 thrB: homoserine kinase 9 273 1.1E-59 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 PIRSF PIRSF000676 5 291 2.5E-70 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 Gene3D G3DSA:3.30.230.10 10 166 6.4E-77 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 94 105 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 SUPERFAMILY SSF54211 8 161 2.5E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 SUPERFAMILY SSF55060 173 277 5.28E-22 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 PRINTS PR00958 Homoserine kinase signature 137 150 4.1E-32 T 14-10-2018 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 PRINTS PR00958 Homoserine kinase signature 15 30 4.1E-32 T 14-10-2018 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 PRINTS PR00958 Homoserine kinase signature 101 116 4.1E-32 T 14-10-2018 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 PRINTS PR00958 Homoserine kinase signature 253 268 4.1E-32 T 14-10-2018 PACID_19690 2e42b652cc3965b19beffc21fa325dec 302 PRINTS PR00958 Homoserine kinase signature 176 193 4.1E-32 T 14-10-2018 PACID_23620 48ddf7c759f3490d584b7ce3dec135d3 148 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 114 6.6E-10 T 14-10-2018 PACID_23620 48ddf7c759f3490d584b7ce3dec135d3 148 SUPERFAMILY SSF54593 2 139 7.01E-30 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_23620 48ddf7c759f3490d584b7ce3dec135d3 148 Gene3D G3DSA:3.10.180.10 1 144 9.1E-46 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 Gene3D G3DSA:1.20.58.100 512 629 2.2E-22 T 14-10-2018 PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 Gene3D G3DSA:3.50.50.60 74 487 5.0E-99 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 SUPERFAMILY SSF46977 532 674 6.93E-37 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 Pfam PF00890 FAD binding domain 74 479 4.3E-52 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 Pfam PF02910 Fumarate reductase flavoprotein C-term 541 674 5.7E-33 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 Gene3D G3DSA:3.90.700.10 330 454 5.0E-99 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 SUPERFAMILY SSF56425 299 441 9.72E-33 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 74 674 1.5E-268 T 14-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PACID_18410 8d5aa52c75ba32269b47076077a595f3 675 SUPERFAMILY SSF51905 71 487 8.78E-45 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_21550 441620ad8ad576978def99b3faea85bf 63 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 52 1.6E-19 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21550 441620ad8ad576978def99b3faea85bf 63 SUPERFAMILY SSF57829 2 54 2.62E-16 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 PACID_21550 441620ad8ad576978def99b3faea85bf 63 Pfam PF01783 Ribosomal L32p protein family 2 53 1.9E-21 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21550 441620ad8ad576978def99b3faea85bf 63 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 2 61 16.609 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21360 a741aa17bd927f460750fb1bf6c57645 84 Hamap MF_00088 UPF0109 protein . 2 74 19.7 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 PACID_21360 a741aa17bd927f460750fb1bf6c57645 84 SUPERFAMILY SSF54814 16 62 5.17E-7 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PACID_21360 a741aa17bd927f460750fb1bf6c57645 84 Gene3D G3DSA:3.30.300.20 6 72 3.8E-5 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_21360 a741aa17bd927f460750fb1bf6c57645 84 Pfam PF13083 KH domain 4 71 8.3E-19 T 14-10-2018 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 Gene3D G3DSA:3.90.660.10 39 396 2.8E-118 T 14-10-2018 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 SUPERFAMILY SSF51905 2 446 3.74E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 PRINTS PR00757 Flavin-containing amine oxidase signature 426 443 1.2E-25 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 PRINTS PR00757 Flavin-containing amine oxidase signature 3 22 1.2E-25 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 PRINTS PR00757 Flavin-containing amine oxidase signature 374 393 1.2E-25 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 PRINTS PR00757 Flavin-containing amine oxidase signature 395 417 1.2E-25 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 PRINTS PR00757 Flavin-containing amine oxidase signature 194 216 1.2E-25 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 PRINTS PR00757 Flavin-containing amine oxidase signature 291 310 1.2E-25 T 14-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 Pfam PF01593 Flavin containing amine oxidoreductase 11 444 6.5E-56 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 Gene3D G3DSA:3.50.50.60 3 444 2.8E-118 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_28750 1833b0d2ef8591cc7f85c997d320a41b 448 SUPERFAMILY SSF54373 288 393 4.64E-23 T 14-10-2018 PACID_11540 9df0aa6aa5fcf598032d1d6c09623cfb 157 Pfam PF12802 MarR family 49 105 9.6E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_11540 9df0aa6aa5fcf598032d1d6c09623cfb 157 Gene3D G3DSA:1.10.10.10 24 156 2.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_11540 9df0aa6aa5fcf598032d1d6c09623cfb 157 SMART SM00347 42 141 3.0E-20 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_11540 9df0aa6aa5fcf598032d1d6c09623cfb 157 SUPERFAMILY SSF46785 26 153 2.25E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_11540 9df0aa6aa5fcf598032d1d6c09623cfb 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 131 151 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_11540 9df0aa6aa5fcf598032d1d6c09623cfb 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 101 117 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_11540 9df0aa6aa5fcf598032d1d6c09623cfb 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 97 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_11540 9df0aa6aa5fcf598032d1d6c09623cfb 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 81 1.7E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_00970 2175f741676f573b9203c6377e9f6923 347 SUPERFAMILY SSF51735 5 183 1.14E-26 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_00970 2175f741676f573b9203c6377e9f6923 347 PIRSF PIRSF000114 2 333 6.7E-49 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_00970 2175f741676f573b9203c6377e9f6923 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 1.7E-16 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_00970 2175f741676f573b9203c6377e9f6923 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 141 161 1.7E-16 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_00970 2175f741676f573b9203c6377e9f6923 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 58 85 1.7E-16 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_00970 2175f741676f573b9203c6377e9f6923 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 251 268 1.7E-16 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_00970 2175f741676f573b9203c6377e9f6923 347 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 181 205 1.7E-16 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_00970 2175f741676f573b9203c6377e9f6923 347 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 5 166 2.8E-15 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_00970 2175f741676f573b9203c6377e9f6923 347 Gene3D G3DSA:3.40.50.720 4 186 9.4E-34 T 14-10-2018 PACID_00970 2175f741676f573b9203c6377e9f6923 347 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 188 331 1.6E-33 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_00970 2175f741676f573b9203c6377e9f6923 347 SUPERFAMILY SSF48179 188 332 6.63E-36 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_00970 2175f741676f573b9203c6377e9f6923 347 Gene3D G3DSA:1.10.1040.10 188 339 3.5E-41 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_26610 cdcf18b80ab41cefb3197c4465ac0e5c 313 Pfam PF01545 Cation efflux family 27 220 4.7E-44 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PACID_26610 cdcf18b80ab41cefb3197c4465ac0e5c 313 Gene3D G3DSA:1.20.1510.10 22 219 9.5E-54 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_26610 cdcf18b80ab41cefb3197c4465ac0e5c 313 Pfam PF16916 Dimerisation domain of Zinc Transporter 225 301 5.0E-17 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain PACID_26610 cdcf18b80ab41cefb3197c4465ac0e5c 313 Gene3D G3DSA:3.30.70.1350 220 307 1.1E-22 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PACID_26610 cdcf18b80ab41cefb3197c4465ac0e5c 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 24 292 4.4E-66 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PACID_26610 cdcf18b80ab41cefb3197c4465ac0e5c 313 SUPERFAMILY SSF160240 223 302 9.02E-16 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PACID_26610 cdcf18b80ab41cefb3197c4465ac0e5c 313 SUPERFAMILY SSF161111 23 221 1.06E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 SMART SM01091 347 442 4.9E-15 T 14-10-2018 IPR005170 Transporter-associated domain PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 Pfam PF01595 Domain of unknown function DUF21 10 196 3.7E-37 T 14-10-2018 IPR002550 CNNM, transmembrane domain PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 SUPERFAMILY SSF54631 211 345 5.43E-27 T 14-10-2018 PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 Gene3D G3DSA:3.10.580.10 195 347 1.3E-45 T 14-10-2018 PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 Pfam PF00571 CBS domain 284 333 2.4E-4 T 14-10-2018 IPR000644 CBS domain PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 Pfam PF00571 CBS domain 220 268 0.0074 T 14-10-2018 IPR000644 CBS domain PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 Pfam PF03471 Transporter associated domain 356 441 7.3E-15 T 14-10-2018 IPR005170 Transporter-associated domain PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 Gene3D G3DSA:3.30.465.10 354 440 2.1E-14 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PACID_24520 fb3a4cdc89b91e65b8960476794e0312 457 SUPERFAMILY SSF56176 355 450 4.64E-13 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 320 1.0E-12 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 Pfam PF04055 Radical SAM superfamily 64 220 4.9E-14 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 SMART SM00729 54 264 8.3E-30 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 PIRSF PIRSF001619 1 328 4.9E-98 T 14-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 SMART SM00876 231 322 4.0E-28 T 14-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 TIGRFAM TIGR00433 bioB: biotin synthase 28 320 3.7E-104 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 SUPERFAMILY SSF102114 17 322 3.66E-70 T 14-10-2018 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 Hamap MF_01694 Biotin synthase [bioB]. 14 323 36.933 T 14-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 PACID_10240 d4af942835789a1cd408f4b153f2b62c 359 Gene3D G3DSA:3.20.20.70 17 323 3.2E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_32500 94326ee76741bee71394a6778d0c9842 417 Gene3D G3DSA:3.50.50.60 20 323 5.4E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_32500 94326ee76741bee71394a6778d0c9842 417 Gene3D G3DSA:3.30.390.30 334 417 1.0E-22 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_32500 94326ee76741bee71394a6778d0c9842 417 SUPERFAMILY SSF55424 328 417 2.84E-25 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_32500 94326ee76741bee71394a6778d0c9842 417 Pfam PF14759 Reductase C-terminal 334 416 2.1E-17 T 14-10-2018 IPR028202 Reductase, C-terminal PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 1.0E-17 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 17 39 1.0E-17 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 246 260 1.0E-17 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 1.0E-17 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 17 313 3.9E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_32500 94326ee76741bee71394a6778d0c9842 417 SUPERFAMILY SSF51905 16 348 8.9E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 7.1E-24 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 18 37 7.1E-24 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 7.1E-24 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 7.1E-24 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 245 261 7.1E-24 T 14-10-2018 PACID_32500 94326ee76741bee71394a6778d0c9842 417 Gene3D G3DSA:3.50.50.60 127 252 5.4E-107 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_28010 ee938d3cd7c67118461f23acb565ba6e 212 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 4 212 31.477 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 PACID_28010 ee938d3cd7c67118461f23acb565ba6e 212 SMART SM00881 82 183 2.4E-10 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PACID_28010 ee938d3cd7c67118461f23acb565ba6e 212 Pfam PF02629 CoA binding domain 87 181 1.0E-15 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PACID_28010 ee938d3cd7c67118461f23acb565ba6e 212 Pfam PF06971 Putative DNA-binding protein N-terminus 9 56 7.8E-17 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 PACID_28010 ee938d3cd7c67118461f23acb565ba6e 212 SUPERFAMILY SSF46785 10 82 2.57E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_28010 ee938d3cd7c67118461f23acb565ba6e 212 Gene3D G3DSA:1.10.10.10 8 79 2.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_28010 ee938d3cd7c67118461f23acb565ba6e 212 SUPERFAMILY SSF51735 87 207 3.28E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_28010 ee938d3cd7c67118461f23acb565ba6e 212 Gene3D G3DSA:3.40.50.720 85 212 1.5E-37 T 14-10-2018 PACID_12490 86bb659624e8cb9fb93d7df51e72c61a 486 Pfam PF00069 Protein kinase domain 19 277 2.9E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_12490 86bb659624e8cb9fb93d7df51e72c61a 486 SMART SM00220 19 292 8.2E-48 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_12490 86bb659624e8cb9fb93d7df51e72c61a 486 Gene3D G3DSA:1.10.510.10 101 290 2.2E-46 T 14-10-2018 PACID_12490 86bb659624e8cb9fb93d7df51e72c61a 486 PIRSF PIRSF000654 29 290 8.0E-28 T 14-10-2018 PACID_12490 86bb659624e8cb9fb93d7df51e72c61a 486 Gene3D G3DSA:3.30.200.20 8 98 5.7E-30 T 14-10-2018 PACID_12490 86bb659624e8cb9fb93d7df51e72c61a 486 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 138 150 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PACID_12490 86bb659624e8cb9fb93d7df51e72c61a 486 SUPERFAMILY SSF56112 16 287 4.79E-70 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Gene3D G3DSA:3.90.580.10 1 102 4.7E-36 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 PIRSF PIRSF002811 2 614 4.2E-144 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 SUPERFAMILY SSF57783 4 98 3.06E-32 T 14-10-2018 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 7.1E-108 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Pfam PF08278 DNA primase DnaG DnaB-binding 480 602 4.3E-11 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 250 5.8E-32 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 SMART SM00766 478 604 9.1E-15 T 14-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 SMART SM00400 37 91 2.9E-31 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Pfam PF10410 DnaB-helicase binding domain of primase 373 427 1.2E-13 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 SUPERFAMILY SSF56731 116 425 8.37E-88 T 14-10-2018 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Gene3D G3DSA:3.40.1360.10 240 370 4.9E-35 T 14-10-2018 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Hamap MF_00974 DNA primase [dnaG]. 4 605 25.238 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Pfam PF13662 Toprim domain 259 329 9.0E-15 T 14-10-2018 IPR006171 TOPRIM domain PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 SMART SM00493 258 336 8.7E-12 T 14-10-2018 IPR006171 TOPRIM domain PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Gene3D G3DSA:3.90.980.10 111 239 9.8E-30 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily PACID_18510 2b51b3d1e69dca86aab71e881c3c5783 628 Pfam PF01807 CHC2 zinc finger 6 99 8.3E-33 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 PACID_13290 7ffd4de7daedf44decd98f7a15f665d9 242 Pfam PF10105 Uncharacterized protein conserved in bacteria (DUF2344) 1 164 4.1E-42 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 PACID_13290 7ffd4de7daedf44decd98f7a15f665d9 242 TIGRFAM TIGR03936 sam_1_link_chp: radical SAM-linked protein 1 199 5.5E-50 T 14-10-2018 IPR018768 Domain of unknown function DUF2344 PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 Gene3D G3DSA:3.30.70.2740 388 466 4.3E-7 T 14-10-2018 PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 SUPERFAMILY SSF55103 242 509 2.94E-53 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 602 613 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 SUPERFAMILY SSF46548 532 620 1.67E-8 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 Pfam PF01565 FAD binding domain 51 188 7.1E-35 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 Gene3D G3DSA:3.30.465.40 26 270 7.4E-45 T 14-10-2018 PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 Pfam PF13183 4Fe-4S dicluster domain 537 616 6.7E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 Pfam PF02913 FAD linked oxidases, C-terminal domain 264 504 1.3E-47 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PACID_23220 811b6417884f35ca0b3d073707c4b73e 955 SUPERFAMILY SSF56176 31 262 1.17E-48 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PACID_23320 0392e604e5d70d4588a251cfa24d635e 229 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 226 9.6E-66 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 PACID_23320 0392e604e5d70d4588a251cfa24d635e 229 Gene3D G3DSA:3.40.50.1860 104 214 4.7E-80 T 14-10-2018 PACID_23320 0392e604e5d70d4588a251cfa24d635e 229 Gene3D G3DSA:3.40.50.1860 4 223 4.7E-80 T 14-10-2018 PACID_23320 0392e604e5d70d4588a251cfa24d635e 229 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 223 3.1E-57 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23320 0392e604e5d70d4588a251cfa24d635e 229 SUPERFAMILY SSF53681 119 226 2.94E-32 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23320 0392e604e5d70d4588a251cfa24d635e 229 SUPERFAMILY SSF53681 1 116 6.21E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_00410 163ebdb98b01d56c393884da7d885b0a 392 Gene3D G3DSA:3.20.20.210 1 392 1.0E-84 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PACID_00410 163ebdb98b01d56c393884da7d885b0a 392 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 197 375 5.7E-7 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PACID_00410 163ebdb98b01d56c393884da7d885b0a 392 SUPERFAMILY SSF51726 5 389 1.7E-49 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 Pfam PF13380 CoA binding domain 13 137 6.5E-26 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 Gene3D G3DSA:3.40.50.720 3 132 1.5E-43 T 14-10-2018 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 SUPERFAMILY SSF52210 132 292 1.57E-42 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 Gene3D G3DSA:3.30.470.20 488 697 1.4E-75 T 14-10-2018 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 154 291 5.3E-49 T 14-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 SUPERFAMILY SSF56059 489 711 1.13E-43 T 14-10-2018 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 SUPERFAMILY SSF51735 5 133 1.53E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 SUPERFAMILY SSF52210 300 446 1.44E-36 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 SMART SM00881 8 103 4.9E-38 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 Pfam PF13549 ATP-grasp domain 485 699 8.7E-73 T 14-10-2018 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 Gene3D G3DSA:3.40.50.261 296 461 8.5E-47 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 Gene3D G3DSA:3.40.50.261 133 294 4.3E-55 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_02150 77ab0c9ab815d3d71cf17ded7b8cbaf0 721 Gene3D G3DSA:3.30.1490.20 506 583 1.4E-75 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PACID_07980 e1d4d93a85102c6515540db84816b0c8 524 Pfam PF01039 Carboxyl transferase domain 38 522 2.2E-188 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PACID_07980 e1d4d93a85102c6515540db84816b0c8 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 105 119 1.2E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PACID_07980 e1d4d93a85102c6515540db84816b0c8 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 139 157 1.2E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PACID_07980 e1d4d93a85102c6515540db84816b0c8 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 175 192 1.2E-5 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PACID_07980 e1d4d93a85102c6515540db84816b0c8 524 Gene3D G3DSA:3.90.226.10 2 262 3.9E-95 T 14-10-2018 PACID_07980 e1d4d93a85102c6515540db84816b0c8 524 SUPERFAMILY SSF52096 13 259 5.6E-75 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_07980 e1d4d93a85102c6515540db84816b0c8 524 SUPERFAMILY SSF52096 271 524 1.81E-93 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_07980 e1d4d93a85102c6515540db84816b0c8 524 Gene3D G3DSA:3.90.226.10 273 524 8.1E-96 T 14-10-2018 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 145 208 6.4E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 Pfam PF00672 HAMP domain 90 139 5.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 327 345 9.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 320 9.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 365 9.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 306 9.7E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 256 366 9.1E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_01610 3af9de47fbb2595daf34a128f1676842 369 SMART SM00387 255 368 1.3E-38 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_01610 3af9de47fbb2595daf34a128f1676842 369 SUPERFAMILY SSF55874 198 365 1.83E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_01610 3af9de47fbb2595daf34a128f1676842 369 SUPERFAMILY SSF158472 90 140 3.14E-8 T 14-10-2018 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 Gene3D G3DSA:1.10.287.130 87 204 1.6E-21 T 14-10-2018 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 SUPERFAMILY SSF47384 128 209 1.49E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 Gene3D G3DSA:3.30.565.10 207 367 3.2E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_01610 3af9de47fbb2595daf34a128f1676842 369 SMART SM00304 90 143 3.9E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_01610 3af9de47fbb2595daf34a128f1676842 369 SMART SM00388 144 208 4.2E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 Gene3D G3DSA:3.40.710.10 227 465 3.2E-46 T 14-10-2018 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 Gene3D G3DSA:3.40.710.10 67 201 2.2E-11 T 14-10-2018 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 255 449 3.5E-36 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 103 244 1.0E-15 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 250 458 8.9E-47 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 289 311 2.1E-18 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 426 439 2.1E-18 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 346 360 2.1E-18 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 126 145 2.1E-18 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 361 375 2.1E-18 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 PACID_28520 08a017dc6c462f5ff218e1a67f2f57f4 472 SUPERFAMILY SSF56601 92 469 2.9E-53 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_05580 52bdfd8e44e7e5a39435e95f9640bd4c 407 Gene3D G3DSA:3.90.1150.10 11 379 2.1E-126 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_05580 52bdfd8e44e7e5a39435e95f9640bd4c 407 Pfam PF00266 Aminotransferase class-V 41 346 9.4E-26 T 14-10-2018 IPR000192 Aminotransferase class V domain PACID_05580 52bdfd8e44e7e5a39435e95f9640bd4c 407 Gene3D G3DSA:3.40.640.10 22 281 2.1E-126 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_05580 52bdfd8e44e7e5a39435e95f9640bd4c 407 PIRSF PIRSF000524 5 407 5.9E-98 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 PACID_05580 52bdfd8e44e7e5a39435e95f9640bd4c 407 SUPERFAMILY SSF53383 6 386 2.74E-83 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 SMART SM00487 302 504 1.5E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 Gene3D G3DSA:3.40.50.300 250 494 9.1E-74 T 14-10-2018 PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 SUPERFAMILY SSF50249 33 214 1.34E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 SUPERFAMILY SSF52540 222 497 6.02E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 Pfam PF00271 Helicase conserved C-terminal domain 527 648 6.0E-18 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 SUPERFAMILY SSF52540 327 704 1.89E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 SMART SM00490 564 649 1.7E-22 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 Gene3D G3DSA:3.40.50.300 503 690 3.0E-51 T 14-10-2018 PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 Pfam PF00270 DEAD/DEAH box helicase 329 479 2.0E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_21610 4020d4ac6a177b9c9d8889db475a94f2 758 Gene3D G3DSA:2.40.50.140 72 172 9.0E-11 T 14-10-2018 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 SUPERFAMILY SSF53850 277 502 7.91E-64 T 14-10-2018 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 544 726 2.7E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 SUPERFAMILY SSF53850 18 268 6.99E-63 T 14-10-2018 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 SMART SM00062 46 268 1.2E-54 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 SMART SM00062 283 504 1.4E-60 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 Gene3D G3DSA:3.40.190.10 368 462 6.3E-72 T 14-10-2018 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 285 502 1.8E-58 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 Gene3D G3DSA:1.10.3720.10 514 727 2.7E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 522 620 6.2E-29 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 Gene3D G3DSA:3.40.190.10 288 496 6.3E-72 T 14-10-2018 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 Gene3D G3DSA:3.40.190.10 50 264 3.2E-69 T 14-10-2018 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 SUPERFAMILY SSF161098 523 711 6.93E-48 T 14-10-2018 IPR035906 MetI-like superfamily PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 266 1.8E-57 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 Gene3D G3DSA:3.40.190.10 131 226 3.2E-69 T 14-10-2018 PACID_01070 7b6e63f1f649f182c8a45bbacfb8433a 727 SMART SM00079 46 267 1.7E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 PACID_19910 539f1e1ed289e7ac3facc0aa2f561872 270 Gene3D G3DSA:1.10.3720.10 56 268 2.1E-20 T 14-10-2018 IPR035906 MetI-like superfamily PACID_19910 539f1e1ed289e7ac3facc0aa2f561872 270 SUPERFAMILY SSF161098 60 248 7.06E-23 T 14-10-2018 IPR035906 MetI-like superfamily PACID_19910 539f1e1ed289e7ac3facc0aa2f561872 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 267 2.5E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 111 5.9E-41 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 SUPERFAMILY SSF89000 830 994 9.81E-40 T 14-10-2018 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Gene3D G3DSA:2.40.50.100 1055 1128 9.2E-16 T 14-10-2018 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Gene3D G3DSA:3.20.20.70 476 993 1.3E-220 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Pfam PF02785 Biotin carboxylase C-terminal domain 339 446 5.6E-31 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Pfam PF02436 Conserved carboxylase domain 825 1009 2.5E-51 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 3.9E-68 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Gene3D G3DSA:3.30.470.130 1 454 1.9E-177 T 14-10-2018 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 4 1129 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 SUPERFAMILY SSF51230 1053 1129 4.71E-15 T 14-10-2018 IPR011053 Single hybrid motif PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Gene3D G3DSA:3.10.600.10 459 1043 1.3E-220 T 14-10-2018 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Pfam PF00682 HMGL-like 529 800 1.7E-24 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 SUPERFAMILY SSF56059 84 351 1.2E-64 T 14-10-2018 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 PIRSF PIRSF001594 1 1129 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 Pfam PF00364 Biotin-requiring enzyme 1070 1128 4.2E-12 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 SUPERFAMILY SSF51246 334 452 4.08E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 SMART SM00878 339 446 5.2E-50 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 SUPERFAMILY SSF51569 524 815 5.86E-71 T 14-10-2018 PACID_00400 f441bc9354e0bd9f5b4a7aad98ad7ace 1129 SUPERFAMILY SSF52440 1 112 3.09E-41 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PACID_01760 4c288ab8bf23d1a35c9132f553008fe1 336 Gene3D G3DSA:3.30.70.920 60 146 7.0E-12 T 14-10-2018 PACID_01760 4c288ab8bf23d1a35c9132f553008fe1 336 SUPERFAMILY SSF46785 7 51 8.24E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_01760 4c288ab8bf23d1a35c9132f553008fe1 336 SMART SM00344 7 110 1.4E-5 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PACID_01760 4c288ab8bf23d1a35c9132f553008fe1 336 Gene3D G3DSA:1.10.10.10 7 53 7.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_01760 4c288ab8bf23d1a35c9132f553008fe1 336 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 1.6E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_01760 4c288ab8bf23d1a35c9132f553008fe1 336 Pfam PF01037 Lrp/AsnC ligand binding domain 70 140 2.0E-10 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PACID_01760 4c288ab8bf23d1a35c9132f553008fe1 336 SUPERFAMILY SSF54909 66 148 2.01E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_07320 421ca10a516c324dadf753bbc4924ba4 256 Gene3D G3DSA:3.40.50.1000 8 246 6.9E-84 T 14-10-2018 IPR023214 HAD superfamily PACID_07320 421ca10a516c324dadf753bbc4924ba4 256 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 8 228 2.0E-16 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PACID_07320 421ca10a516c324dadf753bbc4924ba4 256 SUPERFAMILY SSF56784 8 246 5.06E-30 T 14-10-2018 IPR036412 HAD-like superfamily PACID_07320 421ca10a516c324dadf753bbc4924ba4 256 Gene3D G3DSA:3.30.1240.20 96 188 6.9E-84 T 14-10-2018 PACID_07320 421ca10a516c324dadf753bbc4924ba4 256 Pfam PF03332 Eukaryotic phosphomannomutase 32 250 1.1E-7 T 14-10-2018 IPR005002 Phosphomannomutase GO:0004615|GO:0005737|GO:0009298 KEGG: 00051+5.4.2.8|KEGG: 00520+5.4.2.8|MetaCyc: PWY-5659|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 SUPERFAMILY SSF47384 278 359 4.32E-19 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 Pfam PF00672 HAMP domain 224 279 4.3E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 Gene3D G3DSA:3.30.565.10 362 526 1.3E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 SMART SM00304 221 283 4.2E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 SMART SM00388 291 358 7.4E-21 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 Gene3D G3DSA:1.10.287.130 225 360 4.6E-26 T 14-10-2018 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 SMART SM00387 401 526 3.1E-34 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 1.4E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 492 8.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 438 452 8.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 466 8.2E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 402 525 1.3E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_01570 81ceb2b1a8a198834ee65dbbdf8450fa 526 SUPERFAMILY SSF55874 347 525 1.57E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 14-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 Gene3D G3DSA:3.30.70.120 1 112 4.6E-39 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 SUPERFAMILY SSF54913 1 112 7.31E-37 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 4.2E-34 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 14-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 PRINTS PR00340 P-II protein signature 2 17 3.9E-27 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 PRINTS PR00340 P-II protein signature 83 103 3.9E-27 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 PRINTS PR00340 P-II protein signature 23 41 3.9E-27 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 PRINTS PR00340 P-II protein signature 52 75 3.9E-27 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PACID_28600 194786fdae53ebcab79f9bcd888e1de9 112 SMART SM00938 4 105 8.1E-48 T 14-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 PACID_01900 d8a9ac5225a5706fbe81d53bfadb3cee 383 Gene3D G3DSA:3.40.250.10 262 376 3.8E-10 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PACID_01900 d8a9ac5225a5706fbe81d53bfadb3cee 383 Gene3D G3DSA:3.40.50.720 11 257 4.9E-78 T 14-10-2018 PACID_01900 d8a9ac5225a5706fbe81d53bfadb3cee 383 SUPERFAMILY SSF69572 6 353 4.32E-84 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 PACID_01900 d8a9ac5225a5706fbe81d53bfadb3cee 383 Pfam PF00899 ThiF family 19 246 2.9E-59 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PACID_01900 d8a9ac5225a5706fbe81d53bfadb3cee 383 SMART SM00450 276 383 6.1E-5 T 14-10-2018 IPR001763 Rhodanese-like domain PACID_05530 6c9a8b568af349a7a1c0a86cab0d0188 561 Pfam PF02629 CoA binding domain 191 283 2.6E-9 T 14-10-2018 IPR003781 CoA-binding GO:0048037 PACID_05530 6c9a8b568af349a7a1c0a86cab0d0188 561 SUPERFAMILY SSF52210 183 312 3.14E-16 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_05530 6c9a8b568af349a7a1c0a86cab0d0188 561 SUPERFAMILY SSF52210 346 493 3.21E-5 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_05530 6c9a8b568af349a7a1c0a86cab0d0188 561 Pfam PF00549 CoA-ligase 330 487 8.1E-44 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_05530 6c9a8b568af349a7a1c0a86cab0d0188 561 Gene3D G3DSA:3.40.50.261 326 492 1.1E-165 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_05530 6c9a8b568af349a7a1c0a86cab0d0188 561 Gene3D G3DSA:3.40.50.720 103 558 1.1E-165 T 14-10-2018 PACID_05530 6c9a8b568af349a7a1c0a86cab0d0188 561 Gene3D G3DSA:3.40.50.261 189 325 1.1E-165 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_14380 51814292c50e2d81c51a9707005eb272 585 Gene3D G3DSA:3.20.20.70 21 396 2.8E-151 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_14380 51814292c50e2d81c51a9707005eb272 585 Hamap MF_00572 2-isopropylmalate synthase [leuA]. 17 574 51.934 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_14380 51814292c50e2d81c51a9707005eb272 585 Pfam PF08502 LeuA allosteric (dimerisation) domain 442 572 4.3E-31 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_14380 51814292c50e2d81c51a9707005eb272 585 SMART SM00917 442 573 1.8E-37 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_14380 51814292c50e2d81c51a9707005eb272 585 SUPERFAMILY SSF110921 464 571 1.57E-35 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_14380 51814292c50e2d81c51a9707005eb272 585 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 49 65 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_14380 51814292c50e2d81c51a9707005eb272 585 Gene3D G3DSA:3.30.160.270 460 573 3.3E-36 T 14-10-2018 PACID_14380 51814292c50e2d81c51a9707005eb272 585 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 253 266 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_14380 51814292c50e2d81c51a9707005eb272 585 SUPERFAMILY SSF89000 408 458 1.73E-14 T 14-10-2018 PACID_14380 51814292c50e2d81c51a9707005eb272 585 Pfam PF00682 HMGL-like 42 323 6.4E-70 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PACID_14380 51814292c50e2d81c51a9707005eb272 585 TIGRFAM TIGR00970 leuA_yeast: 2-isopropylmalate synthase 16 572 7.7E-248 T 14-10-2018 IPR005668 2-isopropylmalate synthase GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_14380 51814292c50e2d81c51a9707005eb272 585 Gene3D G3DSA:1.10.1220.20 405 458 4.5E-23 T 14-10-2018 PACID_14380 51814292c50e2d81c51a9707005eb272 585 SUPERFAMILY SSF51569 31 340 9.77E-96 T 14-10-2018 PACID_26500 f413ae51a42cc562d50a0a2b5f205529 608 TIGRFAM TIGR03491 TIGR03491: putative RecB family nuclease, TM0106 family 288 602 2.5E-34 T 14-10-2018 IPR019993 RecB family nuclease, TM0106, putative PACID_26500 f413ae51a42cc562d50a0a2b5f205529 608 SUPERFAMILY SSF53098 405 603 1.14E-5 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_26500 f413ae51a42cc562d50a0a2b5f205529 608 Pfam PF13482 RNase_H superfamily 455 602 1.2E-11 T 14-10-2018 IPR038720 YprB, ribonuclease H-like domain PACID_27880 71a8d511ca6104d654d693788af5fdd2 627 Pfam PF00999 Sodium/hydrogen exchanger family 6 451 1.4E-49 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 2.6E-36 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SUPERFAMILY SSF52440 1 127 2.59E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Gene3D G3DSA:3.40.50.20 547 655 1.4E-44 T 14-10-2018 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Gene3D G3DSA:3.30.470.20 659 928 2.5E-101 T 14-10-2018 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Pfam PF02142 MGS-like domain 950 1040 5.0E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 5.0E-74 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 867 1.0E-32 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SMART SM01209 672 833 0.0056 T 14-10-2018 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SUPERFAMILY SSF56059 128 399 1.47E-105 T 14-10-2018 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SMART SM00851 949 1040 2.0E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1061 12.85 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 5.7E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 5.7E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 5.7E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 5.7E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 5.7E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 5.7E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 5.7E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SUPERFAMILY SSF52335 930 1051 2.35E-26 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SMART SM01096 420 540 7.5E-63 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Gene3D G3DSA:1.10.1030.10 402 546 2.6E-40 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SUPERFAMILY SSF52440 550 668 1.15E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SUPERFAMILY SSF56059 666 925 9.02E-94 T 14-10-2018 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Gene3D G3DSA:3.40.50.20 1 116 9.1E-47 T 14-10-2018 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Gene3D G3DSA:3.30.470.20 120 401 7.3E-122 T 14-10-2018 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1060 13.287 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1051 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 Gene3D G3DSA:3.40.50.1380 931 1061 9.0E-31 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily PACID_15090 868fe9bb535a4287bf4620448a3c0d31 1062 SUPERFAMILY SSF48108 395 547 6.8E-48 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_30000 b0cc0b4c6147e6cadf1ffd6ef1e6d837 779 Gene3D G3DSA:2.60.120.260 608 766 1.9E-7 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_30000 b0cc0b4c6147e6cadf1ffd6ef1e6d837 779 Pfam PF12831 FAD dependent oxidoreductase 18 426 1.9E-92 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal PACID_30000 b0cc0b4c6147e6cadf1ffd6ef1e6d837 779 Gene3D G3DSA:3.50.50.60 5 80 1.9E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_30000 b0cc0b4c6147e6cadf1ffd6ef1e6d837 779 SUPERFAMILY SSF51905 13 403 2.42E-20 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_12460 5b7aad158462fe90555cfcb110655d39 448 Pfam PF01474 Class-II DAHP synthetase family 2 424 2.7E-194 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PACID_12460 5b7aad158462fe90555cfcb110655d39 448 SUPERFAMILY SSF51569 1 427 2.93E-188 T 14-10-2018 PACID_12460 5b7aad158462fe90555cfcb110655d39 448 TIGRFAM TIGR01358 DAHP_synth_II: 3-deoxy-7-phosphoheptulonate synthase 2 429 3.6E-209 T 14-10-2018 IPR002480 DAHP synthetase, class II GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 Pfam PF00155 Aminotransferase class I and II 117 459 3.3E-21 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 SUPERFAMILY SSF53383 114 463 2.89E-69 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 Pfam PF00392 Bacterial regulatory proteins, gntR family 34 94 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 Gene3D G3DSA:3.40.640.10 147 366 7.7E-67 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 68 3.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 68 84 3.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 SMART SM00345 35 94 7.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 SUPERFAMILY SSF46785 31 98 1.09E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 Gene3D G3DSA:3.90.1150.10 116 463 7.7E-67 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_04150 42ca06c4407cde56533eb051f9a4bb9e 466 Gene3D G3DSA:1.10.10.10 31 115 3.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_22060 68181035345b90a5becb0365517d6ba0 270 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 269 2.3E-72 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PACID_22060 68181035345b90a5becb0365517d6ba0 270 SUPERFAMILY SSF46934 1 54 1.36E-16 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 PACID_22060 68181035345b90a5becb0365517d6ba0 270 Gene3D G3DSA:1.10.286.20 189 235 3.0E-37 T 14-10-2018 PACID_22060 68181035345b90a5becb0365517d6ba0 270 Pfam PF00889 Elongation factor TS 67 269 3.1E-57 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 PACID_22060 68181035345b90a5becb0365517d6ba0 270 SUPERFAMILY SSF54713 59 141 3.76E-13 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PACID_22060 68181035345b90a5becb0365517d6ba0 270 Gene3D G3DSA:3.30.479.20 56 143 2.9E-13 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PACID_22060 68181035345b90a5becb0365517d6ba0 270 Hamap MF_00050 Elongation factor Ts [tsf]. 1 270 61.741 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PACID_22060 68181035345b90a5becb0365517d6ba0 270 Gene3D G3DSA:1.10.8.10 1 54 4.6E-23 T 14-10-2018 PACID_22060 68181035345b90a5becb0365517d6ba0 270 Gene3D G3DSA:3.30.479.20 158 269 3.0E-37 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PACID_22060 68181035345b90a5becb0365517d6ba0 270 SUPERFAMILY SSF54713 145 270 9.42E-38 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 PACID_22060 68181035345b90a5becb0365517d6ba0 270 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 SMART SM00388 107 173 5.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 SMART SM00387 220 330 3.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 314 327 8.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 275 285 8.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 257 271 8.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 308 8.7E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 SUPERFAMILY SSF55874 184 327 3.01E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 Gene3D G3DSA:1.10.287.130 91 174 4.5E-13 T 14-10-2018 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 Pfam PF00512 His Kinase A (phospho-acceptor) domain 108 173 1.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 SUPERFAMILY SSF47384 93 174 1.94E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 Gene3D G3DSA:3.30.565.10 180 329 9.5E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_31530 fe1245dbf75a729a110c36ef7138e97c 330 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 224 328 4.5E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_21190 ab5c26fbbfbf820bd0cb58293150e834 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 285 2.0E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_21190 ab5c26fbbfbf820bd0cb58293150e834 299 Gene3D G3DSA:1.10.3720.10 23 286 1.6E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_21190 ab5c26fbbfbf820bd0cb58293150e834 299 SUPERFAMILY SSF161098 28 299 7.59E-64 T 14-10-2018 IPR035906 MetI-like superfamily PACID_26080 1f3ec234609e140c1b929f897615d991 164 SUPERFAMILY SSF89963 92 164 2.88E-22 T 14-10-2018 IPR036183 YajQ-like superfamily PACID_26080 1f3ec234609e140c1b929f897615d991 164 Gene3D G3DSA:3.30.70.860 6 164 4.8E-58 T 14-10-2018 IPR035571 UPF0234-like, C-terminal PACID_26080 1f3ec234609e140c1b929f897615d991 164 SUPERFAMILY SSF89963 6 89 2.88E-26 T 14-10-2018 IPR036183 YajQ-like superfamily PACID_26080 1f3ec234609e140c1b929f897615d991 164 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 164 24.664 T 14-10-2018 IPR007551 Protein of unknown function DUF520 PACID_26080 1f3ec234609e140c1b929f897615d991 164 Gene3D G3DSA:3.30.70.990 12 101 4.8E-58 T 14-10-2018 IPR035570 UPF0234, N-terminal PACID_26080 1f3ec234609e140c1b929f897615d991 164 Pfam PF04461 Protein of unknown function (DUF520) 5 164 1.1E-58 T 14-10-2018 IPR007551 Protein of unknown function DUF520 PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 Gene3D G3DSA:3.30.420.40 6 325 1.8E-112 T 14-10-2018 PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 7 20 2.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 133 145 2.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 99 118 2.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 2.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 78 98 2.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 273 282 2.6E-49 T 14-10-2018 IPR017861 Kae1/TsaD family PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 Gene3D G3DSA:3.30.420.40 131 303 1.8E-112 T 14-10-2018 PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 6 323 8.1E-125 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 4 342 60.892 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 Pfam PF00814 Glycoprotease family 25 316 1.3E-89 T 14-10-2018 IPR000905 Gcp-like domain PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 7 316 2.2E-97 T 14-10-2018 IPR017861 Kae1/TsaD family PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 SUPERFAMILY SSF53067 5 318 3.45E-37 T 14-10-2018 PACID_25020 699538a4f3af638c6ffa784d341af8a9 347 ProSitePatterns PS01016 Glycoprotease family signature. 98 118 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 PACID_15960 0199a7397f351d26c18afd501be5e750 473 PIRSF PIRSF006809 46 471 3.8E-150 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 PACID_15960 0199a7397f351d26c18afd501be5e750 473 SUPERFAMILY SSF52540 252 438 2.64E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_15960 0199a7397f351d26c18afd501be5e750 473 Gene3D G3DSA:3.40.50.11060 63 185 1.7E-38 T 14-10-2018 PACID_15960 0199a7397f351d26c18afd501be5e750 473 Pfam PF16360 GTP-binding GTPase Middle Region 160 245 1.0E-26 T 14-10-2018 IPR032305 GTP-binding protein, middle domain PACID_15960 0199a7397f351d26c18afd501be5e750 473 Pfam PF13167 GTP-binding GTPase N-terminal 71 158 1.6E-31 T 14-10-2018 IPR025121 GTPase HflX, N-terminal PACID_15960 0199a7397f351d26c18afd501be5e750 473 Gene3D G3DSA:3.40.50.300 250 413 2.0E-39 T 14-10-2018 PACID_15960 0199a7397f351d26c18afd501be5e750 473 Pfam PF01926 50S ribosome-binding GTPase 253 371 6.2E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_15960 0199a7397f351d26c18afd501be5e750 473 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 54 411 4.3E-131 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 PACID_15960 0199a7397f351d26c18afd501be5e750 473 Hamap MF_00900 GTPase HflX [hflX]. 73 441 46.944 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 PACID_15960 0199a7397f351d26c18afd501be5e750 473 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 320 338 1.1E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_15960 0199a7397f351d26c18afd501be5e750 473 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 253 273 1.1E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_12570 137ae7802826693f9ac33d04e2fd9bb4 382 Gene3D G3DSA:3.40.190.10 167 271 1.2E-32 T 14-10-2018 PACID_12570 137ae7802826693f9ac33d04e2fd9bb4 382 Gene3D G3DSA:3.40.190.10 96 333 1.2E-32 T 14-10-2018 PACID_12570 137ae7802826693f9ac33d04e2fd9bb4 382 SUPERFAMILY SSF53850 91 312 1.42E-28 T 14-10-2018 PACID_12570 137ae7802826693f9ac33d04e2fd9bb4 382 Pfam PF13379 NMT1-like family 96 310 1.8E-15 T 14-10-2018 PACID_18240 6022795b608bcd6d9c80509e494e9018 423 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 21 405 3.6E-180 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PACID_18240 6022795b608bcd6d9c80509e494e9018 423 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 67 391 2.5E-44 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PACID_18240 6022795b608bcd6d9c80509e494e9018 423 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 95 109 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PACID_18240 6022795b608bcd6d9c80509e494e9018 423 Gene3D G3DSA:3.40.50.1100 25 220 7.3E-176 T 14-10-2018 PACID_18240 6022795b608bcd6d9c80509e494e9018 423 PIRSF PIRSF001413 2 412 7.9E-156 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PACID_18240 6022795b608bcd6d9c80509e494e9018 423 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 16 409 49.93 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PACID_18240 6022795b608bcd6d9c80509e494e9018 423 SUPERFAMILY SSF53686 17 408 3.67E-138 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PACID_18240 6022795b608bcd6d9c80509e494e9018 423 Gene3D G3DSA:3.40.50.1100 68 402 7.3E-176 T 14-10-2018 PACID_23890 2dd397f92d65a652c558bac28a9c5397 75 Pfam PF04023 FeoA domain 2 64 6.6E-9 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PACID_23890 2dd397f92d65a652c558bac28a9c5397 75 Gene3D G3DSA:2.30.30.90 9 67 1.9E-10 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain PACID_23890 2dd397f92d65a652c558bac28a9c5397 75 SUPERFAMILY SSF50037 1 65 4.27E-8 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal PACID_34010 02a5bd6db94c809d07811239be51269b 301 SUPERFAMILY SSF46785 26 119 3.46E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_34010 02a5bd6db94c809d07811239be51269b 301 SUPERFAMILY SSF53850 101 299 2.9E-35 T 14-10-2018 PACID_34010 02a5bd6db94c809d07811239be51269b 301 Gene3D G3DSA:3.40.190.10 101 283 1.2E-28 T 14-10-2018 PACID_34010 02a5bd6db94c809d07811239be51269b 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 71 3.1E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_34010 02a5bd6db94c809d07811239be51269b 301 Gene3D G3DSA:1.10.10.10 10 98 1.8E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_34010 02a5bd6db94c809d07811239be51269b 301 Pfam PF03466 LysR substrate binding domain 97 297 1.9E-38 T 14-10-2018 IPR005119 LysR, substrate-binding PACID_34010 02a5bd6db94c809d07811239be51269b 301 Gene3D G3DSA:3.40.190.10 173 274 1.2E-28 T 14-10-2018 PACID_27970 e9b3332c8c3216d4a43f0d8cbad8bbcd 191 Pfam PF00578 AhpC/TSA family 51 165 2.8E-15 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PACID_27970 e9b3332c8c3216d4a43f0d8cbad8bbcd 191 SUPERFAMILY SSF52833 7 185 2.06E-30 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_27970 e9b3332c8c3216d4a43f0d8cbad8bbcd 191 Gene3D G3DSA:3.40.30.10 44 190 7.9E-35 T 14-10-2018 PACID_27970 e9b3332c8c3216d4a43f0d8cbad8bbcd 191 ProSitePatterns PS00194 Thioredoxin family active site. 77 95 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 SUPERFAMILY SSF54991 742 838 3.4E-26 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 832 38.337 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Gene3D G3DSA:3.30.930.10 506 734 3.7E-55 T 14-10-2018 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Gene3D G3DSA:3.50.40.10 222 416 7.2E-66 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 SUPERFAMILY SSF56037 231 420 4.97E-59 T 14-10-2018 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Pfam PF01588 Putative tRNA binding domain 48 160 1.1E-9 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 SMART SM00896 745 838 1.5E-40 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 838 1.8E-167 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 SMART SM00873 235 408 1.3E-70 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Gene3D G3DSA:2.40.50.140 41 178 7.8E-53 T 14-10-2018 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 SUPERFAMILY SSF50249 47 212 8.28E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Gene3D G3DSA:3.30.56.10 425 495 1.4E-11 T 14-10-2018 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Pfam PF03147 Ferredoxin-fold anticodon binding domain 745 838 1.2E-24 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 SUPERFAMILY SSF46955 426 495 7.42E-12 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 SMART SM00874 423 491 3.3E-11 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Gene3D G3DSA:3.30.56.10 7 204 7.8E-53 T 14-10-2018 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Gene3D G3DSA:3.30.70.380 746 839 4.1E-26 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 SUPERFAMILY SSF55681 487 732 3.58E-40 T 14-10-2018 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Pfam PF03484 tRNA synthetase B5 domain 434 491 1.5E-10 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PACID_10230 681e3e0da6ee88991ff8c4a4315d7f6d 839 Pfam PF03483 B3/4 domain 235 407 3.0E-56 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 Pfam PF04408 Helicase associated domain (HA2) 420 536 3.0E-15 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 Gene3D G3DSA:3.40.50.300 197 374 2.5E-54 T 14-10-2018 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 Gene3D G3DSA:3.40.50.300 16 196 3.7E-73 T 14-10-2018 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 SMART SM00847 417 510 1.1E-26 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 SMART SM00490 257 357 1.3E-13 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 SUPERFAMILY SSF52540 25 502 2.16E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 604 689 1.6E-14 T 14-10-2018 IPR011709 Domain of unknown function DUF1605 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 17 501 1.0E-252 T 14-10-2018 IPR010222 RNA helicase HrpA GO:0004004 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 Gene3D G3DSA:1.20.120.1080 401 504 1.9E-14 T 14-10-2018 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 Pfam PF00271 Helicase conserved C-terminal domain 240 356 2.1E-9 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 Pfam PF00270 DEAD/DEAH box helicase 31 177 4.3E-7 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 SMART SM00487 22 203 1.5E-29 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 SMART SM00382 39 337 0.0022 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_16060 ed2a71d272cd50b6614c27f16edd1fbe 1302 Pfam PF11898 Domain of unknown function (DUF3418) 704 1299 2.5E-187 T 14-10-2018 IPR024590 RNA helicase HrpA, C-terminal PACID_02480 d9372ecbdeabd6c01471f1a35da4e3ac 478 Pfam PF13410 Glutathione S-transferase, C-terminal domain 357 429 2.2E-8 T 14-10-2018 PACID_02480 d9372ecbdeabd6c01471f1a35da4e3ac 478 SUPERFAMILY SSF55729 43 178 1.89E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_02480 d9372ecbdeabd6c01471f1a35da4e3ac 478 Gene3D G3DSA:1.20.1050.10 322 431 4.2E-23 T 14-10-2018 PACID_02480 d9372ecbdeabd6c01471f1a35da4e3ac 478 Gene3D G3DSA:3.40.30.130 289 321 4.2E-23 T 14-10-2018 PACID_02480 d9372ecbdeabd6c01471f1a35da4e3ac 478 Gene3D G3DSA:3.40.630.30 39 183 1.3E-13 T 14-10-2018 PACID_02480 d9372ecbdeabd6c01471f1a35da4e3ac 478 SUPERFAMILY SSF47616 329 432 1.53E-14 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PACID_02480 d9372ecbdeabd6c01471f1a35da4e3ac 478 Pfam PF00583 Acetyltransferase (GNAT) family 68 170 3.9E-6 T 14-10-2018 IPR000182 GNAT domain PACID_07330 16925d56dd03376f325d543442f0c36e 305 Gene3D G3DSA:1.10.3720.10 64 303 1.5E-61 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07330 16925d56dd03376f325d543442f0c36e 305 SUPERFAMILY SSF161098 68 293 8.63E-54 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07330 16925d56dd03376f325d543442f0c36e 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 303 2.9E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 168 322 2.4E-23 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 60 67 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 Gene3D G3DSA:3.40.50.1370 16 321 1.6E-92 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 143 160 9.2E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 50 72 9.2E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 89 98 9.2E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 306 320 9.2E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00101 Aspartate carbamoyltransferase signature 239 248 9.2E-30 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 SUPERFAMILY SSF53671 14 326 4.32E-80 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 144 155 7.3E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 275 284 7.3E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 290 313 7.3E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 60 79 7.3E-20 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 Gene3D G3DSA:3.40.50.1370 144 312 1.6E-92 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 15 156 3.7E-42 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PACID_33560 5b2cb88c32057908a34f30cae76ab093 348 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 15 324 1.0E-82 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_18160 1e94b75318502096171a8c772d848bfe 316 Gene3D G3DSA:1.10.3720.10 48 294 1.1E-59 T 14-10-2018 IPR035906 MetI-like superfamily PACID_18160 1e94b75318502096171a8c772d848bfe 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 289 5.2E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_18160 1e94b75318502096171a8c772d848bfe 316 SUPERFAMILY SSF161098 51 281 6.15E-53 T 14-10-2018 IPR035906 MetI-like superfamily PACID_24990 1039a188d40625547d97b4dd17a1dc14 195 Pfam PF01871 AMMECR1 24 191 8.5E-45 T 14-10-2018 IPR002733 AMMECR1 domain PACID_24990 1039a188d40625547d97b4dd17a1dc14 195 Gene3D G3DSA:3.30.1490.150 120 192 2.3E-49 T 14-10-2018 PACID_24990 1039a188d40625547d97b4dd17a1dc14 195 Gene3D G3DSA:3.30.700.20 19 194 2.3E-49 T 14-10-2018 IPR027485 AMMECR1, N-terminal PACID_24990 1039a188d40625547d97b4dd17a1dc14 195 TIGRFAM TIGR00296 TIGR00296: uncharacterized protein, PH0010 family 15 194 3.1E-32 T 14-10-2018 IPR023473 AMMECR1 PACID_24990 1039a188d40625547d97b4dd17a1dc14 195 TIGRFAM TIGR04335 AmmeMemoSam_A: AmmeMemoRadiSam system protein A 21 192 2.5E-56 T 14-10-2018 IPR027623 AmmeMemoRadiSam system protein A PACID_24990 1039a188d40625547d97b4dd17a1dc14 195 SUPERFAMILY SSF143447 12 194 5.76E-54 T 14-10-2018 IPR036071 AMMECR1 domain superfamily PACID_21480 dbde0af00a8bbcae3a5c23b064ac2ef6 303 SMART SM00530 6 84 1.8E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_21480 dbde0af00a8bbcae3a5c23b064ac2ef6 303 SUPERFAMILY SSF47413 33 83 3.41E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_21480 dbde0af00a8bbcae3a5c23b064ac2ef6 303 Gene3D G3DSA:3.30.450.180 110 285 1.4E-10 T 14-10-2018 PACID_21480 dbde0af00a8bbcae3a5c23b064ac2ef6 303 Pfam PF13560 Helix-turn-helix domain 9 87 8.0E-15 T 14-10-2018 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 SMART SM00838 413 501 0.003 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PACID_13840 0e828349571c9847e27d3345a644fa5c 617 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 22 191 7.4E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 TIGRFAM TIGR01393 lepA: elongation factor 4 19 610 7.2E-292 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Gene3D G3DSA:2.40.30.10 202 300 2.1E-33 T 14-10-2018 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Hamap MF_00071 Elongation factor 4 [lepA]. 1 613 284.849 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 SUPERFAMILY SSF52540 15 237 2.6E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Pfam PF00679 Elongation factor G C-terminus 414 499 2.1E-20 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Gene3D G3DSA:3.40.50.300 16 200 5.4E-71 T 14-10-2018 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Pfam PF03144 Elongation factor Tu domain 2 220 290 7.8E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Gene3D G3DSA:3.30.70.870 301 382 5.2E-35 T 14-10-2018 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 SUPERFAMILY SSF54980 306 385 1.26E-18 T 14-10-2018 IPR035647 EF-G domain III/V-like PACID_13840 0e828349571c9847e27d3345a644fa5c 617 SUPERFAMILY SSF54980 414 509 1.68E-22 T 14-10-2018 IPR035647 EF-G domain III/V-like PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Gene3D G3DSA:3.30.70.3380 383 493 7.5E-41 T 14-10-2018 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Pfam PF00009 Elongation factor Tu GTP binding domain 20 196 4.9E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Gene3D G3DSA:3.30.70.2570 495 569 3.5E-34 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily PACID_13840 0e828349571c9847e27d3345a644fa5c 617 Pfam PF06421 GTP-binding protein LepA C-terminus 503 608 1.2E-48 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal PACID_13840 0e828349571c9847e27d3345a644fa5c 617 PRINTS PR00315 GTP-binding elongation factor signature 65 73 1.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 PRINTS PR00315 GTP-binding elongation factor signature 22 35 1.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 PRINTS PR00315 GTP-binding elongation factor signature 105 116 1.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 PRINTS PR00315 GTP-binding elongation factor signature 89 99 1.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 PRINTS PR00315 GTP-binding elongation factor signature 141 150 1.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_13840 0e828349571c9847e27d3345a644fa5c 617 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PACID_12030 54b087de2c372bc44990d042189ad2b8 144 Pfam PF06271 RDD family 27 120 1.5E-7 T 14-10-2018 IPR010432 RDD PACID_12030 54b087de2c372bc44990d042189ad2b8 144 PIRSF PIRSF021697 1 143 6.4E-47 T 14-10-2018 IPR016795 Uncharacterised conserved protein UCP021697, membrane PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 Gene3D G3DSA:3.40.50.300 10 466 1.4E-150 T 14-10-2018 PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 SUPERFAMILY SSF52540 10 456 6.03E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 Gene3D G3DSA:1.20.1580.10 96 365 1.4E-150 T 14-10-2018 PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 Gene3D G3DSA:1.20.1580.10 572 610 4.6E-97 T 14-10-2018 PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 Gene3D G3DSA:3.40.50.300 491 777 4.6E-97 T 14-10-2018 PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 Gene3D G3DSA:1.10.8.280 177 287 1.4E-150 T 14-10-2018 PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 SMART SM00382 28 442 4.4 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 SMART SM00382 505 750 0.086 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 SUPERFAMILY SSF52540 488 757 4.53E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23650 8da512fabbfa244900fb9c8ed1b93f9c 787 Pfam PF00005 ABC transporter 496 703 6.4E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 Pfam PF00072 Response regulator receiver domain 3 111 1.7E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 1.0E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 SUPERFAMILY SSF46894 145 214 1.56E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 Gene3D G3DSA:3.40.50.12740 1 213 1.2E-68 T 14-10-2018 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 SMART SM00448 1 113 4.2E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 6.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 6.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 6.3E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 SUPERFAMILY SSF52172 1 131 6.26E-33 T 14-10-2018 IPR011006 CheY-like superfamily PACID_14200 2307dd7140a3b093c440d2d97bc3f430 218 SMART SM00421 150 207 3.0E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 Pfam PF00701 Dihydrodipicolinate synthetase family 6 289 1.0E-77 T 14-10-2018 IPR002220 DapA-like GO:0016829 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 Gene3D G3DSA:3.20.20.70 2 293 8.5E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 5.8E-29 T 14-10-2018 IPR002220 DapA-like GO:0016829 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 5.8E-29 T 14-10-2018 IPR002220 DapA-like GO:0016829 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 5.8E-29 T 14-10-2018 IPR002220 DapA-like GO:0016829 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 5.8E-29 T 14-10-2018 IPR002220 DapA-like GO:0016829 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 5 290 53.732 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 PIRSF PIRSF001365 3 293 2.5E-75 T 14-10-2018 IPR002220 DapA-like GO:0016829 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 SUPERFAMILY SSF51569 4 292 3.77E-86 T 14-10-2018 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 SMART SM01130 5 292 3.9E-107 T 14-10-2018 IPR002220 DapA-like GO:0016829 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 14-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_11740 524c66e8cfde01d4c6110a7f03e1121a 293 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 9 286 2.8E-76 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_20920 9404adc8530681870420fff33cb843f0 235 Gene3D G3DSA:1.25.40.10 29 218 4.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_20920 9404adc8530681870420fff33cb843f0 235 SUPERFAMILY SSF48452 44 199 6.45E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 Pfam PF00925 GTP cyclohydrolase II 219 381 5.1E-57 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 PIRSF PIRSF001259 2 416 1.1E-133 T 14-10-2018 PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 SUPERFAMILY SSF55821 4 203 8.24E-73 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 212 409 35.467 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 SUPERFAMILY SSF142695 214 382 1.7E-50 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 198 7.1E-74 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 Gene3D G3DSA:3.90.870.10 1 207 1.8E-80 T 14-10-2018 PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 4 199 4.7E-63 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24650 bad463ee7f65ebc392e70d386f8601c7 435 Gene3D G3DSA:3.40.50.10990 213 386 1.7E-60 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 PACID_04320 b4f9af91c0e0c433d6e6235d24ade29b 259 SUPERFAMILY SSF56784 2 254 3.76E-53 T 14-10-2018 IPR036412 HAD-like superfamily PACID_04320 b4f9af91c0e0c433d6e6235d24ade29b 259 Gene3D G3DSA:3.30.1240.10 79 179 3.6E-52 T 14-10-2018 PACID_04320 b4f9af91c0e0c433d6e6235d24ade29b 259 Pfam PF08282 haloacid dehalogenase-like hydrolase 2 250 9.0E-45 T 14-10-2018 PACID_04320 b4f9af91c0e0c433d6e6235d24ade29b 259 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 1 223 6.4E-18 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PACID_04320 b4f9af91c0e0c433d6e6235d24ade29b 259 Gene3D G3DSA:3.40.50.1000 2 251 3.6E-52 T 14-10-2018 IPR023214 HAD superfamily PACID_04320 b4f9af91c0e0c433d6e6235d24ade29b 259 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 2 250 2.2E-44 T 14-10-2018 IPR000150 Cof family GO:0016787 PACID_21030 933df106ac16b0528508812f4b9b646b 431 PIRSF PIRSF001369 41 431 2.9E-129 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type PACID_21030 933df106ac16b0528508812f4b9b646b 431 Pfam PF00285 Citrate synthase, C-terminal domain 52 413 5.5E-119 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_21030 933df106ac16b0528508812f4b9b646b 431 Gene3D G3DSA:1.10.580.10 61 413 2.5E-121 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PACID_21030 933df106ac16b0528508812f4b9b646b 431 ProSitePatterns PS00480 Citrate synthase signature. 305 317 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PACID_21030 933df106ac16b0528508812f4b9b646b 431 PRINTS PR00143 Citrate synthase signature 244 272 4.0E-45 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_21030 933df106ac16b0528508812f4b9b646b 431 PRINTS PR00143 Citrate synthase signature 222 237 4.0E-45 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_21030 933df106ac16b0528508812f4b9b646b 431 PRINTS PR00143 Citrate synthase signature 361 377 4.0E-45 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_21030 933df106ac16b0528508812f4b9b646b 431 PRINTS PR00143 Citrate synthase signature 168 181 4.0E-45 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_21030 933df106ac16b0528508812f4b9b646b 431 PRINTS PR00143 Citrate synthase signature 381 395 4.0E-45 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_21030 933df106ac16b0528508812f4b9b646b 431 PRINTS PR00143 Citrate synthase signature 298 318 4.0E-45 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_21030 933df106ac16b0528508812f4b9b646b 431 SUPERFAMILY SSF48256 6 430 1.83E-136 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 PACID_21030 933df106ac16b0528508812f4b9b646b 431 Gene3D G3DSA:1.10.230.10 271 378 2.5E-121 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain PACID_21030 933df106ac16b0528508812f4b9b646b 431 Gene3D G3DSA:2.20.28.60 5 54 8.3E-15 T 14-10-2018 PACID_30810 02c5096dea55c16d6dda82f402a66442 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 15 57 7.4E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_30810 02c5096dea55c16d6dda82f402a66442 350 SMART SM00354 10 80 1.5E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_30810 02c5096dea55c16d6dda82f402a66442 350 Gene3D G3DSA:3.40.50.2300 173 298 1.9E-64 T 14-10-2018 PACID_30810 02c5096dea55c16d6dda82f402a66442 350 SUPERFAMILY SSF53822 70 320 3.99E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_30810 02c5096dea55c16d6dda82f402a66442 350 SUPERFAMILY SSF47413 12 67 3.6E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_30810 02c5096dea55c16d6dda82f402a66442 350 Pfam PF13377 Periplasmic binding protein-like domain 181 340 2.8E-36 T 14-10-2018 PACID_30810 02c5096dea55c16d6dda82f402a66442 350 Gene3D G3DSA:1.10.260.40 10 64 2.6E-21 T 14-10-2018 PACID_30810 02c5096dea55c16d6dda82f402a66442 350 Gene3D G3DSA:3.40.50.2300 65 313 1.9E-64 T 14-10-2018 PACID_20730 e3918915a15d49ded60d323cb26941a6 79 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 12 75 15.622 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 PACID_20730 e3918915a15d49ded60d323cb26941a6 79 Pfam PF02416 mttA/Hcf106 family 14 61 1.2E-14 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PACID_16640 5a2fe662564d0a651f717f467bbc27ae 153 Gene3D G3DSA:3.10.690.10 1 138 3.2E-34 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 PACID_16640 5a2fe662564d0a651f717f467bbc27ae 153 SUPERFAMILY SSF103256 1 135 1.83E-32 T 14-10-2018 IPR036104 Bifunctional nuclease superfamily GO:0004518 PACID_16640 5a2fe662564d0a651f717f467bbc27ae 153 Pfam PF02577 Bifunctional nuclease 5 127 2.0E-33 T 14-10-2018 IPR003729 Bifunctional nuclease domain GO:0004518 PACID_12760 26e75fae5a0b625b0c0bc138301c9bad 160 SUPERFAMILY SSF89447 18 154 3.31E-44 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily PACID_12760 26e75fae5a0b625b0c0bc138301c9bad 160 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 160 45.996 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PACID_12760 26e75fae5a0b625b0c0bc138301c9bad 160 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 20 155 1.7E-36 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PACID_12760 26e75fae5a0b625b0c0bc138301c9bad 160 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 19 141 7.0E-62 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 PACID_12760 26e75fae5a0b625b0c0bc138301c9bad 160 Gene3D G3DSA:2.40.330.20 16 158 3.5E-45 T 14-10-2018 IPR038619 MraZ superfamily PACID_12760 26e75fae5a0b625b0c0bc138301c9bad 160 Pfam PF02381 MraZ protein, putative antitoxin-like 20 84 1.7E-14 T 14-10-2018 IPR020603 MraZ domain PACID_12760 26e75fae5a0b625b0c0bc138301c9bad 160 Pfam PF02381 MraZ protein, putative antitoxin-like 91 153 5.7E-18 T 14-10-2018 IPR020603 MraZ domain PACID_28200 6150d93d5775cdce147e9d954c40be80 335 PIRSF PIRSF001415 8 335 3.9E-139 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 SMART SM01004 14 334 3.9E-207 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 253 265 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 253 269 4.9E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 308 327 4.9E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 133 147 4.9E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 278 293 4.9E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 164 183 4.9E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 202 221 4.9E-54 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 SUPERFAMILY SSF51569 12 334 4.54E-128 T 14-10-2018 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 Gene3D G3DSA:3.20.20.70 10 335 2.4E-133 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_28200 6150d93d5775cdce147e9d954c40be80 335 Pfam PF00490 Delta-aminolevulinic acid dehydratase 17 331 2.6E-135 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 519 878 2.3E-92 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 SUPERFAMILY SSF51621 512 878 3.77E-118 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 6 880 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Gene3D G3DSA:1.10.189.10 347 529 3.0E-73 T 14-10-2018 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Pfam PF00391 PEP-utilising enzyme, mobile domain 422 503 4.6E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 SUPERFAMILY SSF56059 5 380 4.94E-138 T 14-10-2018 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 SUPERFAMILY SSF52009 387 511 9.42E-35 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Gene3D G3DSA:3.20.20.60 532 882 1.4E-142 T 14-10-2018 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 305 354 7.1E-10 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 64 291 1.3E-34 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Gene3D G3DSA:3.30.470.20 246 343 2.2E-41 T 14-10-2018 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Gene3D G3DSA:3.50.30.10 385 509 3.0E-73 T 14-10-2018 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Gene3D G3DSA:3.30.1490.20 13 245 8.0E-95 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 450 461 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 769 787 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 Gene3D G3DSA:1.20.80.30 113 200 8.0E-95 T 14-10-2018 PACID_07000 208b2dce2c321889c0353f9a788884c9 891 PIRSF PIRSF000853 4 888 0.0 T 14-10-2018 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PACID_22150 19d51dfa0e5968f754ee59583ccdb493 314 Gene3D G3DSA:1.10.443.10 126 308 4.5E-56 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PACID_22150 19d51dfa0e5968f754ee59583ccdb493 314 Gene3D G3DSA:1.10.150.130 18 112 5.3E-19 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PACID_22150 19d51dfa0e5968f754ee59583ccdb493 314 Pfam PF00589 Phage integrase family 134 299 2.7E-40 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PACID_22150 19d51dfa0e5968f754ee59583ccdb493 314 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 18 314 53.124 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD PACID_22150 19d51dfa0e5968f754ee59583ccdb493 314 SUPERFAMILY SSF56349 27 309 3.53E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PACID_22150 19d51dfa0e5968f754ee59583ccdb493 314 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 20 103 2.8E-14 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PACID_17450 d35b0e088b7038a654d64ae38a5b050c 141 SUPERFAMILY SSF82784 7 133 2.36E-26 T 14-10-2018 IPR036102 OsmC/Ohr superfamily PACID_17450 d35b0e088b7038a654d64ae38a5b050c 141 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 7 137 1.6E-42 T 14-10-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 PACID_17450 d35b0e088b7038a654d64ae38a5b050c 141 Pfam PF02566 OsmC-like protein 47 134 5.3E-15 T 14-10-2018 IPR003718 OsmC/Ohr family PACID_17450 d35b0e088b7038a654d64ae38a5b050c 141 Gene3D G3DSA:3.30.300.20 5 139 1.3E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_23820 999dcb0d0975b6cf2a8025e0a1bf89aa 167 Pfam PF00186 Dihydrofolate reductase 9 151 1.3E-46 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 PACID_23820 999dcb0d0975b6cf2a8025e0a1bf89aa 167 PIRSF PIRSF000194 3 163 4.6E-54 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 PACID_23820 999dcb0d0975b6cf2a8025e0a1bf89aa 167 SUPERFAMILY SSF53597 7 158 8.0E-44 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_23820 999dcb0d0975b6cf2a8025e0a1bf89aa 167 PRINTS PR00070 Dihydrofolate reductase signature 20 30 1.2E-9 T 14-10-2018 PACID_23820 999dcb0d0975b6cf2a8025e0a1bf89aa 167 PRINTS PR00070 Dihydrofolate reductase signature 34 42 1.2E-9 T 14-10-2018 PACID_23820 999dcb0d0975b6cf2a8025e0a1bf89aa 167 PRINTS PR00070 Dihydrofolate reductase signature 99 113 1.2E-9 T 14-10-2018 PACID_23820 999dcb0d0975b6cf2a8025e0a1bf89aa 167 PRINTS PR00070 Dihydrofolate reductase signature 47 58 1.2E-9 T 14-10-2018 PACID_23820 999dcb0d0975b6cf2a8025e0a1bf89aa 167 Gene3D G3DSA:3.40.430.10 7 165 1.3E-44 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_29110 e0c9e0e815fe6a90a6e46e2106e5410c 218 Gene3D G3DSA:3.40.30.10 57 217 1.9E-26 T 14-10-2018 PACID_29110 e0c9e0e815fe6a90a6e46e2106e5410c 218 SUPERFAMILY SSF52833 66 213 9.74E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_29110 e0c9e0e815fe6a90a6e46e2106e5410c 218 Pfam PF08534 Redoxin 77 198 5.5E-10 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 ProSitePatterns PS01244 Aconitase family signature 2. 400 413 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 Gene3D G3DSA:3.30.499.20 4 287 1.2E-98 T 14-10-2018 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 109 117 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 344 355 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 83 96 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 210 223 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 120 133 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 134 149 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 400 413 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 196 209 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 PRINTS PR00415 Aconitase family signature 287 301 6.3E-47 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 ProSitePatterns PS00450 Aconitase family signature 1. 340 356 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 SUPERFAMILY SSF53732 1 466 4.19E-164 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 Gene3D G3DSA:3.30.499.10 325 471 8.2E-50 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 460 8.3E-228 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 467 59.823 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 PACID_20510 d04c38266a435df1c6c359eabe929c44 471 Pfam PF00330 Aconitase family (aconitate hydratase) 7 458 1.6E-157 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 PACID_18380 ce916cb3fef0f74976a4d39868886187 230 SUPERFAMILY SSF55811 22 140 2.1E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_18380 ce916cb3fef0f74976a4d39868886187 230 Gene3D G3DSA:1.10.10.10 137 220 7.2E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18380 ce916cb3fef0f74976a4d39868886187 230 SUPERFAMILY SSF46785 144 214 1.33E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_18380 ce916cb3fef0f74976a4d39868886187 230 Gene3D G3DSA:3.90.79.10 2 133 3.2E-23 T 14-10-2018 PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 SUPERFAMILY SSF53850 3 184 4.23E-45 T 14-10-2018 PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 Pfam PF01842 ACT domain 195 257 4.7E-10 T 14-10-2018 IPR002912 ACT domain PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 PIRSF PIRSF001500 1 275 4.3E-57 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 Gene3D G3DSA:3.30.70.260 183 276 1.0E-31 T 14-10-2018 PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 220 227 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 SUPERFAMILY SSF55021 174 272 1.37E-24 T 14-10-2018 PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 Pfam PF00800 Prephenate dehydratase 3 180 5.0E-45 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 Gene3D G3DSA:3.40.190.10 1 85 2.4E-24 T 14-10-2018 PACID_31040 b6c974f8ba984e9e207218d95d31f0dd 318 Gene3D G3DSA:3.40.190.10 86 169 3.3E-26 T 14-10-2018 PACID_26340 2a2e66d6cdd4bd7adc2cf876b621629b 457 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 237 250 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26340 2a2e66d6cdd4bd7adc2cf876b621629b 457 Pfam PF00146 NADH dehydrogenase 20 353 1.1E-107 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26340 2a2e66d6cdd4bd7adc2cf876b621629b 457 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 61 76 - T 14-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26340 2a2e66d6cdd4bd7adc2cf876b621629b 457 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 13 360 22.902 T 14-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_13050 47ccfe912b5cd9cbdaf91a99300c6d38 199 Gene3D G3DSA:3.40.50.300 2 199 4.5E-65 T 14-10-2018 PACID_13050 47ccfe912b5cd9cbdaf91a99300c6d38 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 197 25.992 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PACID_13050 47ccfe912b5cd9cbdaf91a99300c6d38 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 178 3.1E-44 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PACID_13050 47ccfe912b5cd9cbdaf91a99300c6d38 199 Pfam PF01121 Dephospho-CoA kinase 5 178 4.6E-53 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 PACID_13050 47ccfe912b5cd9cbdaf91a99300c6d38 199 SUPERFAMILY SSF52540 3 195 3.74E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_33990 4bd1598abcfe3cde7a00aaf1bdd81ece 395 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 151 210 1.6E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_33990 4bd1598abcfe3cde7a00aaf1bdd81ece 395 Gene3D G3DSA:3.30.360.10 136 394 5.0E-52 T 14-10-2018 PACID_33990 4bd1598abcfe3cde7a00aaf1bdd81ece 395 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 133 1.8E-27 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_33990 4bd1598abcfe3cde7a00aaf1bdd81ece 395 Gene3D G3DSA:3.40.50.720 1 135 7.0E-34 T 14-10-2018 PACID_33990 4bd1598abcfe3cde7a00aaf1bdd81ece 395 SUPERFAMILY SSF51735 2 165 3.6E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_33990 4bd1598abcfe3cde7a00aaf1bdd81ece 395 SUPERFAMILY SSF55347 139 301 5.4E-25 T 14-10-2018 PACID_13980 4b9de02957f22f4363c8e4f4986ae4ab 210 Gene3D G3DSA:1.10.357.10 4 209 4.2E-48 T 14-10-2018 PACID_13980 4b9de02957f22f4363c8e4f4986ae4ab 210 SUPERFAMILY SSF46689 10 72 1.03E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_13980 4b9de02957f22f4363c8e4f4986ae4ab 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 4.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_13980 4b9de02957f22f4363c8e4f4986ae4ab 210 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 4.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_13980 4b9de02957f22f4363c8e4f4986ae4ab 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 1.9E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_01720 2bfc26ac8cbdb3d4341e451113f62d6d 316 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 46 270 6.4E-48 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 PACID_01720 2bfc26ac8cbdb3d4341e451113f62d6d 316 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 25 316 2.2E-135 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PACID_01720 2bfc26ac8cbdb3d4341e451113f62d6d 316 SUPERFAMILY SSF52402 22 223 8.38E-63 T 14-10-2018 PACID_01720 2bfc26ac8cbdb3d4341e451113f62d6d 316 Gene3D G3DSA:3.40.50.620 23 226 4.4E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_01720 2bfc26ac8cbdb3d4341e451113f62d6d 316 PIRSF PIRSF002936 16 316 1.2E-136 T 14-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 121 134 - T 14-10-2018 IPR033135 ClpP, histidine active site PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 PRINTS PR00127 Clp protease catalytic subunit P signature 99 116 5.8E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 PRINTS PR00127 Clp protease catalytic subunit P signature 120 139 5.8E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 PRINTS PR00127 Clp protease catalytic subunit P signature 177 196 5.8E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 PRINTS PR00127 Clp protease catalytic subunit P signature 68 88 5.8E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 PRINTS PR00127 Clp protease catalytic subunit P signature 28 43 5.8E-46 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 SUPERFAMILY SSF52096 28 203 2.92E-63 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 Pfam PF00574 Clp protease 26 201 3.8E-75 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 11 202 38.797 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22780 bf7af70673e5ae71d2828eab3abc6c02 212 Gene3D G3DSA:3.90.226.10 10 207 2.7E-71 T 14-10-2018 PACID_09250 8904fe89ed2ec4057fcc0aff6d9f1ff9 375 SUPERFAMILY SSF51556 48 342 6.06E-84 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_09250 8904fe89ed2ec4057fcc0aff6d9f1ff9 375 Gene3D G3DSA:2.30.40.10 8 370 2.2E-106 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_09250 8904fe89ed2ec4057fcc0aff6d9f1ff9 375 Gene3D G3DSA:3.20.20.140 49 340 2.2E-106 T 14-10-2018 PACID_09250 8904fe89ed2ec4057fcc0aff6d9f1ff9 375 SUPERFAMILY SSF51338 2 373 2.34E-6 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_09250 8904fe89ed2ec4057fcc0aff6d9f1ff9 375 Pfam PF01979 Amidohydrolase family 45 359 7.3E-17 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PACID_09250 8904fe89ed2ec4057fcc0aff6d9f1ff9 375 PIRSF PIRSF038994 2 375 6.1E-99 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 PACID_21420 f7c785f617ceb8ed0295f3b76a394351 111 SUPERFAMILY SSF103481 21 109 4.58E-14 T 14-10-2018 PACID_21420 f7c785f617ceb8ed0295f3b76a394351 111 Pfam PF00892 EamA-like transporter family 12 109 1.1E-8 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_27290 b070d9777b0fdab364d0a994b5daa6df 187 Pfam PF00578 AhpC/TSA family 18 133 1.3E-29 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PACID_27290 b070d9777b0fdab364d0a994b5daa6df 187 Gene3D G3DSA:3.40.30.10 1 186 1.7E-54 T 14-10-2018 PACID_27290 b070d9777b0fdab364d0a994b5daa6df 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 7.2E-6 T 14-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PACID_27290 b070d9777b0fdab364d0a994b5daa6df 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.0E-95 T 14-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 PACID_27290 b070d9777b0fdab364d0a994b5daa6df 187 PIRSF PIRSF000239 1 187 1.1E-48 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PACID_27290 b070d9777b0fdab364d0a994b5daa6df 187 SUPERFAMILY SSF52833 1 186 1.4E-52 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_05050 3a034026f4cda4f08466d3ac676e7f6a 169 SMART SM00347 42 140 3.7E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_05050 3a034026f4cda4f08466d3ac676e7f6a 169 Pfam PF01047 MarR family 49 107 7.0E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_05050 3a034026f4cda4f08466d3ac676e7f6a 169 Gene3D G3DSA:1.10.10.10 2 156 4.9E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_05050 3a034026f4cda4f08466d3ac676e7f6a 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 102 118 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_05050 3a034026f4cda4f08466d3ac676e7f6a 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 83 98 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_05050 3a034026f4cda4f08466d3ac676e7f6a 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 82 1.9E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_05050 3a034026f4cda4f08466d3ac676e7f6a 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 81 115 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PACID_05050 3a034026f4cda4f08466d3ac676e7f6a 169 SUPERFAMILY SSF46785 20 155 4.03E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_10070 576982b81565b1da4a91cd38021d1e20 409 Pfam PF13180 PDZ domain 307 403 1.2E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 Gene3D G3DSA:2.30.42.10 304 408 7.5E-20 T 14-10-2018 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 SUPERFAMILY SSF50156 334 407 1.17E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 Pfam PF13365 Trypsin-like peptidase domain 120 263 1.4E-23 T 14-10-2018 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 243 254 - T 14-10-2018 IPR033116 Serine proteases, trypsin family, serine active site PACID_10070 576982b81565b1da4a91cd38021d1e20 409 Gene3D G3DSA:2.40.10.120 84 296 2.7E-40 T 14-10-2018 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 SUPERFAMILY SSF50494 98 291 4.28E-36 T 14-10-2018 IPR009003 Peptidase S1, PA clan PACID_10070 576982b81565b1da4a91cd38021d1e20 409 PRINTS PR00834 HtrA/DegQ protease family signature 234 251 3.5E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 PRINTS PR00834 HtrA/DegQ protease family signature 351 363 3.5E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 3.5E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 PRINTS PR00834 HtrA/DegQ protease family signature 256 273 3.5E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 PRINTS PR00834 HtrA/DegQ protease family signature 129 141 3.5E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 PRINTS PR00834 HtrA/DegQ protease family signature 191 215 3.5E-24 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_10070 576982b81565b1da4a91cd38021d1e20 409 SMART SM00228 306 393 2.1E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PACID_21930 3331def395e9462626b85be1ea2426bd 302 Pfam PF04168 A predicted alpha-helical domain with a conserved ER motif. 1 291 5.0E-68 T 14-10-2018 IPR007296 Domain of unknown function DUF403 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 4.0E-47 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 Pfam PF00117 Glutamine amidotransferase class-I 175 350 4.4E-43 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 Gene3D G3DSA:3.50.30.20 2 146 2.6E-51 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 SMART SM01097 2 132 5.9E-78 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 354 9.4E-139 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 212 226 8.4E-37 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 259 276 8.4E-37 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 173 187 8.4E-37 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 284 295 8.4E-37 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 242 258 8.4E-37 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 SUPERFAMILY SSF52021 2 140 5.75E-51 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00096 Glutamine amidotransferase superfamily signature 328 341 2.4E-12 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00096 Glutamine amidotransferase superfamily signature 215 224 2.4E-12 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00096 Glutamine amidotransferase superfamily signature 242 253 2.4E-12 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 2 357 46.127 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 Gene3D G3DSA:3.40.50.880 147 356 8.0E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00097 Anthranilate synthase component II signature 215 224 1.6E-7 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00097 Anthranilate synthase component II signature 242 253 1.6E-7 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 PRINTS PR00097 Anthranilate synthase component II signature 328 341 1.6E-7 T 14-10-2018 PACID_15080 2d1156632a0ad126acc9c1eb3f7b3fc4 388 SUPERFAMILY SSF52317 150 355 2.62E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_04820 b522019a9f010a9b0e26eba2a2a7fb4c 280 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 64 77 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site PACID_04820 b522019a9f010a9b0e26eba2a2a7fb4c 280 Gene3D G3DSA:3.40.190.10 43 259 2.9E-64 T 14-10-2018 PACID_04820 b522019a9f010a9b0e26eba2a2a7fb4c 280 SUPERFAMILY SSF53850 13 258 2.85E-55 T 14-10-2018 PACID_04820 b522019a9f010a9b0e26eba2a2a7fb4c 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 257 6.6E-53 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_04820 b522019a9f010a9b0e26eba2a2a7fb4c 280 SMART SM00062 42 264 1.5E-63 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_04820 b522019a9f010a9b0e26eba2a2a7fb4c 280 Gene3D G3DSA:3.40.190.10 126 227 2.9E-64 T 14-10-2018 PACID_31290 560d2ff478adac6920156c5c1ae01763 248 SUPERFAMILY SSF53335 33 222 1.32E-18 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_31290 560d2ff478adac6920156c5c1ae01763 248 Gene3D G3DSA:2.20.130.10 146 206 1.3E-27 T 14-10-2018 PACID_31290 560d2ff478adac6920156c5c1ae01763 248 Pfam PF13649 Methyltransferase domain 40 133 8.3E-11 T 14-10-2018 PACID_31290 560d2ff478adac6920156c5c1ae01763 248 Gene3D G3DSA:3.40.50.150 25 221 1.3E-27 T 14-10-2018 PACID_06880 635f7db8914b348fc14de5459cb8c89c 208 SUPERFAMILY SSF46689 2 67 1.49E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_06880 635f7db8914b348fc14de5459cb8c89c 208 Gene3D G3DSA:1.10.357.10 65 193 1.7E-30 T 14-10-2018 PACID_06880 635f7db8914b348fc14de5459cb8c89c 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 60 8.4E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_06880 635f7db8914b348fc14de5459cb8c89c 208 Gene3D G3DSA:1.10.10.60 3 63 3.0E-21 T 14-10-2018 PACID_06880 635f7db8914b348fc14de5459cb8c89c 208 SUPERFAMILY SSF48498 84 192 5.78E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_06880 635f7db8914b348fc14de5459cb8c89c 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 5.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_06880 635f7db8914b348fc14de5459cb8c89c 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 5.2E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_05060 990447fc6995236e9857432dc813ac94 171 Gene3D G3DSA:3.40.30.10 1 171 2.8E-47 T 14-10-2018 PACID_05060 990447fc6995236e9857432dc813ac94 171 PRINTS PR01011 Glutathione peroxidase family signature 133 142 2.6E-11 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PACID_05060 990447fc6995236e9857432dc813ac94 171 PRINTS PR01011 Glutathione peroxidase family signature 66 82 2.6E-11 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PACID_05060 990447fc6995236e9857432dc813ac94 171 PRINTS PR01011 Glutathione peroxidase family signature 31 48 2.6E-11 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PACID_05060 990447fc6995236e9857432dc813ac94 171 PIRSF PIRSF000303 1 171 5.0E-53 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PACID_05060 990447fc6995236e9857432dc813ac94 171 SUPERFAMILY SSF52833 13 170 2.51E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_05060 990447fc6995236e9857432dc813ac94 171 Pfam PF00255 Glutathione peroxidase 15 120 6.4E-33 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 PACID_29210 91d0034a461db9e4c3a812abc11d81e3 663 SUPERFAMILY SSF53474 4 240 1.77E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_14280 ec21cc3c0c0bf463e355d8872d48f689 416 Gene3D G3DSA:1.20.1250.20 9 399 2.5E-37 T 14-10-2018 PACID_14280 ec21cc3c0c0bf463e355d8872d48f689 416 Pfam PF07690 Major Facilitator Superfamily 26 357 5.8E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_14280 ec21cc3c0c0bf463e355d8872d48f689 416 SUPERFAMILY SSF103473 10 398 9.42E-45 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_16780 fd65616c5821d1e6a4c912e33d0dc5a2 278 Pfam PF03167 Uracil DNA glycosylase superfamily 93 268 1.2E-22 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_16780 fd65616c5821d1e6a4c912e33d0dc5a2 278 SMART SM00986 93 269 1.5E-24 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_16780 fd65616c5821d1e6a4c912e33d0dc5a2 278 SUPERFAMILY SSF52141 51 275 1.96E-38 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_16780 fd65616c5821d1e6a4c912e33d0dc5a2 278 Gene3D G3DSA:3.40.470.10 50 277 3.7E-57 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_16780 fd65616c5821d1e6a4c912e33d0dc5a2 278 SMART SM00987 93 269 1.5E-24 T 14-10-2018 PACID_24920 cd128588f6d4c50464adbf056d53ffc8 489 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 137 269 1.2E-8 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like PACID_31200 30635862d80a2a0793708eb132efba96 473 ProSitePatterns PS00217 Sugar transport proteins signature 2. 139 164 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_31200 30635862d80a2a0793708eb132efba96 473 Pfam PF00083 Sugar (and other) transporter 36 231 4.0E-26 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_31200 30635862d80a2a0793708eb132efba96 473 Pfam PF00083 Sugar (and other) transporter 251 444 1.6E-7 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_31200 30635862d80a2a0793708eb132efba96 473 ProSitePatterns PS00216 Sugar transport proteins signature 1. 312 329 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_31200 30635862d80a2a0793708eb132efba96 473 SUPERFAMILY SSF103473 18 443 9.16E-69 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_31200 30635862d80a2a0793708eb132efba96 473 Gene3D G3DSA:1.20.1250.20 30 451 2.5E-66 T 14-10-2018 PACID_16090 cd66d5d9898e4cc1092ae2457a2053f4 182 SUPERFAMILY SSF55729 20 167 1.03E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_16090 cd66d5d9898e4cc1092ae2457a2053f4 182 Pfam PF13673 Acetyltransferase (GNAT) domain 62 179 4.8E-8 T 14-10-2018 IPR000182 GNAT domain PACID_16090 cd66d5d9898e4cc1092ae2457a2053f4 182 Gene3D G3DSA:3.40.630.30 21 178 5.4E-22 T 14-10-2018 PACID_11060 6fabf9c3e18a573c9854a7b4ef8ff27f 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 323 340 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_11060 6fabf9c3e18a573c9854a7b4ef8ff27f 500 SUPERFAMILY SSF103473 35 456 7.19E-64 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_11060 6fabf9c3e18a573c9854a7b4ef8ff27f 500 Pfam PF00083 Sugar (and other) transporter 43 455 1.1E-37 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_11060 6fabf9c3e18a573c9854a7b4ef8ff27f 500 Gene3D G3DSA:1.20.1250.20 38 461 2.7E-65 T 14-10-2018 PACID_11060 6fabf9c3e18a573c9854a7b4ef8ff27f 500 ProSitePatterns PS00217 Sugar transport proteins signature 2. 149 174 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_08230 e634497ad8da287eccaf797598e9afef 348 Gene3D G3DSA:3.90.180.10 14 328 1.4E-87 T 14-10-2018 PACID_08230 e634497ad8da287eccaf797598e9afef 348 Gene3D G3DSA:3.40.50.720 155 294 1.4E-87 T 14-10-2018 PACID_08230 e634497ad8da287eccaf797598e9afef 348 SUPERFAMILY SSF51735 146 315 9.17E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_08230 e634497ad8da287eccaf797598e9afef 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 128 1.5E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_08230 e634497ad8da287eccaf797598e9afef 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_08230 e634497ad8da287eccaf797598e9afef 348 SMART SM00829 7 346 2.8E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_08230 e634497ad8da287eccaf797598e9afef 348 SUPERFAMILY SSF50129 1 176 1.89E-46 T 14-10-2018 IPR011032 GroES-like superfamily PACID_08230 e634497ad8da287eccaf797598e9afef 348 Pfam PF00107 Zinc-binding dehydrogenase 177 309 1.2E-19 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_18370 b9b2b58a6cfbf49ef4add7de8b78d3ea 340 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 27 333 7.6E-87 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PACID_18370 b9b2b58a6cfbf49ef4add7de8b78d3ea 340 Gene3D G3DSA:3.40.50.10800 27 314 1.9E-108 T 14-10-2018 PACID_18370 b9b2b58a6cfbf49ef4add7de8b78d3ea 340 Pfam PF02445 Quinolinate synthetase A protein 28 331 1.7E-108 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PACID_18370 b9b2b58a6cfbf49ef4add7de8b78d3ea 340 SUPERFAMILY SSF142754 25 332 3.53E-102 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 PACID_18370 b9b2b58a6cfbf49ef4add7de8b78d3ea 340 Gene3D G3DSA:3.40.50.10800 107 331 1.9E-108 T 14-10-2018 PACID_18370 b9b2b58a6cfbf49ef4add7de8b78d3ea 340 Gene3D G3DSA:3.40.50.10800 192 289 1.9E-108 T 14-10-2018 PACID_02030 9220c657a6499055bb5164d69003958c 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 33 73 7.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_02030 9220c657a6499055bb5164d69003958c 199 Gene3D G3DSA:1.10.357.10 21 198 9.7E-31 T 14-10-2018 PACID_02030 9220c657a6499055bb5164d69003958c 199 SUPERFAMILY SSF46689 22 78 1.65E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 Gene3D G3DSA:2.60.120.260 365 496 9.1E-71 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 SUPERFAMILY SSF51445 18 345 3.52E-88 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 169 181 - T 14-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 Pfam PF01301 Glycosyl hydrolases family 35 23 345 8.8E-99 T 14-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 Gene3D G3DSA:3.20.20.80 10 292 1.1E-89 T 14-10-2018 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 PIRSF PIRSF006336 9 607 5.6E-177 T 14-10-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 PRINTS PR00742 Glycosyl hydrolase family 35 signature 103 122 1.7E-38 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 PRINTS PR00742 Glycosyl hydrolase family 35 signature 288 303 1.7E-38 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 PRINTS PR00742 Glycosyl hydrolase family 35 signature 315 331 1.7E-38 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 PRINTS PR00742 Glycosyl hydrolase family 35 signature 26 43 1.7E-38 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 PRINTS PR00742 Glycosyl hydrolase family 35 signature 47 65 1.7E-38 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 PRINTS PR00742 Glycosyl hydrolase family 35 signature 253 268 1.7E-38 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 PRINTS PR00742 Glycosyl hydrolase family 35 signature 544 560 1.7E-38 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 Gene3D G3DSA:2.60.120.260 293 586 9.1E-71 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_06080 73efd01a5655d56c1696d43e5f4e6bc8 610 SUPERFAMILY SSF49785 457 591 7.78E-19 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 601 1078 33.806 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 SUPERFAMILY SSF55681 733 1076 1.61E-100 T 14-10-2018 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 Gene3D G3DSA:2.40.50.140 595 725 1.1E-23 T 14-10-2018 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 Pfam PF16995 Transmembrane region of lysyl-tRNA synthetase 26 209 2.3E-16 T 14-10-2018 IPR031553 Lysyl-tRNA synthetase, N-terminal transmembrane region KEGG: 00970+6.1.1.6 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 SUPERFAMILY SSF50249 595 726 4.07E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 Pfam PF00152 tRNA synthetases class II (D, K and N) 735 1075 2.6E-71 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 Pfam PF01336 OB-fold nucleic acid binding domain 640 714 1.8E-9 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 637 1077 4.9E-133 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 228 532 4.5E-93 T 14-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 PRINTS PR00982 Lysyl-tRNA synthetase signature 786 802 2.2E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 PRINTS PR00982 Lysyl-tRNA synthetase signature 833 850 2.2E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 PRINTS PR00982 Lysyl-tRNA synthetase signature 770 780 2.2E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 PRINTS PR00982 Lysyl-tRNA synthetase signature 815 828 2.2E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 PRINTS PR00982 Lysyl-tRNA synthetase signature 961 977 2.2E-29 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_23030 5abc31f0c41c9235efe122a02a39cd60 1081 Gene3D G3DSA:3.30.930.10 729 1081 4.6E-111 T 14-10-2018 PACID_22470 ed819b6c13cd5d7c3111840a86a2c00d 427 Gene3D G3DSA:3.40.640.10 40 301 1.1E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_22470 ed819b6c13cd5d7c3111840a86a2c00d 427 Pfam PF00266 Aminotransferase class-V 29 401 2.7E-137 T 14-10-2018 IPR000192 Aminotransferase class V domain PACID_22470 ed819b6c13cd5d7c3111840a86a2c00d 427 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 11 412 3.2E-164 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 PACID_22470 ed819b6c13cd5d7c3111840a86a2c00d 427 SUPERFAMILY SSF53383 7 407 4.62E-119 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_22470 ed819b6c13cd5d7c3111840a86a2c00d 427 Gene3D G3DSA:3.90.1150.10 12 404 1.1E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_02890 b785eac0f549a9be318c67cabd433f39 533 Gene3D G3DSA:3.40.50.300 274 532 4.6E-48 T 14-10-2018 PACID_02890 b785eac0f549a9be318c67cabd433f39 533 Pfam PF00005 ABC transporter 287 441 1.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_02890 b785eac0f549a9be318c67cabd433f39 533 SMART SM00382 39 236 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_02890 b785eac0f549a9be318c67cabd433f39 533 SMART SM00382 296 490 1.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_02890 b785eac0f549a9be318c67cabd433f39 533 ProSitePatterns PS00211 ABC transporters family signature. 414 428 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_02890 b785eac0f549a9be318c67cabd433f39 533 SUPERFAMILY SSF52540 13 239 7.94E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_02890 b785eac0f549a9be318c67cabd433f39 533 Pfam PF00005 ABC transporter 30 180 1.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_02890 b785eac0f549a9be318c67cabd433f39 533 SUPERFAMILY SSF52540 286 502 1.51E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_02890 b785eac0f549a9be318c67cabd433f39 533 Gene3D G3DSA:3.40.50.300 3 254 2.9E-59 T 14-10-2018 PACID_04750 a9a5892960219651f6454397ba6b6858 318 Gene3D G3DSA:3.40.960.10 196 308 7.6E-7 T 14-10-2018 PACID_19840 8836f308cf5bdef119b25835fb102a98 194 Pfam PF07681 DoxX 7 101 7.3E-7 T 14-10-2018 IPR032808 DoxX family PACID_04570 ce1a9cab283b3808b50bb736de6f8d6f 762 SUPERFAMILY SSF56601 242 662 1.56E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_04570 ce1a9cab283b3808b50bb736de6f8d6f 762 Gene3D G3DSA:1.10.3810.10 73 272 6.0E-65 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_04570 ce1a9cab283b3808b50bb736de6f8d6f 762 Gene3D G3DSA:3.40.710.10 287 661 6.1E-91 T 14-10-2018 PACID_04570 ce1a9cab283b3808b50bb736de6f8d6f 762 SUPERFAMILY SSF53955 71 272 1.91E-61 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PACID_04570 ce1a9cab283b3808b50bb736de6f8d6f 762 Pfam PF00912 Transglycosylase 83 256 5.8E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_04570 ce1a9cab283b3808b50bb736de6f8d6f 762 Pfam PF00905 Penicillin binding protein transpeptidase domain 363 605 2.7E-31 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 310 316 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 427 601 9.8E-36 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 90 336 2.8E-34 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 521 537 6.7E-5 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 493 509 6.7E-5 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 Gene3D G3DSA:3.40.1110.10 319 452 4.9E-84 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 Pfam PF00702 haloacid dehalogenase-like hydrolase 304 535 2.7E-39 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 Gene3D G3DSA:3.40.50.1000 289 574 4.9E-84 T 14-10-2018 IPR023214 HAD superfamily PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 66 624 2.3E-164 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 Pfam PF00122 E1-E2 ATPase 118 287 3.7E-47 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 SUPERFAMILY SSF56784 306 622 2.06E-49 T 14-10-2018 IPR036412 HAD-like superfamily PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 308 322 7.4E-24 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 166 180 7.4E-24 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 545 557 7.4E-24 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 468 478 7.4E-24 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 521 540 7.4E-24 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 445 456 7.4E-24 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 Gene3D G3DSA:2.70.150.20 109 221 1.3E-33 T 14-10-2018 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 SUPERFAMILY SSF81665 69 600 2.09E-15 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PACID_02370 1cdf1c6a943259733ae04664ed0f9cee 669 SUPERFAMILY SSF81653 119 215 7.59E-25 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PACID_02560 b000ecda8266ab5697716992e40bc512 662 Gene3D G3DSA:2.40.50.100 581 653 9.0E-15 T 14-10-2018 PACID_02560 b000ecda8266ab5697716992e40bc512 662 Gene3D G3DSA:3.40.50.300 308 535 1.9E-62 T 14-10-2018 PACID_02560 b000ecda8266ab5697716992e40bc512 662 Pfam PF03459 TOBE domain 595 656 2.5E-11 T 14-10-2018 IPR005116 Transport-associated OB, type 1 PACID_02560 b000ecda8266ab5697716992e40bc512 662 SUPERFAMILY SSF50331 534 657 1.5E-18 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PACID_02560 b000ecda8266ab5697716992e40bc512 662 SMART SM00382 316 509 8.1E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_02560 b000ecda8266ab5697716992e40bc512 662 SUPERFAMILY SSF52540 308 533 4.36E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_02560 b000ecda8266ab5697716992e40bc512 662 SUPERFAMILY SSF161098 19 264 1.57E-41 T 14-10-2018 IPR035906 MetI-like superfamily PACID_02560 b000ecda8266ab5697716992e40bc512 662 Gene3D G3DSA:1.10.3720.10 17 266 5.3E-49 T 14-10-2018 IPR035906 MetI-like superfamily PACID_02560 b000ecda8266ab5697716992e40bc512 662 Pfam PF00005 ABC transporter 309 460 5.1E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_02560 b000ecda8266ab5697716992e40bc512 662 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 79 270 8.5E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_02560 b000ecda8266ab5697716992e40bc512 662 Gene3D G3DSA:2.40.50.140 536 656 9.0E-15 T 14-10-2018 PACID_02560 b000ecda8266ab5697716992e40bc512 662 ProSitePatterns PS00211 ABC transporters family signature. 432 446 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_06930 df542b9bb36120bffa6598364b89509b 293 Gene3D G3DSA:1.10.3720.10 17 281 4.9E-55 T 14-10-2018 IPR035906 MetI-like superfamily PACID_06930 df542b9bb36120bffa6598364b89509b 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 286 7.2E-25 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_06930 df542b9bb36120bffa6598364b89509b 293 SUPERFAMILY SSF161098 25 293 1.12E-61 T 14-10-2018 IPR035906 MetI-like superfamily PACID_26820 d7010bedebb2b418c74cb06895b84234 330 Pfam PF13280 WYL domain 145 315 2.7E-30 T 14-10-2018 IPR026881 WYL domain PACID_26820 d7010bedebb2b418c74cb06895b84234 330 Gene3D G3DSA:1.10.10.10 7 67 1.3E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_26820 d7010bedebb2b418c74cb06895b84234 330 SUPERFAMILY SSF46785 8 63 7.74E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_26820 d7010bedebb2b418c74cb06895b84234 330 Pfam PF08279 HTH domain 9 60 9.4E-10 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 PACID_26820 d7010bedebb2b418c74cb06895b84234 330 PIRSF PIRSF016838 1 322 1.5E-24 T 14-10-2018 IPR028349 Protein PafC PACID_26820 d7010bedebb2b418c74cb06895b84234 330 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PACID_05610 de14387a71b27cf5fecb42b770ba9317 513 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 44 480 4.3E-87 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 PACID_05610 de14387a71b27cf5fecb42b770ba9317 513 Gene3D G3DSA:1.10.4160.10 26 512 8.9E-109 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily PACID_09350 654a55d17201f29ccba87322b15ed777 350 SMART SM00354 11 81 4.0E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_09350 654a55d17201f29ccba87322b15ed777 350 SUPERFAMILY SSF53822 74 339 4.28E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_09350 654a55d17201f29ccba87322b15ed777 350 Gene3D G3DSA:1.10.260.40 4 67 3.4E-20 T 14-10-2018 PACID_09350 654a55d17201f29ccba87322b15ed777 350 Gene3D G3DSA:3.40.50.2300 78 330 1.2E-55 T 14-10-2018 PACID_09350 654a55d17201f29ccba87322b15ed777 350 Pfam PF13377 Periplasmic binding protein-like domain 175 338 4.2E-29 T 14-10-2018 PACID_09350 654a55d17201f29ccba87322b15ed777 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 58 4.5E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_09350 654a55d17201f29ccba87322b15ed777 350 SUPERFAMILY SSF47413 10 68 8.85E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_09350 654a55d17201f29ccba87322b15ed777 350 Gene3D G3DSA:3.40.50.2300 167 335 1.2E-55 T 14-10-2018 PACID_09350 654a55d17201f29ccba87322b15ed777 350 ProSitePatterns PS00356 LacI-type HTH domain signature. 14 32 - T 14-10-2018 PACID_32070 9206275670903b5223ec049263b20ebe 156 Gene3D G3DSA:3.40.50.2300 1 155 1.7E-42 T 14-10-2018 PACID_32070 9206275670903b5223ec049263b20ebe 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 145 1.2E-30 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PACID_32070 9206275670903b5223ec049263b20ebe 156 SMART SM00226 5 151 1.2E-31 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PACID_32070 9206275670903b5223ec049263b20ebe 156 SUPERFAMILY SSF52788 3 152 2.49E-38 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PACID_32070 9206275670903b5223ec049263b20ebe 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 7 24 9.4E-12 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PACID_32070 9206275670903b5223ec049263b20ebe 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 9.4E-12 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PACID_32070 9206275670903b5223ec049263b20ebe 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 82 97 9.4E-12 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 PACID_05660 f854207bea30c8f2a69062f625a8e5cc 250 Gene3D G3DSA:3.30.70.1880 99 249 1.2E-27 T 14-10-2018 PACID_05660 f854207bea30c8f2a69062f625a8e5cc 250 Pfam PF05949 Bacterial protein of unknown function (DUF881) 100 246 7.2E-40 T 14-10-2018 IPR010273 Protein of unknown function DUF881 PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 405 17.84 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 7 151 4.8E-24 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 SUPERFAMILY SSF51735 170 261 7.9E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 PIRSF PIRSF000445 2 414 7.2E-79 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 169 298 1.3E-11 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 SUPERFAMILY SSF69742 3 152 4.71E-26 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 312 404 2.8E-7 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 Gene3D G3DSA:3.30.460.30 3 153 2.6E-28 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 PACID_28140 abbea6bb850aaf764fa5e69ddb941550 477 Gene3D G3DSA:3.40.50.720 158 306 3.3E-27 T 14-10-2018 PACID_31110 2acb5fbb4a646cd28e177ab08aae1218 375 Gene3D G3DSA:3.40.50.970 53 243 3.5E-70 T 14-10-2018 PACID_31110 2acb5fbb4a646cd28e177ab08aae1218 375 Pfam PF02779 Transketolase, pyrimidine binding domain 57 229 5.0E-38 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_31110 2acb5fbb4a646cd28e177ab08aae1218 375 SUPERFAMILY SSF52518 56 239 1.55E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_31110 2acb5fbb4a646cd28e177ab08aae1218 375 Gene3D G3DSA:3.40.50.920 244 374 8.5E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_31110 2acb5fbb4a646cd28e177ab08aae1218 375 SMART SM00861 56 231 2.0E-60 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_31110 2acb5fbb4a646cd28e177ab08aae1218 375 SUPERFAMILY SSF52922 241 371 1.15E-37 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_31110 2acb5fbb4a646cd28e177ab08aae1218 375 Pfam PF02780 Transketolase, C-terminal domain 245 365 3.5E-36 T 14-10-2018 IPR033248 Transketolase, C-terminal domain PACID_06400 60d0fda417f89d09de7cbb719d201565 864 Pfam PF00271 Helicase conserved C-terminal domain 310 388 2.9E-6 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_06400 60d0fda417f89d09de7cbb719d201565 864 Gene3D G3DSA:3.40.50.300 227 405 1.7E-41 T 14-10-2018 PACID_06400 60d0fda417f89d09de7cbb719d201565 864 SUPERFAMILY SSF52540 68 396 8.83E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06400 60d0fda417f89d09de7cbb719d201565 864 SMART SM00490 302 388 5.5E-12 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_06400 60d0fda417f89d09de7cbb719d201565 864 SMART SM00487 52 237 1.7E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_06400 60d0fda417f89d09de7cbb719d201565 864 Gene3D G3DSA:3.40.50.300 37 226 7.3E-39 T 14-10-2018 PACID_06400 60d0fda417f89d09de7cbb719d201565 864 Pfam PF00270 DEAD/DEAH box helicase 58 206 6.2E-13 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_06400 60d0fda417f89d09de7cbb719d201565 864 Pfam PF12029 Domain of unknown function (DUF3516) 399 857 4.9E-193 T 14-10-2018 IPR021904 Protein of unknown function DUF3516 PACID_31690 c9f32adae188785b93ae68fa8c5c3293 237 Gene3D G3DSA:1.10.10.10 17 91 2.8E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_31690 c9f32adae188785b93ae68fa8c5c3293 237 SUPERFAMILY SSF46785 20 205 2.05E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_31690 c9f32adae188785b93ae68fa8c5c3293 237 Pfam PF13412 Winged helix-turn-helix DNA-binding 22 62 1.8E-5 T 14-10-2018 PACID_09420 63c80ba3c9c3e09251471485ebc76f61 121 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 115 1.3E-30 T 14-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L PACID_09420 63c80ba3c9c3e09251471485ebc76f61 121 Gene3D G3DSA:1.10.1200.120 1 119 3.5E-30 T 14-10-2018 IPR036019 Gated mechanosensitive channel PACID_09420 63c80ba3c9c3e09251471485ebc76f61 121 SUPERFAMILY SSF81330 9 112 7.45E-22 T 14-10-2018 IPR036019 Gated mechanosensitive channel PACID_09420 63c80ba3c9c3e09251471485ebc76f61 121 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 118 7.5E-24 T 14-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 PACID_31390 208064c4b37ac964317bbf49e42c023a 845 Gene3D G3DSA:2.70.98.40 13 309 1.4E-60 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily PACID_31390 208064c4b37ac964317bbf49e42c023a 845 Gene3D G3DSA:2.60.420.10 728 807 9.5E-18 T 14-10-2018 PACID_31390 208064c4b37ac964317bbf49e42c023a 845 Gene3D G3DSA:1.50.10.10 357 727 4.4E-124 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 PACID_31390 208064c4b37ac964317bbf49e42c023a 845 PIRSF PIRSF036289 228 808 2.6E-159 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase PACID_31390 208064c4b37ac964317bbf49e42c023a 845 PIRSF PIRSF036289 11 211 6.2E-37 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase PACID_31390 208064c4b37ac964317bbf49e42c023a 845 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 748 797 6.8E-12 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal PACID_31390 208064c4b37ac964317bbf49e42c023a 845 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 27 307 1.5E-60 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 PACID_31390 208064c4b37ac964317bbf49e42c023a 845 SUPERFAMILY SSF74650 14 307 1.22E-57 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PACID_31390 208064c4b37ac964317bbf49e42c023a 845 SUPERFAMILY SSF48208 312 796 1.25E-116 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_31390 208064c4b37ac964317bbf49e42c023a 845 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 363 737 3.0E-116 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 PACID_26510 ad3fc23b6cb00183b9a16e3a7248df5b 600 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_26510 ad3fc23b6cb00183b9a16e3a7248df5b 600 Pfam PF00005 ABC transporter 362 512 1.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_26510 ad3fc23b6cb00183b9a16e3a7248df5b 600 Gene3D G3DSA:3.40.50.300 337 585 7.8E-88 T 14-10-2018 PACID_26510 ad3fc23b6cb00183b9a16e3a7248df5b 600 Pfam PF00664 ABC transporter transmembrane region 22 293 1.9E-34 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_26510 ad3fc23b6cb00183b9a16e3a7248df5b 600 Gene3D G3DSA:1.20.1560.10 1 323 3.4E-54 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_26510 ad3fc23b6cb00183b9a16e3a7248df5b 600 SUPERFAMILY SSF90123 6 322 4.19E-53 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_26510 ad3fc23b6cb00183b9a16e3a7248df5b 600 SUPERFAMILY SSF52540 343 582 1.44E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_26510 ad3fc23b6cb00183b9a16e3a7248df5b 600 SMART SM00382 371 558 5.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_12540 5ac4533a9f80031ca8aaa34defe5804a 751 Gene3D G3DSA:3.40.50.300 584 735 5.1E-12 T 14-10-2018 PACID_12540 5ac4533a9f80031ca8aaa34defe5804a 751 Pfam PF13538 UvrD-like helicase C-terminal domain 683 725 6.8E-7 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain PACID_12540 5ac4533a9f80031ca8aaa34defe5804a 751 Gene3D G3DSA:3.40.50.300 485 576 6.4E-11 T 14-10-2018 PACID_12540 5ac4533a9f80031ca8aaa34defe5804a 751 SUPERFAMILY SSF52540 192 728 7.86E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_12540 5ac4533a9f80031ca8aaa34defe5804a 751 Gene3D G3DSA:3.40.50.300 189 366 6.7E-10 T 14-10-2018 PACID_12540 5ac4533a9f80031ca8aaa34defe5804a 751 Pfam PF13245 AAA domain 204 562 1.3E-14 T 14-10-2018 PACID_05560 81c2451c160afcc4d26dff00def26a3e 289 Gene3D G3DSA:1.10.10.10 20 98 2.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_05560 81c2451c160afcc4d26dff00def26a3e 289 Gene3D G3DSA:3.40.50.10490 106 279 1.9E-14 T 14-10-2018 PACID_05560 81c2451c160afcc4d26dff00def26a3e 289 SUPERFAMILY SSF46689 25 93 1.58E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_05560 81c2451c160afcc4d26dff00def26a3e 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 26 91 4.2E-12 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 PACID_05560 81c2451c160afcc4d26dff00def26a3e 289 SUPERFAMILY SSF53697 109 262 9.12E-7 T 14-10-2018 PACID_29620 d8a34491e2d93dab935c19937276aa44 409 Gene3D G3DSA:1.10.630.10 2 409 1.1E-139 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PACID_29620 d8a34491e2d93dab935c19937276aa44 409 Pfam PF00067 Cytochrome P450 276 362 1.8E-8 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PACID_29620 d8a34491e2d93dab935c19937276aa44 409 SUPERFAMILY SSF48264 9 396 1.27E-48 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 Pfam PF13361 UvrD-like helicase C-terminal domain 606 702 5.3E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 Gene3D G3DSA:3.90.320.10 772 1098 6.0E-68 T 14-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 Gene3D G3DSA:3.40.50.300 321 711 1.4E-55 T 14-10-2018 PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 4 1093 14.751 T 14-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 149 1.1E-19 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 308 1.0E-24 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 SUPERFAMILY SSF52980 782 1093 4.02E-46 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 SUPERFAMILY SSF52540 14 711 2.54E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20060 2d607e9f4fb27f668221626caa9f14a3 1100 Gene3D G3DSA:1.10.486.10 459 607 1.4E-55 T 14-10-2018 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 SUPERFAMILY SSF101821 92 205 4.21E-26 T 14-10-2018 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 Gene3D G3DSA:3.40.630.10 11 417 3.9E-139 T 14-10-2018 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 300 316 2.7E-36 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 257 275 2.7E-36 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 80 96 2.7E-36 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 389 404 2.7E-36 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 PRINTS PR00932 Aminopeptidase I zinc metalloprotease (M18) signature 113 133 2.7E-36 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 Gene3D G3DSA:2.30.250.10 90 212 3.9E-139 T 14-10-2018 IPR023358 Peptidase M18, domain 2 GO:0004177 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 SUPERFAMILY SSF53187 6 422 1.18E-91 T 14-10-2018 PACID_10500 79088f022f35189df9b4acc58364e7c3 425 Pfam PF02127 Aminopeptidase I zinc metalloprotease (M18) 15 422 1.3E-114 T 14-10-2018 IPR001948 Peptidase M18 GO:0004177|GO:0006508|GO:0008270 PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 19 312 24.318 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 Gene3D G3DSA:1.20.1640.10 104 321 1.7E-12 T 14-10-2018 PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 SUPERFAMILY SSF82866 117 312 3.92E-34 T 14-10-2018 PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 Pfam PF07549 SecD/SecF GG Motif 44 60 4.0E-6 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 47 301 8.0E-68 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 PRINTS PR01755 Bacterial translocase SecF protein signature 244 259 2.5E-17 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 PRINTS PR01755 Bacterial translocase SecF protein signature 46 61 2.5E-17 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 PRINTS PR01755 Bacterial translocase SecF protein signature 209 227 2.5E-17 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 Pfam PF02355 Protein export membrane protein 119 309 6.1E-59 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PACID_17990 c88347b4814ee87c8573258f842ef4c6 373 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 85 298 7.8E-47 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 SUPERFAMILY SSF69065 27 184 1.57E-42 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 SUPERFAMILY SSF54768 137 250 2.83E-21 T 14-10-2018 PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 41 248 4.2E-60 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 SMART SM00358 183 249 2.3E-18 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 SMART SM00535 43 176 4.2E-48 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 Pfam PF00035 Double-stranded RNA binding motif 183 248 3.7E-11 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 Hamap MF_00104 Ribonuclease 3 [rnc]. 32 245 26.417 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 Gene3D G3DSA:1.10.1520.10 30 176 1.9E-40 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 Pfam PF14622 Ribonuclease-III-like 41 166 3.9E-30 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 Gene3D G3DSA:3.30.160.20 182 250 1.1E-17 T 14-10-2018 PACID_21540 09cd01764c02b5ef3cb26acda98d6fe5 259 ProSitePatterns PS00517 Ribonuclease III family signature. 65 73 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 PACID_29080 fa97da9150d7065ef28f17551136fea1 252 Pfam PF08241 Methyltransferase domain 36 112 7.6E-9 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PACID_29080 fa97da9150d7065ef28f17551136fea1 252 SUPERFAMILY SSF53335 7 177 1.23E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_29080 fa97da9150d7065ef28f17551136fea1 252 Gene3D G3DSA:3.40.50.150 3 214 1.4E-16 T 14-10-2018 PACID_24500 90078e883339f65fe3671d3a6098261d 370 SUPERFAMILY SSF53822 61 310 1.88E-5 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_24500 90078e883339f65fe3671d3a6098261d 370 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 51 339 1.6E-43 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 PACID_24500 90078e883339f65fe3671d3a6098261d 370 PRINTS PR01733 Mycoplasma P48 major surface lipoprotein signature 4 19 1.1E-10 T 14-10-2018 IPR008107 Mycoplasma P48 major surface lipoprotein PACID_24500 90078e883339f65fe3671d3a6098261d 370 PRINTS PR01733 Mycoplasma P48 major surface lipoprotein signature 171 188 1.1E-10 T 14-10-2018 IPR008107 Mycoplasma P48 major surface lipoprotein PACID_24500 90078e883339f65fe3671d3a6098261d 370 PRINTS PR01733 Mycoplasma P48 major surface lipoprotein signature 293 309 1.1E-10 T 14-10-2018 IPR008107 Mycoplasma P48 major surface lipoprotein PACID_24500 90078e883339f65fe3671d3a6098261d 370 PRINTS PR01733 Mycoplasma P48 major surface lipoprotein signature 191 204 1.1E-10 T 14-10-2018 IPR008107 Mycoplasma P48 major surface lipoprotein PACID_24500 90078e883339f65fe3671d3a6098261d 370 Gene3D G3DSA:3.40.50.2300 153 361 1.5E-86 T 14-10-2018 PACID_24500 90078e883339f65fe3671d3a6098261d 370 Gene3D G3DSA:3.40.50.2300 52 325 1.5E-86 T 14-10-2018 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Pfam PF02810 SEC-C motif 902 920 1.0E-8 T 14-10-2018 IPR004027 SEC-C motif PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Gene3D G3DSA:3.40.50.300 397 614 2.6E-91 T 14-10-2018 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Gene3D G3DSA:1.10.3060.10 616 823 1.0E-71 T 14-10-2018 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 ProSitePatterns PS01312 SecA family signature. 480 495 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Gene3D G3DSA:3.40.50.300 20 395 1.4E-170 T 14-10-2018 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Gene3D G3DSA:3.90.1440.10 227 348 1.4E-170 T 14-10-2018 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 SMART SM00958 226 338 6.1E-60 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Pfam PF07517 SecA DEAD-like domain 8 382 2.7E-121 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Pfam PF01043 SecA preprotein cross-linking domain 230 338 1.2E-34 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 822 19.101 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 806 0.0 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 SUPERFAMILY SSF52540 397 613 1.63E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Pfam PF07516 SecA Wing and Scaffold domain 612 819 1.3E-65 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 PRINTS PR00906 SecA protein signature 393 406 2.1E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 PRINTS PR00906 SecA protein signature 168 188 2.1E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 PRINTS PR00906 SecA protein signature 115 125 2.1E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 PRINTS PR00906 SecA protein signature 61 85 2.1E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 PRINTS PR00906 SecA protein signature 356 373 2.1E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 PRINTS PR00906 SecA protein signature 319 341 2.1E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 PRINTS PR00906 SecA protein signature 99 113 2.1E-65 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 SUPERFAMILY SSF81767 225 348 1.22E-42 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 SUPERFAMILY SSF52540 9 395 4.43E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 SUPERFAMILY SSF81886 615 910 5.75E-72 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 Gene3D G3DSA:3.10.450.50 861 921 4.9E-8 T 14-10-2018 PACID_20210 29803fc5781a1a5d2e0933b09337691a 923 SMART SM00957 4 382 1.1E-255 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 PACID_15110 e8a44ee75afdcf4e061e968a57fa3997 316 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 PACID_15110 e8a44ee75afdcf4e061e968a57fa3997 316 SUPERFAMILY SSF51395 3 301 1.16E-82 T 14-10-2018 PACID_15110 e8a44ee75afdcf4e061e968a57fa3997 316 PIRSF PIRSF000164 1 301 1.8E-77 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 PACID_15110 e8a44ee75afdcf4e061e968a57fa3997 316 Pfam PF01180 Dihydroorotate dehydrogenase 4 288 1.4E-88 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PACID_15110 e8a44ee75afdcf4e061e968a57fa3997 316 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 299 5.8E-110 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PACID_15110 e8a44ee75afdcf4e061e968a57fa3997 316 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 303 40.239 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 PACID_15110 e8a44ee75afdcf4e061e968a57fa3997 316 Gene3D G3DSA:3.20.20.70 1 307 1.8E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_15110 e8a44ee75afdcf4e061e968a57fa3997 316 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 241 261 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 Pfam PF12161 HsdM N-terminal domain 8 123 1.1E-14 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 Gene3D G3DSA:3.40.50.150 157 438 3.9E-77 T 14-10-2018 PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 SUPERFAMILY SSF53335 6 489 4.8E-125 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 187 201 5.9E-21 T 14-10-2018 PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 293 317 5.9E-21 T 14-10-2018 PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 159 175 5.9E-21 T 14-10-2018 PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 258 270 5.9E-21 T 14-10-2018 PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 Pfam PF02384 N-6 DNA Methylase 136 443 6.9E-98 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 Gene3D G3DSA:1.20.1260.30 1 53 3.6E-16 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 Gene3D G3DSA:1.20.1260.30 54 153 1.3E-8 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PACID_17420 a20b36199f5fb59aadc277124e8b7569 813 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 261 267 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PACID_12360 a6abf6438867ef393dc9cf31c72cb1ab 214 Gene3D G3DSA:1.20.1540.10 14 191 3.6E-18 T 14-10-2018 IPR035952 Rhomboid-like superfamily PACID_12360 a6abf6438867ef393dc9cf31c72cb1ab 214 SUPERFAMILY SSF144091 21 188 7.46E-23 T 14-10-2018 PACID_12360 a6abf6438867ef393dc9cf31c72cb1ab 214 Pfam PF01694 Rhomboid family 52 185 6.3E-15 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 299 1.7E-79 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 1 461 26.401 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 14 27 1.6E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 1.6E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 1.6E-8 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 459 5.9E-119 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 Gene3D G3DSA:1.10.10.350 366 465 5.3E-25 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 Gene3D G3DSA:3.40.50.620 1 308 2.6E-112 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 SUPERFAMILY SSF48163 293 460 4.84E-37 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 PACID_25780 3cfed28ad52a9135f93714dfeabef6e3 466 SUPERFAMILY SSF52374 2 287 1.16E-83 T 14-10-2018 PACID_00810 c7f8168c562d637691e38eb3ecea0835 269 SMART SM00382 40 224 9.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_00810 c7f8168c562d637691e38eb3ecea0835 269 Pfam PF00005 ABC transporter 33 179 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_00810 c7f8168c562d637691e38eb3ecea0835 269 SUPERFAMILY SSF52540 16 237 9.87E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_00810 c7f8168c562d637691e38eb3ecea0835 269 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_00810 c7f8168c562d637691e38eb3ecea0835 269 Gene3D G3DSA:3.40.50.300 8 260 4.1E-63 T 14-10-2018 PACID_07840 4d973891dff20293225fca2df3f84ffd 389 Pfam PF13439 Glycosyltransferase Family 4 25 185 8.1E-10 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_07840 4d973891dff20293225fca2df3f84ffd 389 Gene3D G3DSA:3.40.50.2000 197 366 5.6E-28 T 14-10-2018 PACID_07840 4d973891dff20293225fca2df3f84ffd 389 Gene3D G3DSA:3.40.50.2000 20 194 6.6E-8 T 14-10-2018 PACID_07840 4d973891dff20293225fca2df3f84ffd 389 SUPERFAMILY SSF53756 15 377 2.83E-48 T 14-10-2018 PACID_07840 4d973891dff20293225fca2df3f84ffd 389 Pfam PF13692 Glycosyl transferases group 1 203 343 6.6E-21 T 14-10-2018 PACID_32400 43cabd22ceaa8b685f796caab133ea2e 657 Gene3D G3DSA:3.40.50.12780 363 496 3.3E-39 T 14-10-2018 PACID_32400 43cabd22ceaa8b685f796caab133ea2e 657 SUPERFAMILY SSF56801 34 632 7.72E-126 T 14-10-2018 PACID_32400 43cabd22ceaa8b685f796caab133ea2e 657 ProSitePatterns PS00455 Putative AMP-binding domain signature. 222 233 - T 14-10-2018 IPR020845 AMP-binding, conserved site PACID_32400 43cabd22ceaa8b685f796caab133ea2e 657 Gene3D G3DSA:3.30.300.30 499 632 1.4E-5 T 14-10-2018 PACID_32400 43cabd22ceaa8b685f796caab133ea2e 657 Pfam PF00501 AMP-binding enzyme 41 502 3.9E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PACID_32400 43cabd22ceaa8b685f796caab133ea2e 657 Gene3D G3DSA:3.40.50.12780 26 360 1.2E-59 T 14-10-2018 PACID_17620 463574526baa0af8acdb6aeaac48c79a 142 Pfam PF01850 PIN domain 14 129 9.6E-10 T 14-10-2018 IPR002716 PIN domain PACID_17620 463574526baa0af8acdb6aeaac48c79a 142 SUPERFAMILY SSF88723 10 132 5.61E-18 T 14-10-2018 IPR029060 PIN-like domain superfamily PACID_17620 463574526baa0af8acdb6aeaac48c79a 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 11 135 9.629 T 14-10-2018 IPR022907 VapC family GO:0004540 PACID_17620 463574526baa0af8acdb6aeaac48c79a 142 Gene3D G3DSA:3.40.50.1010 10 137 7.2E-27 T 14-10-2018 PACID_01380 93605d32300c2b6cfe5e0a27f4953a5d 97 Pfam PF01909 Nucleotidyltransferase domain 11 91 9.9E-13 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PACID_01380 93605d32300c2b6cfe5e0a27f4953a5d 97 Gene3D G3DSA:3.30.460.10 2 94 2.3E-23 T 14-10-2018 PACID_01380 93605d32300c2b6cfe5e0a27f4953a5d 97 SUPERFAMILY SSF81301 11 95 1.61E-20 T 14-10-2018 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 2 541 8.3E-259 T 14-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 SUPERFAMILY SSF53738 206 313 1.41E-6 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 SUPERFAMILY SSF53738 303 445 4.71E-31 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 479 535 2.4E-7 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 SUPERFAMILY SSF55957 430 542 3.92E-18 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 Gene3D G3DSA:3.40.120.10 218 315 9.1E-43 T 14-10-2018 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 Gene3D G3DSA:3.40.120.10 16 217 9.6E-65 T 14-10-2018 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 Gene3D G3DSA:3.40.120.10 316 440 5.5E-34 T 14-10-2018 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 207 312 7.6E-13 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 4.0E-31 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 318 437 2.3E-27 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 Gene3D G3DSA:3.30.310.50 441 542 6.5E-32 T 14-10-2018 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 SUPERFAMILY SSF53738 24 232 6.59E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_19220 848ab2c4ab07334adba71477f3a45b31 542 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_17740 6e22d1f9e1d49838be9f5aca4d9ea605 362 Gene3D G3DSA:1.20.1090.10 164 356 2.6E-56 T 14-10-2018 PACID_17740 6e22d1f9e1d49838be9f5aca4d9ea605 362 Pfam PF01761 3-dehydroquinate synthase 58 320 3.2E-85 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PACID_17740 6e22d1f9e1d49838be9f5aca4d9ea605 362 SUPERFAMILY SSF56796 3 352 4.97E-91 T 14-10-2018 PACID_17740 6e22d1f9e1d49838be9f5aca4d9ea605 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 1.1E-92 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PACID_17740 6e22d1f9e1d49838be9f5aca4d9ea605 362 Gene3D G3DSA:3.40.50.1970 1 163 7.1E-51 T 14-10-2018 PACID_17740 6e22d1f9e1d49838be9f5aca4d9ea605 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 351 58.253 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PACID_17740 6e22d1f9e1d49838be9f5aca4d9ea605 362 PIRSF PIRSF001455 5 355 1.3E-85 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 PACID_06890 d7f29083fa6ddcb7ed67b25f2431af1a 380 SUPERFAMILY SSF46785 7 70 8.06E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_06890 d7f29083fa6ddcb7ed67b25f2431af1a 380 SUPERFAMILY SSF53067 77 362 8.64E-33 T 14-10-2018 PACID_06890 d7f29083fa6ddcb7ed67b25f2431af1a 380 Gene3D G3DSA:3.30.420.40 71 175 3.5E-13 T 14-10-2018 PACID_06890 d7f29083fa6ddcb7ed67b25f2431af1a 380 Gene3D G3DSA:3.30.420.40 176 363 8.0E-24 T 14-10-2018 PACID_06890 d7f29083fa6ddcb7ed67b25f2431af1a 380 Gene3D G3DSA:1.10.10.10 12 70 1.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_06890 d7f29083fa6ddcb7ed67b25f2431af1a 380 Pfam PF00480 ROK family 79 313 1.4E-21 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PACID_03610 941ae4665a89d1da2f4d5e8d6067ed7e 324 SUPERFAMILY SSF53850 42 324 1.34E-58 T 14-10-2018 PACID_03610 941ae4665a89d1da2f4d5e8d6067ed7e 324 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 46 313 7.1E-53 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PACID_03610 941ae4665a89d1da2f4d5e8d6067ed7e 324 Gene3D G3DSA:3.40.190.100 130 257 3.4E-58 T 14-10-2018 PACID_03610 941ae4665a89d1da2f4d5e8d6067ed7e 324 Gene3D G3DSA:3.40.190.10 42 324 3.4E-58 T 14-10-2018 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 Pfam PF00557 Metallopeptidase family M24 46 273 1.0E-49 T 14-10-2018 IPR000994 Peptidase M24 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 Hamap MF_01974 Methionine aminopeptidase [map]. 37 283 37.059 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 39 282 1.2E-81 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 SUPERFAMILY SSF55920 8 283 3.53E-80 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 Gene3D G3DSA:3.90.230.10 3 283 2.3E-109 T 14-10-2018 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 200 218 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 PRINTS PR00599 Methionine aminopeptidase-1 signature 102 115 3.2E-19 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 PRINTS PR00599 Methionine aminopeptidase-1 signature 194 206 3.2E-19 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 PRINTS PR00599 Methionine aminopeptidase-1 signature 225 237 3.2E-19 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_11910 67c310ccfcb53bd702ab0f210d47f3ca 284 PRINTS PR00599 Methionine aminopeptidase-1 signature 124 140 3.2E-19 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_08800 5582beb53fc6a34fb3333719ec05fedb 484 Gene3D G3DSA:3.40.50.880 253 426 2.7E-23 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_08800 5582beb53fc6a34fb3333719ec05fedb 484 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 4 478 1.1E-133 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 PACID_08800 5582beb53fc6a34fb3333719ec05fedb 484 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 4 229 9.7E-21 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PACID_08800 5582beb53fc6a34fb3333719ec05fedb 484 Gene3D G3DSA:3.40.50.300 2 232 1.9E-49 T 14-10-2018 PACID_08800 5582beb53fc6a34fb3333719ec05fedb 484 SUPERFAMILY SSF52317 256 436 3.82E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_08800 5582beb53fc6a34fb3333719ec05fedb 484 SUPERFAMILY SSF52540 1 235 5.8E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_08800 5582beb53fc6a34fb3333719ec05fedb 484 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 255 429 1.1E-41 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 PACID_08800 5582beb53fc6a34fb3333719ec05fedb 484 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 484 166.167 T 14-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 SUPERFAMILY SSF81333 13 71 1.44E-15 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 PRINTS PR00124 ATP synthase C subunit signature 31 46 1.7E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 PRINTS PR00124 ATP synthase C subunit signature 48 73 1.7E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 PRINTS PR00124 ATP synthase C subunit signature 10 29 1.7E-15 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 Hamap MF_01396 ATP synthase subunit c [atpH]. 8 73 13.733 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 Pfam PF00137 ATP synthase subunit C 13 71 4.0E-12 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 Gene3D G3DSA:1.20.20.10 9 73 2.3E-18 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 ProSitePatterns PS00605 ATP synthase c subunit signature. 38 59 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19400 b9e9c05669ed16efed05b55eb0a184ea 73 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 70 2.2E-13 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 Gene3D G3DSA:3.90.960.10 241 405 3.9E-207 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 SUPERFAMILY SSF52954 479 583 1.31E-26 T 14-10-2018 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 Gene3D G3DSA:3.40.50.800 5 567 3.9E-207 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 Gene3D G3DSA:3.30.930.10 13 481 3.9E-207 T 14-10-2018 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 SUPERFAMILY SSF55826 254 428 4.06E-11 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 96 473 2.1E-41 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 Pfam PF03129 Anticodon binding domain 492 580 2.5E-15 T 14-10-2018 IPR004154 Anticodon-binding PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 SUPERFAMILY SSF55681 12 494 1.05E-86 T 14-10-2018 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 146 157 5.3E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 106 117 5.3E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 136 144 5.3E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 PRINTS PR01046 Prolyl-tRNA synthetase signature 70 88 5.3E-16 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 4 576 4.6E-166 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 Pfam PF04073 Aminoacyl-tRNA editing domain 258 395 6.0E-24 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PACID_21900 237b500d84ff85381ea71dca2319a8ec 585 Hamap MF_01569 Proline--tRNA ligase [proS]. 3 584 36.483 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 PACID_17210 dce34f5724c93feb668d0510c1809f86 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 3.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_17210 dce34f5724c93feb668d0510c1809f86 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 124 144 3.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_17210 dce34f5724c93feb668d0510c1809f86 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 3.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_17210 dce34f5724c93feb668d0510c1809f86 166 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 3.8E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_17210 dce34f5724c93feb668d0510c1809f86 166 Pfam PF12802 MarR family 38 97 4.1E-8 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_17210 dce34f5724c93feb668d0510c1809f86 166 Gene3D G3DSA:1.10.10.10 8 154 7.6E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_17210 dce34f5724c93feb668d0510c1809f86 166 SMART SM00347 32 134 1.2E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_17210 dce34f5724c93feb668d0510c1809f86 166 SUPERFAMILY SSF46785 11 148 3.16E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Gene3D G3DSA:3.30.420.40 86 204 3.7E-26 T 14-10-2018 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Pfam PF00480 ROK family 124 243 8.1E-14 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Pfam PF09339 IclR helix-turn-helix domain 16 58 9.0E-6 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Gene3D G3DSA:3.30.420.40 252 337 1.8E-5 T 14-10-2018 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 SUPERFAMILY SSF53067 81 335 1.01E-20 T 14-10-2018 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 382 504 2.0E-14 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 SUPERFAMILY SSF55347 512 689 2.18E-26 T 14-10-2018 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 516 607 1.4E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Gene3D G3DSA:3.40.50.720 378 514 9.0E-24 T 14-10-2018 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 SUPERFAMILY SSF46785 15 74 3.5E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Gene3D G3DSA:3.30.420.40 205 244 3.7E-26 T 14-10-2018 PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Gene3D G3DSA:1.10.10.10 3 76 2.2E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 SUPERFAMILY SSF51735 368 532 1.79E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_08610 46f37654e5aca09d3883dceb6d184dd0 771 Gene3D G3DSA:3.30.360.10 515 752 4.3E-35 T 14-10-2018 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 Pfam PF02637 GatB domain 354 501 7.7E-41 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 Pfam PF02934 GatB/GatE catalytic domain 22 316 5.2E-103 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 18 502 34.99 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 Gene3D G3DSA:1.10.150.380 324 439 8.9E-17 T 14-10-2018 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 SMART SM00845 354 501 1.9E-62 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 167 181 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 SUPERFAMILY SSF89095 353 502 1.83E-25 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 Gene3D G3DSA:1.10.10.410 441 502 4.3E-18 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 SUPERFAMILY SSF55931 21 323 3.07E-108 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PACID_18980 219f8e4e87989f1e1ee10a01703769dc 502 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 17 501 4.3E-147 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 PACID_07290 3006c184cfb4c563b0d43c3d977691dc 324 Gene3D G3DSA:3.40.50.2300 56 301 2.3E-75 T 14-10-2018 PACID_07290 3006c184cfb4c563b0d43c3d977691dc 324 Gene3D G3DSA:3.40.50.2300 159 286 2.3E-75 T 14-10-2018 PACID_07290 3006c184cfb4c563b0d43c3d977691dc 324 SUPERFAMILY SSF47413 1 59 1.78E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_07290 3006c184cfb4c563b0d43c3d977691dc 324 Pfam PF13377 Periplasmic binding protein-like domain 167 322 7.9E-37 T 14-10-2018 PACID_07290 3006c184cfb4c563b0d43c3d977691dc 324 Gene3D G3DSA:1.10.260.40 1 55 2.2E-22 T 14-10-2018 PACID_07290 3006c184cfb4c563b0d43c3d977691dc 324 SMART SM00354 1 71 1.3E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_07290 3006c184cfb4c563b0d43c3d977691dc 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 6.4E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_07290 3006c184cfb4c563b0d43c3d977691dc 324 SUPERFAMILY SSF53822 61 323 9.23E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_12890 f21d43d484677200981cca66ff3f28df 261 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 253 9.8E-62 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase PACID_12890 f21d43d484677200981cca66ff3f28df 261 Gene3D G3DSA:3.60.140.10 2 257 7.4E-68 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily PACID_12890 f21d43d484677200981cca66ff3f28df 261 SUPERFAMILY SSF64438 6 254 4.58E-63 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic PACID_26090 26ffaa014d8c6023f44ac326f5d92763 296 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 293 3.7E-57 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 PACID_26090 26ffaa014d8c6023f44ac326f5d92763 296 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 286 1.1E-19 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase PACID_26090 26ffaa014d8c6023f44ac326f5d92763 296 Gene3D G3DSA:3.60.10.10 1 295 6.6E-68 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PACID_26090 26ffaa014d8c6023f44ac326f5d92763 296 SUPERFAMILY SSF56219 1 294 1.31E-62 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily PACID_33500 afb82f51e81d774aeb936ab3a69feb2f 320 Gene3D G3DSA:3.40.50.300 1 234 1.8E-54 T 14-10-2018 PACID_33500 afb82f51e81d774aeb936ab3a69feb2f 320 SUPERFAMILY SSF52540 6 223 8.04E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_33500 afb82f51e81d774aeb936ab3a69feb2f 320 SMART SM00382 32 218 2.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_33500 afb82f51e81d774aeb936ab3a69feb2f 320 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_33500 afb82f51e81d774aeb936ab3a69feb2f 320 Pfam PF00005 ABC transporter 23 162 2.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_01970 7a672befc651396d2cffe0809966d9b8 397 Gene3D G3DSA:3.40.50.2000 187 360 7.9E-70 T 14-10-2018 PACID_01970 7a672befc651396d2cffe0809966d9b8 397 Pfam PF13439 Glycosyltransferase Family 4 14 190 1.9E-23 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_01970 7a672befc651396d2cffe0809966d9b8 397 SUPERFAMILY SSF53756 2 378 1.71E-74 T 14-10-2018 PACID_01970 7a672befc651396d2cffe0809966d9b8 397 Pfam PF00534 Glycosyl transferases group 1 197 355 3.1E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_01970 7a672befc651396d2cffe0809966d9b8 397 Gene3D G3DSA:3.40.50.2000 14 186 7.9E-70 T 14-10-2018 PACID_05280 30fd5489fb8b82736f965fdbd6989fa0 358 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 13 340 6.7E-101 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PACID_05280 30fd5489fb8b82736f965fdbd6989fa0 358 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 9 350 1.5E-91 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PACID_05280 30fd5489fb8b82736f965fdbd6989fa0 358 PIRSF PIRSF000267 7 354 3.2E-119 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 PACID_07070 48668f9c2243b8f952b68ade8649a8c5 384 Pfam PF01384 Phosphate transporter family 22 318 1.8E-74 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 PACID_33470 e8e21a3c1947223b779716df73b3fc67 228 Pfam PF05076 Suppressor of fused protein (SUFU) 65 225 4.3E-25 T 14-10-2018 IPR020941 Suppressor of fused-like domain Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5610787|Reactome: R-HSA-5632684 PACID_33470 e8e21a3c1947223b779716df73b3fc67 228 ProDom PD105609 PLASMID YQCF RSP1132 50 227 9.0E-64 T 14-10-2018 PACID_21750 6cf1b01c4d837cbdf024803b402c0925 167 PIRSF PIRSF011474 1 152 1.2E-46 T 14-10-2018 IPR009693 Glucitol operon activator PACID_21750 6cf1b01c4d837cbdf024803b402c0925 167 Pfam PF06923 Glucitol operon activator protein (GutM) 5 105 1.4E-30 T 14-10-2018 IPR009693 Glucitol operon activator PACID_04980 ed60b3000fcc6782077962a81882eab9 848 PIRSF PIRSF005496 6 848 3.6E-229 T 14-10-2018 PACID_04980 ed60b3000fcc6782077962a81882eab9 848 Pfam PF00270 DEAD/DEAH box helicase 21 163 2.7E-6 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_04980 ed60b3000fcc6782077962a81882eab9 848 Gene3D G3DSA:1.20.120.1080 400 484 2.5E-10 T 14-10-2018 PACID_04980 ed60b3000fcc6782077962a81882eab9 848 SMART SM00490 252 353 1.4E-13 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_04980 ed60b3000fcc6782077962a81882eab9 848 Gene3D G3DSA:3.40.50.300 192 372 1.3E-35 T 14-10-2018 PACID_04980 ed60b3000fcc6782077962a81882eab9 848 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 11 846 7.0E-182 T 14-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 PACID_04980 ed60b3000fcc6782077962a81882eab9 848 Pfam PF00271 Helicase conserved C-terminal domain 233 353 4.4E-12 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_04980 ed60b3000fcc6782077962a81882eab9 848 Pfam PF04408 Helicase associated domain (HA2) 414 477 8.0E-9 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 PACID_04980 ed60b3000fcc6782077962a81882eab9 848 SMART SM00847 413 504 1.7E-9 T 14-10-2018 IPR007502 Helicase-associated domain GO:0004386 PACID_04980 ed60b3000fcc6782077962a81882eab9 848 SUPERFAMILY SSF52540 22 361 2.53E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_04980 ed60b3000fcc6782077962a81882eab9 848 SMART SM00487 8 197 7.1E-13 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_04980 ed60b3000fcc6782077962a81882eab9 848 Pfam PF08482 ATP-dependent helicase C-terminal 699 834 1.6E-46 T 14-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal PACID_04980 ed60b3000fcc6782077962a81882eab9 848 Gene3D G3DSA:3.40.50.300 3 189 3.2E-47 T 14-10-2018 PACID_24420 11892dcd087c7a7d51f9181829916679 374 PIRSF PIRSF029792 35 374 4.2E-106 T 14-10-2018 IPR008794 Proline racemase family PACID_24420 11892dcd087c7a7d51f9181829916679 374 SUPERFAMILY SSF54506 38 372 3.5E-89 T 14-10-2018 PACID_24420 11892dcd087c7a7d51f9181829916679 374 Pfam PF05544 Proline racemase 42 372 1.6E-97 T 14-10-2018 IPR008794 Proline racemase family PACID_24420 11892dcd087c7a7d51f9181829916679 374 Gene3D G3DSA:3.10.310.10 40 374 1.3E-112 T 14-10-2018 PACID_24420 11892dcd087c7a7d51f9181829916679 374 Gene3D G3DSA:3.10.310.10 186 351 1.3E-112 T 14-10-2018 PACID_25690 53064ca0ae321628818e8628701435ca 139 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 38.98 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25690 53064ca0ae321628818e8628701435ca 139 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 5.0E-48 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 PACID_25690 53064ca0ae321628818e8628701435ca 139 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.0E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25690 53064ca0ae321628818e8628701435ca 139 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.0E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25690 53064ca0ae321628818e8628701435ca 139 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.0E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25690 53064ca0ae321628818e8628701435ca 139 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.0E-39 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25690 53064ca0ae321628818e8628701435ca 139 Gene3D G3DSA:3.90.1170.10 1 139 8.2E-50 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25690 53064ca0ae321628818e8628701435ca 139 SUPERFAMILY SSF54686 1 136 1.96E-55 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25690 53064ca0ae321628818e8628701435ca 139 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.3E-56 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25690 53064ca0ae321628818e8628701435ca 139 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25690 53064ca0ae321628818e8628701435ca 139 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_06860 b7cd14810a64191f5104dc602e4c21ec 244 PIRSF PIRSF006648 2 244 2.0E-19 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_06860 b7cd14810a64191f5104dc602e4c21ec 244 Pfam PF01061 ABC-2 type transporter 24 204 2.3E-33 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PACID_02740 e0bdf7a277202421084e6a46708d9194 241 Pfam PF12802 MarR family 16 74 5.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_02740 e0bdf7a277202421084e6a46708d9194 241 Gene3D G3DSA:1.10.10.10 6 77 2.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_02740 e0bdf7a277202421084e6a46708d9194 241 SUPERFAMILY SSF46785 23 206 6.83E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_04040 0faad3fa9d787c1912c65350efe487e3 170 SUPERFAMILY SSF53098 11 158 4.7E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_04040 0faad3fa9d787c1912c65350efe487e3 170 Gene3D G3DSA:3.30.420.10 10 165 1.3E-12 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_04040 0faad3fa9d787c1912c65350efe487e3 170 Pfam PF00665 Integrase core domain 11 117 7.3E-26 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_12470 ee8a3e7b299de8f9f20c6489594bc542 215 Pfam PF13483 Beta-lactamase superfamily domain 2 168 6.0E-20 T 14-10-2018 PACID_12470 ee8a3e7b299de8f9f20c6489594bc542 215 SUPERFAMILY SSF56281 1 186 4.98E-23 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_12470 ee8a3e7b299de8f9f20c6489594bc542 215 SMART SM00849 7 171 0.0082 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_12470 ee8a3e7b299de8f9f20c6489594bc542 215 Gene3D G3DSA:3.60.15.10 1 192 1.3E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 SUPERFAMILY SSF49303 215 312 2.19E-12 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 440 454 - T 14-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Pfam PF16353 Domain of unknown function(DUF4981) 628 715 4.6E-13 T 14-10-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Gene3D G3DSA:2.60.120.260 3 213 1.3E-74 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 SUPERFAMILY SSF74650 739 1019 1.11E-77 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Gene3D G3DSA:3.20.20.80 313 613 5.6E-99 T 14-10-2018 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Pfam PF02929 Beta galactosidase small chain 751 1017 1.5E-67 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Pfam PF00703 Glycosyl hydrolases family 2 215 311 1.4E-7 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 363 388 - T 14-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 313 615 2.0E-84 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 SMART SM01038 748 1018 6.9E-90 T 14-10-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Gene3D G3DSA:2.60.40.10 214 311 9.6E-10 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Gene3D G3DSA:2.60.40.10 616 720 2.6E-11 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Gene3D G3DSA:2.70.98.10 734 1019 6.3E-78 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 SUPERFAMILY SSF51445 313 612 1.86E-79 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 SUPERFAMILY SSF49785 10 212 1.7E-59 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 SUPERFAMILY SSF49303 610 716 2.81E-9 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 PRINTS PR00132 Glycosyl hydrolase family 2 signature 140 155 1.7E-28 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 PRINTS PR00132 Glycosyl hydrolase family 2 signature 440 455 1.7E-28 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 PRINTS PR00132 Glycosyl hydrolase family 2 signature 322 336 1.7E-28 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 PRINTS PR00132 Glycosyl hydrolase family 2 signature 353 371 1.7E-28 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 PRINTS PR00132 Glycosyl hydrolase family 2 signature 519 534 1.7E-28 T 14-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_03910 e0f5c53b813896b91f16aa62d43b009f 1022 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 46 212 1.2E-41 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 17 140 2.1E-12 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 Gene3D G3DSA:1.20.272.10 231 335 1.1E-46 T 14-10-2018 PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 Pfam PF12002 MgsA AAA+ ATPase C terminal 258 423 1.4E-64 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 Gene3D G3DSA:1.10.3710.10 336 433 5.8E-28 T 14-10-2018 PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 Gene3D G3DSA:3.40.50.300 7 166 4.7E-42 T 14-10-2018 PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 Pfam PF16193 AAA C-terminal domain 186 257 3.6E-21 T 14-10-2018 IPR032423 AAA C-terminal domain PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 SUPERFAMILY SSF48019 243 426 3.51E-71 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 SMART SM00382 51 167 2.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_04200 3a437a14438952d5d98d67f2eb93e832 434 SUPERFAMILY SSF52540 13 220 2.41E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25050 e82c6c771ddac2ee800d316d24e338b3 295 Gene3D G3DSA:3.40.50.300 126 268 3.3E-33 T 14-10-2018 PACID_25050 e82c6c771ddac2ee800d316d24e338b3 295 SUPERFAMILY SSF52540 147 249 3.22E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25050 e82c6c771ddac2ee800d316d24e338b3 295 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 133 253 8.7E-29 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PACID_25050 e82c6c771ddac2ee800d316d24e338b3 295 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 132 255 3.3E-23 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 SUPERFAMILY SSF51246 332 448 7.32E-36 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 SMART SM00878 337 447 6.3E-52 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 Gene3D G3DSA:2.40.50.100 520 587 1.7E-19 T 14-10-2018 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 7.9E-42 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 SUPERFAMILY SSF56059 86 334 6.89E-58 T 14-10-2018 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 Gene3D G3DSA:3.30.470.130 1 452 2.4E-172 T 14-10-2018 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 SUPERFAMILY SSF51230 513 587 6.15E-19 T 14-10-2018 IPR011053 Single hybrid motif PACID_24270 d2be696f595895a9b685df5cc26710f7 591 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 325 1.7E-70 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 Pfam PF00364 Biotin-requiring enzyme 522 587 2.9E-15 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PACID_24270 d2be696f595895a9b685df5cc26710f7 591 SUPERFAMILY SSF52440 4 116 2.45E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PACID_24270 d2be696f595895a9b685df5cc26710f7 591 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 544 561 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_24270 d2be696f595895a9b685df5cc26710f7 591 Pfam PF02785 Biotin carboxylase C-terminal domain 337 447 1.2E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_07970 1fbac374ec5ad0c0332ff2ad0ecdbcb2 497 SUPERFAMILY SSF51569 3 290 1.5E-87 T 14-10-2018 PACID_07970 1fbac374ec5ad0c0332ff2ad0ecdbcb2 497 SUPERFAMILY SSF89000 298 459 3.61E-52 T 14-10-2018 PACID_07970 1fbac374ec5ad0c0332ff2ad0ecdbcb2 497 Pfam PF00682 HMGL-like 8 271 9.1E-47 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PACID_07970 1fbac374ec5ad0c0332ff2ad0ecdbcb2 497 Pfam PF02436 Conserved carboxylase domain 293 485 1.9E-52 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 PACID_07970 1fbac374ec5ad0c0332ff2ad0ecdbcb2 497 Gene3D G3DSA:3.20.20.70 1 460 1.5E-162 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 7.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 7.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 7.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 7.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 7.3E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 261 1.3E-54 T 14-10-2018 PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 SUPERFAMILY SSF51735 7 263 8.47E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 Gene3D G3DSA:3.40.50.720 1 265 2.4E-73 T 14-10-2018 PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 9.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 9.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29660 6c2ff94091d0980085fe6a852bd57e3b 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.2E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 16 199 1.3E-15 T 14-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 Gene3D G3DSA:3.40.50.300 15 198 3.3E-21 T 14-10-2018 PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 Gene3D G3DSA:3.40.50.880 318 486 2.8E-11 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 SUPERFAMILY SSF52540 14 209 1.79E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 SUPERFAMILY SSF52317 312 513 1.9E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 318 503 2.8E-23 T 14-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 SUPERFAMILY SSF53383 540 865 3.35E-60 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 722 735 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 Pfam PF00155 Aminotransferase class I and II 549 861 1.6E-26 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 Gene3D G3DSA:3.90.1150.10 546 863 4.8E-80 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 Gene3D G3DSA:3.40.640.10 558 770 4.8E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_08930 16e360fc6485a17aefa1ad31529240e0 878 Hamap MF_00027 Hydrogenobyrinate a,c-diamide synthase [cobB]. 13 505 39.036 T 14-10-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 PACID_12510 d2ba8c492a5ce21bcaded87ab5a60494 229 SUPERFAMILY SSF51391 9 212 4.45E-33 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PACID_12510 d2ba8c492a5ce21bcaded87ab5a60494 229 Pfam PF02581 Thiamine monophosphate synthase 16 196 8.4E-29 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PACID_12510 d2ba8c492a5ce21bcaded87ab5a60494 229 Gene3D G3DSA:3.20.20.70 7 215 1.5E-40 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_08070 5e9a02c3f27c98088140fe34e4b31b1b 224 Pfam PF00072 Response regulator receiver domain 4 113 1.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_08070 5e9a02c3f27c98088140fe34e4b31b1b 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 223 1.4E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_08070 5e9a02c3f27c98088140fe34e4b31b1b 224 SMART SM00862 147 223 2.4E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_08070 5e9a02c3f27c98088140fe34e4b31b1b 224 SUPERFAMILY SSF52172 1 121 1.24E-40 T 14-10-2018 IPR011006 CheY-like superfamily PACID_08070 5e9a02c3f27c98088140fe34e4b31b1b 224 SMART SM00448 2 112 2.6E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_08070 5e9a02c3f27c98088140fe34e4b31b1b 224 SUPERFAMILY SSF46894 126 223 2.83E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_08070 5e9a02c3f27c98088140fe34e4b31b1b 224 Gene3D G3DSA:1.10.10.10 122 224 5.5E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_08070 5e9a02c3f27c98088140fe34e4b31b1b 224 Gene3D G3DSA:3.40.50.2300 1 121 2.6E-36 T 14-10-2018 PACID_10450 ef918f0596bcdbec7b1e7883879ce3d8 454 Gene3D G3DSA:3.40.50.1010 21 167 4.5E-18 T 14-10-2018 PACID_10450 ef918f0596bcdbec7b1e7883879ce3d8 454 Pfam PF13638 PIN domain 25 163 4.2E-28 T 14-10-2018 IPR002716 PIN domain PACID_10450 ef918f0596bcdbec7b1e7883879ce3d8 454 Pfam PF02562 PhoH-like protein 245 449 1.5E-53 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 PACID_10450 ef918f0596bcdbec7b1e7883879ce3d8 454 Gene3D G3DSA:3.40.50.300 243 451 2.1E-51 T 14-10-2018 PACID_10450 ef918f0596bcdbec7b1e7883879ce3d8 454 SMART SM00670 23 150 1.4E-11 T 14-10-2018 IPR002716 PIN domain PACID_10450 ef918f0596bcdbec7b1e7883879ce3d8 454 SUPERFAMILY SSF88723 24 162 5.4E-10 T 14-10-2018 IPR029060 PIN-like domain superfamily PACID_10450 ef918f0596bcdbec7b1e7883879ce3d8 454 SUPERFAMILY SSF52540 244 422 3.01E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 Pfam PF01266 FAD dependent oxidoreductase 28 391 2.4E-47 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 Gene3D G3DSA:3.50.50.60 28 399 7.5E-119 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 Gene3D G3DSA:3.30.9.10 106 352 7.5E-119 T 14-10-2018 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 SUPERFAMILY SSF54373 260 351 4.32E-7 T 14-10-2018 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 56 68 1.7E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 39 1.7E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 380 392 1.7E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 40 50 1.7E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 102 114 1.7E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 351 1.7E-30 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 32 49 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 SUPERFAMILY SSF51905 23 247 7.77E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 385 395 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 Gene3D G3DSA:1.10.8.870 424 566 3.8E-29 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_27900 0a07d1cdd4298dd71ac8d02621db9281 586 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 414 538 3.9E-28 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_17880 2dffe38b0637184be7dbc6ef621f91fc 290 Gene3D G3DSA:3.40.50.1820 4 287 1.3E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_17880 2dffe38b0637184be7dbc6ef621f91fc 290 Pfam PF12697 Alpha/beta hydrolase family 46 270 5.3E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_17880 2dffe38b0637184be7dbc6ef621f91fc 290 SUPERFAMILY SSF53474 31 252 3.07E-18 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 417 5.0E-22 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 SUPERFAMILY SSF52440 3 104 3.84E-33 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 SMART SM01209 104 290 2.6E-113 T 14-10-2018 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 SMART SM01210 326 420 7.2E-31 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 Gene3D G3DSA:3.40.50.20 5 96 2.4E-32 T 14-10-2018 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 Gene3D G3DSA:3.30.470.20 186 318 2.2E-48 T 14-10-2018 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 4 103 5.1E-32 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 4 420 38.673 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 104 290 1.2E-65 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 SUPERFAMILY SSF51246 325 419 9.42E-21 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 4 420 1.9E-140 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 Gene3D G3DSA:3.90.600.10 326 430 1.4E-24 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 Gene3D G3DSA:3.30.1490.20 124 185 2.5E-16 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 284 291 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27330 6d174131cd21ad6dc22e6dd6624bdfb1 442 SUPERFAMILY SSF56059 105 312 1.11E-51 T 14-10-2018 PACID_18500 69a9a066834f33606f7d2d66e97a8d6d 372 Pfam PF13286 Phosphohydrolase-associated domain 272 352 4.4E-12 T 14-10-2018 IPR026875 Phosphohydrolase-associated domain PACID_18500 69a9a066834f33606f7d2d66e97a8d6d 372 SMART SM00471 109 228 3.4E-8 T 14-10-2018 IPR003607 HD/PDEase domain PACID_18500 69a9a066834f33606f7d2d66e97a8d6d 372 Gene3D G3DSA:1.10.3210.10 40 358 1.0E-69 T 14-10-2018 PACID_18500 69a9a066834f33606f7d2d66e97a8d6d 372 Pfam PF01966 HD domain 113 217 5.9E-13 T 14-10-2018 IPR006674 HD domain PACID_18500 69a9a066834f33606f7d2d66e97a8d6d 372 SUPERFAMILY SSF109604 71 355 1.86E-55 T 14-10-2018 PACID_04810 0f7e8daac20c00937e0a3ab099d483d3 227 Gene3D G3DSA:1.10.3720.10 9 225 2.8E-39 T 14-10-2018 IPR035906 MetI-like superfamily PACID_04810 0f7e8daac20c00937e0a3ab099d483d3 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 222 4.0E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_04810 0f7e8daac20c00937e0a3ab099d483d3 227 SUPERFAMILY SSF161098 12 208 1.7E-35 T 14-10-2018 IPR035906 MetI-like superfamily PACID_04810 0f7e8daac20c00937e0a3ab099d483d3 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 117 5.2E-16 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PACID_09700 e63437fa99e50019bb17a2adfbc9755c 183 Pfam PF01965 DJ-1/PfpI family 7 180 2.0E-42 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PACID_09700 e63437fa99e50019bb17a2adfbc9755c 183 SUPERFAMILY SSF52317 6 182 2.55E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_09700 e63437fa99e50019bb17a2adfbc9755c 183 Gene3D G3DSA:3.40.50.880 1 183 1.6E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_09700 e63437fa99e50019bb17a2adfbc9755c 183 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 10 182 9.9E-49 T 14-10-2018 IPR006286 Deglycase PfpI PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 Pfam PF02867 Ribonucleotide reductase, barrel domain 153 689 2.6E-144 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 428 450 4.5E-15 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 228 247 4.5E-15 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 390 413 4.5E-15 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 535 562 4.5E-15 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 PRINTS PR01183 Ribonucleotide reductase large chain signature 356 367 4.5E-15 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 Gene3D G3DSA:3.20.70.20 58 704 7.6E-199 T 14-10-2018 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 Pfam PF08471 Class II vitamin B12-dependent ribonucleotide reductase 49 132 9.5E-18 T 14-10-2018 IPR013678 Ribonucleotide reductase class II vitamin B12-dependent, N-terminal domain GO:0004748|GO:0050897|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 SUPERFAMILY SSF51998 153 693 4.27E-134 T 14-10-2018 PACID_16010 4cc82eb0a1178b5d3fdbbb6052c51469 954 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 113 699 3.3E-184 T 14-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_08050 37b928f6f8c3fa25a5d3c2d12936bb5d 222 SUPERFAMILY SSF109755 2 215 1.15E-53 T 14-10-2018 PACID_08050 37b928f6f8c3fa25a5d3c2d12936bb5d 222 PIRSF PIRSF003107 1 217 1.7E-52 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PACID_08050 37b928f6f8c3fa25a5d3c2d12936bb5d 222 Pfam PF01895 PhoU domain 122 203 2.6E-10 T 14-10-2018 IPR026022 PhoU domain PACID_08050 37b928f6f8c3fa25a5d3c2d12936bb5d 222 Pfam PF01895 PhoU domain 18 103 2.9E-18 T 14-10-2018 IPR026022 PhoU domain PACID_08050 37b928f6f8c3fa25a5d3c2d12936bb5d 222 Gene3D G3DSA:1.20.58.220 1 214 1.2E-59 T 14-10-2018 IPR038078 PhoU-like domain superfamily PACID_08050 37b928f6f8c3fa25a5d3c2d12936bb5d 222 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 4 211 7.0E-50 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 PACID_25150 f91267151088484c04f3f4cc7f1d88cd 238 Gene3D G3DSA:3.40.50.720 1 237 9.7E-51 T 14-10-2018 PACID_25150 f91267151088484c04f3f4cc7f1d88cd 238 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 235 9.0E-33 T 14-10-2018 PACID_25150 f91267151088484c04f3f4cc7f1d88cd 238 SUPERFAMILY SSF51735 3 237 6.26E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_25150 f91267151088484c04f3f4cc7f1d88cd 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 182 1.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_25150 f91267151088484c04f3f4cc7f1d88cd 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 1.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_25150 f91267151088484c04f3f4cc7f1d88cd 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_25150 f91267151088484c04f3f4cc7f1d88cd 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 1.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_25150 f91267151088484c04f3f4cc7f1d88cd 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 1.7E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_28850 bcf3102314fb9388a8eb53ccf8df4daa 407 SUPERFAMILY SSF52540 17 218 8.04E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28850 bcf3102314fb9388a8eb53ccf8df4daa 407 Pfam PF13177 DNA polymerase III, delta subunit 22 177 5.6E-36 T 14-10-2018 PACID_28850 bcf3102314fb9388a8eb53ccf8df4daa 407 Gene3D G3DSA:3.40.50.300 14 177 3.0E-47 T 14-10-2018 PACID_30950 47093fe6bc3ab127f8f20f2f4e60a2dd 340 SUPERFAMILY SSF53822 76 317 1.37E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_30950 47093fe6bc3ab127f8f20f2f4e60a2dd 340 SMART SM00354 3 73 2.8E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_30950 47093fe6bc3ab127f8f20f2f4e60a2dd 340 Gene3D G3DSA:3.40.50.2300 57 312 6.2E-53 T 14-10-2018 PACID_30950 47093fe6bc3ab127f8f20f2f4e60a2dd 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.7E-11 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_30950 47093fe6bc3ab127f8f20f2f4e60a2dd 340 Gene3D G3DSA:3.40.50.2300 168 295 6.2E-53 T 14-10-2018 PACID_30950 47093fe6bc3ab127f8f20f2f4e60a2dd 340 Gene3D G3DSA:1.10.260.40 1 56 3.8E-20 T 14-10-2018 PACID_30950 47093fe6bc3ab127f8f20f2f4e60a2dd 340 SUPERFAMILY SSF47413 3 61 2.61E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_30950 47093fe6bc3ab127f8f20f2f4e60a2dd 340 Pfam PF13377 Periplasmic binding protein-like domain 176 334 1.1E-28 T 14-10-2018 PACID_06270 7d0186348338163f39395ca07829dd74 169 SUPERFAMILY SSF52402 22 140 1.26E-8 T 14-10-2018 PACID_06270 7d0186348338163f39395ca07829dd74 169 Gene3D G3DSA:3.40.50.620 9 141 1.2E-8 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_06270 7d0186348338163f39395ca07829dd74 169 Pfam PF00582 Universal stress protein family 24 137 6.4E-6 T 14-10-2018 IPR006016 UspA PACID_22000 2b3fb8b0a04bbb4a96db556d5ee69bf1 458 Pfam PF00144 Beta-lactamase 28 298 5.5E-34 T 14-10-2018 IPR001466 Beta-lactamase-related PACID_22000 2b3fb8b0a04bbb4a96db556d5ee69bf1 458 SUPERFAMILY SSF56601 4 314 1.05E-63 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_22000 2b3fb8b0a04bbb4a96db556d5ee69bf1 458 Gene3D G3DSA:3.40.710.10 4 314 1.6E-60 T 14-10-2018 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 Hamap MF_01976 Pyrophosphate--fructose 6-phosphate 1-phosphotransferase [pfp]. 5 374 40.41 T 14-10-2018 IPR012829 Phosphofructokinase, mixed-substrate PFK group III GO:0006096|GO:0047334 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PIRSF PIRSF000532 3 375 1.1E-106 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 SUPERFAMILY SSF53784 2 366 1.7E-107 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 Pfam PF00365 Phosphofructokinase 6 324 6.3E-90 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 130 147 1.3E-50 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 1.3E-50 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 168 184 1.3E-50 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 222 234 1.3E-50 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 35 48 1.3E-50 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 103 119 1.3E-50 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 148 166 1.3E-50 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_02270 e657ea10e9821be15e134744f849f9aa 376 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 186 203 1.3E-50 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_17080 b575855471d03c4496a5df7b65fb4963 130 SUPERFAMILY SSF46689 59 109 1.79E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_17080 b575855471d03c4496a5df7b65fb4963 130 Gene3D G3DSA:1.10.10.60 5 111 9.2E-26 T 14-10-2018 PACID_17080 b575855471d03c4496a5df7b65fb4963 130 SUPERFAMILY SSF46689 8 57 1.34E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_17080 b575855471d03c4496a5df7b65fb4963 130 Pfam PF12833 Helix-turn-helix domain 29 107 5.7E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PACID_17080 b575855471d03c4496a5df7b65fb4963 130 SMART SM00342 23 105 3.7E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 PACID_28160 12991acabf2a94ac9864172bfcd5d2ef 467 Gene3D G3DSA:3.90.660.20 36 417 6.1E-76 T 14-10-2018 PACID_28160 12991acabf2a94ac9864172bfcd5d2ef 467 Pfam PF01593 Flavin containing amine oxidoreductase 13 462 5.1E-15 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 PACID_28160 12991acabf2a94ac9864172bfcd5d2ef 467 SUPERFAMILY SSF54373 310 415 5.49E-10 T 14-10-2018 PACID_28160 12991acabf2a94ac9864172bfcd5d2ef 467 SUPERFAMILY SSF51905 5 466 6.48E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_28160 12991acabf2a94ac9864172bfcd5d2ef 467 Gene3D G3DSA:1.10.3110.10 100 192 6.1E-76 T 14-10-2018 PACID_28160 12991acabf2a94ac9864172bfcd5d2ef 467 Gene3D G3DSA:3.50.50.60 7 459 6.1E-76 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 SMART SM00841 130 185 1.0E-31 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 Pfam PF01132 Elongation factor P (EF-P) OB domain 69 121 4.7E-23 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 ProSitePatterns PS01275 Elongation factor P signature. 151 170 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 TIGRFAM TIGR00038 efp: translation elongation factor P 3 186 1.2E-76 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 Gene3D G3DSA:2.40.50.140 129 187 5.4E-26 T 14-10-2018 PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 61 4.3E-25 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 SUPERFAMILY SSF50104 3 63 2.89E-19 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 Gene3D G3DSA:2.30.30.30 2 63 1.9E-26 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 SMART SM01185 68 122 2.0E-28 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 Gene3D G3DSA:2.40.50.140 65 128 6.0E-26 T 14-10-2018 PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 Pfam PF09285 Elongation factor P, C-terminal 130 185 1.9E-25 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 SUPERFAMILY SSF50249 66 130 1.37E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 PIRSF PIRSF005901 1 187 1.4E-66 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 SUPERFAMILY SSF50249 130 186 5.48E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_17720 8aca3c3eabf79534b9731b3515435c69 189 Hamap MF_00141 Elongation factor P [efp]. 2 186 47.983 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 PACID_31340 0f8f055d23a32162ffd2f20f2923d53a 273 PIRSF PIRSF015736 25 273 2.8E-48 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase PACID_31340 0f8f055d23a32162ffd2f20f2923d53a 273 Gene3D G3DSA:3.40.50.12500 34 273 5.6E-52 T 14-10-2018 PACID_20710 d663687ac43e7628e990920955e850bc 328 Pfam PF00781 Diacylglycerol kinase catalytic domain 10 141 3.9E-21 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PACID_20710 d663687ac43e7628e990920955e850bc 328 Gene3D G3DSA:3.40.50.10330 3 144 1.8E-23 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 PACID_20710 d663687ac43e7628e990920955e850bc 328 Gene3D G3DSA:2.60.200.40 154 309 2.5E-38 T 14-10-2018 PACID_20710 d663687ac43e7628e990920955e850bc 328 SUPERFAMILY SSF111331 7 315 1.98E-60 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PACID_20710 d663687ac43e7628e990920955e850bc 328 SMART SM00046 10 141 3.0E-6 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PACID_19050 2344c601c2edfd42b025a2d938f5f39a 258 Gene3D G3DSA:3.40.50.300 5 245 2.1E-56 T 14-10-2018 PACID_19050 2344c601c2edfd42b025a2d938f5f39a 258 SMART SM00382 34 213 2.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_19050 2344c601c2edfd42b025a2d938f5f39a 258 SUPERFAMILY SSF52540 8 229 2.13E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_19050 2344c601c2edfd42b025a2d938f5f39a 258 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_19050 2344c601c2edfd42b025a2d938f5f39a 258 Pfam PF00005 ABC transporter 25 165 1.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_14440 b7c519a2dd45727c49cba5a40fcdcb4a 191 Gene3D G3DSA:3.40.630.30 8 191 1.8E-17 T 14-10-2018 PACID_14440 b7c519a2dd45727c49cba5a40fcdcb4a 191 SUPERFAMILY SSF55729 18 148 2.48E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_14440 b7c519a2dd45727c49cba5a40fcdcb4a 191 Pfam PF00583 Acetyltransferase (GNAT) family 47 156 1.5E-12 T 14-10-2018 IPR000182 GNAT domain PACID_18230 c0d4942c4381d7262fdcb901bef7167c 281 Pfam PF00290 Tryptophan synthase alpha chain 9 250 1.3E-66 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PACID_18230 c0d4942c4381d7262fdcb901bef7167c 281 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 10 248 2.0E-61 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PACID_18230 c0d4942c4381d7262fdcb901bef7167c 281 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 270 30.796 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PACID_18230 c0d4942c4381d7262fdcb901bef7167c 281 Gene3D G3DSA:3.20.20.70 4 277 1.4E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_18230 c0d4942c4381d7262fdcb901bef7167c 281 SUPERFAMILY SSF51366 5 247 2.07E-71 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PACID_18230 c0d4942c4381d7262fdcb901bef7167c 281 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 52 65 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 172 200 5.8E-79 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 254 281 5.8E-79 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 8 31 5.8E-79 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 124 149 5.8E-79 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 362 384 5.8E-79 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 71 100 5.8E-79 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 PIRSF PIRSF000109 2 480 2.6E-191 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 183 471 9.1E-111 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 Gene3D G3DSA:3.40.50.720 2 184 1.0E-53 T 14-10-2018 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 SUPERFAMILY SSF48179 181 475 6.53E-105 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 Gene3D G3DSA:1.10.1040.10 185 438 6.6E-91 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 SUPERFAMILY SSF51735 8 181 1.17E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 177 3.9E-50 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 SMART SM01350 183 472 4.8E-173 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 Gene3D G3DSA:1.20.5.320 441 481 1.4E-13 T 14-10-2018 PACID_23140 d6805c06c3824b04ddc0a68b0b8b3981 481 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 9 472 1.4E-189 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_11940 d73ee22505d080f22437b2e119760283 240 Gene3D G3DSA:3.30.1050.40 107 240 2.6E-37 T 14-10-2018 PACID_11940 d73ee22505d080f22437b2e119760283 240 SUPERFAMILY SSF55718 179 233 5.3E-6 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PACID_27310 67d8a3bc834897fee93c0701486346ac 310 Pfam PF03466 LysR substrate binding domain 89 295 1.5E-42 T 14-10-2018 IPR005119 LysR, substrate-binding PACID_27310 67d8a3bc834897fee93c0701486346ac 310 Gene3D G3DSA:1.10.10.10 1 82 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_27310 67d8a3bc834897fee93c0701486346ac 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_27310 67d8a3bc834897fee93c0701486346ac 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_27310 67d8a3bc834897fee93c0701486346ac 310 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.6E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_27310 67d8a3bc834897fee93c0701486346ac 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 60 7.7E-17 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_27310 67d8a3bc834897fee93c0701486346ac 310 Gene3D G3DSA:3.40.190.10 93 294 4.6E-58 T 14-10-2018 PACID_27310 67d8a3bc834897fee93c0701486346ac 310 SUPERFAMILY SSF46785 1 113 9.67E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_27310 67d8a3bc834897fee93c0701486346ac 310 SUPERFAMILY SSF53850 91 300 8.69E-37 T 14-10-2018 PACID_27310 67d8a3bc834897fee93c0701486346ac 310 Gene3D G3DSA:3.40.190.10 163 265 4.6E-58 T 14-10-2018 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 SUPERFAMILY SSF53822 68 334 2.36E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 2.1E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 Pfam PF13407 Periplasmic binding protein domain 68 309 1.3E-28 T 14-10-2018 IPR025997 Periplasmic binding protein PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 SUPERFAMILY SSF47413 6 64 5.63E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 SMART SM00354 6 76 8.4E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 Gene3D G3DSA:1.10.260.40 1 64 6.4E-22 T 14-10-2018 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 Gene3D G3DSA:3.40.50.2300 69 326 1.3E-62 T 14-10-2018 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 Gene3D G3DSA:3.40.50.2300 165 331 1.3E-62 T 14-10-2018 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 3.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_30240 516474e2a5a7299b9c44f426d22e8ac4 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 3.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_20000 ab6a3097ab4855c6e1e60a546024f6f1 359 SUPERFAMILY SSF54211 245 341 4.93E-20 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_20000 ab6a3097ab4855c6e1e60a546024f6f1 359 SUPERFAMILY SSF50156 150 240 2.53E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PACID_20000 ab6a3097ab4855c6e1e60a546024f6f1 359 Gene3D G3DSA:3.30.230.10 236 342 6.1E-20 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_20000 ab6a3097ab4855c6e1e60a546024f6f1 359 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 249 326 2.7E-11 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 PACID_20000 ab6a3097ab4855c6e1e60a546024f6f1 359 Gene3D G3DSA:2.30.42.10 149 235 4.8E-14 T 14-10-2018 PACID_20000 ab6a3097ab4855c6e1e60a546024f6f1 359 Pfam PF13180 PDZ domain 147 212 2.2E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PACID_14110 e51582cf3647339e96d367df5a026a9b 243 SUPERFAMILY SSF75217 77 240 2.88E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PACID_14110 e51582cf3647339e96d367df5a026a9b 243 SUPERFAMILY SSF88697 15 72 4.47E-9 T 14-10-2018 IPR015947 PUA-like superfamily PACID_14110 e51582cf3647339e96d367df5a026a9b 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 19 239 1.4E-32 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PACID_14110 e51582cf3647339e96d367df5a026a9b 243 Pfam PF04452 RNA methyltransferase 19 238 1.8E-54 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PACID_14110 e51582cf3647339e96d367df5a026a9b 243 Gene3D G3DSA:3.40.1280.10 74 243 1.1E-47 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PACID_14110 e51582cf3647339e96d367df5a026a9b 243 Gene3D G3DSA:2.40.240.20 1 72 7.4E-18 T 14-10-2018 PACID_14110 e51582cf3647339e96d367df5a026a9b 243 PIRSF PIRSF015601 12 242 8.6E-44 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 PACID_30510 a406c9607074f7ce67699e91a3301c58 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 216 1.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_30510 a406c9607074f7ce67699e91a3301c58 226 SUPERFAMILY SSF161098 18 209 4.71E-35 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30510 a406c9607074f7ce67699e91a3301c58 226 Gene3D G3DSA:1.10.3720.10 18 216 6.0E-30 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07430 14daf4c17eed744cc481585a2d3b8843 310 Gene3D G3DSA:3.40.960.10 194 294 5.4E-9 T 14-10-2018 PACID_07430 14daf4c17eed744cc481585a2d3b8843 310 Pfam PF04480 Protein of unknown function (DUF559) 217 287 1.7E-5 T 14-10-2018 IPR007569 Protein of unknown function DUF559 PACID_28020 fe5c61faf06cb21e54d9d650a8b93861 67 Gene3D G3DSA:3.40.30.10 4 57 6.4E-8 T 14-10-2018 PACID_28020 fe5c61faf06cb21e54d9d650a8b93861 67 Pfam PF05768 Glutaredoxin-like domain (DUF836) 12 57 1.2E-4 T 14-10-2018 IPR008554 Glutaredoxin-like PACID_28020 fe5c61faf06cb21e54d9d650a8b93861 67 SUPERFAMILY SSF52833 10 58 3.08E-8 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_00130 a3b68b4376e75a6bf574f2e7d62465b0 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 7.5E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_00130 a3b68b4376e75a6bf574f2e7d62465b0 328 Gene3D G3DSA:3.40.50.720 2 153 7.4E-41 T 14-10-2018 PACID_00130 a3b68b4376e75a6bf574f2e7d62465b0 328 SUPERFAMILY SSF51735 4 150 7.74E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_00130 a3b68b4376e75a6bf574f2e7d62465b0 328 SUPERFAMILY SSF55347 127 291 1.52E-32 T 14-10-2018 PACID_00130 a3b68b4376e75a6bf574f2e7d62465b0 328 Gene3D G3DSA:3.30.360.10 154 325 4.5E-47 T 14-10-2018 PACID_25180 bdc41620285f9c7ae308841b9d335439 136 PIRSF PIRSF028777 1 128 3.6E-44 T 14-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 PACID_25180 bdc41620285f9c7ae308841b9d335439 136 Pfam PF03733 Inner membrane component domain 4 53 2.6E-17 T 14-10-2018 IPR005185 Inner membrane component domain PACID_25180 bdc41620285f9c7ae308841b9d335439 136 Pfam PF03733 Inner membrane component domain 68 118 4.5E-15 T 14-10-2018 IPR005185 Inner membrane component domain PACID_21180 e479035cba9394121ced23145281e7f0 334 SUPERFAMILY SSF53822 59 329 3.43E-60 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_21180 e479035cba9394121ced23145281e7f0 334 Gene3D G3DSA:1.10.260.40 1 56 5.8E-20 T 14-10-2018 PACID_21180 e479035cba9394121ced23145281e7f0 334 Gene3D G3DSA:3.40.50.2300 154 288 7.2E-67 T 14-10-2018 PACID_21180 e479035cba9394121ced23145281e7f0 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 1 19 - T 14-10-2018 PACID_21180 e479035cba9394121ced23145281e7f0 334 SMART SM00354 2 68 1.9E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_21180 e479035cba9394121ced23145281e7f0 334 SUPERFAMILY SSF47413 2 56 3.66E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_21180 e479035cba9394121ced23145281e7f0 334 Gene3D G3DSA:3.40.50.2300 57 309 7.2E-67 T 14-10-2018 PACID_21180 e479035cba9394121ced23145281e7f0 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 45 4.7E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_21180 e479035cba9394121ced23145281e7f0 334 Pfam PF13377 Periplasmic binding protein-like domain 164 327 6.5E-34 T 14-10-2018 PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 SUPERFAMILY SSF53335 10 510 3.83E-111 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 169 185 3.6E-18 T 14-10-2018 PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 192 206 3.6E-18 T 14-10-2018 PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 266 278 3.6E-18 T 14-10-2018 PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 300 324 3.6E-18 T 14-10-2018 PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 Gene3D G3DSA:1.20.1260.30 1 139 2.3E-19 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 Gene3D G3DSA:3.40.50.150 147 435 6.9E-85 T 14-10-2018 PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 Pfam PF12161 HsdM N-terminal domain 10 120 1.0E-15 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PACID_10550 d010aed46c7651f1a25e2e5c56fdfbaa 516 Pfam PF02384 N-6 DNA Methylase 146 476 3.3E-82 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 Pfam PF00122 E1-E2 ATPase 138 335 5.8E-50 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 SUPERFAMILY SSF56784 353 795 2.11E-54 T 14-10-2018 IPR036412 HAD-like superfamily PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 SUPERFAMILY SSF81653 142 249 1.14E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 SUPERFAMILY SSF81660 362 561 3.92E-44 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 557 568 4.6E-39 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 579 589 4.6E-39 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 677 696 4.6E-39 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 188 202 4.6E-39 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 701 713 4.6E-39 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 355 369 4.6E-39 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 Gene3D G3DSA:1.20.1110.10 74 955 0.0 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 Gene3D G3DSA:3.40.50.1000 352 722 0.0 T 14-10-2018 IPR023214 HAD superfamily PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 SMART SM00831 22 96 5.3E-28 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 Gene3D G3DSA:3.40.1110.10 365 564 0.0 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 Pfam PF00702 haloacid dehalogenase-like hydrolase 353 691 8.9E-21 T 14-10-2018 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 Pfam PF00689 Cation transporting ATPase, C-terminus 775 956 2.3E-50 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 645 761 4.5E-32 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 234 375 7.2E-23 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 357 363 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 SUPERFAMILY SSF81665 25 961 1.83E-120 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 Pfam PF00690 Cation transporter/ATPase, N-terminus 27 91 4.5E-22 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 PACID_32270 c6c26bb9fdf0699e28593bf9746aa645 969 Gene3D G3DSA:2.70.150.10 35 253 0.0 T 14-10-2018 PACID_11130 a01c450b3d0f1e6777b1546bea355ea8 323 Pfam PF00248 Aldo/keto reductase family 13 315 1.3E-56 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_11130 a01c450b3d0f1e6777b1546bea355ea8 323 PRINTS PR00069 Aldo-keto reductase signature 106 124 7.2E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_11130 a01c450b3d0f1e6777b1546bea355ea8 323 PRINTS PR00069 Aldo-keto reductase signature 137 154 7.2E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_11130 a01c450b3d0f1e6777b1546bea355ea8 323 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 137 154 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PACID_11130 a01c450b3d0f1e6777b1546bea355ea8 323 SUPERFAMILY SSF51430 2 319 2.75E-78 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_11130 a01c450b3d0f1e6777b1546bea355ea8 323 Gene3D G3DSA:3.20.20.100 1 322 2.2E-87 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 SUPERFAMILY SSF103473 51 245 9.02E-51 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 Gene3D G3DSA:1.20.1250.20 323 521 1.4E-20 T 14-10-2018 PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 Pfam PF07690 Major Facilitator Superfamily 253 473 1.2E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 Pfam PF07690 Major Facilitator Superfamily 69 245 5.3E-39 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 SUPERFAMILY SSF103473 252 519 1.1E-25 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 66 485 6.2E-82 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 Gene3D G3DSA:1.20.1720.10 66 268 1.2E-50 T 14-10-2018 PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 159 179 1.1E-5 T 14-10-2018 PACID_28300 fe31fbe5c780bd04c48feb04c7406310 542 PRINTS PR01036 Tetracycline resistance protein TetB signature 189 213 1.1E-5 T 14-10-2018 PACID_26040 0a554067d12ce73cba274c02cae8a6d5 56 Gene3D G3DSA:2.20.28.120 4 56 1.3E-25 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_26040 0a554067d12ce73cba274c02cae8a6d5 56 SUPERFAMILY SSF57829 5 56 3.85E-20 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 PACID_26040 0a554067d12ce73cba274c02cae8a6d5 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 24 43 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_26040 0a554067d12ce73cba274c02cae8a6d5 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 7.8E-24 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_26040 0a554067d12ce73cba274c02cae8a6d5 56 Pfam PF00471 Ribosomal protein L33 11 56 4.2E-24 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_26040 0a554067d12ce73cba274c02cae8a6d5 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 8 56 19.606 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_31670 70ed0763fafd0bf5951df5201178ddd3 182 Gene3D G3DSA:3.30.70.1280 1 88 1.9E-23 T 14-10-2018 PACID_31670 70ed0763fafd0bf5951df5201178ddd3 182 SUPERFAMILY SSF160379 1 179 6.93E-50 T 14-10-2018 PACID_31670 70ed0763fafd0bf5951df5201178ddd3 182 Pfam PF08002 Protein of unknown function (DUF1697) 1 136 7.4E-40 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 PACID_31670 70ed0763fafd0bf5951df5201178ddd3 182 PIRSF PIRSF008502 1 182 9.5E-44 T 14-10-2018 IPR012545 Protein of unknown function DUF1697 PACID_03140 ea61ccb53837adc3793dcee5f64d44e9 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 233 2.5E-35 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PACID_03140 ea61ccb53837adc3793dcee5f64d44e9 240 Gene3D G3DSA:3.20.20.190 1 240 4.8E-65 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PACID_03140 ea61ccb53837adc3793dcee5f64d44e9 240 SUPERFAMILY SSF51695 2 236 1.62E-54 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PACID_18050 74882081fb695e240266acc0933bed87 264 Gene3D G3DSA:3.30.70.980 86 249 1.6E-47 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_18050 74882081fb695e240266acc0933bed87 264 Pfam PF01709 Transcriptional regulator 5 250 2.2E-85 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_18050 74882081fb695e240266acc0933bed87 264 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 250 2.7E-87 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_18050 74882081fb695e240266acc0933bed87 264 Gene3D G3DSA:1.10.10.200 1 81 5.7E-32 T 14-10-2018 IPR017856 Integrase-like, N-terminal PACID_18050 74882081fb695e240266acc0933bed87 264 SUPERFAMILY SSF75625 3 259 1.19E-83 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_18050 74882081fb695e240266acc0933bed87 264 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 252 33.024 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_18050 74882081fb695e240266acc0933bed87 264 Gene3D G3DSA:3.30.70.980 135 216 1.6E-47 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_02260 3fac9a2d6d706f9213b973f325a34803 230 Gene3D G3DSA:1.10.10.10 139 207 1.3E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_02260 3fac9a2d6d706f9213b973f325a34803 230 SUPERFAMILY SSF46894 137 186 2.93E-5 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_10730 251a6d9243f7c1ac7c9ca93de30a5db5 344 Gene3D G3DSA:3.30.420.470 159 326 8.4E-14 T 14-10-2018 PACID_10730 251a6d9243f7c1ac7c9ca93de30a5db5 344 Pfam PF13358 DDE superfamily endonuclease 169 299 3.0E-29 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain PACID_10730 251a6d9243f7c1ac7c9ca93de30a5db5 344 SUPERFAMILY SSF46689 16 129 2.87E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_10730 251a6d9243f7c1ac7c9ca93de30a5db5 344 Pfam PF13592 Winged helix-turn helix 95 152 3.4E-22 T 14-10-2018 IPR025959 Winged helix-turn helix domain PACID_10730 251a6d9243f7c1ac7c9ca93de30a5db5 344 Pfam PF13551 Winged helix-turn helix 20 76 2.9E-8 T 14-10-2018 PACID_31210 815eb0b6a93f70980f21397fcc4dbd7b 397 Gene3D G3DSA:3.40.630.10 9 369 2.6E-82 T 14-10-2018 PACID_31210 815eb0b6a93f70980f21397fcc4dbd7b 397 SUPERFAMILY SSF53187 3 382 3.14E-54 T 14-10-2018 PACID_31210 815eb0b6a93f70980f21397fcc4dbd7b 397 Gene3D G3DSA:3.30.70.360 174 294 2.6E-82 T 14-10-2018 PACID_31210 815eb0b6a93f70980f21397fcc4dbd7b 397 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 70 79 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PACID_31210 815eb0b6a93f70980f21397fcc4dbd7b 397 Pfam PF01546 Peptidase family M20/M25/M40 71 378 1.2E-35 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PACID_31210 815eb0b6a93f70980f21397fcc4dbd7b 397 SUPERFAMILY SSF55031 180 278 4.04E-17 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PACID_31210 815eb0b6a93f70980f21397fcc4dbd7b 397 Pfam PF07687 Peptidase dimerisation domain 174 274 5.1E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_31210 815eb0b6a93f70980f21397fcc4dbd7b 397 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 104 139 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PACID_01320 7200cba1105e3cb953ba91600bbc5334 482 Gene3D G3DSA:3.40.309.10 246 444 1.6E-146 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_01320 7200cba1105e3cb953ba91600bbc5334 482 Pfam PF00171 Aldehyde dehydrogenase family 9 471 2.5E-141 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_01320 7200cba1105e3cb953ba91600bbc5334 482 Gene3D G3DSA:3.40.605.10 18 452 1.6E-146 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_01320 7200cba1105e3cb953ba91600bbc5334 482 SUPERFAMILY SSF53720 2 477 1.09E-140 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_01320 7200cba1105e3cb953ba91600bbc5334 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PACID_01320 7200cba1105e3cb953ba91600bbc5334 482 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 2 475 5.2E-162 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 280 6.4E-105 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 SUPERFAMILY SSF52518 22 363 1.38E-64 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 Pfam PF02779 Transketolase, pyrimidine binding domain 317 479 1.3E-31 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 7 615 2.7E-159 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 Pfam PF02780 Transketolase, C-terminal domain 502 610 6.7E-13 T 14-10-2018 IPR033248 Transketolase, C-terminal domain PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 SMART SM00861 317 481 3.6E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 ProSitePatterns PS00802 Transketolase signature 2. 423 439 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 SUPERFAMILY SSF52922 494 617 1.7E-16 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 SUPERFAMILY SSF52518 306 480 6.38E-46 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 3 619 37.596 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 ProSitePatterns PS00801 Transketolase signature 1. 29 48 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 Gene3D G3DSA:3.40.50.920 492 624 3.8E-23 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_16340 b84ba4d9996f0d7217e63537ab16e1d9 631 Gene3D G3DSA:3.40.50.970 315 487 3.1E-53 T 14-10-2018 PACID_14290 7105381fa59f6959f4c850e97fd45625 201 Pfam PF08241 Methyltransferase domain 46 140 3.1E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PACID_14290 7105381fa59f6959f4c850e97fd45625 201 Gene3D G3DSA:3.40.50.150 5 195 6.6E-36 T 14-10-2018 PACID_14290 7105381fa59f6959f4c850e97fd45625 201 SUPERFAMILY SSF53335 9 187 3.01E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_31280 74244c2b8504814025ddd580e3722ecf 146 Pfam PF09407 AbiEi antitoxin C-terminal domain 22 129 8.9E-6 T 14-10-2018 IPR018547 AbiEi antitoxin C-terminal domain PACID_07870 755213d91fe92bc8ac40726285b500fc 829 Pfam PF13229 Right handed beta helix region 498 654 1.3E-12 T 14-10-2018 IPR039448 Right handed beta helix domain PACID_07870 755213d91fe92bc8ac40726285b500fc 829 SUPERFAMILY SSF51126 284 720 6.79E-42 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor PACID_07870 755213d91fe92bc8ac40726285b500fc 829 SMART SM00710 644 665 0.038 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_07870 755213d91fe92bc8ac40726285b500fc 829 SMART SM00710 497 519 40.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_07870 755213d91fe92bc8ac40726285b500fc 829 SMART SM00710 598 620 290.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_07870 755213d91fe92bc8ac40726285b500fc 829 SMART SM00710 524 549 1200.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_07870 755213d91fe92bc8ac40726285b500fc 829 SMART SM00710 574 596 990.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_07870 755213d91fe92bc8ac40726285b500fc 829 SMART SM00710 621 643 47.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_07870 755213d91fe92bc8ac40726285b500fc 829 Gene3D G3DSA:2.160.20.10 280 423 9.4E-22 T 14-10-2018 IPR012334 Pectin lyase fold PACID_07870 755213d91fe92bc8ac40726285b500fc 829 Pfam PF07602 Protein of unknown function (DUF1565) 297 336 5.0E-5 T 14-10-2018 IPR011459 Domain of unknown function DUF1565 PACID_07870 755213d91fe92bc8ac40726285b500fc 829 Gene3D G3DSA:2.160.20.10 424 714 1.4E-26 T 14-10-2018 IPR012334 Pectin lyase fold PACID_30970 cdf80488ac57c9921493d5cbf0f1319b 415 SUPERFAMILY SSF53850 17 412 1.09E-62 T 14-10-2018 PACID_30970 cdf80488ac57c9921493d5cbf0f1319b 415 Pfam PF01547 Bacterial extracellular solute-binding protein 39 328 8.3E-45 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_30970 cdf80488ac57c9921493d5cbf0f1319b 415 Gene3D G3DSA:3.40.190.10 137 397 1.0E-68 T 14-10-2018 PACID_30970 cdf80488ac57c9921493d5cbf0f1319b 415 Gene3D G3DSA:3.40.190.10 38 370 1.0E-68 T 14-10-2018 PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 Gene3D G3DSA:3.40.980.10 192 337 2.4E-105 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 Gene3D G3DSA:3.90.105.10 33 191 2.4E-105 T 14-10-2018 PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 Pfam PF03453 MoeA N-terminal region (domain I and II) 16 184 4.2E-40 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 Gene3D G3DSA:2.40.340.10 338 403 2.4E-105 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 Gene3D G3DSA:2.170.190.11 56 158 2.4E-105 T 14-10-2018 PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 SUPERFAMILY SSF63882 15 191 1.31E-47 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 194 325 2.0E-27 T 14-10-2018 IPR001453 MoaB/Mog domain PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 Pfam PF00994 Probable molybdopterin binding domain 198 327 2.4E-21 T 14-10-2018 IPR001453 MoaB/Mog domain PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 SMART SM00852 197 329 3.2E-32 T 14-10-2018 IPR001453 MoaB/Mog domain PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 SUPERFAMILY SSF63867 337 410 3.79E-10 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 SUPERFAMILY SSF53218 194 333 1.96E-34 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PACID_02780 0d9990ae6455954570f4e4ebe12b003b 415 Pfam PF03454 MoeA C-terminal region (domain IV) 342 409 2.0E-7 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_15860 cfd4a3f603f60746523f81556aff6f72 103 Pfam PF01381 Helix-turn-helix 34 76 3.5E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_15860 cfd4a3f603f60746523f81556aff6f72 103 SUPERFAMILY SSF47413 24 86 1.64E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_15860 cfd4a3f603f60746523f81556aff6f72 103 Gene3D G3DSA:1.10.260.40 9 87 2.3E-14 T 14-10-2018 PACID_15860 cfd4a3f603f60746523f81556aff6f72 103 SMART SM00530 29 84 3.9E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_29830 bedc036854d62c60c81b7905617788a7 229 Gene3D G3DSA:3.40.50.2300 1 122 7.7E-37 T 14-10-2018 PACID_29830 bedc036854d62c60c81b7905617788a7 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 226 7.2E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_29830 bedc036854d62c60c81b7905617788a7 229 SUPERFAMILY SSF52172 1 128 1.71E-39 T 14-10-2018 IPR011006 CheY-like superfamily PACID_29830 bedc036854d62c60c81b7905617788a7 229 Gene3D G3DSA:1.10.10.10 123 227 3.8E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_29830 bedc036854d62c60c81b7905617788a7 229 Pfam PF00072 Response regulator receiver domain 5 113 1.3E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_29830 bedc036854d62c60c81b7905617788a7 229 SMART SM00448 2 112 5.5E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_29830 bedc036854d62c60c81b7905617788a7 229 SMART SM00862 150 226 1.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_29830 bedc036854d62c60c81b7905617788a7 229 SUPERFAMILY SSF46894 122 228 3.97E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_29380 747a56c53a934bec334e04c4d0e78bb9 121 Gene3D G3DSA:3.10.50.40 2 121 1.8E-39 T 14-10-2018 PACID_29380 747a56c53a934bec334e04c4d0e78bb9 121 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 27 117 4.4E-31 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PACID_29380 747a56c53a934bec334e04c4d0e78bb9 121 SUPERFAMILY SSF54534 12 120 1.3E-38 T 14-10-2018 PACID_24950 38d10f2d303a4b48422061c13a121169 240 Gene3D G3DSA:3.30.110.170 146 239 1.5E-11 T 14-10-2018 PACID_24950 38d10f2d303a4b48422061c13a121169 240 Pfam PF04402 Protein of unknown function (DUF541) 22 238 8.6E-23 T 14-10-2018 IPR007497 Protein of unknown function DUF541 PACID_24950 38d10f2d303a4b48422061c13a121169 240 Gene3D G3DSA:3.30.70.2970 41 145 1.5E-11 T 14-10-2018 PACID_07140 32cf123ee1840c6f734f37c5b577c610 239 PIRSF PIRSF001332 1 236 4.1E-76 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 PACID_07140 32cf123ee1840c6f734f37c5b577c610 239 Pfam PF03306 Alpha-acetolactate decarboxylase 7 223 1.8E-79 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 PACID_07140 32cf123ee1840c6f734f37c5b577c610 239 SUPERFAMILY SSF117856 5 235 8.37E-75 T 14-10-2018 PACID_07140 32cf123ee1840c6f734f37c5b577c610 239 Gene3D G3DSA:3.30.1330.80 6 222 2.4E-76 T 14-10-2018 PACID_07140 32cf123ee1840c6f734f37c5b577c610 239 Gene3D G3DSA:3.30.1330.80 81 203 2.4E-76 T 14-10-2018 PACID_07140 32cf123ee1840c6f734f37c5b577c610 239 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 5 235 2.6E-74 T 14-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 PACID_31380 39eb96be44b1e39a2e5a091465e7894b 283 SMART SM00062 41 267 7.0E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_31380 39eb96be44b1e39a2e5a091465e7894b 283 TIGRFAM TIGR02995 ectoine_ehuB: ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB 19 279 1.4E-77 T 14-10-2018 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB GO:0033294|GO:0051470 PACID_31380 39eb96be44b1e39a2e5a091465e7894b 283 SUPERFAMILY SSF53850 32 264 4.97E-37 T 14-10-2018 PACID_31380 39eb96be44b1e39a2e5a091465e7894b 283 Gene3D G3DSA:3.40.190.10 48 261 2.0E-56 T 14-10-2018 PACID_31380 39eb96be44b1e39a2e5a091465e7894b 283 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 264 7.5E-37 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_31380 39eb96be44b1e39a2e5a091465e7894b 283 Gene3D G3DSA:3.40.190.10 127 226 2.0E-56 T 14-10-2018 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 Gene3D G3DSA:3.30.1360.80 3 154 3.2E-58 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 11 143 1.0E-63 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 6 150 2.9E-53 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 PIRSF PIRSF006160 4 154 1.0E-59 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 76 94 4.2E-42 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 117 136 4.2E-42 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 8 26 4.2E-42 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 52 70 4.2E-42 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 31 49 4.2E-42 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 SUPERFAMILY SSF63411 4 152 6.23E-58 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PACID_09020 93fe7a74a841fce05cbd5317540c4990 154 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 4 154 33.456 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_17190 3d7d4ea6b07254d0960cf6abb95cd178 220 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 56 5.8E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_17190 3d7d4ea6b07254d0960cf6abb95cd178 220 SUPERFAMILY SSF48498 87 205 1.23E-15 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_17190 3d7d4ea6b07254d0960cf6abb95cd178 220 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 87 204 5.8E-12 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal PACID_17190 3d7d4ea6b07254d0960cf6abb95cd178 220 Gene3D G3DSA:1.10.357.10 1 216 3.7E-46 T 14-10-2018 PACID_17190 3d7d4ea6b07254d0960cf6abb95cd178 220 SUPERFAMILY SSF46689 2 76 1.05E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_30180 b80758252c80b24b82d333f4998c6705 331 SUPERFAMILY SSF53613 15 312 2.18E-71 T 14-10-2018 IPR029056 Ribokinase-like PACID_30180 b80758252c80b24b82d333f4998c6705 331 Gene3D G3DSA:3.40.1190.20 7 316 6.6E-90 T 14-10-2018 IPR029056 Ribokinase-like PACID_30180 b80758252c80b24b82d333f4998c6705 331 Pfam PF00294 pfkB family carbohydrate kinase 15 303 3.6E-58 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PACID_30180 b80758252c80b24b82d333f4998c6705 331 PRINTS PR00990 Ribokinase signature 44 63 1.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_30180 b80758252c80b24b82d333f4998c6705 331 PRINTS PR00990 Ribokinase signature 116 129 1.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_30180 b80758252c80b24b82d333f4998c6705 331 PRINTS PR00990 Ribokinase signature 17 38 1.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_30180 b80758252c80b24b82d333f4998c6705 331 PRINTS PR00990 Ribokinase signature 184 199 1.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_30180 b80758252c80b24b82d333f4998c6705 331 PRINTS PR00990 Ribokinase signature 228 239 1.0E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_30180 b80758252c80b24b82d333f4998c6705 331 Hamap MF_01987 Ribokinase [rbsK]. 13 313 23.196 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 PACID_21630 f4bea3a34f905612ccd36318e7693247 562 Gene3D G3DSA:3.40.50.10710 217 375 5.7E-169 T 14-10-2018 PACID_21630 f4bea3a34f905612ccd36318e7693247 562 Pfam PF00753 Metallo-beta-lactamase superfamily 27 174 8.1E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_21630 f4bea3a34f905612ccd36318e7693247 562 PIRSF PIRSF004803 10 562 1.7E-205 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 PACID_21630 f4bea3a34f905612ccd36318e7693247 562 SMART SM00849 31 225 5.9E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_21630 f4bea3a34f905612ccd36318e7693247 562 Gene3D G3DSA:3.10.20.580 459 562 2.1E-19 T 14-10-2018 PACID_21630 f4bea3a34f905612ccd36318e7693247 562 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 18 559 2.5E-148 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 PACID_21630 f4bea3a34f905612ccd36318e7693247 562 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 373 406 2.1E-5 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain PACID_21630 f4bea3a34f905612ccd36318e7693247 562 Gene3D G3DSA:3.60.15.10 18 446 5.7E-169 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_21630 f4bea3a34f905612ccd36318e7693247 562 Hamap MF_01491 Ribonuclease J [rnj]. 12 562 40.376 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 PACID_21630 f4bea3a34f905612ccd36318e7693247 562 SUPERFAMILY SSF56281 17 433 7.68E-91 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_31580 f6b9f11a71344a8138d409f63ee041b6 492 Gene3D G3DSA:3.30.420.40 1 245 9.0E-65 T 14-10-2018 PACID_31580 f6b9f11a71344a8138d409f63ee041b6 492 Gene3D G3DSA:3.30.420.40 246 491 6.0E-62 T 14-10-2018 PACID_31580 f6b9f11a71344a8138d409f63ee041b6 492 PIRSF PIRSF000538 2 489 3.6E-118 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_31580 f6b9f11a71344a8138d409f63ee041b6 492 SUPERFAMILY SSF53067 4 251 3.89E-51 T 14-10-2018 PACID_31580 f6b9f11a71344a8138d409f63ee041b6 492 SUPERFAMILY SSF53067 250 484 3.76E-52 T 14-10-2018 PACID_31580 f6b9f11a71344a8138d409f63ee041b6 492 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 255 440 5.1E-30 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_31580 f6b9f11a71344a8138d409f63ee041b6 492 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 244 3.9E-42 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_31580 f6b9f11a71344a8138d409f63ee041b6 492 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 352 372 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 Gene3D G3DSA:3.30.590.10 107 461 3.1E-151 T 14-10-2018 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 472 1.9E-198 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 SUPERFAMILY SSF55931 105 472 6.47E-138 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 Gene3D G3DSA:3.10.20.70 4 106 1.7E-38 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 390 402 - T 14-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 Pfam PF00120 Glutamine synthetase, catalytic domain 105 470 8.7E-137 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 97 2.0E-27 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 SMART SM01230 104 383 2.6E-154 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 261 276 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PACID_12010 79f7482ccc00cf0665c95754bb5695b1 473 SUPERFAMILY SSF54368 5 103 4.97E-33 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 191 219 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 Gene3D G3DSA:3.40.50.720 7 296 3.5E-90 T 14-10-2018 PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 SUPERFAMILY SSF51735 53 296 4.66E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 143 9.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 184 192 9.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 204 223 9.6E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 61 295 1.1E-61 T 14-10-2018 PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 56 73 1.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 194 1.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 143 1.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 260 280 1.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 223 1.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_29630 1b08bcfd5c94fde01905098f7440af08 299 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 242 1.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32930 e49883468652c73775c706dc0976f7bd 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 1.8E-12 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_32930 e49883468652c73775c706dc0976f7bd 335 Gene3D G3DSA:3.40.50.2300 165 290 3.0E-57 T 14-10-2018 PACID_32930 e49883468652c73775c706dc0976f7bd 335 Gene3D G3DSA:3.40.50.2300 60 305 3.0E-57 T 14-10-2018 PACID_32930 e49883468652c73775c706dc0976f7bd 335 SUPERFAMILY SSF53822 66 333 6.67E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_32930 e49883468652c73775c706dc0976f7bd 335 Pfam PF13377 Periplasmic binding protein-like domain 174 330 5.0E-29 T 14-10-2018 PACID_32930 e49883468652c73775c706dc0976f7bd 335 SUPERFAMILY SSF47413 3 64 4.9E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_32930 e49883468652c73775c706dc0976f7bd 335 Gene3D G3DSA:1.10.260.40 1 59 8.5E-20 T 14-10-2018 PACID_32930 e49883468652c73775c706dc0976f7bd 335 SMART SM00354 4 76 5.2E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_18090 9cf62e42c7074649a61b5b7a48266523 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 234 243 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 PACID_18090 9cf62e42c7074649a61b5b7a48266523 396 SUPERFAMILY SSF53383 42 368 4.39E-77 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_18090 9cf62e42c7074649a61b5b7a48266523 396 Gene3D G3DSA:3.40.640.10 64 284 1.2E-119 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_18090 9cf62e42c7074649a61b5b7a48266523 396 Gene3D G3DSA:3.90.1150.10 29 365 1.2E-119 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_18090 9cf62e42c7074649a61b5b7a48266523 396 Pfam PF00155 Aminotransferase class I and II 44 367 1.1E-56 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_18090 9cf62e42c7074649a61b5b7a48266523 396 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 32 367 4.2E-90 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PACID_18090 9cf62e42c7074649a61b5b7a48266523 396 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 22 371 53.92 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PACID_11370 71d0dc39998c4374cb0c23b99edfd6d5 483 PIRSF PIRSF002744 1 481 6.7E-112 T 14-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 PACID_11370 71d0dc39998c4374cb0c23b99edfd6d5 483 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 18 416 3.9E-39 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 PACID_11370 71d0dc39998c4374cb0c23b99edfd6d5 483 Gene3D G3DSA:1.10.4160.10 14 433 1.8E-28 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily PACID_13560 28083a87ddfd692aab35fc308abad106 531 Pfam PF00005 ABC transporter 36 174 8.8E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_13560 28083a87ddfd692aab35fc308abad106 531 Pfam PF00005 ABC transporter 359 482 2.1E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_13560 28083a87ddfd692aab35fc308abad106 531 SMART SM00382 358 529 0.004 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_13560 28083a87ddfd692aab35fc308abad106 531 SMART SM00382 33 334 3.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_13560 28083a87ddfd692aab35fc308abad106 531 Gene3D G3DSA:3.40.50.300 6 274 7.5E-48 T 14-10-2018 PACID_13560 28083a87ddfd692aab35fc308abad106 531 SUPERFAMILY SSF52540 5 231 7.34E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13560 28083a87ddfd692aab35fc308abad106 531 SUPERFAMILY SSF52540 354 515 1.29E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13560 28083a87ddfd692aab35fc308abad106 531 Gene3D G3DSA:3.40.50.300 354 531 2.4E-34 T 14-10-2018 PACID_06050 f71ea0e54cb205bda7ae35cb0e8926c1 206 Pfam PF13662 Toprim domain 79 170 3.1E-25 T 14-10-2018 IPR006171 TOPRIM domain PACID_06050 f71ea0e54cb205bda7ae35cb0e8926c1 206 TIGRFAM TIGR00615 recR: recombination protein RecR 2 195 2.0E-82 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PACID_06050 f71ea0e54cb205bda7ae35cb0e8926c1 206 Gene3D G3DSA:1.10.8.420 1 52 1.6E-20 T 14-10-2018 PACID_06050 f71ea0e54cb205bda7ae35cb0e8926c1 206 SUPERFAMILY SSF111304 1 197 3.92E-74 T 14-10-2018 IPR023627 Recombination protein RecR PACID_06050 f71ea0e54cb205bda7ae35cb0e8926c1 206 Gene3D G3DSA:3.40.1360.10 76 197 1.2E-47 T 14-10-2018 PACID_06050 f71ea0e54cb205bda7ae35cb0e8926c1 206 Pfam PF02132 RecR protein 38 77 7.9E-14 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger PACID_06050 f71ea0e54cb205bda7ae35cb0e8926c1 206 SMART SM00493 79 164 2.0E-15 T 14-10-2018 IPR006171 TOPRIM domain PACID_06050 f71ea0e54cb205bda7ae35cb0e8926c1 206 Hamap MF_00017 Recombination protein RecR [recR]. 1 197 104.82 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 PACID_11430 a6f1aa5b93f7ec00f834f670b83ad371 162 SUPERFAMILY SSF89623 3 148 1.19E-45 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_11430 a6f1aa5b93f7ec00f834f670b83ad371 162 Gene3D G3DSA:3.40.1400.10 2 154 9.7E-44 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_11430 a6f1aa5b93f7ec00f834f670b83ad371 162 Pfam PF02502 Ribose/Galactose Isomerase 5 143 5.3E-41 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_11430 a6f1aa5b93f7ec00f834f670b83ad371 162 PIRSF PIRSF005384 3 152 4.9E-41 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_11430 a6f1aa5b93f7ec00f834f670b83ad371 162 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 5 149 1.1E-31 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 SMART SM00382 44 242 1.3E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 SMART SM00382 336 525 8.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 275 8.4E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 527 556 4.7E-7 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 SUPERFAMILY SSF52540 307 547 1.38E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 Gene3D G3DSA:3.40.50.300 14 298 5.5E-77 T 14-10-2018 PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 Gene3D G3DSA:3.40.50.300 304 570 3.2E-79 T 14-10-2018 PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 Pfam PF00005 ABC transporter 36 193 1.0E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 SUPERFAMILY SSF52540 17 264 9.12E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_02530 d981e8810b0c4022df25ff64335ca36c 570 Pfam PF00005 ABC transporter 328 475 1.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_25110 f4bba500cbb5563496a8c6d77e98ca5b 274 Pfam PF08241 Methyltransferase domain 47 136 1.6E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PACID_25110 f4bba500cbb5563496a8c6d77e98ca5b 274 SUPERFAMILY SSF53335 18 249 1.2E-36 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_25110 f4bba500cbb5563496a8c6d77e98ca5b 274 Gene3D G3DSA:3.40.50.150 3 261 1.6E-35 T 14-10-2018 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 SUPERFAMILY SSF48179 281 457 1.46E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 Gene3D G3DSA:1.10.1040.10 280 467 5.5E-49 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 Gene3D G3DSA:3.40.50.720 3 279 6.4E-84 T 14-10-2018 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 215 405 2.0E-56 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 19 184 5.4E-23 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 SUPERFAMILY SSF51735 5 280 1.65E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 PRINTS PR00084 Mannitol dehydrogenase signature 20 30 1.5E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 PRINTS PR00084 Mannitol dehydrogenase signature 246 261 1.5E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 PRINTS PR00084 Mannitol dehydrogenase signature 175 188 1.5E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PACID_03020 19f19343e78fb34464e9ceec4f6c309e 467 PRINTS PR00084 Mannitol dehydrogenase signature 216 229 1.5E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 PACID_32360 b59591e4bcaab39ba79eaa52b5a25108 457 SUPERFAMILY SSF54909 74 440 2.68E-71 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_32360 b59591e4bcaab39ba79eaa52b5a25108 457 Pfam PF04261 Dyp-type peroxidase family 79 439 5.5E-84 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PACID_32360 b59591e4bcaab39ba79eaa52b5a25108 457 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 79 439 6.1E-69 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PACID_34320 8af0e33aae5b9d35748e9d5c2a92a86f 161 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 16 84 21.353 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PACID_34320 8af0e33aae5b9d35748e9d5c2a92a86f 161 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 30 83 1.0E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PACID_34320 8af0e33aae5b9d35748e9d5c2a92a86f 161 Pfam PF01809 Haemolytic domain 19 83 1.1E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PACID_34320 8af0e33aae5b9d35748e9d5c2a92a86f 161 SMART SM01234 16 83 3.6E-33 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PACID_34320 8af0e33aae5b9d35748e9d5c2a92a86f 161 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 23 87 7.7E-23 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor PACID_07780 b6c24e72a3b66b9494b9f30485a8a1e0 218 SUPERFAMILY SSF63817 69 214 3.53E-18 T 14-10-2018 IPR023365 Sortase domain superfamily PACID_07780 b6c24e72a3b66b9494b9f30485a8a1e0 218 Pfam PF04203 Sortase family 76 211 3.6E-18 T 14-10-2018 IPR005754 Sortase family PACID_07780 b6c24e72a3b66b9494b9f30485a8a1e0 218 Gene3D G3DSA:2.40.260.10 68 218 7.5E-35 T 14-10-2018 IPR023365 Sortase domain superfamily PACID_25140 731306d446dbaa1526d405a784452dc8 450 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 137 3.0E-38 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 SUPERFAMILY SSF53738 260 367 1.57E-28 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 98 107 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 176 195 2.0E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 2.0E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 97 111 2.0E-12 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 SUPERFAMILY SSF53738 158 259 2.04E-27 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 Gene3D G3DSA:3.40.120.10 259 342 8.2E-65 T 14-10-2018 PACID_25140 731306d446dbaa1526d405a784452dc8 450 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 260 371 4.9E-32 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 Gene3D G3DSA:3.40.120.10 176 365 8.2E-65 T 14-10-2018 PACID_25140 731306d446dbaa1526d405a784452dc8 450 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 447 44.127 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 SUPERFAMILY SSF55957 360 448 7.19E-22 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 159 256 2.3E-18 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 445 1.2E-174 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 Gene3D G3DSA:3.40.120.10 3 156 3.6E-44 T 14-10-2018 PACID_25140 731306d446dbaa1526d405a784452dc8 450 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 377 444 1.8E-13 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 SUPERFAMILY SSF53738 4 183 3.14E-44 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_25140 731306d446dbaa1526d405a784452dc8 450 Gene3D G3DSA:3.30.310.50 373 450 3.3E-24 T 14-10-2018 PACID_25220 a6cce244c35c50e6283c2e96b15057ee 296 Pfam PF01416 tRNA pseudouridine synthase 154 255 4.8E-19 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_25220 a6cce244c35c50e6283c2e96b15057ee 296 Gene3D G3DSA:3.30.70.580 4 112 2.1E-33 T 14-10-2018 PACID_25220 a6cce244c35c50e6283c2e96b15057ee 296 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 6 254 30.094 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_25220 a6cce244c35c50e6283c2e96b15057ee 296 PIRSF PIRSF001430 5 271 2.7E-70 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_25220 a6cce244c35c50e6283c2e96b15057ee 296 SUPERFAMILY SSF55120 5 260 3.16E-66 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_25220 a6cce244c35c50e6283c2e96b15057ee 296 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 9 248 1.5E-44 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_25220 a6cce244c35c50e6283c2e96b15057ee 296 Gene3D G3DSA:3.30.70.660 113 257 4.3E-33 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 PACID_13570 ecc310367c7ec1226b09efd038e26e0f 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 124 2.5E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PACID_13570 ecc310367c7ec1226b09efd038e26e0f 142 SUPERFAMILY SSF54593 5 134 5.91E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_13570 ecc310367c7ec1226b09efd038e26e0f 142 Gene3D G3DSA:3.10.180.10 2 141 8.2E-40 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 Gene3D G3DSA:3.20.20.70 12 333 1.9E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 Pfam PF08502 LeuA allosteric (dimerisation) domain 381 526 2.4E-23 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 SMART SM00917 381 529 7.2E-27 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 SUPERFAMILY SSF51569 10 300 3.85E-75 T 14-10-2018 PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 SUPERFAMILY SSF110921 440 524 4.18E-16 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 TIGRFAM TIGR00977 citramal_synth: citramalate synthase 12 529 2.2E-169 T 14-10-2018 IPR005675 Citramalate synthase GO:0019752|GO:0046912 KEGG: 00290+2.3.1.182|KEGG: 00660+2.3.1.182|MetaCyc: PWY-5101 PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 210 223 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 19 35 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 PACID_20580 677077cbfd1a52c119898f82c5c3bb80 535 Pfam PF00682 HMGL-like 12 263 2.5E-46 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 PACID_27440 4f0b4fd275e515b74d571f1295e21f3a 111 SUPERFAMILY SSF50118 5 109 3.49E-25 T 14-10-2018 PACID_27440 4f0b4fd275e515b74d571f1295e21f3a 111 Gene3D G3DSA:2.30.30.110 4 111 2.7E-27 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PACID_27440 4f0b4fd275e515b74d571f1295e21f3a 111 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 6 108 6.8E-24 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 PRINTS PR00473 Galactokinase signature 84 95 1.0E-11 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 PRINTS PR00473 Galactokinase signature 21 39 1.0E-11 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 PRINTS PR00473 Galactokinase signature 288 302 1.0E-11 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 PRINTS PR00473 Galactokinase signature 104 122 1.0E-11 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 Pfam PF10509 Galactokinase galactose-binding signature 15 51 1.4E-9 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 SUPERFAMILY SSF54211 16 164 2.73E-25 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_26600 822c7e461fffb55800bed59f46502ee1 410 Pfam PF00288 GHMP kinases N terminal domain 106 148 6.3E-8 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 PIRSF PIRSF000530 7 409 1.5E-40 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 PRINTS PR00959 Mevalonate kinase family signature 19 43 1.8E-16 T 14-10-2018 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 PRINTS PR00959 Mevalonate kinase family signature 111 133 1.8E-16 T 14-10-2018 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 PRINTS PR00959 Mevalonate kinase family signature 352 369 1.8E-16 T 14-10-2018 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 Gene3D G3DSA:3.30.230.10 9 219 1.5E-35 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_26600 822c7e461fffb55800bed59f46502ee1 410 Gene3D G3DSA:3.30.70.890 220 394 1.8E-19 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_26600 822c7e461fffb55800bed59f46502ee1 410 SUPERFAMILY SSF55060 217 386 3.6E-18 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_26600 822c7e461fffb55800bed59f46502ee1 410 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 113 124 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 PACID_26600 822c7e461fffb55800bed59f46502ee1 410 Pfam PF08544 GHMP kinases C terminal 305 384 7.0E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 Gene3D G3DSA:3.50.50.60 284 470 5.3E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 SUPERFAMILY SSF51971 148 403 1.24E-63 T 14-10-2018 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 Gene3D G3DSA:3.50.50.60 147 283 9.4E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 149 458 3.9E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 477 1.6E-198 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 43 134 2.1E-21 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 PRINTS PR00419 Adrenodoxin reductase family signature 214 224 4.2E-24 T 14-10-2018 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 PRINTS PR00419 Adrenodoxin reductase family signature 172 185 4.2E-24 T 14-10-2018 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 PRINTS PR00419 Adrenodoxin reductase family signature 288 302 4.2E-24 T 14-10-2018 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 PRINTS PR00419 Adrenodoxin reductase family signature 149 171 4.2E-24 T 14-10-2018 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 SUPERFAMILY SSF46548 5 158 1.88E-35 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_18200 46f6969d70e85cc2e1bab0ff8d202cb7 489 Gene3D G3DSA:1.10.1060.10 12 146 1.7E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_19030 f6d5f0663a2838c1d271139e1abe83cc 352 Gene3D G3DSA:3.40.190.10 45 315 4.5E-60 T 14-10-2018 PACID_19030 f6d5f0663a2838c1d271139e1abe83cc 352 Pfam PF09084 NMT1/THI5 like 52 268 1.7E-48 T 14-10-2018 IPR015168 SsuA/THI5-like PACID_19030 f6d5f0663a2838c1d271139e1abe83cc 352 Gene3D G3DSA:3.40.190.10 124 225 4.5E-60 T 14-10-2018 PACID_19030 f6d5f0663a2838c1d271139e1abe83cc 352 SUPERFAMILY SSF53850 45 326 9.64E-26 T 14-10-2018 PACID_01250 f20860801e302ffe9fab2f9dfacdb1c9 525 SUPERFAMILY SSF52540 148 471 6.0E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01250 f20860801e302ffe9fab2f9dfacdb1c9 525 Gene3D G3DSA:3.30.450.380 92 260 7.9E-7 T 14-10-2018 PACID_01250 f20860801e302ffe9fab2f9dfacdb1c9 525 Pfam PF00437 Type II/IV secretion system protein 170 448 5.7E-35 T 14-10-2018 IPR001482 Type II/IV secretion system protein PACID_01250 f20860801e302ffe9fab2f9dfacdb1c9 525 Gene3D G3DSA:3.40.50.300 261 476 3.3E-48 T 14-10-2018 PACID_23470 14c211bb2828c57b242b59a1ba214d24 280 SUPERFAMILY SSF54506 6 278 1.18E-75 T 14-10-2018 PACID_23470 14c211bb2828c57b242b59a1ba214d24 280 PIRSF PIRSF016184 2 280 2.1E-72 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PACID_23470 14c211bb2828c57b242b59a1ba214d24 280 Pfam PF02567 Phenazine biosynthesis-like protein 10 276 5.4E-61 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PACID_23470 14c211bb2828c57b242b59a1ba214d24 280 Gene3D G3DSA:3.10.310.10 126 272 2.9E-82 T 14-10-2018 PACID_23470 14c211bb2828c57b242b59a1ba214d24 280 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 6 276 1.8E-60 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 PACID_23470 14c211bb2828c57b242b59a1ba214d24 280 Gene3D G3DSA:3.10.310.10 9 273 2.9E-82 T 14-10-2018 PACID_33530 65ad49f7ddc1b0daeda2a72ee158f2b6 403 Gene3D G3DSA:1.20.1250.20 33 394 2.9E-40 T 14-10-2018 PACID_33530 65ad49f7ddc1b0daeda2a72ee158f2b6 403 SUPERFAMILY SSF103473 31 399 4.32E-43 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_33530 65ad49f7ddc1b0daeda2a72ee158f2b6 403 Pfam PF07690 Major Facilitator Superfamily 37 267 1.9E-27 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_29270 551622dbecb90c1d036450a543c476c5 187 SUPERFAMILY SSF54518 8 176 4.71E-16 T 14-10-2018 IPR025659 Tubby-like, C-terminal PACID_29270 551622dbecb90c1d036450a543c476c5 187 Gene3D G3DSA:3.20.90.20 4 181 2.2E-6 T 14-10-2018 IPR038595 LURP-one-related superfamily PACID_28660 4b046a3813e250758f3e6f9dadb32299 332 Gene3D G3DSA:3.50.30.60 187 316 1.1E-27 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily PACID_28660 4b046a3813e250758f3e6f9dadb32299 332 Pfam PF02016 LD-carboxypeptidase 26 306 8.2E-54 T 14-10-2018 IPR003507 Peptidase family S66 PACID_28660 4b046a3813e250758f3e6f9dadb32299 332 Gene3D G3DSA:3.40.50.10740 13 172 6.9E-42 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal PACID_28660 4b046a3813e250758f3e6f9dadb32299 332 SUPERFAMILY SSF52317 18 177 3.8E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_28660 4b046a3813e250758f3e6f9dadb32299 332 SUPERFAMILY SSF141986 180 315 6.8E-29 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily PACID_28660 4b046a3813e250758f3e6f9dadb32299 332 PIRSF PIRSF028757 14 323 6.7E-55 T 14-10-2018 IPR003507 Peptidase family S66 PACID_32450 315abdb498da1dec43cac629fc4d80ed 163 SMART SM00871 3 156 0.003 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding PACID_32450 315abdb498da1dec43cac629fc4d80ed 163 Gene3D G3DSA:3.20.80.10 1 158 3.7E-14 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily PACID_32450 315abdb498da1dec43cac629fc4d80ed 163 SUPERFAMILY SSF55136 4 155 4.39E-5 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily PACID_11210 03fc162f15f5cab178176d579375e5c8 728 Pfam PF02310 B12 binding domain 599 713 6.6E-15 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PACID_11210 03fc162f15f5cab178176d579375e5c8 728 Gene3D G3DSA:3.40.50.280 563 725 9.5E-53 T 14-10-2018 PACID_11210 03fc162f15f5cab178176d579375e5c8 728 SUPERFAMILY SSF52242 563 725 1.2E-56 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 PACID_11210 03fc162f15f5cab178176d579375e5c8 728 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 596 724 1.1E-60 T 14-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_11210 03fc162f15f5cab178176d579375e5c8 728 SUPERFAMILY SSF51703 26 559 1.23E-213 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_11210 03fc162f15f5cab178176d579375e5c8 728 Pfam PF01642 Methylmalonyl-CoA mutase 40 557 3.8E-226 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_11210 03fc162f15f5cab178176d579375e5c8 728 Gene3D G3DSA:3.20.20.240 38 559 2.9E-239 T 14-10-2018 PACID_11210 03fc162f15f5cab178176d579375e5c8 728 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 38 564 5.5E-279 T 14-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_16510 d9c713a5b7fb02128480a7de384f213a 353 SUPERFAMILY SSF50129 1 196 2.2E-53 T 14-10-2018 IPR011032 GroES-like superfamily PACID_16510 d9c713a5b7fb02128480a7de384f213a 353 SMART SM00829 12 348 9.0E-8 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_16510 d9c713a5b7fb02128480a7de384f213a 353 Gene3D G3DSA:3.90.180.10 15 348 4.4E-128 T 14-10-2018 PACID_16510 d9c713a5b7fb02128480a7de384f213a 353 Pfam PF00107 Zinc-binding dehydrogenase 192 314 2.3E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_16510 d9c713a5b7fb02128480a7de384f213a 353 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 150 1.0E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_16510 d9c713a5b7fb02128480a7de384f213a 353 SUPERFAMILY SSF51735 155 317 6.22E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_16510 d9c713a5b7fb02128480a7de384f213a 353 Gene3D G3DSA:3.40.50.720 166 320 4.4E-128 T 14-10-2018 PACID_16510 d9c713a5b7fb02128480a7de384f213a 353 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 Gene3D G3DSA:3.50.50.60 144 261 2.3E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 Gene3D G3DSA:3.30.390.30 330 448 9.3E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 164 189 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 418 438 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 128 137 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 328 349 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 248 262 1.2E-49 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 SUPERFAMILY SSF51905 2 301 1.77E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 SUPERFAMILY SSF55424 328 444 1.43E-27 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 332 442 3.2E-21 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 Gene3D G3DSA:3.50.50.60 4 316 2.3E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PIRSF PIRSF000350 1 440 1.8E-79 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 303 6.3E-56 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 125 143 7.8E-33 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 247 263 7.8E-33 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 164 182 7.8E-33 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 7.8E-33 T 14-10-2018 PACID_03860 13b78fa6b76f4b2c5f39e66c027cdaa4 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 7.8E-33 T 14-10-2018 PACID_10820 6a8ed93ee1233903f463580725dfe52b 111 Pfam PF01934 Protein of unknown function DUF86 13 106 1.9E-23 T 14-10-2018 IPR008201 Protein of unknown function DUF86 PACID_24800 d3271d37f1026dfac6241d2b57c5ae36 87 Pfam PF04226 Transglycosylase associated protein 34 83 2.8E-9 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 PACID_08320 2483f17e3e1346cf1cf5a194f3f0e0d2 585 Pfam PF09972 Predicted membrane protein (DUF2207) 48 538 9.1E-36 T 14-10-2018 IPR018702 Protein of unknown function DUF2207, membrane PACID_31230 02b97fb5bd2d1f487e121558fb32b5b3 412 Gene3D G3DSA:3.90.230.10 177 408 2.4E-39 T 14-10-2018 PACID_31230 02b97fb5bd2d1f487e121558fb32b5b3 412 SUPERFAMILY SSF53092 19 176 1.92E-33 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PACID_31230 02b97fb5bd2d1f487e121558fb32b5b3 412 SUPERFAMILY SSF55920 178 404 2.62E-49 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PACID_31230 02b97fb5bd2d1f487e121558fb32b5b3 412 Pfam PF00557 Metallopeptidase family M24 185 393 5.3E-28 T 14-10-2018 IPR000994 Peptidase M24 PACID_31230 02b97fb5bd2d1f487e121558fb32b5b3 412 Gene3D G3DSA:3.40.350.10 7 176 3.1E-33 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal PACID_31230 02b97fb5bd2d1f487e121558fb32b5b3 412 Pfam PF01321 Creatinase/Prolidase N-terminal domain 31 178 2.8E-24 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 PACID_19650 b21b9d27429c9d23078f3899bf5e4f28 292 Pfam PF05175 Methyltransferase small domain 124 200 1.6E-10 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PACID_19650 b21b9d27429c9d23078f3899bf5e4f28 292 Gene3D G3DSA:3.40.50.150 94 292 1.3E-47 T 14-10-2018 PACID_19650 b21b9d27429c9d23078f3899bf5e4f28 292 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 13 291 36.333 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PACID_19650 b21b9d27429c9d23078f3899bf5e4f28 292 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 35 287 5.6E-67 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 PACID_19650 b21b9d27429c9d23078f3899bf5e4f28 292 Gene3D G3DSA:1.10.8.10 15 93 3.3E-17 T 14-10-2018 PACID_19650 b21b9d27429c9d23078f3899bf5e4f28 292 SUPERFAMILY SSF53335 21 289 9.71E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_19650 b21b9d27429c9d23078f3899bf5e4f28 292 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 33 290 8.1E-46 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 PACID_31960 7a4cd6186ad82eaf6bdb276dd1b9b996 503 Pfam PF00135 Carboxylesterase family 6 467 1.3E-76 T 14-10-2018 IPR002018 Carboxylesterase, type B PACID_31960 7a4cd6186ad82eaf6bdb276dd1b9b996 503 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 183 198 - T 14-10-2018 IPR019826 Carboxylesterase type B, active site PACID_31960 7a4cd6186ad82eaf6bdb276dd1b9b996 503 SUPERFAMILY SSF53474 5 480 4.22E-93 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_31960 7a4cd6186ad82eaf6bdb276dd1b9b996 503 Gene3D G3DSA:3.40.50.1820 1 499 4.2E-112 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_33870 504c308a7ff1a64cec12cdc86f529ccf 202 SUPERFAMILY SSF51735 1 200 1.59E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_33870 504c308a7ff1a64cec12cdc86f529ccf 202 Gene3D G3DSA:3.40.50.720 2 202 2.9E-37 T 14-10-2018 PACID_33870 504c308a7ff1a64cec12cdc86f529ccf 202 Pfam PF13460 NAD(P)H-binding 7 190 9.7E-21 T 14-10-2018 IPR016040 NAD(P)-binding domain PACID_03180 e688d49a78b107d0fc4b5231921b2639 161 Pfam PF13508 Acetyltransferase (GNAT) domain 74 145 4.5E-7 T 14-10-2018 IPR000182 GNAT domain PACID_03180 e688d49a78b107d0fc4b5231921b2639 161 SUPERFAMILY SSF55729 7 152 1.98E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_03180 e688d49a78b107d0fc4b5231921b2639 161 Gene3D G3DSA:3.40.630.30 2 158 9.2E-36 T 14-10-2018 PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 14 683 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Gene3D G3DSA:3.40.50.300 6 250 1.4E-72 T 14-10-2018 PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 SUPERFAMILY SSF46600 643 688 7.45E-10 T 14-10-2018 IPR036876 UVR domain superfamily PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 SUPERFAMILY SSF52540 13 422 6.09E-131 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Pfam PF12344 Ultra-violet resistance protein B 559 600 5.5E-23 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 SMART SM00487 18 433 4.1E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 SUPERFAMILY SSF52540 41 592 1.68E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Gene3D G3DSA:3.40.50.300 277 421 2.0E-54 T 14-10-2018 PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Gene3D G3DSA:4.10.860.10 637 688 2.7E-6 T 14-10-2018 PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Gene3D G3DSA:3.40.50.300 422 603 8.3E-50 T 14-10-2018 PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 SMART SM00490 467 553 6.6E-19 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Pfam PF04851 Type III restriction enzyme, res subunit 21 147 4.0E-9 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Pfam PF02151 UvrB/uvrC motif 652 684 1.3E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Pfam PF00271 Helicase conserved C-terminal domain 446 551 1.5E-17 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_13080 f233d1c729c1a3932ff69df5e7eea1c3 694 Hamap MF_00204 UvrABC system protein B [uvrB]. 12 685 42.625 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 SUPERFAMILY SSF51445 561 844 5.71E-52 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Pfam PF07691 PA14 domain 83 180 3.7E-20 T 14-10-2018 IPR011658 PA14 domain PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 SMART SM00560 929 1067 4.5E-15 T 14-10-2018 IPR006558 LamG-like jellyroll fold PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 364 440 6.6E-12 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 SUPERFAMILY SSF49785 301 473 9.07E-44 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 SUPERFAMILY SSF49899 868 1072 3.51E-32 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 914 1070 1.3E-25 T 14-10-2018 PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Gene3D G3DSA:3.90.182.10 30 212 2.1E-22 T 14-10-2018 PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Gene3D G3DSA:3.20.20.80 573 850 2.2E-47 T 14-10-2018 PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Gene3D G3DSA:2.60.40.10 475 564 2.9E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Pfam PF00703 Glycosyl hydrolases family 2 487 563 4.4E-7 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Gene3D G3DSA:2.60.120.200 865 1074 2.0E-32 T 14-10-2018 PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 SUPERFAMILY SSF56988 44 198 1.12E-28 T 14-10-2018 PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 SUPERFAMILY SSF49303 477 564 3.45E-11 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 SMART SM00758 42 181 2.5E-30 T 14-10-2018 IPR011658 PA14 domain PACID_02860 1e620f8c6ed594d4ac41d5b777355f51 1074 Gene3D G3DSA:2.60.120.260 306 473 9.8E-36 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 Gene3D G3DSA:1.10.10.760 435 473 5.9E-164 T 14-10-2018 PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 SUPERFAMILY SSF81296 8 80 5.83E-12 T 14-10-2018 IPR014756 Immunoglobulin E-set PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 TIGRFAM TIGR02402 trehalose_TreZ: malto-oligosyltrehalose trehalohydrolase 10 536 2.1E-192 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 PIRSF PIRSF006337 3 584 1.1E-193 T 14-10-2018 IPR012768 Malto-oligosyltrehalose trehalohydrolase GO:0004553|GO:0005992 KEGG: 00500+3.2.1.141|MetaCyc: PWY-2661 PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 SUPERFAMILY SSF51445 79 507 4.58E-97 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 SMART SM00642 100 500 7.3E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 Pfam PF00128 Alpha amylase, catalytic domain 114 194 1.3E-13 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 Pfam PF11941 Domain of unknown function (DUF3459) 492 565 1.1E-5 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 Gene3D G3DSA:2.60.40.10 1 79 9.5E-17 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_05850 c0cea8f08c18583c3d1c5f75eb32c7ba 584 Gene3D G3DSA:3.20.20.80 88 501 5.9E-164 T 14-10-2018 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.2E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 PRINTS PR00108 Thymidylate synthase family signature 165 191 1.2E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.2E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 PRINTS PR00108 Thymidylate synthase family signature 203 220 1.2E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.2E-48 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 Gene3D G3DSA:3.30.572.10 1 270 2.8E-130 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 Hamap MF_00008 Thymidylate synthase [thyA]. 1 270 40.265 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 SUPERFAMILY SSF55831 1 270 1.18E-127 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 Pfam PF00303 Thymidylate synthase 2 270 4.0E-123 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 8.3E-39 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_23830 9616c597119fff71e9a80d4856cbbc9b 270 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 270 3.4E-89 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 PACID_03450 66f5679a7c161de8f220bc67e5c75179 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 18 62 1.8E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_03450 66f5679a7c161de8f220bc67e5c75179 195 SUPERFAMILY SSF46689 1 75 2.64E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_03450 66f5679a7c161de8f220bc67e5c75179 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 59 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PACID_03450 66f5679a7c161de8f220bc67e5c75179 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_03450 66f5679a7c161de8f220bc67e5c75179 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_03450 66f5679a7c161de8f220bc67e5c75179 195 SUPERFAMILY SSF48498 84 191 2.2E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_03450 66f5679a7c161de8f220bc67e5c75179 195 Gene3D G3DSA:1.10.357.10 1 192 1.5E-25 T 14-10-2018 PACID_16910 6b58123901b3efcf322bab3ffdea61ba 508 Pfam PF01381 Helix-turn-helix 13 63 8.1E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_16910 6b58123901b3efcf322bab3ffdea61ba 508 Gene3D G3DSA:3.65.10.10 92 306 9.7E-119 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PACID_16910 6b58123901b3efcf322bab3ffdea61ba 508 SUPERFAMILY SSF47413 7 64 4.5E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_16910 6b58123901b3efcf322bab3ffdea61ba 508 SMART SM00530 12 67 3.0E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_16910 6b58123901b3efcf322bab3ffdea61ba 508 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 78 494 1.8E-48 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 PACID_16910 6b58123901b3efcf322bab3ffdea61ba 508 SUPERFAMILY SSF55205 75 506 6.54E-96 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PACID_16910 6b58123901b3efcf322bab3ffdea61ba 508 Gene3D G3DSA:1.10.260.40 3 65 2.4E-16 T 14-10-2018 PACID_16910 6b58123901b3efcf322bab3ffdea61ba 508 Gene3D G3DSA:3.65.10.10 77 503 9.7E-119 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PACID_21210 01e0cb023c6e1aedbdf61ede03e9f706 377 Gene3D G3DSA:3.40.190.10 41 375 4.1E-36 T 14-10-2018 PACID_21210 01e0cb023c6e1aedbdf61ede03e9f706 377 SUPERFAMILY SSF53850 45 367 6.79E-33 T 14-10-2018 PACID_21210 01e0cb023c6e1aedbdf61ede03e9f706 377 Pfam PF01547 Bacterial extracellular solute-binding protein 85 314 1.1E-8 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 Gene3D G3DSA:2.40.50.140 223 302 5.8E-30 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 Gene3D G3DSA:2.40.50.140 303 386 3.1E-29 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 SUPERFAMILY SSF50249 127 210 1.86E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 Gene3D G3DSA:2.40.50.140 138 219 2.9E-12 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 Gene3D G3DSA:2.40.50.140 42 137 1.9E-22 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 SUPERFAMILY SSF50249 226 306 8.92E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 SMART SM00316 311 382 2.1E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 SMART SM00316 226 296 1.4E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 SMART SM00316 140 207 8.0E-11 T 14-10-2018 IPR022967 RNA-binding domain, S1 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 SMART SM00316 53 124 1.3E-16 T 14-10-2018 IPR022967 RNA-binding domain, S1 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 Pfam PF00575 S1 RNA binding domain 310 382 4.0E-22 T 14-10-2018 IPR003029 S1 domain GO:0003676 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 Pfam PF00575 S1 RNA binding domain 142 207 4.7E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 Pfam PF00575 S1 RNA binding domain 225 296 1.5E-25 T 14-10-2018 IPR003029 S1 domain GO:0003676 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 Pfam PF00575 S1 RNA binding domain 52 124 6.4E-15 T 14-10-2018 IPR003029 S1 domain GO:0003676 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 SUPERFAMILY SSF50249 296 384 8.21E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 145 161 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 365 383 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 55 73 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 248 269 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 326 345 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 73 87 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 162 179 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 191 211 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 PRINTS PR00681 Ribosomal protein S1 signature 121 140 7.9E-86 T 14-10-2018 PACID_13040 ebb59ab7adb472e7637f76792a246cf7 503 SUPERFAMILY SSF50249 48 149 6.42E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_05360 8dd4cb23b4eb242f513365c97c9b8722 268 Pfam PF07690 Major Facilitator Superfamily 8 212 9.4E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_05360 8dd4cb23b4eb242f513365c97c9b8722 268 SUPERFAMILY SSF103473 6 259 8.11E-23 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_05360 8dd4cb23b4eb242f513365c97c9b8722 268 Gene3D G3DSA:1.20.1250.20 61 262 9.2E-19 T 14-10-2018 PACID_27250 7e514a06a39328d57517625b92cb0314 854 SUPERFAMILY SSF63737 5 199 4.32E-39 T 14-10-2018 PACID_27250 7e514a06a39328d57517625b92cb0314 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 300 315 6.6E-18 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_27250 7e514a06a39328d57517625b92cb0314 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 266 276 6.6E-18 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_27250 7e514a06a39328d57517625b92cb0314 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 134 149 6.6E-18 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_27250 7e514a06a39328d57517625b92cb0314 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 182 197 6.6E-18 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_27250 7e514a06a39328d57517625b92cb0314 854 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 319 331 6.6E-18 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_27250 7e514a06a39328d57517625b92cb0314 854 Gene3D G3DSA:1.10.390.60 209 453 8.8E-65 T 14-10-2018 PACID_27250 7e514a06a39328d57517625b92cb0314 854 Gene3D G3DSA:2.60.40.1730 78 200 6.3E-28 T 14-10-2018 PACID_27250 7e514a06a39328d57517625b92cb0314 854 SUPERFAMILY SSF55486 213 457 8.35E-69 T 14-10-2018 PACID_27250 7e514a06a39328d57517625b92cb0314 854 Pfam PF01433 Peptidase family M1 domain 236 448 1.3E-53 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_27250 7e514a06a39328d57517625b92cb0314 854 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 849 6.5E-304 T 14-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 PACID_27250 7e514a06a39328d57517625b92cb0314 854 Pfam PF11838 ERAP1-like C-terminal domain 532 841 8.3E-49 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 PIRSF PIRSF000709 144 218 0.3 T 14-10-2018 PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 PIRSF PIRSF000709 2 112 1.5E-7 T 14-10-2018 PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 SMART SM00855 4 190 1.4E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 Gene3D G3DSA:3.40.50.1240 2 249 8.1E-82 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 SUPERFAMILY SSF53254 1 245 8.57E-73 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 2 231 42.605 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 4 248 1.3E-112 T 14-10-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 7 16 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 5 130 2.2E-28 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_08040 9e77f769bec81dc9524200bd8ea5990e 249 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 145 208 2.9E-5 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_08020 20edbbad1003726d87d650758bbc5651 557 Gene3D G3DSA:3.20.20.60 227 549 2.6E-87 T 14-10-2018 PACID_08020 20edbbad1003726d87d650758bbc5651 557 SUPERFAMILY SSF51621 240 517 9.95E-78 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PACID_08020 20edbbad1003726d87d650758bbc5651 557 Gene3D G3DSA:1.10.274.10 23 140 2.1E-47 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PACID_08020 20edbbad1003726d87d650758bbc5651 557 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 120 7.7E-16 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 PACID_08020 20edbbad1003726d87d650758bbc5651 557 PIRSF PIRSF000732 1 551 2.5E-142 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 PACID_08020 20edbbad1003726d87d650758bbc5651 557 SUPERFAMILY SSF52009 119 235 3.27E-29 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PACID_08020 20edbbad1003726d87d650758bbc5651 557 Pfam PF00391 PEP-utilising enzyme, mobile domain 147 218 2.3E-21 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PACID_08020 20edbbad1003726d87d650758bbc5651 557 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 247 517 3.8E-72 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 PACID_08020 20edbbad1003726d87d650758bbc5651 557 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 542 3.2E-114 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 PACID_08020 20edbbad1003726d87d650758bbc5651 557 SUPERFAMILY SSF47831 34 137 1.96E-16 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 PACID_08020 20edbbad1003726d87d650758bbc5651 557 Gene3D G3DSA:3.50.30.10 6 226 2.1E-47 T 14-10-2018 PACID_08020 20edbbad1003726d87d650758bbc5651 557 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 428 443 2.7E-21 T 14-10-2018 PACID_08020 20edbbad1003726d87d650758bbc5651 557 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 479 491 2.7E-21 T 14-10-2018 PACID_08020 20edbbad1003726d87d650758bbc5651 557 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 283 302 2.7E-21 T 14-10-2018 PACID_08020 20edbbad1003726d87d650758bbc5651 557 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 445 460 2.7E-21 T 14-10-2018 PACID_00890 605f1e1558246e120558e530b3e1c72b 633 Pfam PF08279 HTH domain 7 62 7.7E-7 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 PACID_00890 605f1e1558246e120558e530b3e1c72b 633 Gene3D G3DSA:3.40.930.10 488 628 5.9E-19 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_00890 605f1e1558246e120558e530b3e1c72b 633 Pfam PF00874 PRD domain 299 377 2.9E-7 T 14-10-2018 IPR011608 PRD domain GO:0006355 PACID_00890 605f1e1558246e120558e530b3e1c72b 633 Gene3D G3DSA:1.10.1790.10 284 380 1.1E-6 T 14-10-2018 PACID_00890 605f1e1558246e120558e530b3e1c72b 633 SUPERFAMILY SSF63520 291 378 1.44E-7 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 PACID_00890 605f1e1558246e120558e530b3e1c72b 633 Gene3D G3DSA:1.10.10.10 2 143 4.4E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_00890 605f1e1558246e120558e530b3e1c72b 633 SUPERFAMILY SSF46785 3 63 2.34E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_00890 605f1e1558246e120558e530b3e1c72b 633 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 490 627 5.0E-18 T 14-10-2018 IPR002178 PTS EIIA type-2 domain PACID_00890 605f1e1558246e120558e530b3e1c72b 633 SUPERFAMILY SSF55804 488 627 1.16E-25 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 Gene3D G3DSA:3.40.50.300 348 570 5.6E-53 T 14-10-2018 PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 19 561 1.6E-178 T 14-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 SUPERFAMILY SSF52540 347 562 3.28E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 Pfam PF00664 ABC transporter transmembrane region 22 279 8.3E-24 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 SMART SM00382 380 564 2.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 ProSitePatterns PS00211 ABC transporters family signature. 489 503 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 Gene3D G3DSA:1.20.1560.10 6 319 3.4E-45 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 SUPERFAMILY SSF90123 4 326 1.05E-49 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_05270 6c56a352ae656077ed8072ab0f12963b 591 Pfam PF00005 ABC transporter 371 521 8.8E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_21100 db5d485bc3fb48ecd69b9e5d68efa6f0 503 SUPERFAMILY SSF50443 331 498 6.8E-59 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal PACID_21100 db5d485bc3fb48ecd69b9e5d68efa6f0 503 Gene3D G3DSA:3.40.50.10940 3 177 9.4E-73 T 14-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 PACID_21100 db5d485bc3fb48ecd69b9e5d68efa6f0 503 PIRSF PIRSF001478 3 501 8.7E-221 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 PACID_21100 db5d485bc3fb48ecd69b9e5d68efa6f0 503 Pfam PF02610 L-arabinose isomerase 7 360 5.6E-169 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 PACID_21100 db5d485bc3fb48ecd69b9e5d68efa6f0 503 Hamap MF_00519 L-arabinose isomerase [araA]. 3 478 60.817 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 PACID_21100 db5d485bc3fb48ecd69b9e5d68efa6f0 503 Pfam PF11762 L-arabinose isomerase C-terminal domain 364 477 7.3E-45 T 14-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 PACID_21100 db5d485bc3fb48ecd69b9e5d68efa6f0 503 SUPERFAMILY SSF53743 6 328 6.28E-115 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 PACID_21100 db5d485bc3fb48ecd69b9e5d68efa6f0 503 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 10 306 6.0E-115 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 PACID_09860 91c9df78f0f28687e65cd704d81b4a0d 285 Gene3D G3DSA:3.40.1010.10 1 118 4.6E-32 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PACID_09860 91c9df78f0f28687e65cd704d81b4a0d 285 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 212 9.2E-34 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PACID_09860 91c9df78f0f28687e65cd704d81b4a0d 285 PIRSF PIRSF005917 1 282 3.7E-88 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PACID_09860 91c9df78f0f28687e65cd704d81b4a0d 285 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 277 2.3E-60 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PACID_09860 91c9df78f0f28687e65cd704d81b4a0d 285 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 9 229 33.113 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 PACID_09860 91c9df78f0f28687e65cd704d81b4a0d 285 SUPERFAMILY SSF53790 8 227 7.2E-73 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PACID_09860 91c9df78f0f28687e65cd704d81b4a0d 285 Gene3D G3DSA:3.30.950.10 119 233 2.6E-42 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PACID_21700 02a996f3b267239550fac657c1cef001 311 Pfam PF06574 FAD synthetase 10 159 1.5E-41 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PACID_21700 02a996f3b267239550fac657c1cef001 311 Gene3D G3DSA:3.40.50.620 2 178 1.2E-56 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_21700 02a996f3b267239550fac657c1cef001 311 PIRSF PIRSF004491 3 310 6.0E-89 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PACID_21700 02a996f3b267239550fac657c1cef001 311 SUPERFAMILY SSF82114 167 306 5.67E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 PACID_21700 02a996f3b267239550fac657c1cef001 311 SMART SM00904 176 306 1.6E-45 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 PACID_21700 02a996f3b267239550fac657c1cef001 311 SUPERFAMILY SSF52374 14 169 2.0E-29 T 14-10-2018 PACID_21700 02a996f3b267239550fac657c1cef001 311 Pfam PF01687 Riboflavin kinase 177 305 6.8E-30 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 PACID_21700 02a996f3b267239550fac657c1cef001 311 Gene3D G3DSA:2.40.30.30 179 309 2.8E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 PACID_21700 02a996f3b267239550fac657c1cef001 311 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 16 79 2.7E-8 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PACID_21700 02a996f3b267239550fac657c1cef001 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 16 305 6.0E-61 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 PACID_10940 e8d2355cfdeb10fe1761ce877d4b762d 667 SUPERFAMILY SSF90123 32 356 2.22E-68 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_10940 e8d2355cfdeb10fe1761ce877d4b762d 667 Gene3D G3DSA:3.40.50.300 367 621 1.4E-84 T 14-10-2018 PACID_10940 e8d2355cfdeb10fe1761ce877d4b762d 667 SUPERFAMILY SSF52540 367 612 5.98E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_10940 e8d2355cfdeb10fe1761ce877d4b762d 667 ProSitePatterns PS00211 ABC transporters family signature. 514 528 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_10940 e8d2355cfdeb10fe1761ce877d4b762d 667 Pfam PF00005 ABC transporter 393 542 2.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_10940 e8d2355cfdeb10fe1761ce877d4b762d 667 Pfam PF00664 ABC transporter transmembrane region 48 323 2.3E-39 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_10940 e8d2355cfdeb10fe1761ce877d4b762d 667 Gene3D G3DSA:1.20.1560.10 10 356 1.1E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_10940 e8d2355cfdeb10fe1761ce877d4b762d 667 SMART SM00382 402 594 2.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_01510 8c60fe51876a9406bab8902885606da5 480 SUPERFAMILY SSF103473 14 466 4.32E-59 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_01510 8c60fe51876a9406bab8902885606da5 480 Pfam PF07690 Major Facilitator Superfamily 30 427 2.9E-45 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_01510 8c60fe51876a9406bab8902885606da5 480 Gene3D G3DSA:1.20.1720.10 22 237 4.1E-47 T 14-10-2018 PACID_01510 8c60fe51876a9406bab8902885606da5 480 Gene3D G3DSA:1.20.1250.20 273 477 1.1E-15 T 14-10-2018 PACID_01510 8c60fe51876a9406bab8902885606da5 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 25 49 6.6E-12 T 14-10-2018 PACID_01510 8c60fe51876a9406bab8902885606da5 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 418 437 6.6E-12 T 14-10-2018 PACID_01510 8c60fe51876a9406bab8902885606da5 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 85 107 6.6E-12 T 14-10-2018 PACID_01510 8c60fe51876a9406bab8902885606da5 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 146 170 6.6E-12 T 14-10-2018 PACID_33810 33e39e741fd6aa1f7d13ec07d3948fb4 446 SUPERFAMILY SSF53850 59 435 4.95E-69 T 14-10-2018 PACID_33810 33e39e741fd6aa1f7d13ec07d3948fb4 446 Pfam PF13416 Bacterial extracellular solute-binding protein 75 378 1.8E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_33810 33e39e741fd6aa1f7d13ec07d3948fb4 446 Gene3D G3DSA:3.40.190.10 54 445 1.1E-77 T 14-10-2018 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 Gene3D G3DSA:3.40.50.2300 155 281 1.2E-58 T 14-10-2018 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 SUPERFAMILY SSF47413 1 59 4.69E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 Gene3D G3DSA:1.10.260.40 1 54 1.1E-22 T 14-10-2018 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 SMART SM00354 1 71 3.2E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 Gene3D G3DSA:3.40.50.2300 55 297 1.2E-58 T 14-10-2018 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 Pfam PF13377 Periplasmic binding protein-like domain 163 327 1.1E-29 T 14-10-2018 PACID_03700 ba7b4c87219d207e2d98ff5ac6fe9c95 333 SUPERFAMILY SSF53822 58 300 1.04E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_11900 7efe9fe06d4f3160c8c53febfad53e38 364 SUPERFAMILY SSF143865 70 291 3.66E-40 T 14-10-2018 PACID_11900 7efe9fe06d4f3160c8c53febfad53e38 364 Pfam PF01544 CorA-like Mg2+ transporter protein 72 360 1.0E-55 T 14-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 PACID_11900 7efe9fe06d4f3160c8c53febfad53e38 364 SUPERFAMILY SSF144083 299 362 1.19E-18 T 14-10-2018 PACID_11900 7efe9fe06d4f3160c8c53febfad53e38 364 Gene3D G3DSA:1.20.58.340 287 364 1.6E-23 T 14-10-2018 PACID_11900 7efe9fe06d4f3160c8c53febfad53e38 364 Gene3D G3DSA:3.30.460.20 41 167 4.5E-16 T 14-10-2018 PACID_11900 7efe9fe06d4f3160c8c53febfad53e38 364 Gene3D G3DSA:1.20.58.340 171 285 2.3E-23 T 14-10-2018 PACID_07650 477349ac74d2a687ddcbf1cc66718129 339 Gene3D G3DSA:3.10.105.10 261 339 2.3E-13 T 14-10-2018 PACID_07650 477349ac74d2a687ddcbf1cc66718129 339 Gene3D G3DSA:3.10.105.10 33 152 4.6E-27 T 14-10-2018 PACID_07650 477349ac74d2a687ddcbf1cc66718129 339 SUPERFAMILY SSF53850 67 334 1.03E-63 T 14-10-2018 PACID_07650 477349ac74d2a687ddcbf1cc66718129 339 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 70 318 1.7E-51 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PACID_07650 477349ac74d2a687ddcbf1cc66718129 339 Gene3D G3DSA:3.40.190.100 154 260 2.3E-29 T 14-10-2018 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 Pfam PF13377 Periplasmic binding protein-like domain 177 359 1.4E-33 T 14-10-2018 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 57 1.0E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 SUPERFAMILY SSF47413 11 66 2.86E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 ProSitePatterns PS00356 LacI-type HTH domain signature. 13 31 - T 14-10-2018 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 SUPERFAMILY SSF53822 70 362 8.64E-61 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_06610 302b221bc1dc50f22832f494cce55a46 364 Gene3D G3DSA:3.40.50.2300 70 338 1.0E-70 T 14-10-2018 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 Gene3D G3DSA:1.10.260.40 2 67 2.2E-21 T 14-10-2018 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 9.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 22 32 9.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 SMART SM00354 10 80 2.1E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_06610 302b221bc1dc50f22832f494cce55a46 364 Gene3D G3DSA:3.40.50.2300 169 323 1.0E-70 T 14-10-2018 PACID_14250 adf168c59e06e35b02d0fb2f8d3b6c3a 236 Hamap MF_02088 Probable queuosine precursor transporter. 19 228 14.904 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PACID_14250 adf168c59e06e35b02d0fb2f8d3b6c3a 236 Pfam PF02592 Putative vitamin uptake transporter 52 214 6.5E-39 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PACID_14250 adf168c59e06e35b02d0fb2f8d3b6c3a 236 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 28 222 1.4E-21 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 Gene3D G3DSA:3.40.50.1000 313 576 6.0E-75 T 14-10-2018 IPR023214 HAD superfamily PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 Gene3D G3DSA:3.40.1110.10 343 457 6.0E-75 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 Pfam PF00122 E1-E2 ATPase 134 311 4.5E-45 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 84 627 8.5E-163 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 543 4.2E-27 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 450 461 4.2E-27 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 548 560 4.2E-27 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 183 197 4.2E-27 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 4.2E-27 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 472 482 4.2E-27 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 Gene3D G3DSA:2.70.150.20 127 238 2.2E-30 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 107 603 3.6E-75 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 497 513 1.5E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 556 581 1.5E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 524 540 1.5E-6 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 Pfam PF00702 haloacid dehalogenase-like hydrolase 328 538 1.3E-39 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 84 628 6.2E-143 T 14-10-2018 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 SUPERFAMILY SSF56784 331 624 9.79E-47 T 14-10-2018 IPR036412 HAD-like superfamily PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 SUPERFAMILY SSF81665 85 589 9.68E-8 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PACID_00870 54d8fefb8d14d4da33140ffe185591db 632 SUPERFAMILY SSF81653 136 233 6.15E-21 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PACID_04780 0c2dfd2eb3db7a43a64d353d5477a3ce 319 Pfam PF00294 pfkB family carbohydrate kinase 24 303 1.2E-30 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PACID_04780 0c2dfd2eb3db7a43a64d353d5477a3ce 319 PIRSF PIRSF000535 1 317 6.3E-57 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PACID_04780 0c2dfd2eb3db7a43a64d353d5477a3ce 319 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 315 5.6E-84 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 PACID_04780 0c2dfd2eb3db7a43a64d353d5477a3ce 319 SUPERFAMILY SSF53613 1 307 4.83E-58 T 14-10-2018 IPR029056 Ribokinase-like PACID_04780 0c2dfd2eb3db7a43a64d353d5477a3ce 319 Gene3D G3DSA:3.40.1190.20 1 318 3.4E-91 T 14-10-2018 IPR029056 Ribokinase-like PACID_04780 0c2dfd2eb3db7a43a64d353d5477a3ce 319 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PACID_27550 40a74920f9e428e7ecd34bf5fcecef31 161 SMART SM01022 29 151 1.5E-34 T 14-10-2018 IPR007374 ASCH domain PACID_27550 40a74920f9e428e7ecd34bf5fcecef31 161 SUPERFAMILY SSF88697 6 153 1.79E-45 T 14-10-2018 IPR015947 PUA-like superfamily PACID_27550 40a74920f9e428e7ecd34bf5fcecef31 161 Pfam PF04266 ASCH domain 39 148 3.1E-19 T 14-10-2018 IPR007374 ASCH domain PACID_27550 40a74920f9e428e7ecd34bf5fcecef31 161 PIRSF PIRSF021320 3 154 2.4E-44 T 14-10-2018 IPR009326 Protein of unknown function DUF984 PACID_27550 40a74920f9e428e7ecd34bf5fcecef31 161 Gene3D G3DSA:3.10.400.10 4 157 5.0E-53 T 14-10-2018 PACID_03580 c8ca1b2a182db22f94de1005e2148710 403 Pfam PF13186 Iron-sulfur cluster-binding domain 277 337 2.9E-9 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain PACID_03580 c8ca1b2a182db22f94de1005e2148710 403 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 156 398 1.0E-9 T 14-10-2018 PACID_03580 c8ca1b2a182db22f94de1005e2148710 403 SUPERFAMILY SSF102114 8 346 1.44E-42 T 14-10-2018 PACID_03580 c8ca1b2a182db22f94de1005e2148710 403 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 1 384 3.4E-132 T 14-10-2018 PACID_03580 c8ca1b2a182db22f94de1005e2148710 403 Pfam PF04055 Radical SAM superfamily 6 172 4.6E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_03580 c8ca1b2a182db22f94de1005e2148710 403 Gene3D G3DSA:3.20.20.70 1 387 2.9E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_03580 c8ca1b2a182db22f94de1005e2148710 403 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 277 365 6.1E-17 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain PACID_19320 287cf66c52e3952ad72a7cf47891161f 219 Gene3D G3DSA:1.20.1200.10 28 211 8.6E-51 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PACID_19320 287cf66c52e3952ad72a7cf47891161f 219 Pfam PF01923 Cobalamin adenosyltransferase 7 188 2.2E-52 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PACID_19320 287cf66c52e3952ad72a7cf47891161f 219 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 13 154 1.0E-49 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PACID_19320 287cf66c52e3952ad72a7cf47891161f 219 SUPERFAMILY SSF89028 6 195 4.9E-53 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PACID_19320 287cf66c52e3952ad72a7cf47891161f 219 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 8 196 6.9E-41 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 SUPERFAMILY SSF46785 15 104 1.02E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 18 73 9.1E-11 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 SMART SM00529 39 138 2.2E-39 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 Pfam PF04023 FeoA domain 159 230 9.0E-12 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 SUPERFAMILY SSF47979 78 150 1.96E-26 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 SUPERFAMILY SSF50037 143 232 1.14E-6 T 14-10-2018 IPR008988 Transcriptional repressor, C-terminal PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 Gene3D G3DSA:2.30.30.90 160 233 3.7E-7 T 14-10-2018 IPR038157 Ferrous iron transporter, core domain PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 SMART SM00899 159 233 4.3E-8 T 14-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 Gene3D G3DSA:1.10.10.10 13 150 1.8E-47 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_02070 5ef3c7042d53542ae97bc6b61940618b 234 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 78 147 3.7E-30 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 PACID_33060 35163169b79bd9a6590d55e8d778960e 142 Gene3D G3DSA:3.40.50.1010 6 133 8.5E-8 T 14-10-2018 PACID_33060 35163169b79bd9a6590d55e8d778960e 142 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 7 135 12.824 T 14-10-2018 IPR022907 VapC family GO:0004540 PACID_33060 35163169b79bd9a6590d55e8d778960e 142 Pfam PF01850 PIN domain 9 127 5.3E-9 T 14-10-2018 IPR002716 PIN domain PACID_33060 35163169b79bd9a6590d55e8d778960e 142 SUPERFAMILY SSF88723 8 135 3.92E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily PACID_27890 0e05858156ab9100de5a4ce696a1fd14 730 Gene3D G3DSA:1.20.1640.10 168 358 3.9E-14 T 14-10-2018 PACID_27890 0e05858156ab9100de5a4ce696a1fd14 730 SUPERFAMILY SSF82866 128 354 1.02E-35 T 14-10-2018 PACID_27890 0e05858156ab9100de5a4ce696a1fd14 730 Pfam PF03176 MMPL family 66 388 6.9E-58 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 PACID_27890 0e05858156ab9100de5a4ce696a1fd14 730 Pfam PF03176 MMPL family 510 726 4.3E-49 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 PACID_27890 0e05858156ab9100de5a4ce696a1fd14 730 SUPERFAMILY SSF82866 504 727 1.07E-30 T 14-10-2018 PACID_22700 564acf56d516da718edead94a522b441 263 SUPERFAMILY SSF52833 84 247 9.59E-21 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_22700 564acf56d516da718edead94a522b441 263 Gene3D G3DSA:3.40.30.10 48 263 5.8E-40 T 14-10-2018 PACID_22700 564acf56d516da718edead94a522b441 263 Pfam PF13462 Thioredoxin 87 247 4.0E-15 T 14-10-2018 IPR012336 Thioredoxin-like fold PACID_26390 144ed22ff8ebd50212f96090fbb065cc 236 Hamap MF_01357 NAD(P)H-quinone oxidoreductase subunit J, chloroplastic [ndhJ]. 70 224 28.397 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26390 144ed22ff8ebd50212f96090fbb065cc 236 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 94 215 1.2E-42 T 14-10-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26390 144ed22ff8ebd50212f96090fbb065cc 236 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 142 205 3.0E-26 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26390 144ed22ff8ebd50212f96090fbb065cc 236 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 93 216 1.5E-45 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26390 144ed22ff8ebd50212f96090fbb065cc 236 Gene3D G3DSA:3.30.460.80 50 196 3.2E-47 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26390 144ed22ff8ebd50212f96090fbb065cc 236 SUPERFAMILY SSF143243 68 233 6.41E-48 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26870 980ae25173a8bf6631b76a4a215fbe6f 430 Gene3D G3DSA:1.20.1250.20 9 408 4.4E-34 T 14-10-2018 PACID_26870 980ae25173a8bf6631b76a4a215fbe6f 430 SUPERFAMILY SSF103473 16 410 4.97E-38 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_26870 980ae25173a8bf6631b76a4a215fbe6f 430 Pfam PF05977 Transmembrane secretion effector 10 366 1.3E-28 T 14-10-2018 IPR010290 Transmembrane secretion effector PACID_29470 e402430841c50b6a67f04f4472b24661 211 SUPERFAMILY SSF109604 102 172 6.91E-5 T 14-10-2018 PACID_29470 e402430841c50b6a67f04f4472b24661 211 Gene3D G3DSA:1.10.3210.10 14 200 7.5E-24 T 14-10-2018 PACID_29470 e402430841c50b6a67f04f4472b24661 211 Pfam PF13328 HD domain 16 167 6.0E-9 T 14-10-2018 IPR003607 HD/PDEase domain PACID_29470 e402430841c50b6a67f04f4472b24661 211 SUPERFAMILY SSF109604 15 75 3.22E-10 T 14-10-2018 PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 8.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 8.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 8.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 8.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 8.5E-21 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 SUPERFAMILY SSF51735 7 218 6.33E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 200 3.1E-6 T 14-10-2018 PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 Pfam PF00106 short chain dehydrogenase 8 188 1.7E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_24230 7b5a240f0bb5081798009186a7a9d190 233 Gene3D G3DSA:3.40.50.720 6 232 8.2E-54 T 14-10-2018 PACID_15830 e7d4c2ce75b5a2d909c27d29115b2fc2 78 Gene3D G3DSA:1.10.260.40 5 68 7.5E-11 T 14-10-2018 PACID_15830 e7d4c2ce75b5a2d909c27d29115b2fc2 78 SUPERFAMILY SSF47413 7 66 1.26E-11 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_15830 e7d4c2ce75b5a2d909c27d29115b2fc2 78 SMART SM00530 8 64 1.5E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_15830 e7d4c2ce75b5a2d909c27d29115b2fc2 78 Pfam PF01381 Helix-turn-helix 17 63 9.6E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_29230 97751384f229a685e9eb26c1b0d2be3e 315 Pfam PF02574 Homocysteine S-methyltransferase 16 304 1.5E-70 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 PACID_29230 97751384f229a685e9eb26c1b0d2be3e 315 Gene3D G3DSA:3.20.20.330 6 306 1.0E-91 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 PACID_29230 97751384f229a685e9eb26c1b0d2be3e 315 PIRSF PIRSF037505 8 243 1.6E-5 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 PACID_29230 97751384f229a685e9eb26c1b0d2be3e 315 PIRSF PIRSF037505 272 313 0.8 T 14-10-2018 IPR017226 Betaine-homocysteine S-methyltransferase, BHMT GO:0005737|GO:0008270|GO:0009086|GO:0047150 Reactome: R-HSA-1614635 PACID_29230 97751384f229a685e9eb26c1b0d2be3e 315 SUPERFAMILY SSF82282 8 310 1.96E-73 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 PACID_01590 304c11d9e0d843c8f77f630e22f213c5 577 SUPERFAMILY SSF55874 468 573 1.23E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_01590 304c11d9e0d843c8f77f630e22f213c5 577 Pfam PF07730 Histidine kinase 378 442 2.1E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_01590 304c11d9e0d843c8f77f630e22f213c5 577 Gene3D G3DSA:3.30.565.10 453 573 1.0E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_20750 b772e400897ad2695e9dc8a0fa94f5b2 320 PIRSF PIRSF016838 1 313 2.2E-96 T 14-10-2018 IPR028349 Protein PafC PACID_20750 b772e400897ad2695e9dc8a0fa94f5b2 320 Pfam PF13280 WYL domain 150 308 5.2E-19 T 14-10-2018 IPR026881 WYL domain PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 Pfam PF00318 Ribosomal protein S2 9 225 3.0E-95 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 5.4E-105 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 PRINTS PR00395 Ribosomal protein S2 signature 176 187 3.6E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.6E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.6E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 PRINTS PR00395 Ribosomal protein S2 signature 159 176 3.6E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 PRINTS PR00395 Ribosomal protein S2 signature 197 211 3.6E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.6E-37 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 SUPERFAMILY SSF52313 7 229 3.4E-89 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 Gene3D G3DSA:1.10.287.610 97 153 2.4E-87 T 14-10-2018 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 226 41.332 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_22070 5b3b9da0c9fff02060a0159097e77b10 304 Gene3D G3DSA:3.40.50.10490 10 215 2.4E-87 T 14-10-2018 PACID_32060 eec7bdbb88a416d09f49344c8141a89b 648 Gene3D G3DSA:1.20.1560.10 32 367 5.0E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_32060 eec7bdbb88a416d09f49344c8141a89b 648 SUPERFAMILY SSF90123 52 363 3.01E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_32060 eec7bdbb88a416d09f49344c8141a89b 648 Pfam PF00005 ABC transporter 396 542 1.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_32060 eec7bdbb88a416d09f49344c8141a89b 648 SMART SM00382 405 590 2.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_32060 eec7bdbb88a416d09f49344c8141a89b 648 Gene3D G3DSA:3.40.50.300 376 623 2.2E-74 T 14-10-2018 PACID_32060 eec7bdbb88a416d09f49344c8141a89b 648 Pfam PF00664 ABC transporter transmembrane region 65 334 1.9E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_32060 eec7bdbb88a416d09f49344c8141a89b 648 SUPERFAMILY SSF52540 369 612 2.66E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_32060 eec7bdbb88a416d09f49344c8141a89b 648 ProSitePatterns PS00211 ABC transporters family signature. 516 530 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_16690 107c9b03682f922c850b3d96c4b90d9e 206 SUPERFAMILY SSF55821 1 203 2.44E-58 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PACID_16690 107c9b03682f922c850b3d96c4b90d9e 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 5.8E-55 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 PACID_16690 107c9b03682f922c850b3d96c4b90d9e 206 Pfam PF01300 Telomere recombination 23 198 1.5E-41 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 PACID_16690 107c9b03682f922c850b3d96c4b90d9e 206 Gene3D G3DSA:3.90.870.10 1 206 4.5E-59 T 14-10-2018 PACID_05930 5783bbbd6f3605c3f743dad78970eab7 457 PIRSF PIRSF006060 1 454 2.5E-59 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_05930 5783bbbd6f3605c3f743dad78970eab7 457 Gene3D G3DSA:1.20.1740.10 19 456 9.8E-54 T 14-10-2018 PACID_05930 5783bbbd6f3605c3f743dad78970eab7 457 Pfam PF13520 Amino acid permease 37 426 2.1E-33 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_01400 106de47ddb8617017f2cb834864b33e4 565 Gene3D G3DSA:3.30.1510.10 131 249 3.1E-190 T 14-10-2018 PACID_01400 106de47ddb8617017f2cb834864b33e4 565 SUPERFAMILY SSF52540 6 563 2.92E-219 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01400 106de47ddb8617017f2cb834864b33e4 565 Gene3D G3DSA:3.10.410.10 453 541 1.6E-34 T 14-10-2018 PACID_01400 106de47ddb8617017f2cb834864b33e4 565 Pfam PF01268 Formate--tetrahydrofolate ligase 5 565 1.9E-242 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PACID_01400 106de47ddb8617017f2cb834864b33e4 565 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 330 341 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PACID_01400 106de47ddb8617017f2cb834864b33e4 565 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 3 565 44.251 T 14-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PACID_01400 106de47ddb8617017f2cb834864b33e4 565 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 105 115 - T 14-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PACID_01400 106de47ddb8617017f2cb834864b33e4 565 Gene3D G3DSA:3.40.50.300 6 437 3.1E-190 T 14-10-2018 PACID_29280 24d8a6076bdab18c121e1dc71efa5233 180 SUPERFAMILY SSF54518 9 168 6.02E-8 T 14-10-2018 IPR025659 Tubby-like, C-terminal PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 SUPERFAMILY SSF48019 362 478 8.25E-15 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 119 477 4.6E-119 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 SUPERFAMILY SSF52540 145 335 3.39E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 Pfam PF13177 DNA polymerase III, delta subunit 134 292 7.8E-37 T 14-10-2018 PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 Gene3D G3DSA:1.10.8.60 122 345 4.4E-98 T 14-10-2018 PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 SMART SM00382 151 299 2.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 349 476 3.0E-9 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 Gene3D G3DSA:3.40.50.300 127 293 4.4E-98 T 14-10-2018 PACID_06030 d8a9c1ac39614f3fda7826d45b8c8959 980 Gene3D G3DSA:1.20.272.10 368 479 5.9E-5 T 14-10-2018 PACID_05820 3afa6e9676ec25994e1506a8319d441d 424 Pfam PF13439 Glycosyltransferase Family 4 69 231 5.2E-13 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_05820 3afa6e9676ec25994e1506a8319d441d 424 Gene3D G3DSA:3.40.50.2000 67 415 4.7E-46 T 14-10-2018 PACID_05820 3afa6e9676ec25994e1506a8319d441d 424 Pfam PF00534 Glycosyl transferases group 1 246 398 2.3E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_05820 3afa6e9676ec25994e1506a8319d441d 424 SUPERFAMILY SSF53756 70 421 1.83E-43 T 14-10-2018 PACID_05820 3afa6e9676ec25994e1506a8319d441d 424 Gene3D G3DSA:3.40.50.2000 229 402 4.7E-46 T 14-10-2018 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 149 166 9.3E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 207 220 9.3E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 238 257 9.3E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 578 9.3E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 175 191 9.3E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 517 535 9.3E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 PRINTS PR00985 Leucyl-tRNA synthetase signature 589 599 9.3E-48 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 26 841 21.167 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 442 646 1.6E-14 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Gene3D G3DSA:3.90.740.10 251 440 5.8E-248 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 SUPERFAMILY SSF47323 655 841 5.23E-26 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 28 603 2.2E-238 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Gene3D G3DSA:3.10.20.590 780 842 5.9E-16 T 14-10-2018 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Gene3D G3DSA:1.10.730.10 628 778 8.7E-30 T 14-10-2018 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 SUPERFAMILY SSF52374 27 646 5.4E-136 T 14-10-2018 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 SUPERFAMILY SSF50677 249 440 1.47E-48 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Pfam PF09334 tRNA synthetases class I (M) 63 204 1.2E-22 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Gene3D G3DSA:3.40.50.620 57 603 5.8E-248 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Pfam PF08264 Anticodon-binding domain of tRNA 681 802 8.0E-15 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 244 424 1.9E-62 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 PACID_13770 53a5ddd32270241a30897fa345b60bc9 842 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 66 75 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_12070 ddf02716d2677f09503b146f48e50797 604 Gene3D G3DSA:3.40.50.300 265 521 3.3E-55 T 14-10-2018 PACID_12070 ddf02716d2677f09503b146f48e50797 604 Gene3D G3DSA:3.40.50.300 2 237 3.1E-56 T 14-10-2018 PACID_12070 ddf02716d2677f09503b146f48e50797 604 SUPERFAMILY SSF52540 8 205 4.26E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_12070 ddf02716d2677f09503b146f48e50797 604 ProSitePatterns PS00211 ABC transporters family signature. 126 140 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_12070 ddf02716d2677f09503b146f48e50797 604 ProSitePatterns PS00211 ABC transporters family signature. 417 431 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_12070 ddf02716d2677f09503b146f48e50797 604 SUPERFAMILY SSF52540 279 490 4.98E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_12070 ddf02716d2677f09503b146f48e50797 604 Pfam PF00005 ABC transporter 23 154 5.0E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_12070 ddf02716d2677f09503b146f48e50797 604 Pfam PF00005 ABC transporter 307 445 2.9E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_12070 ddf02716d2677f09503b146f48e50797 604 SMART SM00382 314 498 7.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_12070 ddf02716d2677f09503b146f48e50797 604 SMART SM00382 32 202 1.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_14360 cf8ca08cd18f63bcfe982e3701671b23 451 SUPERFAMILY SSF51338 3 448 1.1E-5 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_14360 cf8ca08cd18f63bcfe982e3701671b23 451 Gene3D G3DSA:3.20.20.140 16 409 2.5E-90 T 14-10-2018 PACID_14360 cf8ca08cd18f63bcfe982e3701671b23 451 SUPERFAMILY SSF51556 15 405 2.08E-25 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_14360 cf8ca08cd18f63bcfe982e3701671b23 451 Pfam PF07969 Amidohydrolase family 4 447 2.8E-50 T 14-10-2018 IPR013108 Amidohydrolase 3 PACID_14360 cf8ca08cd18f63bcfe982e3701671b23 451 Gene3D G3DSA:2.30.40.10 3 424 2.5E-90 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_14360 cf8ca08cd18f63bcfe982e3701671b23 451 Gene3D G3DSA:3.10.310.70 34 136 2.5E-90 T 14-10-2018 PACID_18420 308a6288fc809feb862c54372ce58770 251 SUPERFAMILY SSF54292 1 116 5.11E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PACID_18420 308a6288fc809feb862c54372ce58770 251 Gene3D G3DSA:1.10.1060.10 131 243 3.5E-13 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_18420 308a6288fc809feb862c54372ce58770 251 SUPERFAMILY SSF46548 134 240 9.77E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_18420 308a6288fc809feb862c54372ce58770 251 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 120 2.7E-23 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18420 308a6288fc809feb862c54372ce58770 251 Gene3D G3DSA:3.10.20.30 1 116 6.6E-24 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PACID_18420 308a6288fc809feb862c54372ce58770 251 Pfam PF13183 4Fe-4S dicluster domain 156 227 4.2E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_18420 308a6288fc809feb862c54372ce58770 251 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PACID_18420 308a6288fc809feb862c54372ce58770 251 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 159 170 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 Gene3D G3DSA:2.60.40.1180 618 743 2.1E-31 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 Pfam PF16874 Glycosyl hydrolase family 36 C-terminal domain 636 736 3.3E-23 T 14-10-2018 IPR031705 Glycosyl hydrolase family 36, C-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 Pfam PF02065 Melibiase 275 620 1.4E-148 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 Gene3D G3DSA:2.70.98.60 1 294 5.9E-101 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 SUPERFAMILY SSF51445 310 653 6.73E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 16 270 1.0E-82 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PRINTS PR00743 Glycosyl hydrolase family 36 signature 505 521 4.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PRINTS PR00743 Glycosyl hydrolase family 36 signature 277 297 4.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PRINTS PR00743 Glycosyl hydrolase family 36 signature 393 415 4.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PRINTS PR00743 Glycosyl hydrolase family 36 signature 315 329 4.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PRINTS PR00743 Glycosyl hydrolase family 36 signature 343 358 4.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PRINTS PR00743 Glycosyl hydrolase family 36 signature 451 466 4.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PRINTS PR00743 Glycosyl hydrolase family 36 signature 226 241 4.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PRINTS PR00743 Glycosyl hydrolase family 36 signature 530 546 4.3E-56 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 ProSitePatterns PS00512 Alpha-galactosidase signature. 344 359 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 Gene3D G3DSA:3.20.20.70 296 617 6.0E-133 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_07300 49107eddd57f95e4a07c9c04841380a0 744 PIRSF PIRSF005536 1 737 2.9E-260 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06130 394c0d017377c2b7d68b7b607dbc6392 267 ProSitePatterns PS01229 Hypothetical cof family signature 2. 214 236 - T 14-10-2018 PACID_06130 394c0d017377c2b7d68b7b607dbc6392 267 Gene3D G3DSA:3.30.1240.10 80 189 9.1E-47 T 14-10-2018 PACID_06130 394c0d017377c2b7d68b7b607dbc6392 267 Gene3D G3DSA:3.40.50.1000 2 261 9.1E-47 T 14-10-2018 IPR023214 HAD superfamily PACID_06130 394c0d017377c2b7d68b7b607dbc6392 267 SUPERFAMILY SSF56784 2 264 7.13E-47 T 14-10-2018 IPR036412 HAD-like superfamily PACID_06130 394c0d017377c2b7d68b7b607dbc6392 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 259 2.4E-37 T 14-10-2018 PACID_06130 394c0d017377c2b7d68b7b607dbc6392 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 2 233 1.3E-18 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 Gene3D G3DSA:1.10.730.10 682 887 1.3E-48 T 14-10-2018 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 SUPERFAMILY SSF47323 698 954 1.44E-48 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 Pfam PF08264 Anticodon-binding domain of tRNA 749 894 1.7E-28 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 601 610 2.7E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 240 263 2.7E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 57 68 2.7E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 559 572 2.7E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 434 449 2.7E-27 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 SUPERFAMILY SSF50677 216 436 9.42E-42 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 34 670 1.6E-164 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 Gene3D G3DSA:3.40.50.620 31 668 1.5E-220 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 Hamap MF_02003 Isoleucine--tRNA ligase [ileS]. 19 1107 13.54 T 14-10-2018 IPR023586 Isoleucine-tRNA ligase, type 2 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 Gene3D G3DSA:3.90.740.10 213 440 1.5E-220 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 22 902 4.2E-256 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 PACID_06150 6d33ce1a78950f3b337d6cba01c9885d 1108 SUPERFAMILY SSF52374 21 691 5.9E-117 T 14-10-2018 PACID_27830 3f88a81e9790ef8eea1fb80488e022ea 316 Pfam PF04954 Siderophore-interacting protein 158 312 9.4E-34 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain PACID_27830 3f88a81e9790ef8eea1fb80488e022ea 316 SUPERFAMILY SSF63380 7 141 3.63E-5 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PACID_27830 3f88a81e9790ef8eea1fb80488e022ea 316 Gene3D G3DSA:3.40.50.80 154 316 1.9E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PACID_27830 3f88a81e9790ef8eea1fb80488e022ea 316 Gene3D G3DSA:2.40.30.10 2 143 7.8E-31 T 14-10-2018 PACID_27830 3f88a81e9790ef8eea1fb80488e022ea 316 Pfam PF08021 Siderophore-interacting FAD-binding domain 20 143 7.2E-30 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting PACID_00740 25e3ef0ac2f075ce2090b83ab3e8a09f 437 Pfam PF00872 Transposase, Mutator family 39 402 4.7E-118 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_00740 25e3ef0ac2f075ce2090b83ab3e8a09f 437 ProSitePatterns PS01007 Transposases, Mutator family, signature. 263 287 - T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_27120 31dd78e14a14ab2b9fedb485a7c95843 363 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 13 356 39.705 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27120 31dd78e14a14ab2b9fedb485a7c95843 363 Pfam PF00586 AIR synthase related protein, N-terminal domain 68 170 6.7E-15 T 14-10-2018 IPR016188 PurM-like, N-terminal domain PACID_27120 31dd78e14a14ab2b9fedb485a7c95843 363 SUPERFAMILY SSF56042 180 346 1.94E-50 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PACID_27120 31dd78e14a14ab2b9fedb485a7c95843 363 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 14 343 2.8E-120 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27120 31dd78e14a14ab2b9fedb485a7c95843 363 Gene3D G3DSA:3.90.650.10 180 360 9.4E-56 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PACID_27120 31dd78e14a14ab2b9fedb485a7c95843 363 SUPERFAMILY SSF55326 14 177 3.89E-44 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PACID_27120 31dd78e14a14ab2b9fedb485a7c95843 363 Pfam PF02769 AIR synthase related protein, C-terminal domain 185 347 1.4E-29 T 14-10-2018 IPR010918 PurM-like, C-terminal domain PACID_27120 31dd78e14a14ab2b9fedb485a7c95843 363 Gene3D G3DSA:3.30.1330.10 12 178 9.4E-60 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PACID_17920 96df8a001d111d07ef59f494e3702cc5 452 Gene3D G3DSA:3.40.50.800 351 436 5.2E-14 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily PACID_17920 96df8a001d111d07ef59f494e3702cc5 452 PIRSF PIRSF001549 1 443 2.6E-90 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 PACID_17920 96df8a001d111d07ef59f494e3702cc5 452 Gene3D G3DSA:3.30.930.10 1 346 4.0E-85 T 14-10-2018 PACID_17920 96df8a001d111d07ef59f494e3702cc5 452 SUPERFAMILY SSF55681 5 341 1.13E-59 T 14-10-2018 PACID_17920 96df8a001d111d07ef59f494e3702cc5 452 Pfam PF13393 Histidyl-tRNA synthetase 9 336 1.3E-27 T 14-10-2018 PACID_17920 96df8a001d111d07ef59f494e3702cc5 452 Pfam PF03129 Anticodon binding domain 356 431 7.1E-8 T 14-10-2018 IPR004154 Anticodon-binding PACID_17920 96df8a001d111d07ef59f494e3702cc5 452 SUPERFAMILY SSF52954 353 433 1.31E-12 T 14-10-2018 PACID_17920 96df8a001d111d07ef59f494e3702cc5 452 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 432 1.2E-102 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 PACID_14800 340c8b54b1c141f0e4e30918b2aa41ac 446 Pfam PF13614 AAA domain 196 324 2.6E-6 T 14-10-2018 IPR025669 AAA domain PACID_14800 340c8b54b1c141f0e4e30918b2aa41ac 446 SUPERFAMILY SSF52540 196 427 3.3E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14800 340c8b54b1c141f0e4e30918b2aa41ac 446 Gene3D G3DSA:3.40.50.300 195 426 2.4E-24 T 14-10-2018 PACID_29780 3604aa1002d6c81309fac9bcbc58f22d 359 Gene3D G3DSA:3.20.20.100 5 347 1.9E-104 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_29780 3604aa1002d6c81309fac9bcbc58f22d 359 PRINTS PR00069 Aldo-keto reductase signature 148 165 2.5E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_29780 3604aa1002d6c81309fac9bcbc58f22d 359 PRINTS PR00069 Aldo-keto reductase signature 117 135 2.5E-5 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_29780 3604aa1002d6c81309fac9bcbc58f22d 359 Pfam PF00248 Aldo/keto reductase family 20 323 2.2E-69 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_29780 3604aa1002d6c81309fac9bcbc58f22d 359 SUPERFAMILY SSF51430 12 326 2.88E-86 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_24600 745513788c3cf8482d1605b2247a78fd 284 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 120 1.3E-33 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 205 234 5.6E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 5.6E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 5.6E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 5.6E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 5.6E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 5.6E-57 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 Gene3D G3DSA:3.40.50.10860 8 276 6.9E-104 T 14-10-2018 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 1.8E-59 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 Gene3D G3DSA:3.40.50.720 6 259 6.9E-104 T 14-10-2018 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 SUPERFAMILY SSF53223 1 121 2.01E-35 T 14-10-2018 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 34.599 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 PACID_24600 745513788c3cf8482d1605b2247a78fd 284 SUPERFAMILY SSF51735 124 282 5.17E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_00210 733c874a0b09b742de5ca78750c6bae9 267 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_00210 733c874a0b09b742de5ca78750c6bae9 267 Gene3D G3DSA:3.40.50.300 1 230 2.0E-64 T 14-10-2018 PACID_00210 733c874a0b09b742de5ca78750c6bae9 267 SMART SM00382 30 211 5.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_00210 733c874a0b09b742de5ca78750c6bae9 267 Pfam PF00005 ABC transporter 21 162 2.6E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_00210 733c874a0b09b742de5ca78750c6bae9 267 SUPERFAMILY SSF52540 3 232 8.74E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_30270 c32bb6fa4e3e2ce0cb043dbe44842d11 312 Pfam PF04198 Putative sugar-binding domain 58 310 8.0E-61 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 PACID_30270 c32bb6fa4e3e2ce0cb043dbe44842d11 312 Gene3D G3DSA:3.40.50.1360 54 312 1.2E-68 T 14-10-2018 PACID_30270 c32bb6fa4e3e2ce0cb043dbe44842d11 312 Gene3D G3DSA:1.10.10.60 2 53 7.6E-17 T 14-10-2018 PACID_30270 c32bb6fa4e3e2ce0cb043dbe44842d11 312 SUPERFAMILY SSF100950 62 310 5.44E-62 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_23690 0f5fe7eae575355e6e7d803960d722a8 515 SUPERFAMILY SSF56672 21 231 4.63E-23 T 14-10-2018 PACID_23690 0f5fe7eae575355e6e7d803960d722a8 515 Gene3D G3DSA:1.10.150.20 165 224 2.8E-9 T 14-10-2018 PACID_23690 0f5fe7eae575355e6e7d803960d722a8 515 Pfam PF00817 impB/mucB/samB family 20 141 5.2E-8 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 PACID_23690 0f5fe7eae575355e6e7d803960d722a8 515 Gene3D G3DSA:3.30.70.270 65 230 2.8E-9 T 14-10-2018 PACID_23690 0f5fe7eae575355e6e7d803960d722a8 515 Gene3D G3DSA:2.30.40.20 29 64 2.8E-9 T 14-10-2018 PACID_19860 c4153ec7946bb1d56cc5d5a94b653c3b 331 SUPERFAMILY SSF52540 117 323 1.86E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_19860 c4153ec7946bb1d56cc5d5a94b653c3b 331 Gene3D G3DSA:3.40.50.300 102 268 4.3E-45 T 14-10-2018 PACID_19860 c4153ec7946bb1d56cc5d5a94b653c3b 331 Gene3D G3DSA:1.10.40.50 269 331 8.4E-8 T 14-10-2018 PACID_19860 c4153ec7946bb1d56cc5d5a94b653c3b 331 Pfam PF03193 RsgA GTPase 101 268 1.9E-45 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 PACID_19860 c4153ec7946bb1d56cc5d5a94b653c3b 331 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 331 28.148 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 PACID_19860 c4153ec7946bb1d56cc5d5a94b653c3b 331 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 325 6.9E-49 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 PACID_32390 81a9d3d60f265faeeb0d24ad3e37eb83 127 SUPERFAMILY SSF52821 17 122 2.49E-19 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PACID_32390 81a9d3d60f265faeeb0d24ad3e37eb83 127 Gene3D G3DSA:3.40.250.10 17 119 3.1E-17 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PACID_32390 81a9d3d60f265faeeb0d24ad3e37eb83 127 Pfam PF00581 Rhodanese-like domain 28 114 5.1E-10 T 14-10-2018 IPR001763 Rhodanese-like domain PACID_32390 81a9d3d60f265faeeb0d24ad3e37eb83 127 SMART SM00450 17 118 1.4E-8 T 14-10-2018 IPR001763 Rhodanese-like domain PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 Gene3D G3DSA:3.30.70.100 9 68 4.3E-15 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 SUPERFAMILY SSF81665 210 706 2.22E-12 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 SUPERFAMILY SSF81653 235 329 4.05E-23 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 Gene3D G3DSA:3.40.50.1000 411 679 3.1E-81 T 14-10-2018 IPR023214 HAD superfamily PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 Gene3D G3DSA:3.40.1110.10 441 559 3.1E-81 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 205 710 1.9E-77 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 Pfam PF00403 Heavy-metal-associated domain 11 65 1.7E-11 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 432 438 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 152 729 3.0E-164 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 650 662 4.3E-23 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 563 4.3E-23 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 627 646 4.3E-23 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 430 444 4.3E-23 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 280 294 4.3E-23 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 574 584 4.3E-23 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 Gene3D G3DSA:2.70.150.20 224 335 3.9E-32 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 SUPERFAMILY SSF56784 428 727 4.38E-50 T 14-10-2018 IPR036412 HAD-like superfamily PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 ProSitePatterns PS01047 Heavy-metal-associated domain. 13 41 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 ProSitePatterns PS01229 Hypothetical cof family signature 2. 627 649 - T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 Pfam PF00122 E1-E2 ATPase 231 407 4.0E-49 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 Pfam PF00702 haloacid dehalogenase-like hydrolase 426 641 2.6E-44 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 195 730 1.7E-142 T 14-10-2018 PACID_12100 0d5f497d72f7a1c712e0155619260c44 733 SUPERFAMILY SSF55008 9 68 6.02E-15 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PACID_14330 4402f194be1e22a567b581c761422801 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 115 125 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site PACID_14330 4402f194be1e22a567b581c761422801 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 153 20.961 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PACID_14330 4402f194be1e22a567b581c761422801 155 SUPERFAMILY SSF55486 2 150 9.03E-35 T 14-10-2018 PACID_14330 4402f194be1e22a567b581c761422801 155 Gene3D G3DSA:3.40.390.30 2 153 3.4E-35 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 PACID_14330 4402f194be1e22a567b581c761422801 155 Pfam PF02130 Uncharacterized protein family UPF0054 22 143 3.0E-34 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PACID_14330 4402f194be1e22a567b581c761422801 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 35 145 1.4E-28 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 PACID_09910 1bbcbe541549226ea05073756b9404dc 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 75 4.4E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09910 1bbcbe541549226ea05073756b9404dc 227 SUPERFAMILY SSF48498 99 209 5.34E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_09910 1bbcbe541549226ea05073756b9404dc 227 SUPERFAMILY SSF46689 18 95 2.1E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_09910 1bbcbe541549226ea05073756b9404dc 227 Gene3D G3DSA:1.10.357.10 15 218 1.3E-44 T 14-10-2018 PACID_09910 1bbcbe541549226ea05073756b9404dc 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 44 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09910 1bbcbe541549226ea05073756b9404dc 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 52 75 1.5E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09910 1bbcbe541549226ea05073756b9404dc 227 ProSitePatterns PS01081 TetR-type HTH domain signature. 43 73 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PACID_11050 acd87b2f1ba0cb44f52d6fdc741becd3 503 Gene3D G3DSA:1.20.1250.20 33 468 4.7E-62 T 14-10-2018 PACID_11050 acd87b2f1ba0cb44f52d6fdc741becd3 503 Pfam PF00083 Sugar (and other) transporter 38 450 9.1E-38 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_11050 acd87b2f1ba0cb44f52d6fdc741becd3 503 SUPERFAMILY SSF103473 29 456 1.57E-65 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_11050 acd87b2f1ba0cb44f52d6fdc741becd3 503 ProSitePatterns PS00217 Sugar transport proteins signature 2. 144 169 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_11050 acd87b2f1ba0cb44f52d6fdc741becd3 503 ProSitePatterns PS00216 Sugar transport proteins signature 1. 324 341 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_23250 93c2d261ed086f5970530ffaaddcc67f 445 Pfam PF13367 Protease prsW family 96 297 8.2E-30 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 Gene3D G3DSA:3.30.70.580 73 231 4.0E-52 T 14-10-2018 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 109 123 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 Pfam PF00849 RNA pseudouridylate synthase 71 203 2.4E-19 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 Pfam PF01479 S4 domain 10 54 1.2E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 SUPERFAMILY SSF55120 70 238 1.09E-40 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 Gene3D G3DSA:3.30.70.1560 133 223 4.0E-52 T 14-10-2018 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 75 235 1.8E-45 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 Gene3D G3DSA:3.10.290.10 4 65 4.7E-23 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 SUPERFAMILY SSF55174 9 96 3.03E-19 T 14-10-2018 PACID_20790 21f5dfc2c270161154fc7dd8524c0e8e 247 SMART SM00363 9 68 6.2E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_14150 3431020d78750995de04392983e80f97 712 Pfam PF00270 DEAD/DEAH box helicase 25 195 3.9E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_14150 3431020d78750995de04392983e80f97 712 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 145 154 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site PACID_14150 3431020d78750995de04392983e80f97 712 Pfam PF00271 Helicase conserved C-terminal domain 243 345 3.1E-14 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_14150 3431020d78750995de04392983e80f97 712 Gene3D G3DSA:3.40.50.300 3 208 1.9E-53 T 14-10-2018 PACID_14150 3431020d78750995de04392983e80f97 712 SUPERFAMILY SSF52540 69 366 5.49E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14150 3431020d78750995de04392983e80f97 712 SMART SM00487 19 217 2.0E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_14150 3431020d78750995de04392983e80f97 712 SMART SM00490 265 346 9.3E-22 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_14150 3431020d78750995de04392983e80f97 712 SUPERFAMILY SSF53271 581 707 2.96E-8 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_14150 3431020d78750995de04392983e80f97 712 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 22 364 3.2E-66 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 PACID_17230 19cdcbc4008bf8716e7ff6e176101167 285 Gene3D G3DSA:3.30.465.10 102 221 8.7E-31 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PACID_17230 19cdcbc4008bf8716e7ff6e176101167 285 Gene3D G3DSA:3.30.43.10 24 100 2.0E-12 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 PACID_17230 19cdcbc4008bf8716e7ff6e176101167 285 SUPERFAMILY SSF56176 8 201 3.74E-34 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PACID_17230 19cdcbc4008bf8716e7ff6e176101167 285 ProSitePatterns PS00862 Oxygen oxidoreductases covalent FAD-binding site. 49 82 - T 14-10-2018 IPR006093 Oxygen oxidoreductase covalent FAD-binding site GO:0016491|GO:0055114 PACID_17230 19cdcbc4008bf8716e7ff6e176101167 285 Pfam PF01565 FAD binding domain 50 182 3.3E-16 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PACID_21670 5549f06930855bf39f1642e594f110ca 246 SUPERFAMILY SSF55347 105 215 6.54E-38 T 14-10-2018 PACID_21670 5549f06930855bf39f1642e594f110ca 246 PIRSF PIRSF000161 1 246 1.1E-61 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_21670 5549f06930855bf39f1642e594f110ca 246 Gene3D G3DSA:3.40.50.720 4 233 7.2E-81 T 14-10-2018 PACID_21670 5549f06930855bf39f1642e594f110ca 246 SUPERFAMILY SSF51735 1 131 1.21E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_21670 5549f06930855bf39f1642e594f110ca 246 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 126 143 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_21670 5549f06930855bf39f1642e594f110ca 246 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 43 243 2.7E-53 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_21670 5549f06930855bf39f1642e594f110ca 246 Gene3D G3DSA:3.30.360.10 105 213 7.2E-81 T 14-10-2018 PACID_21670 5549f06930855bf39f1642e594f110ca 246 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 244 28.491 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_21670 5549f06930855bf39f1642e594f110ca 246 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 107 234 3.0E-29 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_21670 5549f06930855bf39f1642e594f110ca 246 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 104 1.7E-25 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_08200 7b0e261372e32d8782394f049dfdd983 127 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 27 109 2.0E-20 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 PACID_08200 7b0e261372e32d8782394f049dfdd983 127 SUPERFAMILY SSF141530 5 125 9.81E-27 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 PACID_08200 7b0e261372e32d8782394f049dfdd983 127 Gene3D G3DSA:2.40.33.40 2 126 1.5E-24 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 PACID_08200 7b0e261372e32d8782394f049dfdd983 127 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 6 122 2.8E-27 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 PACID_11040 9e69fabaa8c24d82199183cadf1b7572 294 Pfam PF13602 Zinc-binding dehydrogenase 153 289 3.1E-20 T 14-10-2018 PACID_11040 9e69fabaa8c24d82199183cadf1b7572 294 SUPERFAMILY SSF50129 1 114 2.83E-26 T 14-10-2018 IPR011032 GroES-like superfamily PACID_11040 9e69fabaa8c24d82199183cadf1b7572 294 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 110 131 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PACID_11040 9e69fabaa8c24d82199183cadf1b7572 294 Gene3D G3DSA:3.40.50.720 90 260 2.6E-77 T 14-10-2018 PACID_11040 9e69fabaa8c24d82199183cadf1b7572 294 SMART SM00829 4 290 2.8E-18 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_11040 9e69fabaa8c24d82199183cadf1b7572 294 Gene3D G3DSA:3.90.180.10 1 288 2.6E-77 T 14-10-2018 PACID_11040 9e69fabaa8c24d82199183cadf1b7572 294 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 1 55 3.1E-6 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_11040 9e69fabaa8c24d82199183cadf1b7572 294 SUPERFAMILY SSF51735 82 261 6.61E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 SUPERFAMILY SSF54909 62 150 2.68E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 4.3E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 4.3E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 4.3E-12 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 Pfam PF01037 Lrp/AsnC ligand binding domain 67 140 1.6E-18 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 Gene3D G3DSA:1.10.10.10 2 53 8.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 SUPERFAMILY SSF46785 1 60 3.06E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 SMART SM00344 1 110 1.0E-35 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 Pfam PF13404 AsnC-type helix-turn-helix domain 2 42 6.2E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_13480 376d6b6b65827511dc0ef7af64ec7040 152 Gene3D G3DSA:3.30.70.920 54 137 1.0E-19 T 14-10-2018 PACID_32420 53500e9887f9d82eed75e59ea5fb379c 267 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 203 219 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 PACID_32420 53500e9887f9d82eed75e59ea5fb379c 267 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 171 178 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 PACID_32420 53500e9887f9d82eed75e59ea5fb379c 267 Gene3D G3DSA:3.20.20.150 2 265 7.4E-57 T 14-10-2018 PACID_32420 53500e9887f9d82eed75e59ea5fb379c 267 SMART SM00518 5 265 1.7E-47 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 PACID_32420 53500e9887f9d82eed75e59ea5fb379c 267 SUPERFAMILY SSF51658 17 265 1.31E-54 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_32420 53500e9887f9d82eed75e59ea5fb379c 267 Pfam PF01261 Xylose isomerase-like TIM barrel 21 227 1.9E-25 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 SUPERFAMILY SSF53244 320 463 2.9E-43 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 Pfam PF08245 Mur ligase middle domain 120 300 4.5E-25 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 Gene3D G3DSA:3.40.50.720 17 102 3.4E-28 T 14-10-2018 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 Pfam PF02875 Mur ligase family, glutamate ligase domain 323 406 2.2E-23 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 SUPERFAMILY SSF51984 17 103 4.84E-23 T 14-10-2018 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 15 468 34.631 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 Pfam PF01225 Mur ligase family, catalytic domain 18 113 2.5E-23 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 Gene3D G3DSA:3.40.1190.10 104 318 4.5E-61 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 18 459 2.2E-131 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 Gene3D G3DSA:3.90.190.20 319 470 2.7E-51 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_12860 50c9b76261b9dcc25f8dc0053e389005 484 SUPERFAMILY SSF53623 101 318 1.12E-52 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 29 295 3.2E-64 T 14-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 353 731 2.1E-115 T 14-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 SUPERFAMILY SSF48208 301 784 3.57E-115 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 Gene3D G3DSA:2.70.98.40 17 297 9.8E-60 T 14-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 Gene3D G3DSA:2.60.420.10 719 788 9.7E-20 T 14-10-2018 PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 SUPERFAMILY SSF74650 18 296 1.16E-69 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 736 785 2.0E-12 T 14-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 Gene3D G3DSA:1.50.10.10 348 718 1.3E-126 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 PACID_19190 6e6a529fce15215dc0fc1320b584d705 841 PIRSF PIRSF036289 14 797 4.4E-192 T 14-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase PACID_06140 74515f55cfd80268075562cc168608d1 272 Gene3D G3DSA:3.40.50.1000 3 261 5.1E-53 T 14-10-2018 IPR023214 HAD superfamily PACID_06140 74515f55cfd80268075562cc168608d1 272 SUPERFAMILY SSF56784 2 264 7.96E-51 T 14-10-2018 IPR036412 HAD-like superfamily PACID_06140 74515f55cfd80268075562cc168608d1 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 2 13 - T 14-10-2018 PACID_06140 74515f55cfd80268075562cc168608d1 272 Gene3D G3DSA:3.30.1240.10 79 189 5.1E-53 T 14-10-2018 PACID_06140 74515f55cfd80268075562cc168608d1 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 260 1.4E-44 T 14-10-2018 PACID_06140 74515f55cfd80268075562cc168608d1 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 232 7.0E-21 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PACID_10470 c201165e6acb350f95623e101a13dc81 84 PIRSF PIRSF006488 5 84 1.9E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PACID_10470 c201165e6acb350f95623e101a13dc81 84 Gene3D G3DSA:1.10.287.1040 15 83 4.2E-13 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 PACID_10470 c201165e6acb350f95623e101a13dc81 84 SUPERFAMILY SSF116842 17 76 6.02E-16 T 14-10-2018 PACID_10470 c201165e6acb350f95623e101a13dc81 84 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 18 60 1.0E-13 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PACID_10470 c201165e6acb350f95623e101a13dc81 84 Pfam PF02609 Exonuclease VII small subunit 21 72 5.2E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PACID_10470 c201165e6acb350f95623e101a13dc81 84 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 20 80 12.898 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PACID_10470 c201165e6acb350f95623e101a13dc81 84 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 21 73 4.9E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 SUPERFAMILY SSF55326 410 578 9.68E-48 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Gene3D G3DSA:3.30.1330.10 49 203 3.9E-120 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 749 1.4E-236 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 SUPERFAMILY SSF56042 583 750 1.5E-35 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Pfam PF00586 AIR synthase related protein, N-terminal domain 97 198 6.6E-23 T 14-10-2018 IPR016188 PurM-like, N-terminal domain PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Pfam PF00586 AIR synthase related protein, N-terminal domain 455 573 2.6E-19 T 14-10-2018 IPR016188 PurM-like, N-terminal domain PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 PIRSF PIRSF001587 7 752 1.6E-268 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 SUPERFAMILY SSF56042 210 440 7.92E-47 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Gene3D G3DSA:3.90.650.10 35 376 3.9E-120 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Gene3D G3DSA:3.30.1330.10 401 576 1.3E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 SUPERFAMILY SSF55326 42 203 1.48E-45 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Gene3D G3DSA:3.90.650.10 581 752 6.3E-36 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Pfam PF02769 AIR synthase related protein, C-terminal domain 212 363 2.3E-30 T 14-10-2018 IPR010918 PurM-like, C-terminal domain PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Pfam PF02769 AIR synthase related protein, C-terminal domain 587 727 3.6E-16 T 14-10-2018 IPR010918 PurM-like, C-terminal domain PACID_27200 70ec12b5a9073ffbdcc78348638588ea 752 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 752 281.94 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_32050 3aa519117b48b183e3ab0eb3f90b282e 616 Pfam PF00005 ABC transporter 393 540 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_32050 3aa519117b48b183e3ab0eb3f90b282e 616 ProSitePatterns PS00211 ABC transporters family signature. 512 526 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_32050 3aa519117b48b183e3ab0eb3f90b282e 616 SUPERFAMILY SSF52540 365 609 1.67E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_32050 3aa519117b48b183e3ab0eb3f90b282e 616 Gene3D G3DSA:1.20.1560.10 32 357 8.3E-83 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_32050 3aa519117b48b183e3ab0eb3f90b282e 616 Gene3D G3DSA:3.40.50.300 366 614 1.3E-86 T 14-10-2018 PACID_32050 3aa519117b48b183e3ab0eb3f90b282e 616 Pfam PF00664 ABC transporter transmembrane region 55 329 1.3E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_32050 3aa519117b48b183e3ab0eb3f90b282e 616 SUPERFAMILY SSF90123 43 362 4.19E-77 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_32050 3aa519117b48b183e3ab0eb3f90b282e 616 SMART SM00382 400 586 3.5E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 Gene3D G3DSA:3.10.20.30 48 354 1.3E-138 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 SUPERFAMILY SSF52540 3 295 7.02E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 357 41.31 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.7E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.7E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.7E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.7E-33 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 355 2.2E-127 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 Gene3D G3DSA:1.10.150.300 113 196 1.3E-138 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 Gene3D G3DSA:3.40.50.300 3 272 1.3E-138 T 14-10-2018 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 SUPERFAMILY SSF81271 273 354 9.81E-35 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 Pfam PF06071 Protein of unknown function (DUF933) 273 354 4.6E-38 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.1E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_10540 06a4af14d3d2dc243b8be21da6bd8bb0 363 PIRSF PIRSF006641 1 357 4.2E-136 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 SUPERFAMILY SSF82679 130 233 8.37E-37 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 Gene3D G3DSA:3.30.70.940 125 241 2.6E-40 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 SMART SM00738 128 236 3.9E-40 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 Pfam PF02357 Transcription termination factor nusG 130 232 5.4E-25 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 PRINTS PR00338 Transcription termination factor NUSG signature 183 195 3.4E-10 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 PRINTS PR00338 Transcription termination factor NUSG signature 274 289 3.4E-10 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 PRINTS PR00338 Transcription termination factor NUSG signature 292 308 3.4E-10 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 128 316 22.317 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 SUPERFAMILY SSF50104 262 316 1.4E-14 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 131 316 7.4E-53 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 PACID_25970 b2fe346b5104c266cb86e5327f12d070 316 Gene3D G3DSA:2.30.30.30 255 316 5.7E-20 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 PIRSF PIRSF000124 1 430 2.8E-54 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 SUPERFAMILY SSF52413 310 422 8.37E-15 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 SUPERFAMILY SSF48179 214 305 1.24E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 SUPERFAMILY SSF51735 1 193 9.47E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 1.7E-36 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 SMART SM00984 323 416 4.1E-13 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 215 299 5.5E-18 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 PIRSF PIRSF500136 1 429 2.1E-101 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 Gene3D G3DSA:3.40.50.720 213 433 6.7E-47 T 14-10-2018 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 Gene3D G3DSA:3.40.50.720 1 199 1.2E-55 T 14-10-2018 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 416 1.4E-9 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PACID_04850 7cde22289c2df6b956dccc226ca6e686 433 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 411 1.6E-95 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PACID_25550 fe6ae6071b642792d1bef6aaad46bc07 135 Pfam PF00410 Ribosomal protein S8 5 135 4.4E-49 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25550 fe6ae6071b642792d1bef6aaad46bc07 135 SUPERFAMILY SSF56047 3 135 2.22E-42 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25550 fe6ae6071b642792d1bef6aaad46bc07 135 Gene3D G3DSA:3.30.1370.30 4 80 1.4E-26 T 14-10-2018 PACID_25550 fe6ae6071b642792d1bef6aaad46bc07 135 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 135 31.32 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25550 fe6ae6071b642792d1bef6aaad46bc07 135 ProSitePatterns PS00053 Ribosomal protein S8 signature. 105 122 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25550 fe6ae6071b642792d1bef6aaad46bc07 135 Gene3D G3DSA:3.30.1490.10 81 135 3.1E-25 T 14-10-2018 PACID_04870 88115619cd3697177dd7b25bca9d135e 377 Gene3D G3DSA:3.40.50.2000 6 180 9.5E-7 T 14-10-2018 PACID_04870 88115619cd3697177dd7b25bca9d135e 377 SUPERFAMILY SSF53756 6 361 5.38E-41 T 14-10-2018 PACID_04870 88115619cd3697177dd7b25bca9d135e 377 Pfam PF00534 Glycosyl transferases group 1 189 344 1.6E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_04870 88115619cd3697177dd7b25bca9d135e 377 Pfam PF13579 Glycosyl transferase 4-like domain 29 147 5.2E-7 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_04870 88115619cd3697177dd7b25bca9d135e 377 Gene3D G3DSA:3.40.50.2000 181 352 3.1E-25 T 14-10-2018 PACID_05390 d8e06586525d6cb86989b21a99e83b37 452 Pfam PF13416 Bacterial extracellular solute-binding protein 71 379 5.3E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_05390 d8e06586525d6cb86989b21a99e83b37 452 Gene3D G3DSA:3.40.190.10 165 428 1.2E-107 T 14-10-2018 PACID_05390 d8e06586525d6cb86989b21a99e83b37 452 SUPERFAMILY SSF53850 57 437 7.44E-62 T 14-10-2018 PACID_05390 d8e06586525d6cb86989b21a99e83b37 452 Gene3D G3DSA:3.40.190.10 71 370 1.2E-107 T 14-10-2018 PACID_28940 566b7e0f5d905d565e656defadad7d82 112 Gene3D G3DSA:1.10.1220.10 71 111 2.2E-5 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 PACID_28940 566b7e0f5d905d565e656defadad7d82 112 SUPERFAMILY SSF47598 73 110 2.85E-7 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PACID_28940 566b7e0f5d905d565e656defadad7d82 112 Pfam PF01402 Ribbon-helix-helix protein, copG family 73 109 2.3E-6 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_20610 000bb7784f2f15d4d045a388d0464204 510 Pfam PF15975 Flotillin 379 465 1.0E-11 T 14-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 PACID_20610 000bb7784f2f15d4d045a388d0464204 510 SMART SM00244 26 207 6.9E-4 T 14-10-2018 IPR001107 Band 7 domain PACID_20610 000bb7784f2f15d4d045a388d0464204 510 SUPERFAMILY SSF117892 73 210 1.7E-26 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PACID_20610 000bb7784f2f15d4d045a388d0464204 510 Gene3D G3DSA:3.30.479.30 82 196 1.1E-28 T 14-10-2018 PACID_20610 000bb7784f2f15d4d045a388d0464204 510 Pfam PF01145 SPFH domain / Band 7 family 31 223 3.0E-22 T 14-10-2018 IPR001107 Band 7 domain PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 Gene3D G3DSA:3.30.300.20 237 353 2.0E-37 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 Pfam PF07650 KH domain 260 342 8.3E-16 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 SUPERFAMILY SSF52540 57 271 6.26E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 TIGRFAM TIGR00436 era: GTP-binding protein Era 54 336 5.6E-64 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 58 218 9.0E-16 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 Gene3D G3DSA:3.40.50.300 51 236 1.4E-38 T 14-10-2018 PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 Hamap MF_00367 GTPase Era [era]. 51 353 32.631 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 Pfam PF01926 50S ribosome-binding GTPase 56 123 1.6E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_14350 1142bbc7ca32a6b1cac819e8053fd4e8 353 SUPERFAMILY SSF54814 234 353 9.16E-34 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 722 801 1.4E-26 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 578 596 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 SMART SM01086 722 815 2.9E-38 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 548 566 4.6E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 655 669 4.6E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 622 640 4.6E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 593 611 4.6E-38 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Pfam PF02151 UvrB/uvrC motif 425 456 2.8E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Pfam PF07724 AAA domain (Cdc48 subfamily) 543 716 3.0E-51 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Gene3D G3DSA:3.40.50.300 161 350 4.5E-69 T 14-10-2018 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 SMART SM00382 207 351 3.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 SMART SM00382 544 723 9.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 142 3.5E-17 T 14-10-2018 IPR004176 Clp, N-terminal PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 16 68 9.8E-18 T 14-10-2018 IPR004176 Clp, N-terminal PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Gene3D G3DSA:1.10.1780.10 1 148 1.1E-61 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 212 331 8.2E-12 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Gene3D G3DSA:4.10.860.10 416 474 4.7E-45 T 14-10-2018 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 SUPERFAMILY SSF52540 169 474 2.78E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Gene3D G3DSA:3.40.50.300 497 721 2.6E-82 T 14-10-2018 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Gene3D G3DSA:1.10.8.60 722 823 2.6E-29 T 14-10-2018 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 Gene3D G3DSA:1.10.8.60 354 488 4.7E-45 T 14-10-2018 PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 SUPERFAMILY SSF52540 493 804 6.81E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28400 f7b89c0c1381a0bc0f568bbb8ffbf60d 841 SUPERFAMILY SSF81923 3 151 1.18E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 PACID_23760 4705d6fb29c564389b82c8e9a2f86cde 116 PRINTS PR00297 10kDa chaperonin signature 42 63 1.7E-6 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_23760 4705d6fb29c564389b82c8e9a2f86cde 116 PRINTS PR00297 10kDa chaperonin signature 68 80 1.7E-6 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_23760 4705d6fb29c564389b82c8e9a2f86cde 116 PRINTS PR00297 10kDa chaperonin signature 89 102 1.7E-6 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_23760 4705d6fb29c564389b82c8e9a2f86cde 116 PRINTS PR00297 10kDa chaperonin signature 16 31 1.7E-6 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_23760 4705d6fb29c564389b82c8e9a2f86cde 116 SMART SM00883 15 102 1.8E-18 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_23760 4705d6fb29c564389b82c8e9a2f86cde 116 Pfam PF00166 Chaperonin 10 Kd subunit 15 101 9.2E-16 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_23760 4705d6fb29c564389b82c8e9a2f86cde 116 Gene3D G3DSA:2.30.33.40 13 103 9.6E-13 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 PACID_23760 4705d6fb29c564389b82c8e9a2f86cde 116 SUPERFAMILY SSF50129 15 101 4.55E-16 T 14-10-2018 IPR011032 GroES-like superfamily PACID_06710 a6bb0325c7d85cfd671b3b936c389a25 337 SUPERFAMILY SSF161098 95 323 1.83E-15 T 14-10-2018 IPR035906 MetI-like superfamily PACID_06710 a6bb0325c7d85cfd671b3b936c389a25 337 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 337 6.1E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_14840 fc62f5a06512756517274a2195e8cea5 90 Pfam PF12728 Helix-turn-helix domain 28 73 1.5E-6 T 14-10-2018 PACID_23290 b2c14f14451dde837e8641f40eaff2ae 245 SUPERFAMILY SSF53335 23 212 2.05E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_23290 b2c14f14451dde837e8641f40eaff2ae 245 Gene3D G3DSA:3.40.50.150 14 201 7.2E-62 T 14-10-2018 PACID_23290 b2c14f14451dde837e8641f40eaff2ae 245 Pfam PF13489 Methyltransferase domain 19 154 1.7E-14 T 14-10-2018 PACID_23290 b2c14f14451dde837e8641f40eaff2ae 245 Gene3D G3DSA:1.10.150.290 142 228 7.2E-62 T 14-10-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 PACID_29140 a64ed42319be909ca99aa7ae5d8e7dec 151 Gene3D G3DSA:3.30.1330.40 1 151 9.9E-55 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PACID_29140 a64ed42319be909ca99aa7ae5d8e7dec 151 Pfam PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease 5 150 3.9E-32 T 14-10-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like PACID_29140 a64ed42319be909ca99aa7ae5d8e7dec 151 SUPERFAMILY SSF55298 1 151 3.77E-52 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.6E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.6E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.6E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.6E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.6E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PIRSF PIRSF000126 1 259 6.6E-59 T 14-10-2018 PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 Pfam PF00106 short chain dehydrogenase 5 189 6.2E-39 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 Gene3D G3DSA:3.40.50.720 2 259 4.4E-57 T 14-10-2018 PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 2.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 2.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_32430 cf0acb1f7ac5465376e3341b232d0a88 274 SUPERFAMILY SSF51735 4 259 1.28E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_25950 21417d88fcad49bb278c7f770aeed2b3 232 Gene3D G3DSA:3.40.50.790 67 158 3.1E-80 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich PACID_25950 21417d88fcad49bb278c7f770aeed2b3 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 120 138 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25950 21417d88fcad49bb278c7f770aeed2b3 232 SUPERFAMILY SSF56808 7 224 7.19E-81 T 14-10-2018 IPR023674 Ribosomal protein L1-like PACID_25950 21417d88fcad49bb278c7f770aeed2b3 232 Pfam PF00687 Ribosomal protein L1p/L10e family 33 219 1.8E-53 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein PACID_25950 21417d88fcad49bb278c7f770aeed2b3 232 Gene3D G3DSA:3.30.190.20 29 224 3.1E-80 T 14-10-2018 PACID_25950 21417d88fcad49bb278c7f770aeed2b3 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 1 228 42.114 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PACID_25950 21417d88fcad49bb278c7f770aeed2b3 232 PIRSF PIRSF002155 1 225 4.6E-74 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25950 21417d88fcad49bb278c7f770aeed2b3 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 2 224 3.1E-98 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 PACID_33830 28383a9919588dd4c2a3df361d8b675a 498 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 291 489 1.8E-35 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 PACID_33830 28383a9919588dd4c2a3df361d8b675a 498 SMART SM00813 291 489 2.3E-58 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 PACID_33830 28383a9919588dd4c2a3df361d8b675a 498 SUPERFAMILY SSF51011 369 496 1.37E-23 T 14-10-2018 PACID_33830 28383a9919588dd4c2a3df361d8b675a 498 Gene3D G3DSA:2.60.40.1180 6 494 2.6E-199 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_33830 28383a9919588dd4c2a3df361d8b675a 498 Gene3D G3DSA:3.20.20.80 18 381 2.6E-199 T 14-10-2018 PACID_33830 28383a9919588dd4c2a3df361d8b675a 498 SUPERFAMILY SSF51445 17 380 4.89E-103 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_12620 9a19299688663e868b3468474894150f 292 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 145 5.7E-29 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 PACID_12620 9a19299688663e868b3468474894150f 292 SUPERFAMILY SSF51735 1 145 2.25E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_12620 9a19299688663e868b3468474894150f 292 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 160 270 2.7E-25 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_12620 9a19299688663e868b3468474894150f 292 Gene3D G3DSA:1.10.1040.10 160 289 4.0E-48 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_12620 9a19299688663e868b3468474894150f 292 SUPERFAMILY SSF48179 158 288 6.05E-40 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_12620 9a19299688663e868b3468474894150f 292 SMART SM01350 160 287 5.2E-6 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_12620 9a19299688663e868b3468474894150f 292 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 50 79 8.1E-28 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_12620 9a19299688663e868b3468474894150f 292 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 224 251 8.1E-28 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_12620 9a19299688663e868b3468474894150f 292 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 1 15 8.1E-28 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_12620 9a19299688663e868b3468474894150f 292 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 103 128 8.1E-28 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_12620 9a19299688663e868b3468474894150f 292 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 149 177 8.1E-28 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 PACID_12620 9a19299688663e868b3468474894150f 292 Gene3D G3DSA:3.40.50.720 1 159 7.5E-37 T 14-10-2018 PACID_12620 9a19299688663e868b3468474894150f 292 TIGRFAM TIGR00872 gnd_rel: 6-phosphogluconate dehydrogenase (decarboxylating) 1 290 1.7E-93 T 14-10-2018 IPR004849 6-phosphogluconate dehydrogenase, YqeC-type GO:0055114 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 106 666 1.7E-133 T 14-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 Pfam PF07670 Nucleoside recognition 529 669 1.5E-21 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 Pfam PF07670 Nucleoside recognition 366 458 3.6E-11 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 Pfam PF07664 Ferrous iron transport protein B C terminus 471 523 9.0E-13 T 14-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 Gene3D G3DSA:3.40.50.300 35 242 1.6E-34 T 14-10-2018 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 SUPERFAMILY SSF52540 35 226 1.46E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 Pfam PF02421 Ferrous iron transport protein B 105 219 1.5E-27 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 Pfam PF02421 Ferrous iron transport protein B 38 81 6.1E-13 T 14-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 59 77 1.3E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_23880 a2c83760e0eab1f63387c8da3aac8ae3 698 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 38 58 1.3E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_01800 8d64a38eb686596270818d9d6c6fd430 281 SUPERFAMILY SSF51430 7 269 3.01E-74 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_01800 8d64a38eb686596270818d9d6c6fd430 281 Pfam PF00248 Aldo/keto reductase family 14 267 1.4E-54 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_01800 8d64a38eb686596270818d9d6c6fd430 281 Gene3D G3DSA:3.20.20.100 2 278 1.4E-85 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_01800 8d64a38eb686596270818d9d6c6fd430 281 PRINTS PR00069 Aldo-keto reductase signature 94 112 2.4E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_01800 8d64a38eb686596270818d9d6c6fd430 281 PRINTS PR00069 Aldo-keto reductase signature 203 227 2.4E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_01800 8d64a38eb686596270818d9d6c6fd430 281 PRINTS PR00069 Aldo-keto reductase signature 38 62 2.4E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_01800 8d64a38eb686596270818d9d6c6fd430 281 PRINTS PR00069 Aldo-keto reductase signature 125 142 2.4E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_11510 2d9abbea28287962c43f857af65821aa 384 SUPERFAMILY SSF52540 8 214 1.01E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23350 a1bb15180591f7425514d3bc27d16979 306 SUPERFAMILY SSF47413 18 70 5.0E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_23350 a1bb15180591f7425514d3bc27d16979 306 Pfam PF13560 Helix-turn-helix domain 20 74 3.2E-13 T 14-10-2018 PACID_23350 a1bb15180591f7425514d3bc27d16979 306 SMART SM00530 2 72 1.3E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_23350 a1bb15180591f7425514d3bc27d16979 306 Gene3D G3DSA:1.10.260.40 9 73 1.8E-8 T 14-10-2018 PACID_23350 a1bb15180591f7425514d3bc27d16979 306 Gene3D G3DSA:3.30.450.180 101 264 4.0E-9 T 14-10-2018 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 ProSitePatterns PS00438 Catalase proximal active site signature. 63 79 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 357 365 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 Pfam PF06628 Catalase-related immune-responsive 444 507 1.9E-23 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 SUPERFAMILY SSF52317 538 682 2.75E-9 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 Gene3D G3DSA:3.40.50.880 537 694 2.6E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 Pfam PF00199 Catalase 27 411 2.0E-164 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 Gene3D G3DSA:2.40.180.10 1 436 2.6E-189 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 PRINTS PR00067 Catalase signature 312 339 8.6E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 PRINTS PR00067 Catalase signature 102 120 8.6E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 PRINTS PR00067 Catalase signature 142 160 8.6E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 PRINTS PR00067 Catalase signature 123 140 8.6E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 PRINTS PR00067 Catalase signature 40 63 8.6E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 PRINTS PR00067 Catalase signature 344 370 8.6E-68 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 PIRSF PIRSF038927 2 696 1.0E-279 T 14-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 SMART SM01060 27 415 1.4E-244 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 Gene3D G3DSA:1.20.1370.20 441 536 2.1E-30 T 14-10-2018 PACID_29570 13c03649e20ba3c27826439cd3129d5b 697 SUPERFAMILY SSF56634 15 515 3.4E-200 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 PACID_10870 2b5f4713f6ef721f51b87af356961620 454 Pfam PF00872 Transposase, Mutator family 45 415 1.3E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_11260 760fd62789d1443df1c358e10eba7310 272 SUPERFAMILY SSF52540 20 267 6.66E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_11260 760fd62789d1443df1c358e10eba7310 272 Gene3D G3DSA:3.40.50.300 18 271 1.2E-75 T 14-10-2018 PACID_11260 760fd62789d1443df1c358e10eba7310 272 Pfam PF00005 ABC transporter 36 197 5.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_11260 760fd62789d1443df1c358e10eba7310 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_11260 760fd62789d1443df1c358e10eba7310 272 PIRSF PIRSF039085 17 272 1.1E-118 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PACID_11260 760fd62789d1443df1c358e10eba7310 272 SMART SM00382 45 252 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_27040 d2464733ef3f6e1f8b6484d17532c746 351 SUPERFAMILY SSF52540 25 273 5.1E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27040 d2464733ef3f6e1f8b6484d17532c746 351 Gene3D G3DSA:3.40.50.300 21 273 6.8E-58 T 14-10-2018 PACID_27040 d2464733ef3f6e1f8b6484d17532c746 351 Pfam PF00005 ABC transporter 47 202 1.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_27040 d2464733ef3f6e1f8b6484d17532c746 351 ProSitePatterns PS00211 ABC transporters family signature. 174 188 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_27040 d2464733ef3f6e1f8b6484d17532c746 351 SMART SM00382 51 298 1.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_27040 d2464733ef3f6e1f8b6484d17532c746 351 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 250 272 9.8E-9 T 14-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal PACID_00220 9cb7eb054a7dddf64aabb45d41cc8dc7 136 Pfam PF06304 Protein of unknown function (DUF1048) 13 113 6.9E-28 T 14-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 PACID_00220 9cb7eb054a7dddf64aabb45d41cc8dc7 136 Gene3D G3DSA:1.10.1900.10 2 116 2.6E-37 T 14-10-2018 PACID_00220 9cb7eb054a7dddf64aabb45d41cc8dc7 136 SUPERFAMILY SSF158560 4 113 2.62E-27 T 14-10-2018 PACID_07150 f4d6366f4ef52264cc764efe21dbd697 525 Gene3D G3DSA:3.30.70.1450 273 346 8.9E-7 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PACID_07150 f4d6366f4ef52264cc764efe21dbd697 525 SUPERFAMILY SSF116726 271 340 3.66E-10 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PACID_07150 f4d6366f4ef52264cc764efe21dbd697 525 SUPERFAMILY SSF116726 207 256 1.05E-5 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PACID_07150 f4d6366f4ef52264cc764efe21dbd697 525 Pfam PF06826 Predicted Permease Membrane Region 355 523 1.1E-25 T 14-10-2018 IPR006512 YidE/YbjL duplication PACID_07150 f4d6366f4ef52264cc764efe21dbd697 525 Pfam PF06826 Predicted Permease Membrane Region 16 169 6.1E-23 T 14-10-2018 IPR006512 YidE/YbjL duplication PACID_07150 f4d6366f4ef52264cc764efe21dbd697 525 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 359 506 7.9E-28 T 14-10-2018 IPR006512 YidE/YbjL duplication PACID_07150 f4d6366f4ef52264cc764efe21dbd697 525 Pfam PF02080 TrkA-C domain 273 340 6.7E-9 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PACID_27960 b2d6305133f5997069a47480c89ea73f 252 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 27 231 7.2E-42 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 SUPERFAMILY SSF53067 6 260 1.2E-86 T 14-10-2018 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 SUPERFAMILY SSF53067 260 503 6.47E-82 T 14-10-2018 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 PIRSF PIRSF000538 4 508 7.2E-162 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 502 1.1E-216 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 257 2.2E-72 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 138 150 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 Hamap MF_00186 Glycerol kinase [glpK]. 4 503 54.448 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 Gene3D G3DSA:3.30.420.40 4 258 8.6E-105 T 14-10-2018 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 368 388 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 267 456 5.0E-65 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_33710 7cea7ea51f51bbff0a3878a993406287 509 Gene3D G3DSA:3.30.420.40 259 509 8.7E-95 T 14-10-2018 PACID_22100 48834a1381cc35ee541a77d2fa40012a 350 Gene3D G3DSA:3.40.50.300 58 268 9.0E-22 T 14-10-2018 PACID_22100 48834a1381cc35ee541a77d2fa40012a 350 Pfam PF07728 AAA domain (dynein-related subfamily) 78 219 7.5E-30 T 14-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 PACID_22100 48834a1381cc35ee541a77d2fa40012a 350 SUPERFAMILY SSF52540 57 320 7.93E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 Gene3D G3DSA:2.40.50.100 1 98 4.7E-27 T 14-10-2018 PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 TIGRFAM TIGR02927 SucB_Actino: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase 2 451 1.2E-197 T 14-10-2018 IPR014276 2-oxoglutarate dehydrogenase, E2 component KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 Gene3D G3DSA:3.30.559.10 199 449 5.2E-83 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 Pfam PF00364 Biotin-requiring enzyme 4 76 1.9E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 Gene3D G3DSA:4.10.320.10 128 180 3.6E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 SUPERFAMILY SSF52777 208 445 8.9E-80 T 14-10-2018 PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 SUPERFAMILY SSF51230 1 96 1.23E-27 T 14-10-2018 IPR011053 Single hybrid motif PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 218 445 1.1E-75 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 Pfam PF02817 e3 binding domain 139 174 2.4E-16 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 PACID_12130 e7bcefe2c040b3489d80aeee4caaff3e 452 SUPERFAMILY SSF47005 133 178 9.94E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PACID_30170 08614108f7728de4193eb24c445d53a0 212 SUPERFAMILY SSF53697 21 204 2.45E-39 T 14-10-2018 PACID_30170 08614108f7728de4193eb24c445d53a0 212 Gene3D G3DSA:3.40.50.10490 13 205 3.3E-49 T 14-10-2018 PACID_30170 08614108f7728de4193eb24c445d53a0 212 Pfam PF01380 SIS domain 52 178 5.7E-22 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 SUPERFAMILY SSF53067 2 168 2.36E-26 T 14-10-2018 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 SUPERFAMILY SSF53067 176 351 3.84E-30 T 14-10-2018 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 Pfam PF00012 Hsp70 protein 3 355 1.4E-36 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 Gene3D G3DSA:3.30.420.40 3 348 7.8E-68 T 14-10-2018 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 Gene3D G3DSA:3.90.640.10 214 278 7.8E-68 T 14-10-2018 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 182 195 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 PRINTS PR00301 70kDa heat shock protein signature 336 356 2.9E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 PRINTS PR00301 70kDa heat shock protein signature 1 14 2.9E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 PRINTS PR00301 70kDa heat shock protein signature 305 321 2.9E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 PRINTS PR00301 70kDa heat shock protein signature 188 198 2.9E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 PRINTS PR00301 70kDa heat shock protein signature 459 475 2.9E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 PRINTS PR00301 70kDa heat shock protein signature 124 144 2.9E-15 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 PACID_16760 3896c86f32088ec8cd78c7819c8a46ae 500 Gene3D G3DSA:3.30.420.40 175 338 7.8E-68 T 14-10-2018 PACID_01620 2f7ab24e3245d25a5e90fd95414cfe5d 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 163 235 9.0E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_01620 2f7ab24e3245d25a5e90fd95414cfe5d 239 SUPERFAMILY SSF52172 11 135 1.85E-40 T 14-10-2018 IPR011006 CheY-like superfamily PACID_01620 2f7ab24e3245d25a5e90fd95414cfe5d 239 Gene3D G3DSA:3.40.50.2300 2 137 4.0E-36 T 14-10-2018 PACID_01620 2f7ab24e3245d25a5e90fd95414cfe5d 239 SMART SM00448 10 120 1.0E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_01620 2f7ab24e3245d25a5e90fd95414cfe5d 239 Gene3D G3DSA:1.10.10.10 141 238 2.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_01620 2f7ab24e3245d25a5e90fd95414cfe5d 239 Pfam PF00072 Response regulator receiver domain 12 121 4.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_01620 2f7ab24e3245d25a5e90fd95414cfe5d 239 SMART SM00862 160 236 5.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_01620 2f7ab24e3245d25a5e90fd95414cfe5d 239 SUPERFAMILY SSF46894 136 236 9.35E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_09750 3cd29af32f6ffd1b36678b6f60369e10 425 Pfam PF07730 Histidine kinase 238 302 4.4E-11 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_09750 3cd29af32f6ffd1b36678b6f60369e10 425 SUPERFAMILY SSF55874 325 422 1.57E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_09750 3cd29af32f6ffd1b36678b6f60369e10 425 Gene3D G3DSA:3.30.565.10 304 423 3.5E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_09750 3cd29af32f6ffd1b36678b6f60369e10 425 Pfam PF13796 Putative sensor 21 209 4.6E-33 T 14-10-2018 IPR025828 Putative sensor domain PACID_29340 7013439d055562eee38985e58a65c2e8 373 Gene3D G3DSA:3.40.50.300 32 370 1.8E-102 T 14-10-2018 PACID_29340 7013439d055562eee38985e58a65c2e8 373 SUPERFAMILY SSF52540 34 285 3.59E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_29340 7013439d055562eee38985e58a65c2e8 373 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 265 332 6.9E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_29340 7013439d055562eee38985e58a65c2e8 373 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 264 354 1.9E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_29340 7013439d055562eee38985e58a65c2e8 373 Pfam PF00005 ABC transporter 62 213 2.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_29340 7013439d055562eee38985e58a65c2e8 373 ProSitePatterns PS00211 ABC transporters family signature. 186 200 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_29340 7013439d055562eee38985e58a65c2e8 373 SMART SM00382 70 263 1.4E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_23930 bd3c38493fa7468171d82554b6b0fabd 91 Pfam PF00216 Bacterial DNA-binding protein 1 89 7.3E-31 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PACID_23930 bd3c38493fa7468171d82554b6b0fabd 91 SMART SM00411 1 90 7.9E-35 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 PACID_23930 bd3c38493fa7468171d82554b6b0fabd 91 Gene3D G3DSA:4.10.520.10 1 91 4.2E-33 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PACID_23930 bd3c38493fa7468171d82554b6b0fabd 91 SUPERFAMILY SSF47729 1 90 6.62E-29 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 PACID_02520 d25256fd1d69b08b6fddaf24625cef80 566 PIRSF PIRSF002741 15 565 5.7E-75 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PACID_02520 d25256fd1d69b08b6fddaf24625cef80 566 Gene3D G3DSA:3.40.190.10 32 304 3.9E-54 T 14-10-2018 PACID_02520 d25256fd1d69b08b6fddaf24625cef80 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 96 476 7.9E-67 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PACID_02520 d25256fd1d69b08b6fddaf24625cef80 566 Gene3D G3DSA:3.10.105.10 305 531 3.3E-42 T 14-10-2018 PACID_02520 d25256fd1d69b08b6fddaf24625cef80 566 SUPERFAMILY SSF53850 50 561 3.08E-101 T 14-10-2018 PACID_04140 cbabe84bf6e3389cea992fb572304d93 412 PIRSF PIRSF033271 1 407 3.1E-138 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 PACID_04140 cbabe84bf6e3389cea992fb572304d93 412 Gene3D G3DSA:3.40.50.12020 1 176 2.3E-60 T 14-10-2018 PACID_04140 cbabe84bf6e3389cea992fb572304d93 412 Gene3D G3DSA:3.40.50.12030 187 404 5.2E-87 T 14-10-2018 PACID_04140 cbabe84bf6e3389cea992fb572304d93 412 Pfam PF06792 Uncharacterised protein family (UPF0261) 3 401 1.9E-162 T 14-10-2018 IPR008322 Uncharacterised protein family UPF0261 PACID_20560 cd1a78c6f2da90cf38b321ee7b4f9880 266 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 66 264 3.0E-71 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 PACID_20560 cd1a78c6f2da90cf38b321ee7b4f9880 266 Pfam PF10370 Domain of unknown function (DUF2437) 1 60 2.0E-17 T 14-10-2018 IPR018833 Domain of unknown function DUF2437 PACID_20560 cd1a78c6f2da90cf38b321ee7b4f9880 266 Gene3D G3DSA:3.90.850.10 43 265 1.6E-86 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PACID_20560 cd1a78c6f2da90cf38b321ee7b4f9880 266 SUPERFAMILY SSF56529 55 264 4.19E-81 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 PACID_25640 57bfcce9afd7526240107692aeac3e88 398 Gene3D G3DSA:3.40.190.10 1 394 1.6E-50 T 14-10-2018 PACID_25640 57bfcce9afd7526240107692aeac3e88 398 Pfam PF01547 Bacterial extracellular solute-binding protein 13 278 4.5E-17 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_25640 57bfcce9afd7526240107692aeac3e88 398 SUPERFAMILY SSF53850 1 388 2.24E-46 T 14-10-2018 PACID_29670 cf2de6010a1b35f4756f75ab4ba28846 260 Pfam PF13359 DDE superfamily endonuclease 104 253 3.2E-22 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain PACID_09280 af40e47c5f5593ea477299821bd87c89 131 PIRSF PIRSF000077 9 113 3.3E-26 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PACID_09280 af40e47c5f5593ea477299821bd87c89 131 Gene3D G3DSA:3.40.30.10 3 124 1.1E-27 T 14-10-2018 PACID_09280 af40e47c5f5593ea477299821bd87c89 131 SUPERFAMILY SSF52833 13 113 2.96E-29 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_09280 af40e47c5f5593ea477299821bd87c89 131 TIGRFAM TIGR01068 thioredoxin: thioredoxin 16 111 1.0E-29 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PACID_09280 af40e47c5f5593ea477299821bd87c89 131 PRINTS PR00421 Thioredoxin family signature 77 88 3.2E-6 T 14-10-2018 PACID_09280 af40e47c5f5593ea477299821bd87c89 131 PRINTS PR00421 Thioredoxin family signature 30 38 3.2E-6 T 14-10-2018 PACID_09280 af40e47c5f5593ea477299821bd87c89 131 PRINTS PR00421 Thioredoxin family signature 38 47 3.2E-6 T 14-10-2018 PACID_09280 af40e47c5f5593ea477299821bd87c89 131 Pfam PF00085 Thioredoxin 13 111 9.0E-23 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 PACID_18520 35496cd240f811b71687761793e911c0 276 PRINTS PR00046 Major sigma-70 factor signature 254 265 2.5E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_18520 35496cd240f811b71687761793e911c0 276 PRINTS PR00046 Major sigma-70 factor signature 113 121 2.5E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_18520 35496cd240f811b71687761793e911c0 276 PRINTS PR00046 Major sigma-70 factor signature 219 231 2.5E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_18520 35496cd240f811b71687761793e911c0 276 PRINTS PR00046 Major sigma-70 factor signature 89 102 2.5E-6 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_18520 35496cd240f811b71687761793e911c0 276 Gene3D G3DSA:1.20.140.160 139 269 5.9E-10 T 14-10-2018 PACID_18520 35496cd240f811b71687761793e911c0 276 Pfam PF04545 Sigma-70, region 4 216 266 2.6E-8 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PACID_18520 35496cd240f811b71687761793e911c0 276 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 60 267 1.3E-16 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PACID_18520 35496cd240f811b71687761793e911c0 276 SUPERFAMILY SSF88946 12 128 8.79E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PACID_18520 35496cd240f811b71687761793e911c0 276 Gene3D G3DSA:1.20.120.1810 30 132 1.1E-16 T 14-10-2018 PACID_18520 35496cd240f811b71687761793e911c0 276 Pfam PF04542 Sigma-70 region 2 69 125 3.3E-9 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PACID_18520 35496cd240f811b71687761793e911c0 276 SUPERFAMILY SSF88659 197 269 7.48E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 Gene3D G3DSA:3.10.290.10 90 186 6.1E-76 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 201 2.0E-78 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 1.5E-28 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 SMART SM00363 91 155 2.2E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 Pfam PF01479 S4 domain 92 138 1.2E-21 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 201 35.052 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 Gene3D G3DSA:1.10.1050.10 6 201 6.1E-76 T 14-10-2018 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 SMART SM01390 3 90 1.1E-43 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 ProSitePatterns PS00632 Ribosomal protein S4 signature. 89 113 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25350 a8a23b84ccf816babc133d2e6222b391 201 SUPERFAMILY SSF55174 3 201 1.23E-68 T 14-10-2018 PACID_11990 5a77fbb9e98d5c784d69409c564dbf83 101 Gene3D G3DSA:1.10.260.40 2 99 6.2E-31 T 14-10-2018 PACID_11990 5a77fbb9e98d5c784d69409c564dbf83 101 SMART SM00530 17 72 1.4E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_11990 5a77fbb9e98d5c784d69409c564dbf83 101 Pfam PF01381 Helix-turn-helix 20 68 8.3E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_11990 5a77fbb9e98d5c784d69409c564dbf83 101 SUPERFAMILY SSF47413 13 94 8.04E-25 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_11990 5a77fbb9e98d5c784d69409c564dbf83 101 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 8 83 1.2E-29 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 PACID_09950 4b8a616a9841f87ee2c30feff9c30abe 205 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 179 1.7E-18 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain PACID_09950 4b8a616a9841f87ee2c30feff9c30abe 205 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 8 177 9.5E-44 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PACID_09950 4b8a616a9841f87ee2c30feff9c30abe 205 SUPERFAMILY SSF50715 4 185 3.31E-47 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_09950 4b8a616a9841f87ee2c30feff9c30abe 205 Pfam PF01386 Ribosomal L25p family 7 92 2.4E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PACID_09950 4b8a616a9841f87ee2c30feff9c30abe 205 Gene3D G3DSA:2.40.240.10 2 95 6.8E-24 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_09950 4b8a616a9841f87ee2c30feff9c30abe 205 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 5 180 25.741 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 PACID_09950 4b8a616a9841f87ee2c30feff9c30abe 205 Gene3D G3DSA:2.170.120.20 96 180 8.6E-18 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal PACID_09950 4b8a616a9841f87ee2c30feff9c30abe 205 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 8 95 2.0E-35 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 PACID_10980 83c2fc3116da21d48b7f3dadd3c546c1 162 Gene3D G3DSA:1.10.10.10 99 156 1.2E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_10980 83c2fc3116da21d48b7f3dadd3c546c1 162 Gene3D G3DSA:1.10.1740.10 2 94 8.4E-15 T 14-10-2018 PACID_10980 83c2fc3116da21d48b7f3dadd3c546c1 162 Pfam PF04542 Sigma-70 region 2 11 78 5.2E-13 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PACID_10980 83c2fc3116da21d48b7f3dadd3c546c1 162 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 7 154 2.9E-15 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PACID_10980 83c2fc3116da21d48b7f3dadd3c546c1 162 SUPERFAMILY SSF88659 99 155 4.3E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_10980 83c2fc3116da21d48b7f3dadd3c546c1 162 SUPERFAMILY SSF88946 6 87 7.06E-16 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PACID_10980 83c2fc3116da21d48b7f3dadd3c546c1 162 Pfam PF08281 Sigma-70, region 4 100 150 4.5E-9 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_07540 b61ef3d60ff7af4038528be1cdf74ed1 231 SUPERFAMILY SSF116734 53 216 3.92E-24 T 14-10-2018 PACID_07540 b61ef3d60ff7af4038528be1cdf74ed1 231 SUPERFAMILY SSF116734 3 55 5.56E-6 T 14-10-2018 PACID_07540 b61ef3d60ff7af4038528be1cdf74ed1 231 Gene3D G3DSA:1.10.287.1120 13 212 5.6E-19 T 14-10-2018 PACID_07540 b61ef3d60ff7af4038528be1cdf74ed1 231 Gene3D G3DSA:3.90.220.20 50 172 5.6E-19 T 14-10-2018 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Pfam PF00009 Elongation factor Tu GTP binding domain 9 283 2.0E-66 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Gene3D G3DSA:3.30.70.240 607 677 7.7E-87 T 14-10-2018 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Pfam PF14492 Elongation Factor G, domain II 406 480 6.8E-34 T 14-10-2018 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Hamap MF_00054_B Elongation factor G [fusA]. 6 694 112.495 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Pfam PF03764 Elongation factor G, domain IV 481 601 2.7E-50 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 SUPERFAMILY SSF50447 266 406 1.04E-37 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 695 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Gene3D G3DSA:3.40.50.300 1 288 7.8E-112 T 14-10-2018 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Pfam PF00679 Elongation factor G C-terminus 604 689 2.0E-28 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Gene3D G3DSA:3.30.70.870 407 485 2.7E-32 T 14-10-2018 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Gene3D G3DSA:2.40.30.10 289 402 5.1E-44 T 14-10-2018 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Gene3D G3DSA:3.30.230.10 486 690 7.7E-87 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.6E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.6E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.6E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.6E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 PRINTS PR00315 GTP-binding elongation factor signature 130 139 4.6E-16 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 SUPERFAMILY SSF54211 481 602 1.06E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 SUPERFAMILY SSF52540 6 283 4.27E-102 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 SUPERFAMILY SSF54980 406 483 1.33E-24 T 14-10-2018 IPR035647 EF-G domain III/V-like PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 SMART SM00838 603 690 4.9E-48 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 SMART SM00889 482 601 1.3E-74 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 180 1.5E-35 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 SUPERFAMILY SSF54980 606 692 1.22E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like PACID_25850 a41449b3dbdb51598170ba054d64fb0b 698 Pfam PF03144 Elongation factor Tu domain 2 326 393 4.2E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PACID_28280 57343a950e13aeb0463a110a87837964 229 SUPERFAMILY SSF144091 9 189 1.31E-36 T 14-10-2018 PACID_28280 57343a950e13aeb0463a110a87837964 229 Gene3D G3DSA:1.20.1540.10 7 198 5.5E-39 T 14-10-2018 IPR035952 Rhomboid-like superfamily PACID_28280 57343a950e13aeb0463a110a87837964 229 Pfam PF01694 Rhomboid family 45 190 6.4E-29 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 Gene3D G3DSA:3.40.50.1700 292 534 3.9E-68 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 Gene3D G3DSA:2.60.40.10 543 651 3.7E-30 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 SMART SM01217 570 640 2.8E-27 T 14-10-2018 IPR026891 Fibronectin type III-like domain PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 304 533 2.5E-48 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 Gene3D G3DSA:3.20.20.300 5 291 3.4E-97 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 Pfam PF14310 Fibronectin type III-like domain 570 639 1.8E-22 T 14-10-2018 IPR026891 Fibronectin type III-like domain PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 206 223 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 PRINTS PR00133 Glycosyl hydrolase family 3 signature 206 224 2.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 PRINTS PR00133 Glycosyl hydrolase family 3 signature 105 121 2.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 PRINTS PR00133 Glycosyl hydrolase family 3 signature 136 152 2.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 PRINTS PR00133 Glycosyl hydrolase family 3 signature 29 45 2.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 PRINTS PR00133 Glycosyl hydrolase family 3 signature 59 78 2.8E-33 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 29 272 1.4E-49 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 SUPERFAMILY SSF51445 20 301 1.16E-81 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_19970 b34a766945788a5d1571d948dbc7a3e2 804 SUPERFAMILY SSF52279 304 536 6.8E-46 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PACID_08270 36a61dc16b1b671945113cd10dc0748f 177 Gene3D G3DSA:2.60.120.460 1 177 1.2E-32 T 14-10-2018 IPR035917 YjbQ-like superfamily PACID_08270 36a61dc16b1b671945113cd10dc0748f 177 Pfam PF01894 Uncharacterised protein family UPF0047 21 173 1.9E-32 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 PACID_08270 36a61dc16b1b671945113cd10dc0748f 177 SUPERFAMILY SSF111038 2 177 1.7E-22 T 14-10-2018 IPR035917 YjbQ-like superfamily PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 Gene3D G3DSA:1.20.1640.10 340 527 1.0E-7 T 14-10-2018 PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 Pfam PF02355 Protein export membrane protein 348 523 1.7E-11 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 Gene3D G3DSA:3.30.1360.200 186 339 2.3E-24 T 14-10-2018 PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 282 509 2.8E-57 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 Gene3D G3DSA:3.30.70.3400 39 125 1.4E-20 T 14-10-2018 PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 39 518 2.0E-99 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 Pfam PF07549 SecD/SecF GG Motif 38 56 5.6E-4 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 533 37.643 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 PACID_18000 7a809a497289e2ab2f3725587ff17e69 580 SUPERFAMILY SSF82866 325 528 9.55E-36 T 14-10-2018 PACID_33690 87bd2a26f52c1e906a2720dbc1ede869 194 Gene3D G3DSA:1.10.10.10 129 189 2.1E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_33690 87bd2a26f52c1e906a2720dbc1ede869 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 27 185 2.3E-27 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PACID_33690 87bd2a26f52c1e906a2720dbc1ede869 194 Gene3D G3DSA:1.10.1740.10 5 125 2.7E-29 T 14-10-2018 PACID_33690 87bd2a26f52c1e906a2720dbc1ede869 194 Pfam PF08281 Sigma-70, region 4 132 183 6.4E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_33690 87bd2a26f52c1e906a2720dbc1ede869 194 SUPERFAMILY SSF88659 126 187 7.1E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_33690 87bd2a26f52c1e906a2720dbc1ede869 194 Pfam PF04542 Sigma-70 region 2 31 97 2.5E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PACID_33690 87bd2a26f52c1e906a2720dbc1ede869 194 SUPERFAMILY SSF88946 9 112 2.94E-28 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 Pfam PF07499 RuvA, C-terminal domain 150 199 2.4E-11 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 SMART SM00278 107 126 0.77 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 SMART SM00278 72 91 170.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 Pfam PF01330 RuvA N terminal domain 1 61 2.9E-15 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 SUPERFAMILY SSF46929 150 200 1.94E-7 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 Gene3D G3DSA:2.40.50.140 1 65 1.7E-18 T 14-10-2018 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 Gene3D G3DSA:1.10.8.10 136 201 4.8E-18 T 14-10-2018 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 SUPERFAMILY SSF50249 1 62 1.54E-11 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 SUPERFAMILY SSF47781 65 131 1.67E-18 T 14-10-2018 IPR010994 RuvA domain 2-like PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 Gene3D G3DSA:1.10.150.20 66 135 1.0E-21 T 14-10-2018 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 25.596 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 PACID_18030 7d5d18ad7514f7e305b647ec6267ec28 201 Pfam PF14520 Helix-hairpin-helix domain 71 129 2.5E-15 T 14-10-2018 PACID_02630 2e29a130df12f69340860358fd7027a7 556 PIRSF PIRSF000076 1 553 4.0E-208 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 PACID_02630 2e29a130df12f69340860358fd7027a7 556 Gene3D G3DSA:1.20.1270.20 153 235 2.2E-23 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 PACID_02630 2e29a130df12f69340860358fd7027a7 556 Pfam PF03063 Prismane/CO dehydrogenase family 1 535 2.3E-145 T 14-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 PACID_02630 2e29a130df12f69340860358fd7027a7 556 SUPERFAMILY SSF56821 1 539 6.8E-175 T 14-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 PACID_02630 2e29a130df12f69340860358fd7027a7 556 Gene3D G3DSA:3.40.50.2030 237 381 5.0E-62 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 PACID_02630 2e29a130df12f69340860358fd7027a7 556 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 547 5.7E-208 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 PACID_02630 2e29a130df12f69340860358fd7027a7 556 Gene3D G3DSA:3.40.50.2030 382 551 1.6E-56 T 14-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 PACID_02630 2e29a130df12f69340860358fd7027a7 556 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.019 T 14-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 PACID_02630 2e29a130df12f69340860358fd7027a7 556 Gene3D G3DSA:1.20.1270.20 1 143 8.7E-37 T 14-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 PACID_17580 5be6cab4a5dec3cf25054c786a86e86f 308 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 299 1.5E-63 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 PACID_17580 5be6cab4a5dec3cf25054c786a86e86f 308 Pfam PF02911 Formyl transferase, C-terminal domain 203 299 3.8E-21 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PACID_17580 5be6cab4a5dec3cf25054c786a86e86f 308 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 1 302 29.198 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 PACID_17580 5be6cab4a5dec3cf25054c786a86e86f 308 SUPERFAMILY SSF50486 204 307 7.69E-26 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 PACID_17580 5be6cab4a5dec3cf25054c786a86e86f 308 Gene3D G3DSA:3.10.25.10 206 307 1.4E-21 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PACID_17580 5be6cab4a5dec3cf25054c786a86e86f 308 Pfam PF00551 Formyl transferase 3 174 5.5E-34 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PACID_17580 5be6cab4a5dec3cf25054c786a86e86f 308 Gene3D G3DSA:3.40.50.170 1 205 6.4E-61 T 14-10-2018 PACID_17580 5be6cab4a5dec3cf25054c786a86e86f 308 SUPERFAMILY SSF53328 2 205 1.7E-51 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PACID_19720 83991e1473825f689cbb7838985b20c2 473 SUPERFAMILY SSF50621 300 465 2.3E-45 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 264 279 - T 14-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site PACID_19720 83991e1473825f689cbb7838985b20c2 473 SUPERFAMILY SSF51419 63 328 7.66E-70 T 14-10-2018 IPR029066 PLP-binding barrel PACID_19720 83991e1473825f689cbb7838985b20c2 473 Gene3D G3DSA:3.20.20.10 71 326 6.0E-156 T 14-10-2018 IPR029066 PLP-binding barrel PACID_19720 83991e1473825f689cbb7838985b20c2 473 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 92 110 - T 14-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site PACID_19720 83991e1473825f689cbb7838985b20c2 473 Gene3D G3DSA:2.40.37.10 50 461 6.0E-156 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 327 422 2.8E-15 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 42 464 6.0E-132 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01181 Diaminopimelate decarboxylase signature 349 367 1.7E-21 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01181 Diaminopimelate decarboxylase signature 199 208 1.7E-21 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01181 Diaminopimelate decarboxylase signature 110 127 1.7E-21 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01181 Diaminopimelate decarboxylase signature 432 454 1.7E-21 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 92 110 4.9E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 112 124 4.9E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 316 335 4.9E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 227 240 4.9E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 422 435 4.9E-13 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 72 326 7.8E-57 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PACID_19720 83991e1473825f689cbb7838985b20c2 473 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 52 465 37.619 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 PACID_25400 aeadf5ae18ed4baf02325008d1f2dad5 123 Pfam PF08044 Domain of unknown function (DUF1707) 18 68 9.2E-14 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Pfam PF00271 Helicase conserved C-terminal domain 416 513 3.1E-14 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Gene3D G3DSA:1.10.10.10 894 966 1.6E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Gene3D G3DSA:3.40.50.300 317 530 7.9E-28 T 14-10-2018 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Gene3D G3DSA:1.10.601.10 701 803 2.6E-42 T 14-10-2018 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 SMART SM00487 145 312 5.2E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 SUPERFAMILY SSF88659 906 960 1.39E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 PRINTS PR00046 Major sigma-70 factor signature 755 768 8.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 PRINTS PR00046 Major sigma-70 factor signature 941 952 8.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 PRINTS PR00046 Major sigma-70 factor signature 905 917 8.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 PRINTS PR00046 Major sigma-70 factor signature 926 941 8.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 PRINTS PR00046 Major sigma-70 factor signature 779 787 8.0E-17 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 SMART SM00490 433 514 7.0E-14 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Pfam PF00140 Sigma-70 factor, region 1.2 665 699 3.1E-11 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Pfam PF04545 Sigma-70, region 4 906 954 2.4E-10 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 727 954 1.3E-20 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Pfam PF04851 Type III restriction enzyme, res subunit 151 287 8.4E-15 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 SUPERFAMILY SSF52540 163 518 4.34E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Pfam PF04542 Sigma-70 region 2 732 799 4.9E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 SUPERFAMILY SSF88946 664 799 7.38E-41 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PACID_29420 fdc1f17c8bf980e401eeb87284883a85 1036 Gene3D G3DSA:3.40.50.300 139 314 1.3E-29 T 14-10-2018 PACID_01030 b57a09b9275a61a7c98db8cd9ebc58bc 128 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 74 2.1E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_01030 b57a09b9275a61a7c98db8cd9ebc58bc 128 SMART SM00345 15 74 2.4E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_01030 b57a09b9275a61a7c98db8cd9ebc58bc 128 SUPERFAMILY SSF46785 5 85 7.87E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_01030 b57a09b9275a61a7c98db8cd9ebc58bc 128 Gene3D G3DSA:1.10.10.10 8 125 4.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_30770 f4503a671ed2b917fa58e58c7267768e 231 SUPERFAMILY SSF53474 3 230 3.21E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_30770 f4503a671ed2b917fa58e58c7267768e 231 Pfam PF12697 Alpha/beta hydrolase family 3 224 4.1E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_30770 f4503a671ed2b917fa58e58c7267768e 231 Gene3D G3DSA:3.40.50.1820 1 231 3.1E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_03500 eda70e196bb8de9ead04f3bf8ec0da23 390 SUPERFAMILY SSF53067 80 378 1.0E-33 T 14-10-2018 PACID_03500 eda70e196bb8de9ead04f3bf8ec0da23 390 Gene3D G3DSA:3.30.420.40 88 205 2.8E-54 T 14-10-2018 PACID_03500 eda70e196bb8de9ead04f3bf8ec0da23 390 Pfam PF00480 ROK family 133 373 6.8E-32 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PACID_03500 eda70e196bb8de9ead04f3bf8ec0da23 390 Gene3D G3DSA:3.30.420.40 206 360 2.8E-54 T 14-10-2018 PACID_03500 eda70e196bb8de9ead04f3bf8ec0da23 390 Pfam PF09339 IclR helix-turn-helix domain 11 55 9.6E-7 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PACID_03500 eda70e196bb8de9ead04f3bf8ec0da23 390 SUPERFAMILY SSF46785 6 71 5.3E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_03500 eda70e196bb8de9ead04f3bf8ec0da23 390 Gene3D G3DSA:1.10.10.10 2 75 7.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_22580 de9b4a2120f23259ef8882cdb2cdd8b3 85 SUPERFAMILY SSF47413 3 58 4.56E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_22580 de9b4a2120f23259ef8882cdb2cdd8b3 85 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 PACID_22580 de9b4a2120f23259ef8882cdb2cdd8b3 85 SMART SM00354 3 70 2.9E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_22580 de9b4a2120f23259ef8882cdb2cdd8b3 85 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 5.2E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_22580 de9b4a2120f23259ef8882cdb2cdd8b3 85 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 5.2E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_22580 de9b4a2120f23259ef8882cdb2cdd8b3 85 Gene3D G3DSA:1.10.260.40 1 47 7.8E-20 T 14-10-2018 PACID_22580 de9b4a2120f23259ef8882cdb2cdd8b3 85 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 48 1.6E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 2 261 6.9E-79 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 SUPERFAMILY SSF54782 203 301 6.67E-17 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 210 293 3.5E-13 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 PIRSF PIRSF001438 1 310 1.8E-95 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 Gene3D G3DSA:3.30.160.40 205 302 8.0E-21 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 1 191 4.9E-58 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 Gene3D G3DSA:3.40.190.10 76 179 4.8E-62 T 14-10-2018 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 Gene3D G3DSA:3.40.190.10 2 192 4.8E-62 T 14-10-2018 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 PRINTS PR00151 Porphobilinogen deaminase signature 213 230 2.6E-29 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 PRINTS PR00151 Porphobilinogen deaminase signature 21 41 2.6E-29 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 PRINTS PR00151 Porphobilinogen deaminase signature 100 117 2.6E-29 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 PRINTS PR00151 Porphobilinogen deaminase signature 52 71 2.6E-29 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 PRINTS PR00151 Porphobilinogen deaminase signature 119 136 2.6E-29 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 SUPERFAMILY SSF53850 2 194 7.06E-56 T 14-10-2018 PACID_28170 fd931f1a1d61e5d28a02e81e05236483 339 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 214 230 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_10910 6956b06b2e5be4ac08ffa5e669841fdc 321 Gene3D G3DSA:1.10.4080.10 4 301 7.4E-69 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily PACID_10910 6956b06b2e5be4ac08ffa5e669841fdc 321 Pfam PF03747 ADP-ribosylglycohydrolase 13 287 3.7E-47 T 14-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 PACID_10910 6956b06b2e5be4ac08ffa5e669841fdc 321 SUPERFAMILY SSF101478 7 297 2.09E-49 T 14-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily PACID_24470 ef02d729fbd56f49dd3a372a21910b04 453 Pfam PF02653 Branched-chain amino acid transport system / permease component 156 424 2.2E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_28480 26665d6b6be18c2ab001bca257c9b034 211 Gene3D G3DSA:1.10.286.10 14 75 5.7E-19 T 14-10-2018 PACID_28480 26665d6b6be18c2ab001bca257c9b034 211 SUPERFAMILY SSF55620 24 208 6.45E-74 T 14-10-2018 PACID_28480 26665d6b6be18c2ab001bca257c9b034 211 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 87 103 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PACID_28480 26665d6b6be18c2ab001bca257c9b034 211 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 137 147 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PACID_28480 26665d6b6be18c2ab001bca257c9b034 211 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 33 208 9.5E-70 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PACID_28480 26665d6b6be18c2ab001bca257c9b034 211 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 27 209 40.592 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PACID_28480 26665d6b6be18c2ab001bca257c9b034 211 Gene3D G3DSA:3.30.1130.10 77 210 3.0E-57 T 14-10-2018 PACID_28480 26665d6b6be18c2ab001bca257c9b034 211 Pfam PF01227 GTP cyclohydrolase I 32 208 9.4E-75 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 PACID_22210 d48b26a5f8b4f2e120f15cda19d83347 273 SUPERFAMILY SSF55315 8 107 4.24E-18 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like PACID_22210 d48b26a5f8b4f2e120f15cda19d83347 273 SUPERFAMILY SSF75217 100 271 5.23E-41 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PACID_22210 d48b26a5f8b4f2e120f15cda19d83347 273 Pfam PF00588 SpoU rRNA Methylase family 122 267 2.5E-33 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PACID_22210 d48b26a5f8b4f2e120f15cda19d83347 273 Gene3D G3DSA:3.40.1280.10 111 273 3.3E-48 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PACID_22210 d48b26a5f8b4f2e120f15cda19d83347 273 Gene3D G3DSA:3.30.1330.30 7 107 2.7E-5 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like PACID_13020 265183238e62f3b231c10d5284e457fa 947 Gene3D G3DSA:3.30.465.40 246 270 6.4E-6 T 14-10-2018 PACID_13020 265183238e62f3b231c10d5284e457fa 947 Gene3D G3DSA:3.30.465.40 11 202 6.1E-30 T 14-10-2018 PACID_13020 265183238e62f3b231c10d5284e457fa 947 SUPERFAMILY SSF55103 274 524 1.24E-46 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PACID_13020 265183238e62f3b231c10d5284e457fa 947 Gene3D G3DSA:3.30.70.2740 398 480 6.3E-8 T 14-10-2018 PACID_13020 265183238e62f3b231c10d5284e457fa 947 Pfam PF02913 FAD linked oxidases, C-terminal domain 273 518 9.9E-49 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PACID_13020 265183238e62f3b231c10d5284e457fa 947 Gene3D G3DSA:1.10.1060.10 519 634 1.9E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_13020 265183238e62f3b231c10d5284e457fa 947 Pfam PF13534 4Fe-4S dicluster domain 544 616 2.7E-9 T 14-10-2018 PACID_13020 265183238e62f3b231c10d5284e457fa 947 Pfam PF02754 Cysteine-rich domain 842 920 0.01 T 14-10-2018 IPR004017 Cysteine-rich domain PACID_13020 265183238e62f3b231c10d5284e457fa 947 Pfam PF01565 FAD binding domain 47 183 9.9E-32 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PACID_13020 265183238e62f3b231c10d5284e457fa 947 Gene3D G3DSA:3.40.462.40 271 310 6.4E-6 T 14-10-2018 PACID_13020 265183238e62f3b231c10d5284e457fa 947 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 545 556 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_13020 265183238e62f3b231c10d5284e457fa 947 SUPERFAMILY SSF46548 498 626 2.09E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_13020 265183238e62f3b231c10d5284e457fa 947 SUPERFAMILY SSF56176 11 269 9.09E-53 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PACID_03130 7506d1f508f56341b2eabdb975c31a4a 352 Pfam PF13377 Periplasmic binding protein-like domain 175 339 7.8E-34 T 14-10-2018 PACID_03130 7506d1f508f56341b2eabdb975c31a4a 352 SUPERFAMILY SSF53822 69 344 1.41E-59 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_03130 7506d1f508f56341b2eabdb975c31a4a 352 SUPERFAMILY SSF47413 8 67 6.51E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_03130 7506d1f508f56341b2eabdb975c31a4a 352 SMART SM00354 8 79 2.0E-28 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_03130 7506d1f508f56341b2eabdb975c31a4a 352 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 56 3.2E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_03130 7506d1f508f56341b2eabdb975c31a4a 352 Gene3D G3DSA:1.10.260.40 1 62 8.8E-21 T 14-10-2018 PACID_03130 7506d1f508f56341b2eabdb975c31a4a 352 Gene3D G3DSA:3.40.50.2300 167 294 1.2E-68 T 14-10-2018 PACID_03130 7506d1f508f56341b2eabdb975c31a4a 352 Gene3D G3DSA:3.40.50.2300 63 308 1.2E-68 T 14-10-2018 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 Pfam PF01634 ATP phosphoribosyltransferase 54 207 6.8E-43 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 286 31.97 T 14-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 Gene3D G3DSA:3.30.70.120 214 280 2.5E-25 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 197 285 6.3E-29 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 146 167 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 Pfam PF08029 HisG, C-terminal domain 211 282 1.5E-25 T 14-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 SUPERFAMILY SSF53850 6 211 2.29E-60 T 14-10-2018 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 187 1.9E-53 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 Gene3D G3DSA:3.40.190.10 96 183 3.3E-56 T 14-10-2018 PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 SUPERFAMILY SSF54913 214 285 7.0E-21 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta PACID_20980 951c312eb8c4b34f0ee6dfed11b32af9 286 Gene3D G3DSA:3.40.190.10 7 189 3.3E-56 T 14-10-2018 PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 63 128 2.0E-13 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 6 52 9.9E-20 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 Gene3D G3DSA:3.30.1390.10 58 128 6.3E-29 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 62 128 9.6E-28 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 128 2.3E-46 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 3 128 23.756 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 SUPERFAMILY SSF48300 5 64 1.83E-15 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 SUPERFAMILY SSF54736 57 128 6.63E-23 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PACID_25930 1dc774821b67032e312fddab04c4b1ad 128 Gene3D G3DSA:1.20.5.710 4 57 1.7E-21 T 14-10-2018 PACID_05980 2ce87b8433d0054e1f151dbc2dd9c035 457 PIRSF PIRSF006060 10 452 2.4E-55 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_05980 2ce87b8433d0054e1f151dbc2dd9c035 457 Pfam PF13520 Amino acid permease 39 429 2.4E-36 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_05980 2ce87b8433d0054e1f151dbc2dd9c035 457 Gene3D G3DSA:1.20.1740.10 24 456 8.1E-49 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 439 29.02 T 14-10-2018 IPR026593 Protein translocase subunit SecY PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 408 426 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 278 297 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 158 183 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 74 94 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 184 207 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 374 392 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 319 341 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PRINTS PR00303 Preprotein translocase SecY subunit signature 115 138 5.8E-100 T 14-10-2018 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 435 7.8E-138 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 SUPERFAMILY SSF103491 1 430 1.7E-124 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 Gene3D G3DSA:1.10.3370.10 1 435 2.0E-164 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 Pfam PF00344 SecY translocase 76 423 1.1E-115 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 ProSitePatterns PS00756 Protein secY signature 2. 177 194 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_25440 e76eb45f74fe9d7a4f249a15197ce5ea 441 PIRSF PIRSF004557 1 440 7.9E-122 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 SUPERFAMILY SSF52540 12 232 1.98E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 Pfam PF00005 ABC transporter 30 178 3.4E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 SMART SM00382 285 479 0.003 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 SMART SM00382 38 226 2.9E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 Gene3D G3DSA:3.40.50.300 267 502 2.1E-42 T 14-10-2018 PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 SUPERFAMILY SSF52540 275 489 2.51E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 Pfam PF00005 ABC transporter 277 430 1.1E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_00150 e3e2fe2add3d49e2e67027f8eb890891 513 Gene3D G3DSA:3.40.50.300 8 242 1.5E-57 T 14-10-2018 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 Pfam PF01168 Alanine racemase, N-terminal domain 32 253 2.0E-57 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 Gene3D G3DSA:2.40.37.10 30 396 1.6E-120 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 Pfam PF00842 Alanine racemase, C-terminal domain 270 396 1.5E-46 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 TIGRFAM TIGR00492 alr: alanine racemase 30 398 1.7E-95 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 56 65 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 Gene3D G3DSA:3.20.20.10 34 258 1.6E-120 T 14-10-2018 IPR029066 PLP-binding barrel PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 SMART SM01005 270 398 2.3E-67 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 286 301 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 324 341 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 87 105 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 182 193 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 380 393 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 303 318 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 226 253 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 50 66 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 PRINTS PR00992 Alanine racemase signature 148 160 1.6E-51 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 SUPERFAMILY SSF50621 266 401 2.62E-51 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 SUPERFAMILY SSF51419 32 257 5.67E-56 T 14-10-2018 IPR029066 PLP-binding barrel PACID_31080 0f0dcc4884e9697b9c706f69b4e8f713 408 Hamap MF_01201 Alanine racemase. 25 398 31.142 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_16390 483734de30fdfcb4e7ec5755c424d5ad 241 SUPERFAMILY SSF53800 15 226 2.09E-8 T 14-10-2018 PACID_22660 340304158a003064983a1d65cf97de81 337 Gene3D G3DSA:1.10.357.140 61 206 1.1E-20 T 14-10-2018 PACID_22660 340304158a003064983a1d65cf97de81 337 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 51 333 4.6E-97 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PACID_22660 340304158a003064983a1d65cf97de81 337 Pfam PF01040 UbiA prenyltransferase family 65 319 9.8E-72 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 PACID_22660 340304158a003064983a1d65cf97de81 337 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 48 335 19.158 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 Gene3D G3DSA:1.10.10.10 2 85 5.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 SUPERFAMILY SSF46785 4 82 3.96E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 Pfam PF03466 LysR substrate binding domain 89 289 8.3E-40 T 14-10-2018 IPR005119 LysR, substrate-binding PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 Gene3D G3DSA:3.40.190.10 91 273 7.5E-43 T 14-10-2018 PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.2E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 SUPERFAMILY SSF53850 88 290 8.22E-36 T 14-10-2018 PACID_06260 36537349f832a2d56dabe9cc24c68d88 294 Gene3D G3DSA:3.40.190.10 164 264 7.5E-43 T 14-10-2018 PACID_27150 a417c526e341be9cf5f4f370d159e865 449 Pfam PF01546 Peptidase family M20/M25/M40 89 439 3.5E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PACID_27150 a417c526e341be9cf5f4f370d159e865 449 SUPERFAMILY SSF53187 15 448 8.47E-51 T 14-10-2018 PACID_27150 a417c526e341be9cf5f4f370d159e865 449 Pfam PF07687 Peptidase dimerisation domain 198 345 1.5E-18 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_27150 a417c526e341be9cf5f4f370d159e865 449 Gene3D G3DSA:3.40.630.10 25 437 9.9E-113 T 14-10-2018 PACID_27150 a417c526e341be9cf5f4f370d159e865 449 Gene3D G3DSA:3.30.70.360 206 366 9.9E-113 T 14-10-2018 PACID_19310 54f8d9c4b700b9b693da4a781cc270ca 220 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 72 211 6.6E-20 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PACID_19310 54f8d9c4b700b9b693da4a781cc270ca 220 SUPERFAMILY SSF50891 66 211 1.05E-25 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_19310 54f8d9c4b700b9b693da4a781cc270ca 220 Gene3D G3DSA:2.40.100.10 53 219 1.1E-32 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Gene3D G3DSA:3.20.20.20 325 621 7.6E-96 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 937 1172 5.1E-31 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Gene3D G3DSA:1.10.288.10 922 979 2.3E-45 T 14-10-2018 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Pfam PF02574 Homocysteine S-methyltransferase 14 303 5.9E-62 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Pfam PF02607 B12 binding domain 646 718 6.4E-24 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 PIRSF PIRSF000381 1 1174 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Pfam PF02310 B12 binding domain 731 847 2.3E-17 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 SUPERFAMILY SSF56507 904 1173 1.96E-77 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 SUPERFAMILY SSF52242 726 858 5.65E-33 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Gene3D G3DSA:3.40.50.280 727 862 7.6E-37 T 14-10-2018 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 SUPERFAMILY SSF51717 336 601 9.29E-74 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 SUPERFAMILY SSF47644 640 724 1.14E-24 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 SUPERFAMILY SSF82282 1 378 8.89E-105 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Gene3D G3DSA:3.10.196.10 908 1172 2.3E-45 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Gene3D G3DSA:1.10.1240.10 635 722 3.5E-29 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Gene3D G3DSA:3.20.20.330 1 314 2.5E-91 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 Pfam PF00809 Pterin binding enzyme 339 575 4.6E-44 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 SMART SM01018 643 725 3.9E-41 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_17540 f9ba10d06f4538b1ed946a2cc4b0db7f 1174 TIGRFAM TIGR02082 metH: methionine synthase 11 1172 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_30130 0868ad8b6c8bbb44178177ebda054a09 477 Gene3D G3DSA:3.40.640.10 106 372 3.7E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_30130 0868ad8b6c8bbb44178177ebda054a09 477 Pfam PF00202 Aminotransferase class-III 73 471 1.2E-88 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_30130 0868ad8b6c8bbb44178177ebda054a09 477 Gene3D G3DSA:3.90.1150.10 74 471 3.7E-129 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_30130 0868ad8b6c8bbb44178177ebda054a09 477 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 285 322 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_30130 0868ad8b6c8bbb44178177ebda054a09 477 SUPERFAMILY SSF53383 61 472 4.36E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_12710 4de37adab0e2616e928d79c440c49441 373 SUPERFAMILY SSF103025 5 284 9.31E-85 T 14-10-2018 PACID_12710 4de37adab0e2616e928d79c440c49441 373 Gene3D G3DSA:4.10.1250.10 247 287 1.2E-13 T 14-10-2018 PACID_12710 4de37adab0e2616e928d79c440c49441 373 PIRSF PIRSF006487 1 373 3.2E-89 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PACID_12710 4de37adab0e2616e928d79c440c49441 373 Gene3D G3DSA:3.30.70.1400 56 142 2.6E-77 T 14-10-2018 PACID_12710 4de37adab0e2616e928d79c440c49441 373 SUPERFAMILY SSF101790 288 371 8.34E-24 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal PACID_12710 4de37adab0e2616e928d79c440c49441 373 Hamap MF_00259 Aminomethyltransferase [gcvT]. 5 372 40.903 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PACID_12710 4de37adab0e2616e928d79c440c49441 373 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 276 366 2.4E-22 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 PACID_12710 4de37adab0e2616e928d79c440c49441 373 Pfam PF01571 Aminomethyltransferase folate-binding domain 19 267 8.8E-83 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain PACID_12710 4de37adab0e2616e928d79c440c49441 373 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 7 372 5.5E-99 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 PACID_12710 4de37adab0e2616e928d79c440c49441 373 Gene3D G3DSA:2.40.30.110 290 372 1.8E-29 T 14-10-2018 PACID_12710 4de37adab0e2616e928d79c440c49441 373 Gene3D G3DSA:3.30.1360.120 9 245 2.6E-77 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 PACID_15920 42bd2ee877108bad8556af8b5fcca835 376 Pfam PF00589 Phage integrase family 181 354 5.2E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PACID_15920 42bd2ee877108bad8556af8b5fcca835 376 Gene3D G3DSA:1.10.443.10 181 367 6.0E-38 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PACID_15920 42bd2ee877108bad8556af8b5fcca835 376 Gene3D G3DSA:1.10.150.130 76 180 5.1E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PACID_15920 42bd2ee877108bad8556af8b5fcca835 376 SUPERFAMILY SSF56349 78 359 2.94E-52 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PACID_01890 e429a4fe9c1a96988ab67380911f1e30 263 Pfam PF05690 Thiazole biosynthesis protein ThiG 13 255 9.5E-96 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 PACID_01890 e429a4fe9c1a96988ab67380911f1e30 263 Gene3D G3DSA:3.20.20.70 2 261 1.6E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_01890 e429a4fe9c1a96988ab67380911f1e30 263 Hamap MF_00443 Thiazole synthase [thiG]. 10 261 38.648 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 PACID_01890 e429a4fe9c1a96988ab67380911f1e30 263 SUPERFAMILY SSF110399 10 247 1.83E-72 T 14-10-2018 PACID_11650 f338df3fef61ed050737da75c37b0aa3 361 TIGRFAM TIGR01900 dapE-gram_pos: succinyl-diaminopimelate desuccinylase 6 357 5.9E-145 T 14-10-2018 IPR010174 Succinyl-diaminopimelate desuccinylase, DapE GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 PACID_11650 f338df3fef61ed050737da75c37b0aa3 361 Pfam PF01546 Peptidase family M20/M25/M40 65 353 4.6E-19 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PACID_11650 f338df3fef61ed050737da75c37b0aa3 361 SUPERFAMILY SSF55031 170 275 1.64E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PACID_11650 f338df3fef61ed050737da75c37b0aa3 361 Pfam PF07687 Peptidase dimerisation domain 170 269 9.5E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_11650 f338df3fef61ed050737da75c37b0aa3 361 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 64 73 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PACID_11650 f338df3fef61ed050737da75c37b0aa3 361 SUPERFAMILY SSF53187 6 356 5.71E-40 T 14-10-2018 PACID_11650 f338df3fef61ed050737da75c37b0aa3 361 Gene3D G3DSA:3.30.70.360 170 280 3.5E-91 T 14-10-2018 PACID_11650 f338df3fef61ed050737da75c37b0aa3 361 Gene3D G3DSA:3.40.630.10 16 346 3.5E-91 T 14-10-2018 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 Pfam PF00561 alpha/beta hydrolase fold 47 317 1.4E-27 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 PIRSF PIRSF006431 11 335 1.5E-125 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 125 139 9.6E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 49 57 9.6E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 75 86 9.6E-13 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 TIGRFAM TIGR01249 pro_imino_pep_1: prolyl aminopeptidase 21 332 5.0E-108 T 14-10-2018 IPR005944 Proline iminopeptidase GO:0004177|GO:0005737|GO:0006508 KEGG: 00330+3.4.11.5 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 SUPERFAMILY SSF53474 16 331 6.63E-53 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 Gene3D G3DSA:3.40.50.1820 14 333 8.1E-90 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 PRINTS PR00111 Alpha/beta hydrolase fold signature 125 138 6.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 87 6.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_14260 de325e6a4d92a6abfe6e0a78dc3cfa74 335 PRINTS PR00111 Alpha/beta hydrolase fold signature 139 152 6.0E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_20600 cd6ed67890040aa9a1cc5a887ad0bd49 358 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 14 339 2.2E-82 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PACID_20600 cd6ed67890040aa9a1cc5a887ad0bd49 358 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 252 271 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 PACID_20600 cd6ed67890040aa9a1cc5a887ad0bd49 358 SUPERFAMILY SSF53659 11 356 8.28E-101 T 14-10-2018 PACID_20600 cd6ed67890040aa9a1cc5a887ad0bd49 358 SMART SM01329 13 354 3.5E-142 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 PACID_20600 cd6ed67890040aa9a1cc5a887ad0bd49 358 Gene3D G3DSA:3.40.718.10 12 358 1.4E-119 T 14-10-2018 PACID_22020 23e70259f4c273e67e362c72522ddbc3 405 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 41 400 65.869 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 PACID_22020 23e70259f4c273e67e362c72522ddbc3 405 SUPERFAMILY SSF102114 133 371 8.76E-14 T 14-10-2018 PACID_22020 23e70259f4c273e67e362c72522ddbc3 405 Gene3D G3DSA:1.10.150.530 43 99 9.6E-6 T 14-10-2018 PACID_22020 23e70259f4c273e67e362c72522ddbc3 405 Pfam PF04055 Radical SAM superfamily 152 320 2.0E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_22020 23e70259f4c273e67e362c72522ddbc3 405 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 44 399 3.1E-91 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 PACID_22020 23e70259f4c273e67e362c72522ddbc3 405 PIRSF PIRSF006004 38 402 1.1E-112 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 PACID_22020 23e70259f4c273e67e362c72522ddbc3 405 Gene3D G3DSA:3.20.20.70 105 385 1.7E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_15200 93971b661afdfac8ea695bd01693004d 199 Gene3D G3DSA:1.20.120.1760 6 182 3.4E-15 T 14-10-2018 PACID_15200 93971b661afdfac8ea695bd01693004d 199 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 56 78 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PACID_15200 93971b661afdfac8ea695bd01693004d 199 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 8 181 6.5E-37 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PACID_15200 93971b661afdfac8ea695bd01693004d 199 PIRSF PIRSF000847 5 193 1.5E-45 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PACID_15200 93971b661afdfac8ea695bd01693004d 199 Pfam PF01066 CDP-alcohol phosphatidyltransferase 9 78 2.8E-15 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PACID_05100 75dd6b2d8449fdd426dc6d8de010367f 450 SUPERFAMILY SSF52540 191 439 2.23E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_05100 75dd6b2d8449fdd426dc6d8de010367f 450 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 18 449 3.1E-167 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 PACID_05100 75dd6b2d8449fdd426dc6d8de010367f 450 Pfam PF03796 DnaB-like helicase C terminal domain 193 446 5.8E-105 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 PACID_05100 75dd6b2d8449fdd426dc6d8de010367f 450 Gene3D G3DSA:3.40.50.300 176 450 1.3E-103 T 14-10-2018 PACID_05100 75dd6b2d8449fdd426dc6d8de010367f 450 Pfam PF00772 DnaB-like helicase N terminal domain 18 119 3.6E-34 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 PACID_05100 75dd6b2d8449fdd426dc6d8de010367f 450 SUPERFAMILY SSF48024 16 127 6.28E-37 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 PACID_05100 75dd6b2d8449fdd426dc6d8de010367f 450 Gene3D G3DSA:1.10.860.10 12 174 3.6E-59 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal PACID_30990 ff0aba55c11f600d9aa8b0bec205be62 279 SUPERFAMILY SSF161098 5 279 5.23E-71 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30990 ff0aba55c11f600d9aa8b0bec205be62 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 271 1.8E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_30990 ff0aba55c11f600d9aa8b0bec205be62 279 Gene3D G3DSA:1.10.3720.10 1 267 5.1E-63 T 14-10-2018 IPR035906 MetI-like superfamily PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 273 283 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 Gene3D G3DSA:3.40.50.200 168 529 5.1E-74 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 193 204 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 Pfam PF00082 Subtilase family 188 497 9.4E-39 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 269 282 2.1E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 458 474 2.1E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 PRINTS PR00723 Subtilisin serine protease family (S8) signature 188 207 2.1E-17 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 SUPERFAMILY SSF52743 129 521 1.17E-66 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 PACID_14450 23a9e7493c8dbad1254c03ff9ca168c5 910 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 459 469 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site PACID_29990 2c3310b7c9c83b2c47c89eb09184a76e 458 ProSitePatterns PS00217 Sugar transport proteins signature 2. 140 165 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_29990 2c3310b7c9c83b2c47c89eb09184a76e 458 SUPERFAMILY SSF103473 23 442 5.36E-75 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_29990 2c3310b7c9c83b2c47c89eb09184a76e 458 Pfam PF00083 Sugar (and other) transporter 34 236 3.7E-28 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_29990 2c3310b7c9c83b2c47c89eb09184a76e 458 Pfam PF07690 Major Facilitator Superfamily 272 443 3.8E-15 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_29990 2c3310b7c9c83b2c47c89eb09184a76e 458 Gene3D G3DSA:1.20.1250.20 28 453 1.7E-70 T 14-10-2018 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 Gene3D G3DSA:3.40.50.300 872 1062 8.3E-51 T 14-10-2018 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 Gene3D G3DSA:3.40.50.300 598 791 4.1E-50 T 14-10-2018 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 SMART SM00382 655 794 5.4E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 SMART SM00382 926 1065 3.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 SUPERFAMILY SSF51126 15 502 1.26E-8 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 930 1059 6.5E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 660 790 1.5E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 SUPERFAMILY SSF52540 889 1093 8.3E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 PRINTS PR00819 CbxX/CfqX superfamily signature 967 981 1.0E-47 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 PRINTS PR00819 CbxX/CfqX superfamily signature 1012 1024 1.0E-47 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 PRINTS PR00819 CbxX/CfqX superfamily signature 929 944 1.0E-47 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 PRINTS PR00819 CbxX/CfqX superfamily signature 981 1000 1.0E-47 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 PRINTS PR00819 CbxX/CfqX superfamily signature 1033 1050 1.0E-47 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 PRINTS PR00819 CbxX/CfqX superfamily signature 1106 1118 1.0E-47 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 PRINTS PR00819 CbxX/CfqX superfamily signature 1050 1069 1.0E-47 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 PRINTS PR00819 CbxX/CfqX superfamily signature 889 903 1.0E-47 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 PACID_03370 29ba6ab668d8467ce07f4aef11bd3467 1146 SUPERFAMILY SSF52540 620 843 2.49E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_22280 079eb53711b60d01139300b619fe1161 484 ProSitePatterns PS00163 Fumarate lyases signature. 335 344 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PACID_22280 079eb53711b60d01139300b619fe1161 484 PRINTS PR00145 Argininosuccinate lyase family signature 335 351 6.7E-5 T 14-10-2018 PACID_22280 079eb53711b60d01139300b619fe1161 484 PRINTS PR00145 Argininosuccinate lyase family signature 193 213 6.7E-5 T 14-10-2018 PACID_22280 079eb53711b60d01139300b619fe1161 484 Pfam PF10415 Fumarase C C-terminus 426 479 7.5E-17 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_22280 079eb53711b60d01139300b619fe1161 484 Gene3D G3DSA:1.10.40.30 425 482 4.1E-16 T 14-10-2018 PACID_22280 079eb53711b60d01139300b619fe1161 484 PRINTS PR00149 Fumarate lyase superfamily signature 289 316 1.3E-26 T 14-10-2018 IPR000362 Fumarate lyase family PACID_22280 079eb53711b60d01139300b619fe1161 484 PRINTS PR00149 Fumarate lyase superfamily signature 153 171 1.3E-26 T 14-10-2018 IPR000362 Fumarate lyase family PACID_22280 079eb53711b60d01139300b619fe1161 484 PRINTS PR00149 Fumarate lyase superfamily signature 335 351 1.3E-26 T 14-10-2018 IPR000362 Fumarate lyase family PACID_22280 079eb53711b60d01139300b619fe1161 484 PRINTS PR00149 Fumarate lyase superfamily signature 198 216 1.3E-26 T 14-10-2018 IPR000362 Fumarate lyase family PACID_22280 079eb53711b60d01139300b619fe1161 484 SUPERFAMILY SSF48557 21 480 7.85E-137 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PACID_22280 079eb53711b60d01139300b619fe1161 484 Pfam PF00206 Lyase 34 360 7.9E-91 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PACID_22280 079eb53711b60d01139300b619fe1161 484 Gene3D G3DSA:1.10.275.10 20 157 7.1E-51 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal PACID_22280 079eb53711b60d01139300b619fe1161 484 Gene3D G3DSA:1.20.200.10 158 424 5.9E-109 T 14-10-2018 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 71 661 2.5E-178 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 SUPERFAMILY SSF55681 257 559 2.39E-84 T 14-10-2018 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 SMART SM00863 177 233 6.6E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 SUPERFAMILY SSF52954 563 667 2.57E-24 T 14-10-2018 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 186 233 1.3E-10 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 Gene3D G3DSA:3.40.50.800 567 678 5.4E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 Pfam PF03129 Anticodon binding domain 575 663 1.3E-14 T 14-10-2018 IPR004154 Anticodon-binding PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 Gene3D G3DSA:3.30.930.10 239 566 9.7E-109 T 14-10-2018 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 PRINTS PR01047 Threonyl-tRNA synthetase signature 541 554 4.8E-46 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 PRINTS PR01047 Threonyl-tRNA synthetase signature 357 385 4.8E-46 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 PRINTS PR01047 Threonyl-tRNA synthetase signature 390 413 4.8E-46 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 PRINTS PR01047 Threonyl-tRNA synthetase signature 498 526 4.8E-46 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 PRINTS PR01047 Threonyl-tRNA synthetase signature 568 580 4.8E-46 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 65 668 30.676 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 Gene3D G3DSA:3.30.980.10 64 238 4.5E-52 T 14-10-2018 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 SUPERFAMILY SSF55186 63 254 6.41E-49 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 PACID_16520 3d4b0440112b7d3715a22f74963c58f3 688 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 350 563 1.0E-35 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_02430 27365938e00673a51bddb3c9b58ae9f5 88 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 11 87 2.1E-10 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PACID_02430 27365938e00673a51bddb3c9b58ae9f5 88 Gene3D G3DSA:3.30.2310.20 2 88 5.6E-25 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PACID_02430 27365938e00673a51bddb3c9b58ae9f5 88 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 39 87 6.7E-9 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PACID_02430 27365938e00673a51bddb3c9b58ae9f5 88 SUPERFAMILY SSF143011 4 85 2.88E-20 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 14-10-2018 PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 SUPERFAMILY SSF47413 8 65 7.24E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 Gene3D G3DSA:3.40.50.2300 64 151 1.3E-12 T 14-10-2018 PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 SUPERFAMILY SSF53822 65 330 6.39E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 SMART SM00354 7 77 3.6E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 9 54 9.3E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 Gene3D G3DSA:1.10.260.40 1 63 6.7E-20 T 14-10-2018 PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 Gene3D G3DSA:3.40.50.2300 158 335 2.3E-48 T 14-10-2018 PACID_21140 5ba862ee628037133d7c17dcaee62e67 337 Pfam PF13377 Periplasmic binding protein-like domain 173 333 2.1E-33 T 14-10-2018 PACID_26700 79c14fa90f04ec5b7600439635d84700 341 Pfam PF00288 GHMP kinases N terminal domain 89 136 1.5E-6 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PACID_26700 79c14fa90f04ec5b7600439635d84700 341 Gene3D G3DSA:3.30.70.890 176 306 1.7E-35 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_26700 79c14fa90f04ec5b7600439635d84700 341 SUPERFAMILY SSF54211 2 167 8.35E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_26700 79c14fa90f04ec5b7600439635d84700 341 PIRSF PIRSF015950 1 319 1.8E-104 T 14-10-2018 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 PACID_26700 79c14fa90f04ec5b7600439635d84700 341 Gene3D G3DSA:3.30.230.10 1 175 5.6E-61 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_26700 79c14fa90f04ec5b7600439635d84700 341 SUPERFAMILY SSF55060 169 300 2.16E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_26700 79c14fa90f04ec5b7600439635d84700 341 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 5 297 1.9E-83 T 14-10-2018 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 Pfam PF00366 Ribosomal protein S17 18 85 7.3E-30 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 13 88 24.438 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 13 84 2.0E-31 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 ProSitePatterns PS00056 Ribosomal protein S17 signature. 64 76 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 SUPERFAMILY SSF50249 12 90 2.1E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 PRINTS PR00973 Ribosomal protein S17 family signature 32 55 4.9E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 PRINTS PR00973 Ribosomal protein S17 family signature 64 74 4.9E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 PRINTS PR00973 Ribosomal protein S17 family signature 74 81 4.9E-11 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 Gene3D G3DSA:2.40.50.140 9 91 4.2E-32 T 14-10-2018 PACID_25670 141c047bfdb3ab124b46ee356a6ecc57 91 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 13 83 1.9E-34 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_26540 dfaab4dbb21d7d477e179fab69e7c422 425 Gene3D G3DSA:1.20.1250.20 9 395 2.0E-43 T 14-10-2018 PACID_26540 dfaab4dbb21d7d477e179fab69e7c422 425 Pfam PF05977 Transmembrane secretion effector 2 416 7.3E-50 T 14-10-2018 IPR010290 Transmembrane secretion effector PACID_26540 dfaab4dbb21d7d477e179fab69e7c422 425 SUPERFAMILY SSF103473 10 393 2.88E-51 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_33020 10f2eac4f04a0a407c3bd91a382c40e8 319 Pfam PF00294 pfkB family carbohydrate kinase 21 310 1.7E-34 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PACID_33020 10f2eac4f04a0a407c3bd91a382c40e8 319 SUPERFAMILY SSF53613 19 316 2.96E-53 T 14-10-2018 IPR029056 Ribokinase-like PACID_33020 10f2eac4f04a0a407c3bd91a382c40e8 319 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PACID_33020 10f2eac4f04a0a407c3bd91a382c40e8 319 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 41 65 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PACID_33020 10f2eac4f04a0a407c3bd91a382c40e8 319 Gene3D G3DSA:3.40.1190.20 15 316 2.5E-62 T 14-10-2018 IPR029056 Ribokinase-like PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 SUPERFAMILY SSF51064 139 193 1.57E-13 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 PRINTS PR00773 GrpE protein signature 144 159 2.7E-21 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 PRINTS PR00773 GrpE protein signature 67 83 2.7E-21 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 PRINTS PR00773 GrpE protein signature 95 110 2.7E-21 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 PRINTS PR00773 GrpE protein signature 171 190 2.7E-21 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 Gene3D G3DSA:3.90.20.20 21 134 1.3E-16 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 Gene3D G3DSA:2.30.22.10 137 197 3.0E-15 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 ProSitePatterns PS01071 grpE protein signature. 147 190 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 Pfam PF01025 GrpE 38 191 9.0E-33 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 SUPERFAMILY SSF58014 46 130 8.5E-15 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 PACID_07100 ea106a47763e685e6250ee7a2f91e7b1 221 Hamap MF_01151 Protein GrpE [grpE]. 2 192 16.12 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 SUPERFAMILY SSF46785 2 82 9.28E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 Gene3D G3DSA:1.10.10.10 1 84 2.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 Gene3D G3DSA:3.30.450.40 104 330 1.0E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 334 1.8E-87 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 25.926 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 Gene3D G3DSA:3.30.390.60 127 227 1.0E-35 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 Pfam PF08220 DeoR-like helix-turn-helix domain 16 62 1.6E-4 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 SUPERFAMILY SSF55781 71 338 5.89E-52 T 14-10-2018 PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 Pfam PF01628 HrcA protein C terminal domain 103 322 4.9E-55 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 PACID_14090 a97edc4d7fd5b86cde36b2033783572e 339 PIRSF PIRSF005485 1 339 8.8E-99 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 SUPERFAMILY SSF51445 665 1119 9.5E-151 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 PRINTS PR00131 Glycosyl hydrolase family 1 signature 946 960 5.6E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 PRINTS PR00131 Glycosyl hydrolase family 1 signature 1046 1057 5.6E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 PRINTS PR00131 Glycosyl hydrolase family 1 signature 1067 1084 5.6E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 PRINTS PR00131 Glycosyl hydrolase family 1 signature 1025 1033 5.6E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 PRINTS PR00131 Glycosyl hydrolase family 1 signature 1091 1103 5.6E-20 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 Pfam PF00232 Glycosyl hydrolase family 1 664 1118 8.7E-146 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 Gene3D G3DSA:3.40.50.880 347 565 1.6E-12 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 34 286 1.1E-5 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 SUPERFAMILY SSF51445 12 322 1.59E-41 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 667 681 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 Gene3D G3DSA:3.20.20.80 9 309 1.1E-34 T 14-10-2018 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 Gene3D G3DSA:3.20.20.80 652 1124 9.7E-167 T 14-10-2018 PACID_31000 9a5affe6a2a35a579fe2e62fc9f6bb79 1125 TIGRFAM TIGR03356 BGL: beta-galactosidase 665 1113 1.3E-163 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 PACID_11160 39da485636d5e5a85bf79d72953dd576 420 SUPERFAMILY SSF51445 8 368 7.6E-78 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_11160 39da485636d5e5a85bf79d72953dd576 420 SMART SM00642 33 361 2.5E-42 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_11160 39da485636d5e5a85bf79d72953dd576 420 Gene3D G3DSA:3.20.20.80 9 367 5.5E-74 T 14-10-2018 PACID_11160 39da485636d5e5a85bf79d72953dd576 420 Pfam PF00128 Alpha amylase, catalytic domain 50 149 3.6E-21 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_11160 39da485636d5e5a85bf79d72953dd576 420 Pfam PF00128 Alpha amylase, catalytic domain 156 323 9.3E-21 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_00650 4aee3221aab9f67a99f717bd92d2aa29 321 SUPERFAMILY SSF53300 72 219 1.48E-15 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_00650 4aee3221aab9f67a99f717bd92d2aa29 321 Pfam PF13519 von Willebrand factor type A domain 74 189 2.9E-13 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_00650 4aee3221aab9f67a99f717bd92d2aa29 321 Gene3D G3DSA:3.40.50.410 63 274 3.6E-29 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_00650 4aee3221aab9f67a99f717bd92d2aa29 321 SMART SM00327 71 248 1.7E-10 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_13910 507b7e6810722b144d23580b1ef3770b 405 SUPERFAMILY SSF56801 53 387 4.71E-55 T 14-10-2018 PACID_13910 507b7e6810722b144d23580b1ef3770b 405 Pfam PF00501 AMP-binding enzyme 56 299 1.1E-25 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PACID_13910 507b7e6810722b144d23580b1ef3770b 405 Pfam PF13193 AMP-binding enzyme C-terminal domain 308 382 2.8E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PACID_13910 507b7e6810722b144d23580b1ef3770b 405 Gene3D G3DSA:3.30.300.30 294 398 2.0E-20 T 14-10-2018 PACID_13910 507b7e6810722b144d23580b1ef3770b 405 Gene3D G3DSA:3.40.50.12780 15 292 8.5E-39 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 482 496 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 125 139 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 586 598 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 47 62 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 548 564 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 636 652 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 327 340 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 82 95 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR00418 DNA topoisomerase II family signature 566 583 3.4E-55 T 14-10-2018 PACID_16110 adea3672bd697357343830105b2e5d31 706 Gene3D G3DSA:3.30.565.10 14 243 7.6E-73 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_16110 adea3672bd697357343830105b2e5d31 706 Gene3D G3DSA:3.40.50.670 461 706 1.9E-84 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_16110 adea3672bd697357343830105b2e5d31 706 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 637 692 6.6E-25 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 SUPERFAMILY SSF54211 303 452 3.03E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_16110 adea3672bd697357343830105b2e5d31 706 SMART SM00387 43 203 2.9E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 657 669 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 260 282 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 370 386 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 18 28 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 532 541 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 224 237 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 436 456 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 209 224 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 PRINTS PR01159 DNA gyrase subunit B signature 673 689 8.1E-36 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_16110 adea3672bd697357343830105b2e5d31 706 SMART SM00433 47 697 3.4E-238 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_16110 adea3672bd697357343830105b2e5d31 706 Pfam PF00204 DNA gyrase B 261 452 1.6E-47 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_16110 adea3672bd697357343830105b2e5d31 706 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 43 147 5.9E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_16110 adea3672bd697357343830105b2e5d31 706 SUPERFAMILY SSF56719 456 695 4.45E-74 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PACID_16110 adea3672bd697357343830105b2e5d31 706 Gene3D G3DSA:3.30.230.10 282 460 2.6E-47 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_16110 adea3672bd697357343830105b2e5d31 706 Pfam PF01751 Toprim domain 481 589 5.4E-13 T 14-10-2018 IPR006171 TOPRIM domain PACID_16110 adea3672bd697357343830105b2e5d31 706 SUPERFAMILY SSF55874 18 237 6.81E-54 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_16110 adea3672bd697357343830105b2e5d31 706 ProSitePatterns PS00177 DNA topoisomerase II signature. 484 492 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 SUPERFAMILY SSF52518 373 569 1.68E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 Gene3D G3DSA:3.40.50.970 369 579 3.9E-70 T 14-10-2018 PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 SUPERFAMILY SSF52467 194 362 4.31E-58 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 546 8.0E-47 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 11 568 5.4E-226 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 Gene3D G3DSA:3.40.50.1220 195 362 5.1E-61 T 14-10-2018 PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 Gene3D G3DSA:3.40.50.970 3 186 2.6E-68 T 14-10-2018 PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 SUPERFAMILY SSF52518 6 191 2.22E-60 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 178 3.7E-55 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PACID_20670 92ba99e4b7ce1936320966679b58fa9a 595 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 335 3.5E-47 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PACID_05710 79581c02c7dd2d8bc6a29b0250d7610d 479 SMART SM00332 1 236 3.3E-11 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PACID_05710 79581c02c7dd2d8bc6a29b0250d7610d 479 Gene3D G3DSA:3.60.40.10 4 239 3.3E-58 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PACID_05710 79581c02c7dd2d8bc6a29b0250d7610d 479 Pfam PF13672 Protein phosphatase 2C 21 195 4.2E-11 T 14-10-2018 PACID_05710 79581c02c7dd2d8bc6a29b0250d7610d 479 SUPERFAMILY SSF81606 6 237 1.83E-57 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PACID_05710 79581c02c7dd2d8bc6a29b0250d7610d 479 SMART SM00331 13 238 6.3E-27 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 SUPERFAMILY SSF53955 72 286 1.63E-66 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 Pfam PF00912 Transglycosylase 81 268 3.9E-58 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 Pfam PF03793 PASTA domain 708 767 3.0E-7 T 14-10-2018 IPR005543 PASTA domain PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 SMART SM00740 704 768 3.7E-6 T 14-10-2018 IPR005543 PASTA domain PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 SUPERFAMILY SSF56601 250 702 1.22E-74 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 Gene3D G3DSA:1.10.3810.10 74 284 1.5E-71 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 Pfam PF00905 Penicillin binding protein transpeptidase domain 368 634 2.5E-31 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 Gene3D G3DSA:3.40.710.10 318 708 1.0E-82 T 14-10-2018 PACID_29170 da2f29b75e434cc3b48d6be839249dfd 812 Gene3D G3DSA:3.30.10.20 709 769 4.8E-11 T 14-10-2018 PACID_03050 2620982463d1005da2b79554e84a882b 282 SUPERFAMILY SSF51430 7 273 1.17E-78 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_03050 2620982463d1005da2b79554e84a882b 282 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 43 60 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PACID_03050 2620982463d1005da2b79554e84a882b 282 PIRSF PIRSF000097 2 279 2.8E-66 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_03050 2620982463d1005da2b79554e84a882b 282 Pfam PF00248 Aldo/keto reductase family 18 203 3.4E-31 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_03050 2620982463d1005da2b79554e84a882b 282 Pfam PF00248 Aldo/keto reductase family 209 269 2.3E-7 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_03050 2620982463d1005da2b79554e84a882b 282 Gene3D G3DSA:3.20.20.100 1 279 1.8E-91 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_03050 2620982463d1005da2b79554e84a882b 282 PRINTS PR00069 Aldo-keto reductase signature 95 113 8.9E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_03050 2620982463d1005da2b79554e84a882b 282 PRINTS PR00069 Aldo-keto reductase signature 168 197 8.9E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_03050 2620982463d1005da2b79554e84a882b 282 PRINTS PR00069 Aldo-keto reductase signature 205 229 8.9E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_03050 2620982463d1005da2b79554e84a882b 282 PRINTS PR00069 Aldo-keto reductase signature 39 63 8.9E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_03050 2620982463d1005da2b79554e84a882b 282 PRINTS PR00069 Aldo-keto reductase signature 134 151 8.9E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 279 292 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 Gene3D G3DSA:3.40.50.10490 100 305 2.0E-213 T 14-10-2018 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 Pfam PF00342 Phosphoglucose isomerase 54 552 4.0E-201 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 Gene3D G3DSA:1.10.1390.10 517 559 2.5E-16 T 14-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 Gene3D G3DSA:3.40.50.10490 13 516 2.0E-213 T 14-10-2018 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 507 524 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 152 171 3.3E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 275 293 3.3E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 507 520 3.3E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 493 507 3.3E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 475 493 3.3E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 PRINTS PR00662 Glucose-6-phosphate isomerase signature 352 373 3.3E-52 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 SUPERFAMILY SSF53697 6 559 1.42E-196 T 14-10-2018 PACID_06420 c6dca0b815dc70d84fcb7998de31e7d5 560 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 48 534 39.625 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_06410 c51f62c6eadd23e8c3e446dddc9c0808 240 Gene3D G3DSA:3.20.20.70 36 239 2.4E-30 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_06410 c51f62c6eadd23e8c3e446dddc9c0808 240 Pfam PF01081 KDPG and KHG aldolase 39 207 4.6E-8 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PACID_06410 c51f62c6eadd23e8c3e446dddc9c0808 240 SUPERFAMILY SSF51569 38 219 2.38E-24 T 14-10-2018 PACID_06830 9d333b85c651fd586d3891af097985a7 474 Pfam PF01425 Amidase 28 456 7.1E-92 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_06830 9d333b85c651fd586d3891af097985a7 474 ProSitePatterns PS00571 Amidases signature. 155 186 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 PACID_06830 9d333b85c651fd586d3891af097985a7 474 SUPERFAMILY SSF75304 7 466 7.19E-114 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_06830 9d333b85c651fd586d3891af097985a7 474 Gene3D G3DSA:3.90.1300.10 8 472 7.8E-120 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_31870 2ed7c1466d31f0801a58d863c642a58b 559 SMART SM00642 13 414 3.0E-111 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_31870 2ed7c1466d31f0801a58d863c642a58b 559 Gene3D G3DSA:3.90.400.10 105 177 1.6E-138 T 14-10-2018 PACID_31870 2ed7c1466d31f0801a58d863c642a58b 559 Gene3D G3DSA:3.20.20.80 5 481 1.6E-138 T 14-10-2018 PACID_31870 2ed7c1466d31f0801a58d863c642a58b 559 Pfam PF00128 Alpha amylase, catalytic domain 28 391 5.6E-71 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_31870 2ed7c1466d31f0801a58d863c642a58b 559 SUPERFAMILY SSF51445 4 482 2.88E-117 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31870 2ed7c1466d31f0801a58d863c642a58b 559 Pfam PF11941 Domain of unknown function (DUF3459) 473 552 1.2E-4 T 14-10-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) PACID_09900 8d5d19de594bc30cb6b3b73dfed46423 173 SMART SM00347 42 145 3.7E-22 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_09900 8d5d19de594bc30cb6b3b73dfed46423 173 Pfam PF12802 MarR family 48 109 7.6E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_09900 8d5d19de594bc30cb6b3b73dfed46423 173 Gene3D G3DSA:1.10.10.10 1 160 1.4E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_09900 8d5d19de594bc30cb6b3b73dfed46423 173 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 121 2.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_09900 8d5d19de594bc30cb6b3b73dfed46423 173 PRINTS PR00598 Bacterial regulatory protein MarR family signature 86 101 2.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_09900 8d5d19de594bc30cb6b3b73dfed46423 173 PRINTS PR00598 Bacterial regulatory protein MarR family signature 135 155 2.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_09900 8d5d19de594bc30cb6b3b73dfed46423 173 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 85 2.0E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_09900 8d5d19de594bc30cb6b3b73dfed46423 173 SUPERFAMILY SSF46785 10 158 2.15E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_04890 c827f809c1a6f2edfa0f7e3d50f9092f 365 Pfam PF13579 Glycosyl transferase 4-like domain 15 155 1.2E-9 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_04890 c827f809c1a6f2edfa0f7e3d50f9092f 365 SUPERFAMILY SSF53756 14 357 2.88E-36 T 14-10-2018 PACID_04890 c827f809c1a6f2edfa0f7e3d50f9092f 365 Gene3D G3DSA:3.40.50.2000 12 178 1.2E-7 T 14-10-2018 PACID_04890 c827f809c1a6f2edfa0f7e3d50f9092f 365 Gene3D G3DSA:3.40.50.2000 179 342 8.1E-21 T 14-10-2018 PACID_04890 c827f809c1a6f2edfa0f7e3d50f9092f 365 Pfam PF13692 Glycosyl transferases group 1 183 326 1.5E-12 T 14-10-2018 PACID_31600 afa1a150999bcff944072c44e8410df5 364 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 265 281 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PACID_31600 afa1a150999bcff944072c44e8410df5 364 Gene3D G3DSA:3.40.50.720 134 328 3.7E-78 T 14-10-2018 PACID_31600 afa1a150999bcff944072c44e8410df5 364 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 72 356 1.2E-13 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PACID_31600 afa1a150999bcff944072c44e8410df5 364 SUPERFAMILY SSF51735 138 327 3.38E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_31600 afa1a150999bcff944072c44e8410df5 364 Gene3D G3DSA:3.40.50.720 65 338 3.7E-78 T 14-10-2018 PACID_31600 afa1a150999bcff944072c44e8410df5 364 SUPERFAMILY SSF52283 70 174 1.08E-22 T 14-10-2018 PACID_31600 afa1a150999bcff944072c44e8410df5 364 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 147 326 2.1E-50 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PACID_31600 afa1a150999bcff944072c44e8410df5 364 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 188 215 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 SUPERFAMILY SSF55124 9 159 8.34E-40 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 Gene3D G3DSA:3.30.413.10 408 553 1.9E-32 T 14-10-2018 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 SUPERFAMILY SSF56014 160 321 2.49E-44 T 14-10-2018 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 PRINTS PR00397 Sirohaem Fe-binding site signature 459 477 7.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 PRINTS PR00397 Sirohaem Fe-binding site signature 412 430 7.7E-9 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 Gene3D G3DSA:3.90.480.20 22 397 7.8E-122 T 14-10-2018 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 SUPERFAMILY SSF55124 329 404 7.29E-18 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 Gene3D G3DSA:3.30.413.10 152 330 7.8E-122 T 14-10-2018 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 411 534 2.3E-10 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 335 400 1.1E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 90 150 4.1E-17 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 459 475 - T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 SUPERFAMILY SSF56014 410 551 4.45E-31 T 14-10-2018 PACID_27260 c63cd821a39a96e16db72d5c01c769db 553 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 162 313 6.5E-37 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 PACID_16620 7fa593a1715ac622729cfe92e4c09b1c 176 SUPERFAMILY SSF49879 76 169 4.59E-29 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 PACID_16620 7fa593a1715ac622729cfe92e4c09b1c 176 Pfam PF00498 FHA domain 99 162 4.6E-17 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_16620 7fa593a1715ac622729cfe92e4c09b1c 176 SMART SM00240 97 147 3.0E-11 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_16620 7fa593a1715ac622729cfe92e4c09b1c 176 Gene3D G3DSA:2.60.200.20 49 173 2.0E-34 T 14-10-2018 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 SMART SM00387 714 836 1.2E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Gene3D G3DSA:3.30.565.10 676 835 4.1E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Gene3D G3DSA:3.40.50.300 2 200 1.2E-59 T 14-10-2018 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 SMART SM00388 604 672 1.6E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 SUPERFAMILY SSF55874 675 835 2.1E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 SUPERFAMILY SSF52402 222 336 6.2E-9 T 14-10-2018 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Gene3D G3DSA:1.10.287.130 593 675 1.9E-8 T 14-10-2018 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 715 831 1.1E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Pfam PF13493 Domain of unknown function (DUF4118) 380 484 6.4E-20 T 14-10-2018 IPR025201 Sensor protein KdpD, transmembrane domain PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Gene3D G3DSA:1.20.120.620 374 479 1.0E-9 T 14-10-2018 IPR038318 KdpD, transmembrane domain superfamily PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 763 777 2.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 796 814 2.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 PRINTS PR00344 Bacterial sensor protein C-terminal signature 781 791 2.1E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Pfam PF00582 Universal stress protein family 271 336 2.1E-5 T 14-10-2018 IPR006016 UspA PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 5 200 1.4E-60 T 14-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Pfam PF00512 His Kinase A (phospho-acceptor) domain 606 672 4.8E-7 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 SUPERFAMILY SSF47384 594 672 1.82E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_29820 48c4fd4b9efc073a173fb63efd447b52 840 Gene3D G3DSA:3.40.50.620 203 339 1.1E-5 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_05430 808743edea5e18b473011e6cc9ba1e58 346 SUPERFAMILY SSF53822 72 322 2.55E-58 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_05430 808743edea5e18b473011e6cc9ba1e58 346 Gene3D G3DSA:1.10.260.40 5 65 9.9E-23 T 14-10-2018 PACID_05430 808743edea5e18b473011e6cc9ba1e58 346 Gene3D G3DSA:3.40.50.2300 172 298 3.2E-70 T 14-10-2018 PACID_05430 808743edea5e18b473011e6cc9ba1e58 346 SMART SM00354 12 82 5.0E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_05430 808743edea5e18b473011e6cc9ba1e58 346 Pfam PF13377 Periplasmic binding protein-like domain 180 340 1.2E-40 T 14-10-2018 PACID_05430 808743edea5e18b473011e6cc9ba1e58 346 Gene3D G3DSA:3.40.50.2300 66 315 3.2E-70 T 14-10-2018 PACID_05430 808743edea5e18b473011e6cc9ba1e58 346 SUPERFAMILY SSF47413 12 68 2.72E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_05430 808743edea5e18b473011e6cc9ba1e58 346 Pfam PF00356 Bacterial regulatory proteins, lacI family 17 59 8.3E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_19580 e7bf819e5b1132a5bc474dffba2fa1ff 336 SUPERFAMILY SSF51126 84 319 1.02E-8 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 396 470 17.055 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 Gene3D G3DSA:3.30.1280.10 396 472 1.3E-18 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 SUPERFAMILY SSF56104 5 286 1.18E-99 T 14-10-2018 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 Pfam PF01259 SAICAR synthetase 12 259 5.0E-102 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 12 285 3.8E-67 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 398 470 2.1E-19 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 SUPERFAMILY SSF82697 395 471 4.88E-19 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 Gene3D G3DSA:3.30.470.20 95 239 3.1E-61 T 14-10-2018 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 405 471 2.0E-24 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 9 286 26.364 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 ProSitePatterns PS01057 SAICAR synthetase signature 1. 96 110 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_27280 fdf89ea92a51b3bd0b705ccef729d457 472 Gene3D G3DSA:3.30.200.20 3 94 6.9E-29 T 14-10-2018 PACID_21580 85c88f0cd40f75f551b61b2ee2f9a3cf 200 Gene3D G3DSA:3.40.50.150 2 199 1.1E-47 T 14-10-2018 PACID_21580 85c88f0cd40f75f551b61b2ee2f9a3cf 200 PIRSF PIRSF004553 3 197 6.8E-44 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 PACID_21580 85c88f0cd40f75f551b61b2ee2f9a3cf 200 Pfam PF03602 Conserved hypothetical protein 95 5 193 2.0E-43 T 14-10-2018 PACID_21580 85c88f0cd40f75f551b61b2ee2f9a3cf 200 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 130 136 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PACID_21580 85c88f0cd40f75f551b61b2ee2f9a3cf 200 SUPERFAMILY SSF53335 4 184 8.15E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_14390 a941a638fbba57cd51b48868f4f52b12 318 Gene3D G3DSA:3.40.190.10 71 298 4.6E-56 T 14-10-2018 PACID_14390 a941a638fbba57cd51b48868f4f52b12 318 SMART SM00062 78 305 3.3E-49 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_14390 a941a638fbba57cd51b48868f4f52b12 318 SUPERFAMILY SSF53850 10 300 1.22E-48 T 14-10-2018 PACID_14390 a941a638fbba57cd51b48868f4f52b12 318 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 87 297 7.2E-40 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_14390 a941a638fbba57cd51b48868f4f52b12 318 Gene3D G3DSA:3.40.190.10 172 263 4.6E-56 T 14-10-2018 PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 PIRSF PIRSF006630 9 707 2.8E-154 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 Pfam PF00795 Carbon-nitrogen hydrolase 13 297 1.3E-16 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 TIGRFAM TIGR00552 nadE: NAD+ synthetase 391 550 7.1E-19 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 Gene3D G3DSA:1.10.10.1140 596 716 2.3E-46 T 14-10-2018 PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 SUPERFAMILY SSF56317 11 309 1.57E-51 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 Hamap MF_02090 Glutamine-dependent NAD(+) synthetase [nadE]. 12 705 27.729 T 14-10-2018 IPR014445 Glutamine-dependent NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.5.1|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 Gene3D G3DSA:3.60.110.10 1 324 6.6E-84 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 SUPERFAMILY SSF52402 363 683 2.65E-66 T 14-10-2018 PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 Pfam PF02540 NAD synthase 386 607 1.6E-24 T 14-10-2018 IPR022310 NAD/GMP synthase PACID_33070 0064834870a8e98d62a09612c2e2cd40 716 Gene3D G3DSA:3.40.50.620 361 581 5.6E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 Gene3D G3DSA:1.10.10.10 12 61 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 29 55 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 Gene3D G3DSA:3.30.70.920 62 151 4.0E-17 T 14-10-2018 PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 Pfam PF13404 AsnC-type helix-turn-helix domain 11 52 1.8E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 SUPERFAMILY SSF46785 11 68 4.74E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 27 38 2.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 11 27 2.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 38 57 2.6E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 SMART SM00344 11 118 1.2E-34 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 SUPERFAMILY SSF54909 73 150 2.82E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_16970 ddcea1cd653f83b28f6517b3c39f4b70 158 Pfam PF01037 Lrp/AsnC ligand binding domain 87 147 1.5E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 SUPERFAMILY SSF48019 269 452 3.23E-75 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 Gene3D G3DSA:1.10.8.60 181 255 7.6E-10 T 14-10-2018 PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 Pfam PF16193 AAA C-terminal domain 207 283 6.8E-26 T 14-10-2018 IPR032423 AAA C-terminal domain PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 34 155 1.0E-14 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 Gene3D G3DSA:3.40.50.300 22 179 3.8E-39 T 14-10-2018 PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 Gene3D G3DSA:1.10.3710.10 362 455 1.7E-27 T 14-10-2018 PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 Pfam PF12002 MgsA AAA+ ATPase C terminal 284 449 5.3E-71 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 SUPERFAMILY SSF52540 30 252 1.2E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 Gene3D G3DSA:1.20.272.10 257 361 6.2E-47 T 14-10-2018 PACID_17840 aa1c77d48e5fa3836e9dfc20e56a057d 457 SMART SM00382 65 181 6.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_32340 35ee2d3bfc348a35e26010947ae89657 209 PIRSF PIRSF002070 158 192 1800.0 T 14-10-2018 PACID_32340 35ee2d3bfc348a35e26010947ae89657 209 PIRSF PIRSF002070 1 125 5.8E-29 T 14-10-2018 PACID_32340 35ee2d3bfc348a35e26010947ae89657 209 Gene3D G3DSA:2.40.50.140 1 120 6.6E-41 T 14-10-2018 PACID_32340 35ee2d3bfc348a35e26010947ae89657 209 SUPERFAMILY SSF50249 6 209 1.1E-39 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_32340 35ee2d3bfc348a35e26010947ae89657 209 Hamap MF_00984 Single-stranded DNA-binding protein. 4 113 30.097 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PACID_32340 35ee2d3bfc348a35e26010947ae89657 209 Pfam PF00436 Single-strand binding protein family 6 106 4.5E-29 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PACID_32340 35ee2d3bfc348a35e26010947ae89657 209 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 5 209 7.6E-30 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 PACID_27930 53184f75bd6ba7c9ca8c4c758c718e32 181 SUPERFAMILY SSF88659 117 174 3.18E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_27930 53184f75bd6ba7c9ca8c4c758c718e32 181 Pfam PF08281 Sigma-70, region 4 118 167 4.2E-13 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_27930 53184f75bd6ba7c9ca8c4c758c718e32 181 Gene3D G3DSA:1.10.10.10 117 176 4.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_05990 089cd4735eb286bbdba233b253bc82c5 242 PIRSF PIRSF001435 5 220 9.2E-42 T 14-10-2018 PACID_05990 089cd4735eb286bbdba233b253bc82c5 242 Gene3D G3DSA:1.10.340.30 25 158 2.2E-29 T 14-10-2018 PACID_05990 089cd4735eb286bbdba233b253bc82c5 242 SUPERFAMILY SSF48150 9 216 6.91E-39 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PACID_05990 089cd4735eb286bbdba233b253bc82c5 242 Gene3D G3DSA:1.10.1670.10 159 217 2.2E-29 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PACID_05990 089cd4735eb286bbdba233b253bc82c5 242 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 180 6.4E-8 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PACID_05990 089cd4735eb286bbdba233b253bc82c5 242 SMART SM00478 39 213 8.5E-18 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PACID_29300 480efcb9ad6e5bab8e647ce9d754665a 552 Gene3D G3DSA:3.10.105.10 313 525 1.4E-99 T 14-10-2018 PACID_29300 480efcb9ad6e5bab8e647ce9d754665a 552 Gene3D G3DSA:3.90.76.10 81 210 1.4E-99 T 14-10-2018 PACID_29300 480efcb9ad6e5bab8e647ce9d754665a 552 PIRSF PIRSF002741 1 551 3.6E-72 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PACID_29300 480efcb9ad6e5bab8e647ce9d754665a 552 SUPERFAMILY SSF53850 45 551 1.59E-95 T 14-10-2018 PACID_29300 480efcb9ad6e5bab8e647ce9d754665a 552 Gene3D G3DSA:3.40.190.10 62 538 1.4E-99 T 14-10-2018 PACID_29300 480efcb9ad6e5bab8e647ce9d754665a 552 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 473 1.4E-51 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PACID_21280 af40b94c23dc0cd4f99a270377e46848 209 Gene3D G3DSA:3.30.420.10 9 208 7.0E-63 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_21280 af40b94c23dc0cd4f99a270377e46848 209 SUPERFAMILY SSF53098 12 202 2.88E-56 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_21280 af40b94c23dc0cd4f99a270377e46848 209 Hamap MF_00052_B Ribonuclease HII [rnhB]. 19 200 32.688 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 PACID_21280 af40b94c23dc0cd4f99a270377e46848 209 Pfam PF01351 Ribonuclease HII 21 200 4.8E-34 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain PACID_06970 2dc668b61605f4d47df2426f98d8f188 288 Gene3D G3DSA:3.40.50.1000 27 285 1.7E-68 T 14-10-2018 IPR023214 HAD superfamily PACID_06970 2dc668b61605f4d47df2426f98d8f188 288 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 79 281 2.8E-65 T 14-10-2018 PACID_06970 2dc668b61605f4d47df2426f98d8f188 288 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 82 252 3.0E-32 T 14-10-2018 PACID_06970 2dc668b61605f4d47df2426f98d8f188 288 Pfam PF12710 haloacid dehalogenase-like hydrolase 84 250 6.6E-28 T 14-10-2018 PACID_06970 2dc668b61605f4d47df2426f98d8f188 288 SUPERFAMILY SSF56784 82 284 5.97E-47 T 14-10-2018 IPR036412 HAD-like superfamily PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 SMART SM00984 300 387 2.9E-13 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 PIRSF PIRSF000124 1 388 1.3E-123 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 Gene3D G3DSA:3.40.50.720 222 388 3.7E-63 T 14-10-2018 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 SUPERFAMILY SSF52413 283 387 1.57E-24 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 SUPERFAMILY SSF51735 1 194 2.4E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 SUPERFAMILY SSF48179 191 287 1.87E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 1.3E-26 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 PIRSF PIRSF500134 1 341 4.0E-110 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 PIRSF PIRSF500134 338 388 0.043 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 Gene3D G3DSA:3.40.50.720 1 193 5.4E-53 T 14-10-2018 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 2.2E-98 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 Gene3D G3DSA:1.20.5.100 194 220 3.4E-19 T 14-10-2018 PACID_11170 4f9d992338dbd74233fd1a750ebbe2f0 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 1.7E-31 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 Pfam PF02254 TrkA-N domain 3 118 4.8E-24 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 Gene3D G3DSA:3.40.50.720 2 132 6.0E-30 T 14-10-2018 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 1.9E-8 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 PRINTS PR00335 TrkA potassium uptake protein signature 59 69 1.9E-8 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 1.9E-8 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 PRINTS PR00335 TrkA potassium uptake protein signature 72 86 1.9E-8 T 14-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 Gene3D G3DSA:3.30.70.1450 135 219 4.1E-14 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 SUPERFAMILY SSF51735 1 145 3.77E-30 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 Pfam PF02080 TrkA-C domain 149 216 1.5E-8 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PACID_16280 668f6b38a47d1bd0d654d3de131bbe03 219 SUPERFAMILY SSF116726 133 215 5.49E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 421 440 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 SUPERFAMILY SSF52518 2 175 5.44E-49 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 Gene3D G3DSA:3.40.50.970 355 547 3.9E-57 T 14-10-2018 PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 SUPERFAMILY SSF52518 361 543 5.18E-55 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 Gene3D G3DSA:3.40.50.970 1 175 4.5E-59 T 14-10-2018 PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 324 3.5E-34 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 Gene3D G3DSA:3.40.50.1220 183 349 4.2E-45 T 14-10-2018 PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 529 9.5E-40 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 SUPERFAMILY SSF52467 183 368 1.69E-41 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PACID_00370 9fc1204377ce8eebb9f9813b10fd676d 551 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 3 166 6.0E-51 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PACID_31520 1e7dec695473b054980ec829beeccec1 302 Gene3D G3DSA:3.10.520.20 131 296 5.8E-27 T 14-10-2018 PACID_31520 1e7dec695473b054980ec829beeccec1 302 Gene3D G3DSA:3.10.520.20 54 130 9.2E-7 T 14-10-2018 PACID_31520 1e7dec695473b054980ec829beeccec1 302 Pfam PF02424 ApbE family 134 267 2.3E-22 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 PACID_31520 1e7dec695473b054980ec829beeccec1 302 Pfam PF02424 ApbE family 21 127 8.1E-5 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 PACID_31520 1e7dec695473b054980ec829beeccec1 302 SUPERFAMILY SSF143631 62 281 8.89E-38 T 14-10-2018 IPR003374 ApbE-like superfamily PACID_33040 7cd6d0699fa1d7bb05fccaa016867134 75 Pfam PF01402 Ribbon-helix-helix protein, copG family 3 35 4.4E-6 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_33040 7cd6d0699fa1d7bb05fccaa016867134 75 SUPERFAMILY SSF47598 2 37 2.3E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PACID_05370 972070b87ce329764af8553d4a1de7a4 380 Gene3D G3DSA:1.20.1090.10 180 380 5.5E-48 T 14-10-2018 PACID_05370 972070b87ce329764af8553d4a1de7a4 380 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 372 1.1E-94 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 PACID_05370 972070b87ce329764af8553d4a1de7a4 380 Gene3D G3DSA:3.40.50.1970 1 178 3.7E-45 T 14-10-2018 PACID_05370 972070b87ce329764af8553d4a1de7a4 380 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 167 195 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 PACID_05370 972070b87ce329764af8553d4a1de7a4 380 SUPERFAMILY SSF56796 3 377 7.72E-93 T 14-10-2018 PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 Gene3D G3DSA:3.50.50.60 32 236 9.0E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 44 159 1.3E-7 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 45 53 2.4E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 196 214 2.4E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 161 182 2.4E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 186 208 1.7E-7 T 14-10-2018 PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 175 1.7E-7 T 14-10-2018 PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 45 63 1.7E-7 T 14-10-2018 PACID_33850 83a5cd26a81c8fbebdd0804d63a19fbb 237 SUPERFAMILY SSF51905 43 234 3.97E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_31750 59a3ddb97cf0e6e171fd9d0485dec8cc 359 Gene3D G3DSA:1.10.3720.10 7 293 2.1E-63 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31750 59a3ddb97cf0e6e171fd9d0485dec8cc 359 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 292 3.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_31750 59a3ddb97cf0e6e171fd9d0485dec8cc 359 SUPERFAMILY SSF161098 13 299 7.98E-56 T 14-10-2018 IPR035906 MetI-like superfamily PACID_17780 80c18e447e188edd87575d6d7e065e53 369 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 62 362 2.0E-55 T 14-10-2018 IPR003770 Endolytic murein transglycosylase PACID_17780 80c18e447e188edd87575d6d7e065e53 369 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 23 360 30.571 T 14-10-2018 IPR003770 Endolytic murein transglycosylase PACID_17780 80c18e447e188edd87575d6d7e065e53 369 Gene3D G3DSA:1.10.8.1150 61 136 4.7E-12 T 14-10-2018 PACID_17780 80c18e447e188edd87575d6d7e065e53 369 Pfam PF02618 YceG-like family 66 357 3.3E-73 T 14-10-2018 IPR003770 Endolytic murein transglycosylase PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 Pfam PF05746 DALR anticodon binding domain 429 556 4.6E-36 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 SUPERFAMILY SSF52374 104 420 4.5E-77 T 14-10-2018 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 17 556 2.5E-142 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 SUPERFAMILY SSF47323 424 556 2.55E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 Pfam PF00750 tRNA synthetases class I (R) 90 392 8.8E-100 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 SMART SM00836 429 556 6.6E-45 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 Gene3D G3DSA:3.40.50.620 102 421 9.3E-96 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 117 128 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 Gene3D G3DSA:3.30.1360.70 2 100 3.1E-24 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 SMART SM01016 2 81 5.1E-28 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 9 81 9.4E-21 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 Gene3D G3DSA:1.10.730.10 423 556 5.3E-41 T 14-10-2018 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 2 556 25.623 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 SUPERFAMILY SSF55190 11 91 9.29E-20 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 140 4.9E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 109 124 4.9E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 148 161 4.9E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PACID_06470 5de38af27b230fcbcb2d492c6305a485 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 291 312 4.9E-24 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 PACID_08910 2d8154f78a8a2d016a5a4958f4e5fb5f 195 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 27 143 6.3E-7 T 14-10-2018 PACID_08910 2d8154f78a8a2d016a5a4958f4e5fb5f 195 SUPERFAMILY SSF53335 12 175 4.43E-28 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_08910 2d8154f78a8a2d016a5a4958f4e5fb5f 195 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 27 145 4.4E-27 T 14-10-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00860+2.1.1.196|MetaCyc: PWY-7377 PACID_08910 2d8154f78a8a2d016a5a4958f4e5fb5f 195 Gene3D G3DSA:3.40.50.150 10 195 9.1E-58 T 14-10-2018 PACID_00820 1019617701e5d93c04f83fab1cdfc4e8 354 Pfam PF01032 FecCD transport family 27 349 2.2E-81 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PACID_00820 1019617701e5d93c04f83fab1cdfc4e8 354 Gene3D G3DSA:1.10.3470.10 15 354 9.0E-90 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_00820 1019617701e5d93c04f83fab1cdfc4e8 354 SUPERFAMILY SSF81345 11 350 1.83E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_13590 9538a15e5c2b1bdbb7498ea478740c8e 193 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 87 185 6.8E-11 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 PACID_13590 9538a15e5c2b1bdbb7498ea478740c8e 193 Gene3D G3DSA:2.30.30.110 85 186 5.8E-7 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PACID_13590 9538a15e5c2b1bdbb7498ea478740c8e 193 SUPERFAMILY SSF50118 84 190 6.32E-12 T 14-10-2018 PACID_16270 af9e42784711b93173f0991fddd6cce3 130 PIRSF PIRSF006910 1 130 6.5E-48 T 14-10-2018 IPR016499 Nucleic acid binding protein, Rv2694c, predicted PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 SUPERFAMILY SSF55973 9 114 2.35E-42 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 SUPERFAMILY SSF55973 250 398 3.18E-62 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 130 140 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 7 400 52.908 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 Gene3D G3DSA:3.30.300.10 16 287 7.7E-160 T 14-10-2018 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 SUPERFAMILY SSF55973 126 249 1.1E-42 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 Gene3D G3DSA:3.30.300.10 10 250 7.7E-160 T 14-10-2018 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 Gene3D G3DSA:3.30.300.10 107 391 7.7E-160 T 14-10-2018 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 9 106 6.3E-39 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 10 397 6.1E-159 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 250 388 4.4E-63 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 Pfam PF02772 S-adenosylmethionine synthetase, central domain 129 248 2.9E-41 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 276 284 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_17660 9b782e0bf15e3973820b677e1a779e38 402 PIRSF PIRSF000497 4 401 7.3E-155 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 PACID_13800 5383342a8d65cd80e6557e1d284e8fbd 581 Gene3D G3DSA:3.40.50.300 194 400 2.1E-14 T 14-10-2018 PACID_13800 5383342a8d65cd80e6557e1d284e8fbd 581 SMART SM00487 12 192 2.1E-11 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_13800 5383342a8d65cd80e6557e1d284e8fbd 581 SUPERFAMILY SSF52540 33 398 3.12E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13800 5383342a8d65cd80e6557e1d284e8fbd 581 Gene3D G3DSA:3.40.50.300 9 183 9.5E-22 T 14-10-2018 PACID_13800 5383342a8d65cd80e6557e1d284e8fbd 581 SUPERFAMILY SSF52540 10 221 8.21E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13800 5383342a8d65cd80e6557e1d284e8fbd 581 Pfam PF04851 Type III restriction enzyme, res subunit 15 166 3.2E-13 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PACID_33970 eeae2ab7970752d3370ad56675ddd7e3 377 Gene3D G3DSA:3.90.180.10 13 366 3.4E-102 T 14-10-2018 PACID_33970 eeae2ab7970752d3370ad56675ddd7e3 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 161 8.4E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_33970 eeae2ab7970752d3370ad56675ddd7e3 377 SMART SM00829 16 373 2.8E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_33970 eeae2ab7970752d3370ad56675ddd7e3 377 SUPERFAMILY SSF50129 1 207 2.28E-50 T 14-10-2018 IPR011032 GroES-like superfamily PACID_33970 eeae2ab7970752d3370ad56675ddd7e3 377 SUPERFAMILY SSF51735 167 340 1.01E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_33970 eeae2ab7970752d3370ad56675ddd7e3 377 Gene3D G3DSA:3.40.50.720 182 319 3.4E-102 T 14-10-2018 PACID_33970 eeae2ab7970752d3370ad56675ddd7e3 377 Pfam PF00107 Zinc-binding dehydrogenase 205 334 7.1E-29 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_10220 8598dcf9feb0e8b254aae69b287a588b 369 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 25 364 43.187 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 PACID_10220 8598dcf9feb0e8b254aae69b287a588b 369 Pfam PF01409 tRNA synthetases class II core domain (F) 109 363 8.6E-94 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 PACID_10220 8598dcf9feb0e8b254aae69b287a588b 369 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 70 362 1.7E-85 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 PACID_10220 8598dcf9feb0e8b254aae69b287a588b 369 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 37 104 2.3E-16 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 PACID_10220 8598dcf9feb0e8b254aae69b287a588b 369 SUPERFAMILY SSF55681 109 362 4.1E-73 T 14-10-2018 PACID_10220 8598dcf9feb0e8b254aae69b287a588b 369 SUPERFAMILY SSF46589 29 115 5.75E-15 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 PACID_10220 8598dcf9feb0e8b254aae69b287a588b 369 Gene3D G3DSA:3.30.930.10 25 365 4.9E-104 T 14-10-2018 PACID_02050 cd0d1a7cdd12f2b32c363dc4e0f3c167 413 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 9 396 19.144 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_02050 cd0d1a7cdd12f2b32c363dc4e0f3c167 413 Gene3D G3DSA:1.20.1530.10 6 396 1.1E-122 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily PACID_02050 cd0d1a7cdd12f2b32c363dc4e0f3c167 413 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 12 388 1.9E-84 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_02050 cd0d1a7cdd12f2b32c363dc4e0f3c167 413 Pfam PF06965 Na+/H+ antiporter 1 11 388 1.2E-118 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_20820 2164b6902b26655c2b43e5ca9645c87d 308 SUPERFAMILY SSF56349 9 299 5.3E-54 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PACID_20820 2164b6902b26655c2b43e5ca9645c87d 308 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 12 95 6.3E-19 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 PACID_20820 2164b6902b26655c2b43e5ca9645c87d 308 Gene3D G3DSA:1.10.150.130 9 103 5.8E-20 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PACID_20820 2164b6902b26655c2b43e5ca9645c87d 308 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 10 307 53.471 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD PACID_20820 2164b6902b26655c2b43e5ca9645c87d 308 Pfam PF00589 Phage integrase family 118 292 7.5E-44 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PACID_20820 2164b6902b26655c2b43e5ca9645c87d 308 Gene3D G3DSA:1.10.443.10 116 301 3.4E-58 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 17 139 39.581 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 Gene3D G3DSA:2.40.50.140 15 139 4.7E-62 T 14-10-2018 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 SUPERFAMILY SSF50249 18 139 1.03E-51 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 PIRSF PIRSF002133 17 139 2.1E-53 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 PRINTS PR01034 Ribosomal protein S12 signature 110 126 8.1E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 PRINTS PR01034 Ribosomal protein S12 signature 93 110 8.1E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 PRINTS PR01034 Ribosomal protein S12 signature 43 58 8.1E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 PRINTS PR01034 Ribosomal protein S12 signature 58 73 8.1E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 PRINTS PR01034 Ribosomal protein S12 signature 126 138 8.1E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 PRINTS PR01034 Ribosomal protein S12 signature 74 93 8.1E-58 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 18 139 4.1E-66 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 ProSitePatterns PS00055 Ribosomal protein S12 signature. 59 66 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25870 a922b4515f4c5e670e5a4ce992f58b78 139 Pfam PF00164 Ribosomal protein S12/S23 30 139 3.9E-42 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_09460 3de5f72e916456b58f56daa903d4f839 426 SUPERFAMILY SSF53218 220 344 6.06E-9 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PACID_09460 3de5f72e916456b58f56daa903d4f839 426 Gene3D G3DSA:3.40.980.10 199 349 8.1E-59 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PACID_09460 3de5f72e916456b58f56daa903d4f839 426 Gene3D G3DSA:2.170.190.11 76 165 8.1E-59 T 14-10-2018 PACID_09460 3de5f72e916456b58f56daa903d4f839 426 SUPERFAMILY SSF63867 364 424 4.19E-5 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_09460 3de5f72e916456b58f56daa903d4f839 426 Gene3D G3DSA:2.40.340.10 350 409 8.1E-59 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_09460 3de5f72e916456b58f56daa903d4f839 426 Pfam PF03454 MoeA C-terminal region (domain IV) 363 420 1.0E-8 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_09460 3de5f72e916456b58f56daa903d4f839 426 Pfam PF03453 MoeA N-terminal region (domain I and II) 36 191 1.2E-31 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_09460 3de5f72e916456b58f56daa903d4f839 426 Gene3D G3DSA:3.90.105.10 56 198 8.1E-59 T 14-10-2018 PACID_09460 3de5f72e916456b58f56daa903d4f839 426 SUPERFAMILY SSF63882 36 200 1.57E-31 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_18330 1d3a3c8bd072d7b34decf79cce92ada5 102 SUPERFAMILY SSF54909 1 85 4.13E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_18330 1d3a3c8bd072d7b34decf79cce92ada5 102 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 66 2.3E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PACID_18330 1d3a3c8bd072d7b34decf79cce92ada5 102 Gene3D G3DSA:3.30.70.100 1 94 2.4E-9 T 14-10-2018 PACID_13260 83d03a507d9432d2c99acd860026f974 145 Pfam PF00334 Nucleoside diphosphate kinase 5 136 5.0E-51 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 4 144 31.889 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 92 108 2.1E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 51 70 2.1E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 115 134 2.1E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 71 88 2.1E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 PRINTS PR01243 Nucleoside diphosphate kinase signature 7 29 2.1E-41 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 SMART SM00562 4 141 9.9E-69 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 Gene3D G3DSA:3.30.70.141 1 144 3.9E-56 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_13260 83d03a507d9432d2c99acd860026f974 145 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 115 123 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 PACID_13260 83d03a507d9432d2c99acd860026f974 145 SUPERFAMILY SSF54919 4 137 2.1E-52 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 PACID_00800 480908a33cb83db0594676d89d966ce2 235 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 146 229 8.3E-8 T 14-10-2018 PACID_00800 480908a33cb83db0594676d89d966ce2 235 SUPERFAMILY SSF52833 151 230 2.91E-15 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_00800 480908a33cb83db0594676d89d966ce2 235 Gene3D G3DSA:3.40.30.10 152 234 4.7E-16 T 14-10-2018 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 SUPERFAMILY SSF82771 18 101 9.02E-23 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Gene3D G3DSA:1.10.150.20 588 647 2.2E-20 T 14-10-2018 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 SUPERFAMILY SSF47781 553 647 2.83E-25 T 14-10-2018 IPR010994 RuvA domain 2-like PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Gene3D G3DSA:4.10.860.10 208 244 6.3E-7 T 14-10-2018 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 SMART SM00278 626 645 1.5 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 SMART SM00278 594 613 43.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 645 29.823 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Gene3D G3DSA:3.30.420.340 396 587 3.6E-55 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 SUPERFAMILY SSF46600 194 245 6.28E-12 T 14-10-2018 IPR036876 UVR domain superfamily PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Pfam PF01541 GIY-YIG catalytic domain 18 92 1.4E-11 T 14-10-2018 IPR000305 GIY-YIG endonuclease PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 403 580 6.4E-53 T 14-10-2018 IPR001162 UvrC family homology region PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Pfam PF02151 UvrB/uvrC motif 210 240 1.2E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 13 477 6.5E-125 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Pfam PF14520 Helix-hairpin-helix domain 595 646 6.2E-9 T 14-10-2018 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 Gene3D G3DSA:3.40.1440.10 7 103 7.8E-30 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PACID_13150 4ad5990d496ae3b53c3b446a36e9bca1 675 SMART SM00465 17 99 4.5E-22 T 14-10-2018 IPR000305 GIY-YIG endonuclease PACID_15820 a5abd7e5bde94ada2c456a699de859c6 253 Pfam PF02498 BRO family, N-terminal domain 14 97 2.9E-25 T 14-10-2018 IPR003497 BRO N-terminal domain PACID_15820 a5abd7e5bde94ada2c456a699de859c6 253 Pfam PF03374 Phage antirepressor protein KilAC domain 131 232 2.6E-20 T 14-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 PACID_15820 a5abd7e5bde94ada2c456a699de859c6 253 SMART SM01040 12 97 1.0E-41 T 14-10-2018 IPR003497 BRO N-terminal domain PACID_06580 eccda98ada68877d8da22c3fd759e846 392 TIGRFAM TIGR02635 RhaI_grampos: L-rhamnose isomerase 13 382 2.2E-179 T 14-10-2018 IPR013457 Rhamnose isomerase-related PACID_06580 eccda98ada68877d8da22c3fd759e846 392 SUPERFAMILY SSF51658 29 363 2.74E-86 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_06580 eccda98ada68877d8da22c3fd759e846 392 Pfam PF06134 L-rhamnose isomerase (RhaA) 84 335 1.0E-5 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 PACID_06580 eccda98ada68877d8da22c3fd759e846 392 Gene3D G3DSA:3.20.20.150 10 384 1.8E-120 T 14-10-2018 PACID_10360 6a03a0d7f6d86e5d21c2d888507ed60c 225 SMART SM00987 53 212 3.0E-30 T 14-10-2018 PACID_10360 6a03a0d7f6d86e5d21c2d888507ed60c 225 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 12 216 1.7E-56 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_10360 6a03a0d7f6d86e5d21c2d888507ed60c 225 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 11 223 33.297 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_10360 6a03a0d7f6d86e5d21c2d888507ed60c 225 SMART SM00986 53 212 3.0E-30 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_10360 6a03a0d7f6d86e5d21c2d888507ed60c 225 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 61 70 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_10360 6a03a0d7f6d86e5d21c2d888507ed60c 225 Gene3D G3DSA:3.40.470.10 1 225 4.4E-84 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_10360 6a03a0d7f6d86e5d21c2d888507ed60c 225 Pfam PF03167 Uracil DNA glycosylase superfamily 58 211 2.6E-19 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_10360 6a03a0d7f6d86e5d21c2d888507ed60c 225 SUPERFAMILY SSF52141 9 224 8.5E-74 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 PACID_03890 3e8a5ebeb1af6813c0bc35c99f8679a1 331 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 326 5.7E-98 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PACID_03890 3e8a5ebeb1af6813c0bc35c99f8679a1 331 Gene3D G3DSA:3.40.50.720 4 268 2.0E-103 T 14-10-2018 PACID_03890 3e8a5ebeb1af6813c0bc35c99f8679a1 331 Gene3D G3DSA:3.90.25.10 188 321 2.0E-103 T 14-10-2018 PACID_03890 3e8a5ebeb1af6813c0bc35c99f8679a1 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 256 1.5E-49 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PACID_03890 3e8a5ebeb1af6813c0bc35c99f8679a1 331 SUPERFAMILY SSF51735 1 326 2.28E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_02570 727bdf4acd7a9f83fd365a05483b11a2 271 SUPERFAMILY SSF53850 51 269 2.1E-51 T 14-10-2018 PACID_02570 727bdf4acd7a9f83fd365a05483b11a2 271 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 57 263 3.3E-39 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 PACID_02570 727bdf4acd7a9f83fd365a05483b11a2 271 Gene3D G3DSA:3.40.190.10 53 267 1.1E-60 T 14-10-2018 PACID_02570 727bdf4acd7a9f83fd365a05483b11a2 271 PIRSF PIRSF004846 11 271 2.7E-60 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 PACID_02570 727bdf4acd7a9f83fd365a05483b11a2 271 Pfam PF13531 Bacterial extracellular solute-binding protein 52 267 1.1E-39 T 14-10-2018 PACID_02570 727bdf4acd7a9f83fd365a05483b11a2 271 Gene3D G3DSA:3.40.190.10 129 230 1.1E-60 T 14-10-2018 PACID_22600 e3f54bb9f3c96890d262b2ba13526b05 236 Gene3D G3DSA:3.40.50.2300 2 223 3.1E-56 T 14-10-2018 PACID_22600 e3f54bb9f3c96890d262b2ba13526b05 236 Gene3D G3DSA:3.40.50.2300 64 228 3.1E-56 T 14-10-2018 PACID_22600 e3f54bb9f3c96890d262b2ba13526b05 236 SUPERFAMILY SSF53822 2 233 2.94E-52 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_22600 e3f54bb9f3c96890d262b2ba13526b05 236 Pfam PF13377 Periplasmic binding protein-like domain 72 231 2.8E-35 T 14-10-2018 PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 Gene3D G3DSA:2.40.40.10 299 391 1.3E-31 T 14-10-2018 IPR036908 RlpA-like domain superfamily PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 6 391 20.032 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 304 388 4.3E-27 T 14-10-2018 IPR012997 Rare lipoprotein A PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 Pfam PF03330 Lytic transglycolase 303 389 5.0E-20 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 Gene3D G3DSA:2.20.230.10 171 276 2.9E-13 T 14-10-2018 PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 Pfam PF07501 G5 domain 201 275 3.5E-14 T 14-10-2018 IPR011098 G5 domain PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 Pfam PF03990 Domain of unknown function (DUF348) 32 71 1.4E-10 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 Pfam PF03990 Domain of unknown function (DUF348) 146 184 9.1E-7 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 SMART SM01208 198 276 1.6E-11 T 14-10-2018 IPR011098 G5 domain PACID_05140 2e1d6c8cb6169b017ffa1f47c2269d72 391 SUPERFAMILY SSF50685 310 387 5.23E-13 T 14-10-2018 IPR036908 RlpA-like domain superfamily PACID_07390 b5ef1bad7093005c45ab19785fd611de 449 Gene3D G3DSA:3.40.190.10 77 405 4.8E-83 T 14-10-2018 PACID_07390 b5ef1bad7093005c45ab19785fd611de 449 Gene3D G3DSA:3.40.190.10 173 434 4.8E-83 T 14-10-2018 PACID_07390 b5ef1bad7093005c45ab19785fd611de 449 Pfam PF01547 Bacterial extracellular solute-binding protein 64 363 2.2E-34 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_07390 b5ef1bad7093005c45ab19785fd611de 449 SUPERFAMILY SSF53850 18 444 9.39E-71 T 14-10-2018 PACID_12280 cac847e648672d2b69c381f788702933 267 SUPERFAMILY SSF46626 16 129 7.65E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PACID_12280 cac847e648672d2b69c381f788702933 267 Pfam PF00034 Cytochrome c 48 124 3.2E-11 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12280 cac847e648672d2b69c381f788702933 267 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 145 218 9.1E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12280 cac847e648672d2b69c381f788702933 267 Gene3D G3DSA:1.10.760.10 10 127 2.6E-19 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PACID_12280 cac847e648672d2b69c381f788702933 267 PIRSF PIRSF000007 1 265 7.3E-96 T 14-10-2018 IPR009152 Cytochrome bc1 complex, cytochrome c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 PACID_12280 cac847e648672d2b69c381f788702933 267 SUPERFAMILY SSF46626 133 220 6.99E-21 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PACID_12280 cac847e648672d2b69c381f788702933 267 Gene3D G3DSA:1.10.760.10 129 225 2.0E-17 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 Gene3D G3DSA:1.10.1060.10 20 136 2.4E-21 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 SUPERFAMILY SSF51971 137 367 1.84E-54 T 14-10-2018 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 SUPERFAMILY SSF46548 47 148 1.05E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 139 414 4.7E-30 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 139 161 1.3E-14 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 396 414 1.3E-14 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 264 288 1.3E-14 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 531 542 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 SUPERFAMILY SSF46548 420 550 1.05E-19 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 Gene3D G3DSA:3.30.70.20 469 565 5.8E-11 T 14-10-2018 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 Pfam PF00037 4Fe-4S binding domain 525 547 1.9E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 Gene3D G3DSA:3.50.50.60 137 256 1.0E-30 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 Gene3D G3DSA:3.50.50.60 264 449 7.8E-24 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 46 126 1.2E-16 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 159 9.4E-18 T 14-10-2018 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 286 9.4E-18 T 14-10-2018 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 358 374 9.4E-18 T 14-10-2018 PACID_05180 c2849d04902753e46b9a9d5cfcff07b4 610 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 386 408 9.4E-18 T 14-10-2018 PACID_27700 12b70b241abc7c86d6b03d707c10aafe 56 SUPERFAMILY SSF57829 4 56 1.83E-17 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 PACID_27700 12b70b241abc7c86d6b03d707c10aafe 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 3.5E-21 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_27700 12b70b241abc7c86d6b03d707c10aafe 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 2 56 14.059 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_27700 12b70b241abc7c86d6b03d707c10aafe 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 24 43 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27700 12b70b241abc7c86d6b03d707c10aafe 56 Pfam PF00471 Ribosomal protein L33 11 56 3.2E-16 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_27700 12b70b241abc7c86d6b03d707c10aafe 56 Gene3D G3DSA:2.20.28.120 1 56 1.0E-23 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 SUPERFAMILY SSF50615 17 93 7.32E-25 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 SUPERFAMILY SSF52540 95 367 4.51E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 SMART SM00382 161 365 2.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 Hamap MF_01347 ATP synthase subunit beta [atpB]. 15 480 54.172 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 20 91 4.6E-21 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 Gene3D G3DSA:1.10.1140.10 365 484 2.4E-48 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 SUPERFAMILY SSF47917 365 481 7.32E-47 T 14-10-2018 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 Gene3D G3DSA:3.40.50.300 94 364 1.2E-101 T 14-10-2018 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 Gene3D G3DSA:2.40.10.170 16 93 9.4E-30 T 14-10-2018 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 17 478 2.7E-234 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 362 2.1E-64 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19350 051aab996c7dca0bc9b8a80cd13737d0 485 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 353 362 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_30110 1e7bdbd568eeac71a9ed3b9238d7f572 447 Gene3D G3DSA:3.90.1150.10 90 439 2.1E-44 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_30110 1e7bdbd568eeac71a9ed3b9238d7f572 447 Pfam PF00155 Aminotransferase class I and II 91 432 4.8E-17 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_30110 1e7bdbd568eeac71a9ed3b9238d7f572 447 SMART SM00345 9 68 1.1E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_30110 1e7bdbd568eeac71a9ed3b9238d7f572 447 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 68 7.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_30110 1e7bdbd568eeac71a9ed3b9238d7f572 447 SUPERFAMILY SSF46785 8 77 5.85E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_30110 1e7bdbd568eeac71a9ed3b9238d7f572 447 Gene3D G3DSA:3.40.640.10 125 338 2.1E-44 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_30110 1e7bdbd568eeac71a9ed3b9238d7f572 447 SUPERFAMILY SSF53383 91 443 1.08E-50 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_30110 1e7bdbd568eeac71a9ed3b9238d7f572 447 Gene3D G3DSA:1.10.10.10 7 75 3.3E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_05410 4b301ad84b011080fa05bc5da05f1159 324 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 313 5.6E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_05410 4b301ad84b011080fa05bc5da05f1159 324 SUPERFAMILY SSF161098 39 320 8.11E-48 T 14-10-2018 IPR035906 MetI-like superfamily PACID_05410 4b301ad84b011080fa05bc5da05f1159 324 Gene3D G3DSA:1.10.3720.10 81 322 3.1E-53 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32520 423ba454d56c6faf8ce017d595e85094 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 236 468 1.3E-54 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 PACID_32520 423ba454d56c6faf8ce017d595e85094 470 SUPERFAMILY SSF56176 17 230 2.24E-60 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PACID_32520 423ba454d56c6faf8ce017d595e85094 470 Pfam PF01565 FAD binding domain 54 192 1.3E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 PACID_32520 423ba454d56c6faf8ce017d595e85094 470 Gene3D G3DSA:3.30.465.40 29 237 2.6E-67 T 14-10-2018 PACID_32520 423ba454d56c6faf8ce017d595e85094 470 Gene3D G3DSA:3.30.70.2740 348 429 4.7E-13 T 14-10-2018 PACID_32520 423ba454d56c6faf8ce017d595e85094 470 Gene3D G3DSA:1.10.45.10 430 469 3.7E-13 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 PACID_32520 423ba454d56c6faf8ce017d595e85094 470 SUPERFAMILY SSF55103 236 469 2.29E-50 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 PACID_19440 32857fb233d411f861f22f411510dc7b 196 SUPERFAMILY SSF51161 56 180 2.08E-35 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_19440 32857fb233d411f861f22f411510dc7b 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 163 1.4E-10 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_19440 32857fb233d411f861f22f411510dc7b 196 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 85 119 5.2E-4 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_19440 32857fb233d411f861f22f411510dc7b 196 Gene3D G3DSA:2.160.10.10 80 191 1.4E-30 T 14-10-2018 PACID_19440 32857fb233d411f861f22f411510dc7b 196 PIRSF PIRSF000441 3 190 2.2E-40 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PACID_27430 78383526dc9e3df29260c5c70c4dce2a 156 Pfam PF14124 Domain of unknown function (DUF4291) 11 72 1.2E-25 T 14-10-2018 IPR025633 Protein of unknown function DUF4291 PACID_16610 b32fafb496f8f980bab2b8c1ff21969f 129 Pfam PF01597 Glycine cleavage H-protein 8 125 1.2E-26 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate PACID_16610 b32fafb496f8f980bab2b8c1ff21969f 129 SUPERFAMILY SSF51230 4 127 1.22E-33 T 14-10-2018 IPR011053 Single hybrid motif PACID_16610 b32fafb496f8f980bab2b8c1ff21969f 129 Gene3D G3DSA:2.40.50.100 1 125 1.6E-36 T 14-10-2018 PACID_30700 6f84489d5df0c403bed7bbcf7b4739b1 441 SUPERFAMILY SSF103473 17 422 1.31E-67 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_30700 6f84489d5df0c403bed7bbcf7b4739b1 441 PRINTS PR01035 Tetracycline resistance protein signature 74 93 2.4E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PACID_30700 6f84489d5df0c403bed7bbcf7b4739b1 441 PRINTS PR01035 Tetracycline resistance protein signature 44 60 2.4E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PACID_30700 6f84489d5df0c403bed7bbcf7b4739b1 441 PRINTS PR01035 Tetracycline resistance protein signature 157 179 2.4E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PACID_30700 6f84489d5df0c403bed7bbcf7b4739b1 441 PRINTS PR01035 Tetracycline resistance protein signature 404 423 2.4E-11 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PACID_30700 6f84489d5df0c403bed7bbcf7b4739b1 441 Gene3D G3DSA:1.20.1250.20 25 231 1.7E-34 T 14-10-2018 PACID_30700 6f84489d5df0c403bed7bbcf7b4739b1 441 Gene3D G3DSA:1.20.1250.20 232 430 3.6E-20 T 14-10-2018 PACID_30700 6f84489d5df0c403bed7bbcf7b4739b1 441 Pfam PF07690 Major Facilitator Superfamily 36 381 9.0E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 Gene3D G3DSA:1.10.3210.10 284 449 2.3E-16 T 14-10-2018 PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 SUPERFAMILY SSF54791 192 266 1.46E-13 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 Hamap MF_00335 Ribonuclease Y [rny]. 19 499 21.773 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 Pfam PF12072 Domain of unknown function (DUF3552) 50 183 2.7E-14 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 Pfam PF00013 KH domain 193 245 4.1E-6 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 Pfam PF01966 HD domain 316 407 1.8E-17 T 14-10-2018 IPR006674 HD domain PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 SMART SM00471 311 417 1.5E-8 T 14-10-2018 IPR003607 HD/PDEase domain PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 SUPERFAMILY SSF109604 289 427 2.01E-24 T 14-10-2018 PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 TIGRFAM TIGR00277 HDIG: HDIG domain 311 388 6.2E-23 T 14-10-2018 IPR006675 HDIG domain PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 Gene3D G3DSA:3.30.1370.10 187 283 2.1E-7 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 46 497 1.1E-163 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 PACID_15270 8d5a12c0cd323a0730a7aae118d18496 502 SMART SM00322 187 254 1.2E-5 T 14-10-2018 IPR004087 K Homology domain GO:0003676 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 159 170 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 Gene3D G3DSA:3.30.70.890 245 399 1.5E-121 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 Pfam PF00288 GHMP kinases N terminal domain 155 222 2.1E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 Gene3D G3DSA:3.30.230.10 60 244 1.5E-121 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 SUPERFAMILY SSF55060 250 419 6.78E-48 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PRINTS PR00959 Mevalonate kinase family signature 205 224 1.2E-36 T 14-10-2018 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PRINTS PR00959 Mevalonate kinase family signature 157 179 1.2E-36 T 14-10-2018 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PRINTS PR00959 Mevalonate kinase family signature 63 87 1.2E-36 T 14-10-2018 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PRINTS PR00959 Mevalonate kinase family signature 371 388 1.2E-36 T 14-10-2018 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PRINTS PR00473 Galactokinase signature 308 322 7.6E-19 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PRINTS PR00473 Galactokinase signature 130 141 7.6E-19 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PRINTS PR00473 Galactokinase signature 150 168 7.6E-19 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PRINTS PR00473 Galactokinase signature 65 83 7.6E-19 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 Pfam PF08544 GHMP kinases C terminal 326 403 5.8E-13 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 ProSitePatterns PS00106 Galactokinase signature. 65 76 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 PIRSF PIRSF000530 30 424 4.2E-115 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 SUPERFAMILY SSF54211 38 245 7.36E-52 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 Pfam PF10509 Galactokinase galactose-binding signature 48 95 7.0E-21 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_30820 9dd5a70c95c3034a98b366295dbc1eef 426 TIGRFAM TIGR00131 gal_kin: galactokinase 44 415 1.7E-76 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 PACID_21450 6b412dc49b054de0238d786745852070 389 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 361 374 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21450 6b412dc49b054de0238d786745852070 389 Pfam PF00448 SRP54-type protein, GTPase domain 189 387 1.3E-74 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21450 6b412dc49b054de0238d786745852070 389 SMART SM00382 188 338 9.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_21450 6b412dc49b054de0238d786745852070 389 Pfam PF02881 SRP54-type protein, helical bundle domain 106 168 3.6E-8 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21450 6b412dc49b054de0238d786745852070 389 Gene3D G3DSA:1.20.120.140 90 386 7.3E-99 T 14-10-2018 PACID_21450 6b412dc49b054de0238d786745852070 389 SUPERFAMILY SSF47364 87 164 1.02E-15 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 PACID_21450 6b412dc49b054de0238d786745852070 389 SMART SM00962 189 388 9.9E-108 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21450 6b412dc49b054de0238d786745852070 389 SUPERFAMILY SSF52540 186 387 7.3E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_21450 6b412dc49b054de0238d786745852070 389 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 115 388 58.443 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PACID_21450 6b412dc49b054de0238d786745852070 389 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 116 386 1.2E-101 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 PACID_21450 6b412dc49b054de0238d786745852070 389 SMART SM00963 92 172 4.9E-15 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21450 6b412dc49b054de0238d786745852070 389 Gene3D G3DSA:3.40.50.300 189 376 7.3E-99 T 14-10-2018 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 30 96 2.7E-15 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 Gene3D G3DSA:3.40.50.300 98 384 7.3E-116 T 14-10-2018 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 Gene3D G3DSA:1.20.150.20 385 517 6.5E-45 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 SUPERFAMILY SSF47917 386 512 3.66E-43 T 14-10-2018 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 SUPERFAMILY SSF52540 100 383 8.11E-94 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 6 512 8.6E-234 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 SUPERFAMILY SSF50615 26 98 1.59E-22 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 368 377 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 384 507 7.1E-44 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 154 377 2.1E-67 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 Gene3D G3DSA:2.40.30.20 4 97 1.9E-28 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_19370 b063a6351d7bf61c2b37c65df8d9d736 545 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 4 513 48.168 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_14160 7f6a2f92ac540505a3daeda458d52a30 411 Gene3D G3DSA:2.160.10.10 7 238 3.6E-22 T 14-10-2018 PACID_14160 7f6a2f92ac540505a3daeda458d52a30 411 SUPERFAMILY SSF51161 94 229 3.66E-5 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_14160 7f6a2f92ac540505a3daeda458d52a30 411 SUPERFAMILY SSF51161 33 230 7.49E-11 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_20110 89baf5dc4c2d25f424d8ed3a451b8e32 301 Pfam PF13672 Protein phosphatase 2C 41 243 2.3E-15 T 14-10-2018 PACID_20110 89baf5dc4c2d25f424d8ed3a451b8e32 301 SMART SM00332 24 280 6.3E-7 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PACID_20110 89baf5dc4c2d25f424d8ed3a451b8e32 301 SUPERFAMILY SSF81606 27 279 4.05E-36 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PACID_20110 89baf5dc4c2d25f424d8ed3a451b8e32 301 Gene3D G3DSA:3.60.40.10 13 284 1.7E-45 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PACID_20110 89baf5dc4c2d25f424d8ed3a451b8e32 301 SMART SM00331 32 282 0.0046 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 PACID_31840 7d59ae251c0935d2a4677d5dcabd4e8c 819 SUPERFAMILY SSF51445 206 529 4.21E-49 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31840 7d59ae251c0935d2a4677d5dcabd4e8c 819 Gene3D G3DSA:3.20.20.80 203 560 2.9E-82 T 14-10-2018 PACID_31840 7d59ae251c0935d2a4677d5dcabd4e8c 819 Pfam PF01055 Glycosyl hydrolases family 31 198 616 2.7E-86 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 PACID_31840 7d59ae251c0935d2a4677d5dcabd4e8c 819 SUPERFAMILY SSF51011 534 614 1.15E-11 T 14-10-2018 PACID_31840 7d59ae251c0935d2a4677d5dcabd4e8c 819 Gene3D G3DSA:2.60.40.1180 568 615 1.6E-9 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_00430 c1ce311308bcf740b9cf8af8d5550df0 565 SMART SM00507 391 443 2.6E-9 T 14-10-2018 IPR003615 HNH nuclease PACID_00430 c1ce311308bcf740b9cf8af8d5550df0 565 Pfam PF01844 HNH endonuclease 413 440 6.6E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PACID_00430 c1ce311308bcf740b9cf8af8d5550df0 565 Pfam PF02720 Domain of unknown function (DUF222) 38 400 2.2E-22 T 14-10-2018 IPR003870 Domain of unknown function DUF222 PACID_20590 fef82bd347300767e61f3d11343e0a38 363 Gene3D G3DSA:3.20.10.10 177 345 3.8E-122 T 14-10-2018 PACID_20590 fef82bd347300767e61f3d11343e0a38 363 SUPERFAMILY SSF56752 13 359 8.24E-100 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PACID_20590 fef82bd347300767e61f3d11343e0a38 363 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 47 362 5.2E-119 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 PACID_20590 fef82bd347300767e61f3d11343e0a38 363 PIRSF PIRSF006468 4 363 6.4E-125 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 PACID_20590 fef82bd347300767e61f3d11343e0a38 363 Gene3D G3DSA:3.30.470.10 28 358 3.8E-122 T 14-10-2018 PACID_20590 fef82bd347300767e61f3d11343e0a38 363 Pfam PF01063 Amino-transferase class IV 73 319 3.8E-31 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PACID_26890 8e54c86c43cf8c9b3f8b8927cc530484 436 SUPERFAMILY SSF52777 26 213 2.82E-19 T 14-10-2018 PACID_26890 8e54c86c43cf8c9b3f8b8927cc530484 436 Gene3D G3DSA:3.30.559.30 201 425 4.6E-18 T 14-10-2018 PACID_26890 8e54c86c43cf8c9b3f8b8927cc530484 436 SUPERFAMILY SSF52777 209 428 9.64E-12 T 14-10-2018 PACID_26890 8e54c86c43cf8c9b3f8b8927cc530484 436 Pfam PF00668 Condensation domain 49 306 8.4E-9 T 14-10-2018 IPR001242 Condensation domain PACID_26890 8e54c86c43cf8c9b3f8b8927cc530484 436 Gene3D G3DSA:3.30.559.10 49 379 4.6E-18 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 Pfam PF07650 KH domain 37 109 2.4E-18 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 Gene3D G3DSA:3.30.300.20 17 106 1.1E-26 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.814 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 Gene3D G3DSA:3.30.1140.32 107 207 2.1E-40 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 4.2E-91 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 SMART SM00322 59 124 8.9E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 3.9E-38 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 SUPERFAMILY SSF54814 2 105 4.71E-34 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PACID_25700 e03134b236bf751b2a9ae71a3066e83d 272 SUPERFAMILY SSF54821 106 205 2.49E-38 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_10120 0559063b96e97b75ad21929629f89008 231 SUPERFAMILY SSF55811 81 226 1.9E-22 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_10120 0559063b96e97b75ad21929629f89008 231 ProSitePatterns PS00893 Nudix box signature. 122 143 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PACID_10120 0559063b96e97b75ad21929629f89008 231 PRINTS PR00502 NUDIX hydrolase family signature 117 131 8.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PACID_10120 0559063b96e97b75ad21929629f89008 231 PRINTS PR00502 NUDIX hydrolase family signature 131 146 8.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 PACID_10120 0559063b96e97b75ad21929629f89008 231 Gene3D G3DSA:3.90.79.10 86 225 6.3E-21 T 14-10-2018 PACID_10120 0559063b96e97b75ad21929629f89008 231 Pfam PF00293 NUDIX domain 89 206 4.7E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_25590 c0a0c0a79ecd69fda1a99d9e0026f804 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.8E-56 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 PACID_25590 c0a0c0a79ecd69fda1a99d9e0026f804 122 SUPERFAMILY SSF50193 1 122 9.03E-51 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25590 c0a0c0a79ecd69fda1a99d9e0026f804 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25590 c0a0c0a79ecd69fda1a99d9e0026f804 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 2.4E-55 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PACID_25590 c0a0c0a79ecd69fda1a99d9e0026f804 122 SMART SM01374 1 122 8.9E-88 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PACID_25590 c0a0c0a79ecd69fda1a99d9e0026f804 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.837 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 PACID_25590 c0a0c0a79ecd69fda1a99d9e0026f804 122 Gene3D G3DSA:2.40.150.20 1 122 1.3E-52 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_31760 b75f515710a42815c93cba52a0df65a0 436 Gene3D G3DSA:3.40.190.10 159 428 5.1E-86 T 14-10-2018 PACID_31760 b75f515710a42815c93cba52a0df65a0 436 SUPERFAMILY SSF53850 54 431 2.23E-70 T 14-10-2018 PACID_31760 b75f515710a42815c93cba52a0df65a0 436 Pfam PF13416 Bacterial extracellular solute-binding protein 104 376 2.3E-32 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_31760 b75f515710a42815c93cba52a0df65a0 436 Gene3D G3DSA:3.40.190.10 66 389 5.1E-86 T 14-10-2018 PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 Gene3D G3DSA:3.40.50.300 319 587 1.5E-70 T 14-10-2018 PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 PIRSF PIRSF001327 1 588 6.8E-251 T 14-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 Gene3D G3DSA:3.40.50.300 5 296 1.4E-84 T 14-10-2018 PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 SUPERFAMILY SSF52540 331 554 2.67E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 Pfam PF02374 Anion-transporting ATPase 490 587 4.6E-7 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 Pfam PF02374 Anion-transporting ATPase 14 293 6.8E-78 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 Pfam PF02374 Anion-transporting ATPase 334 470 2.1E-33 T 14-10-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 SMART SM00382 330 526 0.59 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 SMART SM00382 10 231 0.77 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 SUPERFAMILY SSF52540 9 261 7.34E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 10 575 5.2E-245 T 14-10-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 PACID_04000 2ea073e3a9f58cd62fd399a46ec3a8af 588 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 15 293 3.2E-80 T 14-10-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 PACID_03790 eec49ddbec047a76dcd94c353107ce74 101 Pfam PF01402 Ribbon-helix-helix protein, copG family 66 99 1.3E-5 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_30360 3ef6dca11782f3ca95cc2f3b7c178ca5 548 Gene3D G3DSA:3.30.1380.10 400 546 1.9E-10 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PACID_30360 3ef6dca11782f3ca95cc2f3b7c178ca5 548 SUPERFAMILY SSF55166 440 547 1.18E-13 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 PACID_30360 3ef6dca11782f3ca95cc2f3b7c178ca5 548 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 459 547 2.2E-14 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 PACID_30360 3ef6dca11782f3ca95cc2f3b7c178ca5 548 Pfam PF08310 LGFP repeat 115 159 5.8E-6 T 14-10-2018 IPR013207 LGFP PACID_30360 3ef6dca11782f3ca95cc2f3b7c178ca5 548 Pfam PF08310 LGFP repeat 216 266 8.0E-9 T 14-10-2018 IPR013207 LGFP PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 177 225 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 SUPERFAMILY SSF81464 8 108 7.36E-19 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 24 103 5.1E-5 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 Gene3D G3DSA:2.60.40.420 109 272 7.4E-48 T 14-10-2018 IPR008972 Cupredoxin PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 121 231 1.0E-19 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 PRINTS PR01166 Cytochrome c oxidase subunit II signature 196 213 1.4E-15 T 14-10-2018 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 PRINTS PR01166 Cytochrome c oxidase subunit II signature 116 135 1.4E-15 T 14-10-2018 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 PRINTS PR01166 Cytochrome c oxidase subunit II signature 152 173 1.4E-15 T 14-10-2018 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 PRINTS PR01166 Cytochrome c oxidase subunit II signature 214 231 1.4E-15 T 14-10-2018 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 PRINTS PR01166 Cytochrome c oxidase subunit II signature 81 93 1.4E-15 T 14-10-2018 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 PRINTS PR01166 Cytochrome c oxidase subunit II signature 176 196 1.4E-15 T 14-10-2018 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 Gene3D G3DSA:1.10.287.90 21 108 6.2E-17 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 37 241 2.1E-51 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12210 84058c39a2b3e0747981d1b9ec1c71c4 275 SUPERFAMILY SSF49503 114 250 1.05E-44 T 14-10-2018 IPR008972 Cupredoxin PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 421 27.778 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 ProSitePatterns PS00885 EPSP synthase signature 2. 331 349 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 14 413 2.2E-100 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 Gene3D G3DSA:3.65.10.10 20 236 4.9E-127 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 PIRSF PIRSF000505 6 422 1.8E-106 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 16 418 6.8E-103 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 SUPERFAMILY SSF55205 9 418 1.06E-97 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 ProSitePatterns PS00104 EPSP synthase signature 1. 85 99 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 PACID_19850 8da70382c4f5da4a95c04a6f3ed96ca4 422 Gene3D G3DSA:3.65.10.10 16 411 4.9E-127 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 PACID_02910 da2e294059078a7c420ed59318c9820c 340 Pfam PF13377 Periplasmic binding protein-like domain 168 334 3.6E-38 T 14-10-2018 PACID_02910 da2e294059078a7c420ed59318c9820c 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 1.2E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_02910 da2e294059078a7c420ed59318c9820c 340 SUPERFAMILY SSF47413 3 60 8.09E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_02910 da2e294059078a7c420ed59318c9820c 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 PACID_02910 da2e294059078a7c420ed59318c9820c 340 SMART SM00354 2 72 1.3E-32 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_02910 da2e294059078a7c420ed59318c9820c 340 Gene3D G3DSA:1.10.260.40 1 56 1.4E-24 T 14-10-2018 PACID_02910 da2e294059078a7c420ed59318c9820c 340 SUPERFAMILY SSF53822 63 335 1.29E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_02910 da2e294059078a7c420ed59318c9820c 340 Gene3D G3DSA:3.40.50.2300 160 290 6.0E-80 T 14-10-2018 PACID_02910 da2e294059078a7c420ed59318c9820c 340 Gene3D G3DSA:3.40.50.2300 57 307 6.0E-80 T 14-10-2018 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 Pfam PF01266 FAD dependent oxidoreductase 7 356 1.3E-41 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 Gene3D G3DSA:1.10.10.1100 413 488 5.2E-15 T 14-10-2018 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 SUPERFAMILY SSF51905 6 373 5.65E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 Gene3D G3DSA:3.30.9.10 83 314 1.5E-71 T 14-10-2018 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 Pfam PF04324 BFD-like [2Fe-2S] binding domain 427 474 4.0E-6 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 350 360 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 SUPERFAMILY SSF54373 224 314 1.26E-8 T 14-10-2018 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 Gene3D G3DSA:3.50.50.60 7 364 1.5E-71 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 19 29 5.9E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 307 313 5.9E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 345 357 5.9E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 6 18 5.9E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 47 5.9E-19 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 PACID_32710 eceeab08b37310a65dfd7b7f770f8ae5 541 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 7 533 3.5E-217 T 14-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 Gene3D G3DSA:3.90.199.10 38 491 1.5E-188 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 SUPERFAMILY SSF101904 508 767 9.68E-34 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 730 749 0.55 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 665 696 0.0012 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 SMART SM00434 17 470 1.2E-242 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 SUPERFAMILY SSF56719 37 492 1.19E-161 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 Gene3D G3DSA:1.10.268.10 375 463 1.5E-188 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 38 477 8.7E-145 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 Gene3D G3DSA:2.120.10.90 499 768 1.3E-35 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal PACID_16150 8bd6df90e69ec954b66f66faac56694f 840 Gene3D G3DSA:3.30.1360.40 241 338 1.5E-188 T 14-10-2018 PACID_04540 8c5992f396bfdeafddc27ac5abbe57b5 427 SUPERFAMILY SSF63411 239 419 2.17E-24 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PACID_04540 8c5992f396bfdeafddc27ac5abbe57b5 427 Pfam PF00675 Insulinase (Peptidase family M16) 17 133 4.0E-19 T 14-10-2018 IPR011765 Peptidase M16, N-terminal PACID_04540 8c5992f396bfdeafddc27ac5abbe57b5 427 Gene3D G3DSA:3.30.830.10 3 224 1.4E-65 T 14-10-2018 PACID_04540 8c5992f396bfdeafddc27ac5abbe57b5 427 Pfam PF05193 Peptidase M16 inactive domain 175 351 5.8E-24 T 14-10-2018 IPR007863 Peptidase M16, C-terminal PACID_04540 8c5992f396bfdeafddc27ac5abbe57b5 427 SUPERFAMILY SSF63411 3 222 5.59E-56 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PACID_04540 8c5992f396bfdeafddc27ac5abbe57b5 427 Gene3D G3DSA:3.30.830.10 235 419 2.8E-32 T 14-10-2018 PACID_29060 8a396380f887c9615a897376f28d3935 432 Pfam PF00437 Type II/IV secretion system protein 58 331 3.7E-66 T 14-10-2018 IPR001482 Type II/IV secretion system protein PACID_29060 8a396380f887c9615a897376f28d3935 432 TIGRFAM TIGR03819 heli_sec_ATPase: helicase/secretion neighborhood ATPase 5 342 2.7E-143 T 14-10-2018 IPR022399 Helicase/secretion neighbourhood ATPase PACID_29060 8a396380f887c9615a897376f28d3935 432 SUPERFAMILY SSF52540 41 332 2.99E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_29060 8a396380f887c9615a897376f28d3935 432 Gene3D G3DSA:3.30.450.90 52 154 2.5E-21 T 14-10-2018 PACID_29060 8a396380f887c9615a897376f28d3935 432 Gene3D G3DSA:3.40.50.300 155 380 3.7E-53 T 14-10-2018 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 5.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 5.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 Gene3D G3DSA:1.10.357.10 67 191 9.1E-24 T 14-10-2018 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 PRINTS PR00400 Tetracycline repressor protein signature 134 153 8.8E-9 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 PRINTS PR00400 Tetracycline repressor protein signature 20 43 8.8E-9 T 14-10-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 SUPERFAMILY SSF46689 2 61 1.49E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 SUPERFAMILY SSF48498 72 192 1.89E-24 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 Gene3D G3DSA:1.10.10.60 1 62 5.4E-24 T 14-10-2018 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 80 159 4.8E-11 T 14-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 PACID_10250 f7038a3e85a933544d5454c0545e47b3 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 52 3.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_23160 8f6aad224eb8e07ecd1031c4ccd974f2 397 Pfam PF07690 Major Facilitator Superfamily 13 226 5.6E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_23160 8f6aad224eb8e07ecd1031c4ccd974f2 397 Gene3D G3DSA:1.20.1250.20 2 379 2.1E-52 T 14-10-2018 PACID_23160 8f6aad224eb8e07ecd1031c4ccd974f2 397 SUPERFAMILY SSF103473 5 385 1.09E-52 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_23160 8f6aad224eb8e07ecd1031c4ccd974f2 397 PRINTS PR01035 Tetracycline resistance protein signature 130 152 2.7E-12 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PACID_23160 8f6aad224eb8e07ecd1031c4ccd974f2 397 PRINTS PR01035 Tetracycline resistance protein signature 17 33 2.7E-12 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PACID_23160 8f6aad224eb8e07ecd1031c4ccd974f2 397 PRINTS PR01035 Tetracycline resistance protein signature 158 178 2.7E-12 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 PACID_29730 269b5c82ead7af3c80b86f02c2f76701 182 Gene3D G3DSA:1.10.10.10 19 101 1.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_29730 269b5c82ead7af3c80b86f02c2f76701 182 Pfam PF01475 Ferric uptake regulator family 29 121 2.3E-16 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 PACID_29730 269b5c82ead7af3c80b86f02c2f76701 182 Gene3D G3DSA:3.30.1490.190 103 164 2.6E-9 T 14-10-2018 PACID_29730 269b5c82ead7af3c80b86f02c2f76701 182 SUPERFAMILY SSF46785 23 152 2.61E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 ProSitePatterns PS00211 ABC transporters family signature. 837 851 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 Gene3D G3DSA:3.40.50.300 624 943 3.6E-146 T 14-10-2018 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 Gene3D G3DSA:1.20.1580.10 699 837 3.6E-146 T 14-10-2018 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 Gene3D G3DSA:1.10.8.280 295 412 1.1E-252 T 14-10-2018 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 Gene3D G3DSA:3.40.50.300 9 604 1.1E-252 T 14-10-2018 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 7 932 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 Pfam PF00005 ABC transporter 631 867 2.2E-10 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 Gene3D G3DSA:3.30.190.20 134 243 1.1E-252 T 14-10-2018 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 Gene3D G3DSA:1.20.1580.10 94 501 1.1E-252 T 14-10-2018 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 Hamap MF_00205 UvrABC system protein A [uvrA]. 5 947 22.703 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 SMART SM00382 640 929 0.0068 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 SUPERFAMILY SSF52540 13 578 3.02E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13110 aa5a06f39ebeb5021f004a5d1ebad4c2 999 SUPERFAMILY SSF52540 624 921 1.66E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25290 e3b0d8a00b135d688d1d0b4b53ff77a4 229 Pfam PF00117 Glutamine amidotransferase class-I 70 179 9.1E-12 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_25290 e3b0d8a00b135d688d1d0b4b53ff77a4 229 Gene3D G3DSA:3.40.50.880 1 228 1.9E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_25290 e3b0d8a00b135d688d1d0b4b53ff77a4 229 SUPERFAMILY SSF52317 15 226 1.83E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_25290 e3b0d8a00b135d688d1d0b4b53ff77a4 229 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 2.6E-5 T 14-10-2018 PACID_25290 e3b0d8a00b135d688d1d0b4b53ff77a4 229 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 83 99 2.6E-5 T 14-10-2018 PACID_17930 6b2eb1eb36eee553b43e32901ea5f4f8 237 SUPERFAMILY SSF56281 14 229 6.77E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_17930 6b2eb1eb36eee553b43e32901ea5f4f8 237 SMART SM00849 19 211 3.9E-30 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_17930 6b2eb1eb36eee553b43e32901ea5f4f8 237 Gene3D G3DSA:3.60.15.10 8 233 2.5E-54 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_17930 6b2eb1eb36eee553b43e32901ea5f4f8 237 Pfam PF00753 Metallo-beta-lactamase superfamily 16 211 1.7E-22 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_18340 b86f050beea942d078471425e988fef2 481 SUPERFAMILY SSF55681 23 390 8.12E-122 T 14-10-2018 PACID_18340 b86f050beea942d078471425e988fef2 481 Pfam PF03129 Anticodon binding domain 387 474 5.6E-24 T 14-10-2018 IPR004154 Anticodon-binding PACID_18340 b86f050beea942d078471425e988fef2 481 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 26 250 1.7E-80 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_18340 b86f050beea942d078471425e988fef2 481 PRINTS PR01043 Glycyl-tRNA synthetase signature 44 58 4.7E-54 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_18340 b86f050beea942d078471425e988fef2 481 PRINTS PR01043 Glycyl-tRNA synthetase signature 158 170 4.7E-54 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_18340 b86f050beea942d078471425e988fef2 481 PRINTS PR01043 Glycyl-tRNA synthetase signature 211 228 4.7E-54 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_18340 b86f050beea942d078471425e988fef2 481 PRINTS PR01043 Glycyl-tRNA synthetase signature 179 196 4.7E-54 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_18340 b86f050beea942d078471425e988fef2 481 PRINTS PR01043 Glycyl-tRNA synthetase signature 338 350 4.7E-54 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_18340 b86f050beea942d078471425e988fef2 481 PRINTS PR01043 Glycyl-tRNA synthetase signature 424 443 4.7E-54 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_18340 b86f050beea942d078471425e988fef2 481 PRINTS PR01043 Glycyl-tRNA synthetase signature 228 238 4.7E-54 T 14-10-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_18340 b86f050beea942d078471425e988fef2 481 SUPERFAMILY SSF52954 374 477 1.21E-33 T 14-10-2018 PACID_18340 b86f050beea942d078471425e988fef2 481 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 22 479 49.647 T 14-10-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 PACID_18340 b86f050beea942d078471425e988fef2 481 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 178 353 3.4E-9 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_18340 b86f050beea942d078471425e988fef2 481 Gene3D G3DSA:3.40.50.800 385 479 1.5E-32 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily PACID_06370 d9191e890bba987fa9605050c96b47ea 408 SMART SM01110 62 330 9.3E-22 T 14-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 PACID_06370 d9191e890bba987fa9605050c96b47ea 408 Gene3D G3DSA:3.40.50.1820 63 353 1.5E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_06370 d9191e890bba987fa9605050c96b47ea 408 SUPERFAMILY SSF53474 61 295 7.35E-20 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_06370 d9191e890bba987fa9605050c96b47ea 408 Pfam PF01083 Cutinase 63 294 6.6E-16 T 14-10-2018 IPR000675 Cutinase/acetylxylan esterase GO:0016787 PACID_17060 3cae2fad22359fe716feec67f1c62ce5 133 SUPERFAMILY SSF54593 8 133 3.36E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_17060 3cae2fad22359fe716feec67f1c62ce5 133 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 130 3.4E-14 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain PACID_17060 3cae2fad22359fe716feec67f1c62ce5 133 Gene3D G3DSA:3.10.180.10 3 133 6.2E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_24440 945517ad27def408fb0cc83d98b61388 596 Gene3D G3DSA:3.40.50.620 6 395 7.6E-143 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_24440 945517ad27def408fb0cc83d98b61388 596 Pfam PF09334 tRNA synthetases class I (M) 6 412 1.3E-141 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_24440 945517ad27def408fb0cc83d98b61388 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.7E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PACID_24440 945517ad27def408fb0cc83d98b61388 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 253 264 1.7E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PACID_24440 945517ad27def408fb0cc83d98b61388 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.7E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PACID_24440 945517ad27def408fb0cc83d98b61388 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 293 308 1.7E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PACID_24440 945517ad27def408fb0cc83d98b61388 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 400 411 1.7E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PACID_24440 945517ad27def408fb0cc83d98b61388 596 PRINTS PR01041 Methionyl-tRNA synthetase signature 7 20 1.7E-22 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PACID_24440 945517ad27def408fb0cc83d98b61388 596 SUPERFAMILY SSF47323 405 586 1.7E-35 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_24440 945517ad27def408fb0cc83d98b61388 596 Pfam PF08264 Anticodon-binding domain of tRNA 433 525 1.8E-9 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 PACID_24440 945517ad27def408fb0cc83d98b61388 596 SUPERFAMILY SSF57770 140 174 1.44E-12 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_24440 945517ad27def408fb0cc83d98b61388 596 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 527 8.5E-146 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 PACID_24440 945517ad27def408fb0cc83d98b61388 596 SUPERFAMILY SSF52374 6 400 1.09E-89 T 14-10-2018 PACID_24440 945517ad27def408fb0cc83d98b61388 596 Gene3D G3DSA:1.10.730.10 396 587 1.2E-40 T 14-10-2018 PACID_24440 945517ad27def408fb0cc83d98b61388 596 Gene3D G3DSA:2.20.28.20 140 174 7.6E-143 T 14-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_24440 945517ad27def408fb0cc83d98b61388 596 Hamap MF_00098 Methionine--tRNA ligase [metG]. 3 590 38.131 T 14-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 PACID_20270 fcd40aa3623ca97f606979407cec1b6a 240 SMART SM00862 156 232 6.9E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_20270 fcd40aa3623ca97f606979407cec1b6a 240 Pfam PF00072 Response regulator receiver domain 13 122 3.0E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_20270 fcd40aa3623ca97f606979407cec1b6a 240 SUPERFAMILY SSF46894 133 231 8.5E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_20270 fcd40aa3623ca97f606979407cec1b6a 240 Gene3D G3DSA:3.40.50.2300 3 133 4.0E-39 T 14-10-2018 PACID_20270 fcd40aa3623ca97f606979407cec1b6a 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 2.8E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_20270 fcd40aa3623ca97f606979407cec1b6a 240 SMART SM00448 11 121 6.9E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_20270 fcd40aa3623ca97f606979407cec1b6a 240 Gene3D G3DSA:1.10.10.10 134 239 1.6E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_20270 fcd40aa3623ca97f606979407cec1b6a 240 SUPERFAMILY SSF52172 7 128 2.42E-42 T 14-10-2018 IPR011006 CheY-like superfamily PACID_09360 718c431b5c4e84703cdd7a1c0128ec03 399 Gene3D G3DSA:3.40.50.720 5 135 5.2E-33 T 14-10-2018 PACID_09360 718c431b5c4e84703cdd7a1c0128ec03 399 SUPERFAMILY SSF55347 140 320 3.43E-34 T 14-10-2018 PACID_09360 718c431b5c4e84703cdd7a1c0128ec03 399 Gene3D G3DSA:3.30.360.10 136 388 5.2E-60 T 14-10-2018 PACID_09360 718c431b5c4e84703cdd7a1c0128ec03 399 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 146 217 1.2E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_09360 718c431b5c4e84703cdd7a1c0128ec03 399 SUPERFAMILY SSF51735 4 164 7.89E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_09360 718c431b5c4e84703cdd7a1c0128ec03 399 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 8 134 1.3E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_01990 e7fceeb1bdfae1e1e2cb36daddea1253 318 SUPERFAMILY SSF52283 54 142 1.57E-21 T 14-10-2018 PACID_01990 e7fceeb1bdfae1e1e2cb36daddea1253 318 Gene3D G3DSA:3.40.50.720 108 292 2.3E-74 T 14-10-2018 PACID_01990 e7fceeb1bdfae1e1e2cb36daddea1253 318 SUPERFAMILY SSF51735 111 295 1.72E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_01990 e7fceeb1bdfae1e1e2cb36daddea1253 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 52 316 1.7E-19 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PACID_01990 e7fceeb1bdfae1e1e2cb36daddea1253 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 3.6E-45 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PACID_01990 e7fceeb1bdfae1e1e2cb36daddea1253 318 Gene3D G3DSA:3.40.50.720 52 315 2.3E-74 T 14-10-2018 PACID_11850 05c256af19cdef325aaff83f1ed865ac 443 SUPERFAMILY SSF53383 36 441 1.9E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_11850 05c256af19cdef325aaff83f1ed865ac 443 Gene3D G3DSA:3.40.640.10 78 341 2.2E-156 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_11850 05c256af19cdef325aaff83f1ed865ac 443 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 29 441 3.1E-158 T 14-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 PACID_11850 05c256af19cdef325aaff83f1ed865ac 443 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 258 295 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_11850 05c256af19cdef325aaff83f1ed865ac 443 Pfam PF00202 Aminotransferase class-III 43 441 2.9E-115 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_11850 05c256af19cdef325aaff83f1ed865ac 443 PIRSF PIRSF000521 2 153 1.8E-9 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_11850 05c256af19cdef325aaff83f1ed865ac 443 PIRSF PIRSF000521 144 443 4.0E-29 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_11850 05c256af19cdef325aaff83f1ed865ac 443 Gene3D G3DSA:3.90.1150.10 20 436 2.2E-156 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 152 418 1.6E-101 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 Pfam PF03952 Enolase, N-terminal domain 12 142 9.3E-46 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 12 419 6.7E-161 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 Hamap MF_00318 Enolase [eno]. 10 421 39.095 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 ProSitePatterns PS00164 Enolase signature. 344 357 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 SUPERFAMILY SSF51604 150 420 7.5E-105 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PACID_01050 a86427b937327e8f7cedc01dcd713598 429 SMART SM01192 149 423 3.8E-162 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 SMART SM01193 12 142 2.6E-65 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 PIRSF PIRSF001400 8 426 1.7E-159 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 Gene3D G3DSA:3.20.20.120 137 424 1.4E-111 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PACID_01050 a86427b937327e8f7cedc01dcd713598 429 PRINTS PR00148 Enolase signature 344 358 5.8E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 PRINTS PR00148 Enolase signature 321 332 5.8E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 PRINTS PR00148 Enolase signature 373 390 5.8E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 PRINTS PR00148 Enolase signature 115 131 5.8E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 PRINTS PR00148 Enolase signature 171 184 5.8E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 PRINTS PR00148 Enolase signature 45 59 5.8E-42 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_01050 a86427b937327e8f7cedc01dcd713598 429 Gene3D G3DSA:3.30.390.10 9 135 1.4E-45 T 14-10-2018 IPR029017 Enolase-like, N-terminal PACID_01050 a86427b937327e8f7cedc01dcd713598 429 SUPERFAMILY SSF54826 12 143 3.31E-42 T 14-10-2018 PACID_00330 e146433f3760acf13cb90fc3f42f7f09 432 SUPERFAMILY SSF103473 35 417 1.31E-46 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_00330 e146433f3760acf13cb90fc3f42f7f09 432 Gene3D G3DSA:1.20.1250.20 232 424 1.6E-28 T 14-10-2018 PACID_00330 e146433f3760acf13cb90fc3f42f7f09 432 Pfam PF07690 Major Facilitator Superfamily 39 228 7.1E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_00330 e146433f3760acf13cb90fc3f42f7f09 432 Pfam PF07690 Major Facilitator Superfamily 246 415 1.8E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_00330 e146433f3760acf13cb90fc3f42f7f09 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 293 309 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_00330 e146433f3760acf13cb90fc3f42f7f09 432 Gene3D G3DSA:1.20.1250.20 31 216 3.2E-14 T 14-10-2018 PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 80 1.9E-24 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 Gene3D G3DSA:3.30.1340.10 2 83 4.4E-25 T 14-10-2018 IPR035895 HPr-like superfamily PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 SUPERFAMILY SSF55594 1 84 3.53E-22 T 14-10-2018 IPR035895 HPr-like superfamily PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 Pfam PF00381 PTS HPr component phosphorylation site 4 82 1.6E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 40 55 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 PRINTS PR00107 Phosphocarrier protein signature 54 71 2.9E-12 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 PRINTS PR00107 Phosphocarrier protein signature 39 54 2.9E-12 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.9E-12 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_08030 2a3642adffa9d0248197f431865f3dd1 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site PACID_25560 1255628ae8691eab9b93d3ac47b50134 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 3.2E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25560 1255628ae8691eab9b93d3ac47b50134 61 Gene3D G3DSA:4.10.830.10 1 61 4.1E-31 T 14-10-2018 PACID_25560 1255628ae8691eab9b93d3ac47b50134 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.39 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z PACID_25560 1255628ae8691eab9b93d3ac47b50134 61 SUPERFAMILY SSF57716 3 61 2.92E-22 T 14-10-2018 PACID_25560 1255628ae8691eab9b93d3ac47b50134 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 Gene3D G3DSA:1.10.420.20 189 396 1.9E-191 T 14-10-2018 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 Hamap MF_01961 Catalase-peroxidase [katG]. 7 734 38.689 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 Gene3D G3DSA:1.10.520.10 432 733 2.0E-138 T 14-10-2018 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 264 287 1.1E-39 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 1.1E-39 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 66 91 1.1E-39 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 51 64 1.1E-39 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 25 47 1.1E-39 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 Gene3D G3DSA:1.10.420.10 586 709 2.0E-138 T 14-10-2018 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 22 733 0.0 T 14-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00458 Haem peroxidase superfamily signature 167 179 5.7E-15 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00458 Haem peroxidase superfamily signature 149 166 5.7E-15 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 5.7E-15 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00458 Haem peroxidase superfamily signature 256 271 5.7E-15 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 PRINTS PR00458 Haem peroxidase superfamily signature 89 103 5.7E-15 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 Pfam PF00141 Peroxidase 83 393 3.4E-43 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 Pfam PF00141 Peroxidase 401 707 3.5E-38 T 14-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 ProSitePatterns PS00436 Peroxidases active site signature. 89 100 - T 14-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 Gene3D G3DSA:1.10.520.10 21 429 1.9E-191 T 14-10-2018 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 SUPERFAMILY SSF48113 17 428 2.36E-135 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_29720 5f5b5f01b2d20fd5b4b58032557e08b7 734 SUPERFAMILY SSF48113 429 733 5.16E-106 T 14-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 PACID_27210 9dae3a09a8ad037777acca208ff6d4e0 342 Gene3D G3DSA:1.20.5.170 1 48 2.9E-12 T 14-10-2018 PACID_27210 9dae3a09a8ad037777acca208ff6d4e0 342 SUPERFAMILY SSF52540 2 325 3.94E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27210 9dae3a09a8ad037777acca208ff6d4e0 342 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 16 323 9.9E-95 T 14-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_27210 9dae3a09a8ad037777acca208ff6d4e0 342 Gene3D G3DSA:3.40.50.300 49 260 6.3E-76 T 14-10-2018 PACID_27210 9dae3a09a8ad037777acca208ff6d4e0 342 Gene3D G3DSA:1.10.287.130 263 328 4.8E-13 T 14-10-2018 PACID_27210 9dae3a09a8ad037777acca208ff6d4e0 342 Pfam PF03308 ArgK protein 21 291 5.3E-97 T 14-10-2018 PACID_11350 727521258e12c8e962a898e715719a3f 306 SUPERFAMILY SSF53807 24 303 6.38E-51 T 14-10-2018 PACID_11350 727521258e12c8e962a898e715719a3f 306 Gene3D G3DSA:3.40.50.1980 43 187 6.6E-32 T 14-10-2018 PACID_11350 727521258e12c8e962a898e715719a3f 306 Pfam PF01297 Zinc-uptake complex component A periplasmic 45 298 8.9E-42 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 PACID_32200 276388879cb21e69cad715a9611e0938 468 Pfam PF07907 YibE/F-like protein 157 393 2.6E-66 T 14-10-2018 IPR012507 YibE/F-like PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 SMART SM01240 13 484 4.7E-162 T 14-10-2018 PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 PIRSF PIRSF000130 1 489 2.1E-144 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 SUPERFAMILY SSF54631 93 203 1.77E-18 T 14-10-2018 PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 TIGRFAM TIGR01303 IMP_DH_rel_1: IMP dehydrogenase family protein 5 485 2.7E-217 T 14-10-2018 IPR005991 IMP dehydrogenase-related 1 PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 SMART SM00116 100 150 10.0 T 14-10-2018 IPR000644 CBS domain PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 SMART SM00116 158 206 0.64 T 14-10-2018 IPR000644 CBS domain PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 SUPERFAMILY SSF51412 14 483 1.44E-82 T 14-10-2018 PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 15 483 6.0E-93 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 Pfam PF00571 CBS domain 151 199 2.6E-6 T 14-10-2018 IPR000644 CBS domain PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 Pfam PF00571 CBS domain 101 140 4.3E-6 T 14-10-2018 IPR000644 CBS domain PACID_12240 effb46d53c504b2bc2ddc51deba4e6cf 489 Gene3D G3DSA:3.20.20.70 6 487 1.0E-130 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_00710 53b570cf6ac6536ad1148118dfb3d040 63 Pfam PF02412 Thrombospondin type 3 repeat 4 23 3.8E-4 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 PACID_00710 53b570cf6ac6536ad1148118dfb3d040 63 Pfam PF02412 Thrombospondin type 3 repeat 25 38 0.029 T 14-10-2018 IPR003367 Thrombospondin, type 3-like repeat GO:0005509|GO:0007155 Reactome: R-HSA-186797 PACID_00710 53b570cf6ac6536ad1148118dfb3d040 63 SUPERFAMILY SSF103647 4 38 3.14E-7 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 PACID_00710 53b570cf6ac6536ad1148118dfb3d040 63 Gene3D G3DSA:4.10.1080.10 2 62 2.6E-11 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 PACID_02510 f8fce98202e7c9bb442c7d22835f49ea 336 Gene3D G3DSA:1.20.1050.10 195 336 2.0E-53 T 14-10-2018 PACID_02510 f8fce98202e7c9bb442c7d22835f49ea 336 SUPERFAMILY SSF47616 196 334 2.78E-29 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PACID_02510 f8fce98202e7c9bb442c7d22835f49ea 336 PIRSF PIRSF015753 38 336 1.4E-100 T 14-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 PACID_02510 f8fce98202e7c9bb442c7d22835f49ea 336 Pfam PF13410 Glutathione S-transferase, C-terminal domain 223 293 1.0E-12 T 14-10-2018 PACID_02510 f8fce98202e7c9bb442c7d22835f49ea 336 Pfam PF13409 Glutathione S-transferase, N-terminal domain 69 173 4.4E-15 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PACID_02510 f8fce98202e7c9bb442c7d22835f49ea 336 SUPERFAMILY SSF52833 48 175 9.39E-11 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_02510 f8fce98202e7c9bb442c7d22835f49ea 336 Gene3D G3DSA:3.40.30.130 38 194 5.8E-53 T 14-10-2018 PACID_16580 0351beaf874439d81c42cb3591709f99 273 Gene3D G3DSA:3.30.70.1880 128 272 1.5E-29 T 14-10-2018 PACID_16580 0351beaf874439d81c42cb3591709f99 273 Pfam PF05949 Bacterial protein of unknown function (DUF881) 130 264 2.4E-34 T 14-10-2018 IPR010273 Protein of unknown function DUF881 PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 3 513 1.5E-212 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 4.6E-47 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 Gene3D G3DSA:3.40.50.720 137 320 8.8E-146 T 14-10-2018 PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 SMART SM01002 146 313 5.2E-72 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 SMART SM01003 4 137 2.9E-70 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 SUPERFAMILY SSF51735 138 317 6.0E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 Gene3D G3DSA:3.40.50.720 3 367 8.8E-146 T 14-10-2018 PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 370 3.7E-69 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 SUPERFAMILY SSF52283 1 168 3.57E-53 T 14-10-2018 PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 PIRSF PIRSF000203 1 513 5.7E-253 T 14-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 431 513 1.5E-32 T 14-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PACID_11560 5ff901b043bdaa6e89860b1e8fb71734 514 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 14-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 PACID_21790 202608fff19ae03a7e3383dcd515d85e 95 SUPERFAMILY SSF55594 4 84 1.7E-17 T 14-10-2018 IPR035895 HPr-like superfamily PACID_21790 202608fff19ae03a7e3383dcd515d85e 95 Pfam PF00381 PTS HPr component phosphorylation site 6 82 1.5E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_21790 202608fff19ae03a7e3383dcd515d85e 95 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.3E-6 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_21790 202608fff19ae03a7e3383dcd515d85e 95 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.3E-6 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_21790 202608fff19ae03a7e3383dcd515d85e 95 Gene3D G3DSA:3.30.1340.10 3 86 6.6E-18 T 14-10-2018 IPR035895 HPr-like superfamily PACID_21790 202608fff19ae03a7e3383dcd515d85e 95 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 6 80 1.7E-13 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like PACID_31220 0dd40f4a60d0523ce520541fd27cd6e5 421 SUPERFAMILY SSF53383 23 415 1.08E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_31220 0dd40f4a60d0523ce520541fd27cd6e5 421 Gene3D G3DSA:3.90.1150.10 47 412 4.3E-114 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_31220 0dd40f4a60d0523ce520541fd27cd6e5 421 Pfam PF00155 Aminotransferase class I and II 83 409 1.9E-29 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_31220 0dd40f4a60d0523ce520541fd27cd6e5 421 Gene3D G3DSA:3.40.640.10 83 306 4.3E-114 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_13360 64424c3964d27e62a29bc3591d917d03 414 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 10 401 1.9E-135 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PACID_13360 64424c3964d27e62a29bc3591d917d03 414 PIRSF PIRSF000151 1 413 2.4E-159 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 PACID_13360 64424c3964d27e62a29bc3591d917d03 414 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 2 412 38.943 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PACID_13360 64424c3964d27e62a29bc3591d917d03 414 Gene3D G3DSA:3.40.309.10 222 370 5.8E-147 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_13360 64424c3964d27e62a29bc3591d917d03 414 SUPERFAMILY SSF53720 4 412 3.53E-108 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_13360 64424c3964d27e62a29bc3591d917d03 414 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 319 340 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PACID_13360 64424c3964d27e62a29bc3591d917d03 414 Pfam PF00171 Aldehyde dehydrogenase family 6 280 8.9E-12 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_13360 64424c3964d27e62a29bc3591d917d03 414 Gene3D G3DSA:3.40.605.10 15 407 5.8E-147 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_28260 861aa4662aef6935f5e7673ffb8ab801 357 Gene3D G3DSA:3.40.190.10 142 352 1.9E-103 T 14-10-2018 PACID_28260 861aa4662aef6935f5e7673ffb8ab801 357 SUPERFAMILY SSF53850 42 352 2.08E-53 T 14-10-2018 PACID_28260 861aa4662aef6935f5e7673ffb8ab801 357 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 41 351 4.2E-72 T 14-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 PACID_28260 861aa4662aef6935f5e7673ffb8ab801 357 Pfam PF13343 Bacterial extracellular solute-binding protein 91 316 3.3E-24 T 14-10-2018 PACID_28260 861aa4662aef6935f5e7673ffb8ab801 357 Gene3D G3DSA:3.40.190.10 44 326 1.9E-103 T 14-10-2018 PACID_04030 c649ec469bed94b425c4a155d4bf2ad4 63 Gene3D G3DSA:3.50.50.60 3 54 1.3E-10 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_04030 c649ec469bed94b425c4a155d4bf2ad4 63 SUPERFAMILY SSF51905 1 52 1.3E-6 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 Gene3D G3DSA:1.10.260.40 1 57 1.9E-21 T 14-10-2018 PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 SUPERFAMILY SSF53822 64 314 6.56E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 SMART SM00354 4 74 7.5E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 Gene3D G3DSA:3.40.50.2300 160 289 4.1E-62 T 14-10-2018 PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 SUPERFAMILY SSF47413 3 62 4.55E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 Gene3D G3DSA:3.40.50.2300 58 306 4.1E-62 T 14-10-2018 PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 14-10-2018 PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 1.2E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_32160 0be0d2c88a1db62edf2c13e70bfdd08b 329 Pfam PF13377 Periplasmic binding protein-like domain 168 328 1.2E-31 T 14-10-2018 PACID_22250 7257d86e54d369751d2b4656945cebee 261 Pfam PF00005 ABC transporter 17 168 2.7E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_22250 7257d86e54d369751d2b4656945cebee 261 Gene3D G3DSA:3.40.50.300 1 256 4.1E-58 T 14-10-2018 PACID_22250 7257d86e54d369751d2b4656945cebee 261 SMART SM00382 26 225 1.0E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_22250 7257d86e54d369751d2b4656945cebee 261 SUPERFAMILY SSF52540 4 233 1.13E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23370 6f90791bcac456ad06410c08440f2be6 1196 SUPERFAMILY SSF52540 13 337 1.22E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23370 6f90791bcac456ad06410c08440f2be6 1196 Pfam PF00271 Helicase conserved C-terminal domain 988 1040 9.5E-6 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_23370 6f90791bcac456ad06410c08440f2be6 1196 SUPERFAMILY SSF52540 43 1041 1.44E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23370 6f90791bcac456ad06410c08440f2be6 1196 Gene3D G3DSA:3.40.50.300 926 1050 7.4E-12 T 14-10-2018 PACID_23370 6f90791bcac456ad06410c08440f2be6 1196 Gene3D G3DSA:3.40.50.300 11 127 3.1E-5 T 14-10-2018 PACID_04950 f730501d1339fb501212837dfebe7de9 290 Pfam PF00581 Rhodanese-like domain 23 125 2.2E-8 T 14-10-2018 IPR001763 Rhodanese-like domain PACID_04950 f730501d1339fb501212837dfebe7de9 290 SUPERFAMILY SSF52821 3 149 5.63E-30 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PACID_04950 f730501d1339fb501212837dfebe7de9 290 SMART SM00450 10 129 8.4E-6 T 14-10-2018 IPR001763 Rhodanese-like domain PACID_04950 f730501d1339fb501212837dfebe7de9 290 Gene3D G3DSA:3.40.250.10 5 148 7.5E-35 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily PACID_00460 e7825df83cb0376a98f25d23f7245501 807 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 351 806 1.6E-147 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PACID_00460 e7825df83cb0376a98f25d23f7245501 807 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 160 806 9.9E-209 T 14-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 PACID_00460 e7825df83cb0376a98f25d23f7245501 807 Pfam PF03477 ATP cone domain 44 130 1.6E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PACID_00460 e7825df83cb0376a98f25d23f7245501 807 SUPERFAMILY SSF51998 165 785 1.43E-153 T 14-10-2018 PACID_00460 e7825df83cb0376a98f25d23f7245501 807 Gene3D G3DSA:3.20.70.20 328 788 3.5E-154 T 14-10-2018 PACID_00460 e7825df83cb0376a98f25d23f7245501 807 Gene3D G3DSA:3.20.70.20 174 314 7.2E-31 T 14-10-2018 PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 SUPERFAMILY SSF102114 180 406 1.31E-43 T 14-10-2018 PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 189 209 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 6 478 59.379 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 Pfam PF00919 Uncharacterized protein family UPF0004 8 106 2.9E-28 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 8 476 9.5E-120 T 14-10-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 Pfam PF04055 Radical SAM superfamily 191 361 1.4E-20 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 Gene3D G3DSA:3.40.50.12160 6 135 1.0E-35 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 Gene3D G3DSA:3.80.30.20 184 416 2.1E-66 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 SMART SM00729 185 403 1.4E-40 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PACID_15190 4424bd1d22d9ab4db0284a0fefba209c 479 Gene3D G3DSA:2.40.50.140 418 479 1.4E-8 T 14-10-2018 PACID_26270 46e6409efe874d758ac69eccf8f728d9 324 Gene3D G3DSA:1.10.600.10 2 324 1.3E-99 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PACID_26270 46e6409efe874d758ac69eccf8f728d9 324 Pfam PF00348 Polyprenyl synthetase 34 274 5.6E-60 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 PACID_26270 46e6409efe874d758ac69eccf8f728d9 324 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 206 218 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site PACID_26270 46e6409efe874d758ac69eccf8f728d9 324 SUPERFAMILY SSF48576 8 323 6.05E-78 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 SUPERFAMILY SSF52540 147 347 4.77E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 SMART SM00487 180 355 2.6E-20 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 SMART SM00490 425 502 1.7E-10 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 Gene3D G3DSA:3.40.50.300 356 550 1.1E-43 T 14-10-2018 PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 SUPERFAMILY SSF52540 292 510 3.33E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 Gene3D G3DSA:3.40.50.300 174 355 1.7E-35 T 14-10-2018 PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 Pfam PF13625 Helicase conserved C-terminal domain 8 135 1.1E-45 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 Pfam PF04851 Type III restriction enzyme, res subunit 183 328 7.2E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PACID_09130 7956999126b7b2c69a498d3b2b2efc04 551 Pfam PF16203 ERCC3/RAD25/XPB C-terminal helicase 355 541 7.4E-41 T 14-10-2018 IPR032438 ERCC3/RAD25/XPB helicase, C-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 PACID_26550 4a88a97197bdf590f83df829a0757ce5 333 SUPERFAMILY SSF82549 10 332 7.06E-118 T 14-10-2018 PACID_26550 4a88a97197bdf590f83df829a0757ce5 333 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 328 2.0E-141 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 PACID_26550 4a88a97197bdf590f83df829a0757ce5 333 Gene3D G3DSA:3.30.1180.20 186 333 6.4E-49 T 14-10-2018 PACID_26550 4a88a97197bdf590f83df829a0757ce5 333 Gene3D G3DSA:3.40.50.10440 11 185 1.4E-64 T 14-10-2018 PACID_26550 4a88a97197bdf590f83df829a0757ce5 333 Pfam PF02733 Dak1 domain 18 327 6.7E-128 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_19590 77ed5d2ebaa0a5e1e4ab29c173a3eb5f 597 Pfam PF00535 Glycosyl transferase family 2 20 143 9.0E-17 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PACID_19590 77ed5d2ebaa0a5e1e4ab29c173a3eb5f 597 Gene3D G3DSA:3.90.550.10 8 246 3.1E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_19590 77ed5d2ebaa0a5e1e4ab29c173a3eb5f 597 SUPERFAMILY SSF53448 15 267 3.43E-39 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_19590 77ed5d2ebaa0a5e1e4ab29c173a3eb5f 597 Pfam PF11316 Putative rhamnosyl transferase 317 526 2.0E-42 T 14-10-2018 IPR021466 Putative rhamnosyl transferase PACID_26150 1569294450deed92d5c61bea097c3c60 614 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 12 186 3.2E-23 T 14-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 PACID_26150 1569294450deed92d5c61bea097c3c60 614 SUPERFAMILY SSF52518 210 475 3.29E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_26150 1569294450deed92d5c61bea097c3c60 614 SUPERFAMILY SSF53323 12 197 4.45E-14 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PACID_26150 1569294450deed92d5c61bea097c3c60 614 Gene3D G3DSA:3.40.50.920 491 592 2.8E-20 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_26150 1569294450deed92d5c61bea097c3c60 614 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 496 579 2.6E-8 T 14-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II PACID_26150 1569294450deed92d5c61bea097c3c60 614 Gene3D G3DSA:3.40.920.10 2 197 2.9E-11 T 14-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 PACID_26150 1569294450deed92d5c61bea097c3c60 614 SUPERFAMILY SSF52922 494 589 5.76E-14 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_26150 1569294450deed92d5c61bea097c3c60 614 Gene3D G3DSA:3.40.50.970 199 403 3.6E-66 T 14-10-2018 PACID_26150 1569294450deed92d5c61bea097c3c60 614 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 236 455 1.5E-53 T 14-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 PACID_26150 1569294450deed92d5c61bea097c3c60 614 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 1 589 2.4E-192 T 14-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 PACID_10200 81bfe49a8098bf98368ab1a7bf2154fe 277 Gene3D G3DSA:3.40.1280.10 109 275 1.4E-51 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PACID_10200 81bfe49a8098bf98368ab1a7bf2154fe 277 SUPERFAMILY SSF55315 12 102 5.3E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like PACID_10200 81bfe49a8098bf98368ab1a7bf2154fe 277 Gene3D G3DSA:3.30.1330.30 11 103 6.3E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like PACID_10200 81bfe49a8098bf98368ab1a7bf2154fe 277 SUPERFAMILY SSF75217 95 266 1.18E-40 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PACID_10200 81bfe49a8098bf98368ab1a7bf2154fe 277 SMART SM00967 35 107 4.3E-6 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 PACID_10200 81bfe49a8098bf98368ab1a7bf2154fe 277 Pfam PF00588 SpoU rRNA Methylase family 117 260 2.1E-36 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PACID_10200 81bfe49a8098bf98368ab1a7bf2154fe 277 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 35 102 1.6E-7 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 PACID_06560 6db9bbf296c8df88b1705521b2e8c0d4 272 Gene3D G3DSA:3.40.225.10 6 257 1.8E-51 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PACID_06560 6db9bbf296c8df88b1705521b2e8c0d4 272 SUPERFAMILY SSF53639 9 266 3.14E-32 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PACID_06560 6db9bbf296c8df88b1705521b2e8c0d4 272 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 237 4.7E-18 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PACID_06560 6db9bbf296c8df88b1705521b2e8c0d4 272 SMART SM01007 12 241 1.6E-9 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PACID_10880 989b80b10d423527e06dfdfc559e9f69 185 Pfam PF01872 RibD C-terminal domain 3 174 1.0E-16 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PACID_10880 989b80b10d423527e06dfdfc559e9f69 185 SUPERFAMILY SSF53597 4 182 4.58E-24 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_10880 989b80b10d423527e06dfdfc559e9f69 185 Gene3D G3DSA:3.40.430.10 3 180 2.5E-33 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_14700 bff7d24fcef3e15000d2c306f9c37003 472 SUPERFAMILY SSF52540 17 380 1.31E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14700 bff7d24fcef3e15000d2c306f9c37003 472 Gene3D G3DSA:3.40.50.300 28 165 1.3E-7 T 14-10-2018 PACID_14700 bff7d24fcef3e15000d2c306f9c37003 472 Gene3D G3DSA:3.40.50.300 241 452 2.2E-13 T 14-10-2018 PACID_12660 137b96bc250810bf33ca1de40cc27722 280 PRINTS PR00164 ABC-2 type transport system membrane protein signature 202 221 1.5E-16 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_12660 137b96bc250810bf33ca1de40cc27722 280 PRINTS PR00164 ABC-2 type transport system membrane protein signature 49 70 1.5E-16 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_12660 137b96bc250810bf33ca1de40cc27722 280 PRINTS PR00164 ABC-2 type transport system membrane protein signature 222 241 1.5E-16 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_12660 137b96bc250810bf33ca1de40cc27722 280 PRINTS PR00164 ABC-2 type transport system membrane protein signature 166 190 1.5E-16 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_12660 137b96bc250810bf33ca1de40cc27722 280 PRINTS PR00164 ABC-2 type transport system membrane protein signature 129 154 1.5E-16 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_12660 137b96bc250810bf33ca1de40cc27722 280 Pfam PF01061 ABC-2 type transporter 31 242 6.7E-19 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PACID_12660 137b96bc250810bf33ca1de40cc27722 280 PIRSF PIRSF006648 10 278 6.0E-20 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_09170 bf149200fbdff9bddcd25ad339a3029d 127 Pfam PF00313 'Cold-shock' DNA-binding domain 3 62 4.3E-13 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PACID_09170 bf149200fbdff9bddcd25ad339a3029d 127 PRINTS PR00050 Cold shock protein signature 4 19 2.7E-10 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PACID_09170 bf149200fbdff9bddcd25ad339a3029d 127 PRINTS PR00050 Cold shock protein signature 24 33 2.7E-10 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PACID_09170 bf149200fbdff9bddcd25ad339a3029d 127 PRINTS PR00050 Cold shock protein signature 38 56 2.7E-10 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PACID_09170 bf149200fbdff9bddcd25ad339a3029d 127 SUPERFAMILY SSF50249 1 66 1.35E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_09170 bf149200fbdff9bddcd25ad339a3029d 127 SMART SM00357 3 65 3.0E-15 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PACID_09170 bf149200fbdff9bddcd25ad339a3029d 127 Gene3D G3DSA:2.40.50.140 2 64 2.3E-16 T 14-10-2018 PACID_27230 a0283f91e936a9eea0309084115788a0 330 PIRSF PIRSF001220 1 329 9.8E-72 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 SMART SM00870 2 318 2.0E-93 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 PIRSF PIRSF500176 1 327 3.2E-95 T 14-10-2018 PACID_27230 a0283f91e936a9eea0309084115788a0 330 Gene3D G3DSA:3.40.50.1170 1 190 7.5E-59 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 SUPERFAMILY SSF53774 2 329 1.7E-86 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 PRINTS PR00139 Asparaginase/glutaminase family signature 78 96 1.0E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 PRINTS PR00139 Asparaginase/glutaminase family signature 3 14 1.0E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 PRINTS PR00139 Asparaginase/glutaminase family signature 255 273 1.0E-13 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 79 89 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 Pfam PF00710 Asparaginase, N-terminal 2 183 7.0E-54 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 PACID_27230 a0283f91e936a9eea0309084115788a0 330 Gene3D G3DSA:3.40.50.40 203 330 2.6E-35 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 PACID_20810 17ca4313967421230891496e49b3c22e 307 Pfam PF13614 AAA domain 54 229 1.3E-64 T 14-10-2018 IPR025669 AAA domain PACID_20810 17ca4313967421230891496e49b3c22e 307 SUPERFAMILY SSF52540 53 303 1.9E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20810 17ca4313967421230891496e49b3c22e 307 Gene3D G3DSA:3.40.50.300 48 306 2.8E-84 T 14-10-2018 PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 SUPERFAMILY SSF51261 530 681 2.27E-47 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 SUPERFAMILY SSF55604 4 78 1.14E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 Gene3D G3DSA:3.30.1360.60 1 76 6.1E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 Pfam PF02378 Phosphotransferase system, EIIC 119 413 4.3E-24 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 538 658 1.1E-39 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 17 34 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 600 612 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 Gene3D G3DSA:2.70.70.10 526 684 6.4E-50 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 537 659 6.7E-45 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 PACID_19180 63f738fd93b0ec6245088d5285f3346c 684 Pfam PF00367 phosphotransferase system, EIIB 7 38 3.8E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 Pfam PF13522 Glutamine amidotransferase domain 65 190 1.2E-21 T 14-10-2018 PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 Gene3D G3DSA:3.60.20.10 2 241 3.1E-73 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 Pfam PF01380 SIS domain 468 596 2.3E-19 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 Pfam PF01380 SIS domain 292 417 4.2E-33 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 Gene3D G3DSA:3.40.50.10490 449 600 5.0E-137 T 14-10-2018 PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 Gene3D G3DSA:3.40.50.10490 250 614 5.0E-137 T 14-10-2018 PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 SUPERFAMILY SSF56235 2 237 1.46E-67 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 615 39.763 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 SUPERFAMILY SSF53697 247 615 2.04E-106 T 14-10-2018 PACID_25100 0d3c1420a6486665f84c2e7a3b4a61a2 615 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 615 3.3E-245 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 Pfam PF00005 ABC transporter 28 185 1.1E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 SMART SM00382 325 517 2.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 SMART SM00382 36 242 2.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 SUPERFAMILY SSF52540 296 539 8.91E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 Pfam PF00005 ABC transporter 317 468 1.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 Gene3D G3DSA:3.40.50.300 295 553 1.0E-77 T 14-10-2018 PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 Gene3D G3DSA:3.40.50.300 4 294 1.1E-77 T 14-10-2018 PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 519 549 0.0016 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 272 2.7E-5 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 SUPERFAMILY SSF52540 7 257 3.34E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28670 f6aecec9f22a3762e7cb42c856a4c79c 553 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_29710 81c8dcc093314b8bfdc58f9b9a1facd3 132 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 10 124 3.3E-31 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PACID_20840 5bc2e1873db49296b9f67e2c5d3d8769 567 SUPERFAMILY SSF52317 294 543 1.95E-73 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_20840 5bc2e1873db49296b9f67e2c5d3d8769 567 Gene3D G3DSA:3.40.50.880 292 547 4.4E-98 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_20840 5bc2e1873db49296b9f67e2c5d3d8769 567 TIGRFAM TIGR00337 PyrG: CTP synthase 8 539 9.8E-234 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PACID_20840 5bc2e1873db49296b9f67e2c5d3d8769 567 Pfam PF00117 Glutamine amidotransferase class-I 307 538 1.7E-48 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_20840 5bc2e1873db49296b9f67e2c5d3d8769 567 Hamap MF_01227 CTP synthase [pyrG]. 8 544 49.729 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PACID_20840 5bc2e1873db49296b9f67e2c5d3d8769 567 Gene3D G3DSA:3.40.50.300 1 291 2.5E-130 T 14-10-2018 PACID_20840 5bc2e1873db49296b9f67e2c5d3d8769 567 Pfam PF06418 CTP synthase N-terminus 9 271 5.7E-123 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 PACID_20840 5bc2e1873db49296b9f67e2c5d3d8769 567 SUPERFAMILY SSF52540 9 272 2.29E-117 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 Gene3D G3DSA:1.20.1560.10 44 347 1.2E-24 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 45 597 3.5E-159 T 14-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 ProSitePatterns PS00211 ABC transporters family signature. 514 528 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 Pfam PF00664 ABC transporter transmembrane region 53 302 1.1E-9 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 SUPERFAMILY SSF52540 396 610 9.27E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 SMART SM00382 422 605 1.8E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 Gene3D G3DSA:3.40.50.300 392 611 1.5E-47 T 14-10-2018 PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 Pfam PF00005 ABC transporter 415 531 2.1E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_05260 4f8d436901eb14828787f288ffc3c2b8 611 SUPERFAMILY SSF90123 48 348 1.7E-34 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_24080 bdeaad01d75f3e2b6b09361e0a3a13d1 163 SUPERFAMILY SSF161093 9 150 5.75E-5 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 PACID_14230 d6654d45631579b55bd1c397f2c0bbe3 129 Gene3D G3DSA:3.40.50.1010 3 127 6.4E-7 T 14-10-2018 PACID_14230 d6654d45631579b55bd1c397f2c0bbe3 129 SUPERFAMILY SSF88723 1 123 1.26E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily PACID_14230 d6654d45631579b55bd1c397f2c0bbe3 129 Pfam PF01850 PIN domain 4 118 3.7E-9 T 14-10-2018 IPR002716 PIN domain PACID_09300 54c8c72c0407c79a8b29e68294d39a9c 328 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 9 314 4.2E-113 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 PACID_09300 54c8c72c0407c79a8b29e68294d39a9c 328 Gene3D G3DSA:2.20.150.10 17 112 3.7E-96 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 PACID_09300 54c8c72c0407c79a8b29e68294d39a9c 328 Pfam PF00294 pfkB family carbohydrate kinase 12 307 4.8E-52 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PACID_09300 54c8c72c0407c79a8b29e68294d39a9c 328 SUPERFAMILY SSF53613 8 314 2.34E-73 T 14-10-2018 IPR029056 Ribokinase-like PACID_09300 54c8c72c0407c79a8b29e68294d39a9c 328 Gene3D G3DSA:3.40.1190.20 12 297 3.7E-96 T 14-10-2018 IPR029056 Ribokinase-like PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 Gene3D G3DSA:1.10.285.10 6 380 1.5E-158 T 14-10-2018 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 Gene3D G3DSA:3.40.50.720 208 370 1.5E-158 T 14-10-2018 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 SUPERFAMILY SSF53223 5 195 3.1E-71 T 14-10-2018 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 201 443 1.6E-86 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 369 380 5.4E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 192 214 5.4E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 112 126 5.4E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 234 254 5.4E-30 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 Gene3D G3DSA:1.10.285.10 381 445 1.1E-8 T 14-10-2018 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 PIRSF PIRSF000185 20 445 4.6E-117 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 SUPERFAMILY SSF51735 201 444 3.05E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 Gene3D G3DSA:3.40.50.10860 53 188 1.5E-158 T 14-10-2018 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 SMART SM00839 203 443 1.6E-82 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PACID_22010 1687626e75fc834520a44c8593ee0bb9 445 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 55 183 2.6E-47 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 PACID_11420 a6e13a1c445b4f4ad4532a64173579bc 253 Pfam PF08220 DeoR-like helix-turn-helix domain 3 51 1.1E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_11420 a6e13a1c445b4f4ad4532a64173579bc 253 Pfam PF00455 DeoR C terminal sensor domain 69 224 1.3E-42 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PACID_11420 a6e13a1c445b4f4ad4532a64173579bc 253 SMART SM01134 66 226 2.2E-58 T 14-10-2018 PACID_11420 a6e13a1c445b4f4ad4532a64173579bc 253 SUPERFAMILY SSF100950 70 225 6.28E-22 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_11420 a6e13a1c445b4f4ad4532a64173579bc 253 SUPERFAMILY SSF46785 3 56 3.06E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_11420 a6e13a1c445b4f4ad4532a64173579bc 253 SMART SM00420 2 51 1.3E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_25010 62199d92e2d2625cf8bec2ea658ef154 444 SUPERFAMILY SSF54001 13 443 1.3E-100 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PACID_25010 62199d92e2d2625cf8bec2ea658ef154 444 Gene3D G3DSA:3.90.70.10 54 444 4.1E-141 T 14-10-2018 PACID_25010 62199d92e2d2625cf8bec2ea658ef154 444 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 65 76 - T 14-10-2018 IPR000169 Cysteine peptidase, cysteine active site PACID_25010 62199d92e2d2625cf8bec2ea658ef154 444 PIRSF PIRSF005700 2 444 1.5E-132 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 PACID_25010 62199d92e2d2625cf8bec2ea658ef154 444 Pfam PF03051 Peptidase C1-like family 8 443 6.5E-134 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 SUPERFAMILY SSF56059 3 227 5.7E-67 T 14-10-2018 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 Pfam PF00549 CoA-ligase 257 381 1.6E-12 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 PIRSF PIRSF001554 1 390 1.1E-132 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 Pfam PF08442 ATP-grasp domain 2 195 1.2E-67 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 250 274 - T 14-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 388 38.229 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 Gene3D G3DSA:3.30.1490.20 21 97 8.1E-79 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 SUPERFAMILY SSF52210 232 387 1.83E-39 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 Gene3D G3DSA:3.40.50.261 233 389 2.5E-44 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 Gene3D G3DSA:3.30.470.20 2 226 8.1E-79 T 14-10-2018 PACID_24710 ffa2387ef8d300efe8d107c8f2cbd1a2 391 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 2 387 6.0E-123 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_25210 2225503ce1f33768f96b9e065b57670c 234 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 45 222 5.8E-42 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 PACID_25210 2225503ce1f33768f96b9e065b57670c 234 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 226 28.889 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 PACID_25210 2225503ce1f33768f96b9e065b57670c 234 Pfam PF02390 Putative methyltransferase 51 219 8.2E-43 T 14-10-2018 PACID_25210 2225503ce1f33768f96b9e065b57670c 234 Gene3D G3DSA:3.40.50.150 8 232 1.7E-59 T 14-10-2018 PACID_25210 2225503ce1f33768f96b9e065b57670c 234 SUPERFAMILY SSF53335 50 224 5.57E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_03730 0725f559aeafaeaff1e026f8d9e728b3 466 Gene3D G3DSA:1.10.2020.10 44 138 3.0E-173 T 14-10-2018 PACID_03730 0725f559aeafaeaff1e026f8d9e728b3 466 Pfam PF02614 Glucuronate isomerase 2 464 1.1E-187 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 PACID_03730 0725f559aeafaeaff1e026f8d9e728b3 466 Hamap MF_00675 Uronate isomerase [uxaC]. 1 466 44.079 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 PACID_03730 0725f559aeafaeaff1e026f8d9e728b3 466 Gene3D G3DSA:3.20.20.140 5 464 3.0E-173 T 14-10-2018 PACID_03730 0725f559aeafaeaff1e026f8d9e728b3 466 SUPERFAMILY SSF51556 1 464 3.71E-160 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_24760 c2248825298674085b177de2b2ac0360 321 Pfam PF03180 NLPA lipoprotein 65 294 4.3E-68 T 14-10-2018 IPR004872 Lipoprotein NlpA family PACID_24760 c2248825298674085b177de2b2ac0360 321 SUPERFAMILY SSF53850 64 301 4.29E-70 T 14-10-2018 PACID_24760 c2248825298674085b177de2b2ac0360 321 Gene3D G3DSA:3.40.190.10 66 290 9.8E-87 T 14-10-2018 PACID_24760 c2248825298674085b177de2b2ac0360 321 Gene3D G3DSA:3.40.190.10 142 251 9.8E-87 T 14-10-2018 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 Pfam PF00905 Penicillin binding protein transpeptidase domain 339 580 2.4E-31 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 Gene3D G3DSA:3.40.710.10 263 638 1.4E-91 T 14-10-2018 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 Pfam PF00912 Transglycosylase 59 232 5.5E-57 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 Gene3D G3DSA:1.10.3810.10 49 248 5.6E-65 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 SUPERFAMILY SSF56601 218 637 5.45E-77 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 PRINTS PR01217 Proline rich extensin signature 696 717 9.5E-11 T 14-10-2018 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 PRINTS PR01217 Proline rich extensin signature 645 657 9.5E-11 T 14-10-2018 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 PRINTS PR01217 Proline rich extensin signature 662 678 9.5E-11 T 14-10-2018 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 PRINTS PR01217 Proline rich extensin signature 684 696 9.5E-11 T 14-10-2018 PACID_02000 ec98e1ee5be2061ce0fff1c39b334514 737 SUPERFAMILY SSF53955 47 248 1.8E-61 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 198 2.1E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 Pfam PF00072 Response regulator receiver domain 22 129 1.2E-9 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 SMART SM00421 154 216 5.8E-4 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 SUPERFAMILY SSF52172 16 139 1.76E-14 T 14-10-2018 IPR011006 CheY-like superfamily PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 2.2E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 2.2E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 2.2E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 Gene3D G3DSA:3.40.50.2300 19 151 9.8E-16 T 14-10-2018 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 SMART SM00448 18 129 6.1E-5 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 SUPERFAMILY SSF46894 147 223 1.02E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_33950 ea82c62148b2af10775bbdd3b19145dc 228 Gene3D G3DSA:1.10.10.10 152 220 1.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 SUPERFAMILY SSF56059 99 310 1.86E-46 T 14-10-2018 PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 PIRSF PIRSF039102 3 56 2.6E-7 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 PIRSF PIRSF039102 47 319 3.3E-66 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 Gene3D G3DSA:3.40.50.20 2 87 3.3E-22 T 14-10-2018 PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 Gene3D G3DSA:3.30.1490.20 114 187 5.7E-57 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 SUPERFAMILY SSF52440 4 99 5.66E-24 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 Pfam PF07478 D-ala D-ala ligase C-terminus 111 310 2.4E-43 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 Gene3D G3DSA:3.30.470.20 88 309 5.7E-57 T 14-10-2018 PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 6 314 29.283 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_34210 775207b9d7ffaff1828084e8e82238cf 323 Pfam PF01820 D-ala D-ala ligase N-terminus 8 89 2.8E-14 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_28050 d961e25e695aebe760fed4805d7bc004 417 Pfam PF02517 CAAX protease self-immunity 312 400 2.4E-14 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 PACID_03040 19c58cd5ffb1ba140d1900f82a785393 408 SUPERFAMILY SSF50939 75 317 4.71E-23 T 14-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 PACID_03040 19c58cd5ffb1ba140d1900f82a785393 408 Gene3D G3DSA:2.120.10.10 52 399 4.3E-83 T 14-10-2018 PACID_27600 603e6139a0d5855f38973bf81670074f 383 PIRSF PIRSF002756 3 383 8.1E-119 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 PACID_27600 603e6139a0d5855f38973bf81670074f 383 SUPERFAMILY SSF53850 63 382 1.49E-80 T 14-10-2018 PACID_27600 603e6139a0d5855f38973bf81670074f 383 Gene3D G3DSA:3.40.190.10 68 369 6.8E-97 T 14-10-2018 PACID_27600 603e6139a0d5855f38973bf81670074f 383 Pfam PF12849 PBP superfamily domain 58 352 4.0E-55 T 14-10-2018 IPR024370 PBP domain PACID_27600 603e6139a0d5855f38973bf81670074f 383 Gene3D G3DSA:3.40.190.10 149 323 6.8E-97 T 14-10-2018 PACID_27600 603e6139a0d5855f38973bf81670074f 383 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 64 382 7.8E-78 T 14-10-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 PACID_20440 194419ebb39b88de98775df224e06ce5 842 Pfam PF09397 Ftsk gamma domain 769 826 3.3E-21 T 14-10-2018 IPR018541 FtsK gamma domain PACID_20440 194419ebb39b88de98775df224e06ce5 842 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 120 235 1.3E-7 T 14-10-2018 IPR025199 DNA translocase FtsK, 4TM region PACID_20440 194419ebb39b88de98775df224e06ce5 842 SUPERFAMILY SSF52540 439 738 3.19E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20440 194419ebb39b88de98775df224e06ce5 842 Gene3D G3DSA:3.30.980.40 360 462 1.1E-27 T 14-10-2018 PACID_20440 194419ebb39b88de98775df224e06ce5 842 SMART SM00843 764 829 1.7E-26 T 14-10-2018 IPR018541 FtsK gamma domain PACID_20440 194419ebb39b88de98775df224e06ce5 842 SUPERFAMILY SSF46785 766 831 1.36E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_20440 194419ebb39b88de98775df224e06ce5 842 Gene3D G3DSA:3.40.50.300 463 752 4.9E-102 T 14-10-2018 PACID_20440 194419ebb39b88de98775df224e06ce5 842 Gene3D G3DSA:1.10.10.10 769 830 2.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_20440 194419ebb39b88de98775df224e06ce5 842 Pfam PF01580 FtsK/SpoIIIE family 466 665 1.3E-56 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 PIRSF PIRSF000460 1 791 7.0E-240 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 Gene3D G3DSA:3.40.50.2000 236 419 1.1E-6 T 14-10-2018 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 Pfam PF00343 Carbohydrate phosphorylase 364 620 4.2E-19 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 Pfam PF00343 Carbohydrate phosphorylase 128 173 3.1E-5 T 14-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 598 610 - T 14-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 Pfam PF11897 Protein of unknown function (DUF3417) 13 123 1.4E-33 T 14-10-2018 IPR024517 Glycogen phosphorylase, domain of unknown function DUF3417 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 Gene3D G3DSA:3.40.50.2000 95 210 2.5E-11 T 14-10-2018 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 TIGRFAM TIGR02094 more_P_ylases: alpha-glucan phosphorylases 111 709 4.2E-227 T 14-10-2018 IPR011834 Alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 SUPERFAMILY SSF53756 5 712 1.94E-190 T 14-10-2018 PACID_19130 5f209e8efdccb0c3371afa39a4fbadbf 850 Gene3D G3DSA:3.40.50.2000 420 661 1.0E-36 T 14-10-2018 PACID_19390 1aa58425fef13270fb1db608c397cacd 192 SUPERFAMILY SSF81573 80 138 1.24E-12 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily PACID_19390 1aa58425fef13270fb1db608c397cacd 192 Pfam PF00430 ATP synthase B/B' CF(0) 29 153 2.0E-24 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PACID_19390 1aa58425fef13270fb1db608c397cacd 192 Hamap MF_01398 ATP synthase subunit b [atpF]. 10 155 11.914 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 PACID_19390 1aa58425fef13270fb1db608c397cacd 192 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 30 174 1.6E-27 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 PACID_19390 1aa58425fef13270fb1db608c397cacd 192 Gene3D G3DSA:1.20.5.620 79 139 8.0E-7 T 14-10-2018 PACID_32210 bde79df57829926732f35dbdb6c64e8c 230 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 53 219 3.2E-40 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PACID_32210 bde79df57829926732f35dbdb6c64e8c 230 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 51 230 33.907 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PACID_32210 bde79df57829926732f35dbdb6c64e8c 230 SUPERFAMILY SSF55811 51 222 7.18E-43 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_32210 bde79df57829926732f35dbdb6c64e8c 230 Gene3D G3DSA:3.90.79.10 50 227 5.7E-46 T 14-10-2018 PACID_32210 bde79df57829926732f35dbdb6c64e8c 230 Pfam PF00293 NUDIX domain 78 201 4.0E-17 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_32210 bde79df57829926732f35dbdb6c64e8c 230 PIRSF PIRSF018427 35 229 1.5E-48 T 14-10-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 PACID_27090 d2d6527b14bbbdb3c3f8a8f86ac484f1 438 Pfam PF01547 Bacterial extracellular solute-binding protein 59 352 3.3E-27 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_27090 d2d6527b14bbbdb3c3f8a8f86ac484f1 438 Gene3D G3DSA:3.40.190.10 51 395 2.0E-128 T 14-10-2018 PACID_27090 d2d6527b14bbbdb3c3f8a8f86ac484f1 438 SUPERFAMILY SSF53850 45 420 9.32E-51 T 14-10-2018 PACID_27090 d2d6527b14bbbdb3c3f8a8f86ac484f1 438 Gene3D G3DSA:3.40.190.10 167 418 2.0E-128 T 14-10-2018 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 PIRSF PIRSF000097 1 266 7.1E-87 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 Pfam PF00248 Aldo/keto reductase family 17 257 6.5E-52 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_06460 08a2cd53e3edf858989696f3c293c410 270 PRINTS PR00069 Aldo-keto reductase signature 92 110 8.2E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 PRINTS PR00069 Aldo-keto reductase signature 125 142 8.2E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 PRINTS PR00069 Aldo-keto reductase signature 36 60 8.2E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 PRINTS PR00069 Aldo-keto reductase signature 193 217 8.2E-38 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 226 241 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 Gene3D G3DSA:3.20.20.100 1 270 2.0E-109 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_06460 08a2cd53e3edf858989696f3c293c410 270 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 40 57 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 125 142 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PACID_06460 08a2cd53e3edf858989696f3c293c410 270 SUPERFAMILY SSF51430 6 265 4.58E-91 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_26860 e9b9df0cfc4da2563439efe7b48a801d 122 Pfam PF14534 Domain of unknown function (DUF4440) 6 110 2.4E-13 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 PACID_26860 e9b9df0cfc4da2563439efe7b48a801d 122 SUPERFAMILY SSF54427 2 119 8.44E-15 T 14-10-2018 IPR032710 NTF2-like domain superfamily PACID_26860 e9b9df0cfc4da2563439efe7b48a801d 122 Gene3D G3DSA:3.10.450.50 2 118 2.3E-12 T 14-10-2018 PACID_26310 709aa41d204b6091a9ead0260eba66e0 99 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 6 94 2.6E-22 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like PACID_26310 709aa41d204b6091a9ead0260eba66e0 99 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 1 99 19.649 T 14-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 194 2.8E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 7.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 7.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 7.2E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 SUPERFAMILY SSF46894 126 202 8.5E-18 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 SMART SM00448 3 116 6.8E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 SMART SM00421 139 196 1.1E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 SUPERFAMILY SSF52172 2 130 3.13E-30 T 14-10-2018 IPR011006 CheY-like superfamily PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 Pfam PF00072 Response regulator receiver domain 6 116 2.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_08720 adfa4c0a88ebd4e0e58ae5ac430ef9c4 202 Gene3D G3DSA:3.40.50.12740 3 201 5.3E-59 T 14-10-2018 PACID_27950 683235e10ef0709dd710df31379e00ac 558 Pfam PF05140 ResB-like family 24 511 9.1E-126 T 14-10-2018 IPR007816 ResB-like domain PACID_09660 79ac975b2d84054a61bcdc9eae967c98 171 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 39 4.2E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09660 79ac975b2d84054a61bcdc9eae967c98 171 Gene3D G3DSA:1.10.357.10 1 170 6.1E-38 T 14-10-2018 PACID_09660 79ac975b2d84054a61bcdc9eae967c98 171 Pfam PF16914 Bacterial transcriptional repressor C-terminal 64 166 1.1E-35 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PACID_09660 79ac975b2d84054a61bcdc9eae967c98 171 SUPERFAMILY SSF48498 63 151 2.87E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_09660 79ac975b2d84054a61bcdc9eae967c98 171 SUPERFAMILY SSF46689 2 61 1.08E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_11200 2189657af57aea99e549d86a0712b12f 635 Gene3D G3DSA:1.10.196.20 18 60 1.5E-24 T 14-10-2018 IPR024067 Methylmalonyl-CoA mutase small subunit, N-terminal KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854 PACID_11200 2189657af57aea99e549d86a0712b12f 635 Pfam PF01642 Methylmalonyl-CoA mutase 63 517 6.8E-100 T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_11200 2189657af57aea99e549d86a0712b12f 635 TIGRFAM TIGR00642 mmCoA_mut_beta: methylmalonyl-CoA mutase, small subunit 20 634 2.4E-232 T 14-10-2018 IPR004608 Methylmalonyl-CoA mutase, beta chain GO:0004494|GO:0019652|GO:0031419 KEGG: 00280+5.4.99.2|KEGG: 00630+5.4.99.2|KEGG: 00640+5.4.99.2|KEGG: 00720+5.4.99.2|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854 PACID_11200 2189657af57aea99e549d86a0712b12f 635 SUPERFAMILY SSF51703 20 532 2.59E-125 T 14-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_11200 2189657af57aea99e549d86a0712b12f 635 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 374 399 - T 14-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_11200 2189657af57aea99e549d86a0712b12f 635 Gene3D G3DSA:3.20.20.240 62 496 6.4E-157 T 14-10-2018 PACID_11200 2189657af57aea99e549d86a0712b12f 635 SUPERFAMILY SSF52242 478 633 8.63E-29 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 PACID_11200 2189657af57aea99e549d86a0712b12f 635 Gene3D G3DSA:3.40.50.280 497 635 2.5E-45 T 14-10-2018 PACID_09320 aa2951d0e297ced904eabda11ef4abf2 291 Gene3D G3DSA:2.60.120.10 126 268 1.0E-72 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_09320 aa2951d0e297ced904eabda11ef4abf2 291 SUPERFAMILY SSF51182 15 252 3.56E-51 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PACID_09320 aa2951d0e297ced904eabda11ef4abf2 291 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 19 268 2.5E-85 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 PACID_09320 aa2951d0e297ced904eabda11ef4abf2 291 PIRSF PIRSF036628 4 274 3.5E-70 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 PACID_09320 aa2951d0e297ced904eabda11ef4abf2 291 Gene3D G3DSA:2.60.120.10 20 125 1.0E-72 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_09320 aa2951d0e297ced904eabda11ef4abf2 291 Pfam PF04962 KduI/IolB family 11 268 1.6E-79 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 PACID_33740 02be352318f27ef5ec1a22adb316f38a 316 SUPERFAMILY SSF100950 66 314 2.83E-62 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_33740 02be352318f27ef5ec1a22adb316f38a 316 Gene3D G3DSA:1.10.10.60 5 51 2.4E-16 T 14-10-2018 PACID_33740 02be352318f27ef5ec1a22adb316f38a 316 Pfam PF04198 Putative sugar-binding domain 66 313 5.9E-60 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 PACID_33740 02be352318f27ef5ec1a22adb316f38a 316 SUPERFAMILY SSF46689 15 52 6.63E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_33740 02be352318f27ef5ec1a22adb316f38a 316 Gene3D G3DSA:3.40.50.1360 52 315 4.3E-77 T 14-10-2018 PACID_33740 02be352318f27ef5ec1a22adb316f38a 316 Pfam PF13518 Helix-turn-helix domain 14 48 1.5E-7 T 14-10-2018 PACID_04110 f90a0aa1d14ce3056582aace977ed01e 370 SUPERFAMILY SSF47413 18 72 8.0E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_04110 f90a0aa1d14ce3056582aace977ed01e 370 Pfam PF06114 IrrE N-terminal-like domain 150 260 1.1E-11 T 14-10-2018 IPR010359 IrrE N-terminal-like domain PACID_04110 f90a0aa1d14ce3056582aace977ed01e 370 Gene3D G3DSA:1.10.260.40 7 68 4.4E-8 T 14-10-2018 PACID_04110 f90a0aa1d14ce3056582aace977ed01e 370 SMART SM00530 4 65 0.0096 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_31270 f0a637e035c46f66d1565bc0291caf2a 253 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 47 220 1.2E-20 T 14-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system PACID_01840 cf558335ce00321f40e4c7aa7e5ae34f 131 Gene3D G3DSA:1.20.1270.360 18 127 3.5E-8 T 14-10-2018 PACID_07190 975690e53bed96caa6de7a6445477ae0 282 Gene3D G3DSA:3.40.50.300 43 272 6.6E-66 T 14-10-2018 PACID_07190 975690e53bed96caa6de7a6445477ae0 282 Pfam PF00005 ABC transporter 64 210 1.5E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_07190 975690e53bed96caa6de7a6445477ae0 282 ProSitePatterns PS00211 ABC transporters family signature. 183 197 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_07190 975690e53bed96caa6de7a6445477ae0 282 SUPERFAMILY SSF52540 46 264 4.26E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07190 975690e53bed96caa6de7a6445477ae0 282 SMART SM00382 73 259 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_06620 f6d0776c4992de487f9c0480f3a0b6da 98 Pfam PF14242 Domain of unknown function (DUF4342) 14 94 2.7E-29 T 14-10-2018 IPR025642 Domain of unknown function DUF4342 PACID_31320 a0e33379cb377af965056d6af4bf41a7 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 219 235 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PACID_31320 a0e33379cb377af965056d6af4bf41a7 324 Gene3D G3DSA:3.40.50.720 28 311 5.9E-80 T 14-10-2018 PACID_31320 a0e33379cb377af965056d6af4bf41a7 324 SUPERFAMILY SSF52283 15 132 2.21E-7 T 14-10-2018 PACID_31320 a0e33379cb377af965056d6af4bf41a7 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 107 282 2.8E-41 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PACID_31320 a0e33379cb377af965056d6af4bf41a7 324 Gene3D G3DSA:3.40.50.720 100 288 5.9E-80 T 14-10-2018 PACID_31320 a0e33379cb377af965056d6af4bf41a7 324 SUPERFAMILY SSF51735 101 283 2.68E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_32800 4d052d515483acb6bba66dc793894426 908 Gene3D G3DSA:3.40.50.300 1 287 4.0E-14 T 14-10-2018 PACID_32800 4d052d515483acb6bba66dc793894426 908 Gene3D G3DSA:3.40.50.300 678 905 3.1E-10 T 14-10-2018 PACID_32800 4d052d515483acb6bba66dc793894426 908 Pfam PF13476 AAA domain 5 238 2.3E-6 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain PACID_32800 4d052d515483acb6bba66dc793894426 908 SUPERFAMILY SSF52540 1 895 1.17E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28110 c77a4f6a8c187e7dc73b78f934e9e2bd 363 Gene3D G3DSA:1.20.1260.110 149 289 1.1E-33 T 14-10-2018 IPR038331 DisA, linker domain superfamily PACID_28110 c77a4f6a8c187e7dc73b78f934e9e2bd 363 Pfam PF10635 DisA bacterial checkpoint controller linker region 148 281 5.2E-38 T 14-10-2018 IPR018906 DNA integrity scanning, DisA, linker region PACID_28110 c77a4f6a8c187e7dc73b78f934e9e2bd 363 SUPERFAMILY SSF47781 291 350 2.45E-11 T 14-10-2018 IPR010994 RuvA domain 2-like PACID_28110 c77a4f6a8c187e7dc73b78f934e9e2bd 363 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 30 143 2.1E-23 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal PACID_28110 c77a4f6a8c187e7dc73b78f934e9e2bd 363 Gene3D G3DSA:1.10.150.20 295 355 3.4E-11 T 14-10-2018 PACID_28110 c77a4f6a8c187e7dc73b78f934e9e2bd 363 SUPERFAMILY SSF143597 23 147 2.75E-27 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily PACID_28110 c77a4f6a8c187e7dc73b78f934e9e2bd 363 Gene3D G3DSA:3.40.1700.10 12 147 3.5E-48 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily PACID_32230 5fbe10afbc87fdb8a63dee8d7adda401 304 SUPERFAMILY SSF160240 214 293 8.63E-12 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 PACID_32230 5fbe10afbc87fdb8a63dee8d7adda401 304 Pfam PF01545 Cation efflux family 23 211 1.4E-42 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PACID_32230 5fbe10afbc87fdb8a63dee8d7adda401 304 SUPERFAMILY SSF161111 15 212 2.09E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_32230 5fbe10afbc87fdb8a63dee8d7adda401 304 Gene3D G3DSA:1.20.1510.10 17 211 4.4E-38 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_32230 5fbe10afbc87fdb8a63dee8d7adda401 304 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 17 295 2.2E-79 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PACID_31590 21b7d7962205d109205c45585915ba95 509 SUPERFAMILY SSF53067 252 492 5.61E-46 T 14-10-2018 PACID_31590 21b7d7962205d109205c45585915ba95 509 Gene3D G3DSA:3.30.420.40 252 493 2.3E-53 T 14-10-2018 PACID_31590 21b7d7962205d109205c45585915ba95 509 Gene3D G3DSA:3.30.420.40 1 241 1.0E-60 T 14-10-2018 PACID_31590 21b7d7962205d109205c45585915ba95 509 SUPERFAMILY SSF53067 5 252 1.2E-50 T 14-10-2018 PACID_31590 21b7d7962205d109205c45585915ba95 509 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_31590 21b7d7962205d109205c45585915ba95 509 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 250 4.9E-46 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_31590 21b7d7962205d109205c45585915ba95 509 PIRSF PIRSF000538 3 502 1.2E-94 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_31590 21b7d7962205d109205c45585915ba95 509 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 444 6.4E-27 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_29900 78ea9f0a38f27a0c39b6aa6fea5d888b 273 SUPERFAMILY SSF117987 34 110 4.71E-17 T 14-10-2018 PACID_29900 78ea9f0a38f27a0c39b6aa6fea5d888b 273 Gene3D G3DSA:3.30.70.1200 30 108 4.1E-18 T 14-10-2018 PACID_29900 78ea9f0a38f27a0c39b6aa6fea5d888b 273 Gene3D G3DSA:3.30.70.1210 125 264 2.8E-21 T 14-10-2018 PACID_29900 78ea9f0a38f27a0c39b6aa6fea5d888b 273 SUPERFAMILY SSF117987 126 264 4.84E-19 T 14-10-2018 PACID_29900 78ea9f0a38f27a0c39b6aa6fea5d888b 273 Pfam PF08798 CRISPR associated protein 34 264 6.7E-50 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 PACID_29900 78ea9f0a38f27a0c39b6aa6fea5d888b 273 SMART SM01101 33 264 3.5E-45 T 14-10-2018 IPR010179 CRISPR-associated protein Cse3 PACID_17980 1c14332acf4ce9f01f6d4fe59883c331 182 Gene3D G3DSA:3.40.50.2020 2 180 2.3E-56 T 14-10-2018 PACID_17980 1c14332acf4ce9f01f6d4fe59883c331 182 Pfam PF00156 Phosphoribosyl transferase domain 40 158 2.5E-16 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PACID_17980 1c14332acf4ce9f01f6d4fe59883c331 182 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 16 174 5.9E-58 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 PACID_17980 1c14332acf4ce9f01f6d4fe59883c331 182 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 13 181 33.799 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 PACID_17980 1c14332acf4ce9f01f6d4fe59883c331 182 SUPERFAMILY SSF53271 17 175 2.62E-43 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_14960 d2cfb82b615c9898d61e25f1ad60794e 81 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 18.485 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PACID_14960 d2cfb82b615c9898d61e25f1ad60794e 81 Gene3D G3DSA:1.10.1200.10 2 81 1.5E-23 T 14-10-2018 IPR036736 ACP-like superfamily PACID_14960 d2cfb82b615c9898d61e25f1ad60794e 81 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 5 80 4.0E-23 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PACID_14960 d2cfb82b615c9898d61e25f1ad60794e 81 SUPERFAMILY SSF47336 4 79 5.23E-20 T 14-10-2018 IPR036736 ACP-like superfamily PACID_14960 d2cfb82b615c9898d61e25f1ad60794e 81 Pfam PF00550 Phosphopantetheine attachment site 10 76 6.2E-13 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain PACID_14960 d2cfb82b615c9898d61e25f1ad60794e 81 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 37 76 3.0E-12 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 SUPERFAMILY SSF52518 360 547 9.06E-65 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 SUPERFAMILY SSF52922 554 685 1.23E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 Pfam PF02780 Transketolase, C-terminal domain 569 676 1.1E-11 T 14-10-2018 IPR033248 Transketolase, C-terminal domain PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 SUPERFAMILY SSF52518 5 338 8.97E-96 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 TIGRFAM TIGR00232 tktlase_bact: transketolase 13 684 5.4E-232 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 Gene3D G3DSA:3.40.50.970 347 552 9.0E-73 T 14-10-2018 PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 Pfam PF02779 Transketolase, pyrimidine binding domain 364 544 1.7E-45 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 ProSitePatterns PS00801 Transketolase signature 1. 18 38 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 Gene3D G3DSA:3.40.50.970 2 346 4.2E-105 T 14-10-2018 PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 ProSitePatterns PS00802 Transketolase signature 2. 487 503 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 SMART SM00861 365 545 2.7E-69 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 Gene3D G3DSA:3.40.50.920 559 685 1.5E-40 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_11490 18b2bfa0500728566217ba19090ba6e1 686 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 10 352 7.0E-128 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_24450 73a8040eecd17fae2f91ce20b2561616 325 Gene3D G3DSA:3.10.450.50 212 324 1.8E-5 T 14-10-2018 PACID_24450 73a8040eecd17fae2f91ce20b2561616 325 Hamap MF_00042 Ribonuclease H [rnhA]. 1 145 25.971 T 14-10-2018 IPR022892 Ribonuclease HI GO:0004523 PACID_24450 73a8040eecd17fae2f91ce20b2561616 325 Pfam PF00075 RNase H 5 136 3.1E-29 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 PACID_24450 73a8040eecd17fae2f91ce20b2561616 325 SUPERFAMILY SSF54427 218 323 1.42E-8 T 14-10-2018 IPR032710 NTF2-like domain superfamily PACID_24450 73a8040eecd17fae2f91ce20b2561616 325 Gene3D G3DSA:3.30.420.10 1 144 7.9E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_24450 73a8040eecd17fae2f91ce20b2561616 325 SUPERFAMILY SSF53098 2 137 3.41E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_16700 01c91f3991b4a6ec56f2da41720dfc39 246 Gene3D G3DSA:3.40.50.1580 5 239 1.1E-55 T 14-10-2018 PACID_16700 01c91f3991b4a6ec56f2da41720dfc39 246 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 11 233 9.6E-46 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 PACID_16700 01c91f3991b4a6ec56f2da41720dfc39 246 SUPERFAMILY SSF53167 6 242 1.44E-55 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 PACID_16700 01c91f3991b4a6ec56f2da41720dfc39 246 Pfam PF01048 Phosphorylase superfamily 11 233 4.4E-44 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 PACID_03630 1dde26efe07669af53cbc9b90b4e3b34 210 Gene3D G3DSA:1.10.357.10 3 208 2.4E-33 T 14-10-2018 PACID_03630 1dde26efe07669af53cbc9b90b4e3b34 210 SUPERFAMILY SSF48498 85 196 3.26E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_03630 1dde26efe07669af53cbc9b90b4e3b34 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 2.0E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_03630 1dde26efe07669af53cbc9b90b4e3b34 210 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 87 200 5.8E-9 T 14-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal PACID_03630 1dde26efe07669af53cbc9b90b4e3b34 210 SUPERFAMILY SSF46689 6 65 4.41E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 SUPERFAMILY SSF54211 2 227 1.97E-43 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 Gene3D G3DSA:3.30.70.890 210 344 4.3E-106 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 Pfam PF00288 GHMP kinases N terminal domain 99 170 3.1E-15 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 2 352 2.6E-115 T 14-10-2018 IPR005917 Phosphomevalonate kinase, bacteria KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922 PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 Gene3D G3DSA:3.30.230.10 6 209 4.3E-106 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 SUPERFAMILY SSF55060 212 351 1.46E-28 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 PRINTS PR00959 Mevalonate kinase family signature 6 30 5.4E-8 T 14-10-2018 PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 PRINTS PR00959 Mevalonate kinase family signature 108 130 5.4E-8 T 14-10-2018 PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 PRINTS PR00959 Mevalonate kinase family signature 310 327 5.4E-8 T 14-10-2018 PACID_26710 a46bd178921304de6b80d5ca257ab0ef 363 Pfam PF08544 GHMP kinases C terminal 278 343 3.0E-8 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain PACID_00230 93814984db1f764a220f813eb2e7572d 109 Pfam PF03551 Transcriptional regulator PadR-like family 17 88 5.0E-20 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal PACID_00230 93814984db1f764a220f813eb2e7572d 109 SUPERFAMILY SSF46785 5 106 9.66E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_00230 93814984db1f764a220f813eb2e7572d 109 Gene3D G3DSA:1.10.10.10 3 109 3.6E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_02040 6e55cf62ae6dcf868522d4a241abf80b 697 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 442 1.6E-70 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PACID_02040 6e55cf62ae6dcf868522d4a241abf80b 697 Gene3D G3DSA:1.20.1250.20 273 456 2.2E-16 T 14-10-2018 PACID_02040 6e55cf62ae6dcf868522d4a241abf80b 697 SUPERFAMILY SSF103473 9 672 8.24E-61 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_02040 6e55cf62ae6dcf868522d4a241abf80b 697 Pfam PF07690 Major Facilitator Superfamily 25 423 4.0E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_02040 6e55cf62ae6dcf868522d4a241abf80b 697 Gene3D G3DSA:1.20.1720.10 20 265 2.3E-48 T 14-10-2018 PACID_20620 5fb97dcd72c3643ce2d2c4297a9fe539 190 Pfam PF01957 NfeD-like C-terminal, partner-binding 62 175 1.0E-7 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain PACID_01880 3be2df154565095ebe4dc4cfd0d81c62 77 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 2 77 7.7E-15 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis PACID_01880 3be2df154565095ebe4dc4cfd0d81c62 77 Pfam PF02597 ThiS family 4 77 3.1E-9 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 PACID_01880 3be2df154565095ebe4dc4cfd0d81c62 77 Gene3D G3DSA:3.10.20.30 1 77 2.2E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PACID_01880 3be2df154565095ebe4dc4cfd0d81c62 77 SUPERFAMILY SSF54285 2 77 4.86E-10 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 SUPERFAMILY SSF57716 234 282 1.45E-15 T 14-10-2018 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 SMART SM00898 2 127 4.1E-42 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 142 229 1.1E-23 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 282 8.8E-87 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 283 40.685 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 SUPERFAMILY SSF46946 141 231 6.18E-29 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 Pfam PF06827 Zinc finger found in FPG and IleRS 255 283 2.8E-11 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 SMART SM01232 142 234 1.0E-45 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 Gene3D G3DSA:3.20.190.10 1 144 4.1E-35 T 14-10-2018 IPR035937 MutM-like, N-terminal PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 126 7.1E-34 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 SUPERFAMILY SSF81624 2 147 1.7E-33 T 14-10-2018 IPR035937 MutM-like, N-terminal PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 Gene3D G3DSA:1.10.8.50 145 284 4.0E-46 T 14-10-2018 PACID_21530 d132c8ab4fbd4204db801127c10ede70 285 ProSitePatterns PS01242 Zinc finger FPG-type signature. 258 282 - T 14-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 Pfam PF08220 DeoR-like helix-turn-helix domain 7 56 3.0E-11 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 Pfam PF00455 DeoR C terminal sensor domain 75 229 9.9E-37 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 SMART SM01134 72 232 7.5E-51 T 14-10-2018 PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 SUPERFAMILY SSF46785 6 63 5.71E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 SMART SM00420 6 57 4.5E-10 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 1.7E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 1.7E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 39 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PACID_33550 718fd51ea505fc58d09f4eef6e0759df 262 SUPERFAMILY SSF100950 76 231 1.56E-20 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_04260 26eb1467893a180b6e276ac11b265ba6 311 SUPERFAMILY SSF51126 28 283 2.67E-15 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor PACID_04260 26eb1467893a180b6e276ac11b265ba6 311 Gene3D G3DSA:2.160.20.10 25 284 1.1E-13 T 14-10-2018 IPR012334 Pectin lyase fold PACID_04260 26eb1467893a180b6e276ac11b265ba6 311 Pfam PF13229 Right handed beta helix region 66 225 1.9E-10 T 14-10-2018 IPR039448 Right handed beta helix domain PACID_04260 26eb1467893a180b6e276ac11b265ba6 311 SMART SM00710 140 169 780.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_04260 26eb1467893a180b6e276ac11b265ba6 311 SMART SM00710 201 222 2.5 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_04260 26eb1467893a180b6e276ac11b265ba6 311 SMART SM00710 94 115 2900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat PACID_18210 87940c44e182b4598f819795de9d8888 1507 Gene3D G3DSA:3.20.20.70 794 1223 6.3E-195 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_18210 87940c44e182b4598f819795de9d8888 1507 SUPERFAMILY SSF56235 21 433 5.08E-150 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_18210 87940c44e182b4598f819795de9d8888 1507 Gene3D G3DSA:3.20.20.70 438 793 4.9E-137 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_18210 87940c44e182b4598f819795de9d8888 1507 Gene3D G3DSA:2.160.20.60 1224 1493 4.2E-97 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 PACID_18210 87940c44e182b4598f819795de9d8888 1507 Pfam PF04898 Glutamate synthase central domain 457 743 2.9E-111 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 PACID_18210 87940c44e182b4598f819795de9d8888 1507 SUPERFAMILY SSF51395 445 1208 3.42E-266 T 14-10-2018 PACID_18210 87940c44e182b4598f819795de9d8888 1507 Pfam PF00310 Glutamine amidotransferases class-II 21 430 1.3E-176 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PACID_18210 87940c44e182b4598f819795de9d8888 1507 Pfam PF01493 GXGXG motif 1252 1433 9.1E-75 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 PACID_18210 87940c44e182b4598f819795de9d8888 1507 Pfam PF01645 Conserved region in glutamate synthase 808 1172 4.2E-155 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 PACID_18210 87940c44e182b4598f819795de9d8888 1507 SUPERFAMILY SSF69336 1221 1482 1.26E-83 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 PACID_18210 87940c44e182b4598f819795de9d8888 1507 Gene3D G3DSA:3.60.20.10 21 437 2.5E-176 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 30 184 1.2E-65 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 SUPERFAMILY SSF54768 30 97 1.67E-21 T 14-10-2018 PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 ProSitePatterns PS00585 Ribosomal protein S5 signature. 49 81 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 Gene3D G3DSA:3.30.160.20 24 93 1.4E-28 T 14-10-2018 PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 SUPERFAMILY SSF54211 100 179 3.54E-24 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 Pfam PF00333 Ribosomal protein S5, N-terminal domain 34 96 1.5E-26 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 Pfam PF03719 Ribosomal protein S5, C-terminal domain 108 178 1.4E-27 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 Gene3D G3DSA:3.30.230.10 98 188 4.9E-34 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_25520 f998fd598fc6f976a19cdfc752df8faf 214 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 4 184 34.135 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 PACID_07750 1bd59801004d837e69206d7620e4ea8a 398 Pfam PF00155 Aminotransferase class I and II 35 390 1.4E-47 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_07750 1bd59801004d837e69206d7620e4ea8a 398 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 242 255 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PACID_07750 1bd59801004d837e69206d7620e4ea8a 398 SUPERFAMILY SSF53383 14 392 2.86E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_07750 1bd59801004d837e69206d7620e4ea8a 398 Gene3D G3DSA:3.40.640.10 66 292 7.9E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_07750 1bd59801004d837e69206d7620e4ea8a 398 Gene3D G3DSA:3.90.1150.10 34 390 7.9E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_03960 31440bffad97d134fe60805c455b4e08 395 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 66 370 6.8E-109 T 14-10-2018 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA PACID_03960 31440bffad97d134fe60805c455b4e08 395 Gene3D G3DSA:3.40.50.1100 103 209 3.7E-89 T 14-10-2018 PACID_03960 31440bffad97d134fe60805c455b4e08 395 Gene3D G3DSA:3.40.50.1100 67 361 3.7E-89 T 14-10-2018 PACID_03960 31440bffad97d134fe60805c455b4e08 395 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 66 354 1.9E-53 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PACID_03960 31440bffad97d134fe60805c455b4e08 395 SUPERFAMILY SSF53686 62 373 8.25E-76 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PACID_22340 c3c50291b84a028a13b5606068db8af6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22340 c3c50291b84a028a13b5606068db8af6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 4.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22340 c3c50291b84a028a13b5606068db8af6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 4.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22340 c3c50291b84a028a13b5606068db8af6 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.5E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22340 c3c50291b84a028a13b5606068db8af6 248 SUPERFAMILY SSF51735 1 245 8.63E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_22340 c3c50291b84a028a13b5606068db8af6 248 Gene3D G3DSA:3.40.50.720 3 246 6.3E-52 T 14-10-2018 PACID_22340 c3c50291b84a028a13b5606068db8af6 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 243 1.1E-37 T 14-10-2018 PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 Gene3D G3DSA:3.40.50.12160 1 124 1.1E-25 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 Gene3D G3DSA:3.80.30.20 134 367 6.6E-86 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 SMART SM00729 136 354 3.0E-57 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 140 160 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 1 435 63.297 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 1 431 7.2E-138 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 Pfam PF00919 Uncharacterized protein family UPF0004 1 93 3.5E-20 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 1 431 7.2E-131 T 14-10-2018 PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 Pfam PF04055 Radical SAM superfamily 140 310 3.4E-29 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_15290 765e8eb434989fe5691cfe97cdcaa8c8 474 SUPERFAMILY SSF102114 124 359 5.1E-57 T 14-10-2018 PACID_28460 dcbc13882a08ccd6bc312df2e130fd74 125 SMART SM00905 11 122 5.4E-41 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PACID_28460 dcbc13882a08ccd6bc312df2e130fd74 125 Gene3D G3DSA:3.30.1130.10 9 124 2.1E-35 T 14-10-2018 PACID_28460 dcbc13882a08ccd6bc312df2e130fd74 125 TIGRFAM TIGR00526 folB_dom: FolB domain 11 125 8.7E-20 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PACID_28460 dcbc13882a08ccd6bc312df2e130fd74 125 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 11 122 1.3E-29 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PACID_28460 dcbc13882a08ccd6bc312df2e130fd74 125 Pfam PF02152 Dihydroneopterin aldolase 11 121 3.8E-28 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 PACID_28460 dcbc13882a08ccd6bc312df2e130fd74 125 SUPERFAMILY SSF55620 10 124 1.33E-29 T 14-10-2018 PACID_32690 a9a339f2ac692ee56dfa9d81942de45a 417 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 21 32 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_32690 a9a339f2ac692ee56dfa9d81942de45a 417 Gene3D G3DSA:3.30.70.3270 2 109 2.9E-9 T 14-10-2018 PACID_32690 a9a339f2ac692ee56dfa9d81942de45a 417 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_32690 a9a339f2ac692ee56dfa9d81942de45a 417 Pfam PF02754 Cysteine-rich domain 308 390 1.9E-4 T 14-10-2018 IPR004017 Cysteine-rich domain PACID_32690 a9a339f2ac692ee56dfa9d81942de45a 417 Pfam PF02754 Cysteine-rich domain 175 257 1.4E-5 T 14-10-2018 IPR004017 Cysteine-rich domain PACID_32690 a9a339f2ac692ee56dfa9d81942de45a 417 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 17 409 1.4E-84 T 14-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 PACID_32690 a9a339f2ac692ee56dfa9d81942de45a 417 Pfam PF13183 4Fe-4S dicluster domain 18 80 3.6E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_32690 a9a339f2ac692ee56dfa9d81942de45a 417 SUPERFAMILY SSF46548 17 102 2.96E-15 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_06240 096bb860286729a5ffd292478a9e5e32 345 Pfam PF03741 Integral membrane protein TerC family 67 272 6.0E-47 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 PACID_06240 096bb860286729a5ffd292478a9e5e32 345 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 3 318 1.1E-108 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 PACID_02690 2fb10d411a2f5b125dced884027cc9dd 192 SUPERFAMILY SSF103473 2 187 4.58E-14 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_02690 2fb10d411a2f5b125dced884027cc9dd 192 Gene3D G3DSA:1.20.1250.20 1 189 2.0E-48 T 14-10-2018 PACID_27630 e74f3ca9ea5bc8a86ed4ccc5d6c3c520 258 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_27630 e74f3ca9ea5bc8a86ed4ccc5d6c3c520 258 Pfam PF00005 ABC transporter 21 176 7.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_27630 e74f3ca9ea5bc8a86ed4ccc5d6c3c520 258 SUPERFAMILY SSF52540 5 245 2.2E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27630 e74f3ca9ea5bc8a86ed4ccc5d6c3c520 258 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 5 258 7.3E-115 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 PACID_27630 e74f3ca9ea5bc8a86ed4ccc5d6c3c520 258 SMART SM00382 29 223 2.4E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_27630 e74f3ca9ea5bc8a86ed4ccc5d6c3c520 258 Gene3D G3DSA:3.40.50.300 2 256 2.8E-64 T 14-10-2018 PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 Pfam PF00176 SNF2 family N-terminal domain 661 933 3.4E-51 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 SUPERFAMILY SSF52540 631 865 1.8E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 Pfam PF08455 Bacterial SNF2 helicase associated 441 631 1.3E-9 T 14-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 Pfam PF00271 Helicase conserved C-terminal domain 948 1057 2.2E-15 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 SUPERFAMILY SSF52540 866 1098 5.03E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 SMART SM00490 977 1057 2.2E-20 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 Gene3D G3DSA:3.40.50.300 873 1071 5.0E-74 T 14-10-2018 PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 SMART SM00487 642 832 2.2E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 Gene3D G3DSA:1.20.120.850 887 1099 5.0E-74 T 14-10-2018 PACID_09570 53f8802051cf452a580f2e69a8819a94 1116 Gene3D G3DSA:3.40.50.10810 647 866 6.5E-57 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily PACID_33480 69c201cf508d737b5f9d101efe39593f 286 SUPERFAMILY SSF53335 68 283 6.75E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_33480 69c201cf508d737b5f9d101efe39593f 286 Pfam PF13847 Methyltransferase domain 94 194 7.6E-11 T 14-10-2018 IPR025714 Methyltransferase domain PACID_33480 69c201cf508d737b5f9d101efe39593f 286 Gene3D G3DSA:3.40.50.150 66 256 8.3E-28 T 14-10-2018 PACID_09650 f475eefff94252a020144087d9f1516f 398 SUPERFAMILY SSF53901 206 397 1.21E-60 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_09650 f475eefff94252a020144087d9f1516f 398 SMART SM00825 Beta-ketoacyl synthase 2 390 3.5E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PACID_09650 f475eefff94252a020144087d9f1516f 398 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 237 2.0E-47 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PACID_09650 f475eefff94252a020144087d9f1516f 398 Gene3D G3DSA:3.40.47.10 251 395 1.0E-46 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_09650 f475eefff94252a020144087d9f1516f 398 SUPERFAMILY SSF53901 2 241 4.01E-61 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_09650 f475eefff94252a020144087d9f1516f 398 Gene3D G3DSA:3.40.47.10 1 244 1.8E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_09650 f475eefff94252a020144087d9f1516f 398 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 246 356 3.3E-32 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PACID_25230 a2040ee8507eae89c7f4de0bc21aa867 196 Gene3D G3DSA:3.40.50.150 13 196 4.9E-35 T 14-10-2018 PACID_25230 a2040ee8507eae89c7f4de0bc21aa867 196 SUPERFAMILY SSF53335 21 191 8.74E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_25230 a2040ee8507eae89c7f4de0bc21aa867 196 Pfam PF05175 Methyltransferase small domain 25 192 3.7E-27 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PACID_17160 ae1cda884d1d98dd51265099a6b4f175 194 Gene3D G3DSA:1.10.357.10 5 185 3.4E-33 T 14-10-2018 PACID_17160 ae1cda884d1d98dd51265099a6b4f175 194 SUPERFAMILY SSF46689 7 64 2.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_16370 d5e776fecb34e236fc92dd32df0cef1e 141 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 12 135 1.5E-44 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PACID_16370 d5e776fecb34e236fc92dd32df0cef1e 141 Pfam PF01641 SelR domain 16 136 2.7E-48 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 PACID_16370 d5e776fecb34e236fc92dd32df0cef1e 141 SUPERFAMILY SSF51316 10 139 1.46E-50 T 14-10-2018 IPR011057 Mss4-like superfamily PACID_16370 d5e776fecb34e236fc92dd32df0cef1e 141 Gene3D G3DSA:2.170.150.20 2 140 2.6E-51 T 14-10-2018 PACID_09140 fe3c8ced7d480443bbb87717f53505b3 715 Pfam PF13625 Helicase conserved C-terminal domain 443 565 5.0E-34 T 14-10-2018 IPR032830 Helicase XPB/Ssl2, N-terminal domain Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167246|Reactome: R-HSA-427413|Reactome: R-HSA-5696395|Reactome: R-HSA-5696400|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-72086|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73863|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-77075 PACID_17760 f60f541766d7dc497a4ab62f81fa7a7e 400 Hamap MF_00300 Chorismate synthase [aroC]. 2 374 33.408 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PACID_17760 f60f541766d7dc497a4ab62f81fa7a7e 400 SUPERFAMILY SSF103263 1 389 4.06E-130 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PACID_17760 f60f541766d7dc497a4ab62f81fa7a7e 400 PIRSF PIRSF001456 1 389 4.8E-119 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PACID_17760 f60f541766d7dc497a4ab62f81fa7a7e 400 ProSitePatterns PS00788 Chorismate synthase signature 2. 134 150 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PACID_17760 f60f541766d7dc497a4ab62f81fa7a7e 400 ProSitePatterns PS00787 Chorismate synthase signature 1. 8 23 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PACID_17760 f60f541766d7dc497a4ab62f81fa7a7e 400 Gene3D G3DSA:3.60.150.10 1 399 1.5E-149 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PACID_17760 f60f541766d7dc497a4ab62f81fa7a7e 400 Pfam PF01264 Chorismate synthase 2 367 1.1E-111 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PACID_17760 f60f541766d7dc497a4ab62f81fa7a7e 400 TIGRFAM TIGR00033 aroC: chorismate synthase 2 372 9.9E-122 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 PACID_00510 99832c9f3565f51064e85c662cfa3139 345 Pfam PF00801 PKD domain 201 271 1.0E-5 T 14-10-2018 IPR000601 PKD domain PACID_00510 99832c9f3565f51064e85c662cfa3139 345 Gene3D G3DSA:2.60.40.10 188 281 1.8E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_00510 99832c9f3565f51064e85c662cfa3139 345 SMART SM00089 196 282 0.0078 T 14-10-2018 IPR022409 PKD/Chitinase domain PACID_00510 99832c9f3565f51064e85c662cfa3139 345 SUPERFAMILY SSF49299 201 280 1.44E-7 T 14-10-2018 IPR035986 PKD domain superfamily PACID_00510 99832c9f3565f51064e85c662cfa3139 345 SUPERFAMILY SSF103647 277 316 1.27E-5 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 Gene3D G3DSA:3.30.465.10 360 434 4.2E-21 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 SMART SM00116 227 276 0.58 T 14-10-2018 IPR000644 CBS domain PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 SMART SM00116 292 340 3.8 T 14-10-2018 IPR000644 CBS domain PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 SMART SM01091 355 434 2.2E-26 T 14-10-2018 IPR005170 Transporter-associated domain PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 Pfam PF03471 Transporter associated domain 357 432 1.5E-21 T 14-10-2018 IPR005170 Transporter-associated domain PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 SUPERFAMILY SSF56176 354 442 1.34E-22 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 Pfam PF01595 Domain of unknown function DUF21 11 200 1.3E-34 T 14-10-2018 IPR002550 CNNM, transmembrane domain PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 Gene3D G3DSA:3.10.580.10 173 350 2.4E-38 T 14-10-2018 PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 Pfam PF00571 CBS domain 228 270 1.8E-4 T 14-10-2018 IPR000644 CBS domain PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 Pfam PF00571 CBS domain 285 340 5.3E-5 T 14-10-2018 IPR000644 CBS domain PACID_04370 b0e9711446d1a099e1f3f80e73fb3d80 444 SUPERFAMILY SSF54631 216 361 2.53E-23 T 14-10-2018 PACID_32700 091f4b1881d544fc4ef1f11c595f8896 448 PIRSF PIRSF000141 16 436 1.0E-79 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PACID_32700 091f4b1881d544fc4ef1f11c595f8896 448 Gene3D G3DSA:3.50.50.60 2 103 1.6E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_32700 091f4b1881d544fc4ef1f11c595f8896 448 SUPERFAMILY SSF51905 18 436 2.17E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_32700 091f4b1881d544fc4ef1f11c595f8896 448 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 19 432 4.1E-62 T 14-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 PACID_32700 091f4b1881d544fc4ef1f11c595f8896 448 Gene3D G3DSA:3.50.50.60 178 448 8.9E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_32700 091f4b1881d544fc4ef1f11c595f8896 448 Pfam PF00890 FAD binding domain 19 416 6.3E-34 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_10770 e4066f2c11cbaf354a354404051863b1 111 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 19 96 3.3E-31 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 PACID_10770 e4066f2c11cbaf354a354404051863b1 111 SMART SM00530 27 82 3.6E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_10770 e4066f2c11cbaf354a354404051863b1 111 Pfam PF01381 Helix-turn-helix 35 81 2.9E-9 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_10770 e4066f2c11cbaf354a354404051863b1 111 Gene3D G3DSA:1.10.260.40 11 109 2.8E-34 T 14-10-2018 PACID_10770 e4066f2c11cbaf354a354404051863b1 111 SUPERFAMILY SSF47413 22 105 1.02E-26 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_07040 34854e7a20b33700a8350af85426caed 222 SUPERFAMILY SSF51569 4 219 9.52E-69 T 14-10-2018 PACID_07040 34854e7a20b33700a8350af85426caed 222 Pfam PF01791 DeoC/LacD family aldolase 12 204 1.9E-17 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_07040 34854e7a20b33700a8350af85426caed 222 Gene3D G3DSA:3.20.20.70 1 220 1.7E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_07040 34854e7a20b33700a8350af85426caed 222 SMART SM01133 8 219 1.4E-78 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_07040 34854e7a20b33700a8350af85426caed 222 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 7 221 32.087 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 PACID_07040 34854e7a20b33700a8350af85426caed 222 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 8 214 2.8E-68 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_07040 34854e7a20b33700a8350af85426caed 222 PIRSF PIRSF001357 3 222 1.5E-67 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_28500 c1f6eebc70d31b44e9003e29753f5e5f 184 Gene3D G3DSA:3.40.50.2020 2 183 2.6E-60 T 14-10-2018 PACID_28500 c1f6eebc70d31b44e9003e29753f5e5f 184 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 13 177 4.1E-58 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 PACID_28500 c1f6eebc70d31b44e9003e29753f5e5f 184 Pfam PF00156 Phosphoribosyl transferase domain 15 164 1.3E-23 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PACID_28500 c1f6eebc70d31b44e9003e29753f5e5f 184 SUPERFAMILY SSF53271 5 182 8.65E-51 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_23110 7235b85d4c951f9921ba08334c2132f8 200 Gene3D G3DSA:3.40.30.10 1 200 1.3E-65 T 14-10-2018 PACID_23110 7235b85d4c951f9921ba08334c2132f8 200 SUPERFAMILY SSF52833 1 160 7.27E-16 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_27750 a1a13a02829062a92bcc79ee8fb1117a 296 SUPERFAMILY SSF81345 17 267 5.75E-43 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_27750 a1a13a02829062a92bcc79ee8fb1117a 296 Pfam PF00950 ABC 3 transport family 16 269 2.8E-70 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PACID_27750 a1a13a02829062a92bcc79ee8fb1117a 296 TIGRFAM TIGR03770 anch_rpt_perm: anchored repeat-type ABC transporter, permease subunit 3 271 2.9E-133 T 14-10-2018 IPR022392 Anchored repeat-type ABC transporter, permease subunit PACID_27750 a1a13a02829062a92bcc79ee8fb1117a 296 Gene3D G3DSA:1.10.3470.10 38 274 3.5E-13 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_07160 6369f03f34d193ddc47761f9dc644d21 478 PIRSF PIRSF006060 1 478 3.1E-84 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_07160 6369f03f34d193ddc47761f9dc644d21 478 Pfam PF00324 Amino acid permease 31 463 2.4E-118 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PACID_07160 6369f03f34d193ddc47761f9dc644d21 478 Gene3D G3DSA:1.20.1740.10 24 475 2.7E-66 T 14-10-2018 PACID_07160 6369f03f34d193ddc47761f9dc644d21 478 ProSitePatterns PS00218 Amino acid permeases signature. 56 86 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PACID_20700 405d7118e5bac267b3752ec52a454e84 919 SMART SM00490 347 433 4.0E-16 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_20700 405d7118e5bac267b3752ec52a454e84 919 SMART SM01142 745 917 1.5E-49 T 14-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal PACID_20700 405d7118e5bac267b3752ec52a454e84 919 SMART SM00487 12 196 8.0E-28 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_20700 405d7118e5bac267b3752ec52a454e84 919 Gene3D G3DSA:1.10.3380.30 704 909 5.9E-20 T 14-10-2018 PACID_20700 405d7118e5bac267b3752ec52a454e84 919 Gene3D G3DSA:3.40.50.300 2 189 5.0E-61 T 14-10-2018 PACID_20700 405d7118e5bac267b3752ec52a454e84 919 Gene3D G3DSA:3.40.50.300 190 464 1.8E-57 T 14-10-2018 PACID_20700 405d7118e5bac267b3752ec52a454e84 919 Pfam PF00270 DEAD/DEAH box helicase 18 165 1.0E-16 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_20700 405d7118e5bac267b3752ec52a454e84 919 Pfam PF08148 DSHCT (NUC185) domain 750 912 4.2E-32 T 14-10-2018 IPR012961 ATP-dependent RNA helicase Ski2, C-terminal PACID_20700 405d7118e5bac267b3752ec52a454e84 919 Pfam PF00271 Helicase conserved C-terminal domain 351 433 3.5E-6 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_20700 405d7118e5bac267b3752ec52a454e84 919 SUPERFAMILY SSF52540 28 447 1.12E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_26370 7d410811c38fe255cc4bc0d5bca9a811 256 Gene3D G3DSA:1.10.10.1590 33 103 7.3E-22 T 14-10-2018 PACID_26370 7d410811c38fe255cc4bc0d5bca9a811 256 Gene3D G3DSA:3.40.30.10 104 206 8.1E-28 T 14-10-2018 PACID_26370 7d410811c38fe255cc4bc0d5bca9a811 256 PIRSF PIRSF000216 17 242 9.4E-75 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26370 7d410811c38fe255cc4bc0d5bca9a811 256 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 44 185 2.1E-46 T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26370 7d410811c38fe255cc4bc0d5bca9a811 256 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 44 185 6.8E-50 T 14-10-2018 PACID_26370 7d410811c38fe255cc4bc0d5bca9a811 256 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 143 161 - T 14-10-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26370 7d410811c38fe255cc4bc0d5bca9a811 256 SUPERFAMILY SSF52833 35 194 2.91E-49 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 Gene3D G3DSA:3.90.1150.10 34 394 1.7E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 Gene3D G3DSA:3.40.640.10 67 311 1.7E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 25 400 8.2E-129 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 SUPERFAMILY SSF53383 22 401 2.15E-115 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 PIRSF PIRSF000521 178 404 3.3E-35 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 PIRSF PIRSF000521 33 133 6.8E-11 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 PIRSF PIRSF000521 128 163 0.0017 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 Pfam PF00202 Aminotransferase class-III 33 397 3.6E-106 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_20320 b534dc88964d32f9f5102ea8fb5e23bb 412 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 23 404 64.368 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PACID_05880 7358f7dc39c7fd45f3ea3cb88152d3f5 847 SUPERFAMILY SSF51445 11 758 2.23E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_05880 7358f7dc39c7fd45f3ea3cb88152d3f5 847 SMART SM00642 8 717 9.4E-7 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_05880 7358f7dc39c7fd45f3ea3cb88152d3f5 847 TIGRFAM TIGR02401 trehalose_TreY: malto-oligosyltrehalose synthase 11 845 1.3E-246 T 14-10-2018 IPR012767 Maltooligosyl trehalose synthase KEGG: 00500+5.4.99.15|MetaCyc: PWY-2661 PACID_05880 7358f7dc39c7fd45f3ea3cb88152d3f5 847 Pfam PF00128 Alpha amylase, catalytic domain 31 101 3.9E-18 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_28710 5197d2e707e66985171a238dd81b8689 290 Pfam PF01063 Amino-transferase class IV 40 265 4.2E-43 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PACID_28710 5197d2e707e66985171a238dd81b8689 290 SUPERFAMILY SSF56752 21 276 4.97E-53 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PACID_28710 5197d2e707e66985171a238dd81b8689 290 Gene3D G3DSA:3.30.470.10 5 120 2.3E-29 T 14-10-2018 PACID_28710 5197d2e707e66985171a238dd81b8689 290 Gene3D G3DSA:3.20.10.10 127 290 1.3E-53 T 14-10-2018 PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 Pfam PF13377 Periplasmic binding protein-like domain 176 332 2.3E-38 T 14-10-2018 PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 10 28 - T 14-10-2018 PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 SUPERFAMILY SSF47413 8 65 1.38E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 54 2.8E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 Gene3D G3DSA:3.40.50.2300 84 323 1.2E-75 T 14-10-2018 PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 Gene3D G3DSA:1.10.260.40 1 65 3.8E-24 T 14-10-2018 PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 SUPERFAMILY SSF53822 67 334 8.52E-62 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 Gene3D G3DSA:3.40.50.2300 167 294 1.2E-75 T 14-10-2018 PACID_21090 8fbc2e701e294ebe16407acae9e2c748 337 SMART SM00354 7 77 3.5E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_05020 ba9e0977d260f451490fcd1c7efcf8b4 209 SUPERFAMILY SSF55144 4 173 2.46E-28 T 14-10-2018 IPR009097 Cyclic phosphodiesterase PACID_05020 ba9e0977d260f451490fcd1c7efcf8b4 209 Pfam PF13563 2'-5' RNA ligase superfamily 27 144 9.8E-14 T 14-10-2018 PACID_05020 ba9e0977d260f451490fcd1c7efcf8b4 209 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 4 171 5.2E-24 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PACID_05020 ba9e0977d260f451490fcd1c7efcf8b4 209 Gene3D G3DSA:3.90.1140.10 4 197 2.8E-33 T 14-10-2018 PACID_05020 ba9e0977d260f451490fcd1c7efcf8b4 209 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 3 195 18.572 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 20 515 7.0E-133 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 Gene3D G3DSA:3.30.930.10 176 517 8.4E-105 T 14-10-2018 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 Pfam PF00152 tRNA synthetases class II (D, K and N) 177 513 2.9E-66 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 26 516 33.526 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 SUPERFAMILY SSF55681 177 514 6.13E-98 T 14-10-2018 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 SUPERFAMILY SSF50249 19 170 3.21E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 259 272 1.2E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 399 415 1.2E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 277 294 1.2E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 224 1.2E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 PRINTS PR00982 Lysyl-tRNA synthetase signature 230 246 1.2E-30 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 Pfam PF01336 OB-fold nucleic acid binding domain 78 160 5.6E-11 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PACID_05640 33ecbbb89201f00becec07b53ccdea4a 517 Gene3D G3DSA:2.40.50.140 19 172 9.5E-36 T 14-10-2018 PACID_27080 be71a94e555945a54e6a2f263346bf17 298 SUPERFAMILY SSF161098 53 283 2.49E-45 T 14-10-2018 IPR035906 MetI-like superfamily PACID_27080 be71a94e555945a54e6a2f263346bf17 298 Gene3D G3DSA:1.10.3720.10 51 296 4.8E-54 T 14-10-2018 IPR035906 MetI-like superfamily PACID_27080 be71a94e555945a54e6a2f263346bf17 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 283 3.8E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_25980 a48a7979ab36acb4642ddf3817f97748 219 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 163 213 7.5E-16 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 PACID_25980 a48a7979ab36acb4642ddf3817f97748 219 Gene3D G3DSA:1.20.5.1030 160 215 1.1E-13 T 14-10-2018 IPR038379 SecE superfamily PACID_25980 a48a7979ab36acb4642ddf3817f97748 219 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 165 193 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_25980 a48a7979ab36acb4642ddf3817f97748 219 Hamap MF_00422 Protein translocase subunit SecE [secE]. 160 215 11.715 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_25980 a48a7979ab36acb4642ddf3817f97748 219 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 163 213 2.9E-16 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 PACID_33050 dae27d7e85f3c7211f376a0045f61e4d 79 SMART SM00966 3 48 7.2E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PACID_33050 dae27d7e85f3c7211f376a0045f61e4d 79 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 42 7.8E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PACID_33050 dae27d7e85f3c7211f376a0045f61e4d 79 SUPERFAMILY SSF89447 2 42 3.53E-9 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily PACID_33050 dae27d7e85f3c7211f376a0045f61e4d 79 Gene3D G3DSA:2.10.260.10 2 41 8.8E-8 T 14-10-2018 PACID_21220 e49e00d907ebbc4b3e7343418160af5e 512 SMART SM00813 291 501 1.1E-60 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 PACID_21220 e49e00d907ebbc4b3e7343418160af5e 512 Gene3D G3DSA:2.60.40.1180 6 505 1.7E-205 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_21220 e49e00d907ebbc4b3e7343418160af5e 512 Gene3D G3DSA:3.20.20.80 18 387 1.7E-205 T 14-10-2018 PACID_21220 e49e00d907ebbc4b3e7343418160af5e 512 SUPERFAMILY SSF51011 368 507 2.37E-28 T 14-10-2018 PACID_21220 e49e00d907ebbc4b3e7343418160af5e 512 SUPERFAMILY SSF51445 18 384 4.8E-109 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_21220 e49e00d907ebbc4b3e7343418160af5e 512 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 291 501 1.3E-37 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PIRSF PIRSF000126 1 269 5.3E-71 T 14-10-2018 PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 90 101 2.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 2.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 2.9E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 15 32 6.3E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 6.3E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 90 101 6.3E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 6.3E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 6.3E-23 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 SUPERFAMILY SSF51735 13 260 2.23E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 Pfam PF00106 short chain dehydrogenase 15 204 3.6E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 14 198 9.2E-4 T 14-10-2018 PACID_27910 e6387cc2a75540b52ff3a8920c140eb2 269 Gene3D G3DSA:3.40.50.720 11 267 9.4E-58 T 14-10-2018 PACID_10460 b1e27a9ebe47b5e95c3c34a797a6aa8d 184 Pfam PF14030 Protein of unknown function (DUF4245) 8 180 2.1E-39 T 14-10-2018 IPR025339 Protein of unknown function DUF4245 PACID_02190 2c5b364dbf520ab626d45adc11fc2e4e 373 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 21 365 1.3E-140 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 PACID_02190 2c5b364dbf520ab626d45adc11fc2e4e 373 PIRSF PIRSF015658 4 371 1.5E-156 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 PACID_02190 2c5b364dbf520ab626d45adc11fc2e4e 373 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 21 369 4.5E-152 T 14-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 PACID_12850 96f25266bde29f434d1cd5615007b693 384 SUPERFAMILY SSF53756 3 366 1.59E-90 T 14-10-2018 PACID_12850 96f25266bde29f434d1cd5615007b693 384 Gene3D G3DSA:3.40.50.2000 181 350 2.3E-43 T 14-10-2018 PACID_12850 96f25266bde29f434d1cd5615007b693 384 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 143 2.0E-34 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_12850 96f25266bde29f434d1cd5615007b693 384 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 361 4.6E-76 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_12850 96f25266bde29f434d1cd5615007b693 384 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 366 31.031 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_12850 96f25266bde29f434d1cd5615007b693 384 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 195 345 1.0E-29 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 PACID_12850 96f25266bde29f434d1cd5615007b693 384 Gene3D G3DSA:3.40.50.2000 1 180 1.9E-50 T 14-10-2018 PACID_19080 6820b159176469a09dcfae0ee71374d8 365 Pfam PF03054 tRNA methyl transferase 1 352 5.3E-115 T 14-10-2018 PACID_19080 6820b159176469a09dcfae0ee71374d8 365 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 1 352 8.3E-91 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PACID_19080 6820b159176469a09dcfae0ee71374d8 365 Gene3D G3DSA:2.30.30.280 212 276 3.0E-15 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PACID_19080 6820b159176469a09dcfae0ee71374d8 365 Gene3D G3DSA:2.40.30.10 278 356 2.2E-12 T 14-10-2018 PACID_19080 6820b159176469a09dcfae0ee71374d8 365 SUPERFAMILY SSF52402 1 242 2.65E-49 T 14-10-2018 PACID_19080 6820b159176469a09dcfae0ee71374d8 365 Gene3D G3DSA:3.40.50.620 1 210 7.6E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_19080 6820b159176469a09dcfae0ee71374d8 365 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 1 353 36.406 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 PACID_06950 7fd5f4c63fbdf15810b485df48deace0 503 SUPERFAMILY SSF100950 230 502 1.51E-82 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_06950 7fd5f4c63fbdf15810b485df48deace0 503 SUPERFAMILY SSF100950 3 227 1.4E-67 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_06950 7fd5f4c63fbdf15810b485df48deace0 503 Gene3D G3DSA:3.40.1080.10 4 173 9.4E-15 T 14-10-2018 PACID_06950 7fd5f4c63fbdf15810b485df48deace0 503 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 334 468 2.0E-39 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PACID_06950 7fd5f4c63fbdf15810b485df48deace0 503 Gene3D G3DSA:3.30.750.70 249 325 7.5E-8 T 14-10-2018 PACID_06950 7fd5f4c63fbdf15810b485df48deace0 503 Gene3D G3DSA:3.40.1080.20 341 481 2.2E-38 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily PACID_06950 7fd5f4c63fbdf15810b485df48deace0 503 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 8 221 2.0E-28 T 14-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 PACID_06950 7fd5f4c63fbdf15810b485df48deace0 503 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 10 501 1.4E-239 T 14-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 Gene3D G3DSA:3.40.50.2300 169 300 7.7E-49 T 14-10-2018 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 SUPERFAMILY SSF53822 65 349 4.38E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 51 1.8E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 Gene3D G3DSA:1.10.260.40 1 58 2.9E-20 T 14-10-2018 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 SMART SM00354 3 74 1.1E-23 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 SUPERFAMILY SSF47413 3 62 7.67E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 Pfam PF13377 Periplasmic binding protein-like domain 182 317 3.5E-22 T 14-10-2018 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 Gene3D G3DSA:3.40.50.2300 59 314 7.7E-49 T 14-10-2018 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 1.7E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_06690 4744c9259fda5ec5ba6f08597212806f 350 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 1.7E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_12700 9cfb9fc03d76396a684a27192e733611 125 Gene3D G3DSA:2.40.50.100 2 123 1.4E-44 T 14-10-2018 PACID_12700 9cfb9fc03d76396a684a27192e733611 125 Pfam PF01597 Glycine cleavage H-protein 6 119 2.0E-38 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate PACID_12700 9cfb9fc03d76396a684a27192e733611 125 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 3 124 34.783 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PACID_12700 9cfb9fc03d76396a684a27192e733611 125 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 122 4.4E-42 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 PACID_12700 9cfb9fc03d76396a684a27192e733611 125 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PACID_12700 9cfb9fc03d76396a684a27192e733611 125 SUPERFAMILY SSF51230 3 123 2.62E-38 T 14-10-2018 IPR011053 Single hybrid motif PACID_21330 b323399448e66f20a9494e581a9828ec 226 Gene3D G3DSA:1.20.1300.10 1 224 1.7E-47 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_21330 b323399448e66f20a9494e581a9828ec 226 SUPERFAMILY SSF81343 2 225 1.06E-46 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_21330 b323399448e66f20a9494e581a9828ec 226 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 3 223 1.7E-51 T 14-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit PACID_17370 a1ede3a2334172e2ff09c9726afc5b09 239 Gene3D G3DSA:3.30.2010.10 138 231 4.8E-17 T 14-10-2018 PACID_17370 a1ede3a2334172e2ff09c9726afc5b09 239 Pfam PF01863 Protein of unknown function DUF45 27 230 6.6E-60 T 14-10-2018 IPR002725 Protein of unknown function DUF45 PACID_30590 7135257acc78be108b82005c22a26bb8 336 SUPERFAMILY SSF50129 5 165 1.52E-34 T 14-10-2018 IPR011032 GroES-like superfamily PACID_30590 7135257acc78be108b82005c22a26bb8 336 Gene3D G3DSA:3.90.180.10 21 325 2.3E-95 T 14-10-2018 PACID_30590 7135257acc78be108b82005c22a26bb8 336 SMART SM00829 11 333 7.4E-26 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_30590 7135257acc78be108b82005c22a26bb8 336 Pfam PF00107 Zinc-binding dehydrogenase 171 296 3.1E-26 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_30590 7135257acc78be108b82005c22a26bb8 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 129 1.0E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_30590 7135257acc78be108b82005c22a26bb8 336 SUPERFAMILY SSF51735 137 312 2.73E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30590 7135257acc78be108b82005c22a26bb8 336 Gene3D G3DSA:3.40.50.720 142 283 2.3E-95 T 14-10-2018 PACID_27240 3936d2f987bf8f15b638df63588485f4 493 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PACID_27240 3936d2f987bf8f15b638df63588485f4 493 PIRSF PIRSF006060 12 489 1.2E-73 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_27240 3936d2f987bf8f15b638df63588485f4 493 Gene3D G3DSA:1.20.1740.10 26 483 2.1E-58 T 14-10-2018 PACID_27240 3936d2f987bf8f15b638df63588485f4 493 Pfam PF00324 Amino acid permease 34 447 1.4E-97 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PACID_03950 5a909d50f37528f18c062225eae65418 661 Pfam PF13454 FAD-NAD(P)-binding 19 192 2.5E-23 T 14-10-2018 IPR038732 FAD-dependent urate hydroxylase HpyO, FAD/NAD(P)-binding domain PACID_03950 5a909d50f37528f18c062225eae65418 661 Gene3D G3DSA:3.50.50.60 16 198 2.5E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_03950 5a909d50f37528f18c062225eae65418 661 SUPERFAMILY SSF51905 51 249 4.88E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 Pfam PF01926 50S ribosome-binding GTPase 190 308 4.0E-22 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 Pfam PF01926 50S ribosome-binding GTPase 18 132 2.1E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 Gene3D G3DSA:3.40.50.300 14 173 2.2E-44 T 14-10-2018 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 16 442 2.2E-156 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 Hamap MF_00195 GTPase Der [der]. 15 445 34.823 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 189 355 9.7E-24 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 17 136 5.8E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 213 231 3.5E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 191 211 3.5E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 240 255 3.5E-9 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 PIRSF PIRSF006485 15 450 6.7E-159 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 Gene3D G3DSA:3.30.300.20 364 445 1.3E-22 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 SMART SM00382 187 330 0.59 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 SMART SM00382 14 152 0.061 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 SUPERFAMILY SSF52540 17 179 2.05E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 Gene3D G3DSA:3.40.50.300 188 359 7.4E-43 T 14-10-2018 PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 364 442 3.8E-22 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like PACID_17470 bf9c5929d6c30d3b866b261e57cfdbba 451 SUPERFAMILY SSF52540 150 446 1.37E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20450 eb9965e3eec51de734295c58f02e0545 319 Gene3D G3DSA:3.30.1330.10 6 147 6.3E-40 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PACID_20450 eb9965e3eec51de734295c58f02e0545 319 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 11 319 25.765 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PACID_20450 eb9965e3eec51de734295c58f02e0545 319 Pfam PF00586 AIR synthase related protein, N-terminal domain 36 145 1.9E-21 T 14-10-2018 IPR016188 PurM-like, N-terminal domain PACID_20450 eb9965e3eec51de734295c58f02e0545 319 Gene3D G3DSA:3.90.650.10 153 319 2.1E-41 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PACID_20450 eb9965e3eec51de734295c58f02e0545 319 SUPERFAMILY SSF55326 8 145 1.92E-31 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily PACID_20450 eb9965e3eec51de734295c58f02e0545 319 SUPERFAMILY SSF56042 151 297 4.01E-26 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily PACID_20450 eb9965e3eec51de734295c58f02e0545 319 PIRSF PIRSF005303 6 319 8.2E-81 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PACID_20450 eb9965e3eec51de734295c58f02e0545 319 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 12 319 1.4E-74 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 PACID_09940 5194841ba4682b452bdee9028e44ad67 322 Pfam PF14572 Phosphoribosyl synthetase-associated domain 213 322 1.3E-25 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PACID_09940 5194841ba4682b452bdee9028e44ad67 322 Gene3D G3DSA:3.40.50.2020 16 309 1.7E-114 T 14-10-2018 PACID_09940 5194841ba4682b452bdee9028e44ad67 322 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 13 128 4.3E-42 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PACID_09940 5194841ba4682b452bdee9028e44ad67 322 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 12 322 45.137 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 PACID_09940 5194841ba4682b452bdee9028e44ad67 322 SUPERFAMILY SSF53271 77 313 1.31E-61 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_09940 5194841ba4682b452bdee9028e44ad67 322 Gene3D G3DSA:3.40.50.2020 155 298 1.7E-114 T 14-10-2018 PACID_09940 5194841ba4682b452bdee9028e44ad67 322 SMART SM01400 12 128 2.5E-67 T 14-10-2018 PACID_09940 5194841ba4682b452bdee9028e44ad67 322 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 13 322 4.0E-117 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 PACID_09940 5194841ba4682b452bdee9028e44ad67 322 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 136 151 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 PACID_27400 74df22a7230ef07b397b232a24f88242 87 Pfam PF02583 Metal-sensitive transcriptional repressor 9 81 1.9E-21 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 PACID_27400 74df22a7230ef07b397b232a24f88242 87 Gene3D G3DSA:1.20.58.1000 4 86 1.5E-21 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily PACID_26560 57ed1502212ae449878697c4c4805e95 226 Pfam PF02734 DAK2 domain 51 222 3.5E-50 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_26560 57ed1502212ae449878697c4c4805e95 226 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 27 220 8.0E-68 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 PACID_26560 57ed1502212ae449878697c4c4805e95 226 Gene3D G3DSA:1.25.40.340 19 225 3.1E-63 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_26560 57ed1502212ae449878697c4c4805e95 226 SMART SM01120 50 223 1.0E-66 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_26560 57ed1502212ae449878697c4c4805e95 226 SUPERFAMILY SSF101473 16 222 9.02E-53 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_17610 22cc37e952c0024889edd4b84eefbfa9 109 SUPERFAMILY SSF50118 1 84 5.45E-19 T 14-10-2018 PACID_17610 22cc37e952c0024889edd4b84eefbfa9 109 Gene3D G3DSA:2.30.30.110 1 108 2.4E-24 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PACID_17610 22cc37e952c0024889edd4b84eefbfa9 109 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 100 5.7E-14 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 PACID_22990 9de27ac07177d4411fe09193ba117fb3 312 Gene3D G3DSA:3.40.1350.80 151 311 1.7E-62 T 14-10-2018 PACID_22990 9de27ac07177d4411fe09193ba117fb3 312 Gene3D G3DSA:1.10.10.1820 1 149 2.1E-55 T 14-10-2018 PACID_22990 9de27ac07177d4411fe09193ba117fb3 312 Pfam PF06616 BsuBI/PstI restriction endonuclease C-terminus 6 309 3.5E-122 T 14-10-2018 IPR009528 Restriction endonuclease, type II, BsuBI/PstI, C-terminal GO:0000287|GO:0003677|GO:0009036|GO:0009307 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 SUPERFAMILY SSF52540 59 403 1.33E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_22760 1a35b9d16568887d82485892fc63cf14 429 Pfam PF06689 ClpX C4-type zinc finger 12 48 5.3E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 320 397 2.4E-17 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PACID_22760 1a35b9d16568887d82485892fc63cf14 429 Gene3D G3DSA:1.10.8.60 319 426 3.6E-37 T 14-10-2018 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 418 51.216 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 8 411 1.9E-194 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 Pfam PF07724 AAA domain (Cdc48 subfamily) 118 314 1.1E-48 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 SMART SM00994 10 49 9.2E-22 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 Gene3D G3DSA:3.40.50.300 57 317 6.9E-103 T 14-10-2018 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 Gene3D G3DSA:3.30.50.30 2 50 3.0E-23 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily PACID_22760 1a35b9d16568887d82485892fc63cf14 429 SUPERFAMILY SSF57716 12 46 1.71E-11 T 14-10-2018 PACID_22760 1a35b9d16568887d82485892fc63cf14 429 SMART SM01086 320 412 7.6E-32 T 14-10-2018 IPR019489 Clp ATPase, C-terminal PACID_22760 1a35b9d16568887d82485892fc63cf14 429 SMART SM00382 117 274 6.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_09630 a1b94759f62fc03697eb3493c5edc71f 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 1.7E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09630 a1b94759f62fc03697eb3493c5edc71f 185 SUPERFAMILY SSF46689 8 79 4.99E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_09630 a1b94759f62fc03697eb3493c5edc71f 185 Gene3D G3DSA:1.10.357.10 3 181 2.0E-34 T 14-10-2018 PACID_09630 a1b94759f62fc03697eb3493c5edc71f 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09630 a1b94759f62fc03697eb3493c5edc71f 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 3.0E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09630 a1b94759f62fc03697eb3493c5edc71f 185 SUPERFAMILY SSF48498 88 177 7.56E-5 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_34120 e101d163c39a11fa696fdf9c784de13b 335 SUPERFAMILY SSF47413 5 63 1.46E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_34120 e101d163c39a11fa696fdf9c784de13b 335 Pfam PF13377 Periplasmic binding protein-like domain 172 328 9.0E-24 T 14-10-2018 PACID_34120 e101d163c39a11fa696fdf9c784de13b 335 SMART SM00354 5 75 1.2E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_34120 e101d163c39a11fa696fdf9c784de13b 335 Gene3D G3DSA:1.10.260.40 2 61 4.8E-20 T 14-10-2018 PACID_34120 e101d163c39a11fa696fdf9c784de13b 335 Gene3D G3DSA:3.40.50.2300 66 307 6.3E-50 T 14-10-2018 PACID_34120 e101d163c39a11fa696fdf9c784de13b 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 52 2.3E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_34120 e101d163c39a11fa696fdf9c784de13b 335 SUPERFAMILY SSF53822 63 322 1.37E-46 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_34120 e101d163c39a11fa696fdf9c784de13b 335 Gene3D G3DSA:3.40.50.2300 163 289 6.3E-50 T 14-10-2018 PACID_30650 c69ce06f43b9115f26b95f3376b50917 213 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 212 41.125 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PACID_30650 c69ce06f43b9115f26b95f3376b50917 213 SUPERFAMILY SSF53271 3 210 3.02E-61 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_30650 c69ce06f43b9115f26b95f3376b50917 213 Pfam PF14681 Uracil phosphoribosyltransferase 5 210 1.2E-61 T 14-10-2018 PACID_30650 c69ce06f43b9115f26b95f3376b50917 213 Gene3D G3DSA:3.40.50.2020 1 211 3.1E-73 T 14-10-2018 PACID_30650 c69ce06f43b9115f26b95f3376b50917 213 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 210 4.2E-73 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PACID_05960 4e4b39acd16c8a70d0f9c903629f226f 328 SMART SM00382 30 231 9.0E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_05960 4e4b39acd16c8a70d0f9c903629f226f 328 Pfam PF00005 ABC transporter 21 166 1.2E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_05960 4e4b39acd16c8a70d0f9c903629f226f 328 SUPERFAMILY SSF52540 6 225 4.34E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_05960 4e4b39acd16c8a70d0f9c903629f226f 328 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_05960 4e4b39acd16c8a70d0f9c903629f226f 328 Gene3D G3DSA:3.40.50.300 1 235 2.9E-54 T 14-10-2018 PACID_20990 3d841631f6e4fa7d61a141794efcb676 88 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 2 88 17.883 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 PACID_20990 3d841631f6e4fa7d61a141794efcb676 88 Gene3D G3DSA:1.10.287.1080 1 88 1.4E-21 T 14-10-2018 PACID_20990 3d841631f6e4fa7d61a141794efcb676 88 SUPERFAMILY SSF101386 3 88 4.14E-20 T 14-10-2018 PACID_20990 3d841631f6e4fa7d61a141794efcb676 88 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 6 88 3.5E-22 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 PACID_20990 3d841631f6e4fa7d61a141794efcb676 88 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 11 86 4.8E-8 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 PACID_17790 0f0008c6f85a02fea76c5222cb5c7fd9 148 SMART SM00732 5 104 3.1E-22 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 PACID_17790 0f0008c6f85a02fea76c5222cb5c7fd9 148 SUPERFAMILY SSF53098 5 138 4.7E-32 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_17790 0f0008c6f85a02fea76c5222cb5c7fd9 148 Pfam PF03652 Holliday junction resolvase 6 136 1.2E-38 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PACID_17790 0f0008c6f85a02fea76c5222cb5c7fd9 148 Gene3D G3DSA:3.30.420.140 6 147 5.3E-40 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 PACID_17790 0f0008c6f85a02fea76c5222cb5c7fd9 148 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 5 139 20.456 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PACID_17790 0f0008c6f85a02fea76c5222cb5c7fd9 148 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 9 136 2.9E-25 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 PACID_13940 a72bf8b47250730700ececcada61bfb1 630 Gene3D G3DSA:3.30.300.30 515 629 5.2E-28 T 14-10-2018 PACID_13940 a72bf8b47250730700ececcada61bfb1 630 SUPERFAMILY SSF56801 29 618 1.31E-177 T 14-10-2018 PACID_13940 a72bf8b47250730700ececcada61bfb1 630 Pfam PF00501 AMP-binding enzyme 87 520 1.2E-98 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PACID_13940 a72bf8b47250730700ececcada61bfb1 630 Pfam PF13193 AMP-binding enzyme C-terminal domain 528 606 2.1E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PACID_13940 a72bf8b47250730700ececcada61bfb1 630 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 30 78 2.0E-16 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 PACID_13940 a72bf8b47250730700ececcada61bfb1 630 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 23 629 1.3E-262 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 PACID_13940 a72bf8b47250730700ececcada61bfb1 630 Gene3D G3DSA:3.40.50.12780 54 512 2.5E-113 T 14-10-2018 PACID_13940 a72bf8b47250730700ececcada61bfb1 630 ProSitePatterns PS00455 Putative AMP-binding domain signature. 259 270 - T 14-10-2018 IPR020845 AMP-binding, conserved site PACID_15100 8d9f8e58a1635d62721c269714ae3f37 273 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 232 271 1.6E-16 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain PACID_15100 8d9f8e58a1635d62721c269714ae3f37 273 Gene3D G3DSA:3.40.50.80 118 226 1.5E-22 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PACID_15100 8d9f8e58a1635d62721c269714ae3f37 273 SUPERFAMILY SSF63380 13 112 2.2E-13 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PACID_15100 8d9f8e58a1635d62721c269714ae3f37 273 PIRSF PIRSF006816 10 273 3.9E-55 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 PACID_15100 8d9f8e58a1635d62721c269714ae3f37 273 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 11 273 32.528 T 14-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit PACID_15100 8d9f8e58a1635d62721c269714ae3f37 273 Gene3D G3DSA:2.40.30.10 10 110 1.1E-15 T 14-10-2018 PACID_15100 8d9f8e58a1635d62721c269714ae3f37 273 SUPERFAMILY SSF52343 119 272 1.01E-31 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PACID_15100 8d9f8e58a1635d62721c269714ae3f37 273 Gene3D G3DSA:2.10.240.10 232 273 1.2E-19 T 14-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily PACID_26320 a72e0c09f2da8dac859919c9ed549cda 275 Gene3D G3DSA:1.20.120.1200 10 178 2.3E-38 T 14-10-2018 PACID_26320 a72e0c09f2da8dac859919c9ed549cda 275 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 23 175 5.0E-31 T 14-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_31120 21b86a1bc2ea75524c468a7e67191461 379 Pfam PF00676 Dehydrogenase E1 component 51 327 3.1E-55 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PACID_31120 21b86a1bc2ea75524c468a7e67191461 379 SUPERFAMILY SSF52518 16 369 4.95E-82 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_31120 21b86a1bc2ea75524c468a7e67191461 379 Gene3D G3DSA:3.40.50.970 2 367 1.3E-94 T 14-10-2018 PACID_28730 e665096cbe2cff113a14da76e6e4f654 785 Pfam PF00144 Beta-lactamase 300 626 4.0E-46 T 14-10-2018 IPR001466 Beta-lactamase-related PACID_28730 e665096cbe2cff113a14da76e6e4f654 785 SUPERFAMILY SSF52317 20 207 9.94E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_28730 e665096cbe2cff113a14da76e6e4f654 785 Pfam PF00117 Glutamine amidotransferase class-I 60 199 3.3E-13 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_28730 e665096cbe2cff113a14da76e6e4f654 785 Gene3D G3DSA:3.40.710.10 294 636 1.5E-67 T 14-10-2018 PACID_28730 e665096cbe2cff113a14da76e6e4f654 785 SUPERFAMILY SSF56601 300 642 2.64E-57 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_28730 e665096cbe2cff113a14da76e6e4f654 785 Gene3D G3DSA:3.40.50.880 19 254 1.4E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_08920 38cc5bad83cb1b21b220d19a6e834b7f 204 Gene3D G3DSA:3.40.50.300 4 204 8.4E-59 T 14-10-2018 PACID_08920 38cc5bad83cb1b21b220d19a6e834b7f 204 SUPERFAMILY SSF52540 16 204 2.86E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_08920 38cc5bad83cb1b21b220d19a6e834b7f 204 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 19 204 3.8E-68 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PACID_08920 38cc5bad83cb1b21b220d19a6e834b7f 204 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 24 204 2.8E-56 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PACID_08920 38cc5bad83cb1b21b220d19a6e834b7f 204 PIRSF PIRSF015617 1 204 9.6E-60 T 14-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 PACID_22480 fa4e741bd7c1edfc34ac94a65658fd36 255 Gene3D G3DSA:3.40.50.300 1 250 4.5E-50 T 14-10-2018 PACID_22480 fa4e741bd7c1edfc34ac94a65658fd36 255 SUPERFAMILY SSF52540 4 234 2.18E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_22480 fa4e741bd7c1edfc34ac94a65658fd36 255 Pfam PF00005 ABC transporter 23 174 3.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_22480 fa4e741bd7c1edfc34ac94a65658fd36 255 SMART SM00382 32 226 6.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_22480 fa4e741bd7c1edfc34ac94a65658fd36 255 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 4 246 4.2E-96 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 PACID_17870 1105a773dce56012433445272502bf9f 603 Gene3D G3DSA:3.30.930.10 118 583 4.7E-180 T 14-10-2018 PACID_17870 1105a773dce56012433445272502bf9f 603 Gene3D G3DSA:3.30.1360.30 273 412 4.7E-180 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 PACID_17870 1105a773dce56012433445272502bf9f 603 SUPERFAMILY SSF55681 120 560 1.13E-99 T 14-10-2018 PACID_17870 1105a773dce56012433445272502bf9f 603 PRINTS PR01042 Aspartyl-tRNA synthetase signature 209 222 1.5E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_17870 1105a773dce56012433445272502bf9f 603 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 1.5E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_17870 1105a773dce56012433445272502bf9f 603 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 1.5E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_17870 1105a773dce56012433445272502bf9f 603 PRINTS PR01042 Aspartyl-tRNA synthetase signature 192 204 1.5E-25 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_17870 1105a773dce56012433445272502bf9f 603 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 587 32.117 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 PACID_17870 1105a773dce56012433445272502bf9f 603 SUPERFAMILY SSF55261 290 411 7.19E-34 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 PACID_17870 1105a773dce56012433445272502bf9f 603 Gene3D G3DSA:2.40.50.140 1 105 1.0E-32 T 14-10-2018 PACID_17870 1105a773dce56012433445272502bf9f 603 SUPERFAMILY SSF50249 2 105 1.76E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_17870 1105a773dce56012433445272502bf9f 603 Pfam PF02938 GAD domain 313 393 5.6E-16 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 PACID_17870 1105a773dce56012433445272502bf9f 603 Pfam PF01336 OB-fold nucleic acid binding domain 19 102 2.7E-13 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PACID_17870 1105a773dce56012433445272502bf9f 603 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 585 8.4E-209 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 PACID_17870 1105a773dce56012433445272502bf9f 603 Pfam PF00152 tRNA synthetases class II (D, K and N) 120 560 5.7E-99 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_12730 d40a54041c56d245c20e2c0b5853f3d9 756 Gene3D G3DSA:3.10.620.30 420 565 4.9E-19 T 14-10-2018 PACID_12730 d40a54041c56d245c20e2c0b5853f3d9 756 SMART SM00460 485 554 2.1E-15 T 14-10-2018 IPR002931 Transglutaminase-like PACID_12730 d40a54041c56d245c20e2c0b5853f3d9 756 SUPERFAMILY SSF54001 426 559 4.07E-30 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PACID_12730 d40a54041c56d245c20e2c0b5853f3d9 756 Pfam PF01841 Transglutaminase-like superfamily 438 552 2.2E-26 T 14-10-2018 IPR002931 Transglutaminase-like PACID_30070 4087b7ecf0b476dabca7e81e45403875 289 Pfam PF02673 Bacitracin resistance protein BacA 6 277 1.6E-78 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PACID_30070 4087b7ecf0b476dabca7e81e45403875 289 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 275 4.2E-68 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PACID_30070 4087b7ecf0b476dabca7e81e45403875 289 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 282 17.445 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PACID_20340 7a1a9902cf0eb377febddb457e7641e9 388 Pfam PF01960 ArgJ family 11 388 1.0E-124 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PACID_20340 7a1a9902cf0eb377febddb457e7641e9 388 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 22 386 6.0E-93 T 14-10-2018 PACID_20340 7a1a9902cf0eb377febddb457e7641e9 388 Gene3D G3DSA:3.60.70.12 1 260 2.0E-86 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PACID_20340 7a1a9902cf0eb377febddb457e7641e9 388 Gene3D G3DSA:3.10.20.340 261 388 8.4E-38 T 14-10-2018 PACID_20340 7a1a9902cf0eb377febddb457e7641e9 388 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 2 388 1.3E-110 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PACID_20340 7a1a9902cf0eb377febddb457e7641e9 388 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 388 124.679 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PACID_20340 7a1a9902cf0eb377febddb457e7641e9 388 SUPERFAMILY SSF56266 5 384 3.66E-120 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 PACID_14670 bbd3d6e5aa22dc55ba5091348508e38f 119 Pfam PF16259 Domain of unknown function (DUF4913) 21 107 1.8E-31 T 14-10-2018 IPR032584 Protein of unknown function DUF4913 PACID_30370 595746a55a26198c2e21586086c19f9d 224 Gene3D G3DSA:2.40.40.10 134 223 9.4E-35 T 14-10-2018 IPR036908 RlpA-like domain superfamily PACID_30370 595746a55a26198c2e21586086c19f9d 224 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 138 223 3.5E-30 T 14-10-2018 IPR012997 Rare lipoprotein A PACID_30370 595746a55a26198c2e21586086c19f9d 224 SUPERFAMILY SSF50685 144 223 6.63E-16 T 14-10-2018 IPR036908 RlpA-like domain superfamily PACID_30370 595746a55a26198c2e21586086c19f9d 224 Pfam PF03330 Lytic transglycolase 137 220 1.5E-24 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain PACID_30370 595746a55a26198c2e21586086c19f9d 224 Gene3D G3DSA:2.30.30.40 54 121 9.2E-8 T 14-10-2018 PACID_30370 595746a55a26198c2e21586086c19f9d 224 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 18 223 20.081 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 PACID_23150 f851ebc615bd76df3689fe7aef248f93 174 Pfam PF13302 Acetyltransferase (GNAT) domain 14 153 2.1E-20 T 14-10-2018 IPR000182 GNAT domain PACID_23150 f851ebc615bd76df3689fe7aef248f93 174 Gene3D G3DSA:3.40.630.30 3 163 4.8E-30 T 14-10-2018 PACID_23150 f851ebc615bd76df3689fe7aef248f93 174 SUPERFAMILY SSF55729 6 158 1.6E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_10650 89ab01f62d7a18dd6a0b0d1d015b3af3 115 Gene3D G3DSA:3.10.450.40 14 113 3.2E-22 T 14-10-2018 PACID_10650 89ab01f62d7a18dd6a0b0d1d015b3af3 115 Pfam PF11523 Protein of unknown function (DUF3223) 36 107 2.6E-17 T 14-10-2018 PACID_27350 3d2091f6557b5be050a73507aef9b2e8 83 SUPERFAMILY SSF47757 3 63 1.44E-5 T 14-10-2018 PACID_27350 3d2091f6557b5be050a73507aef9b2e8 83 Pfam PF07704 Rv0623-like transcription factor 1 82 1.3E-26 T 14-10-2018 IPR011660 Antitoxin VapB-like PACID_32110 4221b85d308edd361decc2234fe6cc33 685 SUPERFAMILY SSF48208 79 454 5.92E-37 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_32110 4221b85d308edd361decc2234fe6cc33 685 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 12 593 1.0E-166 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 PACID_11140 4a79322f98c23c9c6f0bdbcadd391aa3 167 Pfam PF08534 Redoxin 20 161 7.5E-22 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 PACID_11140 4a79322f98c23c9c6f0bdbcadd391aa3 167 Hamap MF_00269 Thiol peroxidase [tpx]. 3 165 37.353 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 PACID_11140 4a79322f98c23c9c6f0bdbcadd391aa3 167 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 PACID_11140 4a79322f98c23c9c6f0bdbcadd391aa3 167 Gene3D G3DSA:3.40.30.10 2 166 1.4E-39 T 14-10-2018 PACID_11140 4a79322f98c23c9c6f0bdbcadd391aa3 167 SUPERFAMILY SSF52833 1 162 8.05E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_22220 a35223116e2ceeacbe20a74cc7d5dccc 331 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 13 322 3.7E-85 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter PACID_22220 a35223116e2ceeacbe20a74cc7d5dccc 331 PIRSF PIRSF026166 4 331 1.2E-117 T 14-10-2018 IPR016833 Putative sodium bile acid cotransporter PACID_22220 a35223116e2ceeacbe20a74cc7d5dccc 331 Gene3D G3DSA:1.20.1530.20 7 323 1.0E-32 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily PACID_02490 a3d9d3fd26354ff8e969f8436b2b68b2 357 SUPERFAMILY SSF47616 161 284 2.92E-20 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PACID_02490 a3d9d3fd26354ff8e969f8436b2b68b2 357 Pfam PF13410 Glutathione S-transferase, C-terminal domain 200 272 6.0E-8 T 14-10-2018 PACID_02490 a3d9d3fd26354ff8e969f8436b2b68b2 357 Pfam PF13409 Glutathione S-transferase, N-terminal domain 59 146 2.8E-8 T 14-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 PACID_02490 a3d9d3fd26354ff8e969f8436b2b68b2 357 Gene3D G3DSA:3.40.30.130 10 173 3.5E-49 T 14-10-2018 PACID_02490 a3d9d3fd26354ff8e969f8436b2b68b2 357 Gene3D G3DSA:1.20.1050.10 174 345 1.4E-31 T 14-10-2018 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Pfam PF00623 RNA polymerase Rpb1, domain 2 419 560 2.0E-36 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1258 17.478 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Pfam PF04983 RNA polymerase Rpb1, domain 3 564 718 1.8E-17 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Gene3D G3DSA:1.10.132.30 715 849 1.5E-53 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Gene3D G3DSA:1.10.274.100 565 632 5.4E-20 T 14-10-2018 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Gene3D G3DSA:1.10.274.100 633 714 9.7E-13 T 14-10-2018 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Gene3D G3DSA:2.40.50.100 1024 1096 1.9E-61 T 14-10-2018 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Gene3D G3DSA:1.10.40.90 449 491 1.0E-22 T 14-10-2018 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 SUPERFAMILY SSF64484 6 1248 0.0 T 14-10-2018 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 SMART SM00663 310 589 3.8E-174 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Gene3D G3DSA:1.10.150.390 1197 1260 6.9E-29 T 14-10-2018 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Gene3D G3DSA:1.10.1790.20 1008 1195 1.9E-61 T 14-10-2018 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Pfam PF04998 RNA polymerase Rpb1, domain 5 825 1196 4.0E-63 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Pfam PF05000 RNA polymerase Rpb1, domain 4 750 813 1.3E-12 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1248 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25910 3531895fae2dbab9173e503efb2d3d60 1292 Pfam PF04997 RNA polymerase Rpb1, domain 1 9 417 5.2E-82 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_05120 228295c4f27bc22f22d04dbcc418bcf2 185 ProSitePatterns PS01047 Heavy-metal-associated domain. 7 36 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 PACID_05120 228295c4f27bc22f22d04dbcc418bcf2 185 Gene3D G3DSA:3.30.70.100 2 71 1.9E-18 T 14-10-2018 PACID_05120 228295c4f27bc22f22d04dbcc418bcf2 185 SUPERFAMILY SSF55008 3 62 6.02E-16 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PACID_05120 228295c4f27bc22f22d04dbcc418bcf2 185 Pfam PF00403 Heavy-metal-associated domain 4 62 2.9E-15 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PACID_03660 29039450619db493122eb3e94ed42842 435 Gene3D G3DSA:2.60.120.10 339 421 1.4E-119 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_03660 29039450619db493122eb3e94ed42842 435 PIRSF PIRSF001480 8 430 3.1E-82 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 Pfam PF01238 Phosphomannose isomerase type I 11 393 2.9E-59 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 PRINTS PR00714 Phosphomannose isomerase type I signature 101 122 1.2E-41 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 PRINTS PR00714 Phosphomannose isomerase type I signature 146 169 1.2E-41 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 PRINTS PR00714 Phosphomannose isomerase type I signature 258 273 1.2E-41 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 1.2E-41 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 PRINTS PR00714 Phosphomannose isomerase type I signature 312 331 1.2E-41 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 PRINTS PR00714 Phosphomannose isomerase type I signature 293 312 1.2E-41 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 PRINTS PR00714 Phosphomannose isomerase type I signature 13 31 1.2E-41 T 14-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_03660 29039450619db493122eb3e94ed42842 435 Gene3D G3DSA:2.60.120.10 15 313 1.4E-119 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_03660 29039450619db493122eb3e94ed42842 435 SUPERFAMILY SSF51182 9 416 9.12E-75 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PACID_03660 29039450619db493122eb3e94ed42842 435 Gene3D G3DSA:1.10.441.10 171 338 1.4E-119 T 14-10-2018 PACID_03660 29039450619db493122eb3e94ed42842 435 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 15 422 2.7E-55 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 PACID_05480 f8b4364107dbc487b35cbd18456205ef 283 SUPERFAMILY SSF46689 9 76 2.72E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_05480 f8b4364107dbc487b35cbd18456205ef 283 Gene3D G3DSA:1.10.357.10 1 217 1.9E-10 T 14-10-2018 PACID_19090 f6c1c741081c875389367a51565c02ac 378 SUPERFAMILY SSF53383 10 371 3.89E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_19090 f6c1c741081c875389367a51565c02ac 378 PIRSF PIRSF005572 8 378 1.1E-98 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 PACID_19090 f6c1c741081c875389367a51565c02ac 378 Gene3D G3DSA:3.90.1150.10 12 364 1.0E-109 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_19090 f6c1c741081c875389367a51565c02ac 378 Pfam PF00266 Aminotransferase class-V 11 363 1.1E-55 T 14-10-2018 IPR000192 Aminotransferase class V domain PACID_19090 f6c1c741081c875389367a51565c02ac 378 Gene3D G3DSA:3.40.640.10 22 255 1.0E-109 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_08660 7e69dc7ad51ece7de51db02226b1c440 398 SUPERFAMILY SSF53383 8 396 6.19E-113 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_08660 7e69dc7ad51ece7de51db02226b1c440 398 Gene3D G3DSA:3.90.1150.10 39 390 2.0E-128 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_08660 7e69dc7ad51ece7de51db02226b1c440 398 Pfam PF00155 Aminotransferase class I and II 43 389 2.1E-68 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_08660 7e69dc7ad51ece7de51db02226b1c440 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 6 393 1.1E-179 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 PACID_08660 7e69dc7ad51ece7de51db02226b1c440 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 244 253 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 PACID_08660 7e69dc7ad51ece7de51db02226b1c440 398 Gene3D G3DSA:3.40.640.10 58 299 2.0E-128 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_08660 7e69dc7ad51ece7de51db02226b1c440 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 398 51.107 T 14-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 PACID_21690 5e2ffd2b351a6393b6167de0ec28af4e 87 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 1 87 21.234 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21690 5e2ffd2b351a6393b6167de0ec28af4e 87 Pfam PF00312 Ribosomal protein S15 6 86 3.3E-35 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_21690 5e2ffd2b351a6393b6167de0ec28af4e 87 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 8 86 3.0E-35 T 14-10-2018 PACID_21690 5e2ffd2b351a6393b6167de0ec28af4e 87 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 87 2.0E-36 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21690 5e2ffd2b351a6393b6167de0ec28af4e 87 ProSitePatterns PS00362 Ribosomal protein S15 signature. 37 67 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_21690 5e2ffd2b351a6393b6167de0ec28af4e 87 SMART SM01387 6 86 1.9E-49 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_21690 5e2ffd2b351a6393b6167de0ec28af4e 87 Gene3D G3DSA:1.10.287.10 1 87 2.4E-32 T 14-10-2018 PACID_21690 5e2ffd2b351a6393b6167de0ec28af4e 87 SUPERFAMILY SSF47060 3 87 3.24E-33 T 14-10-2018 IPR009068 S15/NS1, RNA-binding PACID_19890 7053144f51a149768f9444c370b22b92 396 Gene3D G3DSA:3.40.50.720 99 287 1.6E-95 T 14-10-2018 PACID_19890 7053144f51a149768f9444c370b22b92 396 SUPERFAMILY SSF52283 1 128 3.61E-34 T 14-10-2018 PACID_19890 7053144f51a149768f9444c370b22b92 396 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 144 171 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PACID_19890 7053144f51a149768f9444c370b22b92 396 Gene3D G3DSA:3.40.50.720 4 302 1.6E-95 T 14-10-2018 PACID_19890 7053144f51a149768f9444c370b22b92 396 Gene3D G3DSA:3.30.70.260 316 396 9.5E-19 T 14-10-2018 PACID_19890 7053144f51a149768f9444c370b22b92 396 SUPERFAMILY SSF51735 98 285 9.81E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_19890 7053144f51a149768f9444c370b22b92 396 SUPERFAMILY SSF55021 322 396 2.29E-10 T 14-10-2018 PACID_19890 7053144f51a149768f9444c370b22b92 396 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 284 7.0E-49 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PACID_19890 7053144f51a149768f9444c370b22b92 396 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 316 8.4E-27 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PACID_24120 7cc723c47e716ff38a86e85d26155480 412 Gene3D G3DSA:1.10.260.150 133 412 4.8E-66 T 14-10-2018 PACID_24120 7cc723c47e716ff38a86e85d26155480 412 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 174 316 8.0E-43 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain PACID_24120 7cc723c47e716ff38a86e85d26155480 412 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 174 316 4.3E-38 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain PACID_24130 cac573aaa693f76744d4fc40d4942dcc 196 Pfam PF00731 AIR carboxylase 35 180 1.5E-65 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PACID_24130 cac573aaa693f76744d4fc40d4942dcc 196 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 36 183 2.0E-63 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PACID_24130 cac573aaa693f76744d4fc40d4942dcc 196 SMART SM01001 34 183 2.0E-96 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 PACID_24130 cac573aaa693f76744d4fc40d4942dcc 196 PIRSF PIRSF001338 31 194 9.0E-68 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 PACID_24130 cac573aaa693f76744d4fc40d4942dcc 196 Gene3D G3DSA:3.40.50.7700 29 196 5.5E-73 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 PACID_24130 cac573aaa693f76744d4fc40d4942dcc 196 SUPERFAMILY SSF52255 35 192 6.54E-65 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 PACID_24130 cac573aaa693f76744d4fc40d4942dcc 196 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 36 187 32.802 T 14-10-2018 IPR033747 Class I PurE PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 Gene3D G3DSA:3.40.50.300 288 438 1.5E-24 T 14-10-2018 PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 Pfam PF08494 DEAD/H associated 680 867 1.0E-68 T 14-10-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 SUPERFAMILY SSF52540 37 429 2.51E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 SMART SM00487 19 234 3.2E-33 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 SMART SM00382 36 410 0.003 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 Pfam PF00271 Helicase conserved C-terminal domain 299 423 6.0E-14 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 Pfam PF00270 DEAD/DEAH box helicase 24 205 4.1E-24 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 Gene3D G3DSA:3.40.50.300 6 223 3.7E-57 T 14-10-2018 PACID_17650 51e3ca67ca1a532e65f3f181f9116dcb 1535 SMART SM00490 313 427 1.7E-15 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_02160 e5ee546d7f101b0a0ee662417c49651b 539 Gene3D G3DSA:3.90.226.10 284 539 1.0E-83 T 14-10-2018 PACID_02160 e5ee546d7f101b0a0ee662417c49651b 539 SUPERFAMILY SSF52096 266 538 2.85E-80 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_02160 e5ee546d7f101b0a0ee662417c49651b 539 Gene3D G3DSA:3.90.226.10 25 281 5.7E-92 T 14-10-2018 PACID_02160 e5ee546d7f101b0a0ee662417c49651b 539 Pfam PF01039 Carboxyl transferase domain 51 536 1.7E-174 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PACID_02160 e5ee546d7f101b0a0ee662417c49651b 539 SUPERFAMILY SSF52096 29 279 1.81E-76 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_01460 e62b863f67f03f61ac307b6865470efe 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 172 199 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 SUPERFAMILY SSF52172 4 136 1.71E-36 T 14-10-2018 IPR011006 CheY-like superfamily PACID_01460 e62b863f67f03f61ac307b6865470efe 219 Pfam PF00072 Response regulator receiver domain 7 119 7.8E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 SMART SM00448 5 118 6.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 SUPERFAMILY SSF46894 140 218 2.38E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 188 200 4.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 172 4.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 188 4.7E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 SMART SM00421 155 212 1.8E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 157 212 2.1E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_01460 e62b863f67f03f61ac307b6865470efe 219 Gene3D G3DSA:3.40.50.12740 5 218 3.9E-70 T 14-10-2018 PACID_16290 4cab841ad49638bfaf034ab97a43a9bb 225 Gene3D G3DSA:3.40.50.720 2 138 2.1E-32 T 14-10-2018 PACID_16290 4cab841ad49638bfaf034ab97a43a9bb 225 Pfam PF02254 TrkA-N domain 8 121 5.8E-26 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PACID_16290 4cab841ad49638bfaf034ab97a43a9bb 225 SUPERFAMILY SSF51735 7 142 1.26E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_16290 4cab841ad49638bfaf034ab97a43a9bb 225 Gene3D G3DSA:3.30.70.1450 147 221 8.3E-6 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 9 335 3.0E-87 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 Gene3D G3DSA:3.20.20.120 118 349 2.0E-122 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 SUPERFAMILY SSF51604 114 363 2.75E-57 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 SMART SM00922 143 237 8.2E-20 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 SUPERFAMILY SSF54826 1 126 1.85E-30 T 14-10-2018 PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 367 37.867 T 14-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 Pfam PF13378 Enolase C-terminal domain-like 146 357 1.1E-40 T 14-10-2018 IPR029065 Enolase C-terminal domain-like PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 125 1.3E-7 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain PACID_03070 b8a71ffbc60fe1304a3afafe4a52ff1a 375 Gene3D G3DSA:3.30.390.10 12 357 2.0E-122 T 14-10-2018 IPR029017 Enolase-like, N-terminal PACID_04250 8bcef149937aa2e59720f56063db8907 446 Gene3D G3DSA:3.40.630.10 6 201 2.5E-40 T 14-10-2018 PACID_04250 8bcef149937aa2e59720f56063db8907 446 SUPERFAMILY SSF55031 200 342 6.58E-13 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PACID_04250 8bcef149937aa2e59720f56063db8907 446 SUPERFAMILY SSF53187 8 443 1.12E-43 T 14-10-2018 PACID_04250 8bcef149937aa2e59720f56063db8907 446 Pfam PF01546 Peptidase family M20/M25/M40 81 441 1.2E-31 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PACID_04250 8bcef149937aa2e59720f56063db8907 446 Pfam PF07687 Peptidase dimerisation domain 195 339 6.7E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_06590 2cc6ca53db135037d171f3909cd7e5c4 453 Gene3D G3DSA:1.20.1250.20 11 427 5.8E-60 T 14-10-2018 PACID_06590 2cc6ca53db135037d171f3909cd7e5c4 453 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_06590 2cc6ca53db135037d171f3909cd7e5c4 453 SUPERFAMILY SSF103473 8 419 9.55E-56 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_06590 2cc6ca53db135037d171f3909cd7e5c4 453 Pfam PF07690 Major Facilitator Superfamily 31 370 1.3E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 SUPERFAMILY SSF69705 2 99 3.27E-28 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 Gene3D G3DSA:2.40.50.140 105 176 9.3E-26 T 14-10-2018 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 SUPERFAMILY SSF50249 110 177 7.29E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 SUPERFAMILY SSF54814 178 256 1.7E-27 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 Gene3D G3DSA:3.30.300.20 177 255 2.9E-31 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 Pfam PF13184 NusA-like KH domain 208 275 2.3E-26 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 Gene3D G3DSA:3.30.300.20 256 325 2.6E-26 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 Pfam PF08529 NusA N-terminal domain 6 58 1.0E-7 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 Pfam PF08529 NusA N-terminal domain 66 100 1.1E-6 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 Gene3D G3DSA:3.30.1480.10 1 99 4.5E-32 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 SUPERFAMILY SSF54814 257 320 4.32E-15 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 1 325 25.35 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 PACID_21850 ae6d6cce3a128aabeecf269bc0fbeec5 325 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 76 319 8.5E-98 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 PACID_28860 6533e69976f58f08bae254902baf9102 238 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 193 1.1E-46 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PACID_28860 6533e69976f58f08bae254902baf9102 238 SUPERFAMILY SSF52540 1 195 1.24E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28860 6533e69976f58f08bae254902baf9102 238 Pfam PF02223 Thymidylate kinase 9 192 1.0E-42 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 PACID_28860 6533e69976f58f08bae254902baf9102 238 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PACID_28860 6533e69976f58f08bae254902baf9102 238 Hamap MF_00165 Thymidylate kinase [tmk]. 5 203 28.183 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PACID_28860 6533e69976f58f08bae254902baf9102 238 Gene3D G3DSA:3.40.50.300 1 204 6.8E-63 T 14-10-2018 PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 Gene3D G3DSA:3.90.1570.50 101 259 8.6E-18 T 14-10-2018 PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 17 713 8.3E-144 T 14-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 SUPERFAMILY SSF52540 218 479 4.48E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 Gene3D G3DSA:3.40.50.300 457 716 1.6E-36 T 14-10-2018 PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 12 212 5.5E-29 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 Pfam PF11867 Domain of unknown function (DUF3387) 745 1039 1.5E-33 T 14-10-2018 IPR021810 Protein of unknown function DUF3387 PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 Gene3D G3DSA:3.40.50.300 267 456 1.5E-48 T 14-10-2018 PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 Pfam PF04851 Type III restriction enzyme, res subunit 278 436 2.7E-16 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 SMART SM00487 263 475 6.7E-9 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_10570 16fd288eb5284bd7a7aa308e4cd2dad9 1110 SUPERFAMILY SSF52540 402 685 3.51E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09890 2558da2891d2388311525facdc9cddb3 303 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 1 282 29.138 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PACID_09890 2558da2891d2388311525facdc9cddb3 303 PIRSF PIRSF010376 1 295 1.4E-68 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PACID_09890 2558da2891d2388311525facdc9cddb3 303 Gene3D G3DSA:3.30.70.890 162 299 1.7E-34 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_09890 2558da2891d2388311525facdc9cddb3 303 Gene3D G3DSA:3.30.230.10 1 161 3.6E-54 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_09890 2558da2891d2388311525facdc9cddb3 303 SUPERFAMILY SSF54211 1 159 1.67E-37 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_09890 2558da2891d2388311525facdc9cddb3 303 SUPERFAMILY SSF55060 166 275 4.32E-19 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_09890 2558da2891d2388311525facdc9cddb3 303 Pfam PF08544 GHMP kinases C terminal 201 269 2.9E-6 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain PACID_09890 2558da2891d2388311525facdc9cddb3 303 Pfam PF00288 GHMP kinases N terminal domain 88 135 1.7E-4 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PACID_09890 2558da2891d2388311525facdc9cddb3 303 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 270 2.3E-48 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 PACID_26960 ea69f5b4886bdbe696cca40934e77ef3 501 Gene3D G3DSA:2.30.30.40 167 232 1.6E-9 T 14-10-2018 PACID_26960 ea69f5b4886bdbe696cca40934e77ef3 501 Pfam PF08239 Bacterial SH3 domain 306 357 4.5E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_26960 ea69f5b4886bdbe696cca40934e77ef3 501 Pfam PF08239 Bacterial SH3 domain 176 225 2.4E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_26960 ea69f5b4886bdbe696cca40934e77ef3 501 Gene3D G3DSA:2.30.30.40 297 357 6.3E-14 T 14-10-2018 PACID_26960 ea69f5b4886bdbe696cca40934e77ef3 501 SMART SM00287 166 229 3.7E-4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_26960 ea69f5b4886bdbe696cca40934e77ef3 501 SMART SM00287 297 360 9.5E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_26770 44c3ed1bd8b137df6f1ca98d03bcd7e6 209 Gene3D G3DSA:3.40.50.720 1 207 1.2E-40 T 14-10-2018 PACID_26770 44c3ed1bd8b137df6f1ca98d03bcd7e6 209 Pfam PF13460 NAD(P)H-binding 7 193 7.6E-42 T 14-10-2018 IPR016040 NAD(P)-binding domain PACID_26770 44c3ed1bd8b137df6f1ca98d03bcd7e6 209 SUPERFAMILY SSF51735 1 205 2.06E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 998 16.884 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 SUPERFAMILY SSF52156 778 907 5.62E-35 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 496 655 4.8E-31 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 SUPERFAMILY SSF50447 670 754 2.5E-23 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Pfam PF11987 Translation-initiation factor 2 785 890 6.8E-34 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Gene3D G3DSA:2.40.30.10 670 789 2.5E-40 T 14-10-2018 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 408 997 1.9E-235 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Gene3D G3DSA:2.40.30.10 902 999 3.3E-32 T 14-10-2018 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 414 460 1.4E-6 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 2 50 9.1E-12 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 SUPERFAMILY SSF52540 490 660 1.25E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Pfam PF00009 Elongation factor Tu GTP binding domain 498 658 1.1E-34 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Gene3D G3DSA:3.40.50.10050 793 901 2.8E-34 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Gene3D G3DSA:1.10.10.2480 1 64 2.9E-15 T 14-10-2018 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 SUPERFAMILY SSF50447 901 998 4.57E-30 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 PRINTS PR00315 GTP-binding elongation factor signature 497 510 9.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 PRINTS PR00315 GTP-binding elongation factor signature 601 610 9.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 PRINTS PR00315 GTP-binding elongation factor signature 549 559 9.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 PRINTS PR00315 GTP-binding elongation factor signature 565 576 9.3E-10 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_21830 3f10275fcfa8df0ded6e9c0802396a02 999 Gene3D G3DSA:3.40.50.300 490 669 5.3E-71 T 14-10-2018 PACID_21950 a018995881164ec4378997603d9d2db8 684 SUPERFAMILY SSF49503 534 664 2.86E-17 T 14-10-2018 IPR008972 Cupredoxin PACID_21950 a018995881164ec4378997603d9d2db8 684 Gene3D G3DSA:2.60.40.420 470 684 1.4E-50 T 14-10-2018 IPR008972 Cupredoxin PACID_21950 a018995881164ec4378997603d9d2db8 684 Pfam PF07732 Multicopper oxidase 158 230 2.5E-7 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 PACID_21950 a018995881164ec4378997603d9d2db8 684 SUPERFAMILY SSF49503 238 402 3.07E-11 T 14-10-2018 IPR008972 Cupredoxin PACID_21950 a018995881164ec4378997603d9d2db8 684 Gene3D G3DSA:2.60.40.420 229 451 1.6E-45 T 14-10-2018 IPR008972 Cupredoxin PACID_21950 a018995881164ec4378997603d9d2db8 684 SUPERFAMILY SSF49503 57 230 2.24E-17 T 14-10-2018 IPR008972 Cupredoxin PACID_21950 a018995881164ec4378997603d9d2db8 684 Pfam PF07731 Multicopper oxidase 535 666 7.9E-18 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PACID_21950 a018995881164ec4378997603d9d2db8 684 Gene3D G3DSA:2.60.40.420 23 228 1.3E-45 T 14-10-2018 IPR008972 Cupredoxin PACID_14070 d0c255f2bc6d97cc07acc9fe483a497c 411 Gene3D G3DSA:2.40.10.10 220 286 2.7E-10 T 14-10-2018 PACID_14070 d0c255f2bc6d97cc07acc9fe483a497c 411 Gene3D G3DSA:2.40.10.10 287 385 2.7E-10 T 14-10-2018 PACID_14070 d0c255f2bc6d97cc07acc9fe483a497c 411 SUPERFAMILY SSF50494 208 385 1.06E-5 T 14-10-2018 IPR009003 Peptidase S1, PA clan PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 SUPERFAMILY SSF50447 254 350 4.71E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 Gene3D G3DSA:3.40.50.300 37 248 8.8E-59 T 14-10-2018 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 SUPERFAMILY SSF52540 40 246 2.84E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 95 110 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 Gene3D G3DSA:2.40.30.10 253 347 2.6E-22 T 14-10-2018 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 SUPERFAMILY SSF50465 353 454 1.92E-26 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 Pfam PF00009 Elongation factor Tu GTP binding domain 43 223 2.4E-35 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 42 453 6.8E-157 T 14-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 Gene3D G3DSA:2.40.30.10 350 453 1.7E-28 T 14-10-2018 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 PRINTS PR00315 GTP-binding elongation factor signature 138 149 9.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 PRINTS PR00315 GTP-binding elongation factor signature 102 110 9.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 PRINTS PR00315 GTP-binding elongation factor signature 43 56 9.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 PRINTS PR00315 GTP-binding elongation factor signature 122 132 9.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_01730 dddb2870aa5c1ddcc35af0c557a39b5c 471 PRINTS PR00315 GTP-binding elongation factor signature 175 184 9.6E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_34050 ee38576c46b746ce41234e776f10528d 396 SUPERFAMILY SSF51735 3 150 9.8E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_34050 ee38576c46b746ce41234e776f10528d 396 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 120 7.3E-18 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_34050 ee38576c46b746ce41234e776f10528d 396 SUPERFAMILY SSF55347 133 307 4.41E-26 T 14-10-2018 PACID_34050 ee38576c46b746ce41234e776f10528d 396 Gene3D G3DSA:3.30.360.10 134 377 8.1E-35 T 14-10-2018 PACID_34050 ee38576c46b746ce41234e776f10528d 396 Gene3D G3DSA:3.40.50.720 2 133 7.3E-28 T 14-10-2018 PACID_05440 9c4063fa6ed6c14e2a241fa696cdd40c 688 Pfam PF00005 ABC transporter 457 605 1.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_05440 9c4063fa6ed6c14e2a241fa696cdd40c 688 Gene3D G3DSA:1.20.1560.10 134 428 1.0E-86 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_05440 9c4063fa6ed6c14e2a241fa696cdd40c 688 SMART SM00382 465 657 1.4E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_05440 9c4063fa6ed6c14e2a241fa696cdd40c 688 SUPERFAMILY SSF90123 60 424 5.1E-80 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 PACID_05440 9c4063fa6ed6c14e2a241fa696cdd40c 688 SUPERFAMILY SSF52540 434 676 1.38E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_05440 9c4063fa6ed6c14e2a241fa696cdd40c 688 ProSitePatterns PS00211 ABC transporters family signature. 577 591 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_05440 9c4063fa6ed6c14e2a241fa696cdd40c 688 Gene3D G3DSA:3.40.50.300 436 687 2.7E-91 T 14-10-2018 PACID_05440 9c4063fa6ed6c14e2a241fa696cdd40c 688 Pfam PF00664 ABC transporter transmembrane region 74 395 1.4E-60 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 PACID_31820 83295540e0a3fc91bd45a1fb2378bfc2 292 Gene3D G3DSA:3.20.20.370 1 292 1.0E-33 T 14-10-2018 PACID_31820 83295540e0a3fc91bd45a1fb2378bfc2 292 Pfam PF04794 YdjC-like protein 8 282 1.3E-34 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like PACID_31820 83295540e0a3fc91bd45a1fb2378bfc2 292 SUPERFAMILY SSF88713 7 290 6.0E-31 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PACID_24770 c3088e67d9125b737a9b7d9af2945666 349 SMART SM00382 34 222 1.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_24770 c3088e67d9125b737a9b7d9af2945666 349 Pfam PF09383 NIL domain 269 331 1.9E-4 T 14-10-2018 IPR018449 NIL domain PACID_24770 c3088e67d9125b737a9b7d9af2945666 349 Pfam PF00005 ABC transporter 25 173 9.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_24770 c3088e67d9125b737a9b7d9af2945666 349 SMART SM00930 267 343 0.0026 T 14-10-2018 IPR018449 NIL domain PACID_24770 c3088e67d9125b737a9b7d9af2945666 349 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_24770 c3088e67d9125b737a9b7d9af2945666 349 Gene3D G3DSA:3.40.50.300 3 281 1.4E-85 T 14-10-2018 PACID_24770 c3088e67d9125b737a9b7d9af2945666 349 SUPERFAMILY SSF52540 5 244 3.93E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_24770 c3088e67d9125b737a9b7d9af2945666 349 SUPERFAMILY SSF55021 260 332 4.01E-5 T 14-10-2018 PACID_03000 f6e5b6cfb50ed03a6855076e37858870 336 SUPERFAMILY SSF47413 8 57 6.93E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_03000 f6e5b6cfb50ed03a6855076e37858870 336 Gene3D G3DSA:3.40.50.2300 163 291 9.4E-54 T 14-10-2018 PACID_03000 f6e5b6cfb50ed03a6855076e37858870 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 54 2.7E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_03000 f6e5b6cfb50ed03a6855076e37858870 336 Gene3D G3DSA:3.40.50.2300 70 306 9.4E-54 T 14-10-2018 PACID_03000 f6e5b6cfb50ed03a6855076e37858870 336 Pfam PF13377 Periplasmic binding protein-like domain 173 332 1.2E-29 T 14-10-2018 PACID_03000 f6e5b6cfb50ed03a6855076e37858870 336 SUPERFAMILY SSF53822 69 334 3.62E-47 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_03000 f6e5b6cfb50ed03a6855076e37858870 336 SMART SM00354 9 79 6.4E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_03000 f6e5b6cfb50ed03a6855076e37858870 336 Gene3D G3DSA:1.10.260.40 3 53 1.3E-18 T 14-10-2018 PACID_14460 f39a5edb37a914bd08489aa67403ba5f 249 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 209 1.1E-34 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PACID_14460 f39a5edb37a914bd08489aa67403ba5f 249 SUPERFAMILY SSF57863 83 236 7.85E-39 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger PACID_14460 f39a5edb37a914bd08489aa67403ba5f 249 Hamap MF_00201 DNA repair protein RecO [recO]. 2 247 26.786 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PACID_14460 f39a5edb37a914bd08489aa67403ba5f 249 SUPERFAMILY SSF50249 1 79 7.88E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_14460 f39a5edb37a914bd08489aa67403ba5f 249 Gene3D G3DSA:2.40.50.140 2 82 4.2E-26 T 14-10-2018 PACID_14460 f39a5edb37a914bd08489aa67403ba5f 249 Pfam PF02565 Recombination protein O C terminal 84 242 1.1E-34 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 PACID_14460 f39a5edb37a914bd08489aa67403ba5f 249 Pfam PF11967 Recombination protein O N terminal 1 79 3.4E-26 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal PACID_16730 64a604819d5cc1bd1f64b1bbd52529fe 217 Gene3D G3DSA:3.30.230.30 3 140 7.2E-43 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily PACID_16730 64a604819d5cc1bd1f64b1bbd52529fe 217 SUPERFAMILY SSF54211 7 135 1.06E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_16730 64a604819d5cc1bd1f64b1bbd52529fe 217 Pfam PF01205 Uncharacterized protein family UPF0029 19 130 1.3E-23 T 14-10-2018 IPR001498 Impact, N-terminal PACID_33600 267f40873065e54c83d3e39d321485f8 386 SUPERFAMILY SSF110738 17 371 2.09E-99 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 PACID_33600 267f40873065e54c83d3e39d321485f8 386 Gene3D G3DSA:3.90.1510.10 56 291 2.0E-109 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 PACID_33600 267f40873065e54c83d3e39d321485f8 386 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 17 356 8.3E-100 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PACID_33600 267f40873065e54c83d3e39d321485f8 386 PIRSF PIRSF006078 15 384 4.2E-117 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PACID_33600 267f40873065e54c83d3e39d321485f8 386 Pfam PF02595 Glycerate kinase family 17 381 1.0E-110 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PACID_33600 267f40873065e54c83d3e39d321485f8 386 Gene3D G3DSA:3.40.50.10350 17 347 2.0E-109 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold PACID_00670 fe34c1f6daf45834ef8266a72c40d4a5 488 SUPERFAMILY SSF48239 142 288 1.59E-7 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PACID_00670 fe34c1f6daf45834ef8266a72c40d4a5 488 Gene3D G3DSA:1.50.10.20 53 256 1.2E-7 T 14-10-2018 PACID_18070 1340365ff8de1d56fa4fbdaf42bff314 208 Pfam PF00117 Glutamine amidotransferase class-I 9 201 5.3E-19 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_18070 1340365ff8de1d56fa4fbdaf42bff314 208 PIRSF PIRSF000495 5 207 2.8E-62 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PACID_18070 1340365ff8de1d56fa4fbdaf42bff314 208 Gene3D G3DSA:3.40.50.880 3 207 1.5E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_18070 1340365ff8de1d56fa4fbdaf42bff314 208 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 6 204 31.943 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PACID_18070 1340365ff8de1d56fa4fbdaf42bff314 208 SUPERFAMILY SSF52317 6 205 1.21E-51 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_18070 1340365ff8de1d56fa4fbdaf42bff314 208 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 7 203 8.0E-59 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 PACID_25650 63c45e3af2befa1408929aa6a535be86 362 Pfam PF00356 Bacterial regulatory proteins, lacI family 27 72 4.1E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_25650 63c45e3af2befa1408929aa6a535be86 362 SMART SM00354 25 95 7.1E-25 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_25650 63c45e3af2befa1408929aa6a535be86 362 Gene3D G3DSA:1.10.260.40 18 82 1.6E-21 T 14-10-2018 PACID_25650 63c45e3af2befa1408929aa6a535be86 362 SUPERFAMILY SSF53822 82 345 2.94E-55 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_25650 63c45e3af2befa1408929aa6a535be86 362 SUPERFAMILY SSF47413 25 83 2.93E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_25650 63c45e3af2befa1408929aa6a535be86 362 ProSitePatterns PS00356 LacI-type HTH domain signature. 28 46 - T 14-10-2018 PACID_25650 63c45e3af2befa1408929aa6a535be86 362 Pfam PF13377 Periplasmic binding protein-like domain 196 362 3.8E-32 T 14-10-2018 PACID_25650 63c45e3af2befa1408929aa6a535be86 362 Gene3D G3DSA:3.40.50.2300 83 339 1.7E-66 T 14-10-2018 PACID_25650 63c45e3af2befa1408929aa6a535be86 362 Gene3D G3DSA:3.40.50.2300 186 320 1.7E-66 T 14-10-2018 PACID_05400 b834905de3a30cae34626927ca45bb10 295 Gene3D G3DSA:1.10.3720.10 10 285 1.7E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_05400 b834905de3a30cae34626927ca45bb10 295 SUPERFAMILY SSF161098 16 295 2.49E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_05400 b834905de3a30cae34626927ca45bb10 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 286 2.0E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_02280 3cb8302d9931d964ddb80d3544c1c8e3 572 Gene3D G3DSA:3.40.190.10 231 321 1.4E-17 T 14-10-2018 PACID_02280 3cb8302d9931d964ddb80d3544c1c8e3 572 Gene3D G3DSA:3.90.76.10 99 212 1.7E-24 T 14-10-2018 PACID_02280 3cb8302d9931d964ddb80d3544c1c8e3 572 SUPERFAMILY SSF53850 88 568 1.13E-83 T 14-10-2018 PACID_02280 3cb8302d9931d964ddb80d3544c1c8e3 572 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 131 492 6.8E-53 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PACID_02280 3cb8302d9931d964ddb80d3544c1c8e3 572 Gene3D G3DSA:3.10.105.10 322 541 2.1E-39 T 14-10-2018 PACID_32330 51b680baa729c91e045853f97291521d 79 Pfam PF01084 Ribosomal protein S18 24 72 4.4E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 Gene3D G3DSA:4.10.640.10 2 79 1.5E-25 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 6 77 19.513 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 SUPERFAMILY SSF46911 4 75 6.15E-24 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 PRINTS PR00974 Ribosomal protein S18 family signature 32 42 5.9E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 PRINTS PR00974 Ribosomal protein S18 family signature 42 49 5.9E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 PRINTS PR00974 Ribosomal protein S18 family signature 64 74 5.9E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 PRINTS PR00974 Ribosomal protein S18 family signature 50 64 5.9E-18 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 74 4.0E-21 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 75 7.3E-23 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32330 51b680baa729c91e045853f97291521d 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 25 48 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_31980 fa7660a07f468f62188ce0ba110033e3 431 Pfam PF13416 Bacterial extracellular solute-binding protein 60 369 7.3E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_31980 fa7660a07f468f62188ce0ba110033e3 431 SUPERFAMILY SSF53850 37 425 1.81E-45 T 14-10-2018 PACID_31980 fa7660a07f468f62188ce0ba110033e3 431 Gene3D G3DSA:3.40.190.10 154 387 1.1E-67 T 14-10-2018 PACID_31980 fa7660a07f468f62188ce0ba110033e3 431 Gene3D G3DSA:3.40.190.10 58 374 1.1E-67 T 14-10-2018 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 Pfam PF00119 ATP synthase A chain 38 252 4.5E-51 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 Gene3D G3DSA:1.20.120.220 84 260 1.3E-30 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 ProSitePatterns PS00449 ATP synthase a subunit signature. 180 189 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 SUPERFAMILY SSF81336 84 252 4.58E-35 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 255 4.1E-40 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 PRINTS PR00123 ATP synthase A subunit signature 92 108 4.7E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 PRINTS PR00123 ATP synthase A subunit signature 177 199 4.7E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 PRINTS PR00123 ATP synthase A subunit signature 239 254 4.7E-18 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19410 da3f925f4d5bff2abc4fab6c58060251 260 Hamap MF_01393 ATP synthase subunit a [atpB]. 9 259 13.155 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_04170 052e1335ec9aa19e18850e116f961ff4 362 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 118 185 7.1E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_04170 052e1335ec9aa19e18850e116f961ff4 362 SUPERFAMILY SSF51735 10 136 1.56E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_04170 052e1335ec9aa19e18850e116f961ff4 362 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 12 105 1.9E-16 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_04170 052e1335ec9aa19e18850e116f961ff4 362 SUPERFAMILY SSF55347 111 277 3.6E-30 T 14-10-2018 PACID_04170 052e1335ec9aa19e18850e116f961ff4 362 Gene3D G3DSA:3.40.50.720 2 115 3.5E-26 T 14-10-2018 PACID_04170 052e1335ec9aa19e18850e116f961ff4 362 Gene3D G3DSA:3.30.360.10 116 361 1.7E-58 T 14-10-2018 PACID_28130 fa685aafdf2be3ffad80836c0fee46ac 714 Pfam PF06778 Chlorite dismutase 532 702 3.8E-56 T 14-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase PACID_28130 fa685aafdf2be3ffad80836c0fee46ac 714 Hamap MF_00323 Ferrochelatase [hemH]. 16 330 26.563 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PACID_28130 fa685aafdf2be3ffad80836c0fee46ac 714 Gene3D G3DSA:3.40.50.1400 20 325 1.3E-101 T 14-10-2018 PACID_28130 fa685aafdf2be3ffad80836c0fee46ac 714 Gene3D G3DSA:3.30.70.1100 596 710 6.7E-32 T 14-10-2018 PACID_28130 fa685aafdf2be3ffad80836c0fee46ac 714 SUPERFAMILY SSF54909 488 707 8.31E-61 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_28130 fa685aafdf2be3ffad80836c0fee46ac 714 Gene3D G3DSA:3.40.50.1400 159 311 1.3E-101 T 14-10-2018 PACID_28130 fa685aafdf2be3ffad80836c0fee46ac 714 SUPERFAMILY SSF53800 16 332 1.8E-66 T 14-10-2018 PACID_28130 fa685aafdf2be3ffad80836c0fee46ac 714 Pfam PF00762 Ferrochelatase 18 327 6.2E-75 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 PACID_34190 eb318f5c8015a6a29b5c649495ff228e 444 SUPERFAMILY SSF53383 29 416 6.74E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_34190 eb318f5c8015a6a29b5c649495ff228e 444 Gene3D G3DSA:3.40.640.10 86 309 7.5E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_34190 eb318f5c8015a6a29b5c649495ff228e 444 Gene3D G3DSA:3.90.1150.10 39 414 7.5E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_34190 eb318f5c8015a6a29b5c649495ff228e 444 Pfam PF00155 Aminotransferase class I and II 65 410 2.8E-33 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 Hamap MF_00580 10 kDa chaperonin [groS]. 4 97 25.736 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 Gene3D G3DSA:2.30.33.40 1 98 1.7E-39 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 PRINTS PR00297 10kDa chaperonin signature 5 20 7.9E-30 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 PRINTS PR00297 10kDa chaperonin signature 62 74 7.9E-30 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 PRINTS PR00297 10kDa chaperonin signature 27 48 7.9E-30 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 PRINTS PR00297 10kDa chaperonin signature 83 96 7.9E-30 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 SMART SM00883 4 96 5.4E-56 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 SUPERFAMILY SSF50129 3 97 2.0E-35 T 14-10-2018 IPR011032 GroES-like superfamily PACID_24940 62d085500d91e066420eb9f04b8d6268 98 Pfam PF00166 Chaperonin 10 Kd subunit 5 96 2.4E-35 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 PACID_24940 62d085500d91e066420eb9f04b8d6268 98 ProSitePatterns PS00681 Chaperonins cpn10 signature. 5 29 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 SMART SM01274 91 273 2.3E-94 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 SMART SM00919 283 542 1.8E-116 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 SUPERFAMILY SSF53223 16 282 3.17E-99 T 14-10-2018 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 PIRSF PIRSF000106 6 574 2.6E-208 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 ProSitePatterns PS00331 Malic enzymes signature. 279 295 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 Pfam PF00390 Malic enzyme, N-terminal domain 91 272 2.6E-69 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 SUPERFAMILY SSF51735 283 571 4.43E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 PRINTS PR00072 Malic enzyme signature 159 188 1.8E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 PRINTS PR00072 Malic enzyme signature 310 326 1.8E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 PRINTS PR00072 Malic enzyme signature 195 217 1.8E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 PRINTS PR00072 Malic enzyme signature 420 436 1.8E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 PRINTS PR00072 Malic enzyme signature 254 272 1.8E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 PRINTS PR00072 Malic enzyme signature 279 295 1.8E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 PRINTS PR00072 Malic enzyme signature 97 121 1.8E-69 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 Pfam PF03949 Malic enzyme, NAD binding domain 283 541 6.0E-94 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 Gene3D G3DSA:3.40.50.10380 25 280 9.5E-102 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 PACID_02100 fc8897cbeb8dbce1eb9a073a5141f88d 574 Gene3D G3DSA:3.40.50.720 281 574 2.4E-101 T 14-10-2018 PACID_31260 246087c54258e710dbd91215ebe9c285 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PACID_31260 246087c54258e710dbd91215ebe9c285 496 Pfam PF00171 Aldehyde dehydrogenase family 29 482 2.3E-160 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_31260 246087c54258e710dbd91215ebe9c285 496 Gene3D G3DSA:3.40.605.10 32 479 5.3E-170 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_31260 246087c54258e710dbd91215ebe9c285 496 Gene3D G3DSA:3.40.309.10 266 455 5.3E-170 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_31260 246087c54258e710dbd91215ebe9c285 496 SUPERFAMILY SSF53720 13 488 8.9E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_00880 fec72eb23ac42e87f7879816c8ecee18 213 SMART SM01007 8 181 4.9E-51 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PACID_00880 fec72eb23ac42e87f7879816c8ecee18 213 SUPERFAMILY SSF53639 2 208 4.51E-58 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PACID_00880 fec72eb23ac42e87f7879816c8ecee18 213 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 181 6.3E-43 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PACID_00880 fec72eb23ac42e87f7879816c8ecee18 213 Gene3D G3DSA:3.40.225.10 3 211 2.6E-63 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PACID_26780 d50a6bd65da58033f4f671f0dce040db 862 SUPERFAMILY SSF52009 748 856 1.23E-29 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 PACID_26780 d50a6bd65da58033f4f671f0dce040db 862 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 15 312 2.7E-94 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 PACID_26780 d50a6bd65da58033f4f671f0dce040db 862 Pfam PF00391 PEP-utilising enzyme, mobile domain 781 852 1.6E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 PACID_26780 d50a6bd65da58033f4f671f0dce040db 862 Gene3D G3DSA:3.30.1490.20 1 180 3.7E-64 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PACID_26780 d50a6bd65da58033f4f671f0dce040db 862 SUPERFAMILY SSF56059 3 315 6.71E-92 T 14-10-2018 PACID_26780 d50a6bd65da58033f4f671f0dce040db 862 Gene3D G3DSA:3.50.30.10 752 860 1.3E-30 T 14-10-2018 PACID_26780 d50a6bd65da58033f4f671f0dce040db 862 Gene3D G3DSA:3.30.470.20 182 319 1.1E-42 T 14-10-2018 PACID_08060 3d4a3eae315699928feede88041b2794 399 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 265 374 9.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_08060 3d4a3eae315699928feede88041b2794 399 Gene3D G3DSA:3.30.565.10 223 377 1.2E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_08060 3d4a3eae315699928feede88041b2794 399 Pfam PF00512 His Kinase A (phospho-acceptor) domain 154 219 9.4E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_08060 3d4a3eae315699928feede88041b2794 399 SMART SM00388 154 220 2.2E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_08060 3d4a3eae315699928feede88041b2794 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 316 1.9E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_08060 3d4a3eae315699928feede88041b2794 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 337 355 1.9E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_08060 3d4a3eae315699928feede88041b2794 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 361 374 1.9E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_08060 3d4a3eae315699928feede88041b2794 399 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 330 1.9E-20 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_08060 3d4a3eae315699928feede88041b2794 399 SUPERFAMILY SSF55874 210 374 3.27E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_08060 3d4a3eae315699928feede88041b2794 399 SMART SM00387 265 377 2.2E-37 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_08060 3d4a3eae315699928feede88041b2794 399 Gene3D G3DSA:1.10.287.130 147 222 1.3E-16 T 14-10-2018 PACID_08060 3d4a3eae315699928feede88041b2794 399 SUPERFAMILY SSF47384 143 220 1.71E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_28780 dde98e80faa49c91b41ec54694ccc7f1 244 SUPERFAMILY SSF160904 48 231 9.68E-31 T 14-10-2018 PACID_28780 dde98e80faa49c91b41ec54694ccc7f1 244 Pfam PF07336 Putative stress-induced transcription regulator 53 185 3.4E-12 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator PACID_28780 dde98e80faa49c91b41ec54694ccc7f1 244 Gene3D G3DSA:1.10.3300.10 48 234 5.6E-14 T 14-10-2018 IPR023286 ABATE domain superfamily PACID_28780 dde98e80faa49c91b41ec54694ccc7f1 244 Pfam PF11706 CGNR zinc finger 189 231 8.3E-15 T 14-10-2018 IPR021005 Zinc finger, CGNR PACID_15250 33b0731386960f297f78cefe3827b30a 349 Gene3D G3DSA:3.40.50.300 27 268 3.1E-82 T 14-10-2018 PACID_15250 33b0731386960f297f78cefe3827b30a 349 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 5 325 2.6E-172 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_15250 33b0731386960f297f78cefe3827b30a 349 Hamap MF_00268 Protein RecA [recA]. 6 331 51.888 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_15250 33b0731386960f297f78cefe3827b30a 349 ProSitePatterns PS00321 recA signature. 214 222 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 PACID_15250 33b0731386960f297f78cefe3827b30a 349 SUPERFAMILY SSF52540 5 268 1.59E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_15250 33b0731386960f297f78cefe3827b30a 349 SMART SM00382 58 229 2.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_15250 33b0731386960f297f78cefe3827b30a 349 Gene3D G3DSA:3.30.250.10 269 342 1.6E-26 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal PACID_15250 33b0731386960f297f78cefe3827b30a 349 SUPERFAMILY SSF54752 269 327 3.4E-18 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal PACID_15250 33b0731386960f297f78cefe3827b30a 349 PRINTS PR00142 RecA protein signature 166 195 1.3E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_15250 33b0731386960f297f78cefe3827b30a 349 PRINTS PR00142 RecA protein signature 128 157 1.3E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_15250 33b0731386960f297f78cefe3827b30a 349 PRINTS PR00142 RecA protein signature 211 239 1.3E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_15250 33b0731386960f297f78cefe3827b30a 349 PRINTS PR00142 RecA protein signature 244 273 1.3E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_15250 33b0731386960f297f78cefe3827b30a 349 PRINTS PR00142 RecA protein signature 299 316 1.3E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_15250 33b0731386960f297f78cefe3827b30a 349 PRINTS PR00142 RecA protein signature 94 123 1.3E-84 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_15250 33b0731386960f297f78cefe3827b30a 349 Pfam PF00154 recA bacterial DNA recombination protein 8 269 2.9E-143 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 PACID_29360 bc70e42c18352feb1504d9277f6d925c 534 Gene3D G3DSA:1.20.144.10 214 360 1.7E-34 T 14-10-2018 PACID_29360 bc70e42c18352feb1504d9277f6d925c 534 SUPERFAMILY SSF48317 178 343 9.55E-21 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PACID_29360 bc70e42c18352feb1504d9277f6d925c 534 Pfam PF01569 PAP2 superfamily 186 332 2.5E-8 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PACID_26530 6f2845f3897100efc36513f7ed62086f 292 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 12 284 3.4E-72 T 14-10-2018 PACID_26530 6f2845f3897100efc36513f7ed62086f 292 PIRSF PIRSF005355 1 292 5.2E-80 T 14-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 PACID_26530 6f2845f3897100efc36513f7ed62086f 292 Pfam PF01040 UbiA prenyltransferase family 21 252 2.0E-30 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 PACID_26530 6f2845f3897100efc36513f7ed62086f 292 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 3 289 20.29 T 14-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 PACID_11760 7747e81da3ff655063941aed03101268 385 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 115 367 3.8E-86 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 PACID_11760 7747e81da3ff655063941aed03101268 385 Gene3D G3DSA:3.40.50.300 109 365 1.7E-69 T 14-10-2018 PACID_11760 7747e81da3ff655063941aed03101268 385 ProSitePatterns PS01215 Mrp family signature. 221 237 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 PACID_11760 7747e81da3ff655063941aed03101268 385 SUPERFAMILY SSF52540 115 371 8.91E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_11760 7747e81da3ff655063941aed03101268 385 Hamap MF_02040 Iron-sulfur cluster carrier protein. 106 368 33.476 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein PACID_11760 7747e81da3ff655063941aed03101268 385 SUPERFAMILY SSF117916 10 98 2.39E-22 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PACID_11760 7747e81da3ff655063941aed03101268 385 Gene3D G3DSA:3.30.300.130 8 100 2.7E-20 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PACID_11760 7747e81da3ff655063941aed03101268 385 Pfam PF01883 Iron-sulfur cluster assembly protein 11 80 1.3E-18 T 14-10-2018 IPR002744 MIP18 family-like PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 15 472 2.2E-152 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 Pfam PF12804 MobA-like NTP transferase domain 16 145 2.4E-23 T 14-10-2018 IPR025877 MobA-like NTP transferase PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 SUPERFAMILY SSF53448 15 273 2.7E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 423 451 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 13 472 36.752 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 338 369 4.5E-5 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 415 448 1.3E-4 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 SUPERFAMILY SSF51161 275 458 9.98E-39 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 Gene3D G3DSA:2.160.10.10 273 459 2.4E-48 T 14-10-2018 PACID_09930 a304ed8b8f8442d4d2885185cf006c0c 500 Gene3D G3DSA:3.90.550.10 11 272 1.2E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_18400 9bbb4279d17e1d061fd93fe1d57f4485 258 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 32 256 2.0E-39 T 14-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit PACID_18400 9bbb4279d17e1d061fd93fe1d57f4485 258 Gene3D G3DSA:1.20.1300.10 21 257 6.5E-41 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_18400 9bbb4279d17e1d061fd93fe1d57f4485 258 SUPERFAMILY SSF81343 25 257 8.37E-39 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_32770 d7dc01992a0c72a7450a340523f382f9 181 SMART SM00867 10 178 3.9E-72 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PACID_32770 d7dc01992a0c72a7450a340523f382f9 181 SUPERFAMILY SSF101874 9 180 3.53E-58 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PACID_32770 d7dc01992a0c72a7450a340523f382f9 181 Pfam PF04264 YceI-like domain 11 176 6.7E-47 T 14-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like PACID_32770 d7dc01992a0c72a7450a340523f382f9 181 Gene3D G3DSA:2.40.128.110 10 181 2.9E-55 T 14-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily PACID_21150 a2948709a64c30d3e36d88474d604de4 469 SUPERFAMILY SSF53850 30 261 1.02E-38 T 14-10-2018 PACID_21150 a2948709a64c30d3e36d88474d604de4 469 Pfam PF13416 Bacterial extracellular solute-binding protein 70 266 1.4E-19 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_21150 a2948709a64c30d3e36d88474d604de4 469 Gene3D G3DSA:3.40.190.10 42 282 2.0E-37 T 14-10-2018 PACID_29680 75a5da170ab637fdaf79b9a3df1f0bfa 361 Pfam PF03631 Virulence factor BrkB 49 306 1.5E-61 T 14-10-2018 IPR017039 Virulence factor BrkB PACID_29680 75a5da170ab637fdaf79b9a3df1f0bfa 361 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 45 304 3.0E-35 T 14-10-2018 IPR017039 Virulence factor BrkB PACID_29680 75a5da170ab637fdaf79b9a3df1f0bfa 361 PIRSF PIRSF035875 21 327 1.8E-75 T 14-10-2018 IPR017039 Virulence factor BrkB PACID_18250 0d22cc28623c1df5daaf7f2807cc55fa 269 Pfam PF00218 Indole-3-glycerol phosphate synthase 12 262 3.4E-79 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 PACID_18250 0d22cc28623c1df5daaf7f2807cc55fa 269 Gene3D G3DSA:3.20.20.70 5 269 2.0E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_18250 0d22cc28623c1df5daaf7f2807cc55fa 269 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 59 76 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 PACID_18250 0d22cc28623c1df5daaf7f2807cc55fa 269 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 10 265 32.419 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 PACID_18250 0d22cc28623c1df5daaf7f2807cc55fa 269 SUPERFAMILY SSF51366 21 264 8.63E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PACID_10750 298b30dc624f3dff733dbb06b60ce1df 298 Pfam PF00005 ABC transporter 20 159 7.3E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_10750 298b30dc624f3dff733dbb06b60ce1df 298 SMART SM00382 29 207 5.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_10750 298b30dc624f3dff733dbb06b60ce1df 298 Gene3D G3DSA:3.40.50.300 3 234 6.1E-52 T 14-10-2018 PACID_10750 298b30dc624f3dff733dbb06b60ce1df 298 SUPERFAMILY SSF52540 4 219 5.93E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07240 b32e9f2e52a5632075e61e252459b1d0 393 SMART SM00387 299 393 1.9E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_07240 b32e9f2e52a5632075e61e252459b1d0 393 Gene3D G3DSA:3.30.565.10 263 391 2.4E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_07240 b32e9f2e52a5632075e61e252459b1d0 393 SUPERFAMILY SSF55874 273 390 6.31E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_07240 b32e9f2e52a5632075e61e252459b1d0 393 Pfam PF07730 Histidine kinase 180 253 8.4E-17 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 SUPERFAMILY SSF51735 300 396 1.67E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 301 418 3.7E-20 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 Pfam PF13241 Putative NAD(P)-binding 301 407 4.2E-21 T 14-10-2018 PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 Pfam PF01903 CbiX 28 148 9.2E-17 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 Pfam PF01903 CbiX 174 277 1.3E-16 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 Gene3D G3DSA:3.40.50.720 296 421 1.2E-27 T 14-10-2018 PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 SUPERFAMILY SSF53800 22 282 1.07E-34 T 14-10-2018 PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 Gene3D G3DSA:3.40.50.1400 163 284 1.2E-18 T 14-10-2018 PACID_08840 93971c0fb15f29f5f7a3c714eda229d3 440 Gene3D G3DSA:3.40.50.1400 20 159 1.2E-23 T 14-10-2018 PACID_05750 cefccb882603e4c3ff65fbdfdbbd7ac7 485 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 22 192 1.8E-37 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PACID_05750 cefccb882603e4c3ff65fbdfdbbd7ac7 485 Gene3D G3DSA:2.60.120.10 13 198 5.0E-50 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_05750 cefccb882603e4c3ff65fbdfdbbd7ac7 485 SUPERFAMILY SSF51182 18 195 4.45E-52 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PACID_05750 cefccb882603e4c3ff65fbdfdbbd7ac7 485 Pfam PF04321 RmlD substrate binding domain 200 482 3.3E-57 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 PACID_05750 cefccb882603e4c3ff65fbdfdbbd7ac7 485 Gene3D G3DSA:3.40.50.720 202 471 2.3E-67 T 14-10-2018 PACID_05750 cefccb882603e4c3ff65fbdfdbbd7ac7 485 SUPERFAMILY SSF51735 200 481 2.0E-62 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_05750 cefccb882603e4c3ff65fbdfdbbd7ac7 485 Gene3D G3DSA:3.90.25.10 357 477 2.3E-67 T 14-10-2018 PACID_05750 cefccb882603e4c3ff65fbdfdbbd7ac7 485 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 19 195 5.0E-71 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 PACID_24630 3c20a5d3e8ee138752a5465cef965ac4 193 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 4 188 27.519 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 PACID_24630 3c20a5d3e8ee138752a5465cef965ac4 193 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 4 188 3.4E-62 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 PACID_24630 3c20a5d3e8ee138752a5465cef965ac4 193 Pfam PF00551 Formyl transferase 4 182 4.3E-49 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PACID_24630 3c20a5d3e8ee138752a5465cef965ac4 193 Gene3D G3DSA:3.40.50.170 1 192 9.2E-73 T 14-10-2018 PACID_24630 3c20a5d3e8ee138752a5465cef965ac4 193 SUPERFAMILY SSF53328 4 187 1.44E-55 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Gene3D G3DSA:1.10.601.10 161 198 4.9E-8 T 14-10-2018 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Gene3D G3DSA:1.10.601.10 199 301 3.7E-50 T 14-10-2018 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Pfam PF04539 Sigma-70 region 3 308 384 1.6E-28 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 SUPERFAMILY SSF88659 302 375 3.36E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Pfam PF04545 Sigma-70, region 4 397 450 2.8E-18 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Gene3D G3DSA:1.10.10.10 379 462 6.6E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_16080 c6ebb8810f1d807505fad73db5958006 462 SUPERFAMILY SSF88946 160 299 9.53E-52 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 84 462 30.38 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 SUPERFAMILY SSF88659 360 461 1.85E-27 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_16080 c6ebb8810f1d807505fad73db5958006 462 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 422 448 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Gene3D G3DSA:1.10.10.10 302 377 4.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_16080 c6ebb8810f1d807505fad73db5958006 462 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 225 461 7.5E-113 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 253 266 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Pfam PF04542 Sigma-70 region 2 229 298 6.4E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 Pfam PF00140 Sigma-70 factor, region 1.2 163 196 4.0E-14 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 225 450 3.7E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 PRINTS PR00046 Major sigma-70 factor signature 437 448 4.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 PRINTS PR00046 Major sigma-70 factor signature 253 266 4.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 PRINTS PR00046 Major sigma-70 factor signature 422 437 4.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 PRINTS PR00046 Major sigma-70 factor signature 401 413 4.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16080 c6ebb8810f1d807505fad73db5958006 462 PRINTS PR00046 Major sigma-70 factor signature 277 285 4.3E-29 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_34280 fb432e278efa4f9c290a798089045d90 201 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 17 175 6.2E-37 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PACID_34280 fb432e278efa4f9c290a798089045d90 201 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 5 185 23.588 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PACID_34280 fb432e278efa4f9c290a798089045d90 201 Pfam PF02527 rRNA small subunit methyltransferase G 15 174 4.2E-45 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PACID_34280 fb432e278efa4f9c290a798089045d90 201 Gene3D G3DSA:3.40.50.150 5 201 3.8E-52 T 14-10-2018 PACID_34280 fb432e278efa4f9c290a798089045d90 201 PIRSF PIRSF003078 3 201 2.0E-43 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 PACID_34280 fb432e278efa4f9c290a798089045d90 201 SUPERFAMILY SSF53335 16 176 1.46E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_17250 aa2ec92a91d1f6fbd5de04eb4728cf5e 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_17250 aa2ec92a91d1f6fbd5de04eb4728cf5e 404 Gene3D G3DSA:3.40.640.10 57 307 2.7E-135 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_17250 aa2ec92a91d1f6fbd5de04eb4728cf5e 404 PIRSF PIRSF000521 5 148 4.5E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_17250 aa2ec92a91d1f6fbd5de04eb4728cf5e 404 PIRSF PIRSF000521 170 400 4.4E-25 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_17250 aa2ec92a91d1f6fbd5de04eb4728cf5e 404 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 6 397 6.9E-141 T 14-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PACID_17250 aa2ec92a91d1f6fbd5de04eb4728cf5e 404 Pfam PF00202 Aminotransferase class-III 15 397 5.1E-111 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_17250 aa2ec92a91d1f6fbd5de04eb4728cf5e 404 Gene3D G3DSA:3.90.1150.10 12 387 2.7E-135 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_17250 aa2ec92a91d1f6fbd5de04eb4728cf5e 404 SUPERFAMILY SSF53383 2 399 7.51E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_30520 59222e7cccc9a4b0ee930434a546d1cc 339 SUPERFAMILY SSF53850 75 338 1.11E-52 T 14-10-2018 PACID_30520 59222e7cccc9a4b0ee930434a546d1cc 339 Gene3D G3DSA:3.40.190.120 174 279 1.3E-82 T 14-10-2018 PACID_30520 59222e7cccc9a4b0ee930434a546d1cc 339 Gene3D G3DSA:3.40.190.10 77 338 1.3E-82 T 14-10-2018 PACID_30520 59222e7cccc9a4b0ee930434a546d1cc 339 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 76 335 1.8E-53 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PACID_24780 8f4fb93fdb008a548114215afd8ed92b 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 7.8E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_24780 8f4fb93fdb008a548114215afd8ed92b 218 SUPERFAMILY SSF161098 8 201 7.85E-39 T 14-10-2018 IPR035906 MetI-like superfamily PACID_24780 8f4fb93fdb008a548114215afd8ed92b 218 Gene3D G3DSA:1.10.3720.10 5 217 1.4E-40 T 14-10-2018 IPR035906 MetI-like superfamily PACID_00390 99dfd8503a0ded801039c5764818522b 350 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 42 178 1.9E-40 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 182 348 4.2E-22 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 PIRSF PIRSF000102 37 350 1.0E-93 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 209 215 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 PACID_00390 99dfd8503a0ded801039c5764818522b 350 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 45 342 1.5E-97 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 PACID_00390 99dfd8503a0ded801039c5764818522b 350 Gene3D G3DSA:3.40.50.720 24 181 1.6E-53 T 14-10-2018 PACID_00390 99dfd8503a0ded801039c5764818522b 350 PRINTS PR00086 L-lactate dehydrogenase signature 42 66 2.2E-38 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 PRINTS PR00086 L-lactate dehydrogenase signature 177 195 2.2E-38 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 PRINTS PR00086 L-lactate dehydrogenase signature 153 173 2.2E-38 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 PRINTS PR00086 L-lactate dehydrogenase signature 207 220 2.2E-38 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 PRINTS PR00086 L-lactate dehydrogenase signature 67 91 2.2E-38 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 SUPERFAMILY SSF51735 38 181 3.15E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_00390 99dfd8503a0ded801039c5764818522b 350 Gene3D G3DSA:3.90.110.10 182 350 2.1E-49 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 SUPERFAMILY SSF56327 180 348 3.75E-45 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PACID_00390 99dfd8503a0ded801039c5764818522b 350 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 40 349 36.081 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 PACID_17280 4b7f0f9b5d7e1209afa530a3edbf38ac 175 SUPERFAMILY SSF53597 3 158 2.23E-29 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_17280 4b7f0f9b5d7e1209afa530a3edbf38ac 175 Gene3D G3DSA:3.40.430.10 3 173 1.1E-43 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_17280 4b7f0f9b5d7e1209afa530a3edbf38ac 175 Pfam PF01872 RibD C-terminal domain 72 150 1.9E-10 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PACID_21290 704d12b38565d745635488c9024af502 264 Gene3D G3DSA:2.10.109.10 160 238 4.1E-8 T 14-10-2018 PACID_21290 704d12b38565d745635488c9024af502 264 Gene3D G3DSA:2.10.109.10 45 159 9.6E-15 T 14-10-2018 PACID_21290 704d12b38565d745635488c9024af502 264 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 34 228 6.8E-34 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PACID_21290 704d12b38565d745635488c9024af502 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 175 194 7.7E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PACID_21290 704d12b38565d745635488c9024af502 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 49 65 7.7E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PACID_21290 704d12b38565d745635488c9024af502 264 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 122 134 7.7E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 PACID_21290 704d12b38565d745635488c9024af502 264 ProSitePatterns PS00761 Signal peptidases I signature 3. 180 193 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 PACID_21290 704d12b38565d745635488c9024af502 264 SUPERFAMILY SSF51306 47 234 4.71E-42 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily PACID_21290 704d12b38565d745635488c9024af502 264 Pfam PF00717 Peptidase S24-like 56 147 1.8E-12 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C PACID_26520 8cd3f3e28b05a776024725632f968621 94 SUPERFAMILY SSF54909 1 93 7.58E-26 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_26520 8cd3f3e28b05a776024725632f968621 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 1.4E-15 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain PACID_26520 8cd3f3e28b05a776024725632f968621 94 Gene3D G3DSA:3.30.70.100 1 94 2.6E-28 T 14-10-2018 PACID_20380 e4444b47316c1f19d6396e92e9ce732e 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 215 1.1E-85 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 PACID_20380 e4444b47316c1f19d6396e92e9ce732e 228 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_20380 e4444b47316c1f19d6396e92e9ce732e 228 Pfam PF00005 ABC transporter 19 166 1.3E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_20380 e4444b47316c1f19d6396e92e9ce732e 228 Gene3D G3DSA:3.40.50.300 1 225 7.9E-71 T 14-10-2018 PACID_20380 e4444b47316c1f19d6396e92e9ce732e 228 SMART SM00382 28 215 2.2E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_20380 e4444b47316c1f19d6396e92e9ce732e 228 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 32 45 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 PACID_20380 e4444b47316c1f19d6396e92e9ce732e 228 SUPERFAMILY SSF52540 1 221 9.85E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_10900 d7d6f9771d5ad8e9eb64d425d953cc33 208 PIRSF PIRSF031644 2 205 4.5E-58 T 14-10-2018 IPR008319 Uncharacterised conserved protein UCP031644 PACID_10900 d7d6f9771d5ad8e9eb64d425d953cc33 208 Gene3D G3DSA:3.20.80.10 1 202 4.5E-75 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily PACID_10900 d7d6f9771d5ad8e9eb64d425d953cc33 208 Pfam PF06445 GyrI-like small molecule binding domain 22 199 4.4E-22 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain PACID_10900 d7d6f9771d5ad8e9eb64d425d953cc33 208 SUPERFAMILY SSF55136 113 195 6.98E-12 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 SMART SM01192 139 423 1.5E-222 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 SUPERFAMILY SSF51604 138 422 1.2E-132 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 SUPERFAMILY SSF54826 3 138 7.95E-55 T 14-10-2018 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 SMART SM01193 4 134 4.5E-92 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 Gene3D G3DSA:3.20.20.120 128 424 2.0E-140 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 420 5.7E-132 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 Pfam PF03952 Enolase, N-terminal domain 4 134 7.9E-59 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 ProSitePatterns PS00164 Enolase signature. 332 345 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 Gene3D G3DSA:3.30.390.10 1 126 4.1E-54 T 14-10-2018 IPR029017 Enolase-like, N-terminal PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 Hamap MF_00318 Enolase [eno]. 2 409 45.942 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 423 7.5E-207 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 PRINTS PR00148 Enolase signature 332 346 5.9E-48 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 PRINTS PR00148 Enolase signature 37 51 5.9E-48 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 PRINTS PR00148 Enolase signature 107 123 5.9E-48 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 PRINTS PR00148 Enolase signature 161 174 5.9E-48 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 PRINTS PR00148 Enolase signature 361 378 5.9E-48 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 PRINTS PR00148 Enolase signature 309 320 5.9E-48 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_10000 c43e87920df7f92fe3dae00364c3d7ea 426 PIRSF PIRSF001400 1 422 4.5E-194 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 PACID_24180 d6493fe0645d9f81c4bf2144616af990 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 100 114 3.2E-6 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PACID_24180 d6493fe0645d9f81c4bf2144616af990 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 134 152 3.2E-6 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PACID_24180 d6493fe0645d9f81c4bf2144616af990 524 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 199 210 3.2E-6 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 PACID_24180 d6493fe0645d9f81c4bf2144616af990 524 Gene3D G3DSA:3.90.226.10 1 263 1.6E-93 T 14-10-2018 PACID_24180 d6493fe0645d9f81c4bf2144616af990 524 SUPERFAMILY SSF52096 248 524 9.02E-90 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_24180 d6493fe0645d9f81c4bf2144616af990 524 Pfam PF01039 Carboxyl transferase domain 33 522 2.0E-187 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 PACID_24180 d6493fe0645d9f81c4bf2144616af990 524 SUPERFAMILY SSF52096 11 261 3.32E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_24180 d6493fe0645d9f81c4bf2144616af990 524 Gene3D G3DSA:3.90.226.10 266 524 1.7E-91 T 14-10-2018 PACID_26630 2c32c00c6284df92dc00eb591cffbdfd 505 Gene3D G3DSA:3.40.1090.10 11 125 1.3E-11 T 14-10-2018 PACID_26630 2c32c00c6284df92dc00eb591cffbdfd 505 Gene3D G3DSA:3.40.1090.10 238 385 4.2E-18 T 14-10-2018 PACID_26630 2c32c00c6284df92dc00eb591cffbdfd 505 SUPERFAMILY SSF52151 20 367 1.2E-34 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PACID_26630 2c32c00c6284df92dc00eb591cffbdfd 505 Pfam PF01734 Patatin-like phospholipase 25 327 2.0E-32 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 PACID_12080 3cd6cda0a18498429f7b8877f673ac96 255 ProDom PD037701 MEMBRANE INTEGRAL TRANSMEMBRANE RV2219/MT2276 NARROWLY PROBABLE PRECURSOR SIGNAL MLCB22.21 32 249 1.0E-89 T 14-10-2018 PACID_12080 3cd6cda0a18498429f7b8877f673ac96 255 Pfam PF13829 Domain of unknown function (DUF4191) 31 249 4.3E-84 T 14-10-2018 IPR025445 Protein of unknown function DUF4191 PACID_31910 10c9d18c68dc379b35635c1d74d9a18f 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 313 2.6E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_31910 10c9d18c68dc379b35635c1d74d9a18f 315 Gene3D G3DSA:1.10.3720.10 74 315 1.8E-65 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31910 10c9d18c68dc379b35635c1d74d9a18f 315 SUPERFAMILY SSF161098 78 304 1.16E-56 T 14-10-2018 IPR035906 MetI-like superfamily PACID_33300 114fa2306bacd882515260e13d4e6e30 407 SMART SM00507 268 320 4.4E-7 T 14-10-2018 IPR003615 HNH nuclease PACID_33300 114fa2306bacd882515260e13d4e6e30 407 Pfam PF02720 Domain of unknown function (DUF222) 3 277 1.7E-14 T 14-10-2018 IPR003870 Domain of unknown function DUF222 PACID_33300 114fa2306bacd882515260e13d4e6e30 407 Pfam PF01844 HNH endonuclease 290 317 4.5E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PACID_31500 f12217cd8751721d99242d6b15041826 426 SUPERFAMILY SSF63380 178 270 5.3E-12 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PACID_31500 f12217cd8751721d99242d6b15041826 426 SUPERFAMILY SSF52343 261 409 1.2E-18 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PACID_31500 f12217cd8751721d99242d6b15041826 426 Gene3D G3DSA:3.40.50.80 273 415 2.6E-17 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PACID_31500 f12217cd8751721d99242d6b15041826 426 PRINTS PR00410 Phenol hydroxylase reductase family signature 379 387 3.3E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PACID_31500 f12217cd8751721d99242d6b15041826 426 PRINTS PR00410 Phenol hydroxylase reductase family signature 265 274 3.3E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PACID_31500 f12217cd8751721d99242d6b15041826 426 PRINTS PR00410 Phenol hydroxylase reductase family signature 281 300 3.3E-6 T 14-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 PACID_31500 f12217cd8751721d99242d6b15041826 426 Gene3D G3DSA:2.40.30.10 174 270 4.3E-9 T 14-10-2018 PACID_31500 f12217cd8751721d99242d6b15041826 426 Pfam PF01794 Ferric reductase like transmembrane component 8 129 8.2E-13 T 14-10-2018 IPR013130 Ferric reductase transmembrane component-like domain PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 PRINTS PR00126 ATP synthase gamma subunit signature 170 187 1.3E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 PRINTS PR00126 ATP synthase gamma subunit signature 275 296 1.3E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 PRINTS PR00126 ATP synthase gamma subunit signature 74 93 1.3E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 PRINTS PR00126 ATP synthase gamma subunit signature 244 263 1.3E-30 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 3 297 4.0E-88 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 Hamap MF_00815 ATP synthase gamma chain [atpG]. 2 297 32.559 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 Gene3D G3DSA:3.40.1380.10 62 216 8.6E-89 T 14-10-2018 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 SUPERFAMILY SSF52943 4 297 7.72E-77 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 Pfam PF00231 ATP synthase 4 297 5.0E-86 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19360 2bbbb10b734c44336b8a8e6f1438817e 304 Gene3D G3DSA:1.10.287.80 7 293 8.6E-89 T 14-10-2018 PACID_21380 644db494369c7bc2ce3c25a87585c080 392 Pfam PF01979 Amidohydrolase family 77 381 2.8E-11 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PACID_21380 644db494369c7bc2ce3c25a87585c080 392 Gene3D G3DSA:3.20.20.140 83 354 2.6E-46 T 14-10-2018 PACID_21380 644db494369c7bc2ce3c25a87585c080 392 SUPERFAMILY SSF51556 81 354 3.63E-54 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_21380 644db494369c7bc2ce3c25a87585c080 392 Gene3D G3DSA:2.30.40.10 73 389 2.6E-46 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 Gene3D G3DSA:3.30.70.870 321 603 1.2E-121 T 14-10-2018 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 Pfam PF00679 Elongation factor G C-terminus 410 493 4.2E-23 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PACID_27450 893974364e12eea7a1ced564d241a7e1 620 SUPERFAMILY SSF54980 316 401 1.73E-10 T 14-10-2018 IPR035647 EF-G domain III/V-like PACID_27450 893974364e12eea7a1ced564d241a7e1 620 SUPERFAMILY SSF52540 5 183 2.74E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27450 893974364e12eea7a1ced564d241a7e1 620 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 612 7.0E-273 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 Gene3D G3DSA:2.40.50.250 496 611 1.2E-121 T 14-10-2018 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 Gene3D G3DSA:3.40.50.300 4 212 1.5E-59 T 14-10-2018 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 Pfam PF00009 Elongation factor Tu GTP binding domain 6 209 2.5E-54 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 Pfam PF03144 Elongation factor Tu domain 2 233 303 3.6E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 149 1.3E-23 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 Gene3D G3DSA:3.30.70.240 403 495 1.2E-121 T 14-10-2018 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 SUPERFAMILY SSF50447 196 315 2.59E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_27450 893974364e12eea7a1ced564d241a7e1 620 SUPERFAMILY SSF54980 412 525 1.87E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like PACID_27450 893974364e12eea7a1ced564d241a7e1 620 SMART SM00838 409 497 0.0031 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like PACID_27450 893974364e12eea7a1ced564d241a7e1 620 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.4E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 PRINTS PR00315 GTP-binding elongation factor signature 53 61 1.4E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.4E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 PRINTS PR00315 GTP-binding elongation factor signature 9 22 1.4E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.4E-15 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 PACID_27450 893974364e12eea7a1ced564d241a7e1 620 Gene3D G3DSA:2.40.30.10 214 313 2.6E-28 T 14-10-2018 PACID_06650 353c02bb9e397eeaec1ea9a5f5bf5a53 483 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 30 441 2.4E-81 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PACID_06650 353c02bb9e397eeaec1ea9a5f5bf5a53 483 Gene3D G3DSA:1.20.1720.10 29 214 1.5E-53 T 14-10-2018 PACID_06650 353c02bb9e397eeaec1ea9a5f5bf5a53 483 Gene3D G3DSA:1.20.1250.20 277 479 1.8E-17 T 14-10-2018 PACID_06650 353c02bb9e397eeaec1ea9a5f5bf5a53 483 PRINTS PR01036 Tetracycline resistance protein TetB signature 31 55 6.6E-5 T 14-10-2018 PACID_06650 353c02bb9e397eeaec1ea9a5f5bf5a53 483 PRINTS PR01036 Tetracycline resistance protein TetB signature 122 142 6.6E-5 T 14-10-2018 PACID_06650 353c02bb9e397eeaec1ea9a5f5bf5a53 483 PRINTS PR01036 Tetracycline resistance protein TetB signature 152 176 6.6E-5 T 14-10-2018 PACID_06650 353c02bb9e397eeaec1ea9a5f5bf5a53 483 Pfam PF07690 Major Facilitator Superfamily 32 428 4.3E-55 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_06650 353c02bb9e397eeaec1ea9a5f5bf5a53 483 SUPERFAMILY SSF103473 8 477 5.89E-74 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 PRINTS PR00599 Methionine aminopeptidase-1 signature 100 116 5.6E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 PRINTS PR00599 Methionine aminopeptidase-1 signature 78 91 5.6E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 PRINTS PR00599 Methionine aminopeptidase-1 signature 172 184 5.6E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 PRINTS PR00599 Methionine aminopeptidase-1 signature 203 215 5.6E-20 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 7 260 1.3E-77 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 Hamap MF_01974 Methionine aminopeptidase [map]. 7 261 35.817 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 Pfam PF00557 Metallopeptidase family M24 17 252 3.5E-44 T 14-10-2018 IPR000994 Peptidase M24 PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 SUPERFAMILY SSF55920 7 259 1.44E-73 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 178 196 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 PACID_25420 2429d53592ec6c3a1d62b7bbff1910eb 279 Gene3D G3DSA:3.90.230.10 1 266 1.5E-87 T 14-10-2018 PACID_09830 984a52566f58ed3383cb8609a037040d 420 SMART SM00220 22 262 1.0E-31 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_09830 984a52566f58ed3383cb8609a037040d 420 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 28 51 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 PACID_09830 984a52566f58ed3383cb8609a037040d 420 SUPERFAMILY SSF56112 13 262 3.37E-53 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_09830 984a52566f58ed3383cb8609a037040d 420 Gene3D G3DSA:1.10.510.10 68 264 4.1E-38 T 14-10-2018 PACID_09830 984a52566f58ed3383cb8609a037040d 420 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 136 148 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PACID_09830 984a52566f58ed3383cb8609a037040d 420 Gene3D G3DSA:3.30.200.20 12 67 1.8E-8 T 14-10-2018 PACID_09830 984a52566f58ed3383cb8609a037040d 420 Pfam PF00069 Protein kinase domain 22 223 8.0E-38 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 Pfam PF07478 D-ala D-ala ligase C-terminus 168 376 1.1E-67 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 PIRSF PIRSF039102 23 385 2.1E-106 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 26 379 2.2E-99 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 SUPERFAMILY SSF56059 161 381 3.54E-54 T 14-10-2018 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 Gene3D G3DSA:3.30.1490.20 176 247 1.2E-73 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 Gene3D G3DSA:3.30.470.20 150 382 1.2E-73 T 14-10-2018 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 SUPERFAMILY SSF52440 26 160 5.47E-32 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PACID_20480 65e858f42252df7a01d3689430b57bb3 387 Pfam PF01820 D-ala D-ala ligase N-terminus 26 151 1.6E-26 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 128 139 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 322 350 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 25 380 39.466 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_20480 65e858f42252df7a01d3689430b57bb3 387 Gene3D G3DSA:3.40.50.20 22 149 7.9E-32 T 14-10-2018 PACID_25600 e15b9ea302814802d159ae593b879129 828 SUPERFAMILY SSF52540 510 803 1.59E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25600 e15b9ea302814802d159ae593b879129 828 SUPERFAMILY SSF52540 16 466 1.43E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25600 e15b9ea302814802d159ae593b879129 828 Gene3D G3DSA:3.40.50.300 515 826 1.6E-107 T 14-10-2018 PACID_25600 e15b9ea302814802d159ae593b879129 828 SMART SM00382 35 460 0.56 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_25600 e15b9ea302814802d159ae593b879129 828 SMART SM00382 526 798 0.0077 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_25600 e15b9ea302814802d159ae593b879129 828 Gene3D G3DSA:1.10.8.280 185 297 3.1E-85 T 14-10-2018 PACID_25600 e15b9ea302814802d159ae593b879129 828 ProSitePatterns PS00211 ABC transporters family signature. 721 735 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_25600 e15b9ea302814802d159ae593b879129 828 Gene3D G3DSA:1.20.1580.10 583 721 1.6E-107 T 14-10-2018 PACID_25600 e15b9ea302814802d159ae593b879129 828 Gene3D G3DSA:3.40.50.300 18 101 9.1E-41 T 14-10-2018 PACID_25600 e15b9ea302814802d159ae593b879129 828 Gene3D G3DSA:3.40.50.300 389 491 3.1E-85 T 14-10-2018 PACID_25600 e15b9ea302814802d159ae593b879129 828 Gene3D G3DSA:1.20.1580.10 102 134 9.1E-41 T 14-10-2018 PACID_25600 e15b9ea302814802d159ae593b879129 828 Gene3D G3DSA:1.20.1580.10 146 388 3.1E-85 T 14-10-2018 PACID_18550 2f72d5998f1a03aa4f6204e5955cefb1 547 SMART SM00382 357 536 4.7E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_18550 2f72d5998f1a03aa4f6204e5955cefb1 547 SMART SM00382 31 219 3.4E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_18550 2f72d5998f1a03aa4f6204e5955cefb1 547 SUPERFAMILY SSF52540 9 228 1.78E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_18550 2f72d5998f1a03aa4f6204e5955cefb1 547 Pfam PF00005 ABC transporter 358 490 5.8E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_18550 2f72d5998f1a03aa4f6204e5955cefb1 547 SUPERFAMILY SSF52540 355 536 2.8E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_18550 2f72d5998f1a03aa4f6204e5955cefb1 547 Pfam PF00005 ABC transporter 26 174 2.8E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_18550 2f72d5998f1a03aa4f6204e5955cefb1 547 Gene3D G3DSA:3.40.50.300 352 543 8.8E-33 T 14-10-2018 PACID_18550 2f72d5998f1a03aa4f6204e5955cefb1 547 Gene3D G3DSA:3.40.50.300 4 272 9.1E-48 T 14-10-2018 PACID_18690 aa4581b4a92f0a55a912ba1cd547b5ad 399 Pfam PF00999 Sodium/hydrogen exchanger family 17 390 4.2E-37 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PACID_18690 aa4581b4a92f0a55a912ba1cd547b5ad 399 Gene3D G3DSA:1.20.1530.20 8 397 3.8E-52 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily PACID_10690 9e02c41fafe56f05e763b0e69d4d037a 93 SUPERFAMILY SSF143011 10 93 2.35E-14 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PACID_10690 9e02c41fafe56f05e763b0e69d4d037a 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 5.4E-18 T 14-10-2018 IPR007711 Toxin HigB-1 PACID_10690 9e02c41fafe56f05e763b0e69d4d037a 93 Gene3D G3DSA:3.30.2310.20 1 93 1.3E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PACID_10760 9e02c41fafe56f05e763b0e69d4d037a 93 SUPERFAMILY SSF143011 10 93 2.35E-14 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PACID_10760 9e02c41fafe56f05e763b0e69d4d037a 93 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 93 5.4E-18 T 14-10-2018 IPR007711 Toxin HigB-1 PACID_10760 9e02c41fafe56f05e763b0e69d4d037a 93 Gene3D G3DSA:3.30.2310.20 1 93 1.3E-23 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PACID_24880 ba9dbae195b15850b52c738675335307 103 Gene3D G3DSA:1.20.59.10 1 102 9.5E-42 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PACID_24880 ba9dbae195b15850b52c738675335307 103 Pfam PF01817 Chorismate mutase type II 12 87 1.3E-18 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PACID_24880 ba9dbae195b15850b52c738675335307 103 SUPERFAMILY SSF48600 4 91 1.68E-25 T 14-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PACID_24880 ba9dbae195b15850b52c738675335307 103 SMART SM00830 12 92 3.0E-23 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 PACID_24880 ba9dbae195b15850b52c738675335307 103 TIGRFAM TIGR01795 CM_mono_cladeE: chorismate mutase 5 96 3.3E-45 T 14-10-2018 IPR010951 Chorismate mutase, bacteria PACID_30320 422b31f663e96498f32f28f73d70e10e 336 Gene3D G3DSA:3.30.360.10 124 333 9.0E-46 T 14-10-2018 PACID_30320 422b31f663e96498f32f28f73d70e10e 336 SUPERFAMILY SSF55347 130 306 2.94E-24 T 14-10-2018 PACID_30320 422b31f663e96498f32f28f73d70e10e 336 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 44 122 1.6E-12 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_30320 422b31f663e96498f32f28f73d70e10e 336 SUPERFAMILY SSF51735 2 151 9.95E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30320 422b31f663e96498f32f28f73d70e10e 336 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 139 229 5.7E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_30320 422b31f663e96498f32f28f73d70e10e 336 Gene3D G3DSA:3.40.50.720 1 121 5.9E-20 T 14-10-2018 PACID_03030 e8cc1234dfc3fbb8aee6d6d85d0215d2 356 SUPERFAMILY SSF51658 1 352 1.9E-80 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_03030 e8cc1234dfc3fbb8aee6d6d85d0215d2 356 PIRSF PIRSF016049 1 356 1.2E-111 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 PACID_03030 e8cc1234dfc3fbb8aee6d6d85d0215d2 356 Gene3D G3DSA:3.20.20.150 1 356 1.1E-138 T 14-10-2018 PACID_03030 e8cc1234dfc3fbb8aee6d6d85d0215d2 356 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 354 8.7E-111 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 PACID_03030 e8cc1234dfc3fbb8aee6d6d85d0215d2 356 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 353 3.9E-135 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 PACID_03030 e8cc1234dfc3fbb8aee6d6d85d0215d2 356 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 356 156.566 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 PACID_12110 3d19df1cd4ed4a819f3bc82357bb1671 667 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 362 604 4.5E-62 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 Gene3D G3DSA:3.40.50.300 18 447 1.4E-148 T 14-10-2018 PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 Gene3D G3DSA:1.20.1580.10 103 347 1.4E-148 T 14-10-2018 PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 Gene3D G3DSA:1.10.8.280 157 269 1.4E-148 T 14-10-2018 PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 Gene3D G3DSA:1.20.1580.10 555 593 4.6E-92 T 14-10-2018 PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 SUPERFAMILY SSF52540 468 739 6.99E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 SUPERFAMILY SSF52540 16 430 6.43E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 Gene3D G3DSA:3.40.50.300 473 761 4.6E-92 T 14-10-2018 PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 SMART SM00382 487 733 0.48 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_26810 f0af98fa1b8710312249b08c0d9e6ce3 783 SMART SM00382 35 424 0.41 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_09850 2bc9e24d4c7494eb2543b456a81fcde2 531 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 104 187 8.3E-11 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like PACID_09850 2bc9e24d4c7494eb2543b456a81fcde2 531 Pfam PF16192 C-terminal four TMM region of protein-O-mannosyltransferase 336 530 1.2E-11 T 14-10-2018 IPR032421 Protein O-mannosyl-transferase, C-terminal four TM domain KEGG: 00514+2.4.1.109|KEGG: 00515+2.4.1.109|MetaCyc: PWY-7921|MetaCyc: PWY-7922|MetaCyc: PWY-7979|Reactome: R-HSA-5173105 PACID_04180 71a2e7ececc676e4538a75a5101cdb56 162 SMART SM00354 9 80 2.1E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_04180 71a2e7ececc676e4538a75a5101cdb56 162 Gene3D G3DSA:1.10.260.40 3 63 1.4E-20 T 14-10-2018 PACID_04180 71a2e7ececc676e4538a75a5101cdb56 162 SUPERFAMILY SSF53822 69 157 3.64E-11 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_04180 71a2e7ececc676e4538a75a5101cdb56 162 SUPERFAMILY SSF47413 9 67 2.21E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_04180 71a2e7ececc676e4538a75a5101cdb56 162 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 70 161 2.0E-5 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain PACID_04180 71a2e7ececc676e4538a75a5101cdb56 162 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 56 3.0E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_04180 71a2e7ececc676e4538a75a5101cdb56 162 Gene3D G3DSA:3.40.50.2300 64 162 2.6E-14 T 14-10-2018 PACID_26840 40a09a38d11ecf73a54a3ec986d8030e 76 Gene3D G3DSA:3.40.50.1820 1 62 3.2E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_26840 40a09a38d11ecf73a54a3ec986d8030e 76 SUPERFAMILY SSF53474 1 60 7.34E-9 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_26840 40a09a38d11ecf73a54a3ec986d8030e 76 Pfam PF07859 alpha/beta hydrolase fold 1 36 4.5E-8 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PACID_34330 84074fae6c7c96ba7121043ce25a1b05 106 SUPERFAMILY SSF54211 16 83 3.29E-14 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_34330 84074fae6c7c96ba7121043ce25a1b05 106 Gene3D G3DSA:3.30.230.10 5 90 2.2E-14 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_34330 84074fae6c7c96ba7121043ce25a1b05 106 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 16 74 7.6E-12 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PACID_34330 84074fae6c7c96ba7121043ce25a1b05 106 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 27 41 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 PACID_34330 84074fae6c7c96ba7121043ce25a1b05 106 Pfam PF00825 Ribonuclease P 15 81 5.5E-16 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 PACID_10430 8a5bbfc964228211ec34b4c971dd86bd 273 Gene3D G3DSA:3.40.1180.10 25 273 5.6E-78 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 PACID_10430 8a5bbfc964228211ec34b4c971dd86bd 273 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 218 235 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 PACID_10430 8a5bbfc964228211ec34b4c971dd86bd 273 SUPERFAMILY SSF64005 38 268 5.75E-66 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 PACID_10430 8a5bbfc964228211ec34b4c971dd86bd 273 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 41 272 1.4E-56 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PACID_10430 8a5bbfc964228211ec34b4c971dd86bd 273 Pfam PF01255 Putative undecaprenyl diphosphate synthase 49 272 2.8E-65 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PACID_10430 8a5bbfc964228211ec34b4c971dd86bd 273 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 41 273 34.517 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 SUPERFAMILY SSF48150 24 234 4.87E-61 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 ProSitePatterns PS01155 Endonuclease III family signature. 119 148 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 210 226 5.4E-4 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 Pfam PF00633 Helix-hairpin-helix motif 117 145 2.1E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 Gene3D G3DSA:1.10.340.30 37 150 1.9E-63 T 14-10-2018 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 SMART SM00478 56 208 6.5E-27 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 SMART SM00525 209 229 0.0023 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 Gene3D G3DSA:1.10.1670.10 29 226 1.9E-63 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PACID_28220 af138dda10a9061ee81fbe10d1d8a6cf 305 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 52 175 5.0E-13 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PACID_14020 25d3e2979b789f4d89878219e29b8c0e 319 Gene3D G3DSA:1.10.3720.10 68 318 8.0E-56 T 14-10-2018 IPR035906 MetI-like superfamily PACID_14020 25d3e2979b789f4d89878219e29b8c0e 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 316 1.7E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_14020 25d3e2979b789f4d89878219e29b8c0e 319 SUPERFAMILY SSF161098 72 304 2.09E-43 T 14-10-2018 IPR035906 MetI-like superfamily PACID_18990 1a2c4151a6ea23a3666848cd9ba4c4cd 511 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 23 488 1.1E-173 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_18990 1a2c4151a6ea23a3666848cd9ba4c4cd 511 SUPERFAMILY SSF75304 10 487 7.59E-152 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_18990 1a2c4151a6ea23a3666848cd9ba4c4cd 511 ProSitePatterns PS00571 Amidases signature. 160 191 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 PACID_18990 1a2c4151a6ea23a3666848cd9ba4c4cd 511 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 19 488 86.611 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_18990 1a2c4151a6ea23a3666848cd9ba4c4cd 511 Gene3D G3DSA:3.90.1300.10 11 491 1.2E-177 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_18990 1a2c4151a6ea23a3666848cd9ba4c4cd 511 Pfam PF01425 Amidase 33 476 7.8E-146 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_05340 7f49fa51548d59bb4039b7935d9a04b5 549 PIRSF PIRSF006060 5 507 1.8E-61 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_05340 7f49fa51548d59bb4039b7935d9a04b5 549 Pfam PF13520 Amino acid permease 29 436 3.4E-39 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_05340 7f49fa51548d59bb4039b7935d9a04b5 549 Gene3D G3DSA:1.20.1740.10 23 461 2.4E-30 T 14-10-2018 PACID_04560 2cc5deae698d07b43a81c8cb0d81f09c 101 Pfam PF17249 Family of unknown function (DUF5318) 2 92 3.1E-28 T 14-10-2018 IPR035169 Protein of unknown function DUF5318 PACID_22730 996f8cfc6a3fb0dc7b6b9f9eccc3be55 192 Gene3D G3DSA:1.20.120.450 2 160 5.8E-27 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_22730 996f8cfc6a3fb0dc7b6b9f9eccc3be55 192 SUPERFAMILY SSF109854 1 156 6.11E-33 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_22730 996f8cfc6a3fb0dc7b6b9f9eccc3be55 192 Pfam PF04978 Protein of unknown function (DUF664) 7 157 5.4E-39 T 14-10-2018 IPR007061 Protein of unknown function DUF664 PACID_22690 914300c5aae3a0fb124739c699efa147 244 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 9 235 2.6E-55 T 14-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 PACID_22690 914300c5aae3a0fb124739c699efa147 244 SUPERFAMILY SSF100950 5 240 2.09E-58 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_22690 914300c5aae3a0fb124739c699efa147 244 Gene3D G3DSA:3.40.50.1360 1 237 1.2E-70 T 14-10-2018 PACID_22690 914300c5aae3a0fb124739c699efa147 244 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 227 1.2E-64 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 Gene3D G3DSA:3.50.50.60 120 242 8.7E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 Gene3D G3DSA:3.50.50.60 4 302 8.7E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 303 1.9E-117 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 133 153 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 SUPERFAMILY SSF51905 1 302 6.58E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 37 52 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 58 68 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 284 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 193 209 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 231 252 2.4E-74 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 2.2E-35 T 14-10-2018 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.2E-35 T 14-10-2018 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.2E-35 T 14-10-2018 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 256 278 2.2E-35 T 14-10-2018 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 229 245 2.2E-35 T 14-10-2018 PACID_05070 b8090f6f73f04c3c8be77733c2f3fe80 336 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 292 2.5E-47 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_02710 a3f3a386d80710e4c67d43781802ca6b 511 SUPERFAMILY SSF54862 1 467 3.14E-159 T 14-10-2018 PACID_02710 a3f3a386d80710e4c67d43781802ca6b 511 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 465 3.8E-230 T 14-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PACID_02710 a3f3a386d80710e4c67d43781802ca6b 511 Gene3D G3DSA:1.10.3650.10 358 437 9.9E-24 T 14-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PACID_02710 a3f3a386d80710e4c67d43781802ca6b 511 Pfam PF13247 4Fe-4S dicluster domain 175 271 6.8E-36 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_02710 a3f3a386d80710e4c67d43781802ca6b 511 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 438 1.8E-27 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 PACID_02710 a3f3a386d80710e4c67d43781802ca6b 511 Gene3D G3DSA:3.30.70.20 1 303 1.3E-97 T 14-10-2018 PACID_01780 6bede037ff30299ac505cce80884dfa2 451 Pfam PF11299 Protein of unknown function (DUF3100) 49 282 6.9E-87 T 14-10-2018 IPR021450 Protein of unknown function DUF3100 PACID_15180 f94ebce012296dece36bad81f7178a6e 261 Gene3D G3DSA:1.20.1270.240 82 249 2.5E-53 T 14-10-2018 PACID_15180 f94ebce012296dece36bad81f7178a6e 261 PIRSF PIRSF006221 2 261 1.1E-39 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 PACID_15180 f94ebce012296dece36bad81f7178a6e 261 Pfam PF03881 Fructosamine kinase 41 254 3.1E-25 T 14-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 PACID_15180 f94ebce012296dece36bad81f7178a6e 261 Gene3D G3DSA:1.10.510.10 60 225 2.5E-53 T 14-10-2018 PACID_15180 f94ebce012296dece36bad81f7178a6e 261 SUPERFAMILY SSF56112 4 249 2.04E-30 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_01810 7e7a8396b2623c02a0d46abeb4546e26 278 Gene3D G3DSA:3.40.390.50 4 118 2.8E-6 T 14-10-2018 PACID_01810 7e7a8396b2623c02a0d46abeb4546e26 278 Pfam PF06114 IrrE N-terminal-like domain 39 154 4.6E-12 T 14-10-2018 IPR010359 IrrE N-terminal-like domain PACID_20430 2fbe1f16fec36085aa83e33dde5f8462 229 Pfam PF05656 Protein of unknown function (DUF805) 92 212 2.5E-20 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 PACID_03680 285a1238de978259af845147859bbe9e 254 Gene3D G3DSA:3.30.450.40 81 244 3.9E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily PACID_03680 285a1238de978259af845147859bbe9e 254 SMART SM00346 9 100 2.8E-19 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PACID_03680 285a1238de978259af845147859bbe9e 254 Gene3D G3DSA:1.10.10.10 10 78 5.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_03680 285a1238de978259af845147859bbe9e 254 SUPERFAMILY SSF46785 11 81 2.41E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_03680 285a1238de978259af845147859bbe9e 254 SUPERFAMILY SSF55781 68 238 1.7E-33 T 14-10-2018 PACID_03680 285a1238de978259af845147859bbe9e 254 Pfam PF09339 IclR helix-turn-helix domain 14 62 5.9E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PACID_03680 285a1238de978259af845147859bbe9e 254 Pfam PF01614 Bacterial transcriptional regulator 128 238 3.2E-13 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal PACID_06010 436339ae190347658194fd69a724aa60 120 SUPERFAMILY SSF55174 3 84 2.49E-22 T 14-10-2018 PACID_06010 436339ae190347658194fd69a724aa60 120 SMART SM00363 2 64 7.9E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_06010 436339ae190347658194fd69a724aa60 120 Gene3D G3DSA:3.10.290.10 1 98 9.8E-29 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PACID_06010 436339ae190347658194fd69a724aa60 120 Pfam PF01479 S4 domain 3 48 1.3E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_06010 436339ae190347658194fd69a724aa60 120 PIRSF PIRSF016821 1 120 3.9E-39 T 14-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 SUPERFAMILY SSF52540 309 517 9.33E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 SMART SM00382 350 517 6.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 SMART SM00382 26 232 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 SUPERFAMILY SSF52540 2 233 5.33E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 Pfam PF12848 ABC transporter 230 302 8.5E-8 T 14-10-2018 IPR032781 ABC-transporter extension domain PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 Pfam PF00005 ABC transporter 343 471 5.7E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 Gene3D G3DSA:3.40.50.300 292 529 3.0E-54 T 14-10-2018 PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 Gene3D G3DSA:3.40.50.300 3 286 2.0E-55 T 14-10-2018 PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 Pfam PF00005 ABC transporter 17 187 6.6E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_22370 e1b3acc6f15e1caa7c56b4816fe4514c 532 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_25160 45108861646803e4c9ed233411519593 175 Pfam PF00380 Ribosomal protein S9/S16 53 175 2.6E-42 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 PACID_25160 45108861646803e4c9ed233411519593 175 SUPERFAMILY SSF54211 51 175 1.02E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_25160 45108861646803e4c9ed233411519593 175 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 44 175 32.144 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid PACID_25160 45108861646803e4c9ed233411519593 175 Gene3D G3DSA:3.30.230.10 48 175 4.3E-46 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_25160 45108861646803e4c9ed233411519593 175 ProSitePatterns PS00360 Ribosomal protein S9 signature. 113 131 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 PACID_14170 87979d811beef09537b34ad77387c480 299 SUPERFAMILY SSF103481 40 139 1.7E-7 T 14-10-2018 PACID_14170 87979d811beef09537b34ad77387c480 299 SUPERFAMILY SSF103481 186 287 1.06E-9 T 14-10-2018 PACID_14170 87979d811beef09537b34ad77387c480 299 Pfam PF00892 EamA-like transporter family 6 139 3.6E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_14170 87979d811beef09537b34ad77387c480 299 Pfam PF00892 EamA-like transporter family 149 282 8.4E-16 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_23120 8a485d607744dea9c74b75f27a575856 864 Gene3D G3DSA:1.10.390.60 222 480 3.0E-67 T 14-10-2018 PACID_23120 8a485d607744dea9c74b75f27a575856 864 Gene3D G3DSA:2.60.40.1730 87 206 3.1E-24 T 14-10-2018 PACID_23120 8a485d607744dea9c74b75f27a575856 864 Pfam PF01433 Peptidase family M1 domain 243 457 1.7E-58 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_23120 8a485d607744dea9c74b75f27a575856 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 306 321 7.7E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_23120 8a485d607744dea9c74b75f27a575856 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 325 337 7.7E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_23120 8a485d607744dea9c74b75f27a575856 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 272 282 7.7E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_23120 8a485d607744dea9c74b75f27a575856 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 188 203 7.7E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_23120 8a485d607744dea9c74b75f27a575856 864 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 139 154 7.7E-21 T 14-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 PACID_23120 8a485d607744dea9c74b75f27a575856 864 SUPERFAMILY SSF63737 14 205 1.7E-32 T 14-10-2018 PACID_23120 8a485d607744dea9c74b75f27a575856 864 TIGRFAM TIGR02412 pepN_strep_liv: aminopeptidase N 5 859 3.8E-279 T 14-10-2018 IPR012778 Peptidase M1, aminopeptidase GO:0004177|GO:0006508 KEGG: 00480+3.4.11.2 PACID_23120 8a485d607744dea9c74b75f27a575856 864 Pfam PF11838 ERAP1-like C-terminal domain 539 854 3.9E-46 T 14-10-2018 IPR024571 ERAP1-like C-terminal domain PACID_23120 8a485d607744dea9c74b75f27a575856 864 SUPERFAMILY SSF55486 225 468 1.11E-68 T 14-10-2018 PACID_26360 b85801851a776658398e85d525e8088d 449 SUPERFAMILY SSF142019 16 248 6.8E-84 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 SUPERFAMILY SSF142984 251 332 5.75E-21 T 14-10-2018 PACID_26360 b85801851a776658398e85d525e8088d 449 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 18 421 2.1E-184 T 14-10-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 Pfam PF10531 SLBB domain 253 300 6.7E-9 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 Gene3D G3DSA:3.40.50.11540 62 240 3.3E-76 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 57 228 1.6E-46 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 350 361 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 176 191 - T 14-10-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 Gene3D G3DSA:1.20.1440.230 335 428 7.5E-31 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 Gene3D G3DSA:3.10.20.600 241 334 1.8E-26 T 14-10-2018 PACID_26360 b85801851a776658398e85d525e8088d 449 SUPERFAMILY SSF140490 334 424 1.29E-32 T 14-10-2018 IPR037207 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 SMART SM00928 337 382 9.6E-27 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26360 b85801851a776658398e85d525e8088d 449 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 1.7E-29 T 14-10-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_18150 85556a7787154771c75a02a30af0a067 427 Gene3D G3DSA:3.40.190.10 144 411 7.2E-51 T 14-10-2018 PACID_18150 85556a7787154771c75a02a30af0a067 427 Gene3D G3DSA:3.40.190.10 53 353 7.2E-51 T 14-10-2018 PACID_18150 85556a7787154771c75a02a30af0a067 427 SUPERFAMILY SSF53850 33 423 1.29E-39 T 14-10-2018 PACID_18150 85556a7787154771c75a02a30af0a067 427 Pfam PF13416 Bacterial extracellular solute-binding protein 53 357 9.2E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_19660 ca0a3df46ac52ec53a25a4b7e62fa679 373 Pfam PF03462 PCRF domain 27 215 8.2E-56 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 PACID_19660 ca0a3df46ac52ec53a25a4b7e62fa679 373 SUPERFAMILY SSF75620 26 363 2.75E-115 T 14-10-2018 PACID_19660 ca0a3df46ac52ec53a25a4b7e62fa679 373 Gene3D G3DSA:3.30.160.20 222 302 1.8E-88 T 14-10-2018 PACID_19660 ca0a3df46ac52ec53a25a4b7e62fa679 373 SMART SM00937 79 190 2.2E-43 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 PACID_19660 ca0a3df46ac52ec53a25a4b7e62fa679 373 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 239 255 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PACID_19660 ca0a3df46ac52ec53a25a4b7e62fa679 373 Pfam PF00472 RF-1 domain 225 332 5.3E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PACID_19660 ca0a3df46ac52ec53a25a4b7e62fa679 373 Gene3D G3DSA:3.30.70.1660 122 350 1.8E-88 T 14-10-2018 PACID_19660 ca0a3df46ac52ec53a25a4b7e62fa679 373 Gene3D G3DSA:1.20.58.410 20 109 4.7E-5 T 14-10-2018 PACID_11810 e2d4563afce179a2d12a4d4d19fec253 294 Pfam PF02628 Cytochrome oxidase assembly protein 68 189 3.9E-8 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 155 167 - T 14-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 149 3.5E-31 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 SUPERFAMILY SSF56327 156 323 6.64E-61 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 TIGRFAM TIGR01759 MalateDH-SF1: malate dehydrogenase 4 321 3.3E-142 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 Gene3D G3DSA:3.40.50.720 1 154 6.9E-50 T 14-10-2018 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 PIRSF PIRSF000102 2 326 1.1E-59 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 Gene3D G3DSA:3.90.110.10 155 327 2.9E-65 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 SUPERFAMILY SSF51735 3 151 4.06E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 156 323 2.3E-34 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 PACID_24560 f1e2a9e3d2d635c0958b732ba358e3cf 327 Hamap MF_01517 Malate dehydrogenase [mdh]. 2 325 52.925 T 14-10-2018 IPR010945 Malate dehydrogenase, type 2 GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 PACID_29320 fbab9d681518b593b1fe93cb921c5a6a 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 141 332 2.0E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_29320 fbab9d681518b593b1fe93cb921c5a6a 334 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 48 87 9.3E-8 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PACID_29320 fbab9d681518b593b1fe93cb921c5a6a 334 SUPERFAMILY SSF161098 120 306 7.98E-24 T 14-10-2018 IPR035906 MetI-like superfamily PACID_29320 fbab9d681518b593b1fe93cb921c5a6a 334 Gene3D G3DSA:1.10.3720.10 112 334 2.7E-24 T 14-10-2018 IPR035906 MetI-like superfamily PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 SUPERFAMILY SSF47384 264 348 3.53E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 SMART SM00304 221 273 3.1E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 Gene3D G3DSA:1.10.287.130 276 351 1.1E-19 T 14-10-2018 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 Pfam PF00672 HAMP domain 221 270 2.6E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 Pfam PF00512 His Kinase A (phospho-acceptor) domain 282 348 1.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 SMART SM00387 393 504 1.0E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 447 457 4.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 501 4.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 482 4.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 443 4.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 Gene3D G3DSA:1.20.1480.50 187 275 9.4E-11 T 14-10-2018 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 SUPERFAMILY SSF158472 221 271 4.32E-8 T 14-10-2018 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 SUPERFAMILY SSF55874 338 505 2.1E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 Gene3D G3DSA:3.30.565.10 354 507 2.8E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 SMART SM00388 281 348 4.8E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_20260 21f2eed70d0084b1abbb80b715cf7633 540 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 394 502 2.9E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_11960 398bb0da4528982e52f0902e2347d514 430 Pfam PF12821 Threonine/Serine exporter, ThrE 284 409 2.4E-19 T 14-10-2018 IPR024528 Threonine/Serine exporter, ThrE PACID_11960 398bb0da4528982e52f0902e2347d514 430 Pfam PF06738 Putative threonine/serine exporter 17 259 8.1E-52 T 14-10-2018 IPR010619 Putative threonine/serine exporter PACID_05570 bed60716ca8f909cf6377f79f123fb23 442 SUPERFAMILY SSF55031 240 350 2.44E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PACID_05570 bed60716ca8f909cf6377f79f123fb23 442 PIRSF PIRSF001235 21 440 4.5E-116 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 PACID_05570 bed60716ca8f909cf6377f79f123fb23 442 Gene3D G3DSA:3.30.70.360 240 352 1.6E-123 T 14-10-2018 PACID_05570 bed60716ca8f909cf6377f79f123fb23 442 Gene3D G3DSA:3.40.630.10 40 427 1.6E-123 T 14-10-2018 PACID_05570 bed60716ca8f909cf6377f79f123fb23 442 Pfam PF01546 Peptidase family M20/M25/M40 94 433 2.3E-24 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PACID_05570 bed60716ca8f909cf6377f79f123fb23 442 SUPERFAMILY SSF53187 24 437 1.34E-72 T 14-10-2018 PACID_05570 bed60716ca8f909cf6377f79f123fb23 442 Pfam PF07687 Peptidase dimerisation domain 240 335 1.7E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_05570 bed60716ca8f909cf6377f79f123fb23 442 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 40 436 4.5E-101 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 PACID_09500 14683dff9caaf3e2fb74e59b7cc31dd6 199 Gene3D G3DSA:3.40.430.10 5 180 3.3E-27 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_09500 14683dff9caaf3e2fb74e59b7cc31dd6 199 Pfam PF01872 RibD C-terminal domain 6 175 1.6E-17 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PACID_09500 14683dff9caaf3e2fb74e59b7cc31dd6 199 SUPERFAMILY SSF53597 6 183 8.18E-20 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 Gene3D G3DSA:3.20.20.80 1 271 4.9E-97 T 14-10-2018 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 ProSitePatterns PS01182 Glycosyl hydrolases family 35 putative active site. 147 159 - T 14-10-2018 IPR019801 Glycoside hydrolase, family 35, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PIRSF PIRSF006336 1 582 1.3E-164 T 14-10-2018 IPR026283 Beta-galactosidase 1-like GO:0004565 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 SUPERFAMILY SSF51445 4 326 2.11E-96 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PRINTS PR00742 Glycosyl hydrolase family 35 signature 231 246 4.2E-53 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PRINTS PR00742 Glycosyl hydrolase family 35 signature 293 309 4.2E-53 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PRINTS PR00742 Glycosyl hydrolase family 35 signature 528 544 4.2E-53 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PRINTS PR00742 Glycosyl hydrolase family 35 signature 14 31 4.2E-53 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PRINTS PR00742 Glycosyl hydrolase family 35 signature 90 109 4.2E-53 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PRINTS PR00742 Glycosyl hydrolase family 35 signature 145 160 4.2E-53 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PRINTS PR00742 Glycosyl hydrolase family 35 signature 267 282 4.2E-53 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 PRINTS PR00742 Glycosyl hydrolase family 35 signature 35 53 4.2E-53 T 14-10-2018 IPR001944 Glycoside hydrolase, family 35 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 SUPERFAMILY SSF49785 437 572 4.53E-16 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 Pfam PF01301 Glycosyl hydrolases family 35 11 323 7.8E-108 T 14-10-2018 IPR031330 Glycoside hydrolase 35, catalytic domain KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 Gene3D G3DSA:2.60.120.260 346 482 2.5E-80 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_05380 5441820564c5fd24d828ec5dd53aeb18 591 Gene3D G3DSA:2.60.120.260 272 570 2.5E-80 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_04390 162df6f8fa360a5f3dddde969de0e3fa 175 Gene3D G3DSA:3.40.630.30 2 174 1.3E-54 T 14-10-2018 PACID_04390 162df6f8fa360a5f3dddde969de0e3fa 175 Pfam PF13420 Acetyltransferase (GNAT) domain 3 159 1.0E-19 T 14-10-2018 PACID_04390 162df6f8fa360a5f3dddde969de0e3fa 175 SUPERFAMILY SSF55729 3 171 9.95E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_12810 60044fd907f5e58617a3c8dbda401088 487 Gene3D G3DSA:3.40.1390.10 3 82 4.9E-21 T 14-10-2018 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 Pfam PF08245 Mur ligase middle domain 111 308 5.8E-38 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 Gene3D G3DSA:3.90.190.20 328 477 1.2E-34 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 Gene3D G3DSA:3.40.1190.10 83 325 3.4E-62 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 469 3.0E-107 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 SUPERFAMILY SSF53623 105 324 3.27E-47 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 SUPERFAMILY SSF63418 2 96 1.96E-20 T 14-10-2018 IPR035911 MurE/MurF, N-terminal PACID_12810 60044fd907f5e58617a3c8dbda401088 487 Pfam PF01225 Mur ligase family, catalytic domain 29 73 2.2E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 SUPERFAMILY SSF53244 330 470 2.75E-27 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 471 29.983 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 PACID_12810 60044fd907f5e58617a3c8dbda401088 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 418 1.2E-13 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PACID_20140 6fbe8febece77885a51a4436001d3850 610 Pfam PF00271 Helicase conserved C-terminal domain 255 364 1.9E-30 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_20140 6fbe8febece77885a51a4436001d3850 610 Gene3D G3DSA:3.40.50.300 21 232 3.1E-68 T 14-10-2018 PACID_20140 6fbe8febece77885a51a4436001d3850 610 SMART SM00487 39 247 1.4E-49 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_20140 6fbe8febece77885a51a4436001d3850 610 Pfam PF00270 DEAD/DEAH box helicase 44 215 1.1E-43 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_20140 6fbe8febece77885a51a4436001d3850 610 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 176 184 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site PACID_20140 6fbe8febece77885a51a4436001d3850 610 Gene3D G3DSA:3.40.50.300 246 408 4.5E-48 T 14-10-2018 PACID_20140 6fbe8febece77885a51a4436001d3850 610 SMART SM00490 283 364 4.9E-33 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_20140 6fbe8febece77885a51a4436001d3850 610 SUPERFAMILY SSF52540 97 384 6.76E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06550 abf8ea5a1cc3e0cf2db70c6a66f3be5b 479 Gene3D G3DSA:3.40.605.10 22 468 4.6E-170 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_06550 abf8ea5a1cc3e0cf2db70c6a66f3be5b 479 SUPERFAMILY SSF53720 3 475 1.44E-156 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_06550 abf8ea5a1cc3e0cf2db70c6a66f3be5b 479 Gene3D G3DSA:3.40.309.10 252 443 4.6E-170 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_06550 abf8ea5a1cc3e0cf2db70c6a66f3be5b 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PACID_06550 abf8ea5a1cc3e0cf2db70c6a66f3be5b 479 Pfam PF00171 Aldehyde dehydrogenase family 17 472 8.6E-160 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 SUPERFAMILY SSF51735 3 168 6.21E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 PIRSF PIRSF000149 1 333 5.9E-118 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 SUPERFAMILY SSF55347 152 314 1.26E-64 T 14-10-2018 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 Gene3D G3DSA:3.40.50.720 4 326 5.1E-133 T 14-10-2018 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.3E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 1.3E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.3E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.3E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.3E-32 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 2.9E-62 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 SMART SM00846 3 152 4.9E-74 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.3E-121 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 Gene3D G3DSA:3.30.360.10 151 315 5.1E-133 T 14-10-2018 PACID_09730 e99f9039232ebce82218eec99bbe6ca3 334 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.1E-31 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_24250 1b4a6ed962ef9b3746bd9a04d947a777 267 SUPERFAMILY SSF53613 3 263 1.71E-56 T 14-10-2018 IPR029056 Ribokinase-like PACID_24250 1b4a6ed962ef9b3746bd9a04d947a777 267 Gene3D G3DSA:3.40.1190.20 1 264 1.2E-68 T 14-10-2018 IPR029056 Ribokinase-like PACID_24250 1b4a6ed962ef9b3746bd9a04d947a777 267 Pfam PF08543 Phosphomethylpyrimidine kinase 13 252 5.6E-61 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 PACID_21620 69366be77f2f3b6c442dea7fcbd1de08 61 SUPERFAMILY SSF143800 2 59 1.71E-21 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21620 69366be77f2f3b6c442dea7fcbd1de08 61 TIGRFAM TIGR00009 L28: ribosomal protein bL28 2 56 5.4E-20 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_21620 69366be77f2f3b6c442dea7fcbd1de08 61 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 61 14.631 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_21620 69366be77f2f3b6c442dea7fcbd1de08 61 Gene3D G3DSA:2.30.170.40 3 59 4.3E-18 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21620 69366be77f2f3b6c442dea7fcbd1de08 61 Pfam PF00830 Ribosomal L28 family 4 57 2.4E-21 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_11580 e5fc77604839acbe2b54ce03e63f4212 414 Pfam PF00144 Beta-lactamase 14 391 4.9E-44 T 14-10-2018 IPR001466 Beta-lactamase-related PACID_11580 e5fc77604839acbe2b54ce03e63f4212 414 SUPERFAMILY SSF56601 4 390 4.55E-56 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_11580 e5fc77604839acbe2b54ce03e63f4212 414 Gene3D G3DSA:3.40.710.10 4 393 5.1E-62 T 14-10-2018 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 SUPERFAMILY SSF51445 142 524 1.14E-87 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 SMART SM00642 167 522 2.6E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 SUPERFAMILY SSF51011 541 638 3.05E-17 T 14-10-2018 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 Pfam PF00128 Alpha amylase, catalytic domain 186 276 3.0E-12 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 Pfam PF00128 Alpha amylase, catalytic domain 301 490 3.7E-9 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 PIRSF PIRSF000463 26 640 4.8E-77 T 14-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 Gene3D G3DSA:2.60.40.10 27 143 3.0E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 35 67 6.8E-6 T 14-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 SUPERFAMILY SSF81296 35 151 4.2E-19 T 14-10-2018 IPR014756 Immunoglobulin E-set PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 Gene3D G3DSA:3.20.20.80 156 522 9.4E-101 T 14-10-2018 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 543 639 1.2E-12 T 14-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 PACID_30710 bb087c099f4aa80cf17472d09d70e2d4 640 Gene3D G3DSA:2.60.40.1180 538 639 4.5E-18 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_24870 0c5dcf0c714ad37939b15ee51bd35e01 207 PIRSF PIRSF000441 29 205 5.0E-72 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PACID_24870 0c5dcf0c714ad37939b15ee51bd35e01 207 Gene3D G3DSA:2.160.10.10 100 205 6.7E-31 T 14-10-2018 PACID_24870 0c5dcf0c714ad37939b15ee51bd35e01 207 SUPERFAMILY SSF51161 28 198 9.98E-48 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_24870 0c5dcf0c714ad37939b15ee51bd35e01 207 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 37 198 4.1E-66 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 PACID_24870 0c5dcf0c714ad37939b15ee51bd35e01 207 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 159 187 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PACID_24870 0c5dcf0c714ad37939b15ee51bd35e01 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 150 183 1.2E-8 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_24870 0c5dcf0c714ad37939b15ee51bd35e01 207 Gene3D G3DSA:1.10.3130.10 3 99 4.4E-21 T 14-10-2018 PACID_27810 2c90dee42292788c5bf46bbc5906fb14 374 SUPERFAMILY SSF81345 45 367 1.7E-63 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_27810 2c90dee42292788c5bf46bbc5906fb14 374 Pfam PF01032 FecCD transport family 61 367 6.4E-72 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PACID_27810 2c90dee42292788c5bf46bbc5906fb14 374 Gene3D G3DSA:1.10.3470.10 47 372 3.8E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Gene3D G3DSA:2.40.30.170 398 474 1.3E-26 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Pfam PF13437 HlyD family secretion protein 365 456 1.1E-4 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Gene3D G3DSA:1.10.287.470 93 137 4.3E-13 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Pfam PF13533 Biotin-lipoyl like 65 104 3.1E-11 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PACID_03570 0801930b58b1fffe0d38491c325e0881 576 SUPERFAMILY SSF111369 335 392 4.18E-5 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Gene3D G3DSA:1.10.287.470 256 363 1.3E-26 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Gene3D G3DSA:2.40.420.20 475 534 1.3E-26 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Gene3D G3DSA:2.40.50.100 59 92 4.3E-13 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Gene3D G3DSA:2.40.50.100 248 397 1.3E-26 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 Gene3D G3DSA:2.40.30.170 46 58 4.3E-13 T 14-10-2018 PACID_03570 0801930b58b1fffe0d38491c325e0881 576 SUPERFAMILY SSF111369 50 151 5.23E-6 T 14-10-2018 PACID_10050 0460c185e980b0240d90b93ac67b66cf 264 Gene3D G3DSA:3.30.2400.30 3 254 9.8E-75 T 14-10-2018 PACID_10050 0460c185e980b0240d90b93ac67b66cf 264 Pfam PF04454 Encapsulating protein for peroxidase 1 251 2.4E-79 T 14-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 PACID_10050 0460c185e980b0240d90b93ac67b66cf 264 PIRSF PIRSF019254 1 264 2.4E-82 T 14-10-2018 IPR007544 Encapsulating protein for peroxidase GO:0008233|GO:0042742 PACID_10050 0460c185e980b0240d90b93ac67b66cf 264 Gene3D G3DSA:3.30.2320.10 131 260 9.8E-75 T 14-10-2018 PACID_07380 b243cfcbdae51109b316104effb448b2 305 SUPERFAMILY SSF161098 68 295 4.97E-56 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07380 b243cfcbdae51109b316104effb448b2 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 297 7.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_07380 b243cfcbdae51109b316104effb448b2 305 Gene3D G3DSA:1.10.3720.10 64 304 3.1E-64 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07380 b243cfcbdae51109b316104effb448b2 305 SUPERFAMILY SSF160964 22 67 1.7E-6 T 14-10-2018 PACID_31720 7556c584f74f065f5beb9ce87e4f03f3 338 Pfam PF13596 PAS domain 24 150 7.0E-12 T 14-10-2018 PACID_31720 7556c584f74f065f5beb9ce87e4f03f3 338 Pfam PF13596 PAS domain 226 328 6.5E-17 T 14-10-2018 PACID_31720 7556c584f74f065f5beb9ce87e4f03f3 338 Gene3D G3DSA:3.30.450.20 6 163 4.3E-27 T 14-10-2018 PACID_31720 7556c584f74f065f5beb9ce87e4f03f3 338 Gene3D G3DSA:3.30.450.20 209 337 1.0E-26 T 14-10-2018 PACID_22040 8d2935b33e943e8473fca02e6e058d4e 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 6.5E-66 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 PACID_22040 8d2935b33e943e8473fca02e6e058d4e 185 SUPERFAMILY SSF55194 4 184 6.28E-69 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 PACID_22040 8d2935b33e943e8473fca02e6e058d4e 185 Gene3D G3DSA:1.10.132.20 12 182 5.7E-67 T 14-10-2018 PACID_22040 8d2935b33e943e8473fca02e6e058d4e 185 Gene3D G3DSA:3.30.1360.40 31 105 5.7E-67 T 14-10-2018 PACID_22040 8d2935b33e943e8473fca02e6e058d4e 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 26.93 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 PACID_22040 8d2935b33e943e8473fca02e6e058d4e 185 Pfam PF01765 Ribosome recycling factor 21 183 6.7E-62 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 PACID_27270 558cdc3595da018b3f6d40bee169ad29 225 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 4 203 1.9E-38 T 14-10-2018 PACID_27270 558cdc3595da018b3f6d40bee169ad29 225 PIRSF PIRSF001586 1 224 1.2E-78 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_27270 558cdc3595da018b3f6d40bee169ad29 225 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 4 219 8.6E-78 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_27270 558cdc3595da018b3f6d40bee169ad29 225 SUPERFAMILY SSF52317 3 217 3.47E-69 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_27270 558cdc3595da018b3f6d40bee169ad29 225 Gene3D G3DSA:3.40.50.880 1 222 2.8E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_27270 558cdc3595da018b3f6d40bee169ad29 225 SMART SM01211 2 221 1.1E-112 T 14-10-2018 PACID_27270 558cdc3595da018b3f6d40bee169ad29 225 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 3 219 37.617 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 PACID_02390 d4fb68a6fa00d99ae9075ce2e919934f 229 Gene3D G3DSA:2.60.120.10 12 149 7.1E-25 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_02390 d4fb68a6fa00d99ae9075ce2e919934f 229 SUPERFAMILY SSF46785 154 227 1.42E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_02390 d4fb68a6fa00d99ae9075ce2e919934f 229 SMART SM00100 21 139 3.2E-7 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PACID_02390 d4fb68a6fa00d99ae9075ce2e919934f 229 SUPERFAMILY SSF51206 17 147 4.19E-24 T 14-10-2018 IPR018490 Cyclic nucleotide-binding-like PACID_02390 d4fb68a6fa00d99ae9075ce2e919934f 229 Pfam PF13545 Crp-like helix-turn-helix domain 155 226 7.2E-16 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PACID_02390 d4fb68a6fa00d99ae9075ce2e919934f 229 Gene3D G3DSA:1.10.10.10 150 226 8.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_02390 d4fb68a6fa00d99ae9075ce2e919934f 229 SMART SM00419 171 219 8.7E-10 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 PACID_02390 d4fb68a6fa00d99ae9075ce2e919934f 229 Pfam PF00027 Cyclic nucleotide-binding domain 53 123 3.5E-11 T 14-10-2018 IPR000595 Cyclic nucleotide-binding domain PACID_09080 22920447fe3685647abd5ae9c8aa2077 193 SUPERFAMILY SSF103088 82 190 1.57E-26 T 14-10-2018 IPR036737 OmpA-like domain superfamily PACID_09080 22920447fe3685647abd5ae9c8aa2077 193 Gene3D G3DSA:3.30.1330.60 62 191 1.1E-28 T 14-10-2018 IPR036737 OmpA-like domain superfamily PACID_09080 22920447fe3685647abd5ae9c8aa2077 193 Pfam PF00691 OmpA family 90 184 1.4E-13 T 14-10-2018 IPR006665 OmpA-like domain PACID_09080 22920447fe3685647abd5ae9c8aa2077 193 PRINTS PR01021 OMPA domain signature 136 152 3.9E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PACID_09080 22920447fe3685647abd5ae9c8aa2077 193 PRINTS PR01021 OMPA domain signature 121 136 3.9E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PACID_09080 22920447fe3685647abd5ae9c8aa2077 193 PRINTS PR01021 OMPA domain signature 91 113 3.9E-7 T 14-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 PACID_04470 6584d15b92e627b0476e7a86af561d21 312 Gene3D G3DSA:3.30.200.20 31 118 1.2E-15 T 14-10-2018 PACID_04470 6584d15b92e627b0476e7a86af561d21 312 Pfam PF01636 Phosphotransferase enzyme family 54 276 3.4E-29 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PACID_04470 6584d15b92e627b0476e7a86af561d21 312 SUPERFAMILY SSF56112 50 284 3.27E-38 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_04470 6584d15b92e627b0476e7a86af561d21 312 Gene3D G3DSA:3.90.1200.10 184 307 4.4E-17 T 14-10-2018 PACID_11690 4f2f435ad99e5660552c7210aadf409c 401 Pfam PF00534 Glycosyl transferases group 1 197 348 4.5E-27 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_11690 4f2f435ad99e5660552c7210aadf409c 401 SUPERFAMILY SSF53756 7 395 1.49E-78 T 14-10-2018 PACID_11690 4f2f435ad99e5660552c7210aadf409c 401 Gene3D G3DSA:3.40.50.2000 14 392 2.9E-77 T 14-10-2018 PACID_11690 4f2f435ad99e5660552c7210aadf409c 401 Gene3D G3DSA:3.40.50.2000 179 376 2.9E-77 T 14-10-2018 PACID_11690 4f2f435ad99e5660552c7210aadf409c 401 TIGRFAM TIGR02149 glgA_Coryne: glycogen synthase, Corynebacterium family 7 394 6.5E-162 T 14-10-2018 IPR011875 Alpha-maltose-1-phosphate synthase GO:0009250|GO:0016740 KEGG: 00500+2.4.1.342|MetaCyc: PWY-7900 PACID_11690 4f2f435ad99e5660552c7210aadf409c 401 Pfam PF13439 Glycosyltransferase Family 4 21 183 2.0E-29 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_05780 16dd8cadd9c53eb70cff25e6c8953f58 342 Pfam PF05901 Excalibur calcium-binding domain 307 342 1.2E-14 T 14-10-2018 IPR008613 Excalibur calcium-binding domain PACID_05780 16dd8cadd9c53eb70cff25e6c8953f58 342 SMART SM00894 306 342 9.1E-21 T 14-10-2018 IPR008613 Excalibur calcium-binding domain PACID_05780 16dd8cadd9c53eb70cff25e6c8953f58 342 Pfam PF07510 Protein of unknown function (DUF1524) 104 240 1.3E-15 T 14-10-2018 IPR011089 Domain of unknown function DUF1524 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 SMART SM00436 119 207 1.2E-43 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Pfam PF13368 Topoisomerase C-terminal repeat 643 687 1.2E-7 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Pfam PF13368 Topoisomerase C-terminal repeat 696 774 3.0E-12 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Pfam PF13368 Topoisomerase C-terminal repeat 844 896 1.5E-22 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Pfam PF13368 Topoisomerase C-terminal repeat 780 831 9.3E-15 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Gene3D G3DSA:3.40.50.140 4 149 1.1E-55 T 14-10-2018 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Pfam PF01751 Toprim domain 7 128 1.0E-25 T 14-10-2018 IPR006171 TOPRIM domain PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Gene3D G3DSA:1.10.460.10 150 593 4.3E-166 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Pfam PF01131 DNA topoisomerase 143 590 3.6E-119 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 SMART SM00493 5 119 9.5E-36 T 14-10-2018 IPR006171 TOPRIM domain PACID_28880 e93c302cb93314d14e65321d68a93e29 953 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 177 195 2.6E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 399 415 2.6E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 322 331 2.6E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 516 530 2.6E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 93 106 2.6E-32 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Gene3D G3DSA:1.10.290.10 288 414 4.3E-166 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Hamap MF_00952 DNA topoisomerase 1 [topA]. 5 799 52.64 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 7 666 1.0E-231 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 SUPERFAMILY SSF56712 5 595 3.01E-174 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain PACID_28880 e93c302cb93314d14e65321d68a93e29 953 Gene3D G3DSA:2.70.20.10 199 500 4.3E-166 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 331 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 PACID_28880 e93c302cb93314d14e65321d68a93e29 953 SMART SM00437 280 553 6.6E-107 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 PACID_04990 a06ecc15c6bdc4995d8afcb3d0977fe8 391 Gene3D G3DSA:3.40.50.2000 19 210 1.8E-15 T 14-10-2018 PACID_04990 a06ecc15c6bdc4995d8afcb3d0977fe8 391 SUPERFAMILY SSF53756 5 386 8.37E-46 T 14-10-2018 PACID_04990 a06ecc15c6bdc4995d8afcb3d0977fe8 391 Pfam PF13579 Glycosyl transferase 4-like domain 51 189 1.6E-15 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_04990 a06ecc15c6bdc4995d8afcb3d0977fe8 391 Gene3D G3DSA:3.40.50.2000 211 372 1.2E-18 T 14-10-2018 PACID_04990 a06ecc15c6bdc4995d8afcb3d0977fe8 391 Pfam PF13692 Glycosyl transferases group 1 214 344 2.9E-14 T 14-10-2018 PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 Pfam PF14579 Helix-hairpin-helix motif 841 928 2.7E-23 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1066 0.0 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 Pfam PF02811 PHP domain 8 206 2.0E-44 T 14-10-2018 IPR004013 PHP domain GO:0003824 PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 Pfam PF01336 OB-fold nucleic acid binding domain 1030 1105 1.3E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 Gene3D G3DSA:3.20.20.140 1 301 2.9E-94 T 14-10-2018 PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 Gene3D G3DSA:1.10.10.1600 460 546 5.4E-20 T 14-10-2018 PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 SMART SM00481 7 80 3.2E-26 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 SUPERFAMILY SSF89550 6 295 6.28E-27 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PACID_18120 9e60b13c0b85fa88c778ac6ec33c6434 1189 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 327 767 4.8E-156 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_01080 48e11a925cf23190d21ec6ba1133165a 249 Pfam PF00005 ABC transporter 26 174 2.2E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_01080 48e11a925cf23190d21ec6ba1133165a 249 Gene3D G3DSA:3.40.50.300 10 249 1.7E-82 T 14-10-2018 PACID_01080 48e11a925cf23190d21ec6ba1133165a 249 PIRSF PIRSF039085 7 249 1.1E-115 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PACID_01080 48e11a925cf23190d21ec6ba1133165a 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_01080 48e11a925cf23190d21ec6ba1133165a 249 SUPERFAMILY SSF52540 11 244 1.86E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01080 48e11a925cf23190d21ec6ba1133165a 249 SMART SM00382 35 230 1.8E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_00280 d4afa2c2c3137e364c9eac09eb10d223 139 SUPERFAMILY SSF88723 1 128 9.16E-13 T 14-10-2018 IPR029060 PIN-like domain superfamily PACID_00280 d4afa2c2c3137e364c9eac09eb10d223 139 Pfam PF01850 PIN domain 3 118 6.3E-13 T 14-10-2018 IPR002716 PIN domain PACID_00280 d4afa2c2c3137e364c9eac09eb10d223 139 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 2 125 11.092 T 14-10-2018 IPR022907 VapC family GO:0004540 PACID_00280 d4afa2c2c3137e364c9eac09eb10d223 139 Gene3D G3DSA:3.40.50.1010 1 120 3.7E-10 T 14-10-2018 PACID_28990 0834b1d9aced600b44c4c6c745014a16 451 PIRSF PIRSF029347 42 448 1.6E-113 T 14-10-2018 IPR014555 RecF-like PACID_28990 0834b1d9aced600b44c4c6c745014a16 451 SUPERFAMILY SSF52540 47 395 2.84E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28990 0834b1d9aced600b44c4c6c745014a16 451 Gene3D G3DSA:3.40.50.300 43 120 2.0E-8 T 14-10-2018 PACID_28990 0834b1d9aced600b44c4c6c745014a16 451 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 65 196 2.3E-7 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_28990 0834b1d9aced600b44c4c6c745014a16 451 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 317 394 1.5E-16 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_28990 0834b1d9aced600b44c4c6c745014a16 451 Gene3D G3DSA:3.40.50.300 266 398 6.5E-10 T 14-10-2018 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 Gene3D G3DSA:1.20.120.1810 16 152 6.4E-44 T 14-10-2018 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 Pfam PF04545 Sigma-70, region 4 251 304 1.4E-11 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 PRINTS PR00046 Major sigma-70 factor signature 131 139 7.5E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 PRINTS PR00046 Major sigma-70 factor signature 255 267 7.5E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 PRINTS PR00046 Major sigma-70 factor signature 107 120 7.5E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 PRINTS PR00046 Major sigma-70 factor signature 276 291 7.5E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 PRINTS PR00046 Major sigma-70 factor signature 291 302 7.5E-22 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 78 304 3.2E-31 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 SUPERFAMILY SSF88659 156 228 1.83E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 Gene3D G3DSA:1.10.10.10 233 310 1.1E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 SUPERFAMILY SSF88659 214 306 2.62E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 Pfam PF00140 Sigma-70 factor, region 1.2 17 50 4.1E-11 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 Gene3D G3DSA:1.10.10.10 156 231 4.2E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 SUPERFAMILY SSF88946 17 153 1.44E-44 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 Pfam PF04539 Sigma-70 region 3 162 237 3.7E-22 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 PACID_16070 fcc5761e71227c5d721ca353d90d4567 312 Pfam PF04542 Sigma-70 region 2 83 152 5.7E-20 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 PACID_06210 39e494d36d8ef8775fc31bac9809b57e 646 PRINTS PR01806 Virulence factor MviN signature 387 413 6.9E-15 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PACID_06210 39e494d36d8ef8775fc31bac9809b57e 646 PRINTS PR01806 Virulence factor MviN signature 151 170 6.9E-15 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PACID_06210 39e494d36d8ef8775fc31bac9809b57e 646 PRINTS PR01806 Virulence factor MviN signature 170 186 6.9E-15 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PACID_06210 39e494d36d8ef8775fc31bac9809b57e 646 PRINTS PR01806 Virulence factor MviN signature 270 291 6.9E-15 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PACID_06210 39e494d36d8ef8775fc31bac9809b57e 646 PRINTS PR01806 Virulence factor MviN signature 246 270 6.9E-15 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PACID_06210 39e494d36d8ef8775fc31bac9809b57e 646 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 119 635 5.7E-73 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PACID_06210 39e494d36d8ef8775fc31bac9809b57e 646 Pfam PF03023 MviN-like protein 149 590 1.5E-70 T 14-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ PACID_18870 3a0e026202fea0d1005e6168c2a373d7 119 SUPERFAMILY SSF46785 10 91 1.57E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_18870 3a0e026202fea0d1005e6168c2a373d7 119 SMART SM00418 13 91 1.4E-27 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_18870 3a0e026202fea0d1005e6168c2a373d7 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 4.5E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_18870 3a0e026202fea0d1005e6168c2a373d7 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 4.5E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_18870 3a0e026202fea0d1005e6168c2a373d7 119 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 4.5E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_18870 3a0e026202fea0d1005e6168c2a373d7 119 Gene3D G3DSA:1.10.10.10 1 89 4.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18870 3a0e026202fea0d1005e6168c2a373d7 119 Pfam PF01022 Bacterial regulatory protein, arsR family 20 64 3.6E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 SUPERFAMILY SSF54999 5 102 1.31E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.036 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 9.9E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 9.9E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 9.9E-21 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.9E-36 T 14-10-2018 IPR027486 Ribosomal protein S10 domain PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 SMART SM01403 7 101 3.3E-59 T 14-10-2018 IPR027486 Ribosomal protein S10 domain PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 2.0E-47 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 Gene3D G3DSA:3.30.70.600 2 103 1.9E-38 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily PACID_25770 521ea46ef6e2ffa477b8e2bf5bcd4630 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_06180 c48fc92b00e2c08bf1bb20999f76f145 339 Gene3D G3DSA:3.40.50.720 3 161 4.6E-42 T 14-10-2018 PACID_06180 c48fc92b00e2c08bf1bb20999f76f145 339 SUPERFAMILY SSF55347 136 298 2.13E-34 T 14-10-2018 PACID_06180 c48fc92b00e2c08bf1bb20999f76f145 339 Gene3D G3DSA:3.30.360.10 162 333 4.4E-47 T 14-10-2018 PACID_06180 c48fc92b00e2c08bf1bb20999f76f145 339 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 126 2.0E-19 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_06180 c48fc92b00e2c08bf1bb20999f76f145 339 SUPERFAMILY SSF51735 3 161 8.02E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_18040 fa23150098dc8934061c4103f5fd459f 183 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 111 146 - T 14-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 1 148 4.8E-46 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 1 152 40.557 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 Gene3D G3DSA:3.30.420.10 1 155 3.0E-42 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 81 97 4.4E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 137 149 4.4E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 59 75 4.4E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 105 124 4.4E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 1 14 4.4E-30 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PACID_18040 fa23150098dc8934061c4103f5fd459f 183 SUPERFAMILY SSF53098 1 153 4.05E-41 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_18040 fa23150098dc8934061c4103f5fd459f 183 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 1 149 1.2E-31 T 14-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 Gene3D G3DSA:3.40.50.720 14 304 2.5E-59 T 14-10-2018 PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 195 223 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 246 6.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 227 6.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 27 44 6.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 266 286 6.4E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 SUPERFAMILY SSF51735 25 304 1.53E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 186 303 5.5E-24 T 14-10-2018 PACID_00240 ff8b427f89e9ff4b25faf3008d363d25 305 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 163 3.7E-13 T 14-10-2018 PACID_34170 172fdbbf9f951432e044467c7282fb88 278 Pfam PF00392 Bacterial regulatory proteins, gntR family 50 113 4.7E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_34170 172fdbbf9f951432e044467c7282fb88 278 Pfam PF07702 UTRA domain 134 269 4.5E-34 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PACID_34170 172fdbbf9f951432e044467c7282fb88 278 SMART SM00866 133 270 2.4E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 PACID_34170 172fdbbf9f951432e044467c7282fb88 278 Gene3D G3DSA:3.40.1410.10 117 277 1.8E-43 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PACID_34170 172fdbbf9f951432e044467c7282fb88 278 SMART SM00345 54 113 1.6E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_34170 172fdbbf9f951432e044467c7282fb88 278 SUPERFAMILY SSF64288 101 275 8.32E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily PACID_34170 172fdbbf9f951432e044467c7282fb88 278 Gene3D G3DSA:1.10.10.10 38 114 5.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_34170 172fdbbf9f951432e044467c7282fb88 278 SUPERFAMILY SSF46785 43 117 1.32E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_27580 06b4792147286ca227ad86b8d79216f4 706 Pfam PF02503 Polyphosphate kinase middle domain 142 337 6.3E-64 T 14-10-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 SUPERFAMILY SSF56024 521 702 6.95E-61 T 14-10-2018 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 Pfam PF13089 Polyphosphate kinase N-terminal domain 27 134 5.1E-35 T 14-10-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 Gene3D G3DSA:3.30.870.10 521 705 3.8E-58 T 14-10-2018 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 26 697 4.0E-242 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 SUPERFAMILY SSF56024 342 516 2.92E-56 T 14-10-2018 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 SUPERFAMILY SSF143724 131 328 1.41E-60 T 14-10-2018 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 Hamap MF_00347 Polyphosphate kinase [ppk]. 24 703 28.164 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 Gene3D G3DSA:3.30.1840.10 19 328 5.1E-106 T 14-10-2018 IPR036830 Polyphosphate kinase middle domain superfamily KEGG: 00190+2.7.4.1 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 SUPERFAMILY SSF140356 25 129 4.32E-34 T 14-10-2018 IPR036832 Polyphosphate kinase N-terminal domain superfamily KEGG: 00190+2.7.4.1 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 Gene3D G3DSA:3.30.870.10 337 520 1.1E-72 T 14-10-2018 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 Pfam PF13090 Polyphosphate kinase C-terminal domain 350 696 3.2E-146 T 14-10-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 PACID_27580 06b4792147286ca227ad86b8d79216f4 706 PIRSF PIRSF015589 8 706 1.1E-262 T 14-10-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 PACID_02730 250993ee250bee8c93ac91df852edfff 238 SUPERFAMILY SSF103501 1 225 3.66E-64 T 14-10-2018 IPR036197 NarG-like superfamily PACID_02730 250993ee250bee8c93ac91df852edfff 238 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 9.4E-56 T 14-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 PACID_02730 250993ee250bee8c93ac91df852edfff 238 Pfam PF02665 Nitrate reductase gamma subunit 7 225 9.8E-81 T 14-10-2018 IPR023234 NarG-like domain PACID_02730 250993ee250bee8c93ac91df852edfff 238 Gene3D G3DSA:1.20.950.20 2 217 3.9E-72 T 14-10-2018 PACID_21110 d756fd4938fa1de903e275149e3e8fe5 238 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 26 202 2.9E-46 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PACID_21110 d756fd4938fa1de903e275149e3e8fe5 238 Gene3D G3DSA:3.40.225.10 13 235 7.7E-64 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PACID_21110 d756fd4938fa1de903e275149e3e8fe5 238 SMART SM01007 21 204 5.2E-61 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PACID_21110 d756fd4938fa1de903e275149e3e8fe5 238 SUPERFAMILY SSF53639 15 229 1.08E-60 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 615 672 5.0E-27 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 Pfam PF00204 DNA gyrase B 261 432 5.6E-61 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 39 683 3.5E-272 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 Gene3D G3DSA:3.40.50.670 442 683 1.8E-96 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 Gene3D G3DSA:3.30.565.10 36 249 1.8E-85 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 ProSitePatterns PS00177 DNA topoisomerase II signature. 465 473 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 SUPERFAMILY SSF54211 261 433 1.04E-55 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 Pfam PF01751 Toprim domain 462 573 1.3E-16 T 14-10-2018 IPR006171 TOPRIM domain PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 36 683 83.916 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 39 49 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 213 228 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 354 370 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 284 302 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 228 241 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 416 436 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 402 416 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 260 282 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 652 668 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 513 522 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR01159 DNA gyrase subunit B signature 636 648 4.6E-69 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 SUPERFAMILY SSF56719 437 678 5.23E-80 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 66 206 5.3E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 SMART SM00387 64 208 8.2E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 Gene3D G3DSA:3.30.230.10 259 440 8.4E-67 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 103 116 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 615 631 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 463 477 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 68 83 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 310 323 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 547 564 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 146 160 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 529 545 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 PRINTS PR00418 DNA topoisomerase II family signature 567 579 7.2E-66 T 14-10-2018 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 SMART SM00433 68 676 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 PACID_00100 0a08b46c1f5b06bd078a7b2a69904279 683 SUPERFAMILY SSF55874 39 245 6.02E-69 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_21400 6e4a7395c55191cac43f7e08a964541f 375 Gene3D G3DSA:3.40.50.1820 95 372 2.3E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_21400 6e4a7395c55191cac43f7e08a964541f 375 SUPERFAMILY SSF53474 126 373 1.38E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_21400 6e4a7395c55191cac43f7e08a964541f 375 Pfam PF00756 Putative esterase 134 309 1.4E-11 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 PACID_31880 75ddf29753683ef5ebff7d155ffabb55 440 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 6 286 7.4E-36 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PACID_31880 75ddf29753683ef5ebff7d155ffabb55 440 SUPERFAMILY SSF53649 2 420 1.45E-56 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PACID_31880 75ddf29753683ef5ebff7d155ffabb55 440 Gene3D G3DSA:3.40.720.10 1 436 4.9E-57 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PACID_18830 75c5503b6a170e06c5babdfe6544adc8 488 SUPERFAMILY SSF54495 35 83 8.26E-6 T 14-10-2018 IPR016135 Ubiquitin-conjugating enzyme/RWD-like PACID_18830 75c5503b6a170e06c5babdfe6544adc8 488 Pfam PF00899 ThiF family 267 460 3.3E-25 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 PACID_18830 75c5503b6a170e06c5babdfe6544adc8 488 Gene3D G3DSA:3.40.50.720 271 476 4.6E-28 T 14-10-2018 PACID_18830 75c5503b6a170e06c5babdfe6544adc8 488 SUPERFAMILY SSF69572 271 410 2.35E-28 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 PACID_30490 249fc240745a0658887cebef16b766a9 385 SUPERFAMILY SSF54631 262 369 9.66E-7 T 14-10-2018 PACID_30490 249fc240745a0658887cebef16b766a9 385 SMART SM00382 27 212 3.1E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_30490 249fc240745a0658887cebef16b766a9 385 Pfam PF00005 ABC transporter 19 163 4.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_30490 249fc240745a0658887cebef16b766a9 385 SUPERFAMILY SSF52540 2 239 8.38E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_30490 249fc240745a0658887cebef16b766a9 385 Gene3D G3DSA:3.40.50.300 1 290 9.4E-75 T 14-10-2018 PACID_30490 249fc240745a0658887cebef16b766a9 385 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_11600 a6522cd376d6197ed409772dbdf1714a 106 Gene3D G3DSA:3.30.70.20 2 106 1.1E-45 T 14-10-2018 PACID_11600 a6522cd376d6197ed409772dbdf1714a 106 Pfam PF00037 4Fe-4S binding domain 34 56 1.2E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_11600 a6522cd376d6197ed409772dbdf1714a 106 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_11600 a6522cd376d6197ed409772dbdf1714a 106 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.5E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PACID_11600 a6522cd376d6197ed409772dbdf1714a 106 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.5E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PACID_11600 a6522cd376d6197ed409772dbdf1714a 106 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.5E-17 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 PACID_11600 a6522cd376d6197ed409772dbdf1714a 106 SUPERFAMILY SSF54862 3 91 3.53E-21 T 14-10-2018 PACID_07510 2c695532a76ae19d7f7b9c11b8607f8c 38 Pfam PF01402 Ribbon-helix-helix protein, copG family 1 35 1.5E-9 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_26030 045e90f2165179f7ad60c17951337318 149 SUPERFAMILY SSF54637 16 146 1.29E-25 T 14-10-2018 IPR029069 HotDog domain superfamily PACID_26030 045e90f2165179f7ad60c17951337318 149 Gene3D G3DSA:3.10.129.10 10 149 1.4E-33 T 14-10-2018 PACID_26030 045e90f2165179f7ad60c17951337318 149 Pfam PF13452 N-terminal half of MaoC dehydratase 15 136 2.8E-18 T 14-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 PACID_26030 045e90f2165179f7ad60c17951337318 149 PIRSF PIRSF018072 8 149 6.7E-38 T 14-10-2018 IPR016709 Uncharacterised protein family UPF0336 PACID_01690 b9d50a8c8a766362d6a7bd93647333ba 329 Gene3D G3DSA:3.90.25.10 172 306 1.3E-105 T 14-10-2018 PACID_01690 b9d50a8c8a766362d6a7bd93647333ba 329 SUPERFAMILY SSF51735 1 323 1.78E-83 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_01690 b9d50a8c8a766362d6a7bd93647333ba 329 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 324 2.3E-100 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 PACID_01690 b9d50a8c8a766362d6a7bd93647333ba 329 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 253 6.8E-57 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PACID_01690 b9d50a8c8a766362d6a7bd93647333ba 329 Gene3D G3DSA:3.40.50.720 3 253 1.3E-105 T 14-10-2018 PACID_19200 e665c3969a9aadafc11314c28e44af98 237 Gene3D G3DSA:1.10.150.240 19 110 1.1E-50 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PACID_19200 e665c3969a9aadafc11314c28e44af98 237 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 209 4.1E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PACID_19200 e665c3969a9aadafc11314c28e44af98 237 SUPERFAMILY SSF56784 7 236 2.41E-38 T 14-10-2018 IPR036412 HAD-like superfamily PACID_19200 e665c3969a9aadafc11314c28e44af98 237 Gene3D G3DSA:3.40.50.1000 8 219 1.1E-50 T 14-10-2018 IPR023214 HAD superfamily PACID_19200 e665c3969a9aadafc11314c28e44af98 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 204 7.2E-11 T 14-10-2018 PACID_14270 609ffb886417cef87df5115f34043a49 205 Pfam PF12840 Helix-turn-helix domain 21 78 1.1E-12 T 14-10-2018 PACID_14270 609ffb886417cef87df5115f34043a49 205 Gene3D G3DSA:1.10.10.10 13 93 1.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_14270 609ffb886417cef87df5115f34043a49 205 SMART SM00418 21 134 2.5E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_14270 609ffb886417cef87df5115f34043a49 205 SUPERFAMILY SSF46785 12 77 2.27E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_12930 c11f5d11c7fd6664152ff6376565527b 144 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 113 137 - T 14-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site PACID_12930 c11f5d11c7fd6664152ff6376565527b 144 SUPERFAMILY SSF57716 110 143 2.28E-9 T 14-10-2018 PACID_12930 c11f5d11c7fd6664152ff6376565527b 144 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 143 7.1E-13 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PACID_12930 c11f5d11c7fd6664152ff6376565527b 144 SUPERFAMILY SSF109635 19 109 1.31E-5 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily PACID_12930 c11f5d11c7fd6664152ff6376565527b 144 Gene3D G3DSA:1.20.120.910 14 144 1.7E-28 T 14-10-2018 PACID_12930 c11f5d11c7fd6664152ff6376565527b 144 PRINTS PR00618 DksA/TraR zinc finger signature 113 124 6.0E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PACID_12930 c11f5d11c7fd6664152ff6376565527b 144 PRINTS PR00618 DksA/TraR zinc finger signature 125 137 6.0E-5 T 14-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria PACID_12120 9346853b13b48485f45ee9a919b3ec14 286 Pfam PF03099 Biotin/lipoate A/B protein ligase family 108 209 4.6E-7 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PACID_12120 9346853b13b48485f45ee9a919b3ec14 286 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 120 172 3.0E-20 T 14-10-2018 PACID_12120 9346853b13b48485f45ee9a919b3ec14 286 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 116 131 - T 14-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PACID_12120 9346853b13b48485f45ee9a919b3ec14 286 SUPERFAMILY SSF55681 58 248 1.16E-58 T 14-10-2018 PACID_12120 9346853b13b48485f45ee9a919b3ec14 286 Hamap MF_00013 Octanoyltransferase [lipB]. 43 264 31.734 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PACID_12120 9346853b13b48485f45ee9a919b3ec14 286 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 78 231 1.8E-38 T 14-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 PACID_12120 9346853b13b48485f45ee9a919b3ec14 286 Gene3D G3DSA:3.30.930.10 52 247 3.2E-68 T 14-10-2018 PACID_05470 6952e17cd4943396e8f181e8db4ca124 217 Gene3D G3DSA:1.10.150.240 28 84 1.7E-43 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PACID_05470 6952e17cd4943396e8f181e8db4ca124 217 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 15 177 1.0E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PACID_05470 6952e17cd4943396e8f181e8db4ca124 217 Gene3D G3DSA:3.40.50.1000 14 201 1.7E-43 T 14-10-2018 IPR023214 HAD superfamily PACID_05470 6952e17cd4943396e8f181e8db4ca124 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 16 182 4.1E-20 T 14-10-2018 PACID_05470 6952e17cd4943396e8f181e8db4ca124 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 86 181 1.4E-14 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PACID_05470 6952e17cd4943396e8f181e8db4ca124 217 SUPERFAMILY SSF56784 13 201 2.76E-40 T 14-10-2018 IPR036412 HAD-like superfamily PACID_07820 c2b10fdb78e2aaadef95fcf510ca4b25 389 Gene3D G3DSA:3.40.50.2000 5 187 3.1E-14 T 14-10-2018 PACID_07820 c2b10fdb78e2aaadef95fcf510ca4b25 389 SUPERFAMILY SSF53756 8 369 4.49E-38 T 14-10-2018 PACID_07820 c2b10fdb78e2aaadef95fcf510ca4b25 389 Gene3D G3DSA:3.40.50.2000 188 349 1.3E-15 T 14-10-2018 PACID_07820 c2b10fdb78e2aaadef95fcf510ca4b25 389 Pfam PF13692 Glycosyl transferases group 1 214 331 2.6E-7 T 14-10-2018 PACID_07820 c2b10fdb78e2aaadef95fcf510ca4b25 389 Pfam PF13579 Glycosyl transferase 4-like domain 21 174 3.2E-11 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_26460 7b9918ed2fcf1814ecaa45470757a97a 117 SUPERFAMILY SSF52038 2 79 2.35E-8 T 14-10-2018 IPR035905 Barstar-like superfamily PACID_26460 7b9918ed2fcf1814ecaa45470757a97a 117 Pfam PF01337 Barstar (barnase inhibitor) 2 77 5.1E-11 T 14-10-2018 IPR000468 Barstar (barnase inhibitor) PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 SUPERFAMILY SSF54373 297 479 5.0E-53 T 14-10-2018 PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 Gene3D G3DSA:3.50.50.60 5 534 2.6E-164 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 TIGRFAM TIGR01810 betA: choline dehydrogenase 6 540 1.8E-234 T 14-10-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 SUPERFAMILY SSF51905 1 538 1.6E-79 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 Gene3D G3DSA:1.10.1220.110 99 153 2.6E-164 T 14-10-2018 PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 Gene3D G3DSA:4.10.450.10 38 199 2.6E-164 T 14-10-2018 IPR027424 Glucose Oxidase, domain 2 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|Reactome: R-HSA-6798163 PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 PIRSF PIRSF000137 1 540 2.3E-131 T 14-10-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 Pfam PF00732 GMC oxidoreductase 5 302 3.2E-81 T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 Pfam PF05199 GMC oxidoreductase 394 530 2.0E-33 T 14-10-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 Gene3D G3DSA:3.30.410.40 154 476 2.6E-164 T 14-10-2018 PACID_07730 207f2538cc9845194c446b0d80bef3d1 575 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 84 107 - T 14-10-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 PACID_02750 8989211712513ceba000e35689d9f19a 349 Pfam PF04055 Radical SAM superfamily 26 191 5.0E-24 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_02750 8989211712513ceba000e35689d9f19a 349 Pfam PF06463 Molybdenum Cofactor Synthesis C 198 326 6.3E-34 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02750 8989211712513ceba000e35689d9f19a 349 SMART SM00729 22 229 1.4E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PACID_02750 8989211712513ceba000e35689d9f19a 349 Gene3D G3DSA:3.20.20.70 10 349 6.1E-83 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_02750 8989211712513ceba000e35689d9f19a 349 SUPERFAMILY SSF102114 12 293 1.31E-62 T 14-10-2018 PACID_02750 8989211712513ceba000e35689d9f19a 349 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 13 349 37.966 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02750 8989211712513ceba000e35689d9f19a 349 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 13 349 1.8E-108 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02750 8989211712513ceba000e35689d9f19a 349 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 28 39 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_28620 c7474c041537ff721a361935baa799ef 274 Pfam PF13354 Beta-lactamase enzyme family 27 242 3.4E-32 T 14-10-2018 PACID_28620 c7474c041537ff721a361935baa799ef 274 SUPERFAMILY SSF56601 11 260 3.76E-38 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_28620 c7474c041537ff721a361935baa799ef 274 Gene3D G3DSA:3.40.710.10 4 272 3.9E-48 T 14-10-2018 PACID_27510 595953abdf90bfb31683afb8ff53afe5 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 140 2.1E-47 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PACID_27510 595953abdf90bfb31683afb8ff53afe5 145 Gene3D G3DSA:3.50.80.10 1 143 1.4E-43 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PACID_27510 595953abdf90bfb31683afb8ff53afe5 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 141 30.766 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PACID_27510 595953abdf90bfb31683afb8ff53afe5 145 SUPERFAMILY SSF69500 1 141 2.22E-45 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily PACID_27510 595953abdf90bfb31683afb8ff53afe5 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 141 1.3E-39 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 SMART SM01232 122 214 1.8E-28 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 123 204 4.9E-19 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 Gene3D G3DSA:1.10.8.50 124 269 6.5E-41 T 14-10-2018 PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 SUPERFAMILY SSF57716 221 268 3.14E-13 T 14-10-2018 PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 SUPERFAMILY SSF81624 2 123 6.8E-18 T 14-10-2018 IPR035937 MutM-like, N-terminal PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 SMART SM00898 2 108 2.0E-12 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 Gene3D G3DSA:3.20.190.10 2 123 1.6E-7 T 14-10-2018 IPR035937 MutM-like, N-terminal PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 Pfam PF06827 Zinc finger found in FPG and IleRS 240 268 2.0E-9 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 PACID_23050 4b4e3f49c7ba38c84f3593e936a5237f 271 SUPERFAMILY SSF46946 122 204 5.15E-23 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PACID_08640 5c7cd83c358ae5cd7c8254224c9596f3 315 Gene3D G3DSA:1.10.3720.10 43 306 5.6E-70 T 14-10-2018 IPR035906 MetI-like superfamily PACID_08640 5c7cd83c358ae5cd7c8254224c9596f3 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 132 304 1.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_08640 5c7cd83c358ae5cd7c8254224c9596f3 315 SUPERFAMILY SSF161098 47 315 2.71E-74 T 14-10-2018 IPR035906 MetI-like superfamily PACID_09470 b95b373849f9481976ec998a6c2ce8a0 211 Pfam PF13302 Acetyltransferase (GNAT) domain 7 162 2.1E-15 T 14-10-2018 IPR000182 GNAT domain PACID_09470 b95b373849f9481976ec998a6c2ce8a0 211 SUPERFAMILY SSF55729 5 187 1.7E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_09470 b95b373849f9481976ec998a6c2ce8a0 211 Gene3D G3DSA:3.40.630.30 1 201 4.1E-35 T 14-10-2018 PACID_11770 2a254683274eb6da5202ab36923f0a88 185 Pfam PF06210 Protein of unknown function (DUF1003) 45 147 2.2E-41 T 14-10-2018 IPR010406 Protein of unknown function DUF1003 PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 Gene3D G3DSA:1.10.40.30 367 443 2.9E-131 T 14-10-2018 PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 Pfam PF10397 Adenylosuccinate lyase C-terminus 370 452 2.5E-11 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 Gene3D G3DSA:1.10.275.60 21 234 2.9E-131 T 14-10-2018 PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 8.2E-8 T 14-10-2018 IPR000362 Fumarate lyase family PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 PRINTS PR00149 Fumarate lyase superfamily signature 237 264 8.2E-8 T 14-10-2018 IPR000362 Fumarate lyase family PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 PRINTS PR00149 Fumarate lyase superfamily signature 280 296 8.2E-8 T 14-10-2018 IPR000362 Fumarate lyase family PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 8.2E-8 T 14-10-2018 IPR000362 Fumarate lyase family PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 ProSitePatterns PS00163 Fumarate lyases signature. 280 289 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 7 454 1.7E-120 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 SMART SM00998 369 455 4.4E-17 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 Pfam PF00206 Lyase 32 302 5.9E-16 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 SUPERFAMILY SSF48557 6 456 1.88E-81 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PACID_27320 f13d01b0f602ba5dd480affc13da9bb7 477 Gene3D G3DSA:1.20.200.10 10 451 2.9E-131 T 14-10-2018 PACID_08590 8c380cdb9ddafbcd0bc1aa89f9561295 279 SUPERFAMILY SSF56281 2 279 5.11E-24 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_08590 8c380cdb9ddafbcd0bc1aa89f9561295 279 Pfam PF12706 Beta-lactamase superfamily domain 64 221 2.3E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_08590 8c380cdb9ddafbcd0bc1aa89f9561295 279 Gene3D G3DSA:3.60.15.10 1 279 2.2E-49 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_14930 7555dccf6ec6e8dace307a156cfb6d7c 236 PIRSF PIRSF004848 1 236 3.5E-67 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PACID_14930 7555dccf6ec6e8dace307a156cfb6d7c 236 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 229 28.325 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PACID_14930 7555dccf6ec6e8dace307a156cfb6d7c 236 SUPERFAMILY SSF51419 1 228 1.23E-71 T 14-10-2018 IPR029066 PLP-binding barrel PACID_14930 7555dccf6ec6e8dace307a156cfb6d7c 236 Pfam PF01168 Alanine racemase, N-terminal domain 8 230 1.1E-26 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_14930 7555dccf6ec6e8dace307a156cfb6d7c 236 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 230 2.6E-56 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 PACID_14930 7555dccf6ec6e8dace307a156cfb6d7c 236 Gene3D G3DSA:3.20.20.10 1 235 3.5E-86 T 14-10-2018 IPR029066 PLP-binding barrel PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 43 170 2.0E-17 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 SUPERFAMILY SSF48150 12 220 1.48E-63 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 Gene3D G3DSA:1.10.1670.10 25 212 2.6E-68 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 SMART SM00525 195 215 0.0014 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 SMART SM00478 47 194 1.1E-49 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 TIGRFAM TIGR01083 nth: endonuclease III 13 203 2.8E-71 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 ProSitePatterns PS01155 Endonuclease III family signature. 111 140 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 Gene3D G3DSA:1.10.340.30 30 141 2.6E-68 T 14-10-2018 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 Hamap MF_00942 Endonuclease III [nth]. 9 218 35.996 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 196 212 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 196 212 5.5E-5 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 PIRSF PIRSF001435 9 221 1.5E-41 T 14-10-2018 PACID_29120 90d20ab86a7e4148f9ac36546ec50a7a 234 Pfam PF00633 Helix-hairpin-helix motif 108 135 7.9E-6 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 PACID_04530 faa04de335a51e16d2883274390ffee2 464 Pfam PF00675 Insulinase (Peptidase family M16) 42 150 2.6E-7 T 14-10-2018 IPR011765 Peptidase M16, N-terminal PACID_04530 faa04de335a51e16d2883274390ffee2 464 SUPERFAMILY SSF63411 24 219 8.07E-28 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PACID_04530 faa04de335a51e16d2883274390ffee2 464 Gene3D G3DSA:3.30.830.10 253 443 2.5E-30 T 14-10-2018 PACID_04530 faa04de335a51e16d2883274390ffee2 464 Gene3D G3DSA:3.30.830.10 34 235 4.3E-27 T 14-10-2018 PACID_04530 faa04de335a51e16d2883274390ffee2 464 Pfam PF05193 Peptidase M16 inactive domain 195 370 9.6E-10 T 14-10-2018 IPR007863 Peptidase M16, C-terminal PACID_04530 faa04de335a51e16d2883274390ffee2 464 SUPERFAMILY SSF63411 256 440 5.68E-21 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 PACID_28230 dd9d92d04cbc50836bd79bec91365dbe 257 Pfam PF01738 Dienelactone hydrolase family 50 256 3.2E-39 T 14-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 PACID_28230 dd9d92d04cbc50836bd79bec91365dbe 257 Gene3D G3DSA:3.40.50.1820 16 257 1.2E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_28230 dd9d92d04cbc50836bd79bec91365dbe 257 SUPERFAMILY SSF53474 34 257 1.79E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 Pfam PF00574 Clp protease 46 223 1.2E-72 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 33 225 39.26 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 PRINTS PR00127 Clp protease catalytic subunit P signature 89 109 1.2E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 PRINTS PR00127 Clp protease catalytic subunit P signature 49 64 1.2E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 PRINTS PR00127 Clp protease catalytic subunit P signature 200 219 1.2E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 PRINTS PR00127 Clp protease catalytic subunit P signature 120 137 1.2E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 PRINTS PR00127 Clp protease catalytic subunit P signature 141 160 1.2E-41 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 120 131 - T 14-10-2018 IPR018215 ClpP, Ser active site PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 SUPERFAMILY SSF52096 41 224 3.75E-61 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 142 155 - T 14-10-2018 IPR033135 ClpP, histidine active site PACID_22770 59feb499b63b63fc8a538018f8a83ba4 225 Gene3D G3DSA:3.90.226.10 25 224 8.1E-74 T 14-10-2018 PACID_21860 47ec837e62a7e3e731f45acdea7aa391 171 Pfam PF02576 RimP N-terminal domain 9 85 2.8E-13 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal PACID_21860 47ec837e62a7e3e731f45acdea7aa391 171 Gene3D G3DSA:3.30.300.70 2 82 1.7E-10 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily PACID_21860 47ec837e62a7e3e731f45acdea7aa391 171 SUPERFAMILY SSF75420 4 85 6.93E-13 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily PACID_21860 47ec837e62a7e3e731f45acdea7aa391 171 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 4 160 18.287 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 PACID_21860 47ec837e62a7e3e731f45acdea7aa391 171 Pfam PF17384 RimP C-terminal SH3 domain 89 159 2.5E-8 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 SUPERFAMILY SSF54211 54 232 6.91E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 PRINTS PR00959 Mevalonate kinase family signature 139 161 5.0E-19 T 14-10-2018 PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 PRINTS PR00959 Mevalonate kinase family signature 55 79 5.0E-19 T 14-10-2018 PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 PRINTS PR00959 Mevalonate kinase family signature 311 328 5.0E-19 T 14-10-2018 PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 Pfam PF00288 GHMP kinases N terminal domain 134 194 1.2E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 Gene3D G3DSA:3.30.230.10 47 211 1.2E-39 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 Gene3D G3DSA:3.30.70.890 218 355 3.4E-38 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 SUPERFAMILY SSF55060 219 351 2.88E-29 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 Pfam PF08544 GHMP kinases C terminal 269 344 3.4E-14 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain PACID_26690 04b81a531361458b1cc3d59d2eab90a7 356 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 55 326 1.7E-74 T 14-10-2018 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168 PACID_15970 05d20ebb8e3f055999a1d8c28abf4509 687 Gene3D G3DSA:3.40.50.300 497 678 1.9E-26 T 14-10-2018 PACID_15970 05d20ebb8e3f055999a1d8c28abf4509 687 SMART SM00491 527 653 9.1E-35 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PACID_15970 05d20ebb8e3f055999a1d8c28abf4509 687 Gene3D G3DSA:3.40.50.300 36 304 3.7E-43 T 14-10-2018 PACID_15970 05d20ebb8e3f055999a1d8c28abf4509 687 SUPERFAMILY SSF52540 50 639 2.41E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_15970 05d20ebb8e3f055999a1d8c28abf4509 687 Pfam PF13307 Helicase C-terminal domain 507 664 9.3E-26 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 PACID_15970 05d20ebb8e3f055999a1d8c28abf4509 687 SMART SM00487 33 311 1.6E-5 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_21040 d869ffd826fb7d90a8efaac10ea70885 450 Pfam PF01546 Peptidase family M20/M25/M40 89 448 3.7E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PACID_21040 d869ffd826fb7d90a8efaac10ea70885 450 SUPERFAMILY SSF55031 209 348 4.19E-11 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PACID_21040 d869ffd826fb7d90a8efaac10ea70885 450 Pfam PF07687 Peptidase dimerisation domain 207 334 1.1E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_21040 d869ffd826fb7d90a8efaac10ea70885 450 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 88 97 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PACID_21040 d869ffd826fb7d90a8efaac10ea70885 450 Gene3D G3DSA:3.40.630.10 10 212 1.1E-45 T 14-10-2018 PACID_21040 d869ffd826fb7d90a8efaac10ea70885 450 SUPERFAMILY SSF53187 11 449 1.0E-47 T 14-10-2018 PACID_33640 25c44c50184edf7b2980e5dc8f560540 344 Gene3D G3DSA:1.20.1530.20 4 322 7.9E-97 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily PACID_33640 25c44c50184edf7b2980e5dc8f560540 344 Pfam PF01758 Sodium Bile acid symporter family 48 222 2.7E-35 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 PACID_32370 1deaf08d6185e5c8af16ab4564283b49 442 Gene3D G3DSA:2.60.40.420 31 147 5.0E-5 T 14-10-2018 IPR008972 Cupredoxin PACID_32370 1deaf08d6185e5c8af16ab4564283b49 442 Pfam PF09375 Imelysin 154 395 7.0E-37 T 14-10-2018 IPR018976 Imelysin-like domain PACID_32370 1deaf08d6185e5c8af16ab4564283b49 442 Gene3D G3DSA:1.20.1420.20 148 442 1.1E-73 T 14-10-2018 IPR038352 Imelysin-like domain superfamily PACID_32370 1deaf08d6185e5c8af16ab4564283b49 442 Pfam PF13473 Cupredoxin-like domain 30 124 4.0E-11 T 14-10-2018 IPR028096 EfeO-type cupredoxin-like domain PACID_08180 f72170060dba1132d3a13e95aa5fe433 210 PIRSF PIRSF038321 13 192 3.3E-70 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 PACID_08180 f72170060dba1132d3a13e95aa5fe433 210 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 16 183 1.9E-72 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 PACID_08180 f72170060dba1132d3a13e95aa5fe433 210 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 13 185 1.1E-49 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 PACID_08820 3ec6f2a0dee831451f7f0cb3cf21a8c0 288 Gene3D G3DSA:3.30.950.10 117 237 4.2E-43 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PACID_08820 3ec6f2a0dee831451f7f0cb3cf21a8c0 288 SUPERFAMILY SSF53790 4 255 1.7E-60 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PACID_08820 3ec6f2a0dee831451f7f0cb3cf21a8c0 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 215 4.2E-36 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PACID_08820 3ec6f2a0dee831451f7f0cb3cf21a8c0 288 Gene3D G3DSA:3.40.1010.10 1 116 2.2E-23 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PACID_08820 3ec6f2a0dee831451f7f0cb3cf21a8c0 288 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 9 257 9.7E-101 T 14-10-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 PACID_14240 dab2c720b663edccf646f688e6be75a0 89 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 4 41 3.6E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PACID_14240 dab2c720b663edccf646f688e6be75a0 89 Gene3D G3DSA:2.10.260.10 2 41 5.0E-13 T 14-10-2018 PACID_14240 dab2c720b663edccf646f688e6be75a0 89 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 4 41 1.6E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PACID_14240 dab2c720b663edccf646f688e6be75a0 89 SUPERFAMILY SSF89447 2 46 1.7E-11 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily PACID_14240 dab2c720b663edccf646f688e6be75a0 89 SMART SM00966 3 48 1.5E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 Pfam PF01872 RibD C-terminal domain 173 351 6.9E-45 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 SUPERFAMILY SSF53927 32 170 1.67E-39 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 PIRSF PIRSF006769 26 272 1.3E-87 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 PIRSF PIRSF006769 261 358 4.0E-14 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 34 351 4.5E-90 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 30 126 2.5E-17 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 SUPERFAMILY SSF53597 170 352 4.84E-50 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 77 115 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 Gene3D G3DSA:3.40.140.10 20 168 1.7E-39 T 14-10-2018 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 Gene3D G3DSA:3.40.430.10 169 268 2.3E-28 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_24670 8f100c23fc92d6cca0376aa63fff7d2b 387 Gene3D G3DSA:3.40.430.10 269 359 2.2E-22 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_26760 e6617fe7771abaed6d3f6add9e09d667 203 Gene3D G3DSA:1.10.10.10 16 98 3.8E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_26760 e6617fe7771abaed6d3f6add9e09d667 203 Pfam PF03551 Transcriptional regulator PadR-like family 19 93 8.9E-11 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal PACID_26760 e6617fe7771abaed6d3f6add9e09d667 203 SUPERFAMILY SSF46785 17 184 1.62E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_28920 fecddfb475b0c30237374fd82892459f 761 Pfam PF00270 DEAD/DEAH box helicase 52 234 3.4E-22 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_28920 fecddfb475b0c30237374fd82892459f 761 Gene3D G3DSA:3.40.50.300 30 248 2.4E-37 T 14-10-2018 PACID_28920 fecddfb475b0c30237374fd82892459f 761 SUPERFAMILY SSF52540 58 397 1.8E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28920 fecddfb475b0c30237374fd82892459f 761 SMART SM00490 301 385 7.1E-13 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_28920 fecddfb475b0c30237374fd82892459f 761 SMART SM00487 44 264 2.9E-25 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_28920 fecddfb475b0c30237374fd82892459f 761 Pfam PF09369 Domain of unknown function (DUF1998) 647 725 5.7E-16 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative PACID_28920 fecddfb475b0c30237374fd82892459f 761 Pfam PF00271 Helicase conserved C-terminal domain 283 385 1.8E-13 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_28920 fecddfb475b0c30237374fd82892459f 761 Gene3D G3DSA:3.40.50.300 264 407 3.2E-22 T 14-10-2018 PACID_28920 fecddfb475b0c30237374fd82892459f 761 TIGRFAM TIGR03817 DECH_helic: helicase/secretion neighborhood putative DEAH-box helicase 12 750 0.0 T 14-10-2018 IPR022307 DEAD/DEAH-box helicase, putative, actinobacteria PACID_32870 d04a2842f085c2d6a12904a5c7badf2e 348 Gene3D G3DSA:3.40.1190.20 16 336 3.8E-56 T 14-10-2018 IPR029056 Ribokinase-like PACID_32870 d04a2842f085c2d6a12904a5c7badf2e 348 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 279 292 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PACID_32870 d04a2842f085c2d6a12904a5c7badf2e 348 Pfam PF00294 pfkB family carbohydrate kinase 26 323 1.4E-35 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PACID_32870 d04a2842f085c2d6a12904a5c7badf2e 348 SUPERFAMILY SSF53613 22 322 9.35E-52 T 14-10-2018 IPR029056 Ribokinase-like PACID_26570 b5252713003117eeb296960ec66e060e 152 Pfam PF03610 PTS system fructose IIA component 19 135 1.8E-22 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 PACID_26570 b5252713003117eeb296960ec66e060e 152 SUPERFAMILY SSF53062 18 142 1.15E-26 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 PACID_26570 b5252713003117eeb296960ec66e060e 152 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 18 141 2.5E-32 T 14-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain PACID_26570 b5252713003117eeb296960ec66e060e 152 Gene3D G3DSA:3.40.50.510 13 147 1.6E-42 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 PACID_11970 da686b62ab2a56e33bdb6baef18ff615 272 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 7 248 7.2E-74 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PACID_11970 da686b62ab2a56e33bdb6baef18ff615 272 Gene3D G3DSA:3.40.1390.30 101 229 3.3E-69 T 14-10-2018 PACID_11970 da686b62ab2a56e33bdb6baef18ff615 272 SUPERFAMILY SSF102705 1 264 1.03E-81 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily PACID_11970 da686b62ab2a56e33bdb6baef18ff615 272 Gene3D G3DSA:3.40.1390.30 10 242 3.3E-69 T 14-10-2018 PACID_11970 da686b62ab2a56e33bdb6baef18ff615 272 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 261 1.1E-53 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 SUPERFAMILY SSF52518 5 217 5.42E-26 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 SUPERFAMILY SSF52518 405 620 4.18E-48 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 Gene3D G3DSA:3.40.50.970 1 217 4.3E-26 T 14-10-2018 PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 425 588 1.6E-38 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 Gene3D G3DSA:3.40.50.970 403 594 5.7E-43 T 14-10-2018 PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 229 362 5.4E-34 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 Gene3D G3DSA:3.40.50.1220 223 394 3.9E-38 T 14-10-2018 PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 207 1.5E-28 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 SUPERFAMILY SSF52467 194 376 4.81E-43 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PACID_09330 9ccf349f3ffdb620cb33eb2e530e0584 634 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 7 631 9.4E-261 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 PACID_25460 f53313a566417bbcf8f1daff426eaa96 535 SUPERFAMILY SSF53850 56 533 6.52E-80 T 14-10-2018 PACID_25460 f53313a566417bbcf8f1daff426eaa96 535 PIRSF PIRSF002741 271 535 1.8E-37 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PACID_25460 f53313a566417bbcf8f1daff426eaa96 535 PIRSF PIRSF002741 2 281 1.2E-15 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PACID_25460 f53313a566417bbcf8f1daff426eaa96 535 Gene3D G3DSA:3.90.76.10 91 204 2.8E-21 T 14-10-2018 PACID_25460 f53313a566417bbcf8f1daff426eaa96 535 Gene3D G3DSA:3.10.105.10 279 505 1.9E-49 T 14-10-2018 PACID_25460 f53313a566417bbcf8f1daff426eaa96 535 Gene3D G3DSA:3.40.190.10 205 278 2.3E-9 T 14-10-2018 PACID_25460 f53313a566417bbcf8f1daff426eaa96 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 275 446 1.4E-27 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PACID_31810 198cfde0a041c414ce8fe9a7baa67178 310 Pfam PF13671 AAA domain 2 135 2.2E-17 T 14-10-2018 PACID_31810 198cfde0a041c414ce8fe9a7baa67178 310 Gene3D G3DSA:3.40.50.1000 169 309 2.1E-41 T 14-10-2018 IPR023214 HAD superfamily PACID_31810 198cfde0a041c414ce8fe9a7baa67178 310 SUPERFAMILY SSF56784 165 309 1.16E-14 T 14-10-2018 IPR036412 HAD-like superfamily PACID_31810 198cfde0a041c414ce8fe9a7baa67178 310 SUPERFAMILY SSF52540 2 139 1.78E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_31810 198cfde0a041c414ce8fe9a7baa67178 310 Gene3D G3DSA:3.40.50.300 1 137 9.8E-32 T 14-10-2018 PACID_27990 ea63980e660b572c5c9e7af3386c2e79 521 Gene3D G3DSA:3.40.50.10090 248 477 3.9E-39 T 14-10-2018 PACID_27990 ea63980e660b572c5c9e7af3386c2e79 521 Gene3D G3DSA:3.40.50.10090 272 412 3.9E-39 T 14-10-2018 PACID_27990 ea63980e660b572c5c9e7af3386c2e79 521 SUPERFAMILY SSF69618 240 491 3.79E-58 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_27990 ea63980e660b572c5c9e7af3386c2e79 521 SUPERFAMILY SSF53790 1 243 9.95E-35 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PACID_27990 ea63980e660b572c5c9e7af3386c2e79 521 Gene3D G3DSA:3.30.950.10 113 247 2.9E-13 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PACID_27990 ea63980e660b572c5c9e7af3386c2e79 521 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 2 201 4.1E-32 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PACID_27990 ea63980e660b572c5c9e7af3386c2e79 521 Pfam PF02602 Uroporphyrinogen-III synthase HemD 257 483 6.0E-56 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_27990 ea63980e660b572c5c9e7af3386c2e79 521 Gene3D G3DSA:3.40.1010.10 1 110 5.6E-21 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PACID_34110 a243296d85e8dd2c37639289137d9b5b 589 ProSitePatterns PS00216 Sugar transport proteins signature 1. 148 165 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_34110 a243296d85e8dd2c37639289137d9b5b 589 Pfam PF00083 Sugar (and other) transporter 89 583 7.3E-93 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_34110 a243296d85e8dd2c37639289137d9b5b 589 PRINTS PR00171 Sugar transporter signature 485 506 4.9E-18 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_34110 a243296d85e8dd2c37639289137d9b5b 589 PRINTS PR00171 Sugar transporter signature 185 204 4.9E-18 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_34110 a243296d85e8dd2c37639289137d9b5b 589 PRINTS PR00171 Sugar transporter signature 97 107 4.9E-18 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_34110 a243296d85e8dd2c37639289137d9b5b 589 PRINTS PR00171 Sugar transporter signature 385 395 4.9E-18 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_34110 a243296d85e8dd2c37639289137d9b5b 589 PRINTS PR00171 Sugar transporter signature 508 520 4.9E-18 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_34110 a243296d85e8dd2c37639289137d9b5b 589 SUPERFAMILY SSF103473 88 582 3.92E-64 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_30910 b91e331b8e0e2de67815843d7cbedb50 416 Gene3D G3DSA:1.20.1250.20 7 197 1.7E-16 T 14-10-2018 PACID_30910 b91e331b8e0e2de67815843d7cbedb50 416 SUPERFAMILY SSF103473 226 406 1.12E-15 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_30910 b91e331b8e0e2de67815843d7cbedb50 416 SUPERFAMILY SSF103473 3 191 2.22E-18 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_30910 b91e331b8e0e2de67815843d7cbedb50 416 Pfam PF07690 Major Facilitator Superfamily 18 253 5.0E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_30910 b91e331b8e0e2de67815843d7cbedb50 416 Pfam PF07690 Major Facilitator Superfamily 267 406 5.4E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_30910 b91e331b8e0e2de67815843d7cbedb50 416 Gene3D G3DSA:1.20.1250.20 227 410 3.2E-12 T 14-10-2018 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 Pfam PF13328 HD domain 75 222 1.7E-49 T 14-10-2018 IPR003607 HD/PDEase domain PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 Gene3D G3DSA:3.10.20.30 436 502 1.3E-31 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 SUPERFAMILY SSF109604 52 236 9.42E-74 T 14-10-2018 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 Gene3D G3DSA:3.30.460.10 240 372 1.2E-47 T 14-10-2018 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 SUPERFAMILY SSF55021 697 772 6.25E-14 T 14-10-2018 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 SUPERFAMILY SSF81271 426 497 1.31E-21 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 Pfam PF04607 Region found in RelA / SpoT proteins 282 391 1.5E-35 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 Pfam PF13291 ACT domain 694 771 8.5E-16 T 14-10-2018 IPR002912 ACT domain PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 Gene3D G3DSA:3.30.70.260 695 774 1.0E-15 T 14-10-2018 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 SMART SM00954 282 392 6.6E-65 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 Pfam PF02824 TGS domain 438 497 1.9E-22 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 SMART SM00471 90 200 5.1E-12 T 14-10-2018 IPR003607 HD/PDEase domain PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 SUPERFAMILY SSF81301 227 442 6.54E-62 T 14-10-2018 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 Gene3D G3DSA:1.10.3210.10 47 237 1.5E-80 T 14-10-2018 PACID_17960 b8034d4d776e9a0c12d4f3ccfde50a14 774 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 75 771 1.1E-249 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 PACID_17200 ac4b5f26a63251ab3d0c9de911bdb4a6 169 Pfam PF00583 Acetyltransferase (GNAT) family 51 148 4.2E-17 T 14-10-2018 IPR000182 GNAT domain PACID_17200 ac4b5f26a63251ab3d0c9de911bdb4a6 169 SUPERFAMILY SSF55729 16 163 1.05E-34 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_17200 ac4b5f26a63251ab3d0c9de911bdb4a6 169 Gene3D G3DSA:3.40.630.30 12 169 1.5E-46 T 14-10-2018 PACID_26420 acf98a1ba4af1a3f4728412bbcd9c05f 432 Pfam PF01494 FAD binding domain 18 348 5.0E-14 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 PACID_26420 acf98a1ba4af1a3f4728412bbcd9c05f 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 165 180 1.0E-10 T 14-10-2018 PACID_26420 acf98a1ba4af1a3f4728412bbcd9c05f 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 19 41 1.0E-10 T 14-10-2018 PACID_26420 acf98a1ba4af1a3f4728412bbcd9c05f 432 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 302 317 1.0E-10 T 14-10-2018 PACID_26420 acf98a1ba4af1a3f4728412bbcd9c05f 432 SUPERFAMILY SSF51905 19 382 2.0E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_26420 acf98a1ba4af1a3f4728412bbcd9c05f 432 TIGRFAM TIGR02032 GG-red-SF: geranylgeranyl reductase family 19 337 6.6E-76 T 14-10-2018 IPR011777 Geranylgeranyl reductase family GO:0016628|GO:0055114 PACID_26420 acf98a1ba4af1a3f4728412bbcd9c05f 432 Gene3D G3DSA:3.50.50.60 15 413 3.6E-92 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_30750 81294ddd3344d6bbe6f13959d71fae8e 245 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 237 1.9E-44 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 PACID_30750 81294ddd3344d6bbe6f13959d71fae8e 245 SUPERFAMILY SSF51695 1 243 7.85E-71 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PACID_30750 81294ddd3344d6bbe6f13959d71fae8e 245 Gene3D G3DSA:3.20.20.190 1 244 3.4E-77 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 PACID_29960 d62e05c7727280f4d1516ed09aa6146d 248 Pfam PF13613 Helix-turn-helix of DDE superfamily endonuclease 40 80 7.0E-9 T 14-10-2018 IPR027805 Transposase, Helix-turn-helix domain PACID_29960 d62e05c7727280f4d1516ed09aa6146d 248 Pfam PF13359 DDE superfamily endonuclease 98 242 4.8E-26 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain PACID_13820 aa1314f7d6a4f3ecd2a2c3c5cc1b8eee 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 2 86 6.1E-24 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_13820 aa1314f7d6a4f3ecd2a2c3c5cc1b8eee 88 SUPERFAMILY SSF46992 3 86 2.75E-27 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_13820 aa1314f7d6a4f3ecd2a2c3c5cc1b8eee 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.31 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_13820 aa1314f7d6a4f3ecd2a2c3c5cc1b8eee 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 88 2.0E-29 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_13820 aa1314f7d6a4f3ecd2a2c3c5cc1b8eee 88 Gene3D G3DSA:1.20.58.110 1 87 1.5E-27 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_13820 aa1314f7d6a4f3ecd2a2c3c5cc1b8eee 88 Pfam PF01649 Ribosomal protein S20 2 84 3.8E-25 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_13380 b04c2bac5bd2215c9be9ca6133391f49 216 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 18 207 4.1E-53 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PACID_13380 b04c2bac5bd2215c9be9ca6133391f49 216 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 14 208 29.491 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 PACID_13380 b04c2bac5bd2215c9be9ca6133391f49 216 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 17 79 9.8E-10 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PACID_13380 b04c2bac5bd2215c9be9ca6133391f49 216 SUPERFAMILY SSF52374 13 207 1.78E-51 T 14-10-2018 PACID_13380 b04c2bac5bd2215c9be9ca6133391f49 216 Gene3D G3DSA:3.40.50.620 12 214 1.1E-59 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_13380 b04c2bac5bd2215c9be9ca6133391f49 216 Pfam PF01467 Cytidylyltransferase-like 18 182 5.2E-31 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PACID_11290 818d48155edda71e6dd9b314377c7e94 310 SUPERFAMILY SSF53850 60 297 2.72E-51 T 14-10-2018 PACID_11290 818d48155edda71e6dd9b314377c7e94 310 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 71 295 2.1E-47 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_11290 818d48155edda71e6dd9b314377c7e94 310 Gene3D G3DSA:3.40.190.10 153 259 1.5E-55 T 14-10-2018 PACID_11290 818d48155edda71e6dd9b314377c7e94 310 Gene3D G3DSA:3.40.190.10 68 293 1.5E-55 T 14-10-2018 PACID_11290 818d48155edda71e6dd9b314377c7e94 310 SMART SM00062 70 297 2.0E-36 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_14980 acf8c0ae741487e423255ee2f17299f9 311 SUPERFAMILY SSF52151 2 303 1.57E-59 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PACID_14980 acf8c0ae741487e423255ee2f17299f9 311 Pfam PF00698 Acyl transferase domain 5 282 1.7E-20 T 14-10-2018 IPR014043 Acyl transferase PACID_14980 acf8c0ae741487e423255ee2f17299f9 311 Gene3D G3DSA:3.40.366.10 3 278 7.2E-74 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 PACID_14980 acf8c0ae741487e423255ee2f17299f9 311 Gene3D G3DSA:3.30.70.250 125 188 7.2E-74 T 14-10-2018 PACID_14980 acf8c0ae741487e423255ee2f17299f9 311 SUPERFAMILY SSF55048 127 179 1.31E-11 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding PACID_14980 acf8c0ae741487e423255ee2f17299f9 311 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 5 307 2.4E-14 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain PACID_03480 538533829b0cd0bb9ec399974374296b 452 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 5 433 1.7E-114 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_03480 538533829b0cd0bb9ec399974374296b 452 ProSitePatterns PS00217 Sugar transport proteins signature 2. 100 125 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_03480 538533829b0cd0bb9ec399974374296b 452 PRINTS PR00171 Sugar transporter signature 12 22 4.1E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_03480 538533829b0cd0bb9ec399974374296b 452 PRINTS PR00171 Sugar transporter signature 338 359 4.1E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_03480 538533829b0cd0bb9ec399974374296b 452 PRINTS PR00171 Sugar transporter signature 361 373 4.1E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_03480 538533829b0cd0bb9ec399974374296b 452 PRINTS PR00171 Sugar transporter signature 95 114 4.1E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_03480 538533829b0cd0bb9ec399974374296b 452 PRINTS PR00171 Sugar transporter signature 249 259 4.1E-27 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_03480 538533829b0cd0bb9ec399974374296b 452 ProSitePatterns PS00216 Sugar transport proteins signature 1. 58 75 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_03480 538533829b0cd0bb9ec399974374296b 452 Pfam PF00083 Sugar (and other) transporter 6 436 7.8E-117 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_03480 538533829b0cd0bb9ec399974374296b 452 SUPERFAMILY SSF103473 3 435 7.32E-78 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_03480 538533829b0cd0bb9ec399974374296b 452 Gene3D G3DSA:1.20.1250.20 1 440 6.3E-128 T 14-10-2018 PACID_03280 3360abb7c967ce8ffa975e546be1535a 749 Pfam PF13361 UvrD-like helicase C-terminal domain 679 745 8.9E-12 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_03280 3360abb7c967ce8ffa975e546be1535a 749 Gene3D G3DSA:3.40.50.300 559 748 2.3E-24 T 14-10-2018 PACID_03280 3360abb7c967ce8ffa975e546be1535a 749 Pfam PF13245 AAA domain 275 538 3.1E-15 T 14-10-2018 PACID_03280 3360abb7c967ce8ffa975e546be1535a 749 SUPERFAMILY SSF52540 268 746 7.02E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13810 58ad20bf4916fca35b0de54d3d328bcf 351 Gene3D G3DSA:1.10.8.60 153 217 4.5E-6 T 14-10-2018 PACID_13810 58ad20bf4916fca35b0de54d3d328bcf 351 SUPERFAMILY SSF48019 223 337 2.15E-12 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 PACID_13810 58ad20bf4916fca35b0de54d3d328bcf 351 Gene3D G3DSA:1.20.272.10 218 343 5.4E-19 T 14-10-2018 PACID_13810 58ad20bf4916fca35b0de54d3d328bcf 351 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 32 338 4.5E-31 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 PACID_13810 58ad20bf4916fca35b0de54d3d328bcf 351 Pfam PF06144 DNA polymerase III, delta subunit 62 196 7.4E-8 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 PACID_13810 58ad20bf4916fca35b0de54d3d328bcf 351 SUPERFAMILY SSF52540 32 214 5.04E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13810 58ad20bf4916fca35b0de54d3d328bcf 351 Gene3D G3DSA:3.40.50.300 25 142 1.3E-6 T 14-10-2018 PACID_08790 d11afa5626929c6c54c30d70dc392df9 339 Pfam PF03186 CobD/Cbib protein 22 302 8.9E-82 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PACID_08790 d11afa5626929c6c54c30d70dc392df9 339 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 22 288 3.9E-54 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PACID_08790 d11afa5626929c6c54c30d70dc392df9 339 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 329 75.272 T 14-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 PACID_31570 8654c36544ed3b39486233c58b912e00 311 Gene3D G3DSA:3.40.50.1360 50 310 2.4E-65 T 14-10-2018 PACID_31570 8654c36544ed3b39486233c58b912e00 311 SUPERFAMILY SSF100950 62 311 8.12E-55 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_31570 8654c36544ed3b39486233c58b912e00 311 SUPERFAMILY SSF46785 15 83 9.4E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_31570 8654c36544ed3b39486233c58b912e00 311 Pfam PF04198 Putative sugar-binding domain 64 310 6.8E-55 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 PACID_31570 8654c36544ed3b39486233c58b912e00 311 Gene3D G3DSA:1.10.10.10 1 49 2.8E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_21810 312241ab8aa680a148387d936944eac1 147 Pfam PF02033 Ribosome-binding factor A 5 108 4.0E-25 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PACID_21810 312241ab8aa680a148387d936944eac1 147 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 108 25.002 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PACID_21810 312241ab8aa680a148387d936944eac1 147 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 PACID_21810 312241ab8aa680a148387d936944eac1 147 SUPERFAMILY SSF89919 1 110 3.4E-29 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily PACID_21810 312241ab8aa680a148387d936944eac1 147 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 109 9.7E-23 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PACID_21810 312241ab8aa680a148387d936944eac1 147 Gene3D G3DSA:3.30.300.20 1 116 2.9E-27 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_21810 312241ab8aa680a148387d936944eac1 147 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 95 2.0E-36 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 PRINTS PR00743 Glycosyl hydrolase family 36 signature 309 323 2.2E-36 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 PRINTS PR00743 Glycosyl hydrolase family 36 signature 387 409 2.2E-36 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 PRINTS PR00743 Glycosyl hydrolase family 36 signature 337 352 2.2E-36 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 PRINTS PR00743 Glycosyl hydrolase family 36 signature 224 239 2.2E-36 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 PRINTS PR00743 Glycosyl hydrolase family 36 signature 494 510 2.2E-36 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 PRINTS PR00743 Glycosyl hydrolase family 36 signature 445 460 2.2E-36 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 PRINTS PR00743 Glycosyl hydrolase family 36 signature 519 535 2.2E-36 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 PIRSF PIRSF005536 98 673 4.6E-154 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 Gene3D G3DSA:2.70.98.60 14 290 4.9E-29 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 Pfam PF02065 Melibiase 272 607 2.6E-104 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 Gene3D G3DSA:3.20.20.70 292 605 3.4E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 ProSitePatterns PS00512 Alpha-galactosidase signature. 338 354 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 36 267 8.1E-40 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_03120 f587c083ddc5c75509467d29cbdde75a 717 SUPERFAMILY SSF51445 307 635 6.8E-91 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_23980 137e5c77e43666ef89e15d92dccbb671 171 PIRSF PIRSF001399 1 146 2.3E-56 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PACID_23980 137e5c77e43666ef89e15d92dccbb671 171 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 14-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PACID_23980 137e5c77e43666ef89e15d92dccbb671 171 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 140 6.0E-46 T 14-10-2018 PACID_23980 137e5c77e43666ef89e15d92dccbb671 171 SUPERFAMILY SSF52304 3 148 6.15E-53 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PACID_23980 137e5c77e43666ef89e15d92dccbb671 171 Gene3D G3DSA:3.40.50.9100 1 149 3.7E-56 T 14-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PACID_23980 137e5c77e43666ef89e15d92dccbb671 171 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 169 56.97 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PACID_23980 137e5c77e43666ef89e15d92dccbb671 171 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 139 2.0E-53 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PACID_23980 137e5c77e43666ef89e15d92dccbb671 171 Pfam PF01220 Dehydroquinase class II 3 138 1.3E-50 T 14-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.0E-139 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 5.8E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 110 123 5.8E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 270 285 5.8E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 5.8E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 5.8E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 8.4E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 313 3.1E-71 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 SUPERFAMILY SSF51735 1 180 1.07E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 Gene3D G3DSA:3.30.360.10 152 315 1.5E-156 T 14-10-2018 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 SUPERFAMILY SSF55347 152 313 3.57E-73 T 14-10-2018 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 Gene3D G3DSA:3.40.50.720 4 326 1.5E-156 T 14-10-2018 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 PIRSF PIRSF000149 1 335 2.7E-136 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13190 edd442f30ebbb4f6267f7a393633bbf6 335 SMART SM00846 3 153 2.4E-95 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_32730 be216055d35d3c4fe98f8fa3915c5a76 320 SUPERFAMILY SSF51735 98 289 3.95E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_32730 be216055d35d3c4fe98f8fa3915c5a76 320 Gene3D G3DSA:3.40.50.720 3 313 6.2E-107 T 14-10-2018 PACID_32730 be216055d35d3c4fe98f8fa3915c5a76 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 288 1.2E-58 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PACID_32730 be216055d35d3c4fe98f8fa3915c5a76 320 SUPERFAMILY SSF52283 1 133 3.78E-31 T 14-10-2018 PACID_32730 be216055d35d3c4fe98f8fa3915c5a76 320 Gene3D G3DSA:3.40.50.720 94 288 6.2E-107 T 14-10-2018 PACID_32730 be216055d35d3c4fe98f8fa3915c5a76 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 320 1.0E-28 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PACID_32730 be216055d35d3c4fe98f8fa3915c5a76 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 199 221 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site PACID_18610 b684e8b6ba8c89454c6ea6b09597f699 303 PIRSF PIRSF029271 4 303 1.1E-149 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_18610 b684e8b6ba8c89454c6ea6b09597f699 303 ProSitePatterns PS01235 PdxS/SNZ family signature. 214 232 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_18610 b684e8b6ba8c89454c6ea6b09597f699 303 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 18 303 1.3E-142 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_18610 b684e8b6ba8c89454c6ea6b09597f699 303 Gene3D G3DSA:3.20.20.70 10 303 1.3E-148 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_18610 b684e8b6ba8c89454c6ea6b09597f699 303 SUPERFAMILY SSF51366 27 275 4.47E-60 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PACID_18610 b684e8b6ba8c89454c6ea6b09597f699 303 Pfam PF01680 SOR/SNZ family 16 221 1.9E-106 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_18610 b684e8b6ba8c89454c6ea6b09597f699 303 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 13 303 51.05 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_30250 34fbb34f5012257853d8f3397e1172c4 554 PIRSF PIRSF000538 42 549 6.1E-127 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_30250 34fbb34f5012257853d8f3397e1172c4 554 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 44 290 2.2E-46 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_30250 34fbb34f5012257853d8f3397e1172c4 554 Gene3D G3DSA:3.30.420.40 292 552 1.7E-85 T 14-10-2018 PACID_30250 34fbb34f5012257853d8f3397e1172c4 554 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 303 495 3.1E-42 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_30250 34fbb34f5012257853d8f3397e1172c4 554 SUPERFAMILY SSF53067 292 544 3.88E-67 T 14-10-2018 PACID_30250 34fbb34f5012257853d8f3397e1172c4 554 SUPERFAMILY SSF53067 44 293 1.84E-64 T 14-10-2018 PACID_30250 34fbb34f5012257853d8f3397e1172c4 554 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 408 428 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_30250 34fbb34f5012257853d8f3397e1172c4 554 Gene3D G3DSA:3.30.420.40 42 289 2.3E-77 T 14-10-2018 PACID_33630 2f2910ae508c08d96a6541ef99a915a6 502 Pfam PF00171 Aldehyde dehydrogenase family 18 468 4.2E-134 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_33630 2f2910ae508c08d96a6541ef99a915a6 502 Gene3D G3DSA:3.40.605.10 18 465 1.1E-141 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_33630 2f2910ae508c08d96a6541ef99a915a6 502 SUPERFAMILY SSF53720 9 469 9.29E-132 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_33630 2f2910ae508c08d96a6541ef99a915a6 502 Gene3D G3DSA:3.40.309.10 246 437 1.1E-141 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_33630 2f2910ae508c08d96a6541ef99a915a6 502 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PACID_07800 e90ba571d57ff3f6d74db6397a3cbdab 144 Gene3D G3DSA:3.40.50.620 5 138 7.8E-31 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_07800 e90ba571d57ff3f6d74db6397a3cbdab 144 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 7 71 2.8E-14 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PACID_07800 e90ba571d57ff3f6d74db6397a3cbdab 144 Pfam PF01467 Cytidylyltransferase-like 9 134 5.8E-13 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PACID_07800 e90ba571d57ff3f6d74db6397a3cbdab 144 SUPERFAMILY SSF52374 6 139 8.59E-21 T 14-10-2018 PACID_13230 63f2692e8d833a8570493e16f6632009 118 Pfam PF13397 RNA polymerase-binding protein 5 108 2.3E-40 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 PACID_13230 63f2692e8d833a8570493e16f6632009 118 Gene3D G3DSA:2.20.28.270 3 79 2.0E-13 T 14-10-2018 IPR038638 RbpA superfamily PACID_13230 63f2692e8d833a8570493e16f6632009 118 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 17 113 23.647 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 PACID_13230 63f2692e8d833a8570493e16f6632009 118 ProSitePatterns PS00202 Rubredoxin signature. 51 61 - T 14-10-2018 IPR018527 Rubredoxin, iron-binding site GO:0046872 PACID_14890 429333666165de633c12b30a90d3b42f 367 Gene3D G3DSA:3.40.50.300 25 227 1.5E-44 T 14-10-2018 PACID_14890 429333666165de633c12b30a90d3b42f 367 PIRSF PIRSF002849 7 345 5.5E-127 T 14-10-2018 PACID_14890 429333666165de633c12b30a90d3b42f 367 SUPERFAMILY SSF52540 36 315 1.03E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14890 429333666165de633c12b30a90d3b42f 367 Gene3D G3DSA:1.10.8.300 228 340 1.0E-35 T 14-10-2018 PACID_14890 429333666165de633c12b30a90d3b42f 367 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 64 194 3.9E-59 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PACID_27980 52bd06db9a6245a97b8586c1981e2680 255 SUPERFAMILY SSF53254 28 222 6.19E-34 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_27980 52bd06db9a6245a97b8586c1981e2680 255 Gene3D G3DSA:3.40.50.1240 17 224 8.7E-30 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_27980 52bd06db9a6245a97b8586c1981e2680 255 SMART SM00855 30 184 8.8E-18 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_27980 52bd06db9a6245a97b8586c1981e2680 255 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 31 217 1.7E-32 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 Gene3D G3DSA:3.40.50.150 9 218 1.2E-30 T 14-10-2018 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 Pfam PF07669 Eco57I restriction-modification methylase 102 197 1.7E-8 T 14-10-2018 IPR011639 Restriction modification methylase Eco57I GO:0003677|GO:0003824|GO:0006304 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 SMART SM00650 14 173 4.2E-4 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 Pfam PF00398 Ribosomal RNA adenine dimethylase 7 96 4.0E-6 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 32 46 5.3E-15 T 14-10-2018 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 133 157 5.3E-15 T 14-10-2018 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 6 22 5.3E-15 T 14-10-2018 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 102 114 5.3E-15 T 14-10-2018 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 105 111 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PACID_23000 8219847ca49e8f67a9b191c22c028acc 437 SUPERFAMILY SSF53335 2 226 3.88E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_21310 73064243f7ed4a81f142bb5549df896a 257 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 9 238 2.4E-26 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_21310 73064243f7ed4a81f142bb5549df896a 257 Gene3D G3DSA:3.10.20.30 1 121 2.9E-25 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PACID_21310 73064243f7ed4a81f142bb5549df896a 257 Gene3D G3DSA:1.10.1060.10 135 249 1.4E-14 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_21310 73064243f7ed4a81f142bb5549df896a 257 SUPERFAMILY SSF46548 124 245 2.44E-23 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_21310 73064243f7ed4a81f142bb5549df896a 257 Pfam PF13183 4Fe-4S dicluster domain 161 233 1.1E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_21310 73064243f7ed4a81f142bb5549df896a 257 SUPERFAMILY SSF54292 2 121 1.85E-20 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 PACID_21310 73064243f7ed4a81f142bb5549df896a 257 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 PACID_21310 73064243f7ed4a81f142bb5549df896a 257 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 4 125 2.7E-23 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_21310 73064243f7ed4a81f142bb5549df896a 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 164 175 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_16990 a49cbc6414b833cb76a41c562e27b82e 414 PIRSF PIRSF000443 22 394 1.6E-122 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 PACID_16990 a49cbc6414b833cb76a41c562e27b82e 414 SUPERFAMILY SSF53474 37 386 2.73E-90 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_16990 a49cbc6414b833cb76a41c562e27b82e 414 TIGRFAM TIGR01392 homoserO_Ac_trn: homoserine O-acetyltransferase 37 385 1.1E-126 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 PACID_16990 a49cbc6414b833cb76a41c562e27b82e 414 Gene3D G3DSA:1.10.1740.110 201 306 1.5E-130 T 14-10-2018 PACID_16990 a49cbc6414b833cb76a41c562e27b82e 414 Pfam PF00561 alpha/beta hydrolase fold 66 371 7.3E-29 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_16990 a49cbc6414b833cb76a41c562e27b82e 414 Hamap MF_00296 Homoserine O-acetyltransferase [metXA]. 26 386 29.144 T 14-10-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 PACID_16990 a49cbc6414b833cb76a41c562e27b82e 414 Gene3D G3DSA:3.40.50.1820 42 379 1.5E-130 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_19930 223765e20728597f7605f0036d927b77 499 Gene3D G3DSA:3.10.105.10 269 472 1.1E-90 T 14-10-2018 PACID_19930 223765e20728597f7605f0036d927b77 499 Gene3D G3DSA:3.40.190.10 189 482 1.1E-90 T 14-10-2018 PACID_19930 223765e20728597f7605f0036d927b77 499 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 404 7.3E-68 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PACID_19930 223765e20728597f7605f0036d927b77 499 SUPERFAMILY SSF53850 30 491 2.71E-100 T 14-10-2018 PACID_19930 223765e20728597f7605f0036d927b77 499 Gene3D G3DSA:3.90.76.10 44 188 1.1E-90 T 14-10-2018 PACID_19930 223765e20728597f7605f0036d927b77 499 PIRSF PIRSF002741 23 493 1.4E-67 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PACID_29330 dfa9f001913022fc063939a04fe3dd45 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 247 332 2.0E-24 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_29330 dfa9f001913022fc063939a04fe3dd45 343 Gene3D G3DSA:3.40.50.300 15 342 1.2E-93 T 14-10-2018 PACID_29330 dfa9f001913022fc063939a04fe3dd45 343 SMART SM00382 46 258 8.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_29330 dfa9f001913022fc063939a04fe3dd45 343 SUPERFAMILY SSF52540 17 267 2.93E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_29330 dfa9f001913022fc063939a04fe3dd45 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 1.4E-19 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 PACID_29330 dfa9f001913022fc063939a04fe3dd45 343 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_29330 dfa9f001913022fc063939a04fe3dd45 343 Pfam PF00005 ABC transporter 38 196 4.4E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_25030 a89917992b80912ce8b75f52b5d0c20b 176 ProSitePatterns PS00018 EF-hand calcium-binding domain. 59 71 - T 14-10-2018 IPR018247 EF-Hand 1, calcium-binding site PACID_25030 a89917992b80912ce8b75f52b5d0c20b 176 Gene3D G3DSA:3.40.630.30 2 164 1.3E-32 T 14-10-2018 PACID_25030 a89917992b80912ce8b75f52b5d0c20b 176 Pfam PF00583 Acetyltransferase (GNAT) family 42 134 1.5E-10 T 14-10-2018 IPR000182 GNAT domain PACID_25030 a89917992b80912ce8b75f52b5d0c20b 176 SUPERFAMILY SSF55729 1 157 1.3E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_00310 7ff6beddf6d8e366c22e63e4c97473b3 149 SUPERFAMILY SSF54631 8 141 3.28E-13 T 14-10-2018 PACID_00310 7ff6beddf6d8e366c22e63e4c97473b3 149 Pfam PF00571 CBS domain 99 141 3.0E-4 T 14-10-2018 IPR000644 CBS domain PACID_00310 7ff6beddf6d8e366c22e63e4c97473b3 149 Gene3D G3DSA:3.10.580.10 1 145 3.9E-47 T 14-10-2018 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 Gene3D G3DSA:1.10.1380.10 43 450 1.1E-228 T 14-10-2018 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 Gene3D G3DSA:3.40.390.10 12 671 1.1E-228 T 14-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 Pfam PF05649 Peptidase family M13 17 411 2.5E-90 T 14-10-2018 IPR008753 Peptidase M13, N-terminal domain GO:0006508 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 Pfam PF01431 Peptidase family M13 463 668 2.9E-69 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 569 580 1.8E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 455 467 1.8E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 494 510 1.8E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 PRINTS PR00786 Neprilysin metalloprotease (M13) family signature 473 485 1.8E-21 T 14-10-2018 IPR018497 Peptidase M13, C-terminal domain GO:0004222|GO:0006508 PACID_26170 c9e6ba12e5fa5927e619434251b81368 671 SUPERFAMILY SSF55486 6 671 3.66E-198 T 14-10-2018 PACID_07110 58de5b4e554ca0eeee06120488150209 385 SMART SM00271 9 67 1.4E-22 T 14-10-2018 IPR001623 DnaJ domain PACID_07110 58de5b4e554ca0eeee06120488150209 385 SUPERFAMILY SSF49493 276 359 5.49E-21 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PACID_07110 58de5b4e554ca0eeee06120488150209 385 Gene3D G3DSA:1.10.287.110 7 129 1.3E-27 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PACID_07110 58de5b4e554ca0eeee06120488150209 385 Pfam PF00684 DnaJ central domain 163 224 1.4E-12 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 PACID_07110 58de5b4e554ca0eeee06120488150209 385 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 10 366 2.8E-120 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PACID_07110 58de5b4e554ca0eeee06120488150209 385 PRINTS PR00625 DnaJ domain signature 47 67 4.4E-18 T 14-10-2018 IPR001623 DnaJ domain PACID_07110 58de5b4e554ca0eeee06120488150209 385 PRINTS PR00625 DnaJ domain signature 67 86 4.4E-18 T 14-10-2018 IPR001623 DnaJ domain PACID_07110 58de5b4e554ca0eeee06120488150209 385 PRINTS PR00625 DnaJ domain signature 12 30 4.4E-18 T 14-10-2018 IPR001623 DnaJ domain PACID_07110 58de5b4e554ca0eeee06120488150209 385 PRINTS PR00625 DnaJ domain signature 30 45 4.4E-18 T 14-10-2018 IPR001623 DnaJ domain PACID_07110 58de5b4e554ca0eeee06120488150209 385 ProSitePatterns PS00636 Nt-dnaJ domain signature. 52 71 - T 14-10-2018 IPR018253 DnaJ domain, conserved site PACID_07110 58de5b4e554ca0eeee06120488150209 385 Gene3D G3DSA:2.60.260.20 274 375 2.8E-26 T 14-10-2018 PACID_07110 58de5b4e554ca0eeee06120488150209 385 SUPERFAMILY SSF57938 150 226 1.7E-17 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily PACID_07110 58de5b4e554ca0eeee06120488150209 385 SUPERFAMILY SSF46565 6 92 2.49E-26 T 14-10-2018 IPR036869 Chaperone J-domain superfamily PACID_07110 58de5b4e554ca0eeee06120488150209 385 Gene3D G3DSA:2.10.230.10 161 228 1.6E-18 T 14-10-2018 PACID_07110 58de5b4e554ca0eeee06120488150209 385 Pfam PF00226 DnaJ domain 10 72 1.5E-22 T 14-10-2018 IPR001623 DnaJ domain PACID_07110 58de5b4e554ca0eeee06120488150209 385 Pfam PF01556 DnaJ C terminal domain 137 350 1.1E-35 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal PACID_07110 58de5b4e554ca0eeee06120488150209 385 SUPERFAMILY SSF49493 130 283 4.06E-19 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 PACID_07110 58de5b4e554ca0eeee06120488150209 385 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 7 376 36.448 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 PACID_10710 54c11a68da8cf61da681dd415a2dee83 128 Gene3D G3DSA:3.40.630.30 8 128 7.9E-14 T 14-10-2018 PACID_10710 54c11a68da8cf61da681dd415a2dee83 128 SUPERFAMILY SSF55729 14 112 2.23E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_10710 54c11a68da8cf61da681dd415a2dee83 128 Pfam PF00583 Acetyltransferase (GNAT) family 27 109 1.3E-7 T 14-10-2018 IPR000182 GNAT domain PACID_19480 5484740513f75492a37ed04833cc38d3 278 Gene3D G3DSA:3.40.50.1110 80 273 3.9E-7 T 14-10-2018 IPR036514 SGNH hydrolase superfamily PACID_19480 5484740513f75492a37ed04833cc38d3 278 SUPERFAMILY SSF52266 100 273 5.5E-7 T 14-10-2018 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 463 70.928 T 14-10-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 Gene3D G3DSA:3.90.1260.10 74 367 9.1E-113 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 SUPERFAMILY SSF52402 4 187 1.4E-28 T 14-10-2018 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 420 1.7E-135 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 Gene3D G3DSA:3.40.50.620 14 191 9.1E-113 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 Gene3D G3DSA:1.10.287.400 377 439 7.5E-29 T 14-10-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 Pfam PF00764 Arginosuccinate synthase 16 392 2.4E-57 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PACID_30900 116ceee9e2cd8545e5e63062c4d2a16c 472 SUPERFAMILY SSF69864 190 433 1.7E-77 T 14-10-2018 PACID_28410 56f9aeb2e1565a5a0bf01aa1ec08a17e 106 Pfam PF11774 Lsr2 1 104 3.0E-36 T 14-10-2018 IPR024412 Lsr2 PACID_28410 56f9aeb2e1565a5a0bf01aa1ec08a17e 106 ProDom PD026347 LSR2-LIKE LSR2 ANTIGEN IMMUNE PRECURSOR RESPONSE SIGNAL PLASMID LYSYL GP61 1 90 1.0E-13 T 14-10-2018 IPR024412 Lsr2 PACID_28410 56f9aeb2e1565a5a0bf01aa1ec08a17e 106 Gene3D G3DSA:1.20.890.50 72 106 1.3E-11 T 14-10-2018 PACID_28410 56f9aeb2e1565a5a0bf01aa1ec08a17e 106 Gene3D G3DSA:3.30.60.230 1 60 4.2E-27 T 14-10-2018 PACID_22140 c94c43344900be881e60a7c9ab9eba12 335 Pfam PF01551 Peptidase family M23 65 154 1.6E-10 T 14-10-2018 IPR016047 Peptidase M23 PACID_22140 c94c43344900be881e60a7c9ab9eba12 335 Pfam PF01551 Peptidase family M23 232 330 2.3E-25 T 14-10-2018 IPR016047 Peptidase M23 PACID_22140 c94c43344900be881e60a7c9ab9eba12 335 Gene3D G3DSA:2.70.70.10 32 161 1.4E-15 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_22140 c94c43344900be881e60a7c9ab9eba12 335 Gene3D G3DSA:2.70.70.10 196 335 3.3E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_22140 c94c43344900be881e60a7c9ab9eba12 335 SUPERFAMILY SSF51261 201 334 1.62E-44 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_22140 c94c43344900be881e60a7c9ab9eba12 335 SUPERFAMILY SSF51261 35 159 1.88E-16 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_08960 809f8edafd59c9f7bcd40d754e68cb3b 378 Gene3D G3DSA:1.10.1610.10 22 351 2.7E-127 T 14-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PACID_08960 809f8edafd59c9f7bcd40d754e68cb3b 378 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 26 359 1.8E-129 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PACID_08960 809f8edafd59c9f7bcd40d754e68cb3b 378 Pfam PF02277 Phosphoribosyltransferase 22 359 7.1E-127 T 14-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PACID_08960 809f8edafd59c9f7bcd40d754e68cb3b 378 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 24 361 35.356 T 14-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PACID_08960 809f8edafd59c9f7bcd40d754e68cb3b 378 Gene3D G3DSA:3.40.50.10210 69 342 2.7E-127 T 14-10-2018 PACID_08960 809f8edafd59c9f7bcd40d754e68cb3b 378 SUPERFAMILY SSF52733 18 360 1.44E-115 T 14-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 PACID_24030 97b1c4a8e54921b1faa02229f7f1ea7f 122 Gene3D G3DSA:3.30.2010.20 15 118 2.6E-7 T 14-10-2018 IPR038555 Zincin-like metallopeptidase superfamily PACID_24030 97b1c4a8e54921b1faa02229f7f1ea7f 122 Pfam PF06262 Zincin-like metallopeptidase 41 112 1.3E-6 T 14-10-2018 IPR010428 Zincin-like metallopeptidase PACID_24030 97b1c4a8e54921b1faa02229f7f1ea7f 122 SUPERFAMILY SSF55486 15 118 1.28E-15 T 14-10-2018 PACID_03220 b42640b031c7e9d557ce199754e5b885 435 Pfam PF01610 Transposase 164 419 9.0E-61 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PACID_03220 b42640b031c7e9d557ce199754e5b885 435 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 46 88 1.4E-7 T 14-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PACID_19460 031c3ea577ffb8c70dbb3f09e48b8c0f 662 PIRSF PIRSF001589 1 641 1.6E-160 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PACID_19460 031c3ea577ffb8c70dbb3f09e48b8c0f 662 Gene3D G3DSA:3.60.20.10 3 181 3.5E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_19460 031c3ea577ffb8c70dbb3f09e48b8c0f 662 Pfam PF00733 Asparagine synthase 241 611 3.6E-82 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 PACID_19460 031c3ea577ffb8c70dbb3f09e48b8c0f 662 SUPERFAMILY SSF52402 232 606 7.22E-64 T 14-10-2018 PACID_19460 031c3ea577ffb8c70dbb3f09e48b8c0f 662 Pfam PF13537 Glutamine amidotransferase domain 46 165 4.4E-45 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PACID_19460 031c3ea577ffb8c70dbb3f09e48b8c0f 662 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 560 3.7E-145 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 PACID_19460 031c3ea577ffb8c70dbb3f09e48b8c0f 662 SUPERFAMILY SSF56235 2 221 1.29E-60 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_16830 a19b5b2f5befd2bff01709323fc84af2 540 PIRSF PIRSF006060 2 492 2.6E-98 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_16830 a19b5b2f5befd2bff01709323fc84af2 540 Pfam PF13520 Amino acid permease 27 458 1.3E-55 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_16830 a19b5b2f5befd2bff01709323fc84af2 540 Gene3D G3DSA:1.20.1740.10 21 494 1.6E-121 T 14-10-2018 PACID_17020 63c58d575a7cbee721109ba7996df8a8 296 Gene3D G3DSA:3.30.1240.10 103 211 4.9E-62 T 14-10-2018 PACID_17020 63c58d575a7cbee721109ba7996df8a8 296 SUPERFAMILY SSF56784 25 285 5.44E-55 T 14-10-2018 IPR036412 HAD-like superfamily PACID_17020 63c58d575a7cbee721109ba7996df8a8 296 Pfam PF08282 haloacid dehalogenase-like hydrolase 28 279 1.9E-43 T 14-10-2018 PACID_17020 63c58d575a7cbee721109ba7996df8a8 296 Gene3D G3DSA:3.40.50.1000 28 280 4.9E-62 T 14-10-2018 IPR023214 HAD superfamily PACID_17020 63c58d575a7cbee721109ba7996df8a8 296 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 27 254 7.2E-17 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PACID_04010 0d7a0126fbd817b13eef17dd8b44cbb7 115 SMART SM00418 32 112 1.2E-20 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_04010 0d7a0126fbd817b13eef17dd8b44cbb7 115 SUPERFAMILY SSF46785 23 111 4.12E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_04010 0d7a0126fbd817b13eef17dd8b44cbb7 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 1.6E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_04010 0d7a0126fbd817b13eef17dd8b44cbb7 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 49 1.6E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_04010 0d7a0126fbd817b13eef17dd8b44cbb7 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 1.6E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_04010 0d7a0126fbd817b13eef17dd8b44cbb7 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.6E-14 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_04010 0d7a0126fbd817b13eef17dd8b44cbb7 115 Gene3D G3DSA:1.10.10.10 18 114 1.6E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_04010 0d7a0126fbd817b13eef17dd8b44cbb7 115 Pfam PF12840 Helix-turn-helix domain 33 89 1.1E-13 T 14-10-2018 PACID_04440 40a786f9afb436e9af95c9da4082422c 378 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.8E-11 T 14-10-2018 PACID_04440 40a786f9afb436e9af95c9da4082422c 378 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 314 2.8E-11 T 14-10-2018 PACID_04440 40a786f9afb436e9af95c9da4082422c 378 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 189 207 2.8E-11 T 14-10-2018 PACID_04440 40a786f9afb436e9af95c9da4082422c 378 Gene3D G3DSA:3.50.50.60 2 370 5.9E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_04440 40a786f9afb436e9af95c9da4082422c 378 SUPERFAMILY SSF51905 6 361 4.21E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_04440 40a786f9afb436e9af95c9da4082422c 378 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 223 3.6E-16 T 14-10-2018 PACID_04440 40a786f9afb436e9af95c9da4082422c 378 SUPERFAMILY SSF51905 6 211 6.22E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_23080 3c837551f6dc5524c2e35df4947f6b75 428 Gene3D G3DSA:3.40.630.30 25 157 1.9E-26 T 14-10-2018 PACID_23080 3c837551f6dc5524c2e35df4947f6b75 428 Gene3D G3DSA:3.40.630.30 158 315 2.4E-33 T 14-10-2018 PACID_23080 3c837551f6dc5524c2e35df4947f6b75 428 SUPERFAMILY SSF55729 76 322 1.21E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_23080 3c837551f6dc5524c2e35df4947f6b75 428 SUPERFAMILY SSF55718 323 426 2.75E-15 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PACID_23080 3c837551f6dc5524c2e35df4947f6b75 428 Pfam PF13527 Acetyltransferase (GNAT) domain 76 153 7.8E-17 T 14-10-2018 PACID_23080 3c837551f6dc5524c2e35df4947f6b75 428 Gene3D G3DSA:3.30.1050.10 321 419 1.8E-22 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily PACID_23080 3c837551f6dc5524c2e35df4947f6b75 428 Pfam PF13530 Sterol carrier protein domain 203 422 4.6E-44 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain PACID_26640 0e47900dc7c5e9dacc3fce2c62ac3855 263 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 11 232 1.2E-44 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_26640 0e47900dc7c5e9dacc3fce2c62ac3855 263 SUPERFAMILY SSF56784 7 257 2.1E-65 T 14-10-2018 IPR036412 HAD-like superfamily PACID_26640 0e47900dc7c5e9dacc3fce2c62ac3855 263 Pfam PF13242 HAD-hyrolase-like 183 256 1.7E-22 T 14-10-2018 PACID_26640 0e47900dc7c5e9dacc3fce2c62ac3855 263 Pfam PF13344 Haloacid dehalogenase-like hydrolase 10 109 2.6E-23 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_26640 0e47900dc7c5e9dacc3fce2c62ac3855 263 PIRSF PIRSF000915 4 118 5.9E-23 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_26640 0e47900dc7c5e9dacc3fce2c62ac3855 263 PIRSF PIRSF000915 109 262 2.1E-32 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_26640 0e47900dc7c5e9dacc3fce2c62ac3855 263 Gene3D G3DSA:3.40.50.1000 87 183 2.1E-76 T 14-10-2018 IPR023214 HAD superfamily PACID_26640 0e47900dc7c5e9dacc3fce2c62ac3855 263 Gene3D G3DSA:3.40.50.1000 10 246 2.1E-76 T 14-10-2018 IPR023214 HAD superfamily PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 315 8.9E-128 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 SUPERFAMILY SSF52490 10 206 7.2E-68 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 ProSitePatterns PS01134 FtsZ protein signature 1. 42 76 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 Gene3D G3DSA:3.30.1330.20 219 323 5.4E-39 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 SMART SM00865 205 322 9.3E-56 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 SMART SM00864 11 203 1.1E-107 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 PRINTS PR00423 Cell division protein FtsZ signature 96 116 2.0E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 PRINTS PR00423 Cell division protein FtsZ signature 210 231 2.0E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 PRINTS PR00423 Cell division protein FtsZ signature 124 145 2.0E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 PRINTS PR00423 Cell division protein FtsZ signature 187 209 2.0E-50 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 SUPERFAMILY SSF55307 202 316 4.35E-43 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 Pfam PF12327 FtsZ family, C-terminal domain 220 314 5.7E-35 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 12 170 9.5E-38 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 7 367 38.151 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 Gene3D G3DSA:3.40.50.1440 1 218 2.2E-81 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 PACID_12880 80c6d665e374047bcd5e6faafcd1beca 399 ProSitePatterns PS01135 FtsZ protein signature 2. 95 116 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 PACID_26240 8a9ed868f9e77f3ff036b8b7315d2c17 261 PIRSF PIRSF018982 1 248 1.0E-78 T 14-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 PACID_26240 8a9ed868f9e77f3ff036b8b7315d2c17 261 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 3 239 3.6E-80 T 14-10-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 PACID_26240 8a9ed868f9e77f3ff036b8b7315d2c17 261 Gene3D G3DSA:1.10.30.40 1 47 3.4E-8 T 14-10-2018 PACID_26240 8a9ed868f9e77f3ff036b8b7315d2c17 261 Gene3D G3DSA:3.40.50.11240 59 238 1.9E-54 T 14-10-2018 PACID_21370 84c92c0b0ed4a9dcaf45cdb569253b42 133 Gene3D G3DSA:3.30.1320.10 1 113 1.6E-29 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21370 84c92c0b0ed4a9dcaf45cdb569253b42 133 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 23.494 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21370 84c92c0b0ed4a9dcaf45cdb569253b42 133 SUPERFAMILY SSF54565 3 89 2.35E-32 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21370 84c92c0b0ed4a9dcaf45cdb569253b42 133 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 14-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_21370 84c92c0b0ed4a9dcaf45cdb569253b42 133 Pfam PF00886 Ribosomal protein S16 9 67 1.4E-22 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21370 84c92c0b0ed4a9dcaf45cdb569253b42 133 TIGRFAM TIGR00002 S16: ribosomal protein bS16 4 79 1.5E-30 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_19540 e3e5f081b51aa12d732ec8f106195a89 448 Gene3D G3DSA:3.40.50.2000 35 402 1.3E-42 T 14-10-2018 PACID_19540 e3e5f081b51aa12d732ec8f106195a89 448 Pfam PF13692 Glycosyl transferases group 1 226 370 3.0E-17 T 14-10-2018 PACID_19540 e3e5f081b51aa12d732ec8f106195a89 448 Gene3D G3DSA:3.40.50.2000 205 385 1.3E-42 T 14-10-2018 PACID_19540 e3e5f081b51aa12d732ec8f106195a89 448 SUPERFAMILY SSF53756 29 405 2.3E-51 T 14-10-2018 PACID_19540 e3e5f081b51aa12d732ec8f106195a89 448 Pfam PF13579 Glycosyl transferase 4-like domain 35 204 2.9E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_26720 a52158dc39196fe5e3b8c3f98e72ca25 369 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 10 347 34.159 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 PACID_26720 a52158dc39196fe5e3b8c3f98e72ca25 369 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 13 346 3.6E-99 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 PACID_26720 a52158dc39196fe5e3b8c3f98e72ca25 369 Gene3D G3DSA:3.20.20.70 9 369 9.5E-116 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_26720 a52158dc39196fe5e3b8c3f98e72ca25 369 PIRSF PIRSF003314 7 356 6.6E-103 T 14-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 PACID_26720 a52158dc39196fe5e3b8c3f98e72ca25 369 Pfam PF01070 FMN-dependent dehydrogenase 179 339 1.5E-18 T 14-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 PACID_26720 a52158dc39196fe5e3b8c3f98e72ca25 369 SUPERFAMILY SSF51395 37 358 1.01E-75 T 14-10-2018 PACID_18470 96061dca988db6b9c046445af814106e 415 Gene3D G3DSA:1.10.1200.80 301 366 9.4E-10 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 PACID_18470 96061dca988db6b9c046445af814106e 415 SUPERFAMILY SSF51395 55 360 6.13E-79 T 14-10-2018 PACID_18470 96061dca988db6b9c046445af814106e 415 Gene3D G3DSA:3.20.20.70 52 295 3.4E-72 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_18470 96061dca988db6b9c046445af814106e 415 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 54 364 7.3E-104 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 PACID_18470 96061dca988db6b9c046445af814106e 415 Pfam PF01207 Dihydrouridine synthase (Dus) 57 360 7.6E-87 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 PACID_11710 3075a675820650e076ec19f0a04a78e7 182 Pfam PF07336 Putative stress-induced transcription regulator 14 128 7.4E-12 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator PACID_11710 3075a675820650e076ec19f0a04a78e7 182 Gene3D G3DSA:1.10.3300.10 2 181 9.1E-39 T 14-10-2018 IPR023286 ABATE domain superfamily PACID_11710 3075a675820650e076ec19f0a04a78e7 182 SUPERFAMILY SSF160904 1 179 9.68E-41 T 14-10-2018 PACID_11710 3075a675820650e076ec19f0a04a78e7 182 Pfam PF11706 CGNR zinc finger 137 180 4.4E-16 T 14-10-2018 IPR021005 Zinc finger, CGNR PACID_26000 ec0aec5e163835336cfdee383bbf1a02 421 Pfam PF12897 Alanine-glyoxylate amino-transferase 8 421 3.4E-171 T 14-10-2018 IPR024551 Aminotransferase, putative PACID_26000 ec0aec5e163835336cfdee383bbf1a02 421 Gene3D G3DSA:3.40.640.10 61 302 1.1E-165 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_26000 ec0aec5e163835336cfdee383bbf1a02 421 SUPERFAMILY SSF53383 62 410 1.26E-49 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_26000 ec0aec5e163835336cfdee383bbf1a02 421 Gene3D G3DSA:3.90.1150.10 25 414 1.1E-165 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_02210 00c35bd97ca6e00e55a908d8cb504907 450 Pfam PF02687 FtsX-like permease family 92 178 4.9E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_13250 5c7195779beabaa1f953117c15375829 118 Pfam PF14017 Protein of unknown function (DUF4233) 15 113 6.1E-23 T 14-10-2018 IPR025327 Protein of unknown function DUF4233 PACID_17500 6cca6b0bca49a7e4948f776975aeb383 229 Pfam PF00227 Proteasome subunit 24 194 1.7E-16 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 PACID_17500 6cca6b0bca49a7e4948f776975aeb383 229 Gene3D G3DSA:3.60.20.10 1 228 1.4E-51 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_17500 6cca6b0bca49a7e4948f776975aeb383 229 TIGRFAM TIGR03691 20S_bact_alpha: proteasome, alpha subunit 1 223 2.2E-75 T 14-10-2018 IPR022296 Proteasome, alpha subunit, bacterial GO:0004298|GO:0019773|GO:0051603 PACID_17500 6cca6b0bca49a7e4948f776975aeb383 229 SUPERFAMILY SSF56235 10 226 1.98E-30 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_23590 65a4f83c387f0d78547b05847133a37a 219 PIRSF PIRSF006648 7 103 1.1E-13 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_23590 65a4f83c387f0d78547b05847133a37a 219 PIRSF PIRSF006648 91 219 9.3E-25 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_23590 65a4f83c387f0d78547b05847133a37a 219 Pfam PF01061 ABC-2 type transporter 73 185 1.6E-15 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PACID_21340 3ffee1b0736a4922cf36088b161b81b0 250 Gene3D G3DSA:1.10.1270.20 179 245 4.1E-28 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PACID_21340 3ffee1b0736a4922cf36088b161b81b0 250 SUPERFAMILY SSF75217 5 238 1.31E-85 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PACID_21340 3ffee1b0736a4922cf36088b161b81b0 250 Gene3D G3DSA:3.40.1280.10 4 178 2.8E-64 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PACID_21340 3ffee1b0736a4922cf36088b161b81b0 250 PIRSF PIRSF000386 5 246 1.4E-85 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PACID_21340 3ffee1b0736a4922cf36088b161b81b0 250 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 26 232 1.2E-61 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PACID_21340 3ffee1b0736a4922cf36088b161b81b0 250 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 250 92.628 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PACID_21340 3ffee1b0736a4922cf36088b161b81b0 250 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 6 235 1.7E-70 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 PACID_06940 464d7cc143e271b2de16d1bb6c57c4ad 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 191 5.2E-27 T 14-10-2018 PACID_06940 464d7cc143e271b2de16d1bb6c57c4ad 220 Gene3D G3DSA:1.10.150.240 21 87 7.1E-48 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PACID_06940 464d7cc143e271b2de16d1bb6c57c4ad 220 SUPERFAMILY SSF56784 8 218 1.21E-43 T 14-10-2018 IPR036412 HAD-like superfamily PACID_06940 464d7cc143e271b2de16d1bb6c57c4ad 220 Gene3D G3DSA:3.40.50.1000 10 207 7.1E-48 T 14-10-2018 IPR023214 HAD superfamily PACID_21230 2990ac1145f308f2392a3cee7e26d7fd 540 Gene3D G3DSA:3.30.420.40 18 269 6.7E-39 T 14-10-2018 PACID_21230 2990ac1145f308f2392a3cee7e26d7fd 540 SUPERFAMILY SSF53067 22 268 7.4E-29 T 14-10-2018 PACID_21230 2990ac1145f308f2392a3cee7e26d7fd 540 Gene3D G3DSA:3.30.420.40 270 534 1.4E-15 T 14-10-2018 PACID_21230 2990ac1145f308f2392a3cee7e26d7fd 540 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 22 267 5.3E-16 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_21230 2990ac1145f308f2392a3cee7e26d7fd 540 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 478 3.7E-25 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_21230 2990ac1145f308f2392a3cee7e26d7fd 540 SUPERFAMILY SSF53067 22 478 1.64E-10 T 14-10-2018 PACID_04550 fac63e142cc4b4ee10a7cf621f3fef9f 314 Pfam PF00892 EamA-like transporter family 158 291 1.2E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_04550 fac63e142cc4b4ee10a7cf621f3fef9f 314 Pfam PF00892 EamA-like transporter family 9 141 9.4E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_04550 fac63e142cc4b4ee10a7cf621f3fef9f 314 SUPERFAMILY SSF103481 195 293 4.97E-12 T 14-10-2018 PACID_04550 fac63e142cc4b4ee10a7cf621f3fef9f 314 SUPERFAMILY SSF103481 57 145 6.41E-8 T 14-10-2018 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 SMART SM01382 125 253 2.9E-91 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 Gene3D G3DSA:2.40.50.140 1 115 4.2E-46 T 14-10-2018 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.3E-32 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 Gene3D G3DSA:2.30.30.30 119 196 7.5E-32 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 126 251 1.3E-55 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 SMART SM01383 42 119 7.8E-40 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.0E-127 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 SUPERFAMILY SSF50104 127 271 1.75E-56 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 ProSitePatterns PS00467 Ribosomal protein L2 signature. 219 230 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 PIRSF PIRSF002158 17 275 1.2E-94 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 Gene3D G3DSA:4.10.950.10 197 274 3.0E-32 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 SUPERFAMILY SSF50249 3 126 3.77E-47 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_25730 f11fe02ac6174cad7e759c286f9ee259 278 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.625 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 PACID_27140 2338d485cd706037635cbfd0c3cc02a9 425 Gene3D G3DSA:1.20.1250.20 14 206 6.7E-9 T 14-10-2018 PACID_27140 2338d485cd706037635cbfd0c3cc02a9 425 Gene3D G3DSA:1.20.1250.20 227 407 1.3E-9 T 14-10-2018 PACID_27140 2338d485cd706037635cbfd0c3cc02a9 425 Pfam PF07690 Major Facilitator Superfamily 261 415 2.7E-11 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_27140 2338d485cd706037635cbfd0c3cc02a9 425 SUPERFAMILY SSF103473 52 408 6.02E-24 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_03990 ab590130e9ba323662884f319a314443 269 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 150 164 2.8E-7 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PACID_03990 ab590130e9ba323662884f319a314443 269 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 182 196 2.8E-7 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PACID_03990 ab590130e9ba323662884f319a314443 269 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 120 140 2.8E-7 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PACID_03990 ab590130e9ba323662884f319a314443 269 SMART SM00382 119 252 8.2E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_03990 ab590130e9ba323662884f319a314443 269 Gene3D G3DSA:3.40.50.300 83 268 2.5E-40 T 14-10-2018 PACID_03990 ab590130e9ba323662884f319a314443 269 Pfam PF01695 IstB-like ATP binding protein 75 251 1.4E-53 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 PACID_03990 ab590130e9ba323662884f319a314443 269 SUPERFAMILY SSF52540 93 248 2.29E-23 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03990 ab590130e9ba323662884f319a314443 269 PIRSF PIRSF003073 19 269 1.1E-79 T 14-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein PACID_01090 b1e7e57b9f4d8ed18accbbe985dd96e4 401 Gene3D G3DSA:3.90.1150.10 47 379 3.3E-122 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_01090 b1e7e57b9f4d8ed18accbbe985dd96e4 401 SUPERFAMILY SSF53383 53 383 6.33E-78 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_01090 b1e7e57b9f4d8ed18accbbe985dd96e4 401 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 251 260 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 PACID_01090 b1e7e57b9f4d8ed18accbbe985dd96e4 401 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 40 387 50.859 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PACID_01090 b1e7e57b9f4d8ed18accbbe985dd96e4 401 Pfam PF00155 Aminotransferase class I and II 61 382 1.4E-54 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_01090 b1e7e57b9f4d8ed18accbbe985dd96e4 401 Gene3D G3DSA:3.40.640.10 74 299 3.3E-122 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_01090 b1e7e57b9f4d8ed18accbbe985dd96e4 401 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 43 384 4.6E-91 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 PACID_01090 b1e7e57b9f4d8ed18accbbe985dd96e4 401 Hamap MF_01513 Putative phenylalanine aminotransferase [pat]. 42 388 44.943 T 14-10-2018 IPR024892 Putative phenylalanine aminotransferase PACID_08950 e0751de1933cf1ba4100633250fdadb3 244 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 3 238 1.3E-61 T 14-10-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 PACID_23910 e8086089eaa029bd8045f3080b732a76 104 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 26 97 2.8E-20 T 14-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 PACID_23910 e8086089eaa029bd8045f3080b732a76 104 Gene3D G3DSA:3.30.1390.10 14 98 5.7E-17 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PACID_23910 e8086089eaa029bd8045f3080b732a76 104 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 25 103 15.641 T 14-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS PACID_23910 e8086089eaa029bd8045f3080b732a76 104 SUPERFAMILY SSF54736 25 100 8.37E-22 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like PACID_21080 de69f84f12c67a2cb060c62db33bea0b 354 Pfam PF13358 DDE superfamily endonuclease 187 303 1.1E-20 T 14-10-2018 IPR038717 Tc1-like transposase, DDE domain PACID_21080 de69f84f12c67a2cb060c62db33bea0b 354 SUPERFAMILY SSF53098 188 329 1.74E-7 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_21080 de69f84f12c67a2cb060c62db33bea0b 354 SUPERFAMILY SSF46689 17 120 5.38E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_21080 de69f84f12c67a2cb060c62db33bea0b 354 Pfam PF13565 Homeodomain-like domain 44 116 1.8E-12 T 14-10-2018 PACID_07130 f9405fe1f6c3b8f072115347bb42b533 347 SUPERFAMILY SSF51735 139 312 2.08E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_07130 f9405fe1f6c3b8f072115347bb42b533 347 SMART SM00829 12 338 6.4E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_07130 f9405fe1f6c3b8f072115347bb42b533 347 Pfam PF00107 Zinc-binding dehydrogenase 178 302 5.0E-25 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_07130 f9405fe1f6c3b8f072115347bb42b533 347 SUPERFAMILY SSF50129 2 182 7.0E-48 T 14-10-2018 IPR011032 GroES-like superfamily PACID_07130 f9405fe1f6c3b8f072115347bb42b533 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 135 2.3E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_07130 f9405fe1f6c3b8f072115347bb42b533 347 Gene3D G3DSA:3.90.180.10 4 347 8.7E-90 T 14-10-2018 PACID_07130 f9405fe1f6c3b8f072115347bb42b533 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 63 77 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_33800 28dcf412b98ed1b293710368625de54a 309 Gene3D G3DSA:1.10.3720.10 40 282 6.7E-64 T 14-10-2018 IPR035906 MetI-like superfamily PACID_33800 28dcf412b98ed1b293710368625de54a 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 274 3.3E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_33800 28dcf412b98ed1b293710368625de54a 309 SUPERFAMILY SSF161098 45 270 3.27E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_21440 43fc2df93e8ed61b215eca087b89ecd8 370 Pfam PF00535 Glycosyl transferase family 2 38 197 2.6E-22 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PACID_21440 43fc2df93e8ed61b215eca087b89ecd8 370 Gene3D G3DSA:3.90.550.10 28 268 7.4E-46 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_21440 43fc2df93e8ed61b215eca087b89ecd8 370 SUPERFAMILY SSF53448 35 278 1.75E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_06070 5c04a3799ef9b1716f06b62439f28b15 407 Pfam PF07690 Major Facilitator Superfamily 24 252 1.3E-12 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_06070 5c04a3799ef9b1716f06b62439f28b15 407 Gene3D G3DSA:1.20.1250.20 218 397 2.4E-12 T 14-10-2018 PACID_06070 5c04a3799ef9b1716f06b62439f28b15 407 Gene3D G3DSA:1.20.1250.20 21 200 3.9E-14 T 14-10-2018 PACID_06070 5c04a3799ef9b1716f06b62439f28b15 407 SUPERFAMILY SSF103473 10 402 1.57E-35 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_23550 e171fd1b6d641b1cd6b23a9ae8122fd3 231 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_23550 e171fd1b6d641b1cd6b23a9ae8122fd3 231 SUPERFAMILY SSF52540 1 226 2.35E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23550 e171fd1b6d641b1cd6b23a9ae8122fd3 231 SMART SM00382 30 229 2.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_23550 e171fd1b6d641b1cd6b23a9ae8122fd3 231 Pfam PF00005 ABC transporter 22 178 6.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_23550 e171fd1b6d641b1cd6b23a9ae8122fd3 231 Gene3D G3DSA:3.40.50.300 1 229 1.1E-59 T 14-10-2018 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 Pfam PF09989 CoA enzyme activase uncharacterised domain (DUF2229) 677 895 2.0E-68 T 14-10-2018 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 SUPERFAMILY SSF53067 1 253 1.67E-43 T 14-10-2018 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 Gene3D G3DSA:3.30.420.40 318 572 8.2E-80 T 14-10-2018 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 Gene3D G3DSA:3.30.420.40 96 240 1.1E-67 T 14-10-2018 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 912 1238 2.7E-42 T 14-10-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 Gene3D G3DSA:3.30.420.40 1 255 1.1E-67 T 14-10-2018 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 Gene3D G3DSA:3.30.420.40 412 555 8.2E-80 T 14-10-2018 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 2 255 1.1E-20 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 318 572 9.4E-31 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 PACID_17910 18a2275d8a62bc685f4cc911152d29a0 1443 SUPERFAMILY SSF53067 317 572 9.61E-45 T 14-10-2018 PACID_03530 fac579a77af90a636be3b0c225e68570 416 Gene3D G3DSA:2.40.30.170 73 306 1.9E-39 T 14-10-2018 PACID_03530 fac579a77af90a636be3b0c225e68570 416 Gene3D G3DSA:2.40.50.100 85 212 1.9E-39 T 14-10-2018 PACID_03530 fac579a77af90a636be3b0c225e68570 416 Gene3D G3DSA:2.40.420.20 307 366 1.9E-39 T 14-10-2018 PACID_03530 fac579a77af90a636be3b0c225e68570 416 SUPERFAMILY SSF111369 75 197 1.07E-13 T 14-10-2018 PACID_03530 fac579a77af90a636be3b0c225e68570 416 Gene3D G3DSA:1.10.287.470 120 176 1.9E-39 T 14-10-2018 PACID_03530 fac579a77af90a636be3b0c225e68570 416 Pfam PF13533 Biotin-lipoyl like 89 134 6.0E-10 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PACID_21250 e89a01c03628863834774d7f559ada9f 508 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 7 502 5.4E-136 T 14-10-2018 IPR004482 Mg chelatase-related protein PACID_21250 e89a01c03628863834774d7f559ada9f 508 Pfam PF01078 Magnesium chelatase, subunit ChlI 192 396 2.3E-87 T 14-10-2018 IPR000523 Magnesium chelatase ChlI domain PACID_21250 e89a01c03628863834774d7f559ada9f 508 Gene3D G3DSA:3.30.230.10 40 170 1.1E-11 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_21250 e89a01c03628863834774d7f559ada9f 508 SUPERFAMILY SSF54211 5 169 4.17E-32 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_21250 e89a01c03628863834774d7f559ada9f 508 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 409 503 9.0E-22 T 14-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain PACID_21250 e89a01c03628863834774d7f559ada9f 508 SMART SM00382 212 395 4.5E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_21250 e89a01c03628863834774d7f559ada9f 508 Gene3D G3DSA:3.40.50.300 186 507 3.3E-44 T 14-10-2018 PACID_21250 e89a01c03628863834774d7f559ada9f 508 SUPERFAMILY SSF52540 192 506 2.99E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_21250 e89a01c03628863834774d7f559ada9f 508 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 141 4.3E-33 T 14-10-2018 PACID_02980 fee5fdf3a6d30f855abfdca310a5bf7c 507 SUPERFAMILY SSF53720 15 499 9.42E-156 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_02980 fee5fdf3a6d30f855abfdca310a5bf7c 507 Pfam PF00171 Aldehyde dehydrogenase family 36 493 1.1E-157 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_02980 fee5fdf3a6d30f855abfdca310a5bf7c 507 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 295 306 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 PACID_02980 fee5fdf3a6d30f855abfdca310a5bf7c 507 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 262 269 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PACID_02980 fee5fdf3a6d30f855abfdca310a5bf7c 507 Gene3D G3DSA:3.40.309.10 266 464 2.6E-158 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_02980 fee5fdf3a6d30f855abfdca310a5bf7c 507 Gene3D G3DSA:3.40.605.10 38 492 2.6E-158 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 168 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 Gene3D G3DSA:3.90.110.10 167 446 5.0E-64 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 SUPERFAMILY SSF51735 1 166 5.85E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 Gene3D G3DSA:3.40.50.720 1 164 2.7E-44 T 14-10-2018 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 Pfam PF02056 Family 4 glycosyl hydrolase 3 183 4.3E-35 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 189 201 4.8E-33 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 4.8E-33 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 163 174 4.8E-33 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 4.8E-33 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 4.8E-33 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 4.8E-33 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 4.8E-33 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 193 422 1.9E-40 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 PACID_07420 6e17684faa15971e5d5e757ffe7b917f 449 SUPERFAMILY SSF56327 167 438 6.24E-57 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Pfam PF13245 AAA domain 24 262 6.7E-33 T 14-10-2018 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Gene3D G3DSA:1.10.150.80 621 693 6.1E-18 T 14-10-2018 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Gene3D G3DSA:1.10.486.10 394 415 4.5E-25 T 14-10-2018 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Pfam PF13361 UvrD-like helicase C-terminal domain 284 409 4.8E-16 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Gene3D G3DSA:3.40.50.300 287 393 4.5E-25 T 14-10-2018 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Gene3D G3DSA:3.40.50.300 13 278 3.5E-59 T 14-10-2018 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Gene3D G3DSA:1.10.10.160 111 195 3.5E-59 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Pfam PF13361 UvrD-like helicase C-terminal domain 448 554 6.6E-17 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 SMART SM00341 618 698 4.9E-8 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 SUPERFAMILY SSF47819 619 690 5.23E-18 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Gene3D G3DSA:1.10.486.10 444 485 1.8E-26 T 14-10-2018 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Gene3D G3DSA:3.40.50.300 486 569 1.8E-26 T 14-10-2018 PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 SUPERFAMILY SSF52540 6 571 9.17E-110 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20040 ec3d3ca2081e95503eff5311780f89e2 700 Pfam PF00570 HRDC domain 623 687 4.2E-19 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 PACID_29650 88fd4e565579fbdc2495519ae8f65cb8 178 Gene3D G3DSA:1.20.1260.10 18 178 3.8E-50 T 14-10-2018 IPR012347 Ferritin-like PACID_29650 88fd4e565579fbdc2495519ae8f65cb8 178 ProSitePatterns PS00818 Dps protein family signature 1. 55 71 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 PACID_29650 88fd4e565579fbdc2495519ae8f65cb8 178 SUPERFAMILY SSF47240 23 170 1.62E-47 T 14-10-2018 IPR009078 Ferritin-like superfamily PACID_29650 88fd4e565579fbdc2495519ae8f65cb8 178 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 55 71 2.1E-9 T 14-10-2018 IPR002177 DNA-binding protein Dps PACID_29650 88fd4e565579fbdc2495519ae8f65cb8 178 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 150 168 2.1E-9 T 14-10-2018 IPR002177 DNA-binding protein Dps PACID_29650 88fd4e565579fbdc2495519ae8f65cb8 178 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 79 95 2.1E-9 T 14-10-2018 IPR002177 DNA-binding protein Dps PACID_29650 88fd4e565579fbdc2495519ae8f65cb8 178 Pfam PF00210 Ferritin-like domain 36 174 2.9E-20 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 PACID_29650 88fd4e565579fbdc2495519ae8f65cb8 178 PIRSF PIRSF005900 14 176 1.6E-39 T 14-10-2018 IPR002177 DNA-binding protein Dps PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 SMART SM00421 158 215 2.4E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 SMART SM00448 7 120 1.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 ProSitePatterns PS00622 LuxR-type HTH domain signature. 175 202 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 175 1.4E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 191 1.4E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 191 203 1.4E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 Pfam PF00196 Bacterial regulatory proteins, luxR family 160 214 5.1E-19 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 Gene3D G3DSA:3.40.50.12740 7 221 6.1E-70 T 14-10-2018 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 Pfam PF00072 Response regulator receiver domain 10 120 1.4E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_07230 1dca3f71b9a1bf4e68c97876fd7d3ea3 225 SUPERFAMILY SSF52172 5 192 2.41E-33 T 14-10-2018 IPR011006 CheY-like superfamily PACID_12740 50a595042b5905899fd83051b9fae8ff 419 Pfam PF01882 Protein of unknown function DUF58 200 279 2.1E-22 T 14-10-2018 IPR002881 Domain of unknown function DUF58 PACID_06910 1cf039ea87f79bbde71bef2db31173a7 420 Gene3D G3DSA:3.40.190.10 49 359 1.2E-79 T 14-10-2018 PACID_06910 1cf039ea87f79bbde71bef2db31173a7 420 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 5 26 4.8E-5 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PACID_06910 1cf039ea87f79bbde71bef2db31173a7 420 Gene3D G3DSA:3.40.190.10 149 378 1.2E-79 T 14-10-2018 PACID_06910 1cf039ea87f79bbde71bef2db31173a7 420 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 5 24 0.0012 T 14-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal PACID_06910 1cf039ea87f79bbde71bef2db31173a7 420 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 143 160 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 PACID_06910 1cf039ea87f79bbde71bef2db31173a7 420 SUPERFAMILY SSF53850 27 413 6.86E-48 T 14-10-2018 PACID_06910 1cf039ea87f79bbde71bef2db31173a7 420 Pfam PF13416 Bacterial extracellular solute-binding protein 72 352 5.9E-28 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_02230 22ee63ed3d378c406ccd061938a11bfa 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 260 267 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 PACID_02230 22ee63ed3d378c406ccd061938a11bfa 490 Gene3D G3DSA:3.40.309.10 265 454 1.0E-166 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 PACID_02230 22ee63ed3d378c406ccd061938a11bfa 490 Pfam PF00171 Aldehyde dehydrogenase family 25 481 4.6E-162 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 PACID_02230 22ee63ed3d378c406ccd061938a11bfa 490 SUPERFAMILY SSF53720 12 485 5.63E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 PACID_02230 22ee63ed3d378c406ccd061938a11bfa 490 Gene3D G3DSA:3.40.605.10 21 481 1.0E-166 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_23090 c6d8dbbe5306bed6444ac9fe603ba804 199 Gene3D G3DSA:3.40.630.30 4 196 4.0E-40 T 14-10-2018 PACID_23090 c6d8dbbe5306bed6444ac9fe603ba804 199 SUPERFAMILY SSF55729 8 179 4.01E-30 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_23090 c6d8dbbe5306bed6444ac9fe603ba804 199 Pfam PF13302 Acetyltransferase (GNAT) domain 15 154 1.6E-14 T 14-10-2018 IPR000182 GNAT domain PACID_10920 fb1a128ab6b2526e5d2af02886a8324c 177 Gene3D G3DSA:3.90.1140.10 4 171 8.0E-22 T 14-10-2018 PACID_10920 fb1a128ab6b2526e5d2af02886a8324c 177 SUPERFAMILY SSF55144 16 153 4.45E-14 T 14-10-2018 IPR009097 Cyclic phosphodiesterase PACID_10920 fb1a128ab6b2526e5d2af02886a8324c 177 Pfam PF13563 2'-5' RNA ligase superfamily 32 146 3.1E-18 T 14-10-2018 PACID_14120 cee81e9ffab29ef574ad418e1a90e470 348 SUPERFAMILY SSF50129 1 176 1.18E-44 T 14-10-2018 IPR011032 GroES-like superfamily PACID_14120 cee81e9ffab29ef574ad418e1a90e470 348 Gene3D G3DSA:3.90.180.10 16 338 2.8E-87 T 14-10-2018 PACID_14120 cee81e9ffab29ef574ad418e1a90e470 348 Pfam PF00107 Zinc-binding dehydrogenase 177 310 5.9E-19 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_14120 cee81e9ffab29ef574ad418e1a90e470 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_14120 cee81e9ffab29ef574ad418e1a90e470 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 128 1.0E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_14120 cee81e9ffab29ef574ad418e1a90e470 348 Gene3D G3DSA:3.40.50.720 155 294 2.8E-87 T 14-10-2018 PACID_14120 cee81e9ffab29ef574ad418e1a90e470 348 SMART SM00829 10 346 3.2E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_14120 cee81e9ffab29ef574ad418e1a90e470 348 SUPERFAMILY SSF51735 146 316 1.84E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_22030 5db18aedf0278d1da3aa150f32a221fc 289 Pfam PF01148 Cytidylyltransferase family 25 287 9.5E-52 T 14-10-2018 PACID_22030 5db18aedf0278d1da3aa150f32a221fc 289 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 246 272 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 PACID_18060 92294c09ff47bbba0db18f3dd359d047 252 Gene3D G3DSA:3.20.20.70 3 248 1.1E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_18060 92294c09ff47bbba0db18f3dd359d047 252 SUPERFAMILY SSF51366 6 238 1.59E-63 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PACID_18060 92294c09ff47bbba0db18f3dd359d047 252 Pfam PF00977 Histidine biosynthesis protein 7 232 5.0E-65 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 PACID_18060 92294c09ff47bbba0db18f3dd359d047 252 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 6 239 32.447 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 PACID_18060 92294c09ff47bbba0db18f3dd359d047 252 TIGRFAM TIGR01919 hisA-trpF: bifunctional HisA/TrpF protein 5 239 3.7E-106 T 14-10-2018 IPR010188 Bifunctional HisA/TrpF GO:0000105|GO:0000162|GO:0003949|GO:0004640|GO:0005737 KEGG: 00340+5.3.1.16 PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 PIRSF PIRSF000156 10 911 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 Gene3D G3DSA:3.40.50.970 69 489 4.7E-125 T 14-10-2018 PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 SUPERFAMILY SSF52518 490 718 7.18E-90 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 SUPERFAMILY SSF52518 70 485 2.0E-124 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 SUPERFAMILY SSF52922 722 902 9.42E-51 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 126 309 3.2E-10 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 Gene3D G3DSA:3.40.50.970 490 724 1.4E-103 T 14-10-2018 PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 19 904 0.0 T 14-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 PACID_15020 75c91f8947a04c483458ce5f03d0d40d 917 Gene3D G3DSA:3.40.50.920 726 908 2.4E-63 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 PACID_18220 5a3151e4acac12d31cadf3b37f20d2a5 309 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 16 265 1.1E-50 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PACID_18220 5a3151e4acac12d31cadf3b37f20d2a5 309 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 19 264 2.9E-64 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PACID_18220 5a3151e4acac12d31cadf3b37f20d2a5 309 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 145 157 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PACID_18220 5a3151e4acac12d31cadf3b37f20d2a5 309 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 13 269 16.241 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 507 630 1.0E-10 T 14-10-2018 IPR002178 PTS EIIA type-2 domain PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 Pfam PF00874 PRD domain 287 368 1.4E-8 T 14-10-2018 IPR011608 PRD domain GO:0006355 PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 Pfam PF08279 HTH domain 87 145 3.1E-8 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 Gene3D G3DSA:3.40.930.10 489 631 3.1E-8 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 SUPERFAMILY SSF63520 273 368 3.14E-11 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 SUPERFAMILY SSF55804 490 629 1.74E-17 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 Gene3D G3DSA:1.10.1790.10 277 372 3.5E-9 T 14-10-2018 PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 Gene3D G3DSA:1.10.10.10 72 148 5.4E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_21740 d9a167ee0a140e479a6fcc100d74481d 638 SUPERFAMILY SSF46785 86 139 2.93E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_08300 fd3e73bbd182effacb927b28a6bd3903 175 Pfam PF02542 YgbB family 10 160 8.8E-48 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PACID_08300 fd3e73bbd182effacb927b28a6bd3903 175 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 9 162 31.417 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PACID_08300 fd3e73bbd182effacb927b28a6bd3903 175 SUPERFAMILY SSF69765 9 163 8.11E-50 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PACID_08300 fd3e73bbd182effacb927b28a6bd3903 175 Gene3D G3DSA:3.30.1330.50 5 167 9.8E-58 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PACID_08300 fd3e73bbd182effacb927b28a6bd3903 175 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 10 161 1.2E-46 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PACID_08300 fd3e73bbd182effacb927b28a6bd3903 175 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 44 59 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 PACID_10060 3f497b5d59f412ed0ead9b6473f9364a 348 SUPERFAMILY SSF54909 5 305 5.54E-97 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_10060 3f497b5d59f412ed0ead9b6473f9364a 348 Pfam PF04261 Dyp-type peroxidase family 7 302 3.6E-86 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PACID_10060 3f497b5d59f412ed0ead9b6473f9364a 348 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 8 303 3.9E-77 T 14-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 PACID_06250 bad0d8386f73675d25820a263ad5aa1e 416 Pfam PF07690 Major Facilitator Superfamily 42 260 1.0E-25 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_06250 bad0d8386f73675d25820a263ad5aa1e 416 Gene3D G3DSA:1.20.1250.20 30 413 1.6E-46 T 14-10-2018 PACID_06250 bad0d8386f73675d25820a263ad5aa1e 416 SUPERFAMILY SSF103473 25 412 2.49E-58 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_08600 d2aee2e5909924504a2d26dad456203c 481 SUPERFAMILY SSF143548 15 159 5.23E-39 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PACID_08600 d2aee2e5909924504a2d26dad456203c 481 Pfam PF03315 Serine dehydratase beta chain 2 158 1.0E-52 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PACID_08600 d2aee2e5909924504a2d26dad456203c 481 Gene3D G3DSA:3.30.1330.90 9 161 1.3E-46 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 PACID_08600 d2aee2e5909924504a2d26dad456203c 481 Pfam PF03313 Serine dehydratase alpha chain 191 475 4.0E-96 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit PACID_08600 d2aee2e5909924504a2d26dad456203c 481 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 1 478 6.2E-182 T 14-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 PACID_04410 0609a43c0c49060abe539c2131a94fc7 196 Pfam PF01844 HNH endonuclease 110 137 5.7E-6 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PACID_04410 0609a43c0c49060abe539c2131a94fc7 196 SMART SM00507 88 140 1.2E-9 T 14-10-2018 IPR003615 HNH nuclease PACID_04410 0609a43c0c49060abe539c2131a94fc7 196 Gene3D G3DSA:3.30.40.60 78 138 1.5E-5 T 14-10-2018 PACID_04410 0609a43c0c49060abe539c2131a94fc7 196 Pfam PF02720 Domain of unknown function (DUF222) 31 97 5.3E-6 T 14-10-2018 IPR003870 Domain of unknown function DUF222 PACID_24150 d5c3bba6c442ef61c04979b0c9ce11c2 166 Pfam PF03703 Bacterial PH domain 77 148 2.0E-19 T 14-10-2018 IPR005182 Domain of unknown function DUF304 PACID_01710 db049d34f5492960b0b6bf043769b3f6 246 PIRSF PIRSF000857 2 246 2.3E-86 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PACID_01710 db049d34f5492960b0b6bf043769b3f6 246 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 51 221 2.8E-37 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 PACID_01710 db049d34f5492960b0b6bf043769b3f6 246 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 245 1.4E-57 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 PACID_01710 db049d34f5492960b0b6bf043769b3f6 246 Gene3D G3DSA:3.40.50.620 11 246 1.5E-66 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_01710 db049d34f5492960b0b6bf043769b3f6 246 SUPERFAMILY SSF52402 25 207 3.44E-40 T 14-10-2018 PACID_19210 f018d693354dfe6125291f829d77e714 273 Pfam PF00085 Thioredoxin 2 100 1.9E-6 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 PACID_19210 f018d693354dfe6125291f829d77e714 273 Gene3D G3DSA:3.40.30.10 1 106 9.4E-11 T 14-10-2018 PACID_19210 f018d693354dfe6125291f829d77e714 273 SUPERFAMILY SSF52833 2 105 8.9E-12 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_19210 f018d693354dfe6125291f829d77e714 273 Gene3D G3DSA:1.25.40.10 191 273 1.7E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_19210 f018d693354dfe6125291f829d77e714 273 Pfam PF14561 Tetratricopeptide repeat 188 273 5.0E-20 T 14-10-2018 PACID_19210 f018d693354dfe6125291f829d77e714 273 SUPERFAMILY SSF48452 147 270 2.17E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_19510 9496ce0565a97c46cd39dad53b22c9fc 444 Gene3D G3DSA:3.40.50.2000 81 238 4.6E-13 T 14-10-2018 PACID_19510 9496ce0565a97c46cd39dad53b22c9fc 444 Pfam PF13439 Glycosyltransferase Family 4 85 222 1.1E-8 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_19510 9496ce0565a97c46cd39dad53b22c9fc 444 SUPERFAMILY SSF53756 82 369 4.49E-34 T 14-10-2018 PACID_19510 9496ce0565a97c46cd39dad53b22c9fc 444 Pfam PF00534 Glycosyl transferases group 1 246 368 1.4E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_19510 9496ce0565a97c46cd39dad53b22c9fc 444 Gene3D G3DSA:3.40.50.2000 239 412 6.8E-18 T 14-10-2018 PACID_11610 ca67e7ce89309c21b2244d65c5eef97f 370 Gene3D G3DSA:3.40.640.10 46 273 2.7E-80 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_11610 ca67e7ce89309c21b2244d65c5eef97f 370 Pfam PF00155 Aminotransferase class I and II 35 366 9.4E-37 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_11610 ca67e7ce89309c21b2244d65c5eef97f 370 SUPERFAMILY SSF53383 11 368 6.19E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_11610 ca67e7ce89309c21b2244d65c5eef97f 370 TIGRFAM TIGR03539 DapC_actino: succinyldiaminopimelate transaminase 12 366 1.6E-174 T 14-10-2018 IPR019880 4-dedimethylamino-4-oxo-anhydrotetracycline transaminase OxyQ PACID_11610 ca67e7ce89309c21b2244d65c5eef97f 370 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 224 237 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PACID_11610 ca67e7ce89309c21b2244d65c5eef97f 370 Gene3D G3DSA:3.90.1150.10 19 360 2.7E-80 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_25820 a1287809e5b9e15eb47b94d3f6ff089b 634 Pfam PF10081 Alpha/beta-hydrolase family 330 620 1.1E-111 T 14-10-2018 IPR027787 Alpha/beta-hydrolase, catalytic domain PACID_25820 a1287809e5b9e15eb47b94d3f6ff089b 634 Pfam PF15420 Alpha/beta-hydrolase family N-terminus 101 313 4.6E-51 T 14-10-2018 IPR027788 Alpha/beta-hydrolase, N-terminal domain PACID_05830 0238b1ce0b6d0e27b2416e6c98fc8a79 364 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 119 267 2.3E-39 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain PACID_05830 0238b1ce0b6d0e27b2416e6c98fc8a79 364 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 120 267 2.1E-44 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain PACID_05830 0238b1ce0b6d0e27b2416e6c98fc8a79 364 Gene3D G3DSA:1.10.260.150 92 362 1.5E-72 T 14-10-2018 PACID_06450 45e54da3397c97d9e58a2cc51b970ddd 445 Gene3D G3DSA:1.20.1250.20 241 424 1.2E-17 T 14-10-2018 PACID_06450 45e54da3397c97d9e58a2cc51b970ddd 445 SUPERFAMILY SSF103473 20 420 5.75E-45 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_06450 45e54da3397c97d9e58a2cc51b970ddd 445 Gene3D G3DSA:1.20.1250.20 16 212 4.1E-20 T 14-10-2018 PACID_06450 45e54da3397c97d9e58a2cc51b970ddd 445 Pfam PF07690 Major Facilitator Superfamily 31 206 4.4E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_06450 45e54da3397c97d9e58a2cc51b970ddd 445 Pfam PF07690 Major Facilitator Superfamily 247 429 3.2E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_28650 3fabef907f0a7196442be9e879a85496 155 SUPERFAMILY SSF54909 68 138 5.23E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_28650 3fabef907f0a7196442be9e879a85496 155 SMART SM00344 7 113 3.5E-33 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 PACID_28650 3fabef907f0a7196442be9e879a85496 155 Pfam PF01037 Lrp/AsnC ligand binding domain 73 138 1.7E-9 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PACID_28650 3fabef907f0a7196442be9e879a85496 155 Pfam PF13404 AsnC-type helix-turn-helix domain 7 48 3.7E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_28650 3fabef907f0a7196442be9e879a85496 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 34 53 4.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_28650 3fabef907f0a7196442be9e879a85496 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 23 34 4.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_28650 3fabef907f0a7196442be9e879a85496 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 7 23 4.0E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 PACID_28650 3fabef907f0a7196442be9e879a85496 155 SUPERFAMILY SSF46785 7 66 5.27E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_28650 3fabef907f0a7196442be9e879a85496 155 Gene3D G3DSA:3.30.70.920 58 145 2.1E-18 T 14-10-2018 PACID_28650 3fabef907f0a7196442be9e879a85496 155 Gene3D G3DSA:1.10.10.10 8 57 2.8E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_09440 6882a06df4ff25b196ade19ca2fb245f 98 Pfam PF09723 Zinc ribbon domain 1 40 7.0E-17 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PACID_09440 6882a06df4ff25b196ade19ca2fb245f 98 SMART SM00834 1 41 1.6E-18 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PACID_09440 6882a06df4ff25b196ade19ca2fb245f 98 TIGRFAM TIGR02605 CxxC_CxxC_SSSS: putative regulatory protein, FmdB family 1 51 1.7E-21 T 14-10-2018 IPR013429 Putative regulatory protein, FmdB, Zinc ribbon domain PACID_08150 780474eb570dd844f309f88f1e074389 352 Gene3D G3DSA:3.40.50.720 2 186 3.9E-41 T 14-10-2018 PACID_08150 780474eb570dd844f309f88f1e074389 352 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 166 2.1E-19 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_08150 780474eb570dd844f309f88f1e074389 352 SUPERFAMILY SSF48179 187 347 7.65E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_08150 780474eb570dd844f309f88f1e074389 352 PIRSF PIRSF000114 1 348 4.8E-50 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_08150 780474eb570dd844f309f88f1e074389 352 Gene3D G3DSA:1.10.1040.10 187 345 1.5E-26 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_08150 780474eb570dd844f309f88f1e074389 352 SUPERFAMILY SSF51735 3 186 1.77E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_08150 780474eb570dd844f309f88f1e074389 352 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 187 339 1.6E-22 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_08150 780474eb570dd844f309f88f1e074389 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 180 204 2.5E-12 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_08150 780474eb570dd844f309f88f1e074389 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 2.5E-12 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_08150 780474eb570dd844f309f88f1e074389 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 140 160 2.5E-12 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_08150 780474eb570dd844f309f88f1e074389 352 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 255 272 2.5E-12 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 Gene3D G3DSA:2.60.40.10 636 748 5.5E-21 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 Pfam PF14310 Fibronectin type III-like domain 670 739 8.7E-15 T 14-10-2018 IPR026891 Fibronectin type III-like domain PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 45 332 3.4E-63 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 Gene3D G3DSA:3.20.20.300 3 350 3.0E-110 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 PRINTS PR00133 Glycosyl hydrolase family 3 signature 252 270 2.1E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 PRINTS PR00133 Glycosyl hydrolase family 3 signature 99 118 2.1E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 PRINTS PR00133 Glycosyl hydrolase family 3 signature 145 161 2.1E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 PRINTS PR00133 Glycosyl hydrolase family 3 signature 75 91 2.1E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 PRINTS PR00133 Glycosyl hydrolase family 3 signature 182 198 2.1E-24 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 Gene3D G3DSA:3.40.50.1700 356 635 3.0E-55 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 SUPERFAMILY SSF52279 371 636 3.27E-39 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 SMART SM01217 670 739 4.8E-21 T 14-10-2018 IPR026891 Fibronectin type III-like domain PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 SUPERFAMILY SSF51445 6 370 5.05E-106 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31860 06be5ead10c349edff13b7b5ad742e35 755 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 371 631 1.3E-37 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 PACID_12400 963c7974b03c32ff1f8d4f3930367b88 373 Gene3D G3DSA:3.90.1720.10 184 369 1.5E-51 T 14-10-2018 PACID_12400 963c7974b03c32ff1f8d4f3930367b88 373 Pfam PF00877 NlpC/P60 family 273 363 4.6E-25 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain PACID_12400 963c7974b03c32ff1f8d4f3930367b88 373 SUPERFAMILY SSF54001 257 364 3.09E-39 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PACID_25040 93f51abfae8ef985b4522cc18bf2fe28 232 Pfam PF00814 Glycoprotease family 41 147 7.4E-24 T 14-10-2018 IPR000905 Gcp-like domain PACID_25040 93f51abfae8ef985b4522cc18bf2fe28 232 SUPERFAMILY SSF53067 123 164 2.33E-5 T 14-10-2018 PACID_25040 93f51abfae8ef985b4522cc18bf2fe28 232 Gene3D G3DSA:3.30.420.40 4 125 3.7E-26 T 14-10-2018 PACID_25040 93f51abfae8ef985b4522cc18bf2fe28 232 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 14 205 7.5E-40 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 PACID_25040 93f51abfae8ef985b4522cc18bf2fe28 232 SUPERFAMILY SSF53067 13 110 4.75E-19 T 14-10-2018 PACID_06840 878b2663b27e9f78073bba3935fdb106 261 SMART SM00382 36 234 2.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_06840 878b2663b27e9f78073bba3935fdb106 261 Pfam PF00005 ABC transporter 26 177 8.2E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_06840 878b2663b27e9f78073bba3935fdb106 261 SUPERFAMILY SSF52540 9 247 3.09E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06840 878b2663b27e9f78073bba3935fdb106 261 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_06840 878b2663b27e9f78073bba3935fdb106 261 Gene3D G3DSA:3.40.50.300 11 257 3.3E-57 T 14-10-2018 PACID_16310 8b697476975d42d3224713638a8755e7 410 Pfam PF01938 TRAM domain 15 50 1.2E-4 T 14-10-2018 IPR002792 TRAM domain PACID_16310 8b697476975d42d3224713638a8755e7 410 SUPERFAMILY SSF50249 11 66 1.31E-9 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_16310 8b697476975d42d3224713638a8755e7 410 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 380 390 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site PACID_16310 8b697476975d42d3224713638a8755e7 410 Gene3D G3DSA:3.40.50.150 77 136 4.0E-6 T 14-10-2018 PACID_16310 8b697476975d42d3224713638a8755e7 410 Gene3D G3DSA:2.40.50.140 2 76 2.9E-18 T 14-10-2018 PACID_16310 8b697476975d42d3224713638a8755e7 410 Gene3D G3DSA:3.40.50.150 216 396 1.7E-47 T 14-10-2018 PACID_16310 8b697476975d42d3224713638a8755e7 410 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 323 396 9.7E-6 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 PACID_16310 8b697476975d42d3224713638a8755e7 410 SUPERFAMILY SSF53335 70 395 4.93E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_10830 a1732a770b4f4ff7236fe20fee69ea64 142 Pfam PF13508 Acetyltransferase (GNAT) domain 45 123 1.7E-10 T 14-10-2018 IPR000182 GNAT domain PACID_10830 a1732a770b4f4ff7236fe20fee69ea64 142 Gene3D G3DSA:3.40.630.30 7 128 2.4E-28 T 14-10-2018 PACID_10830 a1732a770b4f4ff7236fe20fee69ea64 142 SUPERFAMILY SSF55729 14 126 1.9E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_29430 419cd6cd2e0291d69b32263c875629dc 550 Pfam PF13245 AAA domain 224 368 5.6E-6 T 14-10-2018 PACID_29430 419cd6cd2e0291d69b32263c875629dc 550 Gene3D G3DSA:3.40.50.300 422 541 1.9E-9 T 14-10-2018 PACID_29430 419cd6cd2e0291d69b32263c875629dc 550 Gene3D G3DSA:3.40.50.300 196 376 1.3E-17 T 14-10-2018 PACID_29430 419cd6cd2e0291d69b32263c875629dc 550 Pfam PF08378 Nuclease-related domain 16 123 1.0E-10 T 14-10-2018 IPR011528 Nuclease-related domain, NERD PACID_29430 419cd6cd2e0291d69b32263c875629dc 550 SUPERFAMILY SSF52540 204 532 3.24E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06760 276af86b1abccef86f14e2826f95af9d 258 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 6 99 1.0E-12 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PACID_06760 276af86b1abccef86f14e2826f95af9d 258 SUPERFAMILY SSF48179 155 249 1.11E-5 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_06760 276af86b1abccef86f14e2826f95af9d 258 Gene3D G3DSA:3.40.50.720 5 161 5.6E-29 T 14-10-2018 PACID_06760 276af86b1abccef86f14e2826f95af9d 258 PIRSF PIRSF000193 5 258 3.4E-36 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PACID_06760 276af86b1abccef86f14e2826f95af9d 258 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 156 250 2.9E-6 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PACID_06760 276af86b1abccef86f14e2826f95af9d 258 SUPERFAMILY SSF51735 6 144 1.64E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_09960 f6c6a8eb74420cd51ec13fb256762348 200 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 4 192 29.746 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PACID_09960 f6c6a8eb74420cd51ec13fb256762348 200 Pfam PF01195 Peptidyl-tRNA hydrolase 6 199 2.6E-51 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PACID_09960 f6c6a8eb74420cd51ec13fb256762348 200 SUPERFAMILY SSF53178 4 199 1.18E-56 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 PACID_09960 f6c6a8eb74420cd51ec13fb256762348 200 Gene3D G3DSA:3.40.50.1470 1 200 2.5E-61 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 PACID_09960 f6c6a8eb74420cd51ec13fb256762348 200 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 6 200 1.7E-46 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 PACID_09960 f6c6a8eb74420cd51ec13fb256762348 200 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 121 131 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 PACID_16940 4273b0a929722077a50225a725426bca 109 Gene3D G3DSA:2.20.28.270 1 80 6.5E-33 T 14-10-2018 IPR038638 RbpA superfamily PACID_16940 4273b0a929722077a50225a725426bca 109 Pfam PF13397 RNA polymerase-binding protein 4 107 3.9E-41 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 PACID_16940 4273b0a929722077a50225a725426bca 109 Hamap MF_01483 RNA polymerase-binding protein RbpA [rbpA]. 16 109 24.058 T 14-10-2018 IPR025182 RNA polymerase-binding protein RbpA GO:0001000|GO:0045893 PACID_22960 2104580108f655c80d1ca6821bb0fbdd 443 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 52 95 4.5E-7 T 14-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PACID_22960 2104580108f655c80d1ca6821bb0fbdd 443 Pfam PF01610 Transposase 171 426 5.0E-65 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PACID_31360 2ae7b1cae0ebd49d24d8b76268ef9d14 217 Gene3D G3DSA:1.10.3720.10 4 214 3.3E-56 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31360 2ae7b1cae0ebd49d24d8b76268ef9d14 217 SUPERFAMILY SSF161098 12 205 9.68E-45 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31360 2ae7b1cae0ebd49d24d8b76268ef9d14 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 108 2.5E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PACID_31360 2ae7b1cae0ebd49d24d8b76268ef9d14 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 1.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_31360 2ae7b1cae0ebd49d24d8b76268ef9d14 217 TIGRFAM TIGR03003 ectoine_ehuD: ectoine/hydroxyectoine ABC transporter, permease protein EhuD 2 213 1.9E-79 T 14-10-2018 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD PACID_23570 dc05b9b9cca7617ee99faf06a4018abb 487 Pfam PF00324 Amino acid permease 36 474 6.9E-98 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PACID_23570 dc05b9b9cca7617ee99faf06a4018abb 487 Gene3D G3DSA:1.20.1740.10 27 484 4.1E-62 T 14-10-2018 PACID_23570 dc05b9b9cca7617ee99faf06a4018abb 487 ProSitePatterns PS00218 Amino acid permeases signature. 61 91 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PACID_23570 dc05b9b9cca7617ee99faf06a4018abb 487 PIRSF PIRSF006060 16 484 3.9E-76 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_22490 96e5904e86d83c5e3c7447f247b825ae 112 SUPERFAMILY SSF50022 2 109 2.23E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PACID_22490 96e5904e86d83c5e3c7447f247b825ae 112 Pfam PF00355 Rieske [2Fe-2S] domain 4 91 9.0E-15 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PACID_22490 96e5904e86d83c5e3c7447f247b825ae 112 Gene3D G3DSA:2.102.10.10 1 108 1.4E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PACID_17630 c8b97397bbef7d606ea6ec7ebba33e5b 89 Gene3D G3DSA:3.40.1620.10 3 42 5.7E-6 T 14-10-2018 PACID_17630 c8b97397bbef7d606ea6ec7ebba33e5b 89 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 53 9.5E-9 T 14-10-2018 PACID_17630 c8b97397bbef7d606ea6ec7ebba33e5b 89 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 68 3.3E-8 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PACID_17630 c8b97397bbef7d606ea6ec7ebba33e5b 89 SUPERFAMILY SSF143120 7 50 9.94E-8 T 14-10-2018 IPR036165 YefM-like superfamily PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 57 149 4.4E-24 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 24 218 2.9E-18 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 250 322 7.0E-33 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 Gene3D G3DSA:2.170.120.12 48 168 4.8E-81 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 Gene3D G3DSA:1.10.150.20 219 334 1.4E-31 T 14-10-2018 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 243 303 3.9E-28 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 311 34.469 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 Gene3D G3DSA:3.30.1360.10 13 217 4.8E-81 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 SMART SM00662 18 225 4.2E-85 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 SUPERFAMILY SSF56553 48 169 8.11E-40 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 SUPERFAMILY SSF55257 9 221 1.37E-25 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 19 310 1.4E-113 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25330 3cb36cef30c52bc6cac9f7613775fe88 341 SUPERFAMILY SSF47789 245 317 8.37E-26 T 14-10-2018 PACID_02500 8e43e1845ba93b9a1d455498ba928598 365 Gene3D G3DSA:1.20.1050.10 181 290 3.4E-28 T 14-10-2018 PACID_02500 8e43e1845ba93b9a1d455498ba928598 365 Gene3D G3DSA:3.40.30.130 19 180 4.5E-35 T 14-10-2018 PACID_02500 8e43e1845ba93b9a1d455498ba928598 365 SUPERFAMILY SSF47616 173 293 7.53E-16 T 14-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily PACID_31630 1cffc4ec1110ef4969e7b0151737b79a 275 Gene3D G3DSA:3.20.20.70 2 267 3.8E-57 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_31630 1cffc4ec1110ef4969e7b0151737b79a 275 Pfam PF01791 DeoC/LacD family aldolase 22 244 8.6E-21 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_31630 1cffc4ec1110ef4969e7b0151737b79a 275 SMART SM01133 20 245 1.8E-6 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_31630 1cffc4ec1110ef4969e7b0151737b79a 275 PIRSF PIRSF038992 1 273 9.4E-52 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_31630 1cffc4ec1110ef4969e7b0151737b79a 275 SUPERFAMILY SSF51569 4 260 2.23E-42 T 14-10-2018 PACID_13650 9b9261d569b670635ebbb9a3d64fa322 181 SUPERFAMILY SSF55811 6 111 8.92E-9 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_13650 9b9261d569b670635ebbb9a3d64fa322 181 Gene3D G3DSA:3.90.79.10 1 105 8.8E-12 T 14-10-2018 PACID_23770 a4d87192095bc2717099c6c91dbd271b 199 Pfam PF12277 Protein of unknown function (DUF3618) 13 59 2.6E-13 T 14-10-2018 IPR022062 Protein of unknown function DUF3618 PACID_21390 06986285578accfcdef398faf1d18a26 526 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 444 31.832 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 PACID_21390 06986285578accfcdef398faf1d18a26 526 Gene3D G3DSA:1.20.120.140 5 308 2.0E-116 T 14-10-2018 PACID_21390 06986285578accfcdef398faf1d18a26 526 Pfam PF00448 SRP54-type protein, GTPase domain 100 297 4.9E-69 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21390 06986285578accfcdef398faf1d18a26 526 Gene3D G3DSA:1.10.260.30 331 458 4.2E-35 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PACID_21390 06986285578accfcdef398faf1d18a26 526 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 7.9E-168 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 PACID_21390 06986285578accfcdef398faf1d18a26 526 SMART SM00382 99 303 5.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_21390 06986285578accfcdef398faf1d18a26 526 SUPERFAMILY SSF47446 331 432 4.41E-31 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PACID_21390 06986285578accfcdef398faf1d18a26 526 SMART SM00962 100 298 5.8E-106 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21390 06986285578accfcdef398faf1d18a26 526 Gene3D G3DSA:3.40.50.300 90 287 2.0E-116 T 14-10-2018 PACID_21390 06986285578accfcdef398faf1d18a26 526 SUPERFAMILY SSF52540 42 358 2.06E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_21390 06986285578accfcdef398faf1d18a26 526 SMART SM00963 1 86 3.1E-31 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21390 06986285578accfcdef398faf1d18a26 526 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 4.2E-20 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21390 06986285578accfcdef398faf1d18a26 526 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 271 284 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 PACID_21390 06986285578accfcdef398faf1d18a26 526 Pfam PF02978 Signal peptide binding domain 331 428 5.9E-28 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 SUPERFAMILY SSF51230 4 85 2.49E-26 T 14-10-2018 IPR011053 Single hybrid motif PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 261 493 5.5E-69 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 Gene3D G3DSA:3.30.559.10 249 493 1.4E-67 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 Pfam PF00364 Biotin-requiring enzyme 5 75 2.4E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 Gene3D G3DSA:4.10.320.10 179 220 4.9E-16 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 SUPERFAMILY SSF52777 258 494 8.9E-65 T 14-10-2018 PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 SUPERFAMILY SSF47005 175 219 1.28E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 Pfam PF02817 e3 binding domain 181 215 3.0E-13 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 Gene3D G3DSA:2.40.50.100 4 79 2.0E-24 T 14-10-2018 PACID_31100 9353aac0a344b058fd53e92683b9bb8b 495 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 PACID_21070 657b386939bc93383458fbc088aeec23 352 Gene3D G3DSA:1.10.150.130 78 188 1.6E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal PACID_21070 657b386939bc93383458fbc088aeec23 352 SUPERFAMILY SSF56349 84 284 5.59E-24 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PACID_21070 657b386939bc93383458fbc088aeec23 352 Pfam PF00589 Phage integrase family 208 256 2.7E-5 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PACID_21070 657b386939bc93383458fbc088aeec23 352 Gene3D G3DSA:1.10.443.10 189 344 1.1E-15 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PACID_07710 2be61a506af1da6c056732604f41f0a9 424 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_07710 2be61a506af1da6c056732604f41f0a9 424 SUPERFAMILY SSF54631 275 391 4.78E-8 T 14-10-2018 PACID_07710 2be61a506af1da6c056732604f41f0a9 424 Gene3D G3DSA:3.40.50.300 24 297 4.4E-74 T 14-10-2018 PACID_07710 2be61a506af1da6c056732604f41f0a9 424 Pfam PF00005 ABC transporter 42 187 2.6E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_07710 2be61a506af1da6c056732604f41f0a9 424 SUPERFAMILY SSF52540 24 263 1.18E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07710 2be61a506af1da6c056732604f41f0a9 424 SMART SM00382 50 246 3.4E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_12420 37ab27177558e7d2ea36cd9d3afd7db5 256 Pfam PF01553 Acyltransferase 23 152 3.1E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PACID_12420 37ab27177558e7d2ea36cd9d3afd7db5 256 SUPERFAMILY SSF69593 2 217 1.06E-51 T 14-10-2018 PACID_12420 37ab27177558e7d2ea36cd9d3afd7db5 256 SMART SM00563 35 155 2.2E-34 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 PIRSF PIRSF000116 1 209 4.1E-42 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 PIRSF PIRSF000116 204 330 1.0E-11 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 Gene3D G3DSA:1.10.3730.40 183 336 2.8E-68 T 14-10-2018 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 SUPERFAMILY SSF51735 3 183 7.62E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 329 44.685 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 184 327 1.5E-65 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 178 2.7E-75 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 Gene3D G3DSA:3.40.50.720 1 182 4.5E-78 T 14-10-2018 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 1.1E-130 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 PACID_20640 7d2b3c123cee71488baa3bf49d2bacd9 342 SUPERFAMILY SSF48179 184 330 9.35E-68 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_25000 90f93a081c576cb7d907a8089a0e14d3 363 SUPERFAMILY SSF102114 56 325 4.05E-39 T 14-10-2018 PACID_25000 90f93a081c576cb7d907a8089a0e14d3 363 TIGRFAM TIGR04337 AmmeMemoSam_rS: AmmeMemoRadiSam system radical SAM enzyme 15 363 5.9E-185 T 14-10-2018 IPR027596 AmmeMemoRadiSam system radical SAM enzyme PACID_25000 90f93a081c576cb7d907a8089a0e14d3 363 PIRSF PIRSF004869 2 323 4.5E-91 T 14-10-2018 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted PACID_25000 90f93a081c576cb7d907a8089a0e14d3 363 Pfam PF13353 4Fe-4S single cluster domain 81 178 5.3E-5 T 14-10-2018 PACID_25000 90f93a081c576cb7d907a8089a0e14d3 363 Gene3D G3DSA:3.20.20.70 76 295 2.2E-29 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_25000 90f93a081c576cb7d907a8089a0e14d3 363 Pfam PF04055 Radical SAM superfamily 90 243 1.5E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_12250 f764cc65567230d0aa9effe0312388fa 116 SUPERFAMILY SSF46767 4 68 4.19E-13 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PACID_12250 f764cc65567230d0aa9effe0312388fa 116 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 8 65 3.0E-14 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PACID_12250 f764cc65567230d0aa9effe0312388fa 116 Gene3D G3DSA:1.10.10.10 4 98 5.5E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_05510 11702d462f2adb6b1cd38428edf6d79e 288 Pfam PF11392 Protein of unknown function (DUF2877) 154 264 6.0E-25 T 14-10-2018 IPR021530 Protein of unknown function DUF2877 PACID_11300 13a12b66c6ca0b37f4be8592110888ed 312 SUPERFAMILY SSF53850 62 299 1.29E-48 T 14-10-2018 PACID_11300 13a12b66c6ca0b37f4be8592110888ed 312 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 73 297 4.2E-44 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_11300 13a12b66c6ca0b37f4be8592110888ed 312 Gene3D G3DSA:3.40.190.10 158 257 9.4E-51 T 14-10-2018 PACID_11300 13a12b66c6ca0b37f4be8592110888ed 312 Gene3D G3DSA:3.40.190.10 69 288 9.4E-51 T 14-10-2018 PACID_11300 13a12b66c6ca0b37f4be8592110888ed 312 SMART SM00062 72 299 4.6E-34 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_22350 89c21f72816eee3440fcf513edecafce 279 SUPERFAMILY SSF53335 62 203 1.37E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_22350 89c21f72816eee3440fcf513edecafce 279 Pfam PF13649 Methyltransferase domain 97 181 1.3E-9 T 14-10-2018 PACID_22350 89c21f72816eee3440fcf513edecafce 279 PIRSF PIRSF018249 2 276 1.2E-70 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 PACID_22350 89c21f72816eee3440fcf513edecafce 279 Gene3D G3DSA:3.40.50.150 12 275 4.3E-54 T 14-10-2018 PACID_27050 e061f5db75c5aa26de592db0b50bb411 328 Pfam PF02653 Branched-chain amino acid transport system / permease component 18 281 1.5E-47 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_22620 51fd296cf1020db7527cc941491a3dda 833 Hamap MF_01129 Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 22 742 21.097 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PACID_22620 51fd296cf1020db7527cc941491a3dda 833 Pfam PF03030 Inorganic H+ pyrophosphatase 34 736 3.7E-184 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PACID_22620 51fd296cf1020db7527cc941491a3dda 833 PIRSF PIRSF001265 19 751 7.7E-175 T 14-10-2018 IPR004131 Pyrophosphate-energised proton pump GO:0004427|GO:0009678|GO:0016020|GO:1902600 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 PACID_03190 554404fb73020a9078f23248d15af1f5 95 SUPERFAMILY SSF47598 9 79 6.45E-18 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PACID_03190 554404fb73020a9078f23248d15af1f5 95 Pfam PF08681 Protein of unknown function (DUF1778) 12 79 2.5E-18 T 14-10-2018 IPR014795 Vibrio phage ICP1, Orf50 PACID_03190 554404fb73020a9078f23248d15af1f5 95 Gene3D G3DSA:1.20.5.780 6 87 3.1E-15 T 14-10-2018 PACID_31330 2e575c653ad9cd3db12ebfa186574865 269 PIRSF PIRSF015736 2 239 5.1E-56 T 14-10-2018 IPR026286 Maleate isomerase/Arylmalonate decarboxylase PACID_31330 2e575c653ad9cd3db12ebfa186574865 269 Gene3D G3DSA:3.40.50.12500 3 236 5.0E-56 T 14-10-2018 PACID_28430 4c5989f982a1202bf25e12bff575cab0 198 Gene3D G3DSA:1.20.5.340 43 150 4.9E-6 T 14-10-2018 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 SMART SM00861 902 1096 3.2E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 SUPERFAMILY SSF52518 465 842 1.31E-78 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 17 46 2.7E-7 T 14-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 128 362 8.8E-48 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 390 1247 1.2E-278 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Pfam PF00676 Dehydrogenase E1 component 524 838 1.6E-52 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Gene3D G3DSA:1.10.287.1150 394 477 6.3E-23 T 14-10-2018 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Pfam PF02779 Transketolase, pyrimidine binding domain 902 1096 7.3E-52 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Gene3D G3DSA:3.40.50.12470 861 1118 5.3E-139 T 14-10-2018 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Gene3D G3DSA:3.40.50.970 478 840 6.6E-141 T 14-10-2018 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 SUPERFAMILY SSF52777 118 362 1.69E-53 T 14-10-2018 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 PIRSF PIRSF000157 3 1250 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 SUPERFAMILY SSF52518 899 1102 1.47E-40 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Gene3D G3DSA:3.30.559.10 113 371 1.6E-51 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 1101 1248 1.9E-38 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 PACID_19760 1622e284107cbee6e09e56a3574c135e 1251 Gene3D G3DSA:3.40.50.11610 1039 1246 5.3E-139 T 14-10-2018 PACID_02720 1be4164f1466f0463d08e4d51cabcf04 227 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 32 181 1.4E-30 T 14-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 PACID_02720 1be4164f1466f0463d08e4d51cabcf04 227 Pfam PF02613 Nitrate reductase delta subunit 58 175 1.8E-13 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone PACID_02720 1be4164f1466f0463d08e4d51cabcf04 227 SUPERFAMILY SSF89155 23 186 2.22E-27 T 14-10-2018 IPR036411 TorD-like superfamily PACID_02720 1be4164f1466f0463d08e4d51cabcf04 227 Gene3D G3DSA:1.10.3480.10 14 184 1.4E-6 T 14-10-2018 PACID_07310 eef5215cc6a03061598ae256a9e34d46 495 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 465 2.1E-125 T 14-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 PACID_07310 eef5215cc6a03061598ae256a9e34d46 495 SUPERFAMILY SSF103473 19 454 1.26E-27 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_07310 eef5215cc6a03061598ae256a9e34d46 495 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 66 91 - T 14-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 PACID_07310 eef5215cc6a03061598ae256a9e34d46 495 Pfam PF13347 MFS/sugar transport protein 10 446 1.6E-82 T 14-10-2018 PACID_07310 eef5215cc6a03061598ae256a9e34d46 495 Gene3D G3DSA:1.20.1250.20 8 443 2.8E-16 T 14-10-2018 PACID_26430 296a6043c5b2c5b3eb7d4d3fb75ca1a3 413 Pfam PF00425 chorismate binding enzyme 153 403 2.8E-31 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PACID_26430 296a6043c5b2c5b3eb7d4d3fb75ca1a3 413 SUPERFAMILY SSF56322 37 411 1.7E-39 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PACID_26430 296a6043c5b2c5b3eb7d4d3fb75ca1a3 413 Gene3D G3DSA:3.60.120.10 27 413 4.1E-36 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PACID_24460 eea7cf77cdbe2adfbcb3181d88a7bec3 133 Gene3D G3DSA:3.40.140.10 1 132 8.3E-45 T 14-10-2018 PACID_24460 eea7cf77cdbe2adfbcb3181d88a7bec3 133 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 9 104 5.2E-11 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain PACID_24460 eea7cf77cdbe2adfbcb3181d88a7bec3 133 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 97 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PACID_24460 eea7cf77cdbe2adfbcb3181d88a7bec3 133 SUPERFAMILY SSF53927 6 129 5.35E-37 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 3.6E-26 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 Gene3D G3DSA:2.40.50.530 1 63 1.7E-25 T 14-10-2018 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 PRINTS PR00064 Ribosomal protein L35 signature 36 54 5.5E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.5E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 PRINTS PR00064 Ribosomal protein L35 signature 21 35 5.5E-17 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.028 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 SUPERFAMILY SSF143034 2 62 1.09E-21 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_10180 d3c1f2f4122320e97efe84f3ccfe0cba 68 Pfam PF01632 Ribosomal protein L35 2 62 3.9E-25 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_09060 49d259ce95190996954554ce0ce59a37 543 SUPERFAMILY SSF48592 6 518 5.0E-73 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily PACID_09060 49d259ce95190996954554ce0ce59a37 543 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_09060 49d259ce95190996954554ce0ce59a37 543 Gene3D G3DSA:1.10.560.10 7 518 1.3E-220 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily PACID_09060 49d259ce95190996954554ce0ce59a37 543 SUPERFAMILY SSF52029 185 374 1.21E-80 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily PACID_09060 49d259ce95190996954554ce0ce59a37 543 Gene3D G3DSA:3.50.7.10 190 370 1.3E-220 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily PACID_09060 49d259ce95190996954554ce0ce59a37 543 PRINTS PR00298 60kDa chaperonin signature 396 417 1.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_09060 49d259ce95190996954554ce0ce59a37 543 PRINTS PR00298 60kDa chaperonin signature 348 373 1.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_09060 49d259ce95190996954554ce0ce59a37 543 PRINTS PR00298 60kDa chaperonin signature 266 289 1.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_09060 49d259ce95190996954554ce0ce59a37 543 PRINTS PR00298 60kDa chaperonin signature 82 109 1.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_09060 49d259ce95190996954554ce0ce59a37 543 PRINTS PR00298 60kDa chaperonin signature 26 52 1.5E-70 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_09060 49d259ce95190996954554ce0ce59a37 543 Gene3D G3DSA:3.30.260.10 135 408 1.3E-220 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PACID_09060 49d259ce95190996954554ce0ce59a37 543 SUPERFAMILY SSF54849 137 202 1.9E-25 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PACID_09060 49d259ce95190996954554ce0ce59a37 543 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 1.6E-246 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_09060 49d259ce95190996954554ce0ce59a37 543 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 521 2.5E-91 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PACID_09060 49d259ce95190996954554ce0ce59a37 543 Hamap MF_00600 60 kDa chaperonin [groL]. 1 542 40.981 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_02310 835fc0f1554b016035c243da75dbf63d 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 48 257 7.2E-35 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_02310 835fc0f1554b016035c243da75dbf63d 259 Gene3D G3DSA:1.10.3720.10 26 252 3.6E-17 T 14-10-2018 IPR035906 MetI-like superfamily PACID_02310 835fc0f1554b016035c243da75dbf63d 259 SUPERFAMILY SSF161098 28 240 8.24E-15 T 14-10-2018 IPR035906 MetI-like superfamily PACID_03720 f40e6b159d586e57d061227f8309dd3e 500 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 113 499 4.4E-147 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 PACID_03720 f40e6b159d586e57d061227f8309dd3e 500 Pfam PF08666 SAF domain 11 86 1.4E-10 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PACID_03720 f40e6b159d586e57d061227f8309dd3e 500 Gene3D G3DSA:3.90.1210.30 3 90 3.6E-25 T 14-10-2018 PACID_03720 f40e6b159d586e57d061227f8309dd3e 500 SMART SM00858 11 87 1.9E-12 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PACID_06920 b6f5615a2b6d375b10de1caf2c07bc6a 299 SUPERFAMILY SSF161098 63 288 4.71E-52 T 14-10-2018 IPR035906 MetI-like superfamily PACID_06920 b6f5615a2b6d375b10de1caf2c07bc6a 299 Gene3D G3DSA:1.10.3720.10 59 297 6.9E-58 T 14-10-2018 IPR035906 MetI-like superfamily PACID_06920 b6f5615a2b6d375b10de1caf2c07bc6a 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 289 2.7E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 SMART SM00490 1008 1112 8.1E-15 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 Pfam PF00271 Helicase conserved C-terminal domain 1043 1111 1.5E-10 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 Pfam PF00270 DEAD/DEAH box helicase 100 255 2.1E-14 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 SUPERFAMILY SSF52540 78 288 2.6E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 SMART SM00487 75 311 6.6E-12 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 Gene3D G3DSA:3.40.50.300 1013 1123 3.1E-16 T 14-10-2018 PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 Gene3D G3DSA:3.40.50.300 74 303 3.1E-32 T 14-10-2018 PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 Pfam PF09369 Domain of unknown function (DUF1998) 1593 1685 1.8E-8 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative PACID_03270 2353e06b8d1cab8e8c8b6d7b0e701a20 2151 SUPERFAMILY SSF52540 100 1115 2.22E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07850 2baff780f0c00270f6a761689b191dd4 206 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 61 83 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PACID_07850 2baff780f0c00270f6a761689b191dd4 206 Gene3D G3DSA:1.20.120.1760 1 203 1.3E-22 T 14-10-2018 PACID_07850 2baff780f0c00270f6a761689b191dd4 206 Pfam PF01066 CDP-alcohol phosphatidyltransferase 15 83 1.0E-8 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PACID_03290 a205be3e200697fcdf284134a840ecd8 557 Gene3D G3DSA:3.40.50.300 430 538 8.7E-10 T 14-10-2018 PACID_03290 a205be3e200697fcdf284134a840ecd8 557 SUPERFAMILY SSF52540 3 538 4.78E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03290 a205be3e200697fcdf284134a840ecd8 557 Gene3D G3DSA:3.40.50.300 159 282 1.4E-19 T 14-10-2018 PACID_03290 a205be3e200697fcdf284134a840ecd8 557 Gene3D G3DSA:3.40.50.300 1 153 2.7E-19 T 14-10-2018 PACID_03290 a205be3e200697fcdf284134a840ecd8 557 Pfam PF13245 AAA domain 15 241 4.4E-17 T 14-10-2018 PACID_03290 a205be3e200697fcdf284134a840ecd8 557 Pfam PF13361 UvrD-like helicase C-terminal domain 457 512 1.4E-6 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_08770 2f0b3f5ae0338339ee6e08d611798372 402 Gene3D G3DSA:3.30.565.10 278 402 2.0E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_08770 2f0b3f5ae0338339ee6e08d611798372 402 SUPERFAMILY SSF55874 291 401 2.07E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_08770 2f0b3f5ae0338339ee6e08d611798372 402 Pfam PF07730 Histidine kinase 200 266 7.4E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_11110 2139c094f96f1cce406902db985bc997 172 PIRSF PIRSF028103 1 171 2.2E-44 T 14-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 PACID_11110 2139c094f96f1cce406902db985bc997 172 SUPERFAMILY SSF55021 90 169 8.51E-10 T 14-10-2018 PACID_11110 2139c094f96f1cce406902db985bc997 172 Gene3D G3DSA:3.30.70.260 2 79 2.9E-22 T 14-10-2018 PACID_11110 2139c094f96f1cce406902db985bc997 172 Gene3D G3DSA:3.30.70.260 84 172 7.0E-20 T 14-10-2018 PACID_11110 2139c094f96f1cce406902db985bc997 172 SUPERFAMILY SSF55021 3 67 4.58E-13 T 14-10-2018 PACID_11110 2139c094f96f1cce406902db985bc997 172 Pfam PF13740 ACT domain 3 69 2.2E-16 T 14-10-2018 PACID_02180 0de3442502f71ec5d8269340de243e15 161 SUPERFAMILY SSF51230 90 159 1.01E-20 T 14-10-2018 IPR011053 Single hybrid motif PACID_02180 0de3442502f71ec5d8269340de243e15 161 Pfam PF00364 Biotin-requiring enzyme 93 156 1.1E-16 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PACID_02180 0de3442502f71ec5d8269340de243e15 161 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 115 132 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_02180 0de3442502f71ec5d8269340de243e15 161 Gene3D G3DSA:2.40.50.100 87 160 4.2E-24 T 14-10-2018 PACID_05500 09951814acdef5923db8d3b6451954d9 325 Gene3D G3DSA:3.40.1160.10 1 325 9.3E-109 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_05500 09951814acdef5923db8d3b6451954d9 325 PRINTS PR01469 Bacterial carbamate kinase signature 280 295 4.8E-25 T 14-10-2018 PACID_05500 09951814acdef5923db8d3b6451954d9 325 PRINTS PR01469 Bacterial carbamate kinase signature 70 88 4.8E-25 T 14-10-2018 PACID_05500 09951814acdef5923db8d3b6451954d9 325 PRINTS PR01469 Bacterial carbamate kinase signature 41 60 4.8E-25 T 14-10-2018 PACID_05500 09951814acdef5923db8d3b6451954d9 325 SUPERFAMILY SSF53633 1 323 7.33E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_05500 09951814acdef5923db8d3b6451954d9 325 PIRSF PIRSF000723 109 325 6.6E-67 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PACID_05500 09951814acdef5923db8d3b6451954d9 325 PIRSF PIRSF000723 1 106 3.1E-27 T 14-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 PACID_05500 09951814acdef5923db8d3b6451954d9 325 Pfam PF00696 Amino acid kinase family 1 305 2.6E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PACID_31410 8502b1ed6b8a0776ccd6e7843236fad4 166 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 29 154 2.8E-15 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like PACID_31410 8502b1ed6b8a0776ccd6e7843236fad4 166 Gene3D G3DSA:3.30.530.20 20 165 2.3E-31 T 14-10-2018 IPR023393 START-like domain superfamily PACID_31410 8502b1ed6b8a0776ccd6e7843236fad4 166 SUPERFAMILY SSF55961 19 155 6.25E-26 T 14-10-2018 PACID_03590 6d76394b7bddc8ac053a3268397cc2d4 532 TIGRFAM TIGR03417 chol_sulfatase: choline-sulfatase 2 488 6.8E-180 T 14-10-2018 IPR017785 Choline-sulfatase PACID_03590 6d76394b7bddc8ac053a3268397cc2d4 532 ProSitePatterns PS00523 Sulfatases signature 1. 50 62 - T 14-10-2018 IPR024607 Sulfatase, conserved site PACID_03590 6d76394b7bddc8ac053a3268397cc2d4 532 Pfam PF12411 Choline sulfatase enzyme C terminal 450 487 7.0E-10 T 14-10-2018 IPR025863 Choline sulfatase enzyme C-terminal domain PACID_03590 6d76394b7bddc8ac053a3268397cc2d4 532 Gene3D G3DSA:3.40.720.10 3 453 1.7E-113 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PACID_03590 6d76394b7bddc8ac053a3268397cc2d4 532 Pfam PF00884 Sulfatase 4 342 5.0E-57 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 PACID_03590 6d76394b7bddc8ac053a3268397cc2d4 532 SUPERFAMILY SSF53649 3 420 4.52E-111 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PACID_25810 be5b5d2327923e0f8117c061552f2ee5 175 SUPERFAMILY SSF109854 1 167 2.59E-24 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_25810 be5b5d2327923e0f8117c061552f2ee5 175 Gene3D G3DSA:1.20.120.450 1 170 4.8E-49 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_25810 be5b5d2327923e0f8117c061552f2ee5 175 Pfam PF04978 Protein of unknown function (DUF664) 8 168 2.6E-15 T 14-10-2018 IPR007061 Protein of unknown function DUF664 PACID_16570 b2f057d6547355688b7efc5791c0fe5e 201 Pfam PF01066 CDP-alcohol phosphatidyltransferase 13 77 1.6E-13 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PACID_16570 b2f057d6547355688b7efc5791c0fe5e 201 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 55 77 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PACID_16570 b2f057d6547355688b7efc5791c0fe5e 201 PIRSF PIRSF000847 8 194 1.4E-42 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 PACID_16570 b2f057d6547355688b7efc5791c0fe5e 201 Gene3D G3DSA:1.20.120.1760 8 187 1.2E-9 T 14-10-2018 PACID_12480 8ca6f4ea3e2f578799e619e6f9d32186 315 SUPERFAMILY SSF103481 44 139 3.14E-11 T 14-10-2018 PACID_12480 8ca6f4ea3e2f578799e619e6f9d32186 315 SUPERFAMILY SSF103481 190 289 2.35E-14 T 14-10-2018 PACID_12480 8ca6f4ea3e2f578799e619e6f9d32186 315 Pfam PF00892 EamA-like transporter family 14 134 3.9E-14 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_12480 8ca6f4ea3e2f578799e619e6f9d32186 315 Pfam PF00892 EamA-like transporter family 151 283 3.7E-17 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_07020 7b032fac0a6de57dc6266707f4c8187b 495 Pfam PF00498 FHA domain 404 484 9.3E-8 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_07020 7b032fac0a6de57dc6266707f4c8187b 495 SUPERFAMILY SSF49879 399 485 1.4E-11 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 PACID_07020 7b032fac0a6de57dc6266707f4c8187b 495 SMART SM00240 402 462 0.0012 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_07020 7b032fac0a6de57dc6266707f4c8187b 495 Gene3D G3DSA:2.60.200.20 389 492 4.1E-13 T 14-10-2018 PACID_01360 4e2d5e60a45e77edafadd09ce2dc2917 193 Pfam PF00196 Bacterial regulatory proteins, luxR family 132 185 1.1E-6 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_01360 4e2d5e60a45e77edafadd09ce2dc2917 193 SUPERFAMILY SSF52172 33 118 3.22E-8 T 14-10-2018 IPR011006 CheY-like superfamily PACID_01360 4e2d5e60a45e77edafadd09ce2dc2917 193 Gene3D G3DSA:3.40.50.2300 24 128 1.9E-5 T 14-10-2018 PACID_01360 4e2d5e60a45e77edafadd09ce2dc2917 193 SMART SM00421 130 187 2.4E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_01360 4e2d5e60a45e77edafadd09ce2dc2917 193 Gene3D G3DSA:1.10.10.10 129 193 2.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_01360 4e2d5e60a45e77edafadd09ce2dc2917 193 SUPERFAMILY SSF46894 118 193 5.44E-12 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_13920 d13bfac9d8fad3844cb9fcee1a4195ea 329 Gene3D G3DSA:3.90.226.10 8 268 3.7E-70 T 14-10-2018 PACID_13920 d13bfac9d8fad3844cb9fcee1a4195ea 329 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 16 328 51.506 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 PACID_13920 d13bfac9d8fad3844cb9fcee1a4195ea 329 Pfam PF00378 Enoyl-CoA hydratase/isomerase 51 323 3.3E-45 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 PACID_13920 d13bfac9d8fad3844cb9fcee1a4195ea 329 SUPERFAMILY SSF52096 50 326 2.26E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_13920 d13bfac9d8fad3844cb9fcee1a4195ea 329 Gene3D G3DSA:1.10.12.10 269 317 3.4E-27 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal PACID_13920 d13bfac9d8fad3844cb9fcee1a4195ea 329 TIGRFAM TIGR01929 menB: naphthoate synthase 51 324 8.9E-105 T 14-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 PACID_22460 730d9b6cd4f1de42f7e22edaba67658c 162 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 4 139 3.9E-50 T 14-10-2018 PACID_22460 730d9b6cd4f1de42f7e22edaba67658c 162 Pfam PF01592 NifU-like N terminal domain 6 127 2.2E-25 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 PACID_22460 730d9b6cd4f1de42f7e22edaba67658c 162 Gene3D G3DSA:3.90.1010.10 1 146 5.1E-48 T 14-10-2018 PACID_22460 730d9b6cd4f1de42f7e22edaba67658c 162 SUPERFAMILY SSF82649 2 141 7.33E-46 T 14-10-2018 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 289 307 - T 14-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 68 80 - T 14-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 308 6.9E-63 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 8 180 2.1E-43 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 Gene3D G3DSA:3.40.50.150 246 315 9.4E-11 T 14-10-2018 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 Gene3D G3DSA:3.40.50.150 1 196 4.6E-56 T 14-10-2018 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 SUPERFAMILY SSF53335 3 309 3.28E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 106 120 4.6E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 152 165 4.6E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PACID_00950 31ab78408b4aaa5dd4bb942b78d7be7d 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 5 21 4.6E-12 T 14-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 PACID_18560 e33f9348f10e6dcd11feb72c42d2339f 467 Gene3D G3DSA:3.40.50.2000 242 450 7.0E-157 T 14-10-2018 PACID_18560 e33f9348f10e6dcd11feb72c42d2339f 467 SUPERFAMILY SSF53756 10 465 1.51E-134 T 14-10-2018 PACID_18560 e33f9348f10e6dcd11feb72c42d2339f 467 Gene3D G3DSA:3.40.50.2000 34 461 7.0E-157 T 14-10-2018 PACID_18560 e33f9348f10e6dcd11feb72c42d2339f 467 Pfam PF00982 Glycosyltransferase family 20 10 465 1.2E-133 T 14-10-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 KEGG: 00500+2.4.1.15 PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 SUPERFAMILY SSF52518 1 182 9.2E-39 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 171 6.8E-36 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 Gene3D G3DSA:3.40.50.1220 181 333 4.9E-41 T 14-10-2018 PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 Gene3D G3DSA:3.40.50.970 1 176 2.0E-49 T 14-10-2018 PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 Gene3D G3DSA:3.40.50.970 352 575 1.3E-65 T 14-10-2018 PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 528 6.2E-39 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 194 320 9.4E-27 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 SUPERFAMILY SSF52467 185 339 7.32E-37 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PACID_21650 a2e62aa7f3019234d6d5903508ff25c0 579 SUPERFAMILY SSF52518 359 553 2.76E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_28610 0100902e2f94adb7c9bc1080810c8385 219 SUPERFAMILY SSF53300 8 143 4.45E-9 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_28610 0100902e2f94adb7c9bc1080810c8385 219 Gene3D G3DSA:3.40.50.410 9 179 7.1E-6 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_28900 0d439270a8a8a7ea0f25ea68ca25ff31 499 Pfam PF05175 Methyltransferase small domain 141 281 4.3E-14 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PACID_28900 0d439270a8a8a7ea0f25ea68ca25ff31 499 SUPERFAMILY SSF53335 145 327 3.32E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_28900 0d439270a8a8a7ea0f25ea68ca25ff31 499 Gene3D G3DSA:3.40.50.150 136 298 2.8E-29 T 14-10-2018 PACID_28900 0d439270a8a8a7ea0f25ea68ca25ff31 499 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 227 233 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PACID_28640 e5aabece7add63110e3724db45656c24 296 Pfam PF13354 Beta-lactamase enzyme family 31 247 6.6E-28 T 14-10-2018 PACID_28640 e5aabece7add63110e3724db45656c24 296 SUPERFAMILY SSF56601 13 258 6.2E-29 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_28640 e5aabece7add63110e3724db45656c24 296 Gene3D G3DSA:3.40.710.10 9 278 3.9E-39 T 14-10-2018 PACID_34130 acf38a32e5db40c04646cb132b3472cb 288 SUPERFAMILY SSF51658 9 280 1.52E-46 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_34130 acf38a32e5db40c04646cb132b3472cb 288 Gene3D G3DSA:3.20.20.150 3 285 2.3E-42 T 14-10-2018 PACID_34130 acf38a32e5db40c04646cb132b3472cb 288 Pfam PF01261 Xylose isomerase-like TIM barrel 22 242 7.6E-29 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PACID_27820 a06c170ca88b5ea1b5e3f4aa77034125 279 Gene3D G3DSA:3.40.50.300 2 258 6.4E-68 T 14-10-2018 PACID_27820 a06c170ca88b5ea1b5e3f4aa77034125 279 Pfam PF00005 ABC transporter 22 169 8.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_27820 a06c170ca88b5ea1b5e3f4aa77034125 279 SUPERFAMILY SSF52540 6 233 2.3E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27820 a06c170ca88b5ea1b5e3f4aa77034125 279 SMART SM00382 30 219 2.1E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_27820 a06c170ca88b5ea1b5e3f4aa77034125 279 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_05590 39705be83196f6b1fec45f5b69d0926e 439 SUPERFAMILY SSF51556 54 373 2.79E-99 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_05590 39705be83196f6b1fec45f5b69d0926e 439 TIGRFAM TIGR03178 allantoinase: allantoinase 12 427 8.1E-154 T 14-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 PACID_05590 39705be83196f6b1fec45f5b69d0926e 439 Pfam PF01979 Amidohydrolase family 50 423 1.0E-30 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 PACID_05590 39705be83196f6b1fec45f5b69d0926e 439 Gene3D G3DSA:3.20.20.140 53 411 1.9E-129 T 14-10-2018 PACID_05590 39705be83196f6b1fec45f5b69d0926e 439 SUPERFAMILY SSF51338 15 431 2.66E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_05590 39705be83196f6b1fec45f5b69d0926e 439 Gene3D G3DSA:2.30.40.10 13 423 1.9E-129 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 PACID_03520 8ea9a520f67a9f6e7b358dedc164c021 269 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 139 159 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site PACID_03520 8ea9a520f67a9f6e7b358dedc164c021 269 Gene3D G3DSA:3.60.110.10 1 269 1.3E-70 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PACID_03520 8ea9a520f67a9f6e7b358dedc164c021 269 Pfam PF00795 Carbon-nitrogen hydrolase 2 258 7.5E-42 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PACID_03520 8ea9a520f67a9f6e7b358dedc164c021 269 SUPERFAMILY SSF56317 1 267 1.19E-64 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PACID_15500 fa59338ed82241b4a29b0e675d4b3e1a 193 SUPERFAMILY SSF54171 113 161 5.62E-5 T 14-10-2018 IPR016177 DNA-binding domain superfamily GO:0003677 PACID_15500 fa59338ed82241b4a29b0e675d4b3e1a 193 SUPERFAMILY SSF54060 21 119 9.42E-13 T 14-10-2018 PACID_15500 fa59338ed82241b4a29b0e675d4b3e1a 193 Pfam PF00847 AP2 domain 113 158 3.1E-6 T 14-10-2018 IPR001471 AP2/ERF domain GO:0003700|GO:0006355 PACID_15500 fa59338ed82241b4a29b0e675d4b3e1a 193 Pfam PF13392 HNH endonuclease 59 103 8.7E-7 T 14-10-2018 IPR003615 HNH nuclease PACID_08220 6e29e8a301d3710e111f337120784c0e 432 Gene3D G3DSA:3.40.50.720 12 173 3.9E-10 T 14-10-2018 PACID_08220 6e29e8a301d3710e111f337120784c0e 432 SUPERFAMILY SSF51735 17 141 5.99E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_08220 6e29e8a301d3710e111f337120784c0e 432 SMART SM00858 343 408 0.0088 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PACID_29220 11011699c7ab6104ee95ee639b905d29 492 PIRSF PIRSF006060 3 472 3.9E-74 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_29220 11011699c7ab6104ee95ee639b905d29 492 Gene3D G3DSA:1.20.1740.10 21 467 4.0E-62 T 14-10-2018 PACID_29220 11011699c7ab6104ee95ee639b905d29 492 ProSitePatterns PS00218 Amino acid permeases signature. 55 86 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PACID_29220 11011699c7ab6104ee95ee639b905d29 492 Pfam PF00324 Amino acid permease 30 439 2.4E-108 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PACID_13280 fffbaf8ef8dbfc794eb5478319a5b36b 550 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 22 358 4.7E-92 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_13280 fffbaf8ef8dbfc794eb5478319a5b36b 550 SUPERFAMILY SSF51445 14 392 4.0E-95 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_13280 fffbaf8ef8dbfc794eb5478319a5b36b 550 Gene3D G3DSA:3.20.20.300 5 375 8.4E-119 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 PACID_13280 fffbaf8ef8dbfc794eb5478319a5b36b 550 Gene3D G3DSA:3.40.50.1700 381 550 7.4E-19 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PACID_13280 fffbaf8ef8dbfc794eb5478319a5b36b 550 SUPERFAMILY SSF52279 397 548 1.7E-5 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 PACID_13280 fffbaf8ef8dbfc794eb5478319a5b36b 550 PRINTS PR00133 Glycosyl hydrolase family 3 signature 123 142 8.7E-5 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_13280 fffbaf8ef8dbfc794eb5478319a5b36b 550 PRINTS PR00133 Glycosyl hydrolase family 3 signature 202 218 8.7E-5 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_13280 fffbaf8ef8dbfc794eb5478319a5b36b 550 PRINTS PR00133 Glycosyl hydrolase family 3 signature 279 297 8.7E-5 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 PACID_26230 2c3547b6920cfee4560c87d70919f2f5 292 Gene3D G3DSA:3.20.20.60 1 291 4.2E-97 T 14-10-2018 PACID_26230 2c3547b6920cfee4560c87d70919f2f5 292 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 9 223 4.2E-51 T 14-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 PACID_26230 2c3547b6920cfee4560c87d70919f2f5 292 SUPERFAMILY SSF51621 5 233 4.0E-70 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PACID_26230 2c3547b6920cfee4560c87d70919f2f5 292 PIRSF PIRSF015582 1 290 1.1E-87 T 14-10-2018 IPR011206 Citrate lyase beta subunit-like PACID_33110 7c0ae091a404dcec93c4c1ea669bac31 590 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 134 146 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PACID_33110 7c0ae091a404dcec93c4c1ea669bac31 590 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 40 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 PACID_33110 7c0ae091a404dcec93c4c1ea669bac31 590 SUPERFAMILY SSF56112 9 294 2.5E-73 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_33110 7c0ae091a404dcec93c4c1ea669bac31 590 SMART SM00220 12 290 3.2E-66 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_33110 7c0ae091a404dcec93c4c1ea669bac31 590 Gene3D G3DSA:1.10.510.10 93 293 1.5E-48 T 14-10-2018 PACID_33110 7c0ae091a404dcec93c4c1ea669bac31 590 Gene3D G3DSA:3.30.200.20 1 92 4.1E-23 T 14-10-2018 PACID_33110 7c0ae091a404dcec93c4c1ea669bac31 590 Pfam PF00069 Protein kinase domain 12 284 3.2E-52 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_19140 e8ed6a680418bfd5980b5b10f6254d83 719 Gene3D G3DSA:2.60.40.10 75 264 1.9E-51 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_19140 e8ed6a680418bfd5980b5b10f6254d83 719 Gene3D G3DSA:3.20.20.80 265 630 1.7E-161 T 14-10-2018 PACID_19140 e8ed6a680418bfd5980b5b10f6254d83 719 Gene3D G3DSA:2.60.40.1180 631 719 2.1E-22 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_19140 e8ed6a680418bfd5980b5b10f6254d83 719 Gene3D G3DSA:1.20.58.280 164 245 1.9E-51 T 14-10-2018 PACID_19140 e8ed6a680418bfd5980b5b10f6254d83 719 Pfam PF11896 Domain of unknown function (DUF3416) 74 264 1.2E-49 T 14-10-2018 IPR021828 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S GO:0004553 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 PACID_19140 e8ed6a680418bfd5980b5b10f6254d83 719 Hamap MF_02124 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase [glgE]. 72 719 43.755 T 14-10-2018 IPR026585 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase GO:0016757 KEGG: 00500+2.4.99.16|MetaCyc: PWY-7900 PACID_19140 e8ed6a680418bfd5980b5b10f6254d83 719 SUPERFAMILY SSF51445 271 627 6.41E-76 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 Gene3D G3DSA:3.90.190.20 350 491 4.1E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 Gene3D G3DSA:3.40.50.720 20 114 2.8E-16 T 14-10-2018 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 Gene3D G3DSA:3.40.1190.10 116 343 5.7E-45 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 SUPERFAMILY SSF53623 129 341 1.23E-41 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 SUPERFAMILY SSF53244 347 489 1.42E-35 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 347 416 2.3E-7 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 SUPERFAMILY SSF51984 23 116 1.7E-14 T 14-10-2018 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 26 487 6.9E-111 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 Pfam PF08245 Mur ligase middle domain 136 324 2.7E-20 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PACID_12830 9f3d828b01d4b30defb5ed87a1b25586 495 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 24 489 30.01 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_33490 c632254dcfdcae34db8403c064ef78c3 450 PIRSF PIRSF005700 13 450 1.6E-151 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 PACID_33490 c632254dcfdcae34db8403c064ef78c3 450 Pfam PF03051 Peptidase C1-like family 24 446 8.3E-160 T 14-10-2018 IPR004134 Peptidase C1B, bleomycin hydrolase GO:0004197|GO:0006508 Reactome: R-HSA-983168 PACID_33490 c632254dcfdcae34db8403c064ef78c3 450 SUPERFAMILY SSF54001 25 448 9.47E-115 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PACID_33490 c632254dcfdcae34db8403c064ef78c3 450 ProSitePatterns PS00139 Eukaryotic thiol (cysteine) proteases cysteine active site. 70 81 - T 14-10-2018 IPR000169 Cysteine peptidase, cysteine active site PACID_33490 c632254dcfdcae34db8403c064ef78c3 450 Gene3D G3DSA:3.90.70.10 59 449 1.7E-157 T 14-10-2018 PACID_05320 593473c667015a3f0cd6ad16ad2e784c 518 Gene3D G3DSA:1.25.40.10 100 377 1.2E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_02470 81bf7475cd046c04fd5e368f53a9ca6f 404 Pfam PF13635 Domain of unknown function (DUF4143) 182 346 2.7E-19 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 PACID_02470 81bf7475cd046c04fd5e368f53a9ca6f 404 SUPERFAMILY SSF52540 7 117 4.99E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_02470 81bf7475cd046c04fd5e368f53a9ca6f 404 Pfam PF13173 AAA domain 6 116 1.1E-12 T 14-10-2018 PACID_25940 ebbc9ea0b209dfab69a4cc7e7b8b57dd 192 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 1 158 24.159 T 14-10-2018 IPR022973 Ribosomal protein L10 PACID_25940 ebbc9ea0b209dfab69a4cc7e7b8b57dd 192 SUPERFAMILY SSF160369 1 168 2.35E-49 T 14-10-2018 PACID_25940 ebbc9ea0b209dfab69a4cc7e7b8b57dd 192 Pfam PF00466 Ribosomal protein L10 1 98 2.6E-24 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 PACID_25940 ebbc9ea0b209dfab69a4cc7e7b8b57dd 192 ProSitePatterns PS01109 Ribosomal protein L10 signature. 6 40 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25940 ebbc9ea0b209dfab69a4cc7e7b8b57dd 192 Gene3D G3DSA:3.30.70.1730 1 159 1.3E-38 T 14-10-2018 PACID_27720 cdb994d76dff0584204aa006ce121967 341 SMART SM00833 229 318 8.8E-9 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PACID_27720 cdb994d76dff0584204aa006ce121967 341 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 230 316 1.8E-9 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal PACID_27720 cdb994d76dff0584204aa006ce121967 341 Gene3D G3DSA:3.40.50.300 1 196 4.4E-43 T 14-10-2018 PACID_27720 cdb994d76dff0584204aa006ce121967 341 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 1 178 1.6E-35 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain PACID_27720 cdb994d76dff0584204aa006ce121967 341 SUPERFAMILY SSF52540 1 193 1.2E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27720 cdb994d76dff0584204aa006ce121967 341 SUPERFAMILY SSF90002 231 316 5.49E-10 T 14-10-2018 PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 Pfam PF07731 Multicopper oxidase 391 498 3.3E-22 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 Gene3D G3DSA:2.60.40.420 179 372 7.3E-33 T 14-10-2018 IPR008972 Cupredoxin PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 Gene3D G3DSA:2.60.40.420 46 174 6.9E-39 T 14-10-2018 IPR008972 Cupredoxin PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 SUPERFAMILY SSF49503 179 362 4.86E-33 T 14-10-2018 IPR008972 Cupredoxin PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 Pfam PF07732 Multicopper oxidase 70 175 2.2E-32 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 SUPERFAMILY SSF49503 40 196 1.88E-35 T 14-10-2018 IPR008972 Cupredoxin PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 Pfam PF00394 Multicopper oxidase 183 348 1.8E-22 T 14-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 SUPERFAMILY SSF49503 392 497 8.51E-30 T 14-10-2018 IPR008972 Cupredoxin PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 Gene3D G3DSA:2.60.40.420 377 502 1.9E-30 T 14-10-2018 IPR008972 Cupredoxin PACID_01640 22a3ee70e6b6af413b3f52c15f1b0736 503 ProSitePatterns PS00080 Multicopper oxidases signature 2. 484 495 - T 14-10-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 PACID_15320 4b0e7f47f6be3cda0cac49b15c02da63 113 Pfam PF16945 Putative lactococcus lactis phage r1t holin 3 65 5.4E-7 T 14-10-2018 IPR020109 Holin, r1t-type PACID_15160 5490eb2f49252928ac50ca45ec0f4eb0 146 PRINTS PR00332 Histidine triad family signature 25 43 9.9E-15 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_15160 5490eb2f49252928ac50ca45ec0f4eb0 146 PRINTS PR00332 Histidine triad family signature 87 97 9.9E-15 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_15160 5490eb2f49252928ac50ca45ec0f4eb0 146 PRINTS PR00332 Histidine triad family signature 4 20 9.9E-15 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_15160 5490eb2f49252928ac50ca45ec0f4eb0 146 Gene3D G3DSA:3.30.428.10 1 134 3.4E-33 T 14-10-2018 IPR036265 HIT-like superfamily PACID_15160 5490eb2f49252928ac50ca45ec0f4eb0 146 Pfam PF01230 HIT domain 11 100 1.9E-18 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_15160 5490eb2f49252928ac50ca45ec0f4eb0 146 SUPERFAMILY SSF54197 4 131 2.94E-34 T 14-10-2018 IPR036265 HIT-like superfamily PACID_33280 f60c7f46510d11d1f5331e355dd19d06 355 Pfam PF00962 Adenosine/AMP deaminase 12 342 1.3E-65 T 14-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 PACID_33280 f60c7f46510d11d1f5331e355dd19d06 355 SUPERFAMILY SSF51556 6 350 1.88E-65 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_33280 f60c7f46510d11d1f5331e355dd19d06 355 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 12 344 1.2E-69 T 14-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 PACID_33280 f60c7f46510d11d1f5331e355dd19d06 355 Gene3D G3DSA:3.20.20.140 4 353 3.7E-92 T 14-10-2018 PACID_12290 1faec809fd64457a3be0079288a28fc8 231 SUPERFAMILY SSF81452 32 230 1.57E-52 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12290 1faec809fd64457a3be0079288a28fc8 231 Gene3D G3DSA:1.20.120.80 30 231 6.1E-52 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_12290 1faec809fd64457a3be0079288a28fc8 231 Pfam PF00510 Cytochrome c oxidase subunit III 33 229 8.8E-22 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_07960 fcc2eafc8d61744d9c37523a2a84393f 341 Gene3D G3DSA:3.20.20.70 1 341 5.5E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_07960 fcc2eafc8d61744d9c37523a2a84393f 341 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 86 97 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PACID_07960 fcc2eafc8d61744d9c37523a2a84393f 341 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 10 337 3.2E-71 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PACID_07960 fcc2eafc8d61744d9c37523a2a84393f 341 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 158 169 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PACID_07960 fcc2eafc8d61744d9c37523a2a84393f 341 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 3 334 4.2E-125 T 14-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 PACID_07960 fcc2eafc8d61744d9c37523a2a84393f 341 PIRSF PIRSF001359 6 338 1.6E-63 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PACID_07960 fcc2eafc8d61744d9c37523a2a84393f 341 Pfam PF01116 Fructose-bisphosphate aldolase class-II 9 336 6.0E-79 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PACID_07960 fcc2eafc8d61744d9c37523a2a84393f 341 SUPERFAMILY SSF51569 4 337 2.34E-95 T 14-10-2018 PACID_18390 a27d23da8661bb7a5c9f6e6064dfafd8 468 SUPERFAMILY SSF53383 27 447 1.59E-128 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_18390 a27d23da8661bb7a5c9f6e6064dfafd8 468 Gene3D G3DSA:3.40.640.10 72 363 4.6E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_18390 a27d23da8661bb7a5c9f6e6064dfafd8 468 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 29 450 9.7E-192 T 14-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 PACID_18390 a27d23da8661bb7a5c9f6e6064dfafd8 468 Gene3D G3DSA:3.90.1150.160 365 468 7.0E-29 T 14-10-2018 PACID_18390 a27d23da8661bb7a5c9f6e6064dfafd8 468 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 44 374 1.4E-72 T 14-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 PACID_08470 0394d25e53583827a2b36c2a9b3a89f3 310 Pfam PF03780 Asp23 family, cell envelope-related function 2 96 2.1E-6 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 PACID_17680 161ef0293283ad3167b12bbbd255587a 114 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 9 79 2.6E-22 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_17680 161ef0293283ad3167b12bbbd255587a 114 SUPERFAMILY SSF63562 9 90 1.2E-25 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PACID_17680 161ef0293283ad3167b12bbbd255587a 114 Gene3D G3DSA:3.90.940.10 9 105 6.4E-23 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PACID_17680 161ef0293283ad3167b12bbbd255587a 114 SMART SM01409 16 80 1.7E-14 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PACID_17680 161ef0293283ad3167b12bbbd255587a 114 Pfam PF01192 RNA polymerase Rpb6 17 78 6.0E-15 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 PACID_17680 161ef0293283ad3167b12bbbd255587a 114 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 9 81 15.571 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 PACID_25680 79d3ec2e158687ee10d66bc0b77be29c 79 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 4 63 17.925 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25680 79d3ec2e158687ee10d66bc0b77be29c 79 TIGRFAM TIGR00012 L29: ribosomal protein uL29 8 63 3.2E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25680 79d3ec2e158687ee10d66bc0b77be29c 79 ProSitePatterns PS00579 Ribosomal protein L29 signature. 42 56 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25680 79d3ec2e158687ee10d66bc0b77be29c 79 SUPERFAMILY SSF46561 4 66 5.23E-23 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25680 79d3ec2e158687ee10d66bc0b77be29c 79 Gene3D G3DSA:1.10.287.310 4 69 1.5E-27 T 14-10-2018 PACID_25680 79d3ec2e158687ee10d66bc0b77be29c 79 Pfam PF00831 Ribosomal L29 protein 8 63 6.2E-26 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_00010 462732d2fbdfb13583192560856df927 490 SMART SM00760 397 466 3.4E-37 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PACID_00010 462732d2fbdfb13583192560856df927 490 Gene3D G3DSA:3.40.50.300 136 317 2.2E-52 T 14-10-2018 PACID_00010 462732d2fbdfb13583192560856df927 490 Pfam PF00308 Bacterial dnaA protein 153 370 8.0E-98 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA PACID_00010 462732d2fbdfb13583192560856df927 490 Gene3D G3DSA:1.10.1750.10 393 490 1.3E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 PACID_00010 462732d2fbdfb13583192560856df927 490 SMART SM00382 185 313 1.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_00010 462732d2fbdfb13583192560856df927 490 SUPERFAMILY SSF52540 152 364 1.24E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_00010 462732d2fbdfb13583192560856df927 490 ProSitePatterns PS01008 DnaA protein signature. 447 466 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PACID_00010 462732d2fbdfb13583192560856df927 490 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 399 466 1.3E-30 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 PACID_00010 462732d2fbdfb13583192560856df927 490 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 39 487 5.7E-160 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PACID_00010 462732d2fbdfb13583192560856df927 490 Gene3D G3DSA:3.30.300.180 23 96 5.5E-8 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily PACID_00010 462732d2fbdfb13583192560856df927 490 Gene3D G3DSA:1.10.8.60 319 389 2.0E-26 T 14-10-2018 PACID_00010 462732d2fbdfb13583192560856df927 490 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 21 488 31.944 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 PACID_00010 462732d2fbdfb13583192560856df927 490 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 284 311 1.8E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PACID_00010 462732d2fbdfb13583192560856df927 490 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 447 466 1.8E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PACID_00010 462732d2fbdfb13583192560856df927 490 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 250 264 1.8E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PACID_00010 462732d2fbdfb13583192560856df927 490 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 186 206 1.8E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PACID_00010 462732d2fbdfb13583192560856df927 490 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 218 232 1.8E-50 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like PACID_00010 462732d2fbdfb13583192560856df927 490 SUPERFAMILY SSF48295 384 489 1.23E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 PACID_02970 c56a384d755a9aaad1b8cc707d71597c 351 Gene3D G3DSA:3.90.180.10 1 348 3.5E-102 T 14-10-2018 PACID_02970 c56a384d755a9aaad1b8cc707d71597c 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 135 1.8E-32 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_02970 c56a384d755a9aaad1b8cc707d71597c 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 PACID_02970 c56a384d755a9aaad1b8cc707d71597c 351 SUPERFAMILY SSF50129 1 173 6.13E-55 T 14-10-2018 IPR011032 GroES-like superfamily PACID_02970 c56a384d755a9aaad1b8cc707d71597c 351 SUPERFAMILY SSF51735 141 313 8.12E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_02970 c56a384d755a9aaad1b8cc707d71597c 351 SMART SM00829 11 346 1.3E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_02970 c56a384d755a9aaad1b8cc707d71597c 351 Pfam PF00107 Zinc-binding dehydrogenase 179 308 4.2E-30 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_25760 f4e826471ed4fa29145ba0c98226f1af 223 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 7 213 39.529 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25760 f4e826471ed4fa29145ba0c98226f1af 223 Gene3D G3DSA:2.40.50.620 37 100 2.3E-21 T 14-10-2018 PACID_25760 f4e826471ed4fa29145ba0c98226f1af 223 Gene3D G3DSA:2.40.30.10 124 216 5.3E-18 T 14-10-2018 PACID_25760 f4e826471ed4fa29145ba0c98226f1af 223 ProSitePatterns PS00474 Ribosomal protein L3 signature. 107 130 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site PACID_25760 f4e826471ed4fa29145ba0c98226f1af 223 Pfam PF00297 Ribosomal protein L3 100 188 2.7E-17 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25760 f4e826471ed4fa29145ba0c98226f1af 223 SUPERFAMILY SSF50447 6 217 5.83E-83 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily PACID_25760 f4e826471ed4fa29145ba0c98226f1af 223 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 9 210 1.3E-89 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_04770 5ee46f764bb3dffdd4df9860a510ab3f 692 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 389 674 3.0E-91 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 PACID_04770 5ee46f764bb3dffdd4df9860a510ab3f 692 Gene3D G3DSA:3.40.50.2300 175 285 1.9E-37 T 14-10-2018 PACID_04770 5ee46f764bb3dffdd4df9860a510ab3f 692 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 180 270 3.3E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PACID_04770 5ee46f764bb3dffdd4df9860a510ab3f 692 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 179 262 2.4E-26 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 PACID_04770 5ee46f764bb3dffdd4df9860a510ab3f 692 Gene3D G3DSA:3.40.930.10 2 147 2.0E-36 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_04770 5ee46f764bb3dffdd4df9860a510ab3f 692 SUPERFAMILY SSF52794 177 274 3.66E-32 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 PACID_04770 5ee46f764bb3dffdd4df9860a510ab3f 692 SUPERFAMILY SSF55804 3 145 6.93E-32 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_04770 5ee46f764bb3dffdd4df9860a510ab3f 692 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 1.1E-27 T 14-10-2018 IPR002178 PTS EIIA type-2 domain PACID_09380 c11beca4afa215692ab9257e5a449435 328 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 231 2.2E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_09380 c11beca4afa215692ab9257e5a449435 328 SUPERFAMILY SSF55347 125 282 7.85E-25 T 14-10-2018 PACID_09380 c11beca4afa215692ab9257e5a449435 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 120 7.7E-28 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_09380 c11beca4afa215692ab9257e5a449435 328 Gene3D G3DSA:3.30.360.10 139 268 4.7E-100 T 14-10-2018 PACID_09380 c11beca4afa215692ab9257e5a449435 328 SUPERFAMILY SSF51735 2 144 1.01E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_09380 c11beca4afa215692ab9257e5a449435 328 Gene3D G3DSA:3.40.50.720 3 317 4.7E-100 T 14-10-2018 PACID_09380 c11beca4afa215692ab9257e5a449435 328 TIGRFAM TIGR04380 myo_inos_iolG: inositol 2-dehydrogenase 1 327 4.8E-115 T 14-10-2018 IPR030827 Inositol 2-dehydrogenase PACID_18580 15770018ceb26844e6861db308a2129d 311 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 PACID_18580 15770018ceb26844e6861db308a2129d 311 SUPERFAMILY SSF53686 3 306 3.01E-100 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PACID_18580 15770018ceb26844e6861db308a2129d 311 Gene3D G3DSA:3.40.50.1100 46 145 1.6E-120 T 14-10-2018 PACID_18580 15770018ceb26844e6861db308a2129d 311 Gene3D G3DSA:3.40.50.1100 7 302 1.6E-120 T 14-10-2018 PACID_18580 15770018ceb26844e6861db308a2129d 311 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 294 4.3E-68 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PACID_18580 15770018ceb26844e6861db308a2129d 311 TIGRFAM TIGR01136 cysKM: cysteine synthase 8 306 3.7E-122 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 PACID_18580 15770018ceb26844e6861db308a2129d 311 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 306 7.3E-125 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 PACID_24000 3eda24202c33342730eb806ac08e4a06 353 SUPERFAMILY SSF53697 61 341 1.93E-33 T 14-10-2018 PACID_24000 3eda24202c33342730eb806ac08e4a06 353 Pfam PF10432 Bacterial phospho-glucose isomerase C-terminal SIS domain 199 341 3.8E-6 T 14-10-2018 IPR019490 Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase, C-terminal GO:0004347|GO:0004476|GO:0005975 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00051+5.3.1.8|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.8+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 PACID_02010 ea562493b7f7810ca283bd03c90d485f 190 SUPERFAMILY SSF51735 3 174 2.41E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_02010 ea562493b7f7810ca283bd03c90d485f 190 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 34 75 2.5E-6 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PACID_02010 ea562493b7f7810ca283bd03c90d485f 190 Gene3D G3DSA:3.40.50.720 1 169 2.8E-44 T 14-10-2018 PACID_09000 0aa49f100dff71d59ace34992dc32fb8 250 SUPERFAMILY SSF53335 37 250 4.77E-17 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_09000 0aa49f100dff71d59ace34992dc32fb8 250 Pfam PF08241 Methyltransferase domain 52 139 6.0E-7 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PACID_09000 0aa49f100dff71d59ace34992dc32fb8 250 Gene3D G3DSA:3.40.50.150 13 209 6.6E-12 T 14-10-2018 PACID_20520 784600efea3d5186881274c1d0aba082 239 Pfam PF01614 Bacterial transcriptional regulator 124 231 2.4E-17 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal PACID_20520 784600efea3d5186881274c1d0aba082 239 SUPERFAMILY SSF46785 8 75 2.28E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_20520 784600efea3d5186881274c1d0aba082 239 Pfam PF09339 IclR helix-turn-helix domain 10 57 1.3E-9 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PACID_20520 784600efea3d5186881274c1d0aba082 239 SUPERFAMILY SSF55781 62 234 9.81E-36 T 14-10-2018 PACID_20520 784600efea3d5186881274c1d0aba082 239 Gene3D G3DSA:3.30.450.40 71 237 1.0E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily PACID_20520 784600efea3d5186881274c1d0aba082 239 SMART SM00346 7 93 3.3E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 PACID_20520 784600efea3d5186881274c1d0aba082 239 Gene3D G3DSA:1.10.10.10 2 70 1.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_12650 4099d5b3e30be2d302745c3f74348832 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 8.1E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_12650 4099d5b3e30be2d302745c3f74348832 226 SMART SM00345 10 68 3.9E-4 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_12650 4099d5b3e30be2d302745c3f74348832 226 Gene3D G3DSA:1.20.120.530 91 225 2.2E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PACID_12650 4099d5b3e30be2d302745c3f74348832 226 SUPERFAMILY SSF46785 6 72 2.2E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_12650 4099d5b3e30be2d302745c3f74348832 226 Pfam PF07729 FCD domain 99 218 1.0E-21 T 14-10-2018 IPR011711 GntR, C-terminal PACID_12650 4099d5b3e30be2d302745c3f74348832 226 SUPERFAMILY SSF48008 93 223 3.66E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal PACID_12650 4099d5b3e30be2d302745c3f74348832 226 Gene3D G3DSA:1.10.10.10 4 68 2.5E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_12650 4099d5b3e30be2d302745c3f74348832 226 SMART SM00895 97 219 2.7E-16 T 14-10-2018 IPR011711 GntR, C-terminal PACID_06670 ed914d391017918aea7bba310972b113 118 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.2E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_06670 ed914d391017918aea7bba310972b113 118 SUPERFAMILY SSF46785 6 86 1.13E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_06670 ed914d391017918aea7bba310972b113 118 Gene3D G3DSA:1.10.10.10 10 118 1.7E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_06670 ed914d391017918aea7bba310972b113 118 SMART SM00345 17 76 2.1E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_12840 2282a70d6861d8eef841eb704ec141be 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 33 385 2.4E-106 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_12840 2282a70d6861d8eef841eb704ec141be 414 Pfam PF01098 Cell cycle protein 35 386 1.2E-84 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_20550 7bffc5497f5f1fc26c8c8feac02a9cca 314 Pfam PF02517 CAAX protease self-immunity 164 252 6.9E-13 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 PACID_11620 c823a8f44fcb45f7affdc32f11f4f355 291 Gene3D G3DSA:3.40.710.10 61 283 2.0E-13 T 14-10-2018 PACID_11620 c823a8f44fcb45f7affdc32f11f4f355 291 SUPERFAMILY SSF56601 70 269 1.27E-9 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_19920 a59eacc3a73381ca70f3b5d476bf4ed2 323 Gene3D G3DSA:1.10.3720.10 92 309 2.5E-16 T 14-10-2018 IPR035906 MetI-like superfamily PACID_19920 a59eacc3a73381ca70f3b5d476bf4ed2 323 SUPERFAMILY SSF161098 91 302 5.07E-16 T 14-10-2018 IPR035906 MetI-like superfamily PACID_19920 a59eacc3a73381ca70f3b5d476bf4ed2 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 314 2.1E-30 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 SMART SM01134 74 234 8.6E-59 T 14-10-2018 PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 Gene3D G3DSA:1.10.10.10 4 90 6.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 SUPERFAMILY SSF100950 78 234 1.36E-28 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 SUPERFAMILY SSF46785 5 60 1.88E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 8.3E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 8.3E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 SMART SM00420 5 57 6.5E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 2.4E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_07410 df02dd257660dbcc54e114ca0aab5d59 253 Pfam PF00455 DeoR C terminal sensor domain 76 233 2.4E-46 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PACID_27640 c5534d201ca2768fdf0dfec63fc296d5 78 Gene3D G3DSA:2.30.170.40 2 78 2.4E-28 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_27640 c5534d201ca2768fdf0dfec63fc296d5 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 5.5E-24 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27640 c5534d201ca2768fdf0dfec63fc296d5 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.172 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27640 c5534d201ca2768fdf0dfec63fc296d5 78 SUPERFAMILY SSF143800 2 77 4.91E-27 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_27640 c5534d201ca2768fdf0dfec63fc296d5 78 Pfam PF00830 Ribosomal L28 family 3 61 7.7E-24 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 Pfam PF13183 4Fe-4S dicluster domain 338 407 5.2E-11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 Pfam PF02589 LUD domain 94 322 1.3E-48 T 14-10-2018 IPR003741 LUD domain PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 SUPERFAMILY SSF100950 89 323 3.6E-33 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 43 446 6.3E-138 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 Gene3D G3DSA:1.10.1060.10 320 426 1.2E-6 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 341 352 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 393 404 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 SUPERFAMILY SSF54862 318 425 1.17E-16 T 14-10-2018 PACID_05240 4da8f8538211bf9afefc9be6dc45385a 511 Gene3D G3DSA:3.40.50.10420 156 307 2.6E-6 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PACID_16040 7e49b01ec440b47e114b25db8a13e428 294 SUPERFAMILY SSF52402 157 294 7.28E-18 T 14-10-2018 PACID_16040 7e49b01ec440b47e114b25db8a13e428 294 PRINTS PR01438 Universal stress protein signature 123 145 6.6E-10 T 14-10-2018 IPR006015 Universal stress protein A PACID_16040 7e49b01ec440b47e114b25db8a13e428 294 PRINTS PR01438 Universal stress protein signature 8 26 6.6E-10 T 14-10-2018 IPR006015 Universal stress protein A PACID_16040 7e49b01ec440b47e114b25db8a13e428 294 PRINTS PR01438 Universal stress protein signature 105 117 6.6E-10 T 14-10-2018 IPR006015 Universal stress protein A PACID_16040 7e49b01ec440b47e114b25db8a13e428 294 Gene3D G3DSA:3.40.50.12370 9 294 1.0E-52 T 14-10-2018 PACID_16040 7e49b01ec440b47e114b25db8a13e428 294 SUPERFAMILY SSF52402 12 145 1.67E-24 T 14-10-2018 PACID_16040 7e49b01ec440b47e114b25db8a13e428 294 Pfam PF00582 Universal stress protein family 157 294 1.6E-14 T 14-10-2018 IPR006016 UspA PACID_16040 7e49b01ec440b47e114b25db8a13e428 294 Pfam PF00582 Universal stress protein family 11 144 3.1E-18 T 14-10-2018 IPR006016 UspA PACID_24410 ea10ae6c17f7d3e63e2fee10dc0ae59f 166 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 26 2.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_24410 ea10ae6c17f7d3e63e2fee10dc0ae59f 166 SUPERFAMILY SSF48498 50 160 8.9E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_24410 ea10ae6c17f7d3e63e2fee10dc0ae59f 166 Gene3D G3DSA:1.10.10.60 1 25 9.7E-9 T 14-10-2018 PACID_24410 ea10ae6c17f7d3e63e2fee10dc0ae59f 166 Gene3D G3DSA:1.10.357.10 26 164 2.1E-10 T 14-10-2018 PACID_24410 ea10ae6c17f7d3e63e2fee10dc0ae59f 166 SUPERFAMILY SSF46689 1 37 1.54E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_10530 5fa5e9ee0ae96f301b76306dd67cc6ff 304 Gene3D G3DSA:3.10.180.70 1 147 7.9E-39 T 14-10-2018 PACID_10530 5fa5e9ee0ae96f301b76306dd67cc6ff 304 Gene3D G3DSA:3.10.180.70 148 304 1.7E-36 T 14-10-2018 PACID_10530 5fa5e9ee0ae96f301b76306dd67cc6ff 304 SUPERFAMILY SSF54593 4 140 1.5E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_10530 5fa5e9ee0ae96f301b76306dd67cc6ff 304 SUPERFAMILY SSF54593 150 304 9.21E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_10530 5fa5e9ee0ae96f301b76306dd67cc6ff 304 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 150 276 4.7E-29 T 14-10-2018 IPR028973 PhnB-like PACID_10530 5fa5e9ee0ae96f301b76306dd67cc6ff 304 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 137 7.5E-25 T 14-10-2018 IPR028973 PhnB-like PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 1.9E-27 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 1.9E-27 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 137 155 1.9E-27 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 180 198 1.9E-27 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 14 33 1.9E-27 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 Gene3D G3DSA:3.30.390.30 352 472 2.5E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 353 462 4.7E-24 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 Gene3D G3DSA:3.50.50.60 149 275 1.3E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 SUPERFAMILY SSF51905 9 372 3.21E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 SUPERFAMILY SSF55424 350 466 1.89E-29 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 180 205 2.5E-44 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 2.5E-44 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 2.5E-44 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 349 370 2.5E-44 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 140 149 2.5E-44 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 2.5E-44 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 13 35 2.5E-44 T 14-10-2018 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 PIRSF PIRSF000350 1 453 3.2E-73 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 330 1.8E-47 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_27840 de46c8a184aed2f7edf57c1cfb24425f 473 Gene3D G3DSA:3.50.50.60 12 337 1.3E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_13790 b55bc22d86f7713d4c62fd10f8c16f4d 779 Pfam PF13567 Domain of unknown function (DUF4131) 40 172 1.7E-7 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 PACID_13790 b55bc22d86f7713d4c62fd10f8c16f4d 779 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 248 417 9.9E-17 T 14-10-2018 IPR004477 ComEC/Rec2-related protein PACID_13790 b55bc22d86f7713d4c62fd10f8c16f4d 779 SMART SM00849 532 709 1.1E-6 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_13790 b55bc22d86f7713d4c62fd10f8c16f4d 779 Pfam PF03772 Competence protein 226 489 1.8E-45 T 14-10-2018 IPR004477 ComEC/Rec2-related protein PACID_13790 b55bc22d86f7713d4c62fd10f8c16f4d 779 Gene3D G3DSA:3.60.15.10 523 776 5.1E-45 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_13790 b55bc22d86f7713d4c62fd10f8c16f4d 779 Pfam PF00753 Metallo-beta-lactamase superfamily 530 629 3.6E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_13790 b55bc22d86f7713d4c62fd10f8c16f4d 779 SUPERFAMILY SSF56281 520 776 2.1E-34 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 158 174 1.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 174 186 1.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 158 1.4E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 SUPERFAMILY SSF52172 7 121 1.71E-9 T 14-10-2018 IPR011006 CheY-like superfamily PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 Gene3D G3DSA:3.40.50.12740 7 204 1.3E-30 T 14-10-2018 PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 SUPERFAMILY SSF46894 137 204 2.72E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 196 1.4E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 ProSitePatterns PS00622 LuxR-type HTH domain signature. 158 185 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_29560 508334c1005e6eb036f12afda5f27ac8 222 SMART SM00421 141 198 1.4E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_32280 bc3493822346550362db7994310732bc 257 Gene3D G3DSA:2.40.30.10 5 114 1.3E-15 T 14-10-2018 PACID_32280 bc3493822346550362db7994310732bc 257 Pfam PF04954 Siderophore-interacting protein 124 233 5.3E-21 T 14-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain PACID_32280 bc3493822346550362db7994310732bc 257 Pfam PF08021 Siderophore-interacting FAD-binding domain 31 114 3.9E-13 T 14-10-2018 IPR013113 FAD-binding 9, siderophore-interacting PACID_32280 bc3493822346550362db7994310732bc 257 Gene3D G3DSA:3.40.50.80 118 255 5.8E-28 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain PACID_32280 bc3493822346550362db7994310732bc 257 SUPERFAMILY SSF63380 30 118 5.91E-8 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PACID_11030 36f44a803d4eaedb19a1a37063143976 228 Gene3D G3DSA:3.40.50.12740 1 219 5.6E-50 T 14-10-2018 PACID_11030 36f44a803d4eaedb19a1a37063143976 228 SUPERFAMILY SSF52172 1 117 1.99E-26 T 14-10-2018 IPR011006 CheY-like superfamily PACID_11030 36f44a803d4eaedb19a1a37063143976 228 Pfam PF00196 Bacterial regulatory proteins, luxR family 159 211 1.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_11030 36f44a803d4eaedb19a1a37063143976 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 5.5E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_11030 36f44a803d4eaedb19a1a37063143976 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 5.5E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_11030 36f44a803d4eaedb19a1a37063143976 228 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 5.5E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_11030 36f44a803d4eaedb19a1a37063143976 228 SMART SM00448 1 111 1.2E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_11030 36f44a803d4eaedb19a1a37063143976 228 SMART SM00421 156 213 2.5E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_11030 36f44a803d4eaedb19a1a37063143976 228 SUPERFAMILY SSF46894 152 220 6.12E-15 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_11030 36f44a803d4eaedb19a1a37063143976 228 Pfam PF00072 Response regulator receiver domain 1 110 3.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_00080 3fd7f9ec7923d716bff9184b1e1777bf 210 Pfam PF05258 Protein of unknown function (DUF721) 98 185 4.6E-22 T 14-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 PACID_18300 d64b391bed24259c43ab9052d7987435 152 Gene3D G3DSA:3.30.40.60 2 55 1.5E-5 T 14-10-2018 PACID_18300 d64b391bed24259c43ab9052d7987435 152 SMART SM00507 4 56 2.7E-9 T 14-10-2018 IPR003615 HNH nuclease PACID_18300 d64b391bed24259c43ab9052d7987435 152 Pfam PF01844 HNH endonuclease 26 53 1.0E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PACID_04160 b584992569587a2710e01d3cbe3c6200 198 Gene3D G3DSA:3.40.50.720 2 143 1.2E-46 T 14-10-2018 PACID_04160 b584992569587a2710e01d3cbe3c6200 198 Gene3D G3DSA:3.90.180.10 144 185 1.2E-46 T 14-10-2018 PACID_04160 b584992569587a2710e01d3cbe3c6200 198 Pfam PF00107 Zinc-binding dehydrogenase 26 156 8.9E-31 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_04160 b584992569587a2710e01d3cbe3c6200 198 SUPERFAMILY SSF51735 1 169 5.54E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_22450 66f6ecdf08043e219bc518c9c17e90c4 135 SUPERFAMILY SSF117916 35 128 6.54E-26 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PACID_22450 66f6ecdf08043e219bc518c9c17e90c4 135 Gene3D G3DSA:3.30.300.130 32 130 1.5E-29 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily PACID_22450 66f6ecdf08043e219bc518c9c17e90c4 135 Pfam PF01883 Iron-sulfur cluster assembly protein 38 102 1.1E-17 T 14-10-2018 IPR002744 MIP18 family-like PACID_32350 51620c7fb2fee7d090db761eab8686e4 96 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 6.8E-25 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32350 51620c7fb2fee7d090db761eab8686e4 96 Gene3D G3DSA:3.30.70.60 1 96 2.2E-30 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 PACID_32350 51620c7fb2fee7d090db761eab8686e4 96 SUPERFAMILY SSF54995 1 94 1.16E-31 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32350 51620c7fb2fee7d090db761eab8686e4 96 Pfam PF01250 Ribosomal protein S6 3 92 3.1E-28 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_32350 51620c7fb2fee7d090db761eab8686e4 96 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 20.261 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 PACID_23520 2265b8a364815429998309d1d80bb821 206 SUPERFAMILY SSF52172 1 133 3.56E-27 T 14-10-2018 IPR011006 CheY-like superfamily PACID_23520 2265b8a364815429998309d1d80bb821 206 SUPERFAMILY SSF46894 134 205 2.07E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_23520 2265b8a364815429998309d1d80bb821 206 SMART SM00421 142 199 7.3E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_23520 2265b8a364815429998309d1d80bb821 206 Gene3D G3DSA:3.40.50.12740 2 205 3.2E-61 T 14-10-2018 PACID_23520 2265b8a364815429998309d1d80bb821 206 Pfam PF00072 Response regulator receiver domain 4 116 1.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_23520 2265b8a364815429998309d1d80bb821 206 SMART SM00448 2 116 2.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_23520 2265b8a364815429998309d1d80bb821 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 145 159 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_23520 2265b8a364815429998309d1d80bb821 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 175 187 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_23520 2265b8a364815429998309d1d80bb821 206 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 175 2.9E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_23520 2265b8a364815429998309d1d80bb821 206 Pfam PF00196 Bacterial regulatory proteins, luxR family 144 198 5.3E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_23520 2265b8a364815429998309d1d80bb821 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 159 186 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_05160 dc08b32edc366e5b5d5515a4d670fbbd 336 SUPERFAMILY SSF51395 3 298 1.41E-55 T 14-10-2018 PACID_05160 dc08b32edc366e5b5d5515a4d670fbbd 336 PIRSF PIRSF000164 1 308 3.3E-35 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 PACID_05160 dc08b32edc366e5b5d5515a4d670fbbd 336 Gene3D G3DSA:3.20.20.70 5 299 2.3E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_05160 dc08b32edc366e5b5d5515a4d670fbbd 336 Pfam PF01180 Dihydroorotate dehydrogenase 5 293 2.3E-13 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 PACID_27760 d273e293f7f21b9e1707dfc8ffe15226 262 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_27760 d273e293f7f21b9e1707dfc8ffe15226 262 SUPERFAMILY SSF52540 13 247 3.47E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27760 d273e293f7f21b9e1707dfc8ffe15226 262 SMART SM00382 40 224 3.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_27760 d273e293f7f21b9e1707dfc8ffe15226 262 TIGRFAM TIGR03771 anch_rpt_ABC: anchored repeat-type ABC transporter, ATP-binding subunit 36 258 4.9E-97 T 14-10-2018 IPR022508 ABC transporter, anchored repeat-type, ATP-binding subunit PACID_27760 d273e293f7f21b9e1707dfc8ffe15226 262 Gene3D G3DSA:3.40.50.300 4 245 1.3E-57 T 14-10-2018 PACID_27760 d273e293f7f21b9e1707dfc8ffe15226 262 Pfam PF00005 ABC transporter 31 176 3.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_04210 5be8c66efed12162cf7c52d6399accd3 494 Pfam PF01569 PAP2 superfamily 226 311 1.5E-8 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PACID_04210 5be8c66efed12162cf7c52d6399accd3 494 SUPERFAMILY SSF48317 160 319 9.55E-22 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PACID_04210 5be8c66efed12162cf7c52d6399accd3 494 Gene3D G3DSA:1.20.144.10 221 335 1.7E-32 T 14-10-2018 PACID_11340 6f3f0f62d77cec6424752e492fd44942 277 Gene3D G3DSA:3.40.50.300 14 260 3.9E-56 T 14-10-2018 PACID_11340 6f3f0f62d77cec6424752e492fd44942 277 SMART SM00382 37 230 2.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_11340 6f3f0f62d77cec6424752e492fd44942 277 Pfam PF00005 ABC transporter 29 173 1.4E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_11340 6f3f0f62d77cec6424752e492fd44942 277 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_11340 6f3f0f62d77cec6424752e492fd44942 277 SUPERFAMILY SSF52540 14 236 2.0E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_16710 bf43fc1ca06432a69ac0b0535a596bc0 299 SUPERFAMILY SSF111331 5 298 1.57E-59 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily PACID_16710 bf43fc1ca06432a69ac0b0535a596bc0 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 128 3.4E-21 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PACID_16710 bf43fc1ca06432a69ac0b0535a596bc0 299 Gene3D G3DSA:2.60.200.40 135 291 2.4E-34 T 14-10-2018 PACID_16710 bf43fc1ca06432a69ac0b0535a596bc0 299 SMART SM00046 5 128 0.0012 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 PACID_16710 bf43fc1ca06432a69ac0b0535a596bc0 299 Gene3D G3DSA:3.40.50.10330 2 134 3.8E-27 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 PACID_33460 909189d11845cd513c0cd5f41403f0d1 595 Pfam PF01964 Radical SAM ThiC family 133 553 1.8E-200 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PACID_33460 909189d11845cd513c0cd5f41403f0d1 595 Pfam PF13667 ThiC-associated domain 36 90 1.5E-6 T 14-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PACID_33460 909189d11845cd513c0cd5f41403f0d1 595 Gene3D G3DSA:3.20.20.540 176 489 8.3E-152 T 14-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PACID_33460 909189d11845cd513c0cd5f41403f0d1 595 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 132 556 2.0E-210 T 14-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PACID_33460 909189d11845cd513c0cd5f41403f0d1 595 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 132 558 96.922 T 14-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 PACID_29310 3a674f5269ec26fe26a492ad24145174 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 305 2.0E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_29310 3a674f5269ec26fe26a492ad24145174 307 Gene3D G3DSA:1.10.3720.10 86 300 2.2E-24 T 14-10-2018 IPR035906 MetI-like superfamily PACID_29310 3a674f5269ec26fe26a492ad24145174 307 SUPERFAMILY SSF161098 93 293 1.8E-19 T 14-10-2018 IPR035906 MetI-like superfamily PACID_05220 2a353c537ab503bbd5e8e93af976a715 562 Pfam PF02652 L-lactate permease 19 551 1.3E-117 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PACID_05220 2a353c537ab503bbd5e8e93af976a715 562 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 17 551 1.7E-117 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 PACID_16300 d8169dbc97bf52dacdd1bd5eb2e97878 676 Gene3D G3DSA:1.20.1740.10 50 512 1.6E-20 T 14-10-2018 PACID_16300 d8169dbc97bf52dacdd1bd5eb2e97878 676 Pfam PF13520 Amino acid permease 52 466 1.6E-29 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_05330 7c5f322ad5891a2b033f0f0952ba6ef7 167 SUPERFAMILY SSF50475 17 166 1.02E-13 T 14-10-2018 PACID_05330 7c5f322ad5891a2b033f0f0952ba6ef7 167 Pfam PF01613 Flavin reductase like domain 23 165 3.9E-10 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PACID_05330 7c5f322ad5891a2b033f0f0952ba6ef7 167 SMART SM00903 21 166 0.0037 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PACID_05330 7c5f322ad5891a2b033f0f0952ba6ef7 167 Gene3D G3DSA:2.30.110.10 8 167 2.8E-14 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PACID_13830 c547d296a1eb469356d0673f3e996b74 638 Gene3D G3DSA:3.90.400.10 173 248 8.8E-200 T 14-10-2018 PACID_13830 c547d296a1eb469356d0673f3e996b74 638 Gene3D G3DSA:1.10.1740.10 3 83 2.0E-19 T 14-10-2018 PACID_13830 c547d296a1eb469356d0673f3e996b74 638 SUPERFAMILY SSF51445 75 553 3.84E-103 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_13830 c547d296a1eb469356d0673f3e996b74 638 SMART SM00642 88 525 2.8E-23 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_13830 c547d296a1eb469356d0673f3e996b74 638 Pfam PF00128 Alpha amylase, catalytic domain 96 307 2.4E-33 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_13830 c547d296a1eb469356d0673f3e996b74 638 Gene3D G3DSA:3.20.20.80 86 550 8.8E-200 T 14-10-2018 PACID_13830 c547d296a1eb469356d0673f3e996b74 638 Gene3D G3DSA:2.60.40.1180 557 638 1.3E-32 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta PACID_01020 59b9b757d468e47d9c0bc17040236dc7 313 SUPERFAMILY SSF52540 7 224 7.63E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01020 59b9b757d468e47d9c0bc17040236dc7 313 Gene3D G3DSA:3.40.50.300 1 237 7.1E-41 T 14-10-2018 PACID_01020 59b9b757d468e47d9c0bc17040236dc7 313 Pfam PF00005 ABC transporter 22 158 1.4E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_01020 59b9b757d468e47d9c0bc17040236dc7 313 SMART SM00382 31 211 3.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_27940 3d3f3e5f255e1767b1a9973648d81bf4 308 Pfam PF01578 Cytochrome C assembly protein 91 303 4.5E-43 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 PACID_27940 3d3f3e5f255e1767b1a9973648d81bf4 308 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 68 306 6.0E-75 T 14-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 PACID_29610 205e696f94979e94a098803d7ddafed4 337 Gene3D G3DSA:3.90.920.30 40 318 2.1E-94 T 14-10-2018 PACID_29610 205e696f94979e94a098803d7ddafed4 337 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 33 285 2.5E-77 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain PACID_07830 90b6f9ec435fd92362165cf98b402392 304 Gene3D G3DSA:3.90.550.10 5 227 1.2E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_07830 90b6f9ec435fd92362165cf98b402392 304 Pfam PF13641 Glycosyltransferase like family 2 5 212 3.5E-9 T 14-10-2018 PACID_07830 90b6f9ec435fd92362165cf98b402392 304 SUPERFAMILY SSF53448 31 247 1.13E-29 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_08170 0fed7d786fcc6fabb46bf360e2f015db 315 Pfam PF04198 Putative sugar-binding domain 61 314 5.0E-52 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 PACID_08170 0fed7d786fcc6fabb46bf360e2f015db 315 Gene3D G3DSA:1.10.10.10 2 55 8.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_08170 0fed7d786fcc6fabb46bf360e2f015db 315 SUPERFAMILY SSF100950 60 314 3.66E-57 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_08170 0fed7d786fcc6fabb46bf360e2f015db 315 Gene3D G3DSA:3.40.50.1360 56 314 2.5E-68 T 14-10-2018 PACID_22120 64d278c7544ad887a562ccb4ed5ea295 341 SUPERFAMILY SSF53300 176 319 2.7E-20 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_22120 64d278c7544ad887a562ccb4ed5ea295 341 SMART SM00327 176 335 1.8E-7 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_22120 64d278c7544ad887a562ccb4ed5ea295 341 Pfam PF05762 VWA domain containing CoxE-like protein 115 332 2.6E-53 T 14-10-2018 IPR008912 Uncharacterised protein family CoxE-like PACID_22120 64d278c7544ad887a562ccb4ed5ea295 341 Gene3D G3DSA:3.40.50.410 172 322 5.9E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_03400 d28b4629985e2c571353843fa70a535b 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 43 8.5E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_03400 d28b4629985e2c571353843fa70a535b 207 Gene3D G3DSA:1.10.357.10 1 205 4.4E-60 T 14-10-2018 PACID_03400 d28b4629985e2c571353843fa70a535b 207 SUPERFAMILY SSF46689 1 61 3.41E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_03400 d28b4629985e2c571353843fa70a535b 207 SUPERFAMILY SSF48498 71 188 1.33E-20 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 SMART SM00829 21 331 4.7E-36 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 Gene3D G3DSA:3.40.50.720 130 270 4.6E-98 T 14-10-2018 PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 149 170 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 Gene3D G3DSA:3.90.180.10 23 331 4.6E-98 T 14-10-2018 PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 38 97 4.8E-10 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 Pfam PF00107 Zinc-binding dehydrogenase 160 274 1.3E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 SUPERFAMILY SSF50129 19 158 2.13E-34 T 14-10-2018 IPR011032 GroES-like superfamily PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 19 332 2.6E-116 T 14-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 PACID_30890 bdd6a52c5e0e6d1e28f321f160abd1b1 333 SUPERFAMILY SSF51735 121 296 1.19E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_23950 cfc1efad8441cceee04d28505f40be35 271 Pfam PF10708 Protein of unknown function (DUF2510) 2 32 1.6E-11 T 14-10-2018 IPR018929 Domain of unknown function DUF2510 PACID_23950 cfc1efad8441cceee04d28505f40be35 271 Pfam PF06271 RDD family 102 261 2.0E-25 T 14-10-2018 IPR010432 RDD PACID_12200 76616608af5af9ba8a52cbac6f08a68a 118 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 14 118 4.2E-35 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 PACID_12200 76616608af5af9ba8a52cbac6f08a68a 118 Pfam PF01521 Iron-sulphur cluster biosynthesis 14 115 8.3E-19 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 PACID_12200 76616608af5af9ba8a52cbac6f08a68a 118 SUPERFAMILY SSF89360 14 108 1.18E-27 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PACID_12200 76616608af5af9ba8a52cbac6f08a68a 118 Gene3D G3DSA:2.60.300.12 13 118 1.4E-28 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 PACID_12200 76616608af5af9ba8a52cbac6f08a68a 118 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 100 117 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 PACID_10950 ba4b11bc34d8d0932fdef6ba4fe4053c 181 Gene3D G3DSA:3.40.50.1240 1 175 7.4E-37 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_10950 ba4b11bc34d8d0932fdef6ba4fe4053c 181 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 2 172 7.8E-35 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_10950 ba4b11bc34d8d0932fdef6ba4fe4053c 181 SUPERFAMILY SSF53254 2 174 2.36E-37 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_13270 d192e2794cd6d8e103a4a21ed5fbbe5d 653 SMART SM00729 268 491 1.1E-25 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PACID_13270 d192e2794cd6d8e103a4a21ed5fbbe5d 653 Pfam PF04055 Radical SAM superfamily 272 432 4.9E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_13270 d192e2794cd6d8e103a4a21ed5fbbe5d 653 TIGRFAM TIGR03960 rSAM_fuse_unch: radical SAM family uncharacterized protein 17 624 3.3E-210 T 14-10-2018 IPR023862 Conserved hypothetical protein CHP03960, radical SAM PACID_13270 d192e2794cd6d8e103a4a21ed5fbbe5d 653 Gene3D G3DSA:3.80.30.20 267 497 2.6E-17 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PACID_13270 d192e2794cd6d8e103a4a21ed5fbbe5d 653 SUPERFAMILY SSF102114 235 639 4.71E-48 T 14-10-2018 PACID_12440 fde55753ddfe5f046c8da6b8575c6fbe 397 Gene3D G3DSA:3.30.565.10 267 397 9.5E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_12440 fde55753ddfe5f046c8da6b8575c6fbe 397 SUPERFAMILY SSF55874 292 396 6.29E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_12440 fde55753ddfe5f046c8da6b8575c6fbe 397 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 308 396 8.2E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_08100 4a7971bef5f58ff107efebb7dc1eb7ff 161 Gene3D G3DSA:2.30.30.840 1 61 1.6E-22 T 14-10-2018 PACID_08100 4a7971bef5f58ff107efebb7dc1eb7ff 161 Pfam PF02559 CarD-like/TRCF domain 3 112 2.7E-17 T 14-10-2018 IPR003711 CarD-like/TRCF domain PACID_08100 4a7971bef5f58ff107efebb7dc1eb7ff 161 SUPERFAMILY SSF141259 2 67 1.15E-13 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily PACID_08100 4a7971bef5f58ff107efebb7dc1eb7ff 161 Gene3D G3DSA:1.20.58.1290 62 161 2.4E-38 T 14-10-2018 PACID_08100 4a7971bef5f58ff107efebb7dc1eb7ff 161 SMART SM01058 2 113 7.1E-33 T 14-10-2018 IPR003711 CarD-like/TRCF domain PACID_01680 8b226c557a5d1309b70ff6d0acb5ce0e 209 SUPERFAMILY SSF52833 63 192 2.87E-24 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_01680 8b226c557a5d1309b70ff6d0acb5ce0e 209 Gene3D G3DSA:3.40.30.10 60 194 1.7E-26 T 14-10-2018 PACID_01680 8b226c557a5d1309b70ff6d0acb5ce0e 209 Pfam PF00578 AhpC/TSA family 68 184 1.7E-21 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PACID_22050 2a95407e9c452f3bf5b4a84720a63b15 237 Gene3D G3DSA:3.40.1160.10 2 237 7.2E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_22050 2a95407e9c452f3bf5b4a84720a63b15 237 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 5 236 3.9E-88 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 PACID_22050 2a95407e9c452f3bf5b4a84720a63b15 237 PIRSF PIRSF005650 1 237 2.2E-86 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 PACID_22050 2a95407e9c452f3bf5b4a84720a63b15 237 SUPERFAMILY SSF53633 5 236 3.01E-68 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_22050 2a95407e9c452f3bf5b4a84720a63b15 237 Pfam PF00696 Amino acid kinase family 7 215 2.1E-27 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PACID_22050 2a95407e9c452f3bf5b4a84720a63b15 237 Hamap MF_01220_B Uridylate kinase [pyrH]. 3 236 42.022 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 PACID_08430 f505b849c2a8873325b9a1060bbfd1a4 436 SUPERFAMILY SSF56112 9 151 9.48E-7 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_08430 f505b849c2a8873325b9a1060bbfd1a4 436 Pfam PF13224 Domain of unknown function (DUF4032) 197 359 3.5E-66 T 14-10-2018 IPR025111 Domain of unknown function DUF4032 PACID_32560 55dc4a539f441654c2a5fc4a5bd96ea3 214 SUPERFAMILY SSF46894 151 202 3.03E-10 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_32560 55dc4a539f441654c2a5fc4a5bd96ea3 214 Gene3D G3DSA:3.40.50.12740 6 206 9.2E-41 T 14-10-2018 PACID_32560 55dc4a539f441654c2a5fc4a5bd96ea3 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 202 5.4E-9 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_32560 55dc4a539f441654c2a5fc4a5bd96ea3 214 SUPERFAMILY SSF52172 5 132 2.56E-23 T 14-10-2018 IPR011006 CheY-like superfamily PACID_32560 55dc4a539f441654c2a5fc4a5bd96ea3 214 SMART SM00421 146 203 1.2E-5 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_32560 55dc4a539f441654c2a5fc4a5bd96ea3 214 Pfam PF00072 Response regulator receiver domain 9 120 4.2E-17 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_32560 55dc4a539f441654c2a5fc4a5bd96ea3 214 SMART SM00448 6 119 7.8E-16 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 Gene3D G3DSA:3.40.50.300 2 245 3.9E-60 T 14-10-2018 PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 SMART SM00382 318 510 9.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 SMART SM00382 31 222 4.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 Pfam PF00005 ABC transporter 310 464 2.2E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 Pfam PF00005 ABC transporter 22 173 5.4E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 SUPERFAMILY SSF52540 288 534 3.75E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 Gene3D G3DSA:3.40.50.300 292 562 6.2E-45 T 14-10-2018 PACID_25260 c8da509fe50c55f7fe1fb25e73463ec8 570 SUPERFAMILY SSF52540 3 233 1.45E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25390 d0318bba5f52579902ff982d4fe7a44d 73 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 4 72 5.3E-36 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PACID_25390 d0318bba5f52579902ff982d4fe7a44d 73 SUPERFAMILY SSF50249 4 72 2.23E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_25390 d0318bba5f52579902ff982d4fe7a44d 73 Gene3D G3DSA:2.40.50.140 1 73 4.2E-36 T 14-10-2018 PACID_25390 d0318bba5f52579902ff982d4fe7a44d 73 SMART SM00316 5 73 8.9E-4 T 14-10-2018 IPR022967 RNA-binding domain, S1 PACID_25390 d0318bba5f52579902ff982d4fe7a44d 73 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 2 73 26.275 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 PACID_25390 d0318bba5f52579902ff982d4fe7a44d 73 Pfam PF01176 Translation initiation factor 1A / IF-1 9 71 1.7E-27 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 PACID_19530 89e7cf6ceca03b2022d6cb3992568d01 392 Gene3D G3DSA:3.40.50.2000 221 364 3.3E-29 T 14-10-2018 PACID_19530 89e7cf6ceca03b2022d6cb3992568d01 392 Pfam PF13692 Glycosyl transferases group 1 229 361 3.7E-10 T 14-10-2018 PACID_19530 89e7cf6ceca03b2022d6cb3992568d01 392 SUPERFAMILY SSF53756 116 380 1.88E-19 T 14-10-2018 PACID_12630 8f1230f7fd9523b8112982e206a7fceb 459 PIRSF PIRSF002746 14 459 4.8E-146 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PACID_12630 8f1230f7fd9523b8112982e206a7fceb 459 Pfam PF02447 GntP family permease 18 458 2.3E-144 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PACID_12630 8f1230f7fd9523b8112982e206a7fceb 459 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 19 459 2.6E-137 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 PACID_06290 1c39405dfa6c678ffa5983f3e4805154 185 Pfam PF00582 Universal stress protein family 37 170 1.1E-8 T 14-10-2018 IPR006016 UspA PACID_06290 1c39405dfa6c678ffa5983f3e4805154 185 SUPERFAMILY SSF52402 37 170 4.69E-15 T 14-10-2018 PACID_06290 1c39405dfa6c678ffa5983f3e4805154 185 Gene3D G3DSA:3.40.50.620 25 170 2.3E-15 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_14920 553f9b01aea279cbf2573e8f3e79ca0a 324 SUPERFAMILY SSF53300 89 286 4.87E-29 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_14920 553f9b01aea279cbf2573e8f3e79ca0a 324 Pfam PF13519 von Willebrand factor type A domain 95 207 4.0E-19 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_14920 553f9b01aea279cbf2573e8f3e79ca0a 324 Gene3D G3DSA:3.40.50.410 84 288 9.0E-41 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_14920 553f9b01aea279cbf2573e8f3e79ca0a 324 SMART SM00327 92 289 6.2E-17 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 Gene3D G3DSA:3.40.50.1260 9 398 4.1E-138 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 Gene3D G3DSA:3.40.50.1260 172 390 4.1E-138 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PIRSF PIRSF000724 1 402 5.5E-128 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 SUPERFAMILY SSF53748 2 400 2.36E-136 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 193 212 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 140 162 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 30 52 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 170 192 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 108 123 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 352 363 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 9 25 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 319 344 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 PRINTS PR00477 Phosphoglycerate kinase family signature 376 393 4.5E-80 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 Pfam PF00162 Phosphoglycerate kinase 5 390 6.3E-141 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 6 400 39.645 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_13200 abfe4a33d9485cae0b7f1456e8f6fd1a 402 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 14 24 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_26910 ec8fd39137a213414091da179cb1bd15 170 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 26 138 3.7E-15 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like PACID_26910 ec8fd39137a213414091da179cb1bd15 170 Gene3D G3DSA:3.30.530.20 1 164 1.4E-32 T 14-10-2018 IPR023393 START-like domain superfamily PACID_26910 ec8fd39137a213414091da179cb1bd15 170 SUPERFAMILY SSF55961 6 161 3.34E-34 T 14-10-2018 PACID_29480 c763a5a5c93bda5fb9ae1006cfb65e8d 321 SUPERFAMILY SSF69349 55 159 7.69E-6 T 14-10-2018 PACID_19640 952c126febfe7133ff69bfc4cebda670 277 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 31 224 2.8E-51 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 PACID_19640 952c126febfe7133ff69bfc4cebda670 277 PIRSF PIRSF004930 18 254 1.2E-55 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 PACID_19640 952c126febfe7133ff69bfc4cebda670 277 Pfam PF01300 Telomere recombination 39 215 7.4E-45 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 PACID_19640 952c126febfe7133ff69bfc4cebda670 277 Gene3D G3DSA:3.90.870.10 19 230 3.4E-64 T 14-10-2018 PACID_19640 952c126febfe7133ff69bfc4cebda670 277 SUPERFAMILY SSF55821 23 228 2.11E-54 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily PACID_18670 f9212f8ff96f396b6e368c4e5d923085 210 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 75 2.7E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_18670 f9212f8ff96f396b6e368c4e5d923085 210 ProSitePatterns PS01081 TetR-type HTH domain signature. 46 77 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PACID_18670 f9212f8ff96f396b6e368c4e5d923085 210 Gene3D G3DSA:1.10.357.10 19 208 1.1E-41 T 14-10-2018 PACID_18670 f9212f8ff96f396b6e368c4e5d923085 210 SUPERFAMILY SSF46689 23 94 4.29E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_14770 ec77bd9a2d3ec408672ec650c6159cb7 77 Gene3D G3DSA:1.10.1660.10 10 66 3.8E-8 T 14-10-2018 PACID_14770 ec77bd9a2d3ec408672ec650c6159cb7 77 Pfam PF12728 Helix-turn-helix domain 14 64 6.2E-10 T 14-10-2018 PACID_14770 ec77bd9a2d3ec408672ec650c6159cb7 77 SUPERFAMILY SSF46955 14 61 1.03E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PACID_08000 c2541288e57d6d23d22046a77b323eba 121 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 77 94 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_08000 c2541288e57d6d23d22046a77b323eba 121 SUPERFAMILY SSF51230 50 120 1.28E-22 T 14-10-2018 IPR011053 Single hybrid motif PACID_08000 c2541288e57d6d23d22046a77b323eba 121 Pfam PF00364 Biotin-requiring enzyme 54 118 3.3E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment PACID_08000 c2541288e57d6d23d22046a77b323eba 121 Gene3D G3DSA:2.40.50.100 45 121 2.4E-26 T 14-10-2018 PACID_18700 5a2ccc069246ac36ca6a3c0a85ef21b9 171 SUPERFAMILY SSF55729 2 151 4.51E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_18700 5a2ccc069246ac36ca6a3c0a85ef21b9 171 Pfam PF13302 Acetyltransferase (GNAT) domain 1 144 1.4E-15 T 14-10-2018 IPR000182 GNAT domain PACID_18700 5a2ccc069246ac36ca6a3c0a85ef21b9 171 Gene3D G3DSA:3.40.630.30 1 156 3.1E-23 T 14-10-2018 PACID_11180 8d143b00cf2c0cd21c5d13fca989d95d 317 SUPERFAMILY SSF53474 4 303 2.61E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_11180 8d143b00cf2c0cd21c5d13fca989d95d 317 Gene3D G3DSA:3.40.50.1820 2 309 5.7E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_11180 8d143b00cf2c0cd21c5d13fca989d95d 317 Pfam PF12146 Serine aminopeptidase, S33 25 287 2.3E-41 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 PACID_25250 85fe82112f36d50d5794e9a5eee3b49f 437 Pfam PF02361 Cobalt transport protein 58 260 1.6E-10 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component PACID_20500 4cece91cddb38909786c110b51ccec21 196 Gene3D G3DSA:3.20.19.10 1 168 4.3E-66 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 PACID_20500 4cece91cddb38909786c110b51ccec21 196 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 191 38.066 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 PACID_20500 4cece91cddb38909786c110b51ccec21 196 Pfam PF00694 Aconitase C-terminal domain 1 111 5.3E-24 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 PACID_20500 4cece91cddb38909786c110b51ccec21 196 SUPERFAMILY SSF52016 1 186 5.49E-49 T 14-10-2018 PACID_20500 4cece91cddb38909786c110b51ccec21 196 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 180 9.1E-57 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 PACID_13900 811d09f38222d27f7c399ab6133f1919 409 Pfam PF00425 chorismate binding enzyme 157 400 5.0E-58 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PACID_13900 811d09f38222d27f7c399ab6133f1919 409 Gene3D G3DSA:3.60.120.10 57 409 3.9E-81 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PACID_13900 811d09f38222d27f7c399ab6133f1919 409 SUPERFAMILY SSF56322 50 408 4.58E-65 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PACID_03640 1b13ccee32769089e9955ff38e8ae2bf 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 228 265 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_03640 1b13ccee32769089e9955ff38e8ae2bf 426 Gene3D G3DSA:3.40.640.10 67 313 5.0E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_03640 1b13ccee32769089e9955ff38e8ae2bf 426 PIRSF PIRSF000521 164 412 3.9E-19 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_03640 1b13ccee32769089e9955ff38e8ae2bf 426 PIRSF PIRSF000521 29 151 0.44 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_03640 1b13ccee32769089e9955ff38e8ae2bf 426 SUPERFAMILY SSF53383 32 411 6.69E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_03640 1b13ccee32769089e9955ff38e8ae2bf 426 Gene3D G3DSA:3.90.1150.10 39 397 5.0E-83 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_03640 1b13ccee32769089e9955ff38e8ae2bf 426 Pfam PF00202 Aminotransferase class-III 36 408 1.4E-62 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_31170 c968e07c21a31687631d7f502f528a1d 460 Gene3D G3DSA:3.20.20.80 1 346 2.8E-138 T 14-10-2018 PACID_31170 c968e07c21a31687631d7f502f528a1d 460 SUPERFAMILY SSF51445 6 338 1.16E-85 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31170 c968e07c21a31687631d7f502f528a1d 460 Gene3D G3DSA:2.60.120.260 359 458 1.3E-14 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_31170 c968e07c21a31687631d7f502f528a1d 460 SMART SM00812 6 371 1.0E-13 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 PACID_31170 c968e07c21a31687631d7f502f528a1d 460 Pfam PF01120 Alpha-L-fucosidase 45 335 3.8E-30 T 14-10-2018 IPR000933 Glycoside hydrolase, family 29 GO:0004560|GO:0005975 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 54 71 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 114 126 1.1E-26 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 114 1.1E-26 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 59 71 1.1E-26 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 127 142 1.1E-26 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 1.1E-26 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 Gene3D G3DSA:2.40.100.10 1 170 6.2E-73 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 5 168 1.9E-46 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 SUPERFAMILY SSF50891 4 169 4.97E-62 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_12350 8aba7f7e3135dccef00df97a88bd0ada 170 PIRSF PIRSF001467 1 170 3.7E-56 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 Hamap MF_01987 Ribokinase [rbsK]. 3 304 24.519 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 Pfam PF00294 pfkB family carbohydrate kinase 3 297 2.3E-55 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 SUPERFAMILY SSF53613 4 302 2.49E-68 T 14-10-2018 IPR029056 Ribokinase-like PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 PRINTS PR00990 Ribokinase signature 105 118 8.1E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 PRINTS PR00990 Ribokinase signature 170 185 8.1E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 PRINTS PR00990 Ribokinase signature 7 28 8.1E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 PRINTS PR00990 Ribokinase signature 34 53 8.1E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 PRINTS PR00990 Ribokinase signature 220 231 8.1E-30 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 PACID_00180 8c807b0f7024eca89a095ee028cd3677 309 Gene3D G3DSA:3.40.1190.20 1 304 1.2E-82 T 14-10-2018 IPR029056 Ribokinase-like PACID_23450 0daab04bbd1cf84aa291454c70b7920f 234 SUPERFAMILY SSF53681 106 206 3.11E-22 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23450 0daab04bbd1cf84aa291454c70b7920f 234 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 222 3.4E-40 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23450 0daab04bbd1cf84aa291454c70b7920f 234 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 192 202 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23450 0daab04bbd1cf84aa291454c70b7920f 234 Gene3D G3DSA:3.40.50.1860 2 220 4.5E-61 T 14-10-2018 PACID_23450 0daab04bbd1cf84aa291454c70b7920f 234 Gene3D G3DSA:3.40.50.1860 104 215 4.5E-61 T 14-10-2018 PACID_23450 0daab04bbd1cf84aa291454c70b7920f 234 TIGRFAM TIGR00035 asp_race: aspartate racemase 2 231 5.9E-43 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 PACID_23450 0daab04bbd1cf84aa291454c70b7920f 234 SUPERFAMILY SSF53681 2 116 2.03E-22 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_31770 6f892dacd27710035076d82004e7ad14 436 Gene3D G3DSA:3.40.190.10 159 428 3.0E-90 T 14-10-2018 PACID_31770 6f892dacd27710035076d82004e7ad14 436 SUPERFAMILY SSF53850 22 434 4.76E-74 T 14-10-2018 PACID_31770 6f892dacd27710035076d82004e7ad14 436 Pfam PF01547 Bacterial extracellular solute-binding protein 58 352 1.1E-33 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_31770 6f892dacd27710035076d82004e7ad14 436 Gene3D G3DSA:3.40.190.10 68 389 3.0E-90 T 14-10-2018 PACID_30420 1b016c0c373379b792fb4569eb108213 289 Pfam PF04480 Protein of unknown function (DUF559) 174 280 3.8E-6 T 14-10-2018 IPR007569 Protein of unknown function DUF559 PACID_30420 1b016c0c373379b792fb4569eb108213 289 SUPERFAMILY SSF52980 184 275 3.59E-5 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_30420 1b016c0c373379b792fb4569eb108213 289 Gene3D G3DSA:3.40.960.10 181 281 1.2E-10 T 14-10-2018 PACID_10720 5860c0c02409c6df00393f2b76c6b087 463 Pfam PF13701 Transposase DDE domain group 1 4 459 3.9E-88 T 14-10-2018 IPR025668 Transposase DDE domain PACID_22910 5860c0c02409c6df00393f2b76c6b087 463 Pfam PF13701 Transposase DDE domain group 1 4 459 3.9E-88 T 14-10-2018 IPR025668 Transposase DDE domain PACID_03830 5860c0c02409c6df00393f2b76c6b087 463 Pfam PF13701 Transposase DDE domain group 1 4 459 3.9E-88 T 14-10-2018 IPR025668 Transposase DDE domain PACID_16170 5860c0c02409c6df00393f2b76c6b087 463 Pfam PF13701 Transposase DDE domain group 1 4 459 3.9E-88 T 14-10-2018 IPR025668 Transposase DDE domain PACID_03300 5860c0c02409c6df00393f2b76c6b087 463 Pfam PF13701 Transposase DDE domain group 1 4 459 3.9E-88 T 14-10-2018 IPR025668 Transposase DDE domain PACID_17690 1b64d7cb86b3f236b70b81634ff100d9 179 ProSitePatterns PS00856 Guanylate kinase-like signature. 33 50 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 PACID_17690 1b64d7cb86b3f236b70b81634ff100d9 179 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 1 176 2.1E-65 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 PACID_17690 1b64d7cb86b3f236b70b81634ff100d9 179 Hamap MF_00328 Guanylate kinase [gmk]. 1 179 31.419 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 PACID_17690 1b64d7cb86b3f236b70b81634ff100d9 179 SMART SM00072 1 179 4.9E-51 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PACID_17690 1b64d7cb86b3f236b70b81634ff100d9 179 Pfam PF00625 Guanylate kinase 2 177 2.9E-40 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit PACID_17690 1b64d7cb86b3f236b70b81634ff100d9 179 SUPERFAMILY SSF52540 2 177 8.12E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17690 1b64d7cb86b3f236b70b81634ff100d9 179 Gene3D G3DSA:3.40.50.300 1 173 1.7E-59 T 14-10-2018 PACID_17690 1b64d7cb86b3f236b70b81634ff100d9 179 Gene3D G3DSA:3.30.63.10 30 92 1.7E-59 T 14-10-2018 PACID_04600 a7430e35c277516c4628af0b5b8fbc7e 419 Pfam PF04932 O-Antigen ligase 197 343 1.2E-8 T 14-10-2018 IPR007016 O-antigen ligase-related PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 SUPERFAMILY SSF55424 313 383 1.01E-11 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 297 1.1E-44 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 7.5E-18 T 14-10-2018 PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 7.5E-18 T 14-10-2018 PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 7.5E-18 T 14-10-2018 PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 7.5E-18 T 14-10-2018 PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 7.5E-18 T 14-10-2018 PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 Gene3D G3DSA:3.30.390.30 314 393 1.4E-9 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 SUPERFAMILY SSF51905 1 330 2.47E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 Gene3D G3DSA:3.50.50.60 7 299 1.5E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_29640 3d165c4d0d122b022087ee97c9d0c37c 393 Gene3D G3DSA:3.50.50.60 113 235 1.5E-83 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_04490 9b0bdd2b4cef57a2525cd6d46a5d7bb3 132 Gene3D G3DSA:3.40.50.2300 4 132 1.2E-51 T 14-10-2018 PACID_04490 9b0bdd2b4cef57a2525cd6d46a5d7bb3 132 SMART SM00226 5 130 5.5E-48 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PACID_04490 9b0bdd2b4cef57a2525cd6d46a5d7bb3 132 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 7 127 5.3E-23 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I PACID_04490 9b0bdd2b4cef57a2525cd6d46a5d7bb3 132 SUPERFAMILY SSF52788 5 129 1.44E-37 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily PACID_23240 ad3ae49e0928a700e8fd55e846cd4796 171 Gene3D G3DSA:2.40.50.140 1 113 1.3E-31 T 14-10-2018 PACID_23240 ad3ae49e0928a700e8fd55e846cd4796 171 SUPERFAMILY SSF50249 4 119 8.91E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_23240 ad3ae49e0928a700e8fd55e846cd4796 171 Pfam PF00436 Single-strand binding protein family 5 101 3.2E-17 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 PACID_23240 ad3ae49e0928a700e8fd55e846cd4796 171 PIRSF PIRSF002070 1 152 3.1E-21 T 14-10-2018 PACID_24170 f1232a5320c2ac85ddba88d42fd2d760 265 SUPERFAMILY SSF55681 16 204 4.97E-40 T 14-10-2018 PACID_24170 f1232a5320c2ac85ddba88d42fd2d760 265 Gene3D G3DSA:3.30.930.10 4 208 8.2E-54 T 14-10-2018 PACID_24170 f1232a5320c2ac85ddba88d42fd2d760 265 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 19 260 9.4E-31 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 PACID_24170 f1232a5320c2ac85ddba88d42fd2d760 265 Gene3D G3DSA:2.30.30.100 209 262 6.6E-8 T 14-10-2018 PACID_24170 f1232a5320c2ac85ddba88d42fd2d760 265 Pfam PF03099 Biotin/lipoate A/B protein ligase family 43 149 2.4E-7 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PACID_27670 93d28c26d50ede6eb6738af8a304e61f 56 SUPERFAMILY SSF57829 1 35 2.99E-8 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 PACID_27670 93d28c26d50ede6eb6738af8a304e61f 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 29 2.0E-9 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_27670 93d28c26d50ede6eb6738af8a304e61f 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 53 14.437 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_27670 93d28c26d50ede6eb6738af8a304e61f 56 Pfam PF01783 Ribosomal L32p protein family 2 46 3.2E-13 T 14-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_07720 b252fdec558c7e29b83715866027d067 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 199 9.0E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_07720 b252fdec558c7e29b83715866027d067 216 Gene3D G3DSA:1.10.3720.10 8 203 9.5E-23 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07720 b252fdec558c7e29b83715866027d067 216 SUPERFAMILY SSF161098 9 199 8.11E-26 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30730 5f6d49f23d2d9e30663ef26d32d7bcef 336 SMART SM00829 19 334 6.3E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_30730 5f6d49f23d2d9e30663ef26d32d7bcef 336 SUPERFAMILY SSF51735 125 302 4.05E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30730 5f6d49f23d2d9e30663ef26d32d7bcef 336 SUPERFAMILY SSF50129 5 140 1.46E-35 T 14-10-2018 IPR011032 GroES-like superfamily PACID_30730 5f6d49f23d2d9e30663ef26d32d7bcef 336 Pfam PF16884 N-terminal domain of oxidoreductase 8 110 1.2E-36 T 14-10-2018 PACID_30730 5f6d49f23d2d9e30663ef26d32d7bcef 336 Pfam PF00107 Zinc-binding dehydrogenase 160 295 1.6E-21 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_30730 5f6d49f23d2d9e30663ef26d32d7bcef 336 Gene3D G3DSA:3.90.180.10 21 333 1.4E-117 T 14-10-2018 PACID_30730 5f6d49f23d2d9e30663ef26d32d7bcef 336 Gene3D G3DSA:3.40.50.720 128 305 1.4E-117 T 14-10-2018 PACID_10490 a5b1698eb7ef7661e68578e52b2a83f6 423 Pfam PF02646 RmuC family 97 384 1.6E-86 T 14-10-2018 IPR003798 DNA recombination RmuC PACID_10270 812397405d40c9a13a58075d2ca82824 420 Gene3D G3DSA:3.10.290.10 324 418 3.6E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PACID_10270 812397405d40c9a13a58075d2ca82824 420 SUPERFAMILY SSF52374 3 321 1.13E-90 T 14-10-2018 PACID_10270 812397405d40c9a13a58075d2ca82824 420 Pfam PF00579 tRNA synthetases class I (W and Y) 29 321 3.6E-70 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_10270 812397405d40c9a13a58075d2ca82824 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 8.4E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PACID_10270 812397405d40c9a13a58075d2ca82824 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 214 226 8.4E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PACID_10270 812397405d40c9a13a58075d2ca82824 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 8.4E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PACID_10270 812397405d40c9a13a58075d2ca82824 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 8.4E-26 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PACID_10270 812397405d40c9a13a58075d2ca82824 420 SUPERFAMILY SSF55174 324 413 6.28E-12 T 14-10-2018 PACID_10270 812397405d40c9a13a58075d2ca82824 420 Gene3D G3DSA:1.10.240.10 221 323 3.7E-30 T 14-10-2018 PACID_10270 812397405d40c9a13a58075d2ca82824 420 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_10270 812397405d40c9a13a58075d2ca82824 420 Gene3D G3DSA:3.40.50.620 1 220 8.1E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_10270 812397405d40c9a13a58075d2ca82824 420 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 412 3.0E-103 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 PACID_10270 812397405d40c9a13a58075d2ca82824 420 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 418 40.677 T 14-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 PACID_21260 a4c305bc4eb0239f6e5e4c422203b612 144 SUPERFAMILY SSF52980 31 127 6.84E-18 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_21260 a4c305bc4eb0239f6e5e4c422203b612 144 Gene3D G3DSA:3.40.1350.10 33 142 9.1E-28 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 PACID_21260 a4c305bc4eb0239f6e5e4c422203b612 144 Hamap MF_00048 UPF0102 protein YraN [yraN]. 26 139 20.41 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 PACID_21260 a4c305bc4eb0239f6e5e4c422203b612 144 Pfam PF02021 Uncharacterised protein family UPF0102 33 126 1.6E-26 T 14-10-2018 IPR003509 Uncharacterised protein family UPF0102 PACID_02090 c62873d1f97bd4fa84d0d9127a6d4ab6 74 Gene3D G3DSA:1.10.357.10 1 74 1.7E-15 T 14-10-2018 PACID_02090 c62873d1f97bd4fa84d0d9127a6d4ab6 74 SUPERFAMILY SSF48498 4 74 2.27E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 Pfam PF13365 Trypsin-like peptidase domain 223 358 2.9E-22 T 14-10-2018 PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 Pfam PF02674 Colicin V production protein 7 153 3.7E-15 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 Gene3D G3DSA:2.40.10.10 283 385 9.7E-19 T 14-10-2018 PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 SUPERFAMILY SSF50494 196 380 7.26E-34 T 14-10-2018 IPR009003 Peptidase S1, PA clan PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 Gene3D G3DSA:2.40.10.10 190 280 8.3E-22 T 14-10-2018 PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 PRINTS PR00834 HtrA/DegQ protease family signature 290 314 1.4E-12 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 PRINTS PR00834 HtrA/DegQ protease family signature 252 272 1.4E-12 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 PRINTS PR00834 HtrA/DegQ protease family signature 330 347 1.4E-12 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_32220 a90d8651a0ebc4434aa535cd0ce33844 401 PRINTS PR00834 HtrA/DegQ protease family signature 231 243 1.4E-12 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 PACID_06440 803afee66560af3df0aea9d55dd27f39 324 SUPERFAMILY SSF53850 39 324 7.24E-60 T 14-10-2018 PACID_06440 803afee66560af3df0aea9d55dd27f39 324 Gene3D G3DSA:3.10.105.10 28 130 2.2E-10 T 14-10-2018 PACID_06440 803afee66560af3df0aea9d55dd27f39 324 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 46 313 3.0E-53 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PACID_06440 803afee66560af3df0aea9d55dd27f39 324 Gene3D G3DSA:3.40.190.100 131 248 9.0E-32 T 14-10-2018 PACID_06440 803afee66560af3df0aea9d55dd27f39 324 Gene3D G3DSA:3.40.190.10 249 324 2.4E-10 T 14-10-2018 PACID_16530 6be2223b1f2d0750125cd985b5f12e07 195 Pfam PF01230 HIT domain 69 159 2.6E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_16530 6be2223b1f2d0750125cd985b5f12e07 195 Gene3D G3DSA:3.30.428.10 18 195 3.8E-52 T 14-10-2018 IPR036265 HIT-like superfamily PACID_16530 6be2223b1f2d0750125cd985b5f12e07 195 SUPERFAMILY SSF54197 31 182 3.97E-38 T 14-10-2018 IPR036265 HIT-like superfamily PACID_25710 55aa70b5a5ef29889b93bc9b96f2aa86 154 Gene3D G3DSA:3.90.470.10 22 149 6.3E-43 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25710 55aa70b5a5ef29889b93bc9b96f2aa86 154 SUPERFAMILY SSF54843 22 129 5.49E-37 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25710 55aa70b5a5ef29889b93bc9b96f2aa86 154 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 24 126 4.4E-39 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25710 55aa70b5a5ef29889b93bc9b96f2aa86 154 ProSitePatterns PS00464 Ribosomal protein L22 signature. 102 126 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25710 55aa70b5a5ef29889b93bc9b96f2aa86 154 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 20 129 26.373 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25710 55aa70b5a5ef29889b93bc9b96f2aa86 154 Pfam PF00237 Ribosomal protein L22p/L17e 24 126 1.2E-32 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 PACID_08990 64c225c76ea74db94a7e68e2224b9f63 256 Gene3D G3DSA:3.40.50.1980 142 256 7.9E-9 T 14-10-2018 PACID_08990 64c225c76ea74db94a7e68e2224b9f63 256 SUPERFAMILY SSF53807 15 255 1.69E-31 T 14-10-2018 PACID_08990 64c225c76ea74db94a7e68e2224b9f63 256 Gene3D G3DSA:3.40.50.1980 6 127 6.5E-17 T 14-10-2018 PACID_16200 5ab7c1bb00d13da9e76ee1ad519f7813 384 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 49 364 5.1E-35 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 PACID_16200 5ab7c1bb00d13da9e76ee1ad519f7813 384 SUPERFAMILY SSF53649 44 375 6.24E-51 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PACID_16200 5ab7c1bb00d13da9e76ee1ad519f7813 384 Gene3D G3DSA:3.40.720.10 42 374 9.0E-39 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 PACID_30800 fed672b97e3241aa6644973d09f0ca73 886 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 560 741 2.0E-20 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain PACID_30800 fed672b97e3241aa6644973d09f0ca73 886 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 560 741 5.8E-18 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain PACID_22520 940cf49b3e96c8ab43db598a44dfbefb 252 Gene3D G3DSA:1.10.10.10 4 154 4.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_22520 940cf49b3e96c8ab43db598a44dfbefb 252 Pfam PF01022 Bacterial regulatory protein, arsR family 30 73 2.3E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_22520 940cf49b3e96c8ab43db598a44dfbefb 252 SUPERFAMILY SSF46785 29 213 1.61E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_02620 5de0a61da9b16e57ef4ec3e8b10db7a2 203 SUPERFAMILY SSF53448 10 195 2.93E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_02620 5de0a61da9b16e57ef4ec3e8b10db7a2 203 Gene3D G3DSA:3.90.550.10 6 201 1.6E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_02620 5de0a61da9b16e57ef4ec3e8b10db7a2 203 Pfam PF12804 MobA-like NTP transferase domain 12 172 1.5E-17 T 14-10-2018 IPR025877 MobA-like NTP transferase PACID_08740 80b2337c93370a238b1c4aa776162fdf 193 PIRSF PIRSF000709 4 177 6.0E-12 T 14-10-2018 PACID_08740 80b2337c93370a238b1c4aa776162fdf 193 SMART SM00855 3 159 1.8E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_08740 80b2337c93370a238b1c4aa776162fdf 193 SUPERFAMILY SSF53254 3 189 2.83E-44 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_08740 80b2337c93370a238b1c4aa776162fdf 193 Gene3D G3DSA:3.40.50.1240 2 187 1.2E-45 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_08740 80b2337c93370a238b1c4aa776162fdf 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 171 1.8E-40 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_08740 80b2337c93370a238b1c4aa776162fdf 193 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 PACID_25610 4de26d3f88b02a567ecc3117f4f87b19 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 136 302 9.0E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_25610 4de26d3f88b02a567ecc3117f4f87b19 312 SUPERFAMILY SSF161098 41 307 1.22E-65 T 14-10-2018 IPR035906 MetI-like superfamily PACID_25610 4de26d3f88b02a567ecc3117f4f87b19 312 Gene3D G3DSA:1.10.3720.10 36 302 2.6E-63 T 14-10-2018 IPR035906 MetI-like superfamily PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00097 Anthranilate synthase component II signature 124 136 1.4E-32 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00097 Anthranilate synthase component II signature 52 61 1.4E-32 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00097 Anthranilate synthase component II signature 104 112 1.4E-32 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00097 Anthranilate synthase component II signature 6 20 1.4E-32 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00097 Anthranilate synthase component II signature 79 90 1.4E-32 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00097 Anthranilate synthase component II signature 172 185 1.4E-32 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 SUPERFAMILY SSF52317 5 196 1.22E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 6 193 4.4E-67 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 9.8E-9 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 9.8E-9 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00096 Glutamine amidotransferase superfamily signature 172 185 3.4E-13 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 3.4E-13 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 3.4E-13 T 14-10-2018 PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 Pfam PF00117 Glutamine amidotransferase class-I 7 193 8.0E-53 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_05670 93e309f00d9862bef3aa56a492ebfd3d 215 Gene3D G3DSA:3.40.50.880 4 196 2.9E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_04690 a67fed886c359c1069fa83fdd8922d51 432 SUPERFAMILY SSF53756 9 425 1.73E-37 T 14-10-2018 PACID_04690 a67fed886c359c1069fa83fdd8922d51 432 Gene3D G3DSA:3.40.50.2000 118 418 2.2E-29 T 14-10-2018 PACID_04690 a67fed886c359c1069fa83fdd8922d51 432 Pfam PF13692 Glycosyl transferases group 1 250 385 5.3E-17 T 14-10-2018 PACID_04690 a67fed886c359c1069fa83fdd8922d51 432 Gene3D G3DSA:3.40.50.2000 232 410 2.2E-29 T 14-10-2018 PACID_25860 5c8b850fd0f12f86219030bf1fa8c606 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25860 5c8b850fd0f12f86219030bf1fa8c606 156 Gene3D G3DSA:1.10.455.10 2 156 4.7E-58 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily PACID_25860 5c8b850fd0f12f86219030bf1fa8c606 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 1.4E-65 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PACID_25860 5c8b850fd0f12f86219030bf1fa8c606 156 SUPERFAMILY SSF47973 1 149 4.71E-58 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily PACID_25860 5c8b850fd0f12f86219030bf1fa8c606 156 PIRSF PIRSF002122 5 156 8.9E-57 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 PACID_25860 5c8b850fd0f12f86219030bf1fa8c606 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.8E-61 T 14-10-2018 IPR023798 Ribosomal protein S7 domain PACID_25860 5c8b850fd0f12f86219030bf1fa8c606 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 34.533 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 PACID_09880 9762c9fbc188d551c450dd3de388f341 282 SUPERFAMILY SSF53335 19 278 4.65E-62 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_09880 9762c9fbc188d551c450dd3de388f341 282 SMART SM00650 35 208 4.5E-69 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 PACID_09880 9762c9fbc188d551c450dd3de388f341 282 Pfam PF00398 Ribosomal RNA adenine dimethylase 24 279 4.3E-39 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm PACID_09880 9762c9fbc188d551c450dd3de388f341 282 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 51 78 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 PACID_09880 9762c9fbc188d551c450dd3de388f341 282 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 19 279 47.852 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PACID_09880 9762c9fbc188d551c450dd3de388f341 282 Gene3D G3DSA:3.40.50.150 1 212 5.7E-58 T 14-10-2018 PACID_09880 9762c9fbc188d551c450dd3de388f341 282 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 277 2.1E-68 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 PACID_09880 9762c9fbc188d551c450dd3de388f341 282 Gene3D G3DSA:1.10.8.100 216 280 1.8E-15 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 Pfam PF01029 NusB family 17 140 1.1E-20 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 Pfam PF01189 16S rRNA methyltransferase RsmB/F 259 450 2.3E-38 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 Gene3D G3DSA:3.40.50.150 158 451 1.3E-53 T 14-10-2018 PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 SUPERFAMILY SSF48013 17 168 4.91E-29 T 14-10-2018 IPR035926 NusB-like superfamily PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 330 342 7.8E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 264 274 7.8E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 380 396 7.8E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 234 248 7.8E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 434 451 7.8E-18 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 Gene3D G3DSA:1.10.940.10 15 153 1.1E-31 T 14-10-2018 IPR035926 NusB-like superfamily PACID_17570 63e662e8ce2a7c127ce1ffd62463e105 454 SUPERFAMILY SSF53335 164 451 1.42E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_23190 976f2d7598a573ea519791f818c96957 638 Gene3D G3DSA:3.40.50.12780 354 489 7.7E-35 T 14-10-2018 PACID_23190 976f2d7598a573ea519791f818c96957 638 Pfam PF00501 AMP-binding enzyme 25 496 1.1E-85 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PACID_23190 976f2d7598a573ea519791f818c96957 638 Gene3D G3DSA:3.40.50.12780 9 353 1.7E-44 T 14-10-2018 PACID_23190 976f2d7598a573ea519791f818c96957 638 SUPERFAMILY SSF56801 18 633 4.84E-111 T 14-10-2018 PACID_23190 976f2d7598a573ea519791f818c96957 638 ProSitePatterns PS00455 Putative AMP-binding domain signature. 214 225 - T 14-10-2018 IPR020845 AMP-binding, conserved site PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 431 450 2.4E-63 T 14-10-2018 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 126 146 2.4E-63 T 14-10-2018 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 260 286 2.4E-63 T 14-10-2018 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 328 340 2.4E-63 T 14-10-2018 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 98 123 2.4E-63 T 14-10-2018 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 238 259 2.4E-63 T 14-10-2018 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 173 194 2.4E-63 T 14-10-2018 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 80 137 6.3E-24 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 100 120 1.4E-9 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 373 395 1.4E-9 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 430 452 1.4E-9 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 19 627 2.3E-202 T 14-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26300 44102b76297b68e5fbf8899ade96d8cd 635 Pfam PF00361 Proton-conducting membrane transporter 149 437 8.2E-79 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_05090 26242768b64a5e574521d761c6866763 609 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 27 414 1.3E-85 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_05090 26242768b64a5e574521d761c6866763 609 Pfam PF06965 Na+/H+ antiporter 1 22 421 5.3E-117 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_05090 26242768b64a5e574521d761c6866763 609 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 19 427 18.919 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_05090 26242768b64a5e574521d761c6866763 609 Gene3D G3DSA:3.40.30.10 441 600 3.0E-19 T 14-10-2018 PACID_05090 26242768b64a5e574521d761c6866763 609 SUPERFAMILY SSF52833 442 592 1.66E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_05090 26242768b64a5e574521d761c6866763 609 Pfam PF13462 Thioredoxin 447 592 5.1E-6 T 14-10-2018 IPR012336 Thioredoxin-like fold PACID_05090 26242768b64a5e574521d761c6866763 609 Gene3D G3DSA:1.20.1530.10 17 429 5.0E-113 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily PACID_33250 9e2ac843402fe087d51d904bba67b568 403 Gene3D G3DSA:2.40.440.10 248 388 1.0E-87 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PACID_33250 9e2ac843402fe087d51d904bba67b568 403 SUPERFAMILY SSF141523 248 373 9.02E-28 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PACID_33250 9e2ac843402fe087d51d904bba67b568 403 Pfam PF03734 L,D-transpeptidase catalytic domain 250 373 1.5E-15 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PACID_33250 9e2ac843402fe087d51d904bba67b568 403 Gene3D G3DSA:2.60.40.3710 155 399 1.0E-87 T 14-10-2018 PACID_33250 9e2ac843402fe087d51d904bba67b568 403 Gene3D G3DSA:2.60.40.3780 47 144 1.4E-14 T 14-10-2018 PACID_26250 1458a3a6665b2499146b06cc8234c31c 479 Gene3D G3DSA:1.10.220.70 55 143 8.6E-22 T 14-10-2018 PACID_26250 1458a3a6665b2499146b06cc8234c31c 479 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 11 450 9.9E-189 T 14-10-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 PACID_26250 1458a3a6665b2499146b06cc8234c31c 479 Gene3D G3DSA:2.30.170.30 2 53 5.2E-19 T 14-10-2018 PACID_26250 1458a3a6665b2499146b06cc8234c31c 479 Gene3D G3DSA:3.20.20.70 144 457 7.8E-129 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 SUPERFAMILY SSF56784 8 193 1.63E-41 T 14-10-2018 IPR036412 HAD-like superfamily PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 Gene3D G3DSA:1.10.150.240 21 88 1.9E-44 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 Gene3D G3DSA:3.40.50.150 300 494 2.8E-54 T 14-10-2018 PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 SUPERFAMILY SSF53335 238 490 3.71E-64 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 189 5.8E-26 T 14-10-2018 PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 189 6.5E-12 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 Gene3D G3DSA:3.40.50.1000 8 198 1.9E-44 T 14-10-2018 IPR023214 HAD superfamily PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 Pfam PF14801 tRNA methyltransferase complex GCD14 subunit N-term 236 285 2.7E-22 T 14-10-2018 PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 Gene3D G3DSA:3.10.330.20 234 298 1.1E-19 T 14-10-2018 PACID_17530 0fce20f23cc2091953eae7bcdaba9499 534 Pfam PF08704 tRNA methyltransferase complex GCD14 subunit 298 467 3.5E-19 T 14-10-2018 IPR014816 tRNA (1-methyladenosine) methyltransferase catalytic subunit Gcd14 GO:0016429|GO:0030488|GO:0031515 MetaCyc: PWY-6829 PACID_15120 8aac06ed440171464b74e98c686e2387 236 SUPERFAMILY SSF51366 2 230 2.66E-71 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PACID_15120 8aac06ed440171464b74e98c686e2387 236 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 225 1.9E-48 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_15120 8aac06ed440171464b74e98c686e2387 236 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 227 4.9E-63 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_15120 8aac06ed440171464b74e98c686e2387 236 SMART SM00934 5 226 1.1E-94 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_15120 8aac06ed440171464b74e98c686e2387 236 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_15120 8aac06ed440171464b74e98c686e2387 236 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 38.909 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_15120 8aac06ed440171464b74e98c686e2387 236 Gene3D G3DSA:3.20.20.70 3 235 2.1E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_26260 f8bda1e700170102c82d7480692665d5 550 Gene3D G3DSA:1.20.1740.10 36 463 3.3E-28 T 14-10-2018 PACID_26260 f8bda1e700170102c82d7480692665d5 550 PIRSF PIRSF006060 9 516 2.1E-57 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_26260 f8bda1e700170102c82d7480692665d5 550 Pfam PF13520 Amino acid permease 30 480 3.6E-54 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_13930 19452900f96fb3942c43217003cf4dee 216 Pfam PF01694 Rhomboid family 58 195 2.7E-23 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 PACID_13930 19452900f96fb3942c43217003cf4dee 216 SUPERFAMILY SSF144091 22 200 6.54E-29 T 14-10-2018 PACID_13930 19452900f96fb3942c43217003cf4dee 216 Gene3D G3DSA:1.20.1540.10 15 203 1.9E-17 T 14-10-2018 IPR035952 Rhomboid-like superfamily PACID_10930 87af7d5d1a03250e44523d9fa30c1370 250 PIRSF PIRSF000706 138 234 2.3E-28 T 14-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 PACID_10930 87af7d5d1a03250e44523d9fa30c1370 250 PIRSF PIRSF000706 1 145 4.7E-21 T 14-10-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 PACID_10930 87af7d5d1a03250e44523d9fa30c1370 250 Gene3D G3DSA:3.90.1200.10 137 233 1.9E-30 T 14-10-2018 PACID_10930 87af7d5d1a03250e44523d9fa30c1370 250 SUPERFAMILY SSF56112 11 231 2.04E-31 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_10930 87af7d5d1a03250e44523d9fa30c1370 250 Gene3D G3DSA:3.30.200.20 5 94 6.9E-10 T 14-10-2018 PACID_10930 87af7d5d1a03250e44523d9fa30c1370 250 Pfam PF01636 Phosphotransferase enzyme family 142 228 3.2E-10 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PACID_17700 3c1999fbddf36915df6e4a429205acce 107 SUPERFAMILY SSF46946 48 101 1.22E-5 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PACID_17700 3c1999fbddf36915df6e4a429205acce 107 Gene3D G3DSA:1.10.8.50 1 107 1.6E-35 T 14-10-2018 PACID_28390 48082e3209a8ea29102cd2db9c6ebbf9 293 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 143 1.8E-24 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain PACID_28390 48082e3209a8ea29102cd2db9c6ebbf9 293 SUPERFAMILY SSF48179 167 287 3.74E-21 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_28390 48082e3209a8ea29102cd2db9c6ebbf9 293 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 167 287 2.2E-19 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain PACID_28390 48082e3209a8ea29102cd2db9c6ebbf9 293 Gene3D G3DSA:1.10.1040.10 167 292 3.0E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_28390 48082e3209a8ea29102cd2db9c6ebbf9 293 Gene3D G3DSA:3.40.50.720 1 165 3.4E-51 T 14-10-2018 PACID_28390 48082e3209a8ea29102cd2db9c6ebbf9 293 SUPERFAMILY SSF51735 4 168 3.77E-10 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_11270 a20154bca56760fd779157bb3d41a187 316 Gene3D G3DSA:1.10.3720.10 50 285 4.3E-46 T 14-10-2018 IPR035906 MetI-like superfamily PACID_11270 a20154bca56760fd779157bb3d41a187 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 280 5.9E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_11270 a20154bca56760fd779157bb3d41a187 316 SUPERFAMILY SSF161098 65 268 1.7E-37 T 14-10-2018 IPR035906 MetI-like superfamily PACID_08250 482430989f32e6203282feb4a5daf8c2 319 Gene3D G3DSA:1.10.10.60 1 53 4.7E-19 T 14-10-2018 PACID_08250 482430989f32e6203282feb4a5daf8c2 319 Gene3D G3DSA:3.40.50.1360 58 319 2.9E-63 T 14-10-2018 PACID_08250 482430989f32e6203282feb4a5daf8c2 319 Pfam PF04198 Putative sugar-binding domain 62 317 2.5E-55 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 PACID_08250 482430989f32e6203282feb4a5daf8c2 319 SUPERFAMILY SSF100950 64 316 4.35E-53 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 159 319 2.0E-10 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 1 127 1.9E-19 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 348 2.7E-91 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 342 32.528 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 SMART SM00859 1 132 2.6E-30 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 SUPERFAMILY SSF55347 150 316 9.7E-35 T 14-10-2018 PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 Gene3D G3DSA:3.40.50.720 1 334 1.9E-93 T 14-10-2018 PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 Gene3D G3DSA:3.30.360.10 148 316 1.9E-93 T 14-10-2018 PACID_20350 f0b5e1e94e24c058a7bb55a02c4a20c7 348 SUPERFAMILY SSF51735 1 174 2.25E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_10790 92c8c1549ceff43d88bac6946c38fc99 507 SUPERFAMILY SSF81342 5 240 7.06E-21 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PACID_10790 92c8c1549ceff43d88bac6946c38fc99 507 Gene3D G3DSA:1.20.950.20 73 225 3.6E-13 T 14-10-2018 PACID_10790 92c8c1549ceff43d88bac6946c38fc99 507 Pfam PF01292 Prokaryotic cytochrome b561 5 234 1.6E-24 T 14-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 PACID_10790 92c8c1549ceff43d88bac6946c38fc99 507 Gene3D G3DSA:3.90.420.10 314 497 5.2E-32 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PACID_10790 92c8c1549ceff43d88bac6946c38fc99 507 SUPERFAMILY SSF56524 349 487 1.96E-30 T 14-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 PACID_10790 92c8c1549ceff43d88bac6946c38fc99 507 Pfam PF00174 Oxidoreductase molybdopterin binding domain 337 479 5.2E-23 T 14-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 PACID_08980 51597019dcd16eb4f85a97710e3f1a2c 302 Pfam PF02654 Cobalamin-5-phosphate synthase 39 288 7.2E-40 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 PACID_08980 51597019dcd16eb4f85a97710e3f1a2c 302 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 302 38.359 T 14-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 PACID_04510 bd93d9eb67bdbcf336eb6f4a46ff3356 128 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 9 121 3.1E-42 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 PACID_04510 bd93d9eb67bdbcf336eb6f4a46ff3356 128 PIRSF PIRSF028498 1 128 4.3E-53 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 Pfam PF01472 PUA domain 290 358 3.1E-18 T 14-10-2018 IPR002478 PUA domain GO:0003723 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 SMART SM00359 290 369 4.5E-13 T 14-10-2018 IPR002478 PUA domain GO:0003723 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 SUPERFAMILY SSF88697 290 380 1.44E-20 T 14-10-2018 IPR015947 PUA-like superfamily PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 ProSitePatterns PS00902 Glutamate 5-kinase signature. 223 240 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 PIRSF PIRSF000729 19 382 1.6E-118 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 Hamap MF_00456 Glutamate 5-kinase [proB]. 23 272 34.018 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 Pfam PF00696 Amino acid kinase family 24 249 3.6E-39 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 Gene3D G3DSA:3.40.1160.10 12 275 9.6E-77 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 TIGRFAM TIGR01027 proB: glutamate 5-kinase 24 379 2.7E-118 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 PRINTS PR00474 Glutamate 5-kinase family signature 134 155 1.1E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 PRINTS PR00474 Glutamate 5-kinase family signature 225 245 1.1E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 PRINTS PR00474 Glutamate 5-kinase family signature 94 122 1.1E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 PRINTS PR00474 Glutamate 5-kinase family signature 166 193 1.1E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 PRINTS PR00474 Glutamate 5-kinase family signature 60 74 1.1E-51 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 SUPERFAMILY SSF53633 24 270 3.14E-60 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_13350 b9970807b1d66c64058fb39e2271f1b0 390 Gene3D G3DSA:2.30.130.10 280 381 2.1E-29 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 PACID_13890 22b37a6081adf983f75e85698f89e598 512 SUPERFAMILY SSF52518 377 507 3.24E-13 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_13890 22b37a6081adf983f75e85698f89e598 512 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 2 170 6.6E-24 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 PACID_13890 22b37a6081adf983f75e85698f89e598 512 Gene3D G3DSA:3.40.50.970 346 511 1.1E-47 T 14-10-2018 PACID_13890 22b37a6081adf983f75e85698f89e598 512 PIRSF PIRSF004983 1 510 9.7E-104 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 PACID_13890 22b37a6081adf983f75e85698f89e598 512 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 1 401 3.5E-94 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 PACID_13890 22b37a6081adf983f75e85698f89e598 512 SUPERFAMILY SSF52518 2 180 7.36E-25 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_13890 22b37a6081adf983f75e85698f89e598 512 Gene3D G3DSA:3.40.50.970 1 183 2.3E-60 T 14-10-2018 PACID_13890 22b37a6081adf983f75e85698f89e598 512 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 1 512 26.43 T 14-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 PACID_13890 22b37a6081adf983f75e85698f89e598 512 Gene3D G3DSA:3.40.50.1220 197 329 5.5E-25 T 14-10-2018 PACID_09120 40a37b1639af4a53869f6a8cfc613a20 228 SUPERFAMILY SSF110395 3 225 5.89E-44 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 PACID_09120 40a37b1639af4a53869f6a8cfc613a20 228 Gene3D G3DSA:3.20.20.380 3 227 1.5E-48 T 14-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 PACID_09120 40a37b1639af4a53869f6a8cfc613a20 228 Pfam PF03932 CutC family 3 198 5.0E-31 T 14-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 PACID_09610 4f6389a15387abfe8f32d066ebda0b15 329 Gene3D G3DSA:3.30.530.20 169 326 7.1E-32 T 14-10-2018 IPR023393 START-like domain superfamily PACID_09610 4f6389a15387abfe8f32d066ebda0b15 329 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 189 323 1.3E-16 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like PACID_09610 4f6389a15387abfe8f32d066ebda0b15 329 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 23 159 1.4E-18 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like PACID_09610 4f6389a15387abfe8f32d066ebda0b15 329 SUPERFAMILY SSF55961 177 323 9.57E-32 T 14-10-2018 PACID_09610 4f6389a15387abfe8f32d066ebda0b15 329 Gene3D G3DSA:3.30.530.20 1 164 2.7E-41 T 14-10-2018 IPR023393 START-like domain superfamily PACID_09610 4f6389a15387abfe8f32d066ebda0b15 329 SUPERFAMILY SSF55961 12 162 7.17E-30 T 14-10-2018 PACID_31350 a061924e5f93ac1e0bcffc472aa84a99 270 Pfam PF00005 ABC transporter 39 194 1.1E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_31350 a061924e5f93ac1e0bcffc472aa84a99 270 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_31350 a061924e5f93ac1e0bcffc472aa84a99 270 Gene3D G3DSA:3.40.50.300 19 269 4.6E-78 T 14-10-2018 PACID_31350 a061924e5f93ac1e0bcffc472aa84a99 270 SUPERFAMILY SSF52540 23 265 2.6E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_31350 a061924e5f93ac1e0bcffc472aa84a99 270 PIRSF PIRSF039085 20 270 1.4E-100 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PACID_31350 a061924e5f93ac1e0bcffc472aa84a99 270 SMART SM00382 48 243 4.7E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_14680 ac34f5e3891d59dad450a0b23af3bfca 576 SUPERFAMILY SSF52540 138 552 5.31E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14680 ac34f5e3891d59dad450a0b23af3bfca 576 Gene3D G3DSA:3.40.50.300 340 555 1.5E-25 T 14-10-2018 PACID_14680 ac34f5e3891d59dad450a0b23af3bfca 576 Pfam PF12696 TraM recognition site of TraD and TraG 410 528 4.2E-29 T 14-10-2018 IPR032689 TraD/TraG, TraM recognition site PACID_33030 823a3ff52b349b3a8e0aadc073b31380 115 Gene3D G3DSA:2.30.30.110 1 115 2.8E-30 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PACID_33030 823a3ff52b349b3a8e0aadc073b31380 115 SUPERFAMILY SSF50118 2 115 1.68E-27 T 14-10-2018 PACID_33030 823a3ff52b349b3a8e0aadc073b31380 115 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 112 2.1E-23 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 PACID_33030 823a3ff52b349b3a8e0aadc073b31380 115 PIRSF PIRSF033490 1 115 7.9E-35 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 PACID_08260 a48b8054b10d8e046381fd7a6c68d195 284 SUPERFAMILY SSF51569 2 275 3.08E-70 T 14-10-2018 PACID_08260 a48b8054b10d8e046381fd7a6c68d195 284 Gene3D G3DSA:3.20.20.70 1 283 1.1E-78 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_08260 a48b8054b10d8e046381fd7a6c68d195 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 276 2.5E-77 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PACID_08260 a48b8054b10d8e046381fd7a6c68d195 284 PIRSF PIRSF001359 1 283 1.7E-62 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 PACID_12380 ec65a300df73a8f35ac40d043cb9f8da 604 Gene3D G3DSA:3.40.1440.10 212 314 6.1E-19 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PACID_12380 ec65a300df73a8f35ac40d043cb9f8da 604 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 22 187 1.7E-27 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_12380 ec65a300df73a8f35ac40d043cb9f8da 604 SUPERFAMILY SSF82771 239 309 1.18E-9 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 PACID_12380 ec65a300df73a8f35ac40d043cb9f8da 604 Gene3D G3DSA:3.30.420.10 21 190 9.6E-47 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_12380 ec65a300df73a8f35ac40d043cb9f8da 604 SUPERFAMILY SSF53098 16 194 1.96E-48 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_12380 ec65a300df73a8f35ac40d043cb9f8da 604 Pfam PF00929 Exonuclease 27 181 1.8E-31 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PACID_12380 ec65a300df73a8f35ac40d043cb9f8da 604 SMART SM00465 224 311 2.7E-6 T 14-10-2018 IPR000305 GIY-YIG endonuclease PACID_12380 ec65a300df73a8f35ac40d043cb9f8da 604 SMART SM00479 24 191 4.1E-37 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PACID_28470 af156f8bbc02bcd495ba4784b2448ca1 270 Gene3D G3DSA:3.20.20.20 1 269 1.9E-98 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_28470 af156f8bbc02bcd495ba4784b2448ca1 270 Pfam PF00809 Pterin binding enzyme 1 252 5.8E-81 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_28470 af156f8bbc02bcd495ba4784b2448ca1 270 SUPERFAMILY SSF51717 1 266 1.44E-85 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_28470 af156f8bbc02bcd495ba4784b2448ca1 270 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 1 264 1.7E-84 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PACID_28470 af156f8bbc02bcd495ba4784b2448ca1 270 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 34 47 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_11090 518f822338cd41577555d673f7035b10 207 Gene3D G3DSA:3.40.50.1000 3 177 3.3E-27 T 14-10-2018 IPR023214 HAD superfamily PACID_11090 518f822338cd41577555d673f7035b10 207 Pfam PF13419 Haloacid dehalogenase-like hydrolase 3 175 2.0E-14 T 14-10-2018 PACID_11090 518f822338cd41577555d673f7035b10 207 Gene3D G3DSA:1.10.150.240 14 82 3.3E-27 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PACID_11090 518f822338cd41577555d673f7035b10 207 SUPERFAMILY SSF56784 3 207 1.57E-33 T 14-10-2018 IPR036412 HAD-like superfamily PACID_11090 518f822338cd41577555d673f7035b10 207 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 178 7.4E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PACID_11090 518f822338cd41577555d673f7035b10 207 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 103 173 4.2E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.2E-35 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 9.2E-35 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 9.2E-35 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 9.2E-35 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 9.2E-35 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 SUPERFAMILY SSF55424 346 468 1.58E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PIRSF PIRSF000350 3 463 9.7E-77 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 Gene3D G3DSA:3.50.50.60 7 335 2.9E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 41 51 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 6 468 3.2E-164 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 330 1.0E-65 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 433 453 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 40 55 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 346 367 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 411 426 2.9E-59 T 14-10-2018 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 350 458 7.7E-32 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 SUPERFAMILY SSF51905 3 339 4.0E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 Gene3D G3DSA:3.50.50.60 151 273 2.9E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_16890 1aa582b0435f1dd418fd8d6becf414ee 469 Gene3D G3DSA:3.30.390.30 348 469 4.0E-40 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 PACID_22880 e9ccc190df6b3fa942be7a745bbf8b38 398 Gene3D G3DSA:3.30.950.30 15 152 3.7E-11 T 14-10-2018 IPR038461 Schlafen, AAA domain superfamily PACID_22880 e9ccc190df6b3fa942be7a745bbf8b38 398 Pfam PF04326 Putative DNA-binding domain 32 153 1.1E-6 T 14-10-2018 IPR007421 Schlafen, AAA domain GO:0005524 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 ProSitePatterns PS00480 Citrate synthase signature. 302 314 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 Gene3D G3DSA:1.10.230.10 266 375 5.7E-135 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 SUPERFAMILY SSF48256 3 424 2.62E-146 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 13 420 5.9E-153 T 14-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 PRINTS PR00143 Citrate synthase signature 239 267 1.2E-51 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 PRINTS PR00143 Citrate synthase signature 358 374 1.2E-51 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 PRINTS PR00143 Citrate synthase signature 295 315 1.2E-51 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 PRINTS PR00143 Citrate synthase signature 217 232 1.2E-51 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 PRINTS PR00143 Citrate synthase signature 163 176 1.2E-51 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 PRINTS PR00143 Citrate synthase signature 378 392 1.2E-51 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 Pfam PF00285 Citrate synthase, C-terminal domain 48 409 7.7E-131 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 Gene3D G3DSA:1.10.580.10 56 409 5.7E-135 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 PACID_33270 7d92e7562e77cb24174436e1f2bf91f8 427 PIRSF PIRSF001369 37 427 4.6E-146 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type PACID_12580 17da05af5e02c57bc10d60918602662f 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 183 342 2.1E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_12580 17da05af5e02c57bc10d60918602662f 362 Gene3D G3DSA:1.10.3720.10 158 350 4.9E-23 T 14-10-2018 IPR035906 MetI-like superfamily PACID_12580 17da05af5e02c57bc10d60918602662f 362 SUPERFAMILY SSF161098 160 338 2.62E-28 T 14-10-2018 IPR035906 MetI-like superfamily PACID_01120 3a17b63d3cd0e9ad1d0b22af687ed9f8 337 SUPERFAMILY SSF161098 80 317 1.96E-48 T 14-10-2018 IPR035906 MetI-like superfamily PACID_01120 3a17b63d3cd0e9ad1d0b22af687ed9f8 337 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 138 326 4.2E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_01120 3a17b63d3cd0e9ad1d0b22af687ed9f8 337 Gene3D G3DSA:1.10.3720.10 76 329 3.5E-59 T 14-10-2018 IPR035906 MetI-like superfamily PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 PIRSF PIRSF006356 1 403 1.4E-126 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 Gene3D G3DSA:1.10.3930.10 70 154 4.5E-135 T 14-10-2018 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 Gene3D G3DSA:3.75.10.10 8 400 4.5E-135 T 14-10-2018 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 Hamap MF_00242 Arginine deiminase [arcA]. 3 403 40.588 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 SUPERFAMILY SSF55909 7 403 1.37E-114 T 14-10-2018 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 PRINTS PR01466 Bacterial arginine deiminase signature 155 173 8.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 PRINTS PR01466 Bacterial arginine deiminase signature 359 373 8.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 PRINTS PR01466 Bacterial arginine deiminase signature 183 198 8.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 PRINTS PR01466 Bacterial arginine deiminase signature 4 24 8.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 PRINTS PR01466 Bacterial arginine deiminase signature 339 356 8.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 PRINTS PR01466 Bacterial arginine deiminase signature 382 400 8.0E-47 T 14-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 PACID_24220 d230e3ecfe4489b9016d6082bd2d1c5c 421 Pfam PF02274 Amidinotransferase 20 400 1.1E-94 T 14-10-2018 PACID_04450 e009ec4ec943fd0e09edf9cf3863a3b8 257 SUPERFAMILY SSF53474 1 244 2.4E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_04450 e009ec4ec943fd0e09edf9cf3863a3b8 257 Pfam PF12697 Alpha/beta hydrolase family 37 247 8.3E-12 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_04450 e009ec4ec943fd0e09edf9cf3863a3b8 257 Gene3D G3DSA:3.40.50.1820 1 256 1.0E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_31400 ceaa7fd834166ba5243016ff350c444b 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 1.9E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_31400 ceaa7fd834166ba5243016ff350c444b 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 63 78 1.9E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_31400 ceaa7fd834166ba5243016ff350c444b 107 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 48 63 1.9E-7 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_31400 ceaa7fd834166ba5243016ff350c444b 107 SMART SM00418 13 100 7.7E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_31400 ceaa7fd834166ba5243016ff350c444b 107 Pfam PF12840 Helix-turn-helix domain 12 72 6.9E-17 T 14-10-2018 PACID_31400 ceaa7fd834166ba5243016ff350c444b 107 Gene3D G3DSA:1.10.10.10 9 107 6.6E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_31400 ceaa7fd834166ba5243016ff350c444b 107 SUPERFAMILY SSF46785 9 102 1.71E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_24240 eeea13703201bc18d79512a0613d324a 366 Pfam PF06224 Winged helix DNA-binding domain 47 363 3.1E-41 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 PACID_27730 e0ec6e58aefe131e6d01a573bc052d68 252 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 172 212 5.4E-14 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria PACID_30090 8ab407b76b1bab87f347a4a15801b4e7 252 Pfam PF03649 Uncharacterised protein family (UPF0014) 8 239 7.7E-54 T 14-10-2018 IPR005226 UPF0014 family PACID_23270 508863a4a54dbf5b22f2f3ac77b130ff 204 SMART SM00479 1 175 1.7E-22 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PACID_23270 508863a4a54dbf5b22f2f3ac77b130ff 204 SUPERFAMILY SSF53098 2 173 2.83E-40 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_23270 508863a4a54dbf5b22f2f3ac77b130ff 204 Gene3D G3DSA:3.30.420.10 1 176 2.7E-64 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_23270 508863a4a54dbf5b22f2f3ac77b130ff 204 Pfam PF00929 Exonuclease 3 165 5.6E-27 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PACID_16120 d2b4cff9c54a3b4c10d0533f42b48754 447 Gene3D G3DSA:1.20.1250.20 253 447 3.0E-19 T 14-10-2018 PACID_16120 d2b4cff9c54a3b4c10d0533f42b48754 447 Pfam PF11700 Vacuole effluxer Atg22 like 160 408 3.1E-29 T 14-10-2018 IPR024671 Autophagy-related protein 22-like PACID_16120 d2b4cff9c54a3b4c10d0533f42b48754 447 Gene3D G3DSA:1.20.1250.20 6 226 1.1E-10 T 14-10-2018 PACID_16120 d2b4cff9c54a3b4c10d0533f42b48754 447 SUPERFAMILY SSF103473 10 441 1.31E-37 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_18860 4a4692ea78a59653c5c0740d322b7cb0 200 Pfam PF03596 Cadmium resistance transporter 14 197 8.9E-30 T 14-10-2018 IPR004676 Cadmium resistance transporter PACID_26880 e3ba612dda8c39178f2d459cdeae6fa6 265 Gene3D G3DSA:3.40.50.1820 15 248 1.6E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_26880 e3ba612dda8c39178f2d459cdeae6fa6 265 SUPERFAMILY SSF53474 18 238 5.78E-25 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_26880 e3ba612dda8c39178f2d459cdeae6fa6 265 Pfam PF00561 alpha/beta hydrolase fold 23 144 9.8E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_11400 2433214b3f439947467cc326d1ffdbcb 566 Gene3D G3DSA:1.25.40.340 361 564 1.6E-50 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_11400 2433214b3f439947467cc326d1ffdbcb 566 Gene3D G3DSA:3.40.50.10440 13 182 8.2E-49 T 14-10-2018 PACID_11400 2433214b3f439947467cc326d1ffdbcb 566 Pfam PF02733 Dak1 domain 18 326 4.3E-105 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_11400 2433214b3f439947467cc326d1ffdbcb 566 SUPERFAMILY SSF101473 366 561 2.62E-46 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_11400 2433214b3f439947467cc326d1ffdbcb 566 Gene3D G3DSA:3.30.1180.20 183 331 3.4E-42 T 14-10-2018 PACID_11400 2433214b3f439947467cc326d1ffdbcb 566 SMART SM01120 390 563 5.2E-55 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_11400 2433214b3f439947467cc326d1ffdbcb 566 Pfam PF02734 DAK2 domain 391 561 1.4E-43 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 PACID_11400 2433214b3f439947467cc326d1ffdbcb 566 SUPERFAMILY SSF82549 13 329 1.67E-102 T 14-10-2018 PACID_09160 859a8fddf685c9c50f4c3555f4082801 261 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 228 1.6E-22 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 PACID_09160 859a8fddf685c9c50f4c3555f4082801 261 SUPERFAMILY SSF100950 1 250 1.88E-86 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_09160 859a8fddf685c9c50f4c3555f4082801 261 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 PACID_09160 859a8fddf685c9c50f4c3555f4082801 261 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 37.591 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 PACID_09160 859a8fddf685c9c50f4c3555f4082801 261 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 244 1.9E-74 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 PACID_09160 859a8fddf685c9c50f4c3555f4082801 261 Gene3D G3DSA:3.40.50.1360 1 257 3.1E-89 T 14-10-2018 PACID_06750 173ac7f44032071483b7609ac0b2dfbf 336 SUPERFAMILY SSF50129 15 171 4.57E-52 T 14-10-2018 IPR011032 GroES-like superfamily PACID_06750 173ac7f44032071483b7609ac0b2dfbf 336 TIGRFAM TIGR02822 adh_fam_2: zinc-binding alcohol dehydrogenase family protein 4 332 2.7E-151 T 14-10-2018 IPR014187 Alcohol dehydrogenase, zinc-binding type 2 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 PACID_06750 173ac7f44032071483b7609ac0b2dfbf 336 SUPERFAMILY SSF51735 144 300 3.0E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_06750 173ac7f44032071483b7609ac0b2dfbf 336 SMART SM00829 14 332 7.4E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_06750 173ac7f44032071483b7609ac0b2dfbf 336 Gene3D G3DSA:3.90.180.10 18 328 4.9E-89 T 14-10-2018 PACID_06750 173ac7f44032071483b7609ac0b2dfbf 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 138 5.3E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_06750 173ac7f44032071483b7609ac0b2dfbf 336 Gene3D G3DSA:3.40.50.720 153 283 4.9E-89 T 14-10-2018 PACID_16790 b0beb1cf171010371b3d82e0a48d4c1a 140 Gene3D G3DSA:3.30.160.20 7 137 3.1E-29 T 14-10-2018 PACID_16790 b0beb1cf171010371b3d82e0a48d4c1a 140 Pfam PF00472 RF-1 domain 10 134 2.3E-18 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 PACID_16790 b0beb1cf171010371b3d82e0a48d4c1a 140 SUPERFAMILY SSF110916 17 97 3.66E-6 T 14-10-2018 PACID_21600 95c59466b772de8f833ad6e84425a862 160 Pfam PF04073 Aminoacyl-tRNA editing domain 43 148 4.3E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PACID_21600 95c59466b772de8f833ad6e84425a862 160 Gene3D G3DSA:3.90.960.10 2 159 5.0E-27 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_21600 95c59466b772de8f833ad6e84425a862 160 SUPERFAMILY SSF55826 5 157 1.44E-27 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_17240 af064163c9e4b4d07e5ba2d5869a605e 222 Gene3D G3DSA:1.10.357.10 4 203 6.2E-16 T 14-10-2018 PACID_17240 af064163c9e4b4d07e5ba2d5869a605e 222 SUPERFAMILY SSF46689 8 67 4.99E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_17240 af064163c9e4b4d07e5ba2d5869a605e 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 51 6.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_21890 e5f16d1fd5bc55ab686a7a6f33e64030 170 Pfam PF11706 CGNR zinc finger 129 170 1.1E-15 T 14-10-2018 IPR021005 Zinc finger, CGNR PACID_21890 e5f16d1fd5bc55ab686a7a6f33e64030 170 Gene3D G3DSA:1.10.3300.10 2 170 6.7E-44 T 14-10-2018 IPR023286 ABATE domain superfamily PACID_21890 e5f16d1fd5bc55ab686a7a6f33e64030 170 SUPERFAMILY SSF160904 2 170 3.79E-41 T 14-10-2018 PACID_28030 a53388613422814aa5b88f174c326195 265 Gene3D G3DSA:1.10.3730.10 163 265 5.6E-36 T 14-10-2018 PACID_28030 a53388613422814aa5b88f174c326195 265 Gene3D G3DSA:3.40.50.720 1 162 6.6E-46 T 14-10-2018 PACID_28030 a53388613422814aa5b88f174c326195 265 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 160 262 1.0E-34 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PACID_28030 a53388613422814aa5b88f174c326195 265 SUPERFAMILY SSF51735 4 158 2.37E-29 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_28030 a53388613422814aa5b88f174c326195 265 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 97 1.4E-18 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal PACID_28030 a53388613422814aa5b88f174c326195 265 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PACID_28030 a53388613422814aa5b88f174c326195 265 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 264 25.549 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PACID_28030 a53388613422814aa5b88f174c326195 265 SUPERFAMILY SSF48179 159 264 6.29E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_28030 a53388613422814aa5b88f174c326195 265 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 262 5.9E-77 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PACID_28030 a53388613422814aa5b88f174c326195 265 PIRSF PIRSF000193 1 265 6.0E-73 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 PACID_15950 d55cf6ab7e818fdfc7cd7225d20d853e 251 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 246 2.2E-55 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PACID_15950 d55cf6ab7e818fdfc7cd7225d20d853e 251 Gene3D G3DSA:3.10.310.10 101 235 1.4E-71 T 14-10-2018 PACID_15950 d55cf6ab7e818fdfc7cd7225d20d853e 251 SUPERFAMILY SSF54506 116 245 3.0E-33 T 14-10-2018 PACID_15950 d55cf6ab7e818fdfc7cd7225d20d853e 251 SUPERFAMILY SSF54506 4 108 2.62E-24 T 14-10-2018 PACID_15950 d55cf6ab7e818fdfc7cd7225d20d853e 251 Gene3D G3DSA:3.10.310.10 3 239 1.4E-71 T 14-10-2018 PACID_15950 d55cf6ab7e818fdfc7cd7225d20d853e 251 Pfam PF01678 Diaminopimelate epimerase 127 238 1.2E-20 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PACID_15950 d55cf6ab7e818fdfc7cd7225d20d853e 251 Pfam PF01678 Diaminopimelate epimerase 4 107 4.3E-21 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 PACID_28740 f5f01912e2a96f91bda45c9f830b2600 186 Pfam PF03358 NADPH-dependent FMN reductase 1 148 5.5E-39 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PACID_28740 f5f01912e2a96f91bda45c9f830b2600 186 Gene3D G3DSA:3.40.50.360 1 186 1.5E-46 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PACID_28740 f5f01912e2a96f91bda45c9f830b2600 186 SUPERFAMILY SSF52218 1 178 4.97E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PACID_03420 7f3528ae87ae87bf736f65aa32f6a069 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 93 106 3.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_03420 7f3528ae87ae87bf736f65aa32f6a069 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_03420 7f3528ae87ae87bf736f65aa32f6a069 260 PRINTS PR00111 Alpha/beta hydrolase fold signature 209 223 3.6E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_03420 7f3528ae87ae87bf736f65aa32f6a069 260 Pfam PF12697 Alpha/beta hydrolase family 26 249 2.4E-10 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_03420 7f3528ae87ae87bf736f65aa32f6a069 260 Gene3D G3DSA:3.40.50.1820 1 256 5.2E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_03420 7f3528ae87ae87bf736f65aa32f6a069 260 SUPERFAMILY SSF53474 4 258 5.55E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_31190 ee17ceeb9c03650d55bb182ec5556e00 1289 Gene3D G3DSA:2.60.40.10 1098 1193 6.0E-19 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_31190 ee17ceeb9c03650d55bb182ec5556e00 1289 Gene3D G3DSA:2.60.40.10 1196 1287 2.4E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_31190 ee17ceeb9c03650d55bb182ec5556e00 1289 SUPERFAMILY SSF81296 1108 1195 3.78E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set PACID_31190 ee17ceeb9c03650d55bb182ec5556e00 1289 Pfam PF08329 Chitinase A, N-terminal domain 1215 1288 2.6E-5 T 14-10-2018 IPR013540 Chitinase A N-terminal GO:0004568|GO:0006032 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 PACID_31190 ee17ceeb9c03650d55bb182ec5556e00 1289 SUPERFAMILY SSF81296 1198 1288 2.8E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set PACID_31190 ee17ceeb9c03650d55bb182ec5556e00 1289 Gene3D G3DSA:2.60.120.260 43 203 5.4E-27 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_17490 5ad77329240e7887c18875c0891034e3 364 Gene3D G3DSA:1.10.3660.10 184 282 2.3E-24 T 14-10-2018 PACID_17490 5ad77329240e7887c18875c0891034e3 364 SUPERFAMILY SSF48179 181 278 1.36E-22 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_17490 5ad77329240e7887c18875c0891034e3 364 Pfam PF02153 Prephenate dehydrogenase 33 268 2.7E-47 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 PACID_17490 5ad77329240e7887c18875c0891034e3 364 Gene3D G3DSA:3.40.50.720 17 183 1.8E-40 T 14-10-2018 PACID_17490 5ad77329240e7887c18875c0891034e3 364 SUPERFAMILY SSF51735 18 177 2.73E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_17490 5ad77329240e7887c18875c0891034e3 364 SUPERFAMILY SSF55021 294 357 6.22E-5 T 14-10-2018 PACID_04730 4ad750e71316e1e0aee66248f3f42c04 330 Gene3D G3DSA:3.30.360.10 124 280 6.3E-61 T 14-10-2018 PACID_04730 4ad750e71316e1e0aee66248f3f42c04 330 SUPERFAMILY SSF51735 4 145 2.39E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_04730 4ad750e71316e1e0aee66248f3f42c04 330 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 131 243 3.3E-4 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_04730 4ad750e71316e1e0aee66248f3f42c04 330 SUPERFAMILY SSF55347 124 291 1.61E-18 T 14-10-2018 PACID_04730 4ad750e71316e1e0aee66248f3f42c04 330 Gene3D G3DSA:3.40.50.720 5 313 6.3E-61 T 14-10-2018 PACID_04730 4ad750e71316e1e0aee66248f3f42c04 330 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 4.0E-16 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_08290 d63b9a8c3273b03e0db15f496aa71928 260 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 5 229 38.963 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PACID_08290 d63b9a8c3273b03e0db15f496aa71928 260 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 106 113 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PACID_08290 d63b9a8c3273b03e0db15f496aa71928 260 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 7 228 7.1E-62 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PACID_08290 d63b9a8c3273b03e0db15f496aa71928 260 Gene3D G3DSA:3.90.550.10 2 234 2.1E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_08290 d63b9a8c3273b03e0db15f496aa71928 260 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 230 1.6E-55 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 PACID_08290 d63b9a8c3273b03e0db15f496aa71928 260 SUPERFAMILY SSF53448 6 229 1.19E-48 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_27860 6a4bc0a6a24c25938e7688f0194c63f2 642 SUPERFAMILY SSF52016 434 626 6.28E-57 T 14-10-2018 PACID_27860 6a4bc0a6a24c25938e7688f0194c63f2 642 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 130 140 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PACID_27860 6a4bc0a6a24c25938e7688f0194c63f2 642 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 26 624 2.0E-239 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PACID_27860 6a4bc0a6a24c25938e7688f0194c63f2 642 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 12 624 42.997 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PACID_27860 6a4bc0a6a24c25938e7688f0194c63f2 642 Gene3D G3DSA:3.50.30.80 434 585 1.5E-52 T 14-10-2018 PACID_27860 6a4bc0a6a24c25938e7688f0194c63f2 642 Pfam PF00920 Dehydratase family 42 620 1.2E-207 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PACID_27860 6a4bc0a6a24c25938e7688f0194c63f2 642 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 522 533 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PACID_27860 6a4bc0a6a24c25938e7688f0194c63f2 642 SUPERFAMILY SSF143975 11 433 4.45E-125 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 PACID_24110 2ae82a966491d80b58e7922740437f01 348 Pfam PF13641 Glycosyltransferase like family 2 7 228 4.5E-22 T 14-10-2018 PACID_24110 2ae82a966491d80b58e7922740437f01 348 SUPERFAMILY SSF53448 6 248 1.48E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_24110 2ae82a966491d80b58e7922740437f01 348 Gene3D G3DSA:3.90.550.10 2 223 8.2E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_26480 534f799cd4d539c21b5bcde02239eeb1 214 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 8 200 3.2E-39 T 14-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 PACID_26480 534f799cd4d539c21b5bcde02239eeb1 214 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_26480 534f799cd4d539c21b5bcde02239eeb1 214 Gene3D G3DSA:3.40.50.300 1 213 3.3E-56 T 14-10-2018 PACID_26480 534f799cd4d539c21b5bcde02239eeb1 214 SUPERFAMILY SSF52540 6 211 2.97E-52 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_26480 534f799cd4d539c21b5bcde02239eeb1 214 SMART SM00382 32 213 3.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_26480 534f799cd4d539c21b5bcde02239eeb1 214 Pfam PF00005 ABC transporter 24 164 1.1E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_14950 35e209c8c6e299a16f937a99a25fa1aa 424 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 262 376 3.4E-29 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal PACID_14950 35e209c8c6e299a16f937a99a25fa1aa 424 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 254 2.8E-50 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal PACID_14950 35e209c8c6e299a16f937a99a25fa1aa 424 Gene3D G3DSA:3.40.47.10 264 409 1.1E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_14950 35e209c8c6e299a16f937a99a25fa1aa 424 SUPERFAMILY SSF53901 221 420 8.24E-57 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_14950 35e209c8c6e299a16f937a99a25fa1aa 424 SMART SM00825 Beta-ketoacyl synthase 4 411 8.8E-13 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain PACID_14950 35e209c8c6e299a16f937a99a25fa1aa 424 Gene3D G3DSA:3.40.47.10 1 263 4.5E-73 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_14950 35e209c8c6e299a16f937a99a25fa1aa 424 SUPERFAMILY SSF53901 1 259 6.81E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_31460 957ec3053a480b1f723a69aef7220b08 316 Gene3D G3DSA:3.40.91.100 148 312 1.1E-7 T 14-10-2018 PACID_31460 957ec3053a480b1f723a69aef7220b08 316 Pfam PF14338 Mrr N-terminal domain 7 89 2.2E-26 T 14-10-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain PACID_31460 957ec3053a480b1f723a69aef7220b08 316 SUPERFAMILY SSF52980 175 294 1.29E-15 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_31460 957ec3053a480b1f723a69aef7220b08 316 Pfam PF04471 Restriction endonuclease 173 291 4.3E-31 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 PACID_22160 9e61da8568cc633fd59f6f548be394a1 345 SUPERFAMILY SSF51004 13 323 3.14E-20 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily PACID_22160 9e61da8568cc633fd59f6f548be394a1 345 Gene3D G3DSA:2.130.10.10 7 330 3.3E-48 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PACID_22160 9e61da8568cc633fd59f6f548be394a1 345 Pfam PF10282 Lactonase, 7-bladed beta-propeller 12 318 9.9E-43 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller PACID_00090 51936b6adb0d2fee680325c3cb543b04 304 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 7 284 2.8E-16 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 PACID_00090 51936b6adb0d2fee680325c3cb543b04 304 Gene3D G3DSA:3.30.420.40 5 107 3.5E-51 T 14-10-2018 PACID_00090 51936b6adb0d2fee680325c3cb543b04 304 SUPERFAMILY SSF53067 107 288 3.89E-40 T 14-10-2018 PACID_00090 51936b6adb0d2fee680325c3cb543b04 304 Gene3D G3DSA:3.30.420.40 108 250 3.5E-51 T 14-10-2018 PACID_28420 735fe3dcfca45091d09aa3931a8b0ec4 384 Gene3D G3DSA:1.10.645.20 24 384 1.2E-88 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_28420 735fe3dcfca45091d09aa3931a8b0ec4 384 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 60 71 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_28420 735fe3dcfca45091d09aa3931a8b0ec4 384 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 310 384 3.9E-14 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_28420 735fe3dcfca45091d09aa3931a8b0ec4 384 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 157 301 3.4E-23 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_28420 735fe3dcfca45091d09aa3931a8b0ec4 384 SUPERFAMILY SSF56762 37 383 1.44E-68 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 14-10-2018 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 SMART SM00354 12 82 1.8E-22 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 Pfam PF13377 Periplasmic binding protein-like domain 189 346 1.1E-35 T 14-10-2018 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 Gene3D G3DSA:1.10.260.40 7 65 4.4E-21 T 14-10-2018 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 Gene3D G3DSA:3.40.50.2300 180 307 7.3E-66 T 14-10-2018 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 SUPERFAMILY SSF53822 73 344 2.19E-56 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 9.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 24 34 9.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 2.1E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 SUPERFAMILY SSF47413 13 69 1.42E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_18190 1add7faa9eb1560e8b95a352a83bc9c0 347 Gene3D G3DSA:3.40.50.2300 66 324 7.3E-66 T 14-10-2018 PACID_20080 344ef2636eba6df15886a6b13c9d6005 1075 Pfam PF12705 PD-(D/E)XK nuclease superfamily 899 1034 1.2E-4 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type PACID_20080 344ef2636eba6df15886a6b13c9d6005 1075 Pfam PF00580 UvrD/REP helicase N-terminal domain 18 325 3.9E-45 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 PACID_20080 344ef2636eba6df15886a6b13c9d6005 1075 Gene3D G3DSA:3.40.50.300 396 491 3.0E-15 T 14-10-2018 PACID_20080 344ef2636eba6df15886a6b13c9d6005 1075 Pfam PF13361 UvrD-like helicase C-terminal domain 342 502 6.0E-10 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_20080 344ef2636eba6df15886a6b13c9d6005 1075 SUPERFAMILY SSF52540 14 749 2.26E-101 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20080 344ef2636eba6df15886a6b13c9d6005 1075 Gene3D G3DSA:3.40.50.300 9 161 2.0E-28 T 14-10-2018 PACID_20080 344ef2636eba6df15886a6b13c9d6005 1075 Pfam PF13361 UvrD-like helicase C-terminal domain 642 745 8.6E-16 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 PACID_20080 344ef2636eba6df15886a6b13c9d6005 1075 Gene3D G3DSA:3.40.50.300 214 361 2.1E-29 T 14-10-2018 PACID_26380 3d343adba7a8d65e6388f042f0853415 442 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 30 442 44.173 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26380 3d343adba7a8d65e6388f042f0853415 442 Gene3D G3DSA:1.10.645.20 36 442 1.4E-150 T 14-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26380 3d343adba7a8d65e6388f042f0853415 442 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 154 442 6.1E-98 T 14-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26380 3d343adba7a8d65e6388f042f0853415 442 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 37 442 8.0E-156 T 14-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26380 3d343adba7a8d65e6388f042f0853415 442 SUPERFAMILY SSF56762 47 442 1.83E-109 T 14-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26380 3d343adba7a8d65e6388f042f0853415 442 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 74 85 - T 14-10-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_14000 787fc8b383e8ea8598c544538648b760 379 Gene3D G3DSA:3.20.20.70 6 365 1.6E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_14000 787fc8b383e8ea8598c544538648b760 379 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 9 230 1.5E-50 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PACID_14000 787fc8b383e8ea8598c544538648b760 379 SUPERFAMILY SSF51395 7 357 3.1E-88 T 14-10-2018 PACID_15130 e4189230bfb9ca48b9d42c79a83ea813 216 Gene3D G3DSA:3.40.50.2020 2 216 1.0E-61 T 14-10-2018 PACID_15130 e4189230bfb9ca48b9d42c79a83ea813 216 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 216 30.417 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_15130 e4189230bfb9ca48b9d42c79a83ea813 216 SUPERFAMILY SSF53271 18 214 1.57E-50 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_15130 e4189230bfb9ca48b9d42c79a83ea813 216 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 18 181 3.7E-44 T 14-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 PACID_15130 e4189230bfb9ca48b9d42c79a83ea813 216 Pfam PF00156 Phosphoribosyl transferase domain 49 192 1.1E-17 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PACID_07490 bbfec7048dca29e9081af4f9bc1675ce 85 Pfam PF01402 Ribbon-helix-helix protein, copG family 49 77 2.0E-4 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_07490 bbfec7048dca29e9081af4f9bc1675ce 85 Gene3D G3DSA:1.10.1220.60 34 83 1.3E-5 T 14-10-2018 PACID_01110 cd8b7bc58e31c9adcce949d03a800e98 468 Gene3D G3DSA:3.40.190.10 177 441 3.0E-38 T 14-10-2018 PACID_01110 cd8b7bc58e31c9adcce949d03a800e98 468 Pfam PF01547 Bacterial extracellular solute-binding protein 78 372 1.5E-20 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_01110 cd8b7bc58e31c9adcce949d03a800e98 468 Gene3D G3DSA:3.40.190.10 92 414 3.0E-38 T 14-10-2018 PACID_01110 cd8b7bc58e31c9adcce949d03a800e98 468 TIGRFAM TIGR03851 chitin_NgcE: carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein 21 465 3.6E-173 T 14-10-2018 IPR022386 Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein PACID_01110 cd8b7bc58e31c9adcce949d03a800e98 468 SUPERFAMILY SSF53850 58 457 1.6E-35 T 14-10-2018 PACID_07660 538b2c6bde9087ba2b3bdd236cfbcf64 133 Gene3D G3DSA:1.10.10.10 5 126 7.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_07660 538b2c6bde9087ba2b3bdd236cfbcf64 133 SMART SM00345 12 71 5.0E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_07660 538b2c6bde9087ba2b3bdd236cfbcf64 133 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 71 3.0E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_07660 538b2c6bde9087ba2b3bdd236cfbcf64 133 SUPERFAMILY SSF46785 4 75 1.03E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_22170 19059eff0c318432e4d323e89739e545 200 PRINTS PR01576 Peptide deformylase signature 113 124 1.3E-27 T 14-10-2018 IPR023635 Peptide deformylase PACID_22170 19059eff0c318432e4d323e89739e545 200 PRINTS PR01576 Peptide deformylase signature 144 173 1.3E-27 T 14-10-2018 IPR023635 Peptide deformylase PACID_22170 19059eff0c318432e4d323e89739e545 200 PRINTS PR01576 Peptide deformylase signature 125 143 1.3E-27 T 14-10-2018 IPR023635 Peptide deformylase PACID_22170 19059eff0c318432e4d323e89739e545 200 PRINTS PR01576 Peptide deformylase signature 51 80 1.3E-27 T 14-10-2018 IPR023635 Peptide deformylase PACID_22170 19059eff0c318432e4d323e89739e545 200 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 23 182 2.5E-36 T 14-10-2018 IPR023635 Peptide deformylase PACID_22170 19059eff0c318432e4d323e89739e545 200 PIRSF PIRSF004749 14 196 3.4E-41 T 14-10-2018 IPR023635 Peptide deformylase PACID_22170 19059eff0c318432e4d323e89739e545 200 Pfam PF01327 Polypeptide deformylase 22 176 1.0E-40 T 14-10-2018 IPR023635 Peptide deformylase PACID_22170 19059eff0c318432e4d323e89739e545 200 Gene3D G3DSA:3.90.45.10 20 196 6.7E-50 T 14-10-2018 IPR036821 Peptide deformylase superfamily PACID_22170 19059eff0c318432e4d323e89739e545 200 SUPERFAMILY SSF56420 20 183 2.62E-51 T 14-10-2018 IPR036821 Peptide deformylase superfamily PACID_22170 19059eff0c318432e4d323e89739e545 200 Hamap MF_00163 Peptide deformylase [def]. 20 186 26.03 T 14-10-2018 IPR023635 Peptide deformylase PACID_01150 e953d48d8d95c00203cdc37cfd29eaaa 527 Pfam PF13552 Protein of unknown function (DUF4127) 5 523 9.4E-145 T 14-10-2018 IPR025394 Protein of unknown function DUF4127 PACID_21020 c4d4772e1268464d77e59c38d7442c81 319 SUPERFAMILY SSF51430 1 312 7.07E-87 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_21020 c4d4772e1268464d77e59c38d7442c81 319 Gene3D G3DSA:3.20.20.100 1 316 2.7E-96 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_21020 c4d4772e1268464d77e59c38d7442c81 319 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 135 152 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PACID_21020 c4d4772e1268464d77e59c38d7442c81 319 Pfam PF00248 Aldo/keto reductase family 16 311 4.9E-61 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_21590 688da6901b4d4bed37c34f66ec4b3b9a 139 Gene3D G3DSA:2.30.110.10 1 139 5.8E-44 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PACID_21590 688da6901b4d4bed37c34f66ec4b3b9a 139 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 13 129 4.5E-30 T 14-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related PACID_21590 688da6901b4d4bed37c34f66ec4b3b9a 139 SUPERFAMILY SSF50475 11 131 3.55E-31 T 14-10-2018 PACID_33890 3c460c41add8f527aafee6bc947b24fd 107 PIRSF PIRSF000077 1 107 7.8E-31 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 PACID_33890 3c460c41add8f527aafee6bc947b24fd 107 Gene3D G3DSA:3.40.30.10 1 106 1.8E-30 T 14-10-2018 PACID_33890 3c460c41add8f527aafee6bc947b24fd 107 Pfam PF00085 Thioredoxin 4 104 2.5E-28 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 PACID_33890 3c460c41add8f527aafee6bc947b24fd 107 SUPERFAMILY SSF52833 2 105 1.09E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_33890 3c460c41add8f527aafee6bc947b24fd 107 PRINTS PR00421 Thioredoxin family signature 23 31 1.1E-5 T 14-10-2018 PACID_33890 3c460c41add8f527aafee6bc947b24fd 107 PRINTS PR00421 Thioredoxin family signature 71 82 1.1E-5 T 14-10-2018 PACID_33890 3c460c41add8f527aafee6bc947b24fd 107 PRINTS PR00421 Thioredoxin family signature 31 40 1.1E-5 T 14-10-2018 PACID_33890 3c460c41add8f527aafee6bc947b24fd 107 ProSitePatterns PS00194 Thioredoxin family active site. 24 42 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 PACID_15780 1f5f1f15e4655c6cb3c26aa4271250fc 61 Pfam PF12728 Helix-turn-helix domain 10 57 1.1E-9 T 14-10-2018 PACID_15780 1f5f1f15e4655c6cb3c26aa4271250fc 61 Gene3D G3DSA:1.10.1660.10 7 58 3.3E-5 T 14-10-2018 PACID_10990 837293cbf5fe15ea719568584c1e073b 193 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 35 192 34.786 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 PACID_10990 837293cbf5fe15ea719568584c1e073b 193 SUPERFAMILY SSF46767 114 191 1.02E-26 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 PACID_10990 837293cbf5fe15ea719568584c1e073b 193 Gene3D G3DSA:1.10.10.10 110 193 1.1E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_10990 837293cbf5fe15ea719568584c1e073b 193 Gene3D G3DSA:3.30.160.70 31 107 3.2E-16 T 14-10-2018 PACID_10990 837293cbf5fe15ea719568584c1e073b 193 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 162 168 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PACID_10990 837293cbf5fe15ea719568584c1e073b 193 SUPERFAMILY SSF53155 31 107 1.8E-15 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PACID_10990 837293cbf5fe15ea719568584c1e073b 193 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 114 191 3.9E-29 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PACID_10990 837293cbf5fe15ea719568584c1e073b 193 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 114 192 1.3E-27 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 PACID_10990 837293cbf5fe15ea719568584c1e073b 193 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 32 107 8.4E-7 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 Pfam PF13541 Subunit ChlI of Mg-chelatase 364 425 3.9E-8 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 3.3E-153 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 SUPERFAMILY SSF52540 67 285 4.5E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 Gene3D G3DSA:3.30.230.10 292 465 1.5E-15 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 SMART SM00382 85 239 1.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 Hamap MF_01498 DNA repair protein RadA [radA]. 22 455 41.91 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 PRINTS PR01874 DNA repair protein radA signature 11 35 5.0E-81 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 PRINTS PR01874 DNA repair protein radA signature 208 236 5.0E-81 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 PRINTS PR01874 DNA repair protein radA signature 169 193 5.0E-81 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 PRINTS PR01874 DNA repair protein radA signature 77 105 5.0E-81 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 PRINTS PR01874 DNA repair protein radA signature 243 269 5.0E-81 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 PRINTS PR01874 DNA repair protein radA signature 318 341 5.0E-81 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 PRINTS PR01874 DNA repair protein radA signature 119 136 5.0E-81 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 Gene3D G3DSA:3.40.50.300 60 274 1.9E-39 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 Pfam PF13481 AAA domain 77 217 2.3E-15 T 14-10-2018 PACID_28100 dd09bd7dd0d5a7b37789ef16e575efdc 481 SUPERFAMILY SSF54211 288 454 5.69E-35 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_13180 2b178a28f0f74403d202c0f26bb7b7a1 328 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 104 4.9E-21 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain PACID_13180 2b178a28f0f74403d202c0f26bb7b7a1 328 Gene3D G3DSA:1.10.10.10 216 308 1.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_13180 2b178a28f0f74403d202c0f26bb7b7a1 328 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 29.052 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 PACID_13180 2b178a28f0f74403d202c0f26bb7b7a1 328 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 2.2E-92 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like PACID_13180 2b178a28f0f74403d202c0f26bb7b7a1 328 Gene3D G3DSA:3.10.28.10 1 213 1.0E-17 T 14-10-2018 IPR027434 Homing endonuclease PACID_13180 2b178a28f0f74403d202c0f26bb7b7a1 328 Pfam PF02650 WhiA C-terminal HTH domain 221 303 5.2E-18 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal PACID_13180 2b178a28f0f74403d202c0f26bb7b7a1 328 Pfam PF14527 WhiA LAGLIDADG-like domain 127 218 2.1E-24 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain PACID_34080 1a39de94013224ffe6c67aaea3e239f5 364 Pfam PF00083 Sugar (and other) transporter 2 357 7.7E-49 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_34080 1a39de94013224ffe6c67aaea3e239f5 364 SUPERFAMILY SSF103473 50 356 6.67E-28 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_05520 25089d18a2b2adf5140b15c58a5e2cd9 436 Gene3D G3DSA:1.10.10.660 57 122 5.7E-66 T 14-10-2018 IPR024033 Uncharacterised domain superfamily, YlbE PACID_05520 25089d18a2b2adf5140b15c58a5e2cd9 436 Pfam PF06545 Protein of unknown function (DUF1116) 102 317 3.8E-92 T 14-10-2018 IPR009499 Protein of unknown function DUF1116 PACID_05520 25089d18a2b2adf5140b15c58a5e2cd9 436 Gene3D G3DSA:3.90.1700.10 265 431 3.8E-70 T 14-10-2018 PACID_05520 25089d18a2b2adf5140b15c58a5e2cd9 436 Gene3D G3DSA:3.90.1710.10 123 257 5.7E-66 T 14-10-2018 PACID_13950 e836a71241c6a20a734ca9960b522b30 629 ProSitePatterns PS00455 Putative AMP-binding domain signature. 258 269 - T 14-10-2018 IPR020845 AMP-binding, conserved site PACID_13950 e836a71241c6a20a734ca9960b522b30 629 Pfam PF00501 AMP-binding enzyme 86 519 1.8E-99 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PACID_13950 e836a71241c6a20a734ca9960b522b30 629 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 19 628 7.2E-251 T 14-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 PACID_13950 e836a71241c6a20a734ca9960b522b30 629 SUPERFAMILY SSF56801 16 619 7.46E-177 T 14-10-2018 PACID_13950 e836a71241c6a20a734ca9960b522b30 629 Pfam PF13193 AMP-binding enzyme C-terminal domain 527 605 5.0E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PACID_13950 e836a71241c6a20a734ca9960b522b30 629 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 27 77 1.2E-16 T 14-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 PACID_13950 e836a71241c6a20a734ca9960b522b30 629 Gene3D G3DSA:3.30.300.30 514 629 1.2E-29 T 14-10-2018 PACID_13950 e836a71241c6a20a734ca9960b522b30 629 Gene3D G3DSA:3.40.50.12780 50 511 3.2E-112 T 14-10-2018 PACID_19000 81915fa2100b319bb448a629a1d277de 99 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 19 90 1.1E-15 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PACID_19000 81915fa2100b319bb448a629a1d277de 99 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 5 95 2.6E-22 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PACID_19000 81915fa2100b319bb448a629a1d277de 99 Gene3D G3DSA:1.10.20.60 1 93 5.9E-21 T 14-10-2018 PACID_19000 81915fa2100b319bb448a629a1d277de 99 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 2 95 21.924 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 PACID_19000 81915fa2100b319bb448a629a1d277de 99 SUPERFAMILY SSF141000 3 93 4.97E-25 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 PACID_01340 70c2036be2021c030085940d9de87af1 342 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 311 2.1E-54 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 PACID_01340 70c2036be2021c030085940d9de87af1 342 Gene3D G3DSA:3.40.50.720 1 182 1.4E-42 T 14-10-2018 PACID_01340 70c2036be2021c030085940d9de87af1 342 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 146 4.8E-26 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain PACID_01340 70c2036be2021c030085940d9de87af1 342 Gene3D G3DSA:1.10.1040.10 183 316 5.3E-31 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_01340 70c2036be2021c030085940d9de87af1 342 SUPERFAMILY SSF51735 1 126 1.97E-13 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_01340 70c2036be2021c030085940d9de87af1 342 SUPERFAMILY SSF48179 183 310 1.63E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_01340 70c2036be2021c030085940d9de87af1 342 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 184 308 1.9E-24 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 195 280 6.3E-27 T 14-10-2018 IPR012997 Rare lipoprotein A PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 SUPERFAMILY SSF50685 178 280 1.81E-16 T 14-10-2018 IPR036908 RlpA-like domain superfamily PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 Pfam PF03330 Lytic transglycolase 194 277 4.6E-22 T 14-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 SMART SM00287 68 132 1.8E-6 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 Pfam PF08239 Bacterial SH3 domain 78 129 3.1E-9 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 Gene3D G3DSA:2.30.30.40 72 129 2.2E-13 T 14-10-2018 PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 9 280 19.18 T 14-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 ProDom PD068376 ORF2 SECRETED GLNII PRECURSOR SIGNAL 202 265 0.002 T 14-10-2018 PACID_01860 2c5b44c5c55f00e792e56f4fc60798fc 281 Gene3D G3DSA:2.40.40.10 191 281 4.2E-33 T 14-10-2018 IPR036908 RlpA-like domain superfamily PACID_16380 931b8832772ec0aabc14e9627c440112 285 PIRSF PIRSF028756 19 284 5.0E-69 T 14-10-2018 IPR016898 Polyphosphate kinase 2 KEGG: 00190+2.7.4.1 PACID_16380 931b8832772ec0aabc14e9627c440112 285 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 45 264 6.1E-65 T 14-10-2018 IPR022488 Polyphosphate kinase-2-related PACID_16380 931b8832772ec0aabc14e9627c440112 285 Gene3D G3DSA:3.40.50.300 9 285 1.2E-106 T 14-10-2018 PACID_16380 931b8832772ec0aabc14e9627c440112 285 SUPERFAMILY SSF52540 72 249 2.83E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_16380 931b8832772ec0aabc14e9627c440112 285 TIGRFAM TIGR03709 PPK2_rel_1: polyphosphate:nucleotide phosphotransferase, PPK2 family 17 278 1.5E-99 T 14-10-2018 IPR022300 Polyphosphate:nucleotide phosphotransferase, PPK2 GO:0006797|GO:0016776 KEGG: 00190+2.7.4.1 PACID_24200 a65817628a30478dce0590e4cb0dd8a2 216 Hamap MF_00528 Septum formation protein Maf [maf]. 10 202 25.765 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PACID_24200 a65817628a30478dce0590e4cb0dd8a2 216 Pfam PF02545 Maf-like protein 11 196 7.0E-43 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PACID_24200 a65817628a30478dce0590e4cb0dd8a2 216 Gene3D G3DSA:3.90.950.10 10 201 3.6E-55 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PACID_24200 a65817628a30478dce0590e4cb0dd8a2 216 PIRSF PIRSF006305 4 202 1.8E-37 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PACID_24200 a65817628a30478dce0590e4cb0dd8a2 216 TIGRFAM TIGR00172 maf: septum formation protein Maf 10 195 1.3E-41 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 PACID_24200 a65817628a30478dce0590e4cb0dd8a2 216 SUPERFAMILY SSF52972 9 197 1.37E-49 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PACID_19330 79d694ed0b8cb1f4630f3fc649d22065 167 Pfam PF10739 Protein of unknown function (DUF2550) 27 157 1.5E-33 T 14-10-2018 IPR019675 Protein of unknown function DUF2550 PACID_28270 d3ede2efef573137f504b1576550c41d 191 SUPERFAMILY SSF52540 28 177 1.74E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28270 d3ede2efef573137f504b1576550c41d 191 Gene3D G3DSA:3.40.50.300 9 186 1.0E-23 T 14-10-2018 PACID_30940 fb8f9476b29149da0032fd85e5384261 285 Gene3D G3DSA:3.30.1240.10 107 205 3.0E-49 T 14-10-2018 PACID_30940 fb8f9476b29149da0032fd85e5384261 285 ProSitePatterns PS01229 Hypothetical cof family signature 2. 230 252 - T 14-10-2018 PACID_30940 fb8f9476b29149da0032fd85e5384261 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 28 275 2.4E-40 T 14-10-2018 PACID_30940 fb8f9476b29149da0032fd85e5384261 285 Gene3D G3DSA:3.40.50.1000 26 274 3.0E-49 T 14-10-2018 IPR023214 HAD superfamily PACID_30940 fb8f9476b29149da0032fd85e5384261 285 SUPERFAMILY SSF56784 23 280 5.33E-49 T 14-10-2018 IPR036412 HAD-like superfamily PACID_09430 23b415e40b1ddc7a336ce28de4aa0d2a 198 Pfam PF08666 SAF domain 41 100 5.1E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PACID_09430 23b415e40b1ddc7a336ce28de4aa0d2a 198 SMART SM00858 39 101 1.7E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PACID_21980 a87fa4e2293cdaa6813522ea0e642c64 380 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 18 359 1.3E-125 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PACID_21980 a87fa4e2293cdaa6813522ea0e642c64 380 Pfam PF04551 GcpE protein 21 361 2.8E-130 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PACID_21980 a87fa4e2293cdaa6813522ea0e642c64 380 Gene3D G3DSA:3.20.20.20 12 271 7.6E-104 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_21980 a87fa4e2293cdaa6813522ea0e642c64 380 SUPERFAMILY SSF56014 277 360 3.92E-11 T 14-10-2018 PACID_21980 a87fa4e2293cdaa6813522ea0e642c64 380 Gene3D G3DSA:3.30.413.10 272 372 1.3E-34 T 14-10-2018 PACID_21980 a87fa4e2293cdaa6813522ea0e642c64 380 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 16 367 32.58 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PACID_21980 a87fa4e2293cdaa6813522ea0e642c64 380 SUPERFAMILY SSF51717 44 219 5.89E-9 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_21980 a87fa4e2293cdaa6813522ea0e642c64 380 PIRSF PIRSF004640 12 372 2.5E-144 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 PACID_24140 ece2baab2b9013347870c1223e617e44 428 SUPERFAMILY SSF52440 44 138 1.31E-26 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily PACID_24140 ece2baab2b9013347870c1223e617e44 428 Gene3D G3DSA:3.40.50.20 42 151 2.0E-33 T 14-10-2018 PACID_24140 ece2baab2b9013347870c1223e617e44 428 Gene3D G3DSA:3.30.470.20 218 427 3.1E-71 T 14-10-2018 PACID_24140 ece2baab2b9013347870c1223e617e44 428 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 46 413 2.3E-113 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PACID_24140 ece2baab2b9013347870c1223e617e44 428 Pfam PF02222 ATP-grasp domain 153 329 2.6E-47 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type PACID_24140 ece2baab2b9013347870c1223e617e44 428 SUPERFAMILY SSF51246 355 424 1.41E-14 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 PACID_24140 ece2baab2b9013347870c1223e617e44 428 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 46 408 39.197 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 PACID_24140 ece2baab2b9013347870c1223e617e44 428 Gene3D G3DSA:3.30.1490.20 154 217 3.8E-14 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 PACID_24140 ece2baab2b9013347870c1223e617e44 428 SUPERFAMILY SSF56059 143 349 1.26E-58 T 14-10-2018 PACID_08810 a612aad481ecd9d1ddfa2fc4c6ec21fb 253 SUPERFAMILY SSF53790 7 241 3.01E-35 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PACID_08810 a612aad481ecd9d1ddfa2fc4c6ec21fb 253 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 10 242 1.4E-67 T 14-10-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 PACID_08810 a612aad481ecd9d1ddfa2fc4c6ec21fb 253 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 224 1.3E-40 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PACID_08810 a612aad481ecd9d1ddfa2fc4c6ec21fb 253 PIRSF PIRSF036427 8 250 9.8E-62 T 14-10-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 PACID_08810 a612aad481ecd9d1ddfa2fc4c6ec21fb 253 Gene3D G3DSA:3.30.950.10 145 252 3.2E-10 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PACID_08810 a612aad481ecd9d1ddfa2fc4c6ec21fb 253 Gene3D G3DSA:3.40.1010.10 8 143 1.6E-28 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PACID_09400 668c61919db2a6e88a58135be487d13a 465 SUPERFAMILY SSF53448 67 440 2.62E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_09400 668c61919db2a6e88a58135be487d13a 465 Gene3D G3DSA:2.160.10.10 362 461 1.2E-24 T 14-10-2018 PACID_09400 668c61919db2a6e88a58135be487d13a 465 Gene3D G3DSA:3.90.550.10 2 361 9.4E-136 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_09400 668c61919db2a6e88a58135be487d13a 465 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 25 435 1.7E-118 T 14-10-2018 IPR002618 UDPGP family GO:0070569 PACID_09400 668c61919db2a6e88a58135be487d13a 465 PIRSF PIRSF000806 1 465 1.3E-139 T 14-10-2018 IPR016267 UTP--glucose-1-phosphate uridylyltransferase GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817|Reactome: R-HSA-173599|Reactome: R-HSA-3322077 PACID_33780 4ad0ece7a0e6e6462eaabbc3eb7ec97e 747 Gene3D G3DSA:2.60.120.200 543 742 7.8E-17 T 14-10-2018 PACID_33780 4ad0ece7a0e6e6462eaabbc3eb7ec97e 747 Gene3D G3DSA:2.115.10.20 48 355 4.3E-73 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PACID_33780 4ad0ece7a0e6e6462eaabbc3eb7ec97e 747 Pfam PF04616 Glycosyl hydrolases family 43 53 354 6.0E-46 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 PACID_33780 4ad0ece7a0e6e6462eaabbc3eb7ec97e 747 SUPERFAMILY SSF49899 544 737 6.33E-9 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PACID_33780 4ad0ece7a0e6e6462eaabbc3eb7ec97e 747 SUPERFAMILY SSF75005 41 356 2.36E-62 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PACID_23670 cab40c09885082e7aebdf3cdb016d244 143 Gene3D G3DSA:3.10.180.10 9 142 1.0E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_23670 cab40c09885082e7aebdf3cdb016d244 143 SUPERFAMILY SSF54593 4 140 2.74E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_23670 cab40c09885082e7aebdf3cdb016d244 143 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 138 6.3E-7 T 14-10-2018 IPR028973 PhnB-like PACID_18570 fb10d68630f9e467d0a4022b38866b87 301 Pfam PF02358 Trehalose-phosphatase 43 247 2.8E-21 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 PACID_18570 fb10d68630f9e467d0a4022b38866b87 301 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 42 289 5.6E-27 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 PACID_18570 fb10d68630f9e467d0a4022b38866b87 301 Gene3D G3DSA:3.30.70.1020 128 208 3.5E-25 T 14-10-2018 PACID_18570 fb10d68630f9e467d0a4022b38866b87 301 SUPERFAMILY SSF56784 40 289 3.88E-28 T 14-10-2018 IPR036412 HAD-like superfamily PACID_18570 fb10d68630f9e467d0a4022b38866b87 301 Gene3D G3DSA:3.40.50.1000 41 243 3.5E-25 T 14-10-2018 IPR023214 HAD superfamily PACID_18570 fb10d68630f9e467d0a4022b38866b87 301 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 40 247 1.6E-14 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PACID_00900 5151adef283858a27f68b6514355d6ca 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 129 1.2E-24 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_00900 5151adef283858a27f68b6514355d6ca 352 Gene3D G3DSA:3.40.50.720 156 294 5.7E-83 T 14-10-2018 PACID_00900 5151adef283858a27f68b6514355d6ca 352 Pfam PF00107 Zinc-binding dehydrogenase 179 307 2.7E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_00900 5151adef283858a27f68b6514355d6ca 352 SUPERFAMILY SSF51735 144 310 4.87E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_00900 5151adef283858a27f68b6514355d6ca 352 Gene3D G3DSA:3.90.180.10 12 334 5.7E-83 T 14-10-2018 PACID_00900 5151adef283858a27f68b6514355d6ca 352 SUPERFAMILY SSF50129 4 178 6.7E-41 T 14-10-2018 IPR011032 GroES-like superfamily PACID_00140 d3434b1f7a642182bb9066735140e56a 336 Gene3D G3DSA:3.40.50.2300 57 306 2.9E-78 T 14-10-2018 PACID_00140 d3434b1f7a642182bb9066735140e56a 336 Gene3D G3DSA:1.10.260.40 1 56 1.3E-21 T 14-10-2018 PACID_00140 d3434b1f7a642182bb9066735140e56a 336 SMART SM00354 3 73 6.7E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_00140 d3434b1f7a642182bb9066735140e56a 336 Pfam PF13377 Periplasmic binding protein-like domain 170 327 1.1E-37 T 14-10-2018 PACID_00140 d3434b1f7a642182bb9066735140e56a 336 SUPERFAMILY SSF47413 2 61 1.55E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_00140 d3434b1f7a642182bb9066735140e56a 336 Gene3D G3DSA:3.40.50.2300 162 289 2.9E-78 T 14-10-2018 PACID_00140 d3434b1f7a642182bb9066735140e56a 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 6.5E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_00140 d3434b1f7a642182bb9066735140e56a 336 SUPERFAMILY SSF53822 63 329 2.36E-72 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_31990 0a64bb29e6c303325a14b734f0016155 308 SUPERFAMILY SSF161098 73 298 7.59E-47 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31990 0a64bb29e6c303325a14b734f0016155 308 Gene3D G3DSA:1.10.3720.10 69 306 2.2E-51 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31990 0a64bb29e6c303325a14b734f0016155 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 299 2.9E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_21870 d2d9290f0de332a10baa217c600628dc 319 Gene3D G3DSA:1.20.1260.10 186 315 4.0E-8 T 14-10-2018 IPR012347 Ferritin-like PACID_21870 d2d9290f0de332a10baa217c600628dc 319 SUPERFAMILY SSF47240 211 318 2.51E-9 T 14-10-2018 IPR009078 Ferritin-like superfamily PACID_21870 d2d9290f0de332a10baa217c600628dc 319 Pfam PF14530 Domain of unknown function (DUF4439) 215 317 4.2E-11 T 14-10-2018 IPR029447 Domain of unknown function DUF4439 PACID_31660 a28e1d413648303abee41b61b6c16ab9 559 Pfam PF00083 Sugar (and other) transporter 83 496 1.1E-39 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_31660 a28e1d413648303abee41b61b6c16ab9 559 Gene3D G3DSA:1.20.1250.20 78 502 2.4E-59 T 14-10-2018 PACID_31660 a28e1d413648303abee41b61b6c16ab9 559 SUPERFAMILY SSF103473 77 497 1.96E-62 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_31660 a28e1d413648303abee41b61b6c16ab9 559 ProSitePatterns PS00216 Sugar transport proteins signature 1. 366 383 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_31660 a28e1d413648303abee41b61b6c16ab9 559 ProSitePatterns PS00217 Sugar transport proteins signature 2. 189 214 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_21820 66f1d8bb5456900deee62576683c6008 668 Gene3D G3DSA:1.10.510.10 355 424 9.3E-7 T 14-10-2018 PACID_21820 66f1d8bb5456900deee62576683c6008 668 Gene3D G3DSA:3.30.200.20 341 354 9.3E-7 T 14-10-2018 PACID_21820 66f1d8bb5456900deee62576683c6008 668 Pfam PF03109 ABC1 family 217 337 2.9E-25 T 14-10-2018 IPR004147 UbiB domain PACID_21820 66f1d8bb5456900deee62576683c6008 668 SUPERFAMILY SSF56112 201 420 1.23E-24 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_12530 3e8bbc419827f7d7264580b9f39174a2 305 Pfam PF02219 Methylenetetrahydrofolate reductase 17 292 8.9E-79 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 PACID_12530 3e8bbc419827f7d7264580b9f39174a2 305 Gene3D G3DSA:3.20.20.220 10 296 2.8E-88 T 14-10-2018 PACID_12530 3e8bbc419827f7d7264580b9f39174a2 305 SUPERFAMILY SSF51730 17 294 3.14E-82 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like PACID_04790 9a6a638c184416f43380f9d8ed760bee 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 2.4E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_04790 9a6a638c184416f43380f9d8ed760bee 255 SUPERFAMILY SSF46785 5 59 1.4E-9 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_04790 9a6a638c184416f43380f9d8ed760bee 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.5E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_04790 9a6a638c184416f43380f9d8ed760bee 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.5E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_04790 9a6a638c184416f43380f9d8ed760bee 255 SMART SM00420 6 58 9.4E-14 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 PACID_04790 9a6a638c184416f43380f9d8ed760bee 255 SUPERFAMILY SSF100950 77 234 1.15E-25 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_04790 9a6a638c184416f43380f9d8ed760bee 255 SMART SM01134 74 234 3.8E-58 T 14-10-2018 PACID_04790 9a6a638c184416f43380f9d8ed760bee 255 Pfam PF00455 DeoR C terminal sensor domain 77 233 1.3E-43 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain PACID_17110 d6e8888370dee810afa492dc22d33cea 448 Pfam PF13657 HipA N-terminal domain 9 105 1.5E-14 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 PACID_17110 d6e8888370dee810afa492dc22d33cea 448 Pfam PF07804 HipA-like C-terminal domain 147 376 1.4E-46 T 14-10-2018 IPR012893 HipA-like, C-terminal PACID_17110 d6e8888370dee810afa492dc22d33cea 448 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 105 3.2E-16 T 14-10-2018 IPR017508 HipA, N-terminal subdomain 1 PACID_05630 11cad35fb56e5d1c11172f85dbf3ac24 111 Gene3D G3DSA:3.30.110.70 51 111 1.7E-10 T 14-10-2018 PACID_05630 11cad35fb56e5d1c11172f85dbf3ac24 111 SUPERFAMILY SSF117782 19 108 1.15E-18 T 14-10-2018 IPR035439 UPF0145 domain superfamily PACID_05630 11cad35fb56e5d1c11172f85dbf3ac24 111 Pfam PF01906 Putative heavy-metal-binding 54 107 1.9E-12 T 14-10-2018 IPR002765 Uncharacterised protein family UPF0145 PACID_06570 a8d5674c9570ec7df95cf309e0f4f99a 510 SUPERFAMILY SSF53067 6 257 5.24E-38 T 14-10-2018 PACID_06570 a8d5674c9570ec7df95cf309e0f4f99a 510 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 268 458 3.7E-26 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_06570 a8d5674c9570ec7df95cf309e0f4f99a 510 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 62 255 4.1E-21 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_06570 a8d5674c9570ec7df95cf309e0f4f99a 510 SUPERFAMILY SSF53067 266 495 2.16E-32 T 14-10-2018 PACID_06570 a8d5674c9570ec7df95cf309e0f4f99a 510 Gene3D G3DSA:3.30.420.40 248 501 2.6E-87 T 14-10-2018 PACID_06570 a8d5674c9570ec7df95cf309e0f4f99a 510 Gene3D G3DSA:3.30.420.40 2 247 4.1E-76 T 14-10-2018 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 18 41 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 Gene3D G3DSA:3.30.10.20 470 538 1.5E-14 T 14-10-2018 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 Gene3D G3DSA:3.30.200.20 2 97 8.1E-35 T 14-10-2018 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 SUPERFAMILY SSF56112 7 274 5.53E-78 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 SMART SM00220 12 277 9.7E-66 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 Gene3D G3DSA:3.30.10.20 404 469 1.1E-17 T 14-10-2018 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 Gene3D G3DSA:1.10.510.10 99 284 3.1E-53 T 14-10-2018 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 Pfam PF00069 Protein kinase domain 12 271 1.1E-50 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 SMART SM00740 468 538 5.7E-13 T 14-10-2018 IPR005543 PASTA domain PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 SMART SM00740 401 467 3.9E-13 T 14-10-2018 IPR005543 PASTA domain PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 Pfam PF03793 PASTA domain 478 537 1.1E-13 T 14-10-2018 IPR005543 PASTA domain PACID_05680 74b30f2ee5892431f780f49ba4b9f048 598 Pfam PF03793 PASTA domain 405 466 7.1E-13 T 14-10-2018 IPR005543 PASTA domain PACID_24960 3ed54b85699d84fae981457da576ecc6 399 Gene3D G3DSA:3.40.50.150 82 242 3.9E-25 T 14-10-2018 PACID_24960 3ed54b85699d84fae981457da576ecc6 399 SUPERFAMILY SSF53335 61 226 3.11E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_08190 5ccb28fa6fa7e8a3edb723b51a32d3ab 341 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 250 340 6.9E-42 T 14-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 PACID_08190 5ccb28fa6fa7e8a3edb723b51a32d3ab 341 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 8 194 6.4E-60 T 14-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 PACID_12410 851353aceb201b409e9a5e12ee279c92 361 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 4 317 1.9E-90 T 14-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 PACID_12410 851353aceb201b409e9a5e12ee279c92 361 ProSitePatterns PS01125 ROK family signature. 130 157 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PACID_12410 851353aceb201b409e9a5e12ee279c92 361 SUPERFAMILY SSF53067 4 314 6.49E-68 T 14-10-2018 PACID_12410 851353aceb201b409e9a5e12ee279c92 361 Pfam PF00480 ROK family 4 313 1.0E-77 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PACID_12410 851353aceb201b409e9a5e12ee279c92 361 Gene3D G3DSA:3.30.420.40 122 295 2.4E-105 T 14-10-2018 PACID_12410 851353aceb201b409e9a5e12ee279c92 361 Gene3D G3DSA:3.30.420.40 4 308 2.4E-105 T 14-10-2018 PACID_02450 c15a6284afb4400cae64b3c803dd0664 89 Pfam PF01402 Ribbon-helix-helix protein, copG family 50 87 9.2E-10 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 114 607 1.4E-223 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 SUPERFAMILY SSF140990 418 611 3.14E-67 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 336 6.9E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 Pfam PF01434 Peptidase family M41 400 605 5.2E-76 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 SMART SM00382 200 339 5.0E-25 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 Gene3D G3DSA:3.40.50.300 155 337 3.2E-69 T 14-10-2018 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 Gene3D G3DSA:1.20.58.760 418 616 1.9E-67 T 14-10-2018 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 6 645 36.292 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 ProSitePatterns PS00674 AAA-protein family signature. 307 325 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 SUPERFAMILY SSF52540 160 408 5.58E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 Pfam PF06480 FtsH Extracellular 11 100 2.5E-6 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 PACID_28490 05779dfc4046fc21e3e91db1e5afcf88 749 Gene3D G3DSA:1.10.8.60 338 415 1.1E-25 T 14-10-2018 PACID_06230 7abde47104d2ade1375393dd72f0eb02 543 Pfam PF01522 Polysaccharide deacetylase 331 447 3.7E-28 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 PACID_06230 7abde47104d2ade1375393dd72f0eb02 543 Gene3D G3DSA:3.20.20.370 320 519 4.3E-57 T 14-10-2018 PACID_06230 7abde47104d2ade1375393dd72f0eb02 543 SUPERFAMILY SSF88713 325 515 5.44E-51 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PACID_31890 338520196f54dee1835bcc338b0b611e 464 Gene3D G3DSA:3.40.190.10 180 443 4.3E-77 T 14-10-2018 PACID_31890 338520196f54dee1835bcc338b0b611e 464 Pfam PF13416 Bacterial extracellular solute-binding protein 84 387 1.1E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_31890 338520196f54dee1835bcc338b0b611e 464 Gene3D G3DSA:3.40.190.10 69 408 4.3E-77 T 14-10-2018 PACID_31890 338520196f54dee1835bcc338b0b611e 464 SUPERFAMILY SSF53850 67 446 4.35E-54 T 14-10-2018 PACID_03840 c04ac64d24c99a8b9c985bbf74cb65fb 101 Pfam PF01527 Transposase 9 80 7.1E-13 T 14-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 PACID_03840 c04ac64d24c99a8b9c985bbf74cb65fb 101 Gene3D G3DSA:1.10.10.60 16 92 2.8E-9 T 14-10-2018 PACID_03840 c04ac64d24c99a8b9c985bbf74cb65fb 101 SUPERFAMILY SSF46689 12 98 1.11E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_25620 6a4e538cd03e07d6c2922e30d50b3dd3 284 Gene3D G3DSA:1.10.3720.10 43 281 1.6E-61 T 14-10-2018 IPR035906 MetI-like superfamily PACID_25620 6a4e538cd03e07d6c2922e30d50b3dd3 284 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 274 9.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_25620 6a4e538cd03e07d6c2922e30d50b3dd3 284 SUPERFAMILY SSF161098 47 274 4.45E-56 T 14-10-2018 IPR035906 MetI-like superfamily PACID_23310 857722ce48086c8b311444e26cf2c863 192 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 12 190 2.4E-74 T 14-10-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 PACID_23310 857722ce48086c8b311444e26cf2c863 192 Pfam PF03352 Methyladenine glycosylase 15 190 1.9E-69 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 PACID_23310 857722ce48086c8b311444e26cf2c863 192 Gene3D G3DSA:1.10.340.30 10 192 2.6E-74 T 14-10-2018 PACID_23310 857722ce48086c8b311444e26cf2c863 192 SUPERFAMILY SSF48150 11 191 4.6E-69 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 PACID_24060 fcd55ad5a0bec52453b44251bdae253f 85 Hamap MF_01479 Transcriptional regulator WhiB [whiB]. 16 85 18.464 T 14-10-2018 IPR003482 Transcription factor WhiB PACID_24060 fcd55ad5a0bec52453b44251bdae253f 85 Pfam PF02467 Transcription factor WhiB 18 81 2.6E-26 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain PACID_07350 497cd6ce95f41902a545b73f9a3887a5 460 SUPERFAMILY SSF53850 62 445 4.79E-65 T 14-10-2018 PACID_07350 497cd6ce95f41902a545b73f9a3887a5 460 Pfam PF13416 Bacterial extracellular solute-binding protein 79 395 9.2E-45 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_07350 497cd6ce95f41902a545b73f9a3887a5 460 Gene3D G3DSA:3.40.190.10 59 456 6.8E-85 T 14-10-2018 PACID_14320 34a38053f355bdfa5ee5c40ec3663628 378 SUPERFAMILY SSF56112 25 273 1.24E-9 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_24320 8836b13572c19106b83b795cd6ab5055 555 Gene3D G3DSA:3.40.50.12780 11 440 9.1E-82 T 14-10-2018 PACID_24320 8836b13572c19106b83b795cd6ab5055 555 Pfam PF13193 AMP-binding enzyme C-terminal domain 457 530 2.5E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PACID_24320 8836b13572c19106b83b795cd6ab5055 555 SUPERFAMILY SSF56801 17 534 1.83E-112 T 14-10-2018 PACID_24320 8836b13572c19106b83b795cd6ab5055 555 Gene3D G3DSA:3.30.300.310 443 538 1.8E-26 T 14-10-2018 PACID_24320 8836b13572c19106b83b795cd6ab5055 555 Pfam PF00501 AMP-binding enzyme 24 447 3.8E-67 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PACID_22290 c5f099ee75c83e51102c7cee33d6b11b 220 SUPERFAMILY SSF56112 25 183 3.5E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_22290 c5f099ee75c83e51102c7cee33d6b11b 220 Pfam PF01636 Phosphotransferase enzyme family 64 167 7.4E-9 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PACID_22290 c5f099ee75c83e51102c7cee33d6b11b 220 Gene3D G3DSA:3.90.1200.10 18 213 1.8E-9 T 14-10-2018 PACID_05840 43699e1fcd94bbd2a669b78ea2c4a803 135 Pfam PF04892 VanZ like family 8 126 3.3E-11 T 14-10-2018 IPR006976 VanZ-like PACID_29580 ea832905b3a851c29dede709fb5605b7 340 SUPERFAMILY SSF161111 41 236 1.83E-29 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_29580 ea832905b3a851c29dede709fb5605b7 340 Pfam PF01545 Cation efflux family 41 234 2.5E-19 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 PACID_29580 ea832905b3a851c29dede709fb5605b7 340 Gene3D G3DSA:1.20.1510.10 29 234 1.1E-24 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily PACID_26590 ecf86c50998f010e8be4c2d0f58fa03e 295 SUPERFAMILY SSF53448 28 289 2.63E-41 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_26590 ecf86c50998f010e8be4c2d0f58fa03e 295 Pfam PF00483 Nucleotidyl transferase 30 262 5.6E-21 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PACID_26590 ecf86c50998f010e8be4c2d0f58fa03e 295 Gene3D G3DSA:3.90.550.10 18 293 2.4E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_32860 db7baf9431d95190159e69e5b9cc7e53 290 Gene3D G3DSA:3.20.10.10 125 288 5.6E-45 T 14-10-2018 PACID_32860 db7baf9431d95190159e69e5b9cc7e53 290 Gene3D G3DSA:3.30.470.10 10 123 1.0E-19 T 14-10-2018 PACID_32860 db7baf9431d95190159e69e5b9cc7e53 290 SUPERFAMILY SSF56752 18 285 1.83E-46 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PACID_32860 db7baf9431d95190159e69e5b9cc7e53 290 Pfam PF01063 Amino-transferase class IV 36 265 1.7E-31 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PACID_01980 9037816cbc22f1c7d6ee910164eb7098 745 Pfam PF13439 Glycosyltransferase Family 4 337 526 2.0E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_01980 9037816cbc22f1c7d6ee910164eb7098 745 Pfam PF05653 Magnesium transporter NIPA 58 108 1.1E-6 T 14-10-2018 IPR008521 Magnesium transporter NIPA GO:0015095|GO:0015693|GO:0016021 Reactome: R-HSA-5223345 PACID_01980 9037816cbc22f1c7d6ee910164eb7098 745 SUPERFAMILY SSF53756 325 726 3.24E-35 T 14-10-2018 PACID_01980 9037816cbc22f1c7d6ee910164eb7098 745 Gene3D G3DSA:3.40.50.2000 535 707 2.1E-8 T 14-10-2018 PACID_23170 90eaa813b9c660e1900baf4b683e7a69 157 SMART SM00347 30 130 8.4E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23170 90eaa813b9c660e1900baf4b683e7a69 157 Gene3D G3DSA:1.10.10.10 13 145 3.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_23170 90eaa813b9c660e1900baf4b683e7a69 157 Pfam PF01047 MarR family 41 94 4.7E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23170 90eaa813b9c660e1900baf4b683e7a69 157 SUPERFAMILY SSF46785 29 143 1.66E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_24610 e337da666c82e5dbbf3eb73686588a40 297 Gene3D G3DSA:3.40.640.10 1 139 2.4E-7 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_24610 e337da666c82e5dbbf3eb73686588a40 297 SUPERFAMILY SSF53383 4 295 1.16E-8 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_10480 c266b118d202b3cd7b85ea2eccc18977 421 Pfam PF13742 OB-fold nucleic acid binding domain 17 104 1.6E-10 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 PACID_10480 c266b118d202b3cd7b85ea2eccc18977 421 Pfam PF02601 Exonuclease VII, large subunit 324 396 2.8E-8 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PACID_10480 c266b118d202b3cd7b85ea2eccc18977 421 Pfam PF02601 Exonuclease VII, large subunit 128 343 4.7E-57 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 PACID_10480 c266b118d202b3cd7b85ea2eccc18977 421 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 16 399 7.3E-110 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PACID_10480 c266b118d202b3cd7b85ea2eccc18977 421 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 6 400 21.291 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 PACID_32440 76552d2cff8fe1b7fc789b20d7e3b1fb 327 Pfam PF01553 Acyltransferase 41 180 9.7E-18 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PACID_32440 76552d2cff8fe1b7fc789b20d7e3b1fb 327 SMART SM00563 57 183 3.6E-19 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PACID_32440 76552d2cff8fe1b7fc789b20d7e3b1fb 327 SUPERFAMILY SSF69593 38 236 2.88E-30 T 14-10-2018 PACID_34300 94c8028aed31f478a0ede7c0cb6ecfff 208 Gene3D G3DSA:3.30.1370.50 146 208 3.2E-19 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 PACID_34300 94c8028aed31f478a0ede7c0cb6ecfff 208 SMART SM00393 130 208 1.6E-28 T 14-10-2018 IPR001374 R3H domain GO:0003676 PACID_34300 94c8028aed31f478a0ede7c0cb6ecfff 208 SUPERFAMILY SSF82708 161 207 7.85E-12 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 PACID_34300 94c8028aed31f478a0ede7c0cb6ecfff 208 Pfam PF01424 R3H domain 150 207 5.0E-18 T 14-10-2018 IPR001374 R3H domain GO:0003676 PACID_34300 94c8028aed31f478a0ede7c0cb6ecfff 208 Gene3D G3DSA:3.30.300.20 64 145 5.6E-13 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_30440 673cd9efe3496cc142f250160524e575 542 Gene3D G3DSA:3.40.50.300 26 119 3.5E-11 T 14-10-2018 PACID_30440 673cd9efe3496cc142f250160524e575 542 SUPERFAMILY SSF52540 51 404 3.11E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_30440 673cd9efe3496cc142f250160524e575 542 Gene3D G3DSA:3.40.50.300 214 415 1.5E-22 T 14-10-2018 PACID_30440 673cd9efe3496cc142f250160524e575 542 Pfam PF05872 Bacterial protein of unknown function (DUF853) 48 539 4.4E-197 T 14-10-2018 IPR033186 Helicase HerA-like C-terminal PACID_09290 7f8f5170df87e570078517cafc895216 358 Gene3D G3DSA:3.20.20.70 9 297 4.8E-50 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_09290 7f8f5170df87e570078517cafc895216 358 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 20 290 5.4E-36 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 PACID_09290 7f8f5170df87e570078517cafc895216 358 SUPERFAMILY SSF51569 9 354 5.5E-55 T 14-10-2018 PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 Pfam PF00005 ABC transporter 287 440 1.6E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 Gene3D G3DSA:3.40.50.300 255 515 7.1E-43 T 14-10-2018 PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 Gene3D G3DSA:3.40.50.300 5 246 2.5E-54 T 14-10-2018 PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 Pfam PF00005 ABC transporter 35 183 7.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 SMART SM00382 295 489 0.4 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 SMART SM00382 43 231 1.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 SUPERFAMILY SSF52540 268 495 3.1E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_24490 2062b4fbfe9d749aea8a72820ca8b06e 533 SUPERFAMILY SSF52540 19 240 2.02E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_19620 422164701c73522bd7d33826a6d6bfc1 411 Gene3D G3DSA:3.40.50.2000 243 389 6.1E-27 T 14-10-2018 PACID_19620 422164701c73522bd7d33826a6d6bfc1 411 SUPERFAMILY SSF53756 84 402 9.94E-17 T 14-10-2018 PACID_19620 422164701c73522bd7d33826a6d6bfc1 411 Gene3D G3DSA:3.40.50.11090 88 231 2.2E-14 T 14-10-2018 PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 Pfam PF00696 Amino acid kinase family 37 282 1.5E-42 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 Gene3D G3DSA:3.40.1160.10 12 311 3.7E-92 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 PIRSF PIRSF000728 21 306 4.9E-99 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 PRINTS PR00474 Glutamate 5-kinase family signature 256 276 9.5E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 PRINTS PR00474 Glutamate 5-kinase family signature 67 81 9.5E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 PRINTS PR00474 Glutamate 5-kinase family signature 205 232 9.5E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 TIGRFAM TIGR00761 argB: acetylglutamate kinase 37 281 1.2E-65 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 SUPERFAMILY SSF53633 16 308 1.7E-76 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily PACID_20330 31aea985f9cb4ae182e781e7b6715b89 316 Hamap MF_00082 Acetylglutamate kinase [argB]. 35 299 45.717 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_23210 ba973047a58f2b9d17ccc671fa9bef5e 162 Pfam PF12802 MarR family 42 103 1.8E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23210 ba973047a58f2b9d17ccc671fa9bef5e 162 SUPERFAMILY SSF46785 8 153 7.41E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_23210 ba973047a58f2b9d17ccc671fa9bef5e 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 79 1.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23210 ba973047a58f2b9d17ccc671fa9bef5e 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 99 115 1.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23210 ba973047a58f2b9d17ccc671fa9bef5e 162 PRINTS PR00598 Bacterial regulatory protein MarR family signature 80 95 1.4E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23210 ba973047a58f2b9d17ccc671fa9bef5e 162 SMART SM00347 37 140 1.6E-17 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23210 ba973047a58f2b9d17ccc671fa9bef5e 162 Gene3D G3DSA:1.10.10.10 10 155 5.1E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18350 fe90f41b645fc8c67693d0d151de0535 309 PIRSF PIRSF006250 26 309 4.5E-86 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 PACID_18350 fe90f41b645fc8c67693d0d151de0535 309 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 32 308 1.0E-86 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 PACID_18350 fe90f41b645fc8c67693d0d151de0535 309 SUPERFAMILY SSF51690 136 308 1.29E-53 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PACID_18350 fe90f41b645fc8c67693d0d151de0535 309 Gene3D G3DSA:3.90.1170.20 36 306 6.7E-95 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 PACID_18350 fe90f41b645fc8c67693d0d151de0535 309 Gene3D G3DSA:3.20.20.70 140 299 6.7E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_18350 fe90f41b645fc8c67693d0d151de0535 309 SUPERFAMILY SSF54675 30 135 9.22E-22 T 14-10-2018 PACID_18350 fe90f41b645fc8c67693d0d151de0535 309 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 45 134 2.9E-20 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 PACID_18350 fe90f41b645fc8c67693d0d151de0535 309 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 136 307 3.1E-53 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 PACID_09520 c491e88636bf0ca84f8dd32edd1460a6 161 Pfam PF12867 DinB superfamily 25 155 1.5E-7 T 14-10-2018 IPR024775 DinB-like domain PACID_09520 c491e88636bf0ca84f8dd32edd1460a6 161 SUPERFAMILY SSF109854 17 154 4.4E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_09520 c491e88636bf0ca84f8dd32edd1460a6 161 Gene3D G3DSA:1.20.120.450 12 160 6.9E-12 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_15210 2a5fe9ee21c0762f085679d8de0a65d2 159 SUPERFAMILY SSF142433 5 149 1.7E-41 T 14-10-2018 IPR036653 CinA-like, C-terminal PACID_15210 2a5fe9ee21c0762f085679d8de0a65d2 159 Gene3D G3DSA:3.90.950.20 2 156 2.5E-47 T 14-10-2018 IPR036653 CinA-like, C-terminal PACID_15210 2a5fe9ee21c0762f085679d8de0a65d2 159 Pfam PF02464 Competence-damaged protein 5 149 9.6E-43 T 14-10-2018 IPR008136 CinA, C-terminal PACID_15210 2a5fe9ee21c0762f085679d8de0a65d2 159 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 147 8.5E-32 T 14-10-2018 IPR008136 CinA, C-terminal PACID_23610 5bef9a14c2f134c8ce30ac55b4883c3d 165 SUPERFAMILY SSF46785 9 141 1.58E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_23610 5bef9a14c2f134c8ce30ac55b4883c3d 165 Pfam PF12802 MarR family 37 94 2.1E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23610 5bef9a14c2f134c8ce30ac55b4883c3d 165 SMART SM00347 31 131 2.8E-11 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_23610 5bef9a14c2f134c8ce30ac55b4883c3d 165 Gene3D G3DSA:1.10.10.10 2 146 7.8E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_21730 7fe59f376c673afb2a115f5af5c0ad38 295 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 209 4.7E-10 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 PACID_21730 7fe59f376c673afb2a115f5af5c0ad38 295 Pfam PF09142 tRNA Pseudouridine synthase II, C terminal 236 294 6.9E-8 T 14-10-2018 IPR015225 tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_21730 7fe59f376c673afb2a115f5af5c0ad38 295 SUPERFAMILY SSF55120 4 212 1.41E-68 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_21730 7fe59f376c673afb2a115f5af5c0ad38 295 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 27 179 2.9E-49 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 PACID_21730 7fe59f376c673afb2a115f5af5c0ad38 295 Gene3D G3DSA:3.30.2350.10 7 222 1.2E-85 T 14-10-2018 PACID_21730 7fe59f376c673afb2a115f5af5c0ad38 295 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 5 294 17.086 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_21730 7fe59f376c673afb2a115f5af5c0ad38 295 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 6 211 6.2E-68 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_27470 0d80d12b05d971b779e241d7f64c9423 465 Pfam PF02397 Bacterial sugar transferase 257 437 2.7E-65 T 14-10-2018 IPR003362 Bacterial sugar transferase PACID_27470 0d80d12b05d971b779e241d7f64c9423 465 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 18 439 1.5E-110 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PACID_14910 dba8e94f590a7f283f36d43a078397c5 326 SUPERFAMILY SSF53300 98 287 7.47E-27 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_14910 dba8e94f590a7f283f36d43a078397c5 326 SMART SM00327 96 271 3.1E-18 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_14910 dba8e94f590a7f283f36d43a078397c5 326 Pfam PF13519 von Willebrand factor type A domain 100 209 7.5E-19 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_14910 dba8e94f590a7f283f36d43a078397c5 326 Pfam PF07584 Aerotolerance regulator N-terminal 16 86 1.6E-7 T 14-10-2018 IPR024163 Aerotolerance regulator, N-terminal PACID_14910 dba8e94f590a7f283f36d43a078397c5 326 Gene3D G3DSA:3.40.50.410 88 290 1.6E-42 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_17000 d1b6ef1d065ec3b6980df6abae52f26a 406 Gene3D G3DSA:3.30.750.70 174 268 5.0E-24 T 14-10-2018 PACID_17000 d1b6ef1d065ec3b6980df6abae52f26a 406 SUPERFAMILY SSF100950 27 208 1.0E-10 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_17000 d1b6ef1d065ec3b6980df6abae52f26a 406 Gene3D G3DSA:3.40.1080.20 271 405 4.0E-33 T 14-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily PACID_17000 d1b6ef1d065ec3b6980df6abae52f26a 406 Gene3D G3DSA:3.40.1080.10 7 170 1.8E-21 T 14-10-2018 PACID_17000 d1b6ef1d065ec3b6980df6abae52f26a 406 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 252 400 3.9E-38 T 14-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain PACID_17000 d1b6ef1d065ec3b6980df6abae52f26a 406 SUPERFAMILY SSF100950 173 404 1.12E-39 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 Gene3D G3DSA:3.40.50.460 556 750 2.2E-127 T 14-10-2018 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 SUPERFAMILY SSF53784 15 364 3.4E-103 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 ProSitePatterns PS00433 Phosphofructokinase signature. 303 321 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 Pfam PF00365 Phosphofructokinase 28 333 5.8E-109 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 Pfam PF00365 Phosphofructokinase 413 697 1.6E-92 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 TIGRFAM TIGR02478 6PF1K_euk: 6-phosphofructokinase 28 756 0.0 T 14-10-2018 IPR009161 ATP-dependent 6-phosphofructokinase, eukaryotic-type GO:0003872|GO:0005524|GO:0005737|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 SUPERFAMILY SSF53784 354 749 1.27E-98 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PIRSF PIRSF000533 3 759 0.0 T 14-10-2018 IPR009161 ATP-dependent 6-phosphofructokinase, eukaryotic-type GO:0003872|GO:0005524|GO:0005737|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 Gene3D G3DSA:3.40.50.460 192 396 4.9E-164 T 14-10-2018 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 Gene3D G3DSA:3.40.50.450 28 372 4.9E-164 T 14-10-2018 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 208 224 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 226 243 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 136 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 170 187 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 50 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 188 206 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 265 277 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 299 321 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 56 69 5.5E-88 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 ProSitePatterns PS00433 Phosphofructokinase signature. 666 684 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 PACID_33140 aa1ad78110b0da2ccc8e458890503d16 759 Gene3D G3DSA:3.40.50.450 414 733 2.2E-127 T 14-10-2018 PACID_02300 1d69e99bfe3d5174dc330e0393a1dd8b 319 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 44 81 2.1E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PACID_02300 1d69e99bfe3d5174dc330e0393a1dd8b 319 SUPERFAMILY SSF161098 110 295 1.96E-19 T 14-10-2018 IPR035906 MetI-like superfamily PACID_02300 1d69e99bfe3d5174dc330e0393a1dd8b 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 133 312 2.8E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_02300 1d69e99bfe3d5174dc330e0393a1dd8b 319 Gene3D G3DSA:1.10.3720.10 104 310 2.9E-17 T 14-10-2018 IPR035906 MetI-like superfamily PACID_23490 e18230f878fe455283a987d1ca70341f 225 Gene3D G3DSA:2.160.10.10 6 205 4.1E-59 T 14-10-2018 PACID_23490 e18230f878fe455283a987d1ca70341f 225 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 127 155 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 PACID_23490 e18230f878fe455283a987d1ca70341f 225 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 153 3.6E-11 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_23490 e18230f878fe455283a987d1ca70341f 225 SUPERFAMILY SSF51161 55 202 3.6E-44 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_16540 0e0fb861be4d9ce157275f3bc4acf989 207 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 90 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PACID_16540 0e0fb861be4d9ce157275f3bc4acf989 207 Pfam PF01066 CDP-alcohol phosphatidyltransferase 26 90 3.0E-11 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 PACID_16540 0e0fb861be4d9ce157275f3bc4acf989 207 Gene3D G3DSA:1.20.120.1760 6 207 2.1E-58 T 14-10-2018 PACID_32920 b910b79f80982c3f58912d31be6c56e7 279 SUPERFAMILY SSF161098 21 279 2.24E-64 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32920 b910b79f80982c3f58912d31be6c56e7 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 265 2.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_32920 b910b79f80982c3f58912d31be6c56e7 279 Gene3D G3DSA:1.10.3720.10 11 269 3.3E-62 T 14-10-2018 IPR035906 MetI-like superfamily PACID_11930 cf7c752285a2f1ed1184375dd25c9d36 444 SUPERFAMILY SSF54368 8 102 9.68E-30 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_11930 cf7c752285a2f1ed1184375dd25c9d36 444 Gene3D G3DSA:3.10.20.70 2 105 4.9E-35 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_11930 cf7c752285a2f1ed1184375dd25c9d36 444 SUPERFAMILY SSF55931 105 441 1.08E-116 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PACID_11930 cf7c752285a2f1ed1184375dd25c9d36 444 Gene3D G3DSA:3.30.590.10 106 443 7.5E-123 T 14-10-2018 PACID_11930 cf7c752285a2f1ed1184375dd25c9d36 444 SMART SM01230 103 354 3.0E-121 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_11930 cf7c752285a2f1ed1184375dd25c9d36 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 231 246 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PACID_11930 cf7c752285a2f1ed1184375dd25c9d36 444 Pfam PF00120 Glutamine synthetase, catalytic domain 104 440 4.7E-124 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 PACID_11930 cf7c752285a2f1ed1184375dd25c9d36 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 16 97 7.8E-27 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 PACID_22130 374c9e8e981e3ddc26d37ef7918da57a 647 Pfam PF04434 SWIM zinc finger 44 84 1.3E-4 T 14-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 PACID_20490 fbb18a81563dc5a3327197042c44a34b 250 SMART SM00563 48 165 5.4E-31 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PACID_20490 fbb18a81563dc5a3327197042c44a34b 250 Pfam PF01553 Acyltransferase 35 161 8.1E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PACID_20490 fbb18a81563dc5a3327197042c44a34b 250 SUPERFAMILY SSF69593 31 229 4.71E-39 T 14-10-2018 PACID_10110 b486e7283087f94eca104736b80c776d 289 Pfam PF12811 Bax inhibitor 1 like 4 285 5.5E-75 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 PACID_10110 b486e7283087f94eca104736b80c776d 289 PIRSF PIRSF009160 1 287 5.6E-62 T 14-10-2018 IPR010539 Protein of unknown function UCP009160 PACID_25060 ef287ffe379f8967b1c74b157090f70a 772 SUPERFAMILY SSF52540 369 648 5.1E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25060 ef287ffe379f8967b1c74b157090f70a 772 SMART SM00490 551 632 1.8E-30 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_25060 ef287ffe379f8967b1c74b157090f70a 772 SMART SM00487 317 522 6.5E-51 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_25060 ef287ffe379f8967b1c74b157090f70a 772 Gene3D G3DSA:3.40.50.300 262 505 3.1E-70 T 14-10-2018 PACID_25060 ef287ffe379f8967b1c74b157090f70a 772 Gene3D G3DSA:3.40.50.300 517 676 1.7E-42 T 14-10-2018 PACID_25060 ef287ffe379f8967b1c74b157090f70a 772 Pfam PF00271 Helicase conserved C-terminal domain 527 632 1.2E-24 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_25060 ef287ffe379f8967b1c74b157090f70a 772 Pfam PF00270 DEAD/DEAH box helicase 323 491 2.6E-45 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 PACID_31740 9a05913956157df3fc84314fc19fef23 303 SUPERFAMILY SSF161098 26 303 7.38E-68 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31740 9a05913956157df3fc84314fc19fef23 303 Gene3D G3DSA:1.10.3720.10 20 291 5.3E-64 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31740 9a05913956157df3fc84314fc19fef23 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 293 1.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 SUPERFAMILY SSF51735 119 278 8.94E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 Gene3D G3DSA:3.40.50.720 128 267 2.1E-92 T 14-10-2018 PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 SUPERFAMILY SSF50129 8 148 2.74E-33 T 14-10-2018 IPR011032 GroES-like superfamily PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 SMART SM00829 14 328 4.9E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 Pfam PF13602 Zinc-binding dehydrogenase 189 328 7.2E-17 T 14-10-2018 PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 9 329 7.6E-106 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 Gene3D G3DSA:3.90.180.10 24 328 2.1E-92 T 14-10-2018 PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 88 2.8E-9 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_05040 6ad44dac64a7146d20161637d2ddfaa9 333 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 145 166 - T 14-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 PACID_01470 fe7191bba60944d5e7db65ca40f19b6a 99 SMART SM00530 41 96 8.8E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_01470 fe7191bba60944d5e7db65ca40f19b6a 99 Gene3D G3DSA:1.10.260.40 18 97 6.9E-14 T 14-10-2018 PACID_01470 fe7191bba60944d5e7db65ca40f19b6a 99 SUPERFAMILY SSF47413 32 97 7.32E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_01470 fe7191bba60944d5e7db65ca40f19b6a 99 Pfam PF01381 Helix-turn-helix 44 94 1.3E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 214 313 2.1E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 Gene3D G3DSA:3.40.120.10 211 326 2.4E-20 T 14-10-2018 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 297 312 9.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 149 163 9.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 230 249 9.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 SUPERFAMILY SSF53738 48 223 6.67E-41 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 55 191 1.5E-36 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 150 159 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 475 529 1.5E-7 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 SUPERFAMILY SSF55957 429 537 6.93E-9 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 Gene3D G3DSA:3.40.120.10 327 437 1.4E-20 T 14-10-2018 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 SUPERFAMILY SSF53738 212 313 1.49E-21 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 325 433 9.2E-12 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 Gene3D G3DSA:3.40.120.10 45 195 1.4E-42 T 14-10-2018 PACID_24310 1cbd663b51bc484745a3fbde4c2668d7 555 SUPERFAMILY SSF53738 305 440 2.43E-25 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 PACID_24370 b65832514f1ddeb8b8e62bd5d841abdb 411 Gene3D G3DSA:3.40.50.11540 51 205 1.1E-17 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_24370 b65832514f1ddeb8b8e62bd5d841abdb 411 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 46 196 8.0E-34 T 14-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_24370 b65832514f1ddeb8b8e62bd5d841abdb 411 SUPERFAMILY SSF142019 37 213 1.06E-38 T 14-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_25370 f4ee0bf85baf323f439ba53a5f0ae38d 124 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 115 6.4E-49 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25370 f4ee0bf85baf323f439ba53a5f0ae38d 124 ProSitePatterns PS00646 Ribosomal protein S13 signature. 88 101 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25370 f4ee0bf85baf323f439ba53a5f0ae38d 124 PIRSF PIRSF002134 1 124 7.8E-43 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25370 f4ee0bf85baf323f439ba53a5f0ae38d 124 Gene3D G3DSA:4.10.910.10 73 124 1.0E-23 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25370 f4ee0bf85baf323f439ba53a5f0ae38d 124 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 25.878 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25370 f4ee0bf85baf323f439ba53a5f0ae38d 124 Pfam PF00416 Ribosomal protein S13/S18 3 109 1.5E-28 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25370 f4ee0bf85baf323f439ba53a5f0ae38d 124 SUPERFAMILY SSF46946 2 121 1.57E-43 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 PACID_25370 f4ee0bf85baf323f439ba53a5f0ae38d 124 Gene3D G3DSA:1.10.8.50 1 72 5.0E-28 T 14-10-2018 PACID_16920 91335cec6e1dc10014e391f9342aece7 281 Gene3D G3DSA:3.40.1190.20 2 277 2.1E-71 T 14-10-2018 IPR029056 Ribokinase-like PACID_16920 91335cec6e1dc10014e391f9342aece7 281 SUPERFAMILY SSF53613 3 270 1.33E-60 T 14-10-2018 IPR029056 Ribokinase-like PACID_16920 91335cec6e1dc10014e391f9342aece7 281 Pfam PF08543 Phosphomethylpyrimidine kinase 95 258 7.9E-15 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 PACID_16920 91335cec6e1dc10014e391f9342aece7 281 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 4 269 1.7E-68 T 14-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 PACID_10420 4de912ca6068c306214e89e90ff12079 678 SUPERFAMILY SSF52833 2 127 8.54E-28 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_10420 4de912ca6068c306214e89e90ff12079 678 PIRSF PIRSF006402 1 678 1.0E-182 T 14-10-2018 IPR024705 Spermatogenesis-associated protein 20 PACID_10420 4de912ca6068c306214e89e90ff12079 678 Pfam PF03190 Protein of unknown function, DUF255 3 163 7.3E-65 T 14-10-2018 IPR004879 Domain of unknown function DUF255 PACID_10420 4de912ca6068c306214e89e90ff12079 678 Gene3D G3DSA:3.40.30.10 1 171 1.3E-58 T 14-10-2018 PACID_10420 4de912ca6068c306214e89e90ff12079 678 SUPERFAMILY SSF48208 191 513 3.27E-50 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_08560 29bc635c93b311094686dc1b4131c553 541 Gene3D G3DSA:1.20.1250.20 297 521 2.2E-17 T 14-10-2018 PACID_08560 29bc635c93b311094686dc1b4131c553 541 Gene3D G3DSA:1.20.1720.10 49 243 9.7E-49 T 14-10-2018 PACID_08560 29bc635c93b311094686dc1b4131c553 541 SUPERFAMILY SSF103473 34 228 2.88E-47 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_08560 29bc635c93b311094686dc1b4131c553 541 SUPERFAMILY SSF103473 240 519 1.18E-24 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_08560 29bc635c93b311094686dc1b4131c553 541 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 50 459 9.0E-80 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PACID_08560 29bc635c93b311094686dc1b4131c553 541 Pfam PF07690 Major Facilitator Superfamily 53 448 8.6E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_25570 5f639e932e472ff9656385d3093709ab 210 Pfam PF00673 ribosomal L5P family C-terminus 95 188 1.2E-38 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25570 5f639e932e472ff9656385d3093709ab 210 Pfam PF00281 Ribosomal protein L5 35 91 1.5E-25 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25570 5f639e932e472ff9656385d3093709ab 210 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 12 190 42.256 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25570 5f639e932e472ff9656385d3093709ab 210 SUPERFAMILY SSF55282 14 189 1.3E-73 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25570 5f639e932e472ff9656385d3093709ab 210 PIRSF PIRSF002161 8 197 2.6E-61 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25570 5f639e932e472ff9656385d3093709ab 210 Gene3D G3DSA:3.30.1440.10 12 190 2.5E-75 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_13220 b5c838557271456ac5852bfcbc655a74 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 71 2.0E-20 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PACID_13220 b5c838557271456ac5852bfcbc655a74 77 Pfam PF03840 Preprotein translocase SecG subunit 4 70 3.3E-18 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 PACID_20230 81d9a8218153675510aa132aa8f24580 205 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 2.3E-18 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 PACID_20230 81d9a8218153675510aa132aa8f24580 205 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 99 1.0E-15 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 PACID_20230 81d9a8218153675510aa132aa8f24580 205 SUPERFAMILY SSF69754 3 105 1.44E-21 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like PACID_20230 81d9a8218153675510aa132aa8f24580 205 Gene3D G3DSA:3.30.505.50 152 204 1.8E-15 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily PACID_20230 81d9a8218153675510aa132aa8f24580 205 Gene3D G3DSA:3.30.160.100 3 103 3.7E-19 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like PACID_20230 81d9a8218153675510aa132aa8f24580 205 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 144 195 5.0E-17 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 SUPERFAMILY SSF53328 97 291 1.7E-55 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 Gene3D G3DSA:3.40.50.170 96 291 4.2E-67 T 14-10-2018 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 SUPERFAMILY SSF55021 13 93 1.17E-13 T 14-10-2018 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 Gene3D G3DSA:3.30.70.260 10 92 7.0E-20 T 14-10-2018 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 13 291 41.861 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 Pfam PF00551 Formyl transferase 97 273 4.7E-37 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 19 291 3.2E-88 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 PIRSF PIRSF036480 13 292 8.4E-97 T 14-10-2018 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 97 119 1.8E-39 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 18 44 1.8E-39 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 243 265 1.8E-39 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 50 62 1.8E-39 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 119 146 1.8E-39 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 265 290 1.8E-39 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 PACID_24550 fd9b5a0a7a0444dc1201b4621269015d 292 Pfam PF01842 ACT domain 21 61 1.1E-6 T 14-10-2018 IPR002912 ACT domain PACID_34260 34f179b0ec4a01affcf4ce0006d4ac68 284 SUPERFAMILY SSF52540 1 252 5.32E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_34260 34f179b0ec4a01affcf4ce0006d4ac68 284 Gene3D G3DSA:3.40.50.300 1 263 1.1E-77 T 14-10-2018 PACID_34260 34f179b0ec4a01affcf4ce0006d4ac68 284 Pfam PF13614 AAA domain 1 177 1.2E-56 T 14-10-2018 IPR025669 AAA domain PACID_00200 3f7c61f288366e4376b775643f2d31b7 253 PIRSF PIRSF006648 2 253 3.0E-65 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_00200 3f7c61f288366e4376b775643f2d31b7 253 Pfam PF01061 ABC-2 type transporter 9 217 2.5E-22 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PACID_33660 9fe3a981c2e70d8acbffb12801569b56 418 Pfam PF13529 Peptidase_C39 like family 226 365 1.5E-16 T 14-10-2018 IPR039564 Peptidase C39-like PACID_33660 9fe3a981c2e70d8acbffb12801569b56 418 Gene3D G3DSA:3.90.70.10 246 404 1.6E-7 T 14-10-2018 PACID_10030 82c593d5fcf51220b12d076a2d68b049 312 Gene3D G3DSA:3.30.420.40 1 128 3.4E-44 T 14-10-2018 PACID_10030 82c593d5fcf51220b12d076a2d68b049 312 Gene3D G3DSA:3.30.420.150 129 311 1.5E-53 T 14-10-2018 PACID_10030 82c593d5fcf51220b12d076a2d68b049 312 Pfam PF02541 Ppx/GppA phosphatase family 34 310 7.4E-56 T 14-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 PACID_10030 82c593d5fcf51220b12d076a2d68b049 312 SUPERFAMILY SSF53067 6 128 1.17E-30 T 14-10-2018 PACID_10030 82c593d5fcf51220b12d076a2d68b049 312 SUPERFAMILY SSF53067 133 311 1.37E-35 T 14-10-2018 PACID_26020 dd375ef9af8fa82796eb7a877e865cef 155 SUPERFAMILY SSF54637 16 136 1.34E-24 T 14-10-2018 IPR029069 HotDog domain superfamily PACID_26020 dd375ef9af8fa82796eb7a877e865cef 155 Gene3D G3DSA:3.10.129.10 10 145 6.2E-37 T 14-10-2018 PACID_26020 dd375ef9af8fa82796eb7a877e865cef 155 Pfam PF01575 MaoC like domain 20 114 5.0E-22 T 14-10-2018 IPR002539 MaoC-like dehydratase domain PACID_26020 dd375ef9af8fa82796eb7a877e865cef 155 PRINTS PR01483 Fatty acid synthase signature 31 53 2.6E-5 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PACID_26020 dd375ef9af8fa82796eb7a877e865cef 155 PRINTS PR01483 Fatty acid synthase signature 53 74 2.6E-5 T 14-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 PACID_18660 10a5be611edcb280680753ef362d8f9a 597 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 25 47 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 PACID_18660 10a5be611edcb280680753ef362d8f9a 597 Pfam PF00069 Protein kinase domain 22 267 2.5E-47 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_18660 10a5be611edcb280680753ef362d8f9a 597 SUPERFAMILY SSF56112 16 362 2.6E-73 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_18660 10a5be611edcb280680753ef362d8f9a 597 Gene3D G3DSA:1.10.510.10 99 278 8.1E-45 T 14-10-2018 PACID_18660 10a5be611edcb280680753ef362d8f9a 597 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 137 149 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 PACID_18660 10a5be611edcb280680753ef362d8f9a 597 SMART SM00220 19 276 1.7E-60 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 PACID_18660 10a5be611edcb280680753ef362d8f9a 597 Gene3D G3DSA:3.30.200.20 9 97 2.3E-18 T 14-10-2018 PACID_01450 081ac3c797eb76e0f95dff740619bd07 316 Gene3D G3DSA:3.40.50.300 83 314 5.8E-64 T 14-10-2018 PACID_01450 081ac3c797eb76e0f95dff740619bd07 316 SUPERFAMILY SSF52540 84 298 7.18E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01450 081ac3c797eb76e0f95dff740619bd07 316 SMART SM00382 108 294 3.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_01450 081ac3c797eb76e0f95dff740619bd07 316 Pfam PF00005 ABC transporter 99 245 3.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_26850 3074aaf1638e357d40ea79c8bd421e66 397 Gene3D G3DSA:3.40.50.2000 2 208 2.1E-81 T 14-10-2018 PACID_26850 3074aaf1638e357d40ea79c8bd421e66 397 Gene3D G3DSA:3.40.50.2000 209 380 2.1E-81 T 14-10-2018 PACID_26850 3074aaf1638e357d40ea79c8bd421e66 397 SUPERFAMILY SSF53756 2 394 4.32E-65 T 14-10-2018 PACID_06630 309d94e5c95b645cb834fea51f89bb7f 200 SUPERFAMILY SSF51735 1 197 1.42E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_06630 309d94e5c95b645cb834fea51f89bb7f 200 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 32 160 1.6E-12 T 14-10-2018 PACID_06630 309d94e5c95b645cb834fea51f89bb7f 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_06630 309d94e5c95b645cb834fea51f89bb7f 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 162 1.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_06630 309d94e5c95b645cb834fea51f89bb7f 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 145 1.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_06630 309d94e5c95b645cb834fea51f89bb7f 200 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 55 66 1.7E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_06630 309d94e5c95b645cb834fea51f89bb7f 200 Gene3D G3DSA:3.40.50.720 1 199 6.1E-31 T 14-10-2018 PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 Pfam PF00248 Aldo/keto reductase family 17 260 1.8E-37 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 SUPERFAMILY SSF51430 5 265 3.27E-78 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 PIRSF PIRSF000097 3 116 2.3E-25 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 PIRSF PIRSF000097 113 273 5.1E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 PRINTS PR00069 Aldo-keto reductase signature 158 187 2.3E-36 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 PRINTS PR00069 Aldo-keto reductase signature 196 220 2.3E-36 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 PRINTS PR00069 Aldo-keto reductase signature 36 60 2.3E-36 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 PRINTS PR00069 Aldo-keto reductase signature 124 141 2.3E-36 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 PRINTS PR00069 Aldo-keto reductase signature 92 110 2.3E-36 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_17010 43e188ed9972ed43df17d3b0b2ec164b 278 Gene3D G3DSA:3.20.20.100 1 272 8.3E-89 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_28530 fc59b1d7576f6ef10d9da3170acf82a8 179 SUPERFAMILY SSF50324 9 167 5.49E-54 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PACID_28530 fc59b1d7576f6ef10d9da3170acf82a8 179 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 61 67 - T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PACID_28530 fc59b1d7576f6ef10d9da3170acf82a8 179 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 10 167 30.826 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PACID_28530 fc59b1d7576f6ef10d9da3170acf82a8 179 Pfam PF00719 Inorganic pyrophosphatase 14 166 3.3E-50 T 14-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PACID_28530 fc59b1d7576f6ef10d9da3170acf82a8 179 Gene3D G3DSA:3.90.80.10 6 170 1.2E-61 T 14-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 PACID_20680 0450e2e4a765331b04146ed6c8592b01 130 SUPERFAMILY SSF54197 1 115 5.1E-35 T 14-10-2018 IPR036265 HIT-like superfamily PACID_20680 0450e2e4a765331b04146ed6c8592b01 130 Pfam PF01230 HIT domain 12 105 4.7E-20 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_20680 0450e2e4a765331b04146ed6c8592b01 130 Gene3D G3DSA:3.30.428.10 1 128 3.9E-35 T 14-10-2018 IPR036265 HIT-like superfamily PACID_20680 0450e2e4a765331b04146ed6c8592b01 130 ProSitePatterns PS00892 HIT domain signature. 84 102 - T 14-10-2018 IPR019808 Histidine triad, conserved site PACID_20680 0450e2e4a765331b04146ed6c8592b01 130 PRINTS PR00332 Histidine triad family signature 91 101 1.4E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_20680 0450e2e4a765331b04146ed6c8592b01 130 PRINTS PR00332 Histidine triad family signature 4 20 1.4E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_20680 0450e2e4a765331b04146ed6c8592b01 130 PRINTS PR00332 Histidine triad family signature 25 43 1.4E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein PACID_00030 c1770b9fae5bda1c3fd104f754f6e5fe 894 Pfam PF12704 MacB-like periplasmic core domain 17 267 8.1E-11 T 14-10-2018 IPR025857 MacB-like periplasmic core domain PACID_00030 c1770b9fae5bda1c3fd104f754f6e5fe 894 Pfam PF12704 MacB-like periplasmic core domain 523 737 7.7E-13 T 14-10-2018 IPR025857 MacB-like periplasmic core domain PACID_00030 c1770b9fae5bda1c3fd104f754f6e5fe 894 Pfam PF02687 FtsX-like permease family 328 423 8.0E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_00030 c1770b9fae5bda1c3fd104f754f6e5fe 894 Pfam PF02687 FtsX-like permease family 796 886 3.6E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_26140 8605462e7fc8ed9e283409722dcdb77c 149 SUPERFAMILY SSF56770 3 145 7.59E-17 T 14-10-2018 PACID_26140 8605462e7fc8ed9e283409722dcdb77c 149 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 39 138 2.6E-11 T 14-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26140 8605462e7fc8ed9e283409722dcdb77c 149 Gene3D G3DSA:3.40.50.12280 2 147 2.8E-23 T 14-10-2018 PACID_11070 8186436496e5dbe66b84eb33626f9e4b 261 Gene3D G3DSA:1.40.20.10 4 260 7.9E-31 T 14-10-2018 IPR038186 CHAD domain superfamily PACID_11070 8186436496e5dbe66b84eb33626f9e4b 261 Pfam PF05235 CHAD domain 14 222 5.3E-30 T 14-10-2018 IPR007899 CHAD domain PACID_11070 8186436496e5dbe66b84eb33626f9e4b 261 SMART SM00880 13 251 7.1E-20 T 14-10-2018 IPR007899 CHAD domain PACID_27170 96d605b5b7a641df3b615f87df6f7d6c 789 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 285 728 3.0E-60 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_27170 96d605b5b7a641df3b615f87df6f7d6c 789 Gene3D G3DSA:1.20.210.10 221 756 1.1E-159 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_27170 96d605b5b7a641df3b615f87df6f7d6c 789 SUPERFAMILY SSF81442 273 754 2.62E-75 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_32900 3ec5bd995afc3f08184de4a0356e2b66 459 SUPERFAMILY SSF53850 40 458 3.83E-53 T 14-10-2018 PACID_32900 3ec5bd995afc3f08184de4a0356e2b66 459 Pfam PF01547 Bacterial extracellular solute-binding protein 50 364 4.5E-27 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_32900 3ec5bd995afc3f08184de4a0356e2b66 459 Gene3D G3DSA:3.40.190.10 35 456 6.7E-60 T 14-10-2018 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 2.6E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 PRINTS PR00981 Seryl-tRNA synthetase signature 332 348 2.6E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 PRINTS PR00981 Seryl-tRNA synthetase signature 350 366 2.6E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 PRINTS PR00981 Seryl-tRNA synthetase signature 315 328 2.6E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 2.6E-29 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 419 37.034 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 Gene3D G3DSA:1.10.287.40 1 102 4.8E-20 T 14-10-2018 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 PIRSF PIRSF001529 1 421 2.9E-134 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 106 1.4E-21 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 SUPERFAMILY SSF55681 132 415 2.62E-80 T 14-10-2018 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 Gene3D G3DSA:3.30.930.10 104 421 1.1E-113 T 14-10-2018 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 222 397 2.7E-23 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 414 6.0E-126 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 PACID_31020 68afaf2ba39ec4912545a71d31f8ac84 421 SUPERFAMILY SSF46589 1 111 1.2E-22 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 PACID_14310 67eb789448c02657cebde200aeb7e259 384 SUPERFAMILY SSF52540 134 301 3.9E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14310 67eb789448c02657cebde200aeb7e259 384 Pfam PF02562 PhoH-like protein 142 345 7.3E-93 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 PACID_14310 67eb789448c02657cebde200aeb7e259 384 Gene3D G3DSA:3.40.50.300 138 345 2.0E-74 T 14-10-2018 PACID_18850 c274d1d7275c1b225b9bd8a81984d967 211 Pfam PF02796 Helix-turn-helix domain of resolvase 143 180 2.8E-8 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 PACID_18850 c274d1d7275c1b225b9bd8a81984d967 211 ProSitePatterns PS00397 Site-specific recombinases active site. 11 19 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 PACID_18850 c274d1d7275c1b225b9bd8a81984d967 211 SUPERFAMILY SSF46689 143 183 2.39E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_18850 c274d1d7275c1b225b9bd8a81984d967 211 SMART SM00857 8 141 1.6E-50 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PACID_18850 c274d1d7275c1b225b9bd8a81984d967 211 SUPERFAMILY SSF53041 8 141 2.35E-39 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PACID_18850 c274d1d7275c1b225b9bd8a81984d967 211 Gene3D G3DSA:1.10.10.10 143 183 2.1E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_18850 c274d1d7275c1b225b9bd8a81984d967 211 Pfam PF00239 Resolvase, N terminal domain 9 141 7.9E-40 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PACID_18850 c274d1d7275c1b225b9bd8a81984d967 211 Gene3D G3DSA:3.40.50.1390 8 129 1.0E-38 T 14-10-2018 PACID_16980 199afb4690e56e94bd012d4db0afc874 205 Pfam PF07021 Methionine biosynthesis protein MetW 8 198 2.0E-59 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 PACID_16980 199afb4690e56e94bd012d4db0afc874 205 TIGRFAM TIGR02081 metW: methionine biosynthesis protein MetW 8 198 4.2E-63 T 14-10-2018 IPR010743 Methionine biosynthesis MetW KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 PACID_16980 199afb4690e56e94bd012d4db0afc874 205 SUPERFAMILY SSF53335 13 176 6.97E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_16980 199afb4690e56e94bd012d4db0afc874 205 Gene3D G3DSA:3.40.50.150 10 174 5.7E-27 T 14-10-2018 PACID_07640 5151e52f965d465aa07be265fd36727d 337 Gene3D G3DSA:3.40.190.10 73 329 9.1E-76 T 14-10-2018 PACID_07640 5151e52f965d465aa07be265fd36727d 337 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 70 320 9.7E-50 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PACID_07640 5151e52f965d465aa07be265fd36727d 337 Gene3D G3DSA:3.40.190.100 153 261 9.1E-76 T 14-10-2018 PACID_07640 5151e52f965d465aa07be265fd36727d 337 SUPERFAMILY SSF53850 67 335 1.97E-65 T 14-10-2018 PACID_06170 8efcffe58815cced751c36b3ce99b6d7 105 SUPERFAMILY SSF55729 22 104 1.5E-10 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_06170 8efcffe58815cced751c36b3ce99b6d7 105 Gene3D G3DSA:3.40.630.30 20 105 1.7E-14 T 14-10-2018 PACID_06170 8efcffe58815cced751c36b3ce99b6d7 105 Pfam PF14542 GCN5-related N-acetyl-transferase 27 103 2.7E-11 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase PACID_09100 29f086e272baa7ad0e9e4a275098c365 297 Pfam PF02517 CAAX protease self-immunity 140 230 2.0E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 PACID_18740 d77bf079113f622a4bfdd08456e823a7 255 Pfam PF13614 AAA domain 2 178 1.4E-41 T 14-10-2018 IPR025669 AAA domain PACID_18740 d77bf079113f622a4bfdd08456e823a7 255 Gene3D G3DSA:3.40.50.300 1 255 5.8E-64 T 14-10-2018 PACID_18740 d77bf079113f622a4bfdd08456e823a7 255 SUPERFAMILY SSF52540 2 252 2.08E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_12060 19e0782f86d5023c729f1162f8679e03 149 SMART SM00116 13 61 6.0E-7 T 14-10-2018 IPR000644 CBS domain PACID_12060 19e0782f86d5023c729f1162f8679e03 149 SMART SM00116 78 125 2.9E-12 T 14-10-2018 IPR000644 CBS domain PACID_12060 19e0782f86d5023c729f1162f8679e03 149 Gene3D G3DSA:3.10.580.10 1 141 7.9E-40 T 14-10-2018 PACID_12060 19e0782f86d5023c729f1162f8679e03 149 SUPERFAMILY SSF54631 2 140 3.79E-32 T 14-10-2018 PACID_12060 19e0782f86d5023c729f1162f8679e03 149 Pfam PF00571 CBS domain 71 122 2.9E-12 T 14-10-2018 IPR000644 CBS domain PACID_12060 19e0782f86d5023c729f1162f8679e03 149 Pfam PF00571 CBS domain 13 61 2.4E-9 T 14-10-2018 IPR000644 CBS domain PACID_24590 e568dc303631f9e5bd426fb7788aacea 98 Pfam PF11222 Protein of unknown function (DUF3017) 18 89 9.1E-21 T 14-10-2018 IPR021385 Protein of unknown function DUF3017 PACID_00640 96af3ef7fe32d785a03ebcedc8720a85 326 SUPERFAMILY SSF53300 93 265 5.64E-18 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_00640 96af3ef7fe32d785a03ebcedc8720a85 326 SMART SM00327 95 278 8.4E-5 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_00640 96af3ef7fe32d785a03ebcedc8720a85 326 Gene3D G3DSA:3.40.50.410 94 279 2.3E-22 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_00640 96af3ef7fe32d785a03ebcedc8720a85 326 Pfam PF00092 von Willebrand factor type A domain 97 264 4.0E-10 T 14-10-2018 IPR002035 von Willebrand factor, type A PACID_32890 74091f44466b981a6fd5905b0c64fb1e 165 PIRSF PIRSF006181 4 165 6.4E-51 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PACID_32890 74091f44466b981a6fd5905b0c64fb1e 165 Gene3D G3DSA:3.90.960.10 2 165 9.6E-59 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_32890 74091f44466b981a6fd5905b0c64fb1e 165 Pfam PF04073 Aminoacyl-tRNA editing domain 37 154 8.1E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PACID_32890 74091f44466b981a6fd5905b0c64fb1e 165 SUPERFAMILY SSF55826 9 163 2.49E-41 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_32890 74091f44466b981a6fd5905b0c64fb1e 165 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 9 164 1.9E-51 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC PACID_11150 386582b074ebf5e1bc834d88e07e8724 495 ProSitePatterns PS00218 Amino acid permeases signature. 58 89 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PACID_11150 386582b074ebf5e1bc834d88e07e8724 495 Pfam PF00324 Amino acid permease 33 487 5.1E-138 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PACID_11150 386582b074ebf5e1bc834d88e07e8724 495 PIRSF PIRSF006060 7 487 4.3E-83 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_11150 386582b074ebf5e1bc834d88e07e8724 495 Gene3D G3DSA:1.20.1740.10 26 481 4.5E-62 T 14-10-2018 PACID_14140 f4478830352a3ce2070a76a192db54f0 137 Pfam PF07681 DoxX 6 98 9.9E-9 T 14-10-2018 IPR032808 DoxX family PACID_25750 d1a8ee03984fdaa232d01eab9a35741e 297 Gene3D G3DSA:3.40.1370.10 3 213 2.6E-74 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25750 d1a8ee03984fdaa232d01eab9a35741e 297 SUPERFAMILY SSF52166 6 207 1.19E-75 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25750 d1a8ee03984fdaa232d01eab9a35741e 297 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 12 211 34.41 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25750 d1a8ee03984fdaa232d01eab9a35741e 297 Pfam PF00573 Ribosomal protein L4/L1 family 20 206 5.2E-65 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 PACID_25750 d1a8ee03984fdaa232d01eab9a35741e 297 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 20 206 1.3E-72 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_05800 1ba7f4a92137e4809497b7edbdb9ff18 314 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 2.0E-7 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_05800 1ba7f4a92137e4809497b7edbdb9ff18 314 Gene3D G3DSA:3.90.180.10 9 298 1.0E-56 T 14-10-2018 PACID_05800 1ba7f4a92137e4809497b7edbdb9ff18 314 SMART SM00829 11 300 7.7E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_05800 1ba7f4a92137e4809497b7edbdb9ff18 314 Pfam PF13602 Zinc-binding dehydrogenase 253 300 1.5E-9 T 14-10-2018 PACID_05800 1ba7f4a92137e4809497b7edbdb9ff18 314 SUPERFAMILY SSF50129 4 147 1.52E-25 T 14-10-2018 IPR011032 GroES-like superfamily PACID_05800 1ba7f4a92137e4809497b7edbdb9ff18 314 SUPERFAMILY SSF51735 114 212 1.61E-16 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_05800 1ba7f4a92137e4809497b7edbdb9ff18 314 Gene3D G3DSA:3.40.50.720 124 251 1.0E-56 T 14-10-2018 PACID_23200 b3bef32a9514e6ba149aebac9742e571 621 Gene3D G3DSA:3.40.50.12780 8 323 1.7E-52 T 14-10-2018 PACID_23200 b3bef32a9514e6ba149aebac9742e571 621 SUPERFAMILY SSF56801 13 615 5.36E-119 T 14-10-2018 PACID_23200 b3bef32a9514e6ba149aebac9742e571 621 Gene3D G3DSA:3.40.50.12780 329 481 4.2E-38 T 14-10-2018 PACID_23200 b3bef32a9514e6ba149aebac9742e571 621 Pfam PF00501 AMP-binding enzyme 19 483 3.0E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PACID_23200 b3bef32a9514e6ba149aebac9742e571 621 ProSitePatterns PS00455 Putative AMP-binding domain signature. 203 214 - T 14-10-2018 IPR020845 AMP-binding, conserved site PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 178 2.2E-73 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 SUPERFAMILY SSF56053 1 83 5.37E-26 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 PRINTS PR00059 Ribosomal protein L6 signature 143 164 1.4E-30 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 PRINTS PR00059 Ribosomal protein L6 signature 72 97 1.4E-30 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 PRINTS PR00059 Ribosomal protein L6 signature 101 117 1.4E-30 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 156 164 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 Gene3D G3DSA:3.90.930.12 84 180 1.8E-38 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 Gene3D G3DSA:3.90.930.12 1 83 9.2E-31 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 Pfam PF00347 Ribosomal protein L6 11 83 2.2E-18 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 Pfam PF00347 Ribosomal protein L6 92 166 3.5E-17 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 SUPERFAMILY SSF56053 84 178 2.62E-33 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 178 38.397 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 PACID_25540 c0ac9ef61f714377138b854155d59f0d 180 PIRSF PIRSF002162 1 179 1.7E-47 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_08570 b1cfd90eaa75f0601ea4d8a365ddf669 182 SUPERFAMILY SSF55729 12 168 4.56E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_08570 b1cfd90eaa75f0601ea4d8a365ddf669 182 Gene3D G3DSA:3.40.630.30 3 172 2.6E-23 T 14-10-2018 PACID_08570 b1cfd90eaa75f0601ea4d8a365ddf669 182 Pfam PF13302 Acetyltransferase (GNAT) domain 12 137 7.5E-13 T 14-10-2018 IPR000182 GNAT domain PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1 173 2.2E-6 T 14-10-2018 PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 124 152 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 SUPERFAMILY SSF51735 1 229 1.66E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 227 1.4E-57 T 14-10-2018 PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 Gene3D G3DSA:3.40.50.720 1 231 4.4E-79 T 14-10-2018 PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 64 75 6.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 156 6.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 117 125 6.1E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 156 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 175 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 111 127 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 64 75 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 191 211 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_22310 857f71fb9a3ec3667e04922889a77a69 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 1 16 2.0E-41 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 Gene3D G3DSA:3.10.150.10 123 253 5.2E-33 T 14-10-2018 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 118 1.2E-29 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 SUPERFAMILY SSF55979 2 118 5.56E-20 T 14-10-2018 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 259 367 6.7E-21 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 Gene3D G3DSA:3.10.150.10 257 386 1.2E-32 T 14-10-2018 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 SUPERFAMILY SSF55979 127 253 5.32E-18 T 14-10-2018 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 Pfam PF02767 DNA polymerase III beta subunit, central domain 127 250 3.3E-28 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 SMART SM00480 17 380 4.8E-94 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 SUPERFAMILY SSF55979 259 384 4.35E-18 T 14-10-2018 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 Gene3D G3DSA:3.10.150.10 1 121 3.9E-39 T 14-10-2018 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 PIRSF PIRSF000804 1 385 2.1E-81 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PACID_00050 1d87ee6cdf67659fa6faad704e55fc3c 386 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 384 2.1E-76 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 PACID_23800 852e1ad92bbfa63f360f893c7d8ce313 192 Gene3D G3DSA:3.40.430.10 2 189 1.7E-35 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_23800 852e1ad92bbfa63f360f893c7d8ce313 192 Pfam PF01872 RibD C-terminal domain 3 186 9.0E-14 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PACID_23800 852e1ad92bbfa63f360f893c7d8ce313 192 SUPERFAMILY SSF53597 3 191 2.09E-29 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_01870 20e17c6c66fa57987c69071a48f297f3 316 Gene3D G3DSA:3.40.50.1820 10 315 2.9E-47 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_01870 20e17c6c66fa57987c69071a48f297f3 316 Pfam PF12697 Alpha/beta hydrolase family 49 311 1.4E-18 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_01870 20e17c6c66fa57987c69071a48f297f3 316 SUPERFAMILY SSF53474 37 314 1.02E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_15660 790d52ae3660d86d2360715a97df8f4b 162 SUPERFAMILY SSF103084 20 135 2.75E-12 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 PACID_15660 790d52ae3660d86d2360715a97df8f4b 162 Gene3D G3DSA:3.30.1330.70 21 140 1.4E-7 T 14-10-2018 IPR036614 Holliday junction resolvase RusA-like superfamily GO:0000287|GO:0006281|GO:0006310 PACID_15660 790d52ae3660d86d2360715a97df8f4b 162 Pfam PF05866 Endodeoxyribonuclease RusA 8 139 1.4E-12 T 14-10-2018 IPR008822 Holliday junction resolvase RusA-like GO:0000287|GO:0006281|GO:0006310 PACID_28320 67e5c9cdb5ec2922d1b5a3e4d8257426 215 Gene3D G3DSA:3.40.50.720 4 212 1.2E-25 T 14-10-2018 PACID_28320 67e5c9cdb5ec2922d1b5a3e4d8257426 215 SUPERFAMILY SSF51735 8 208 2.51E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_28320 67e5c9cdb5ec2922d1b5a3e4d8257426 215 Pfam PF13460 NAD(P)H-binding 14 200 3.7E-20 T 14-10-2018 IPR016040 NAD(P)-binding domain PACID_28690 9b448ed9ca845e18c6d066f4867559d5 344 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 342 2.3E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_28690 9b448ed9ca845e18c6d066f4867559d5 344 Gene3D G3DSA:1.10.3720.10 108 339 5.8E-24 T 14-10-2018 IPR035906 MetI-like superfamily PACID_28690 9b448ed9ca845e18c6d066f4867559d5 344 SUPERFAMILY SSF161098 114 330 2.49E-17 T 14-10-2018 IPR035906 MetI-like superfamily PACID_21760 46207750fabf774c5316c37ca84bbc47 192 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 2 177 2.5E-81 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 PACID_21760 46207750fabf774c5316c37ca84bbc47 192 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 170 1.7E-77 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 PACID_21760 46207750fabf774c5316c37ca84bbc47 192 PIRSF PIRSF038321 1 181 4.1E-89 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 PACID_06500 b8c7108e8d047417d11d83240d59ea74 504 Pfam PF03703 Bacterial PH domain 90 166 1.7E-11 T 14-10-2018 IPR005182 Domain of unknown function DUF304 PACID_06500 b8c7108e8d047417d11d83240d59ea74 504 Pfam PF03703 Bacterial PH domain 403 466 9.5E-12 T 14-10-2018 IPR005182 Domain of unknown function DUF304 PACID_06500 b8c7108e8d047417d11d83240d59ea74 504 Pfam PF03703 Bacterial PH domain 289 338 8.9E-5 T 14-10-2018 IPR005182 Domain of unknown function DUF304 PACID_06500 b8c7108e8d047417d11d83240d59ea74 504 PIRSF PIRSF026631 22 483 1.6E-62 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 SUPERFAMILY SSF103473 13 454 8.89E-75 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 PRINTS PR00171 Sugar transporter signature 270 280 4.8E-28 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 PRINTS PR00171 Sugar transporter signature 381 393 4.8E-28 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 PRINTS PR00171 Sugar transporter signature 111 130 4.8E-28 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 PRINTS PR00171 Sugar transporter signature 358 379 4.8E-28 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 PRINTS PR00171 Sugar transporter signature 23 33 4.8E-28 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 Pfam PF00083 Sugar (and other) transporter 18 455 6.6E-115 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 Gene3D G3DSA:1.20.1250.20 9 456 1.4E-124 T 14-10-2018 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 14 453 2.7E-109 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_21130 0065567f18f714b5f10321b7d18f81b9 466 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 89 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_13970 e6b7fc585608c8bb61107862e5b128d8 307 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_13970 e6b7fc585608c8bb61107862e5b128d8 307 SMART SM00382 30 225 7.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_13970 e6b7fc585608c8bb61107862e5b128d8 307 Pfam PF00005 ABC transporter 21 160 4.7E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_13970 e6b7fc585608c8bb61107862e5b128d8 307 Gene3D G3DSA:3.40.50.300 1 230 2.0E-56 T 14-10-2018 PACID_13970 e6b7fc585608c8bb61107862e5b128d8 307 SUPERFAMILY SSF52540 5 219 1.41E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_29590 acaedb196fb03a07a73e7c1d15cbedfd 167 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 49 130 1.2E-8 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_29590 acaedb196fb03a07a73e7c1d15cbedfd 167 Gene3D G3DSA:3.40.190.10 42 153 6.1E-12 T 14-10-2018 PACID_29590 acaedb196fb03a07a73e7c1d15cbedfd 167 SUPERFAMILY SSF53850 16 131 3.46E-12 T 14-10-2018 PACID_24100 ac2e725dfd0019988c296232bd54c7d3 256 SUPERFAMILY SSF56801 42 179 4.58E-5 T 14-10-2018 PACID_02220 c80bca571044994a06b9ba336d9716db 282 SMART SM00382 62 266 5.0E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_02220 c80bca571044994a06b9ba336d9716db 282 Gene3D G3DSA:3.40.50.300 37 281 1.4E-60 T 14-10-2018 PACID_02220 c80bca571044994a06b9ba336d9716db 282 Pfam PF00005 ABC transporter 54 210 7.1E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_02220 c80bca571044994a06b9ba336d9716db 282 SUPERFAMILY SSF52540 36 265 1.81E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_11870 b7a426f0a751e6764dd4679b740e6830 457 Gene3D G3DSA:1.20.1740.10 23 448 5.8E-63 T 14-10-2018 PACID_11870 b7a426f0a751e6764dd4679b740e6830 457 PIRSF PIRSF006060 3 456 6.6E-67 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_11870 b7a426f0a751e6764dd4679b740e6830 457 Pfam PF13520 Amino acid permease 33 420 4.0E-37 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_14900 a9cad5329c93b6d7cf96a1ded6a91a40 352 Pfam PF01882 Protein of unknown function DUF58 70 155 1.3E-13 T 14-10-2018 IPR002881 Domain of unknown function DUF58 PACID_24900 ba82356df3923c2c458da79930f33b2c 367 TIGRFAM TIGR01304 IMP_DH_rel_2: IMP dehydrogenase family protein 3 365 3.6E-173 T 14-10-2018 IPR005992 IMP dehydrogenase-related 2 GO:0016491|GO:0055114 PACID_24900 ba82356df3923c2c458da79930f33b2c 367 SUPERFAMILY SSF51412 9 364 3.79E-71 T 14-10-2018 PACID_24900 ba82356df3923c2c458da79930f33b2c 367 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 14 297 1.1E-39 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 PACID_24900 ba82356df3923c2c458da79930f33b2c 367 SMART SM01240 12 367 3.0E-24 T 14-10-2018 PACID_24900 ba82356df3923c2c458da79930f33b2c 367 Gene3D G3DSA:3.20.20.70 13 367 4.4E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_34240 b54d8f399fb8571d8734608b49c6155c 206 Pfam PF13298 DNA polymerase Ligase (LigD) 80 167 5.8E-23 T 14-10-2018 IPR014144 DNA ligase D, 3'-phosphoesterase domain PACID_30380 d5131548b8b09e3ea621ef8c4c7cda30 447 Gene3D G3DSA:3.90.50.10 6 115 2.5E-7 T 14-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 PACID_30380 d5131548b8b09e3ea621ef8c4c7cda30 447 SUPERFAMILY SSF50346 10 106 2.98E-17 T 14-10-2018 IPR011033 PRC-barrel-like superfamily PACID_13990 f2a3f6c40e12f7edbdbdc2f3d516f4fd 451 Gene3D G3DSA:1.20.1250.20 21 439 1.3E-49 T 14-10-2018 PACID_13990 f2a3f6c40e12f7edbdbdc2f3d516f4fd 451 Pfam PF07690 Major Facilitator Superfamily 69 393 1.4E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_13990 f2a3f6c40e12f7edbdbdc2f3d516f4fd 451 SUPERFAMILY SSF103473 19 435 1.27E-55 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_10970 b34818e8f581d77767289e5481869b98 148 Gene3D G3DSA:3.10.490.10 2 137 1.3E-5 T 14-10-2018 PACID_19070 b80406815d7593154a9cb4d8f465ab1a 331 SUPERFAMILY SSF51726 90 322 1.57E-18 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PACID_19070 b80406815d7593154a9cb4d8f465ab1a 331 Gene3D G3DSA:3.20.20.210 69 330 2.3E-22 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PACID_19070 b80406815d7593154a9cb4d8f465ab1a 331 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 93 323 5.5E-13 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 PACID_14420 a4d5fc4f7d158ae009de2d275efaf1ed 270 Gene3D G3DSA:3.60.20.10 1 248 1.1E-33 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_14420 a4d5fc4f7d158ae009de2d275efaf1ed 270 SUPERFAMILY SSF56235 2 160 1.21E-23 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_14420 a4d5fc4f7d158ae009de2d275efaf1ed 270 Pfam PF13230 Glutamine amidotransferases class-II 1 185 6.3E-17 T 14-10-2018 IPR026869 Putative glutamine amidotransferase type 2 PACID_31300 b1d0f4f91b9f317edf4505b29436f682 165 SUPERFAMILY SSF50891 7 147 5.69E-9 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily PACID_31300 b1d0f4f91b9f317edf4505b29436f682 165 Gene3D G3DSA:2.40.100.20 2 165 9.3E-54 T 14-10-2018 PACID_31300 b1d0f4f91b9f317edf4505b29436f682 165 Pfam PF12903 Protein of unknown function (DUF3830) 7 163 7.1E-59 T 14-10-2018 IPR024532 Protein of unknown function DUF3830 PACID_23020 56cbbcf13cdb9f373534534b59117cb5 274 Pfam PF12697 Alpha/beta hydrolase family 26 268 4.9E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_23020 56cbbcf13cdb9f373534534b59117cb5 274 SUPERFAMILY SSF53474 16 272 7.16E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_23020 56cbbcf13cdb9f373534534b59117cb5 274 Gene3D G3DSA:3.40.50.1820 9 273 5.8E-28 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_08240 2cd26bed77ac023d5ffe2ab85a59669f 345 Gene3D G3DSA:3.40.50.720 65 338 1.0E-93 T 14-10-2018 PACID_08240 2cd26bed77ac023d5ffe2ab85a59669f 345 SUPERFAMILY SSF52283 62 161 2.46E-23 T 14-10-2018 PACID_08240 2cd26bed77ac023d5ffe2ab85a59669f 345 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 67 134 7.5E-17 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 PACID_08240 2cd26bed77ac023d5ffe2ab85a59669f 345 Gene3D G3DSA:3.40.50.720 124 314 1.0E-93 T 14-10-2018 PACID_08240 2cd26bed77ac023d5ffe2ab85a59669f 345 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 175 202 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 PACID_08240 2cd26bed77ac023d5ffe2ab85a59669f 345 SUPERFAMILY SSF51735 127 314 8.4E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_08240 2cd26bed77ac023d5ffe2ab85a59669f 345 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 135 313 4.4E-62 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PACID_02670 d8ef064325cc5d5bd150023571060c8d 241 SUPERFAMILY SSF103473 21 235 7.32E-24 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_02670 d8ef064325cc5d5bd150023571060c8d 241 Pfam PF07690 Major Facilitator Superfamily 40 235 1.2E-13 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_02670 d8ef064325cc5d5bd150023571060c8d 241 Gene3D G3DSA:1.20.1250.20 3 232 6.7E-62 T 14-10-2018 PACID_24720 f8383187d033ab2f1c5a13432ad8f252 405 Gene3D G3DSA:2.70.70.10 171 400 6.4E-32 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_24720 f8383187d033ab2f1c5a13432ad8f252 405 SUPERFAMILY SSF51261 187 383 4.66E-36 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_24720 f8383187d033ab2f1c5a13432ad8f252 405 Pfam PF01551 Peptidase family M23 294 382 1.3E-22 T 14-10-2018 IPR016047 Peptidase M23 PACID_24360 8e8de89a79c01d4e4690842374778bef 408 Gene3D G3DSA:3.90.1150.10 30 393 6.0E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_24360 8e8de89a79c01d4e4690842374778bef 408 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 20 400 5.5E-131 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 PACID_24360 8e8de89a79c01d4e4690842374778bef 408 Pfam PF00202 Aminotransferase class-III 30 400 4.8E-107 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_24360 8e8de89a79c01d4e4690842374778bef 408 SUPERFAMILY SSF53383 20 401 2.23E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_24360 8e8de89a79c01d4e4690842374778bef 408 Gene3D G3DSA:3.40.640.10 64 311 6.0E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_24360 8e8de89a79c01d4e4690842374778bef 408 PIRSF PIRSF000521 129 161 0.092 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_24360 8e8de89a79c01d4e4690842374778bef 408 PIRSF PIRSF000521 177 403 1.0E-34 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_24360 8e8de89a79c01d4e4690842374778bef 408 PIRSF PIRSF000521 9 130 2.5E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_10510 5b40f20c76b748a6adecb9e00416704b 248 SUPERFAMILY SSF52540 3 221 1.44E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_10510 5b40f20c76b748a6adecb9e00416704b 248 Pfam PF00005 ABC transporter 23 169 3.5E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_10510 5b40f20c76b748a6adecb9e00416704b 248 SMART SM00382 32 217 2.7E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_10510 5b40f20c76b748a6adecb9e00416704b 248 Gene3D G3DSA:3.40.50.300 2 244 8.4E-59 T 14-10-2018 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 SMART SM00387 217 340 3.9E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 318 4.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 324 337 4.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 292 4.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 264 278 4.3E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 Pfam PF00512 His Kinase A (phospho-acceptor) domain 106 170 5.5E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 SMART SM00388 105 171 8.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 SUPERFAMILY SSF55874 182 338 4.45E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 Gene3D G3DSA:1.10.287.130 89 170 5.9E-14 T 14-10-2018 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 SUPERFAMILY SSF47384 93 171 1.67E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 Gene3D G3DSA:3.30.565.10 180 340 5.1E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_30050 5175eadfd7ba05b6021172cb9bbfd28f 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 221 339 9.6E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_04710 5bdfcb9e312b1ae010d4fb2915b0873e 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 116 142 8.2E-4 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_04710 5bdfcb9e312b1ae010d4fb2915b0873e 203 Gene3D G3DSA:2.160.10.10 3 160 8.5E-39 T 14-10-2018 PACID_04710 5bdfcb9e312b1ae010d4fb2915b0873e 203 SUPERFAMILY SSF51161 5 163 6.17E-41 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_04710 5bdfcb9e312b1ae010d4fb2915b0873e 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 51 86 2.2E-6 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_04710 5bdfcb9e312b1ae010d4fb2915b0873e 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 15 49 1.3E-6 T 14-10-2018 IPR001451 Hexapeptide repeat PACID_18430 5f316da421e0abfd3d5653fc821784c3 431 Pfam PF01844 HNH endonuclease 290 317 4.8E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PACID_18430 5f316da421e0abfd3d5653fc821784c3 431 SMART SM00507 268 320 2.7E-9 T 14-10-2018 IPR003615 HNH nuclease PACID_18430 5f316da421e0abfd3d5653fc821784c3 431 Gene3D G3DSA:3.30.40.60 254 319 3.2E-5 T 14-10-2018 PACID_18430 5f316da421e0abfd3d5653fc821784c3 431 Pfam PF02720 Domain of unknown function (DUF222) 3 277 4.4E-15 T 14-10-2018 IPR003870 Domain of unknown function DUF222 PACID_01310 a5342d18d8a3098d84faa1146308db72 943 Gene3D G3DSA:3.10.350.10 249 297 6.1E-10 T 14-10-2018 IPR036779 LysM domain superfamily PACID_01310 a5342d18d8a3098d84faa1146308db72 943 Gene3D G3DSA:3.10.350.10 170 219 1.8E-11 T 14-10-2018 IPR036779 LysM domain superfamily PACID_01310 a5342d18d8a3098d84faa1146308db72 943 SMART SM00257 172 219 2.8E-8 T 14-10-2018 IPR018392 LysM domain PACID_01310 a5342d18d8a3098d84faa1146308db72 943 SMART SM00257 250 299 0.063 T 14-10-2018 IPR018392 LysM domain PACID_01310 a5342d18d8a3098d84faa1146308db72 943 Gene3D G3DSA:1.25.40.10 798 943 2.1E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_01310 a5342d18d8a3098d84faa1146308db72 943 Pfam PF01476 LysM domain 252 299 1.2E-4 T 14-10-2018 IPR018392 LysM domain PACID_01310 a5342d18d8a3098d84faa1146308db72 943 Pfam PF01476 LysM domain 173 219 6.9E-8 T 14-10-2018 IPR018392 LysM domain PACID_01310 a5342d18d8a3098d84faa1146308db72 943 SMART SM01043 795 934 8.1E-6 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain PACID_01310 a5342d18d8a3098d84faa1146308db72 943 SUPERFAMILY SSF48452 815 940 5.69E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_14080 c0f8aa060df4a44705f7caf1991a7f35 265 Pfam PF00753 Metallo-beta-lactamase superfamily 23 182 5.3E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_14080 c0f8aa060df4a44705f7caf1991a7f35 265 SUPERFAMILY SSF56281 6 232 4.19E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_14080 c0f8aa060df4a44705f7caf1991a7f35 265 Gene3D G3DSA:3.60.15.10 2 205 2.4E-38 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like PACID_14080 c0f8aa060df4a44705f7caf1991a7f35 265 SMART SM00849 25 189 3.5E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 SMART SM00859 2 117 1.4E-36 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 Gene3D G3DSA:3.30.360.10 125 325 3.1E-125 T 14-10-2018 PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 2 338 8.5E-125 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 115 1.5E-30 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 SUPERFAMILY SSF55347 126 325 3.42E-54 T 14-10-2018 PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 PIRSF PIRSF000148 1 343 1.5E-106 T 14-10-2018 PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 Gene3D G3DSA:3.40.50.720 3 336 3.1E-125 T 14-10-2018 PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 338 32.924 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 SUPERFAMILY SSF51735 1 153 1.27E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_28040 1e33817f6399fd981a08186b8a2b738d 371 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 136 324 2.5E-44 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 PACID_29930 86394d7c594f181607485da80bb71ec3 454 Pfam PF00872 Transposase, Mutator family 44 415 1.4E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_15790 86394d7c594f181607485da80bb71ec3 454 Pfam PF00872 Transposase, Mutator family 44 415 1.4E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_16800 d3ef5f2b777f4c0f46f77422d64fdc5c 616 Pfam PF00535 Glycosyl transferase family 2 133 293 3.4E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PACID_16800 d3ef5f2b777f4c0f46f77422d64fdc5c 616 SUPERFAMILY SSF53448 130 424 2.97E-49 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_16800 d3ef5f2b777f4c0f46f77422d64fdc5c 616 Gene3D G3DSA:3.90.550.10 127 332 2.6E-65 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_26830 4bdae5c129026d5dab8b6f78f96d8d0f 284 SUPERFAMILY SSF53474 52 279 5.69E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_26830 4bdae5c129026d5dab8b6f78f96d8d0f 284 Gene3D G3DSA:3.40.50.1820 68 284 1.2E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_26830 4bdae5c129026d5dab8b6f78f96d8d0f 284 Pfam PF07859 alpha/beta hydrolase fold 107 280 2.4E-48 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PACID_07440 9924f9d62d901b9e8462605bd74e84e6 178 Gene3D G3DSA:2.60.40.790 2 135 8.9E-31 T 14-10-2018 IPR008978 HSP20-like chaperone PACID_07440 9924f9d62d901b9e8462605bd74e84e6 178 Pfam PF00011 Hsp20/alpha crystallin family 36 134 5.8E-21 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain PACID_07440 9924f9d62d901b9e8462605bd74e84e6 178 SUPERFAMILY SSF49764 11 134 2.86E-31 T 14-10-2018 IPR008978 HSP20-like chaperone PACID_32040 2d2f18a19567411e8458006aa48226e2 358 Gene3D G3DSA:3.40.50.720 140 327 8.6E-79 T 14-10-2018 PACID_32040 2d2f18a19567411e8458006aa48226e2 358 Gene3D G3DSA:3.40.50.720 66 350 8.6E-79 T 14-10-2018 PACID_32040 2d2f18a19567411e8458006aa48226e2 358 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 150 321 8.3E-47 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 PACID_32040 2d2f18a19567411e8458006aa48226e2 358 SUPERFAMILY SSF51735 142 321 3.36E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_29460 e698c48bfb5413e88b1aef450549bb9b 515 PIRSF PIRSF006603 46 496 1.5E-89 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PACID_29460 e698c48bfb5413e88b1aef450549bb9b 515 Pfam PF01554 MatE 297 448 1.6E-29 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PACID_29460 e698c48bfb5413e88b1aef450549bb9b 515 Pfam PF01554 MatE 66 225 3.9E-30 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PACID_29460 e698c48bfb5413e88b1aef450549bb9b 515 TIGRFAM TIGR00797 matE: MATE efflux family protein 66 460 9.2E-75 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 SUPERFAMILY SSF48557 18 470 9.11E-128 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 Gene3D G3DSA:1.10.275.10 37 242 6.3E-163 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 TIGRFAM TIGR00838 argH: argininosuccinate lyase 15 468 2.1E-172 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 Gene3D G3DSA:1.10.40.30 373 445 6.3E-163 T 14-10-2018 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 Pfam PF14698 Argininosuccinate lyase C-terminal 376 443 4.8E-23 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00145 Argininosuccinate lyase family signature 323 342 5.0E-48 T 14-10-2018 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00145 Argininosuccinate lyase family signature 244 268 5.0E-48 T 14-10-2018 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00145 Argininosuccinate lyase family signature 206 222 5.0E-48 T 14-10-2018 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00145 Argininosuccinate lyase family signature 288 304 5.0E-48 T 14-10-2018 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00145 Argininosuccinate lyase family signature 155 175 5.0E-48 T 14-10-2018 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00145 Argininosuccinate lyase family signature 114 136 5.0E-48 T 14-10-2018 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 Gene3D G3DSA:1.20.200.10 132 461 6.3E-163 T 14-10-2018 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 ProSitePatterns PS00163 Fumarate lyases signature. 288 297 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 Pfam PF00206 Lyase 18 313 3.7E-60 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00149 Fumarate lyase superfamily signature 160 178 4.2E-24 T 14-10-2018 IPR000362 Fumarate lyase family PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00149 Fumarate lyase superfamily signature 115 133 4.2E-24 T 14-10-2018 IPR000362 Fumarate lyase family PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00149 Fumarate lyase superfamily signature 288 304 4.2E-24 T 14-10-2018 IPR000362 Fumarate lyase family PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 PRINTS PR00149 Fumarate lyase superfamily signature 244 271 4.2E-24 T 14-10-2018 IPR000362 Fumarate lyase family PACID_20300 eb833a621c8d47dc82bfcdab37d99f28 476 Hamap MF_00006 Argininosuccinate lyase [argH]. 14 466 38.932 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 PACID_31010 7b5b488c33592b2de69d94f038e0ae4a 468 Gene3D G3DSA:3.30.428.10 177 293 7.4E-19 T 14-10-2018 IPR036265 HIT-like superfamily PACID_31010 7b5b488c33592b2de69d94f038e0ae4a 468 Pfam PF16268 Domain of unknown function (DUF4921) 29 464 3.8E-199 T 14-10-2018 IPR032576 Domain of unknown function DUF4921 PACID_31010 7b5b488c33592b2de69d94f038e0ae4a 468 Gene3D G3DSA:3.30.428.10 294 435 7.4E-19 T 14-10-2018 IPR036265 HIT-like superfamily PACID_31010 7b5b488c33592b2de69d94f038e0ae4a 468 SUPERFAMILY SSF54197 36 292 5.59E-19 T 14-10-2018 IPR036265 HIT-like superfamily PACID_06110 f6062468d266d13a43fe4030992c4818 889 Pfam PF02687 FtsX-like permease family 289 382 3.7E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_05010 3fb227e3352170e688ce0a453526bbf3 218 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 18 212 2.0E-57 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PACID_05010 3fb227e3352170e688ce0a453526bbf3 218 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 17 215 5.7E-48 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PACID_05010 3fb227e3352170e688ce0a453526bbf3 218 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 13 215 27.468 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PACID_05010 3fb227e3352170e688ce0a453526bbf3 218 SUPERFAMILY SSF50486 18 217 4.32E-50 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 PACID_05010 3fb227e3352170e688ce0a453526bbf3 218 Gene3D G3DSA:3.10.300.10 16 218 2.7E-57 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 PACID_29790 5adddb6fb23c38e347d6de7f59a0e6f1 445 Gene3D G3DSA:1.20.1250.20 16 204 1.5E-7 T 14-10-2018 PACID_29790 5adddb6fb23c38e347d6de7f59a0e6f1 445 Gene3D G3DSA:1.20.1250.20 244 432 5.1E-22 T 14-10-2018 PACID_29790 5adddb6fb23c38e347d6de7f59a0e6f1 445 SUPERFAMILY SSF103473 12 430 2.09E-39 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_29790 5adddb6fb23c38e347d6de7f59a0e6f1 445 Pfam PF07690 Major Facilitator Superfamily 41 392 9.1E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_01260 152e133d2ffc1f33f398e6dc466bc88a 305 Pfam PF00482 Type II secretion system (T2SS), protein F 116 243 1.9E-6 T 14-10-2018 IPR018076 Type II secretion system F domain PACID_19470 1c7e4ebff41381b4178ff6e6643510de 327 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 12 312 51.476 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 PACID_19470 1c7e4ebff41381b4178ff6e6643510de 327 Pfam PF02540 NAD synthase 163 304 3.5E-30 T 14-10-2018 IPR022310 NAD/GMP synthase PACID_19470 1c7e4ebff41381b4178ff6e6643510de 327 Pfam PF02540 NAD synthase 18 103 1.5E-17 T 14-10-2018 IPR022310 NAD/GMP synthase PACID_19470 1c7e4ebff41381b4178ff6e6643510de 327 SUPERFAMILY SSF52402 7 318 1.08E-54 T 14-10-2018 PACID_19470 1c7e4ebff41381b4178ff6e6643510de 327 TIGRFAM TIGR00552 nadE: NAD+ synthetase 133 317 6.5E-32 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 PACID_29390 53ca965b9d195b5add9f71eaddd10c7b 319 SUPERFAMILY SSF53474 31 318 2.26E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_29390 53ca965b9d195b5add9f71eaddd10c7b 319 Gene3D G3DSA:3.40.50.1820 6 316 2.4E-68 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_29390 53ca965b9d195b5add9f71eaddd10c7b 319 Pfam PF07859 alpha/beta hydrolase fold 86 296 2.1E-55 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PACID_24260 47e4a51bb91a45280ed1caeb752a351c 159 ProSitePatterns PS00893 Nudix box signature. 49 70 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PACID_24260 47e4a51bb91a45280ed1caeb752a351c 159 SUPERFAMILY SSF55811 8 145 2.71E-24 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_24260 47e4a51bb91a45280ed1caeb752a351c 159 Pfam PF00293 NUDIX domain 31 135 6.8E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_24260 47e4a51bb91a45280ed1caeb752a351c 159 Gene3D G3DSA:3.90.79.10 1 145 3.6E-29 T 14-10-2018 PACID_14470 9ddf51ff0dd02e8387c03537600e7863 291 Pfam PF13602 Zinc-binding dehydrogenase 189 290 1.4E-8 T 14-10-2018 PACID_14470 9ddf51ff0dd02e8387c03537600e7863 291 SMART SM00829 13 291 1.8E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_14470 9ddf51ff0dd02e8387c03537600e7863 291 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 99 7.4E-8 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_14470 9ddf51ff0dd02e8387c03537600e7863 291 SUPERFAMILY SSF50129 4 157 3.35E-29 T 14-10-2018 IPR011032 GroES-like superfamily PACID_14470 9ddf51ff0dd02e8387c03537600e7863 291 Gene3D G3DSA:3.90.180.10 12 290 6.7E-63 T 14-10-2018 PACID_14470 9ddf51ff0dd02e8387c03537600e7863 291 SUPERFAMILY SSF51735 120 289 3.7E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_14470 9ddf51ff0dd02e8387c03537600e7863 291 Gene3D G3DSA:3.40.50.720 131 266 6.7E-63 T 14-10-2018 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 SUPERFAMILY SSF51055 1139 1183 5.1E-10 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 SUPERFAMILY SSF51055 1189 1232 4.05E-11 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 Gene3D G3DSA:2.10.10.20 1191 1234 3.6E-13 T 14-10-2018 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 Pfam PF02839 Carbohydrate binding domain 1207 1230 9.8E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 Gene3D G3DSA:1.50.10.10 718 885 5.2E-7 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 Gene3D G3DSA:2.10.10.20 1139 1185 7.7E-12 T 14-10-2018 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 SUPERFAMILY SSF48208 642 1014 1.87E-14 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 SMART SM00495 1139 1183 9.5E-9 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PACID_31780 1c4da1be89bf023d70ff09fdfba06216 1234 SMART SM00495 1190 1233 8.4E-12 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 PACID_22240 bde60b03fc3505f37c4275a9aa7321aa 164 Pfam PF01957 NfeD-like C-terminal, partner-binding 15 151 2.7E-21 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain PACID_22240 bde60b03fc3505f37c4275a9aa7321aa 164 Gene3D G3DSA:2.40.50.140 92 151 7.5E-17 T 14-10-2018 PACID_22240 bde60b03fc3505f37c4275a9aa7321aa 164 SUPERFAMILY SSF141322 89 150 2.62E-8 T 14-10-2018 PACID_33010 6d4bdda2572ca0e654399c18cf384a9b 515 SUPERFAMILY SSF49899 351 500 2.06E-11 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PACID_33010 6d4bdda2572ca0e654399c18cf384a9b 515 Gene3D G3DSA:2.60.120.560 361 495 4.1E-124 T 14-10-2018 PACID_33010 6d4bdda2572ca0e654399c18cf384a9b 515 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 27 348 5.7E-77 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal PACID_33010 6d4bdda2572ca0e654399c18cf384a9b 515 SMART SM00640 27 474 7.3E-93 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 PACID_33010 6d4bdda2572ca0e654399c18cf384a9b 515 Gene3D G3DSA:2.115.10.20 22 360 4.1E-124 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PACID_33010 6d4bdda2572ca0e654399c18cf384a9b 515 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 410 494 1.7E-6 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal PACID_33010 6d4bdda2572ca0e654399c18cf384a9b 515 SUPERFAMILY SSF75005 19 345 1.88E-84 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PACID_11700 d42bca59282d1155169075a4b91d96d3 408 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 8 379 3.2E-139 T 14-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 PACID_11700 d42bca59282d1155169075a4b91d96d3 408 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 99 107 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 PACID_11700 d42bca59282d1155169075a4b91d96d3 408 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 197 207 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 PACID_11700 d42bca59282d1155169075a4b91d96d3 408 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 14 33 - T 14-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 PACID_11700 d42bca59282d1155169075a4b91d96d3 408 SUPERFAMILY SSF51161 300 407 6.52E-19 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily PACID_11700 d42bca59282d1155169075a4b91d96d3 408 SUPERFAMILY SSF53448 3 359 6.68E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_11700 d42bca59282d1155169075a4b91d96d3 408 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 5 406 46.59 T 14-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 PACID_11700 d42bca59282d1155169075a4b91d96d3 408 Gene3D G3DSA:2.160.10.10 288 405 4.5E-35 T 14-10-2018 PACID_11700 d42bca59282d1155169075a4b91d96d3 408 Pfam PF00483 Nucleotidyl transferase 10 277 6.5E-65 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PACID_11700 d42bca59282d1155169075a4b91d96d3 408 Gene3D G3DSA:3.90.550.10 2 287 5.3E-76 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_21800 3f618b1589bce902d27033d9ed8b7c51 463 Pfam PF13685 Iron-containing alcohol dehydrogenase 44 300 3.3E-52 T 14-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 PACID_21800 3f618b1589bce902d27033d9ed8b7c51 463 SUPERFAMILY SSF56796 19 337 1.57E-42 T 14-10-2018 PACID_21800 3f618b1589bce902d27033d9ed8b7c51 463 Gene3D G3DSA:3.40.50.1970 16 180 1.2E-24 T 14-10-2018 PACID_30080 b03f02f9ac3e63c1569b97dfac5fdff9 273 SUPERFAMILY SSF48317 58 246 1.57E-33 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily PACID_30080 b03f02f9ac3e63c1569b97dfac5fdff9 273 SMART SM00014 130 243 1.9E-17 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PACID_30080 b03f02f9ac3e63c1569b97dfac5fdff9 273 Pfam PF01569 PAP2 superfamily 133 245 3.9E-22 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase PACID_30080 b03f02f9ac3e63c1569b97dfac5fdff9 273 Gene3D G3DSA:1.20.144.10 161 268 1.0E-23 T 14-10-2018 PACID_29910 633f27e2ea60e20fb31c3822bc8db358 331 Gene3D G3DSA:1.20.120.920 95 288 2.8E-69 T 14-10-2018 PACID_29910 633f27e2ea60e20fb31c3822bc8db358 331 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 133 249 4.4E-26 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 PACID_29910 633f27e2ea60e20fb31c3822bc8db358 331 Pfam PF01867 CRISPR associated protein Cas1 133 248 1.9E-10 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 PACID_29910 633f27e2ea60e20fb31c3822bc8db358 331 Gene3D G3DSA:3.100.10.20 5 94 2.6E-29 T 14-10-2018 PACID_29910 633f27e2ea60e20fb31c3822bc8db358 331 TIGRFAM TIGR03638 cas1_ECOLI: CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI 8 273 2.0E-104 T 14-10-2018 IPR019851 CRISPR-associated protein Cas1, ECOLI subtype GO:0004520|GO:0043571|GO:0046872 PACID_29910 633f27e2ea60e20fb31c3822bc8db358 331 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 8 290 18.489 T 14-10-2018 IPR002729 CRISPR-associated protein Cas1 GO:0003676|GO:0004519|GO:0043571|GO:0046872|GO:0051607 PACID_31940 8b75dfeb1607b0080d26d1d410c338ac 328 SUPERFAMILY SSF63825 71 245 3.4E-8 T 14-10-2018 PACID_32150 39c5593973cebb9d6cdd9f32c0445811 455 Gene3D G3DSA:3.40.190.10 39 442 4.7E-49 T 14-10-2018 PACID_32150 39c5593973cebb9d6cdd9f32c0445811 455 SUPERFAMILY SSF53850 42 439 6.72E-32 T 14-10-2018 PACID_32150 39c5593973cebb9d6cdd9f32c0445811 455 Pfam PF01547 Bacterial extracellular solute-binding protein 145 326 5.0E-15 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_03690 0438895b663dcefbdbcac33bade66b49 97 SUPERFAMILY SSF51569 3 88 1.08E-25 T 14-10-2018 PACID_03690 0438895b663dcefbdbcac33bade66b49 97 Pfam PF01081 KDPG and KHG aldolase 2 80 8.1E-29 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PACID_03690 0438895b663dcefbdbcac33bade66b49 97 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 7 20 - T 14-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 PACID_03690 0438895b663dcefbdbcac33bade66b49 97 Gene3D G3DSA:3.20.20.70 1 92 5.0E-31 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_27380 03aa086457b6d5c30a37396d01ad5a7d 288 Pfam PF00583 Acetyltransferase (GNAT) family 33 88 3.3E-5 T 14-10-2018 IPR000182 GNAT domain PACID_27380 03aa086457b6d5c30a37396d01ad5a7d 288 Gene3D G3DSA:3.40.630.30 2 254 1.3E-8 T 14-10-2018 PACID_27380 03aa086457b6d5c30a37396d01ad5a7d 288 SUPERFAMILY SSF55729 1 90 1.85E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 Gene3D G3DSA:1.10.560.10 8 520 1.1E-220 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 SUPERFAMILY SSF54849 138 203 1.28E-23 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 SUPERFAMILY SSF52029 184 375 1.94E-77 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 524 8.5E-96 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 PRINTS PR00298 60kDa chaperonin signature 397 418 6.8E-69 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 PRINTS PR00298 60kDa chaperonin signature 27 53 6.8E-69 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 PRINTS PR00298 60kDa chaperonin signature 83 110 6.8E-69 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 PRINTS PR00298 60kDa chaperonin signature 267 290 6.8E-69 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 PRINTS PR00298 60kDa chaperonin signature 349 374 6.8E-69 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 1.0E-240 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 Gene3D G3DSA:3.50.7.10 191 371 1.1E-220 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 Gene3D G3DSA:3.30.260.10 136 409 1.1E-220 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 SUPERFAMILY SSF48592 7 520 1.68E-72 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 Hamap MF_00600 60 kDa chaperonin [groL]. 2 530 39.446 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_24930 753c88e2f8c1662011566ddfb275cc97 530 ProSitePatterns PS00296 Chaperonins cpn60 signature. 404 415 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 PACID_11330 22122278462779e38f528543a6840022 284 SUPERFAMILY SSF81345 2 269 1.57E-32 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_11330 22122278462779e38f528543a6840022 284 Gene3D G3DSA:1.10.3470.10 13 278 2.8E-5 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_11330 22122278462779e38f528543a6840022 284 Pfam PF00950 ABC 3 transport family 20 269 1.6E-41 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 PACID_03940 b7c29c3eac2dfb8fca45ea8f9a3ecd9f 569 SUPERFAMILY SSF50621 368 492 8.63E-7 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PACID_03940 b7c29c3eac2dfb8fca45ea8f9a3ecd9f 569 SUPERFAMILY SSF51419 50 286 9.81E-29 T 14-10-2018 IPR029066 PLP-binding barrel PACID_03940 b7c29c3eac2dfb8fca45ea8f9a3ecd9f 569 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 73 280 2.7E-17 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 PACID_03940 b7c29c3eac2dfb8fca45ea8f9a3ecd9f 569 Gene3D G3DSA:3.20.20.10 63 295 4.9E-38 T 14-10-2018 IPR029066 PLP-binding barrel PACID_03940 b7c29c3eac2dfb8fca45ea8f9a3ecd9f 569 Gene3D G3DSA:2.40.37.10 356 514 2.2E-13 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 PACID_06720 8fc02d9541529714224fba97e4661be6 335 SUPERFAMILY SSF161098 98 292 1.31E-19 T 14-10-2018 IPR035906 MetI-like superfamily PACID_06720 8fc02d9541529714224fba97e4661be6 335 Gene3D G3DSA:1.10.3720.10 92 313 9.1E-18 T 14-10-2018 IPR035906 MetI-like superfamily PACID_06720 8fc02d9541529714224fba97e4661be6 335 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 40 68 4.8E-5 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PACID_06720 8fc02d9541529714224fba97e4661be6 335 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 313 7.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 Gene3D G3DSA:2.40.50.100 21 89 3.4E-28 T 14-10-2018 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 Pfam PF01016 Ribosomal L27 protein 2 80 4.8E-36 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 83 27.182 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.6E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.6E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.6E-35 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 SUPERFAMILY SSF110324 2 81 2.41E-31 T 14-10-2018 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 80 1.1E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13320 5b9aeee0896b5a388743ded9b746a46a 89 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 72 2.0E-15 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_14620 90a43f02a6177ea481f5ab7e6a94f690 1746 Gene3D G3DSA:3.40.50.150 86 278 3.2E-19 T 14-10-2018 PACID_14620 90a43f02a6177ea481f5ab7e6a94f690 1746 SUPERFAMILY SSF52540 979 1384 5.04E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14620 90a43f02a6177ea481f5ab7e6a94f690 1746 Gene3D G3DSA:3.40.50.300 1254 1376 1.0E-17 T 14-10-2018 PACID_14620 90a43f02a6177ea481f5ab7e6a94f690 1746 SUPERFAMILY SSF53335 74 270 8.36E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_14620 90a43f02a6177ea481f5ab7e6a94f690 1746 SUPERFAMILY SSF52540 737 1067 2.17E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14620 90a43f02a6177ea481f5ab7e6a94f690 1746 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 166 178 4.2E-6 T 14-10-2018 PACID_14620 90a43f02a6177ea481f5ab7e6a94f690 1746 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 109 123 4.2E-6 T 14-10-2018 PACID_14620 90a43f02a6177ea481f5ab7e6a94f690 1746 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 192 216 4.2E-6 T 14-10-2018 PACID_25880 1ad8f04910544507b1d711fc12e1af3d 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 9.1E-15 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_25880 1ad8f04910544507b1d711fc12e1af3d 328 Gene3D G3DSA:3.30.360.10 139 327 8.5E-40 T 14-10-2018 PACID_25880 1ad8f04910544507b1d711fc12e1af3d 328 Gene3D G3DSA:3.40.50.720 1 138 1.4E-28 T 14-10-2018 PACID_25880 1ad8f04910544507b1d711fc12e1af3d 328 SUPERFAMILY SSF51735 2 155 1.55E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_25880 1ad8f04910544507b1d711fc12e1af3d 328 SUPERFAMILY SSF55347 130 293 3.11E-19 T 14-10-2018 PACID_22640 21f17bd85593accb23a0d6de8c980284 254 PIRSF PIRSF006648 25 251 2.5E-24 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_22640 21f17bd85593accb23a0d6de8c980284 254 Pfam PF01061 ABC-2 type transporter 28 221 6.0E-13 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PACID_04720 b7c276043550d84161c5cb8622e0f544 370 PIRSF PIRSF000390 1 370 5.7E-111 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PACID_04720 b7c276043550d84161c5cb8622e0f544 370 SUPERFAMILY SSF53383 5 366 6.39E-110 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_04720 b7c276043550d84161c5cb8622e0f544 370 Gene3D G3DSA:3.90.1150.10 244 368 5.5E-28 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_04720 b7c276043550d84161c5cb8622e0f544 370 Gene3D G3DSA:3.40.640.10 2 243 4.6E-93 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_04720 b7c276043550d84161c5cb8622e0f544 370 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 362 4.6E-125 T 14-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 Gene3D G3DSA:1.20.58.100 511 628 4.0E-22 T 14-10-2018 PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 SUPERFAMILY SSF56425 283 439 1.92E-31 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 58 673 5.9E-289 T 14-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 Pfam PF02910 Fumarate reductase flavoprotein C-term 539 673 3.4E-34 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 Gene3D G3DSA:3.50.50.60 58 486 2.6E-96 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 Gene3D G3DSA:3.90.700.10 314 452 2.6E-96 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 SUPERFAMILY SSF51905 56 486 7.78E-47 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 Pfam PF00890 FAD binding domain 58 477 2.5E-53 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_21320 1efe3effdec9851bec73f14c693e14bb 674 SUPERFAMILY SSF46977 530 673 2.49E-38 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_07930 9c43644be2db86cdb73f1e819f2c8d2d 254 Pfam PF09335 SNARE associated Golgi protein 73 190 9.0E-22 T 14-10-2018 IPR032816 SNARE associated Golgi protein PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 Gene3D G3DSA:3.40.50.1370 8 305 4.1E-104 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 SUPERFAMILY SSF53671 1 309 2.36E-89 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 154 307 5.5E-49 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 Gene3D G3DSA:3.40.50.1370 130 296 4.1E-104 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 1 310 72.905 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 140 1.3E-42 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 2 309 3.0E-102 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 45 52 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 262 271 4.9E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 274 297 4.9E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 4.9E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 45 64 4.9E-25 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 2.7E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 288 299 2.7E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 43 57 2.7E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 76 89 2.7E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PACID_20310 c7c353489e1e5e61fec7a63926036d52 310 PRINTS PR00102 Ornithine carbamoyltransferase signature 116 130 2.7E-26 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 PACID_34230 5c8abbc24d1528a6ae7d631df043d61b 189 Pfam PF12823 Domain of unknown function (DUF3817) 85 171 5.0E-24 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane PACID_34230 5c8abbc24d1528a6ae7d631df043d61b 189 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 87 170 5.4E-28 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane PACID_10560 361acf155663be4994ebc430c8319e1f 258 SUPERFAMILY SSF116734 45 244 2.29E-17 T 14-10-2018 PACID_10560 361acf155663be4994ebc430c8319e1f 258 Gene3D G3DSA:3.90.220.20 51 197 1.0E-16 T 14-10-2018 PACID_20050 611f8d46be9733e4d010742005f722f0 1081 SUPERFAMILY SSF52540 323 727 9.43E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20050 611f8d46be9733e4d010742005f722f0 1081 SUPERFAMILY SSF52980 764 1049 1.98E-32 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_20050 611f8d46be9733e4d010742005f722f0 1081 Gene3D G3DSA:1.10.486.10 417 620 3.1E-60 T 14-10-2018 PACID_20050 611f8d46be9733e4d010742005f722f0 1081 SUPERFAMILY SSF52540 15 202 1.96E-15 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20050 611f8d46be9733e4d010742005f722f0 1081 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 16 203 1.2E-12 T 14-10-2018 PACID_20050 611f8d46be9733e4d010742005f722f0 1081 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 297 730 2.6E-62 T 14-10-2018 PACID_20050 611f8d46be9733e4d010742005f722f0 1081 Gene3D G3DSA:3.40.50.300 322 729 3.1E-60 T 14-10-2018 PACID_02820 0013c9d3da8716f6bbafbc0aa69c6023 308 Gene3D G3DSA:3.40.1190.20 3 289 1.3E-90 T 14-10-2018 IPR029056 Ribokinase-like PACID_02820 0013c9d3da8716f6bbafbc0aa69c6023 308 SUPERFAMILY SSF53613 14 275 1.87E-67 T 14-10-2018 IPR029056 Ribokinase-like PACID_02820 0013c9d3da8716f6bbafbc0aa69c6023 308 Pfam PF08543 Phosphomethylpyrimidine kinase 25 272 1.3E-77 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 PACID_02820 0013c9d3da8716f6bbafbc0aa69c6023 308 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 18 273 1.2E-71 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PACID_27920 36d4160d46ffa693c127a122c9b9e5cf 335 Pfam PF10646 Sporulation and spore germination 131 221 7.1E-8 T 14-10-2018 IPR019606 GerMN domain PACID_27920 36d4160d46ffa693c127a122c9b9e5cf 335 SMART SM00909 136 226 1.0E-5 T 14-10-2018 IPR019606 GerMN domain PACID_30210 29f11c329d78d1af48b2322e32d1e27a 320 SUPERFAMILY SSF160964 38 79 7.45E-6 T 14-10-2018 PACID_30210 29f11c329d78d1af48b2322e32d1e27a 320 SUPERFAMILY SSF161098 80 305 5.1E-49 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30210 29f11c329d78d1af48b2322e32d1e27a 320 Gene3D G3DSA:1.10.3720.10 76 318 3.9E-56 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30210 29f11c329d78d1af48b2322e32d1e27a 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 310 1.6E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_01100 5957e44f7204d4637dbc44e56d37018e 293 Pfam PF01734 Patatin-like phospholipase 11 178 1.4E-15 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 PACID_01100 5957e44f7204d4637dbc44e56d37018e 293 SUPERFAMILY SSF52151 9 260 1.36E-28 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase PACID_01100 5957e44f7204d4637dbc44e56d37018e 293 Gene3D G3DSA:3.40.1090.10 85 208 3.7E-6 T 14-10-2018 PACID_20630 b91f118d48acf5edfa69dbe21265b222 188 Gene3D G3DSA:3.40.50.150 3 172 3.3E-10 T 14-10-2018 PACID_20630 b91f118d48acf5edfa69dbe21265b222 188 SUPERFAMILY SSF53335 23 143 8.8E-9 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_31790 16850a1d088951e28a7279c2b9fa214a 344 SMART SM00354 1 69 9.8E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_31790 16850a1d088951e28a7279c2b9fa214a 344 Gene3D G3DSA:1.10.260.40 1 57 1.9E-17 T 14-10-2018 PACID_31790 16850a1d088951e28a7279c2b9fa214a 344 Gene3D G3DSA:3.40.50.2300 59 182 2.1E-15 T 14-10-2018 PACID_31790 16850a1d088951e28a7279c2b9fa214a 344 SUPERFAMILY SSF53822 56 340 8.78E-24 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_31790 16850a1d088951e28a7279c2b9fa214a 344 Gene3D G3DSA:3.40.50.2300 189 317 2.5E-20 T 14-10-2018 PACID_31790 16850a1d088951e28a7279c2b9fa214a 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 1 43 4.5E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_31790 16850a1d088951e28a7279c2b9fa214a 344 SUPERFAMILY SSF47413 1 57 3.66E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_31790 16850a1d088951e28a7279c2b9fa214a 344 Pfam PF13377 Periplasmic binding protein-like domain 207 326 2.7E-18 T 14-10-2018 PACID_20690 19210afeccd1596889f070b92657e500 253 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 3 253 5.8E-102 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 PACID_20690 19210afeccd1596889f070b92657e500 253 Pfam PF00977 Histidine biosynthesis protein 6 236 1.4E-79 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 PACID_20690 19210afeccd1596889f070b92657e500 253 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 2 253 44.977 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 PACID_20690 19210afeccd1596889f070b92657e500 253 SUPERFAMILY SSF51366 4 253 2.9E-75 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PACID_20690 19210afeccd1596889f070b92657e500 253 Gene3D G3DSA:3.20.20.70 1 253 1.2E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_29010 bb47b97b76acacecab0678b328aa957b 134 TIGRFAM TIGR03816 tadE_like_DECH: helicase/secretion neighborhood TadE-like protein 18 132 8.5E-19 T 14-10-2018 IPR021202 Apoptosis inhibitor Rv3654c-like PACID_14040 0a4a50f8291dde5d2e03da12a46a1ecb 377 SUPERFAMILY SSF102114 1 376 4.32E-107 T 14-10-2018 PACID_14040 0a4a50f8291dde5d2e03da12a46a1ecb 377 SMART SM00729 1 222 1.6E-52 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 PACID_14040 0a4a50f8291dde5d2e03da12a46a1ecb 377 Pfam PF04055 Radical SAM superfamily 3 176 1.3E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_14040 0a4a50f8291dde5d2e03da12a46a1ecb 377 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 1 335 2.2E-78 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 PACID_14040 0a4a50f8291dde5d2e03da12a46a1ecb 377 Gene3D G3DSA:3.80.30.20 1 309 1.7E-96 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe PACID_26580 af8a02b756efb5733dfa93ff7724c1be 152 Gene3D G3DSA:3.40.140.10 9 150 2.0E-32 T 14-10-2018 PACID_26580 af8a02b756efb5733dfa93ff7724c1be 152 PIRSF PIRSF006019 6 152 1.5E-38 T 14-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 PACID_26580 af8a02b756efb5733dfa93ff7724c1be 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 95 127 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 PACID_26580 af8a02b756efb5733dfa93ff7724c1be 152 SUPERFAMILY SSF53927 15 139 3.61E-25 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PACID_26580 af8a02b756efb5733dfa93ff7724c1be 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 14 136 1.2E-21 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain PACID_25530 cb12046be1408bd0e7c6a319fa803011 127 SUPERFAMILY SSF53137 14 125 4.8E-45 T 14-10-2018 PACID_25530 cb12046be1408bd0e7c6a319fa803011 127 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 13 127 26.496 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25530 cb12046be1408bd0e7c6a319fa803011 127 Gene3D G3DSA:3.30.420.100 12 127 8.5E-40 T 14-10-2018 PACID_25530 cb12046be1408bd0e7c6a319fa803011 127 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 13 127 9.4E-46 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25530 cb12046be1408bd0e7c6a319fa803011 127 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 14 127 1.3E-36 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_08900 2e5519dced0efe960a681696594d87d9 282 Gene3D G3DSA:3.40.50.300 11 256 3.2E-63 T 14-10-2018 PACID_08900 2e5519dced0efe960a681696594d87d9 282 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_08900 2e5519dced0efe960a681696594d87d9 282 SUPERFAMILY SSF52540 11 238 8.65E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_08900 2e5519dced0efe960a681696594d87d9 282 SMART SM00382 37 231 8.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_08900 2e5519dced0efe960a681696594d87d9 282 Pfam PF00005 ABC transporter 28 176 7.6E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_08900 2e5519dced0efe960a681696594d87d9 282 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 22 209 4.5E-84 T 14-10-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 PACID_24540 f7e82373d477c44de9c4015775a473ce 750 SUPERFAMILY SSF53659 2 738 0.0 T 14-10-2018 PACID_24540 f7e82373d477c44de9c4015775a473ce 750 Pfam PF03971 Monomeric isocitrate dehydrogenase 3 736 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PACID_24540 f7e82373d477c44de9c4015775a473ce 750 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 2 738 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PACID_24540 f7e82373d477c44de9c4015775a473ce 750 PIRSF PIRSF009407 1 739 0.0 T 14-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 PACID_25480 d1c42d1121196eeead6b636b8b0d017a 330 SUPERFAMILY SSF161098 118 306 3.11E-16 T 14-10-2018 IPR035906 MetI-like superfamily PACID_25480 d1c42d1121196eeead6b636b8b0d017a 330 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 46 98 3.5E-12 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PACID_25480 d1c42d1121196eeead6b636b8b0d017a 330 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 141 323 1.5E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_25480 d1c42d1121196eeead6b636b8b0d017a 330 Gene3D G3DSA:1.10.3720.10 111 321 1.8E-15 T 14-10-2018 IPR035906 MetI-like superfamily PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 Gene3D G3DSA:2.40.440.10 227 346 5.9E-23 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 Pfam PF08239 Bacterial SH3 domain 87 138 6.1E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 Pfam PF08239 Bacterial SH3 domain 156 207 5.8E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 Gene3D G3DSA:2.30.30.40 147 207 4.9E-14 T 14-10-2018 PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 Gene3D G3DSA:2.30.30.40 78 146 2.8E-9 T 14-10-2018 PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 SMART SM00287 78 141 3.0E-4 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 SMART SM00287 147 210 2.6E-5 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 Pfam PF03734 L,D-transpeptidase catalytic domain 235 345 1.9E-12 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PACID_27460 205a9753d0adb15039d7c7854882c5bd 347 SUPERFAMILY SSF141523 233 346 2.22E-21 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PACID_20100 c5040b5bcd8f96c6746cfb0d36e311c2 68 PRINTS PR00050 Cold shock protein signature 41 59 4.9E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PACID_20100 c5040b5bcd8f96c6746cfb0d36e311c2 68 PRINTS PR00050 Cold shock protein signature 4 19 4.9E-14 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PACID_20100 c5040b5bcd8f96c6746cfb0d36e311c2 68 SMART SM00357 3 68 7.2E-26 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 PACID_20100 c5040b5bcd8f96c6746cfb0d36e311c2 68 SUPERFAMILY SSF50249 1 67 6.21E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_20100 c5040b5bcd8f96c6746cfb0d36e311c2 68 Gene3D G3DSA:2.40.50.140 1 66 4.1E-27 T 14-10-2018 PACID_20100 c5040b5bcd8f96c6746cfb0d36e311c2 68 PIRSF PIRSF002599 1 68 1.9E-23 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 PACID_20100 c5040b5bcd8f96c6746cfb0d36e311c2 68 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.4E-26 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 155 5.8E-52 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 Gene3D G3DSA:3.40.50.620 1 157 2.5E-52 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 SUPERFAMILY SSF52374 2 153 5.09E-42 T 14-10-2018 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 84 100 6.6E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 19 40 6.6E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 110 132 6.6E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 48 72 6.6E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 1 19 6.6E-39 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 1 156 32.122 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 Pfam PF01467 Cytidylyltransferase-like 5 131 7.3E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PACID_21570 31613348ab6db80a85aeb6864bf932b3 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 59 2.0E-16 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 ProSitePatterns PS00221 MIP family signature. 72 80 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 Pfam PF00230 Major intrinsic protein 15 246 4.1E-38 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 Gene3D G3DSA:1.20.1080.10 8 250 2.7E-65 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.0E-30 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 PRINTS PR00783 Major intrinsic protein family signature 98 117 1.0E-30 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 PRINTS PR00783 Major intrinsic protein family signature 229 249 1.0E-30 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 PRINTS PR00783 Major intrinsic protein family signature 182 204 1.0E-30 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.0E-30 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 PACID_33730 80a731bb93ee68828aad17e01abd7c08 250 SUPERFAMILY SSF81338 13 249 6.67E-58 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 PACID_20360 b0c8fcdc9af98e790b8edafc42cfe699 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 1.7E-52 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 PACID_20360 b0c8fcdc9af98e790b8edafc42cfe699 160 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site PACID_20360 b0c8fcdc9af98e790b8edafc42cfe699 160 SUPERFAMILY SSF74982 4 134 4.58E-47 T 14-10-2018 IPR023620 Small protein B PACID_20360 b0c8fcdc9af98e790b8edafc42cfe699 160 Pfam PF01668 SmpB protein 10 151 6.2E-57 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 PACID_20360 b0c8fcdc9af98e790b8edafc42cfe699 160 Gene3D G3DSA:2.40.280.10 3 130 1.1E-45 T 14-10-2018 IPR023620 Small protein B PACID_20360 b0c8fcdc9af98e790b8edafc42cfe699 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 134 3.0E-60 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 PACID_20360 b0c8fcdc9af98e790b8edafc42cfe699 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 67.461 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 PACID_12300 ec8b8555b21bebfab2e2278c415f6016 138 Gene3D G3DSA:3.40.50.2300 10 138 3.4E-9 T 14-10-2018 PACID_12300 ec8b8555b21bebfab2e2278c415f6016 138 SUPERFAMILY SSF52172 9 134 3.13E-9 T 14-10-2018 IPR011006 CheY-like superfamily PACID_12300 ec8b8555b21bebfab2e2278c415f6016 138 SMART SM00448 12 128 0.0031 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_17730 d34e1eaf8e88e6c33f8f53faa4f21192 207 Pfam PF00805 Pentapeptide repeats (8 copies) 9 31 8.4E-4 T 14-10-2018 IPR001646 Pentapeptide repeat PACID_17730 d34e1eaf8e88e6c33f8f53faa4f21192 207 SUPERFAMILY SSF141571 12 150 2.75E-31 T 14-10-2018 PACID_17730 d34e1eaf8e88e6c33f8f53faa4f21192 207 Pfam PF13599 Pentapeptide repeats (9 copies) 86 150 5.2E-9 T 14-10-2018 IPR001646 Pentapeptide repeat PACID_17730 d34e1eaf8e88e6c33f8f53faa4f21192 207 Gene3D G3DSA:2.160.20.100 3 196 3.3E-36 T 14-10-2018 PACID_11730 800f91e44e758a684ed9d501b4968655 217 Pfam PF01596 O-methyltransferase 44 216 1.0E-19 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 PACID_11730 800f91e44e758a684ed9d501b4968655 217 SUPERFAMILY SSF53335 39 216 1.71E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_11730 800f91e44e758a684ed9d501b4968655 217 Gene3D G3DSA:3.40.50.150 14 217 4.6E-45 T 14-10-2018 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 20 509 31.579 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 Gene3D G3DSA:3.40.1390.10 21 118 2.1E-27 T 14-10-2018 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 40 505 2.0E-146 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 Pfam PF08245 Mur ligase middle domain 128 334 8.2E-49 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 SUPERFAMILY SSF53623 119 351 8.37E-69 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 Gene3D G3DSA:3.40.1190.10 119 355 1.1E-80 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 Pfam PF02875 Mur ligase family, glutamate ligase domain 354 438 3.5E-18 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 Gene3D G3DSA:3.90.190.20 356 513 4.7E-49 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 SUPERFAMILY SSF53244 354 505 3.82E-40 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 SUPERFAMILY SSF63418 23 118 1.7E-19 T 14-10-2018 IPR035911 MurE/MurF, N-terminal PACID_12800 b5e29f93ffab3da082ea8367f48fef8e 529 Pfam PF01225 Mur ligase family, catalytic domain 40 110 7.6E-11 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 PACID_27620 49bf67e212d98966b4a12c6d4c4504c9 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 304 1.3E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_27620 49bf67e212d98966b4a12c6d4c4504c9 305 SUPERFAMILY SSF161098 39 292 6.15E-41 T 14-10-2018 IPR035906 MetI-like superfamily PACID_27620 49bf67e212d98966b4a12c6d4c4504c9 305 Gene3D G3DSA:1.10.3720.10 76 302 5.8E-35 T 14-10-2018 IPR035906 MetI-like superfamily PACID_27620 49bf67e212d98966b4a12c6d4c4504c9 305 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 35 299 2.6E-81 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 PACID_10590 816cca2a1c2909e5be24c0c44090b423 518 Pfam PF07508 Recombinase 177 319 4.7E-10 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 PACID_10590 816cca2a1c2909e5be24c0c44090b423 518 Gene3D G3DSA:1.10.10.2600 164 343 6.0E-15 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily PACID_10590 816cca2a1c2909e5be24c0c44090b423 518 SUPERFAMILY SSF53041 10 159 6.93E-24 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 PACID_10590 816cca2a1c2909e5be24c0c44090b423 518 Gene3D G3DSA:3.40.50.1390 6 163 1.1E-34 T 14-10-2018 PACID_10590 816cca2a1c2909e5be24c0c44090b423 518 SMART SM00857 11 160 1.5E-32 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PACID_10590 816cca2a1c2909e5be24c0c44090b423 518 Pfam PF00239 Resolvase, N terminal domain 11 159 6.0E-26 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 PACID_31480 03a80dadfb5e035e1f777083e0f6f619 584 SMART SM00507 389 441 4.0E-9 T 14-10-2018 IPR003615 HNH nuclease PACID_31480 03a80dadfb5e035e1f777083e0f6f619 584 Pfam PF02720 Domain of unknown function (DUF222) 35 398 1.1E-24 T 14-10-2018 IPR003870 Domain of unknown function DUF222 PACID_18890 50bcfb6295b96c1f9fdf61ca33862f99 361 SUPERFAMILY SSF50610 231 296 4.58E-15 T 14-10-2018 IPR009004 Transposase, Mu, C-terminal PACID_18890 50bcfb6295b96c1f9fdf61ca33862f99 361 Pfam PF00665 Integrase core domain 39 165 7.9E-21 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_18890 50bcfb6295b96c1f9fdf61ca33862f99 361 Pfam PF09299 Mu transposase, C-terminal 235 294 1.4E-22 T 14-10-2018 IPR015378 Transposase-like, Mu, C-terminal PACID_18890 50bcfb6295b96c1f9fdf61ca33862f99 361 SUPERFAMILY SSF53098 37 219 3.79E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_18890 50bcfb6295b96c1f9fdf61ca33862f99 361 Gene3D G3DSA:2.30.30.130 222 296 8.5E-11 T 14-10-2018 IPR009004 Transposase, Mu, C-terminal PACID_18890 50bcfb6295b96c1f9fdf61ca33862f99 361 Gene3D G3DSA:3.30.420.10 32 221 1.4E-35 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_17550 ddeb103bc588be6efe3d91cea8e488d5 267 Pfam PF09754 PAC2 family 12 223 3.1E-41 T 14-10-2018 IPR019151 Proteasome assembly chaperone 2 PACID_17550 ddeb103bc588be6efe3d91cea8e488d5 267 Gene3D G3DSA:1.10.287.100 206 244 3.1E-72 T 14-10-2018 PACID_17550 ddeb103bc588be6efe3d91cea8e488d5 267 SUPERFAMILY SSF159659 2 246 1.31E-68 T 14-10-2018 PACID_17550 ddeb103bc588be6efe3d91cea8e488d5 267 Gene3D G3DSA:3.40.50.10900 4 205 3.1E-72 T 14-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily PACID_17550 ddeb103bc588be6efe3d91cea8e488d5 267 PIRSF PIRSF028754 1 267 1.4E-68 T 14-10-2018 IPR008492 Protein of unknown function DUF774 PACID_11410 447f56acb439e1dd2492caa04009caaa 167 Pfam PF00156 Phosphoribosyl transferase domain 15 159 5.5E-29 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PACID_11410 447f56acb439e1dd2492caa04009caaa 167 SUPERFAMILY SSF53271 7 160 1.44E-29 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_11410 447f56acb439e1dd2492caa04009caaa 167 Gene3D G3DSA:3.40.50.2020 11 166 4.5E-43 T 14-10-2018 PACID_26410 3de28f7bfa5fd4dcadb23945bca1dc0c 122 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 19 121 3.5E-33 T 14-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26410 3de28f7bfa5fd4dcadb23945bca1dc0c 122 Gene3D G3DSA:1.20.58.1610 1 122 8.0E-37 T 14-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_03800 c3b5ee68c756127b3fd10d6c791aae47 388 Gene3D G3DSA:3.20.20.140 4 270 1.9E-101 T 14-10-2018 PACID_03800 c3b5ee68c756127b3fd10d6c791aae47 388 Gene3D G3DSA:1.10.2020.10 44 140 1.9E-101 T 14-10-2018 PACID_03800 c3b5ee68c756127b3fd10d6c791aae47 388 SUPERFAMILY SSF51556 1 270 6.12E-95 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_03800 c3b5ee68c756127b3fd10d6c791aae47 388 Pfam PF02614 Glucuronate isomerase 2 269 5.7E-104 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 PACID_33910 443b340e96189ebaebd60f67374a4295 145 Pfam PF02566 OsmC-like protein 33 135 3.7E-13 T 14-10-2018 IPR003718 OsmC/Ohr family PACID_33910 443b340e96189ebaebd60f67374a4295 145 Gene3D G3DSA:3.30.300.20 4 140 9.2E-25 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta PACID_33910 443b340e96189ebaebd60f67374a4295 145 SUPERFAMILY SSF82784 7 137 1.18E-20 T 14-10-2018 IPR036102 OsmC/Ohr superfamily PACID_31510 7be41f33cc4eadb4af4acc3fcbb408d7 174 Pfam PF04205 FMN-binding domain 98 169 9.0E-11 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 PACID_31510 7be41f33cc4eadb4af4acc3fcbb408d7 174 Gene3D G3DSA:3.90.1010.20 82 174 6.1E-8 T 14-10-2018 PACID_31510 7be41f33cc4eadb4af4acc3fcbb408d7 174 SMART SM00900 87 172 1.5E-11 T 14-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 PACID_23860 1e18854471b774039cf843ef395fad0d 286 TIGRFAM TIGR00067 glut_race: glutamate racemase 13 254 6.8E-64 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23860 1e18854471b774039cf843ef395fad0d 286 Gene3D G3DSA:3.40.50.1860 102 213 7.5E-89 T 14-10-2018 PACID_23860 1e18854471b774039cf843ef395fad0d 286 Hamap MF_00258 Glutamate racemase [murI]. 11 262 35.18 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23860 1e18854471b774039cf843ef395fad0d 286 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 186 196 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23860 1e18854471b774039cf843ef395fad0d 286 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 77 85 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23860 1e18854471b774039cf843ef395fad0d 286 SUPERFAMILY SSF53681 116 266 3.71E-37 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23860 1e18854471b774039cf843ef395fad0d 286 Gene3D G3DSA:3.40.50.1860 12 259 7.5E-89 T 14-10-2018 PACID_23860 1e18854471b774039cf843ef395fad0d 286 Pfam PF01177 Asp/Glu/Hydantoin racemase 13 220 6.1E-34 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_23860 1e18854471b774039cf843ef395fad0d 286 SUPERFAMILY SSF53681 12 114 6.87E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_21940 610387f525333281a9ed6f8ee2a129fe 542 Gene3D G3DSA:3.30.1490.270 348 408 2.5E-23 T 14-10-2018 PACID_21940 610387f525333281a9ed6f8ee2a129fe 542 PIRSF PIRSF005522 1 479 7.8E-188 T 14-10-2018 IPR016450 Uncharacterised conserved protein UCP005522 PACID_21940 610387f525333281a9ed6f8ee2a129fe 542 Gene3D G3DSA:3.40.50.11290 213 311 8.1E-41 T 14-10-2018 PACID_21940 610387f525333281a9ed6f8ee2a129fe 542 Pfam PF14403 Circularly permuted ATP-grasp type 2 76 452 2.7E-156 T 14-10-2018 IPR025841 Circularly permuted ATP-grasp type 2 PACID_21940 610387f525333281a9ed6f8ee2a129fe 542 SUPERFAMILY SSF56059 44 466 3.35E-48 T 14-10-2018 PACID_29540 aeb7a4fea8d8824bb910ff00d5bae1ef 610 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 25 436 18.584 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_29540 aeb7a4fea8d8824bb910ff00d5bae1ef 610 Pfam PF06965 Na+/H+ antiporter 1 27 427 1.4E-113 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_29540 aeb7a4fea8d8824bb910ff00d5bae1ef 610 Gene3D G3DSA:1.20.1530.10 23 435 4.3E-110 T 14-10-2018 IPR023171 Na/H antiporter domain superfamily PACID_29540 aeb7a4fea8d8824bb910ff00d5bae1ef 610 SUPERFAMILY SSF52833 446 609 2.57E-13 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_29540 aeb7a4fea8d8824bb910ff00d5bae1ef 610 Gene3D G3DSA:3.40.30.10 444 610 9.7E-21 T 14-10-2018 PACID_29540 aeb7a4fea8d8824bb910ff00d5bae1ef 610 Pfam PF13462 Thioredoxin 451 610 1.6E-6 T 14-10-2018 IPR012336 Thioredoxin-like fold PACID_29540 aeb7a4fea8d8824bb910ff00d5bae1ef 610 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 30 425 4.9E-82 T 14-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 PACID_18010 46588068260452dc02a5f7789e203521 144 Pfam PF02699 Preprotein translocase subunit 7 83 8.9E-17 T 14-10-2018 IPR003849 Preprotein translocase YajC PACID_18010 46588068260452dc02a5f7789e203521 144 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 5 85 1.2E-14 T 14-10-2018 IPR003849 Preprotein translocase YajC PACID_18010 46588068260452dc02a5f7789e203521 144 SMART SM01323 3 85 1.1E-18 T 14-10-2018 IPR003849 Preprotein translocase YajC PACID_14430 81a616cdc0fe6f1c82e4dd007cc902d5 233 Gene3D G3DSA:3.40.1180.10 1 215 6.7E-89 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 PACID_14430 81a616cdc0fe6f1c82e4dd007cc902d5 233 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 1 220 3.6E-69 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PACID_14430 81a616cdc0fe6f1c82e4dd007cc902d5 233 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 1 221 33.397 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PACID_14430 81a616cdc0fe6f1c82e4dd007cc902d5 233 Pfam PF01255 Putative undecaprenyl diphosphate synthase 1 220 5.5E-74 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 PACID_14430 81a616cdc0fe6f1c82e4dd007cc902d5 233 SUPERFAMILY SSF64005 1 216 2.62E-77 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 PACID_05770 6e99098af5992e0b1ac31d1b5e8b1359 289 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 2.3E-134 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 PACID_05770 6e99098af5992e0b1ac31d1b5e8b1359 289 Gene3D G3DSA:3.90.550.10 1 288 3.3E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_05770 6e99098af5992e0b1ac31d1b5e8b1359 289 SUPERFAMILY SSF53448 1 286 2.14E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_05770 6e99098af5992e0b1ac31d1b5e8b1359 289 Pfam PF00483 Nucleotidyl transferase 3 235 7.8E-61 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PACID_07470 8adf1645135b82b90eb54cd9a8f4a239 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 70 93 2.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_07470 8adf1645135b82b90eb54cd9a8f4a239 235 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 49 62 2.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_07470 8adf1645135b82b90eb54cd9a8f4a239 235 Pfam PF00440 Bacterial regulatory proteins, tetR family 49 92 2.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_07470 8adf1645135b82b90eb54cd9a8f4a239 235 SUPERFAMILY SSF46689 38 109 9.75E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_07470 8adf1645135b82b90eb54cd9a8f4a239 235 Gene3D G3DSA:1.10.357.10 38 232 1.4E-24 T 14-10-2018 PACID_02320 4b03b8beed4d377318476956c5201d33 209 Gene3D G3DSA:1.10.10.10 13 88 1.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_02320 4b03b8beed4d377318476956c5201d33 209 SUPERFAMILY SSF46785 19 191 1.79E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_03100 87a836acc406cb398242038eea89b1a1 367 SUPERFAMILY SSF53187 3 366 6.0E-41 T 14-10-2018 PACID_03100 87a836acc406cb398242038eea89b1a1 367 PIRSF PIRSF037238 1 367 2.0E-89 T 14-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase PACID_03100 87a836acc406cb398242038eea89b1a1 367 Pfam PF07687 Peptidase dimerisation domain 168 264 8.4E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain PACID_03100 87a836acc406cb398242038eea89b1a1 367 Pfam PF01546 Peptidase family M20/M25/M40 68 366 2.3E-22 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 PACID_03100 87a836acc406cb398242038eea89b1a1 367 Gene3D G3DSA:3.30.70.360 171 281 6.0E-94 T 14-10-2018 PACID_03100 87a836acc406cb398242038eea89b1a1 367 Gene3D G3DSA:3.40.630.10 8 357 6.0E-94 T 14-10-2018 PACID_03100 87a836acc406cb398242038eea89b1a1 367 SUPERFAMILY SSF55031 171 266 6.93E-18 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain PACID_03100 87a836acc406cb398242038eea89b1a1 367 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 67 76 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 3.3E-48 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 29.744 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 PIRSF PIRSF002191 1 117 2.4E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 SUPERFAMILY SSF50104 2 114 1.81E-45 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 Gene3D G3DSA:2.30.30.790 4 116 1.0E-14 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 Pfam PF01245 Ribosomal protein L19 3 113 2.7E-49 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 2.2E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 2.2E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_21300 3e9376bd4c4307ae990268e6891afb63 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 2.2E-42 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_06310 257d4a95b151ffffbc4f03222ee4532f 119 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 119 15.635 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PACID_06310 257d4a95b151ffffbc4f03222ee4532f 119 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 115 3.1E-19 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PACID_12370 06bb11056044fed7cf3de97a280e8af6 91 SUPERFAMILY SSF54909 2 78 8.98E-19 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_12370 06bb11056044fed7cf3de97a280e8af6 91 Gene3D G3DSA:3.30.70.920 1 84 3.0E-21 T 14-10-2018 PACID_12370 06bb11056044fed7cf3de97a280e8af6 91 Pfam PF01037 Lrp/AsnC ligand binding domain 6 77 4.6E-16 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain PACID_11220 0a45a244fb375a982269e3d2fa7dc829 342 Gene3D G3DSA:1.20.5.170 1 48 6.5E-16 T 14-10-2018 PACID_11220 0a45a244fb375a982269e3d2fa7dc829 342 SUPERFAMILY SSF52540 4 304 3.62E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_11220 0a45a244fb375a982269e3d2fa7dc829 342 Gene3D G3DSA:1.10.287.130 263 327 1.7E-11 T 14-10-2018 PACID_11220 0a45a244fb375a982269e3d2fa7dc829 342 Gene3D G3DSA:3.40.50.300 49 260 1.4E-76 T 14-10-2018 PACID_11220 0a45a244fb375a982269e3d2fa7dc829 342 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 15 302 4.3E-99 T 14-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 PACID_11220 0a45a244fb375a982269e3d2fa7dc829 342 Pfam PF03308 ArgK protein 20 291 2.3E-100 T 14-10-2018 PACID_19490 c1cf9bee031c4c313c5ec0d87e48427d 500 SUPERFAMILY SSF56801 15 489 2.35E-121 T 14-10-2018 PACID_19490 c1cf9bee031c4c313c5ec0d87e48427d 500 Pfam PF13193 AMP-binding enzyme C-terminal domain 402 476 1.7E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain PACID_19490 c1cf9bee031c4c313c5ec0d87e48427d 500 Pfam PF00501 AMP-binding enzyme 14 391 6.3E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 PACID_19490 c1cf9bee031c4c313c5ec0d87e48427d 500 Gene3D G3DSA:3.40.50.12780 11 385 2.7E-90 T 14-10-2018 PACID_19490 c1cf9bee031c4c313c5ec0d87e48427d 500 Gene3D G3DSA:3.30.300.30 387 489 1.6E-22 T 14-10-2018 PACID_24090 71cb420e108b5767fe9bc7ccace791af 358 Gene3D G3DSA:3.90.550.10 2 352 2.2E-97 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_24090 71cb420e108b5767fe9bc7ccace791af 358 SUPERFAMILY SSF53448 1 279 2.18E-56 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_24090 71cb420e108b5767fe9bc7ccace791af 358 Pfam PF00483 Nucleotidyl transferase 5 278 2.5E-41 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 PACID_24090 71cb420e108b5767fe9bc7ccace791af 358 SUPERFAMILY SSF159283 284 348 7.19E-10 T 14-10-2018 PACID_01240 0b80d2c7885f3d6be49840bc7d168687 261 SUPERFAMILY SSF52540 1 248 4.02E-9 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01240 0b80d2c7885f3d6be49840bc7d168687 261 Gene3D G3DSA:3.40.50.300 2 250 6.9E-13 T 14-10-2018 PACID_21520 23a183a5c61b9329cebc6cc933671756 285 Gene3D G3DSA:3.20.20.100 1 276 1.7E-88 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_21520 23a183a5c61b9329cebc6cc933671756 285 PRINTS PR00069 Aldo-keto reductase signature 205 229 2.2E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_21520 23a183a5c61b9329cebc6cc933671756 285 PRINTS PR00069 Aldo-keto reductase signature 38 62 2.2E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_21520 23a183a5c61b9329cebc6cc933671756 285 PRINTS PR00069 Aldo-keto reductase signature 94 112 2.2E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_21520 23a183a5c61b9329cebc6cc933671756 285 PRINTS PR00069 Aldo-keto reductase signature 134 151 2.2E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_21520 23a183a5c61b9329cebc6cc933671756 285 PRINTS PR00069 Aldo-keto reductase signature 168 197 2.2E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_21520 23a183a5c61b9329cebc6cc933671756 285 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 134 151 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PACID_21520 23a183a5c61b9329cebc6cc933671756 285 Pfam PF00248 Aldo/keto reductase family 18 269 2.4E-42 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_21520 23a183a5c61b9329cebc6cc933671756 285 SUPERFAMILY SSF51430 7 270 8.64E-77 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_21520 23a183a5c61b9329cebc6cc933671756 285 PIRSF PIRSF000097 1 278 1.9E-66 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_32720 77edc3ccaa7a10d3a8bce9a9ce56e628 242 SUPERFAMILY SSF46785 90 220 3.89E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_32720 77edc3ccaa7a10d3a8bce9a9ce56e628 242 Gene3D G3DSA:1.10.10.10 78 222 1.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_32720 77edc3ccaa7a10d3a8bce9a9ce56e628 242 SMART SM00347 108 208 6.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_32720 77edc3ccaa7a10d3a8bce9a9ce56e628 242 PRINTS PR00598 Bacterial regulatory protein MarR family signature 149 164 1.7E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_32720 77edc3ccaa7a10d3a8bce9a9ce56e628 242 PRINTS PR00598 Bacterial regulatory protein MarR family signature 132 148 1.7E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_32720 77edc3ccaa7a10d3a8bce9a9ce56e628 242 PRINTS PR00598 Bacterial regulatory protein MarR family signature 168 184 1.7E-5 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_32720 77edc3ccaa7a10d3a8bce9a9ce56e628 242 Pfam PF12802 MarR family 114 172 4.0E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_03080 9b1352478d1f342c1bc90b54f6c1ee86 250 Gene3D G3DSA:3.40.50.10490 27 209 2.3E-19 T 14-10-2018 PACID_03080 9b1352478d1f342c1bc90b54f6c1ee86 250 Pfam PF01380 SIS domain 63 185 8.0E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PACID_03080 9b1352478d1f342c1bc90b54f6c1ee86 250 SUPERFAMILY SSF53697 31 189 1.09E-13 T 14-10-2018 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 Gene3D G3DSA:3.20.20.150 5 448 4.0E-166 T 14-10-2018 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 6 441 1.4E-192 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 SUPERFAMILY SSF51658 5 443 8.34E-149 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 Pfam PF01261 Xylose isomerase-like TIM barrel 89 284 1.8E-7 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 Hamap MF_00455 Xylose isomerase [xylA]. 10 441 50.177 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 180 201 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 271 298 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 300 311 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 92 114 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 133 153 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 207 226 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 229 253 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 334 345 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_03490 2903488bf8ef60e3674030a8eca3fabd 448 PRINTS PR00688 Xylose isomerase signature 156 175 3.8E-87 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 Gene3D G3DSA:3.40.1380.20 339 469 5.3E-166 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 Pfam PF02887 Pyruvate kinase, alpha/beta domain 360 471 3.6E-23 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 SUPERFAMILY SSF51621 2 341 4.19E-91 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 SUPERFAMILY SSF50800 70 171 6.28E-27 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 Gene3D G3DSA:3.20.20.60 2 338 5.3E-166 T 14-10-2018 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 PRINTS PR01050 Pyruvate kinase family signature 247 271 8.0E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 PRINTS PR01050 Pyruvate kinase family signature 190 204 8.0E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 PRINTS PR01050 Pyruvate kinase family signature 316 332 8.0E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 PRINTS PR01050 Pyruvate kinase family signature 297 315 8.0E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 PRINTS PR01050 Pyruvate kinase family signature 220 246 8.0E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 PRINTS PR01050 Pyruvate kinase family signature 272 296 8.0E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.0E-62 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 14-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 Gene3D G3DSA:2.40.33.10 70 172 5.3E-166 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 473 6.2E-154 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 SUPERFAMILY SSF52935 326 473 4.06E-32 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_12960 fd1eb4dd78fe7829c137d4e0221eaffc 476 Pfam PF00224 Pyruvate kinase, barrel domain 2 340 7.3E-123 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 PACID_32750 e896f0513205c20994c595aee6e4866d 488 ProSitePatterns PS00218 Amino acid permeases signature. 53 83 - T 14-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 PACID_32750 e896f0513205c20994c595aee6e4866d 488 Pfam PF00324 Amino acid permease 28 427 3.2E-100 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 PACID_32750 e896f0513205c20994c595aee6e4866d 488 Gene3D G3DSA:1.20.1740.10 23 464 4.3E-70 T 14-10-2018 PACID_32750 e896f0513205c20994c595aee6e4866d 488 PIRSF PIRSF006060 6 466 1.8E-78 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 PACID_04130 89cca616a448b2abe5be2ad4936f7222 276 SUPERFAMILY SSF51621 1 194 1.63E-83 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 PACID_04130 89cca616a448b2abe5be2ad4936f7222 276 Gene3D G3DSA:3.20.20.70 1 249 5.0E-121 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_04130 89cca616a448b2abe5be2ad4936f7222 276 Pfam PF09370 Phosphoenolpyruvate hydrolase-like 5 271 1.3E-130 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like PACID_04130 89cca616a448b2abe5be2ad4936f7222 276 PIRSF PIRSF034452 1 274 4.9E-142 T 14-10-2018 IPR009215 TIM-barrel domain, IGPS-like PACID_13030 19d752c46477f49f3e3beeefc6bd38f4 241 Gene3D G3DSA:2.40.260.10 79 240 1.0E-10 T 14-10-2018 IPR023365 Sortase domain superfamily PACID_13030 19d752c46477f49f3e3beeefc6bd38f4 241 Pfam PF04203 Sortase family 93 238 5.8E-8 T 14-10-2018 IPR005754 Sortase family PACID_16810 0aec35496aa37cb1f17594e11de3fded 246 Gene3D G3DSA:2.40.420.20 224 235 9.8E-7 T 14-10-2018 PACID_16810 0aec35496aa37cb1f17594e11de3fded 246 Pfam PF13533 Biotin-lipoyl like 40 86 5.6E-8 T 14-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain PACID_16810 0aec35496aa37cb1f17594e11de3fded 246 Gene3D G3DSA:2.40.50.100 108 144 9.8E-7 T 14-10-2018 PACID_16810 0aec35496aa37cb1f17594e11de3fded 246 Gene3D G3DSA:2.40.30.170 145 223 9.8E-7 T 14-10-2018 PACID_16810 0aec35496aa37cb1f17594e11de3fded 246 Pfam PF13437 HlyD family secretion protein 109 193 3.8E-7 T 14-10-2018 PACID_16810 0aec35496aa37cb1f17594e11de3fded 246 Gene3D G3DSA:2.40.50.100 45 78 3.2E-7 T 14-10-2018 PACID_30260 c5d5a034e54a469f4d3929d0fe2844f2 349 SUPERFAMILY SSF51735 141 311 2.37E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30260 c5d5a034e54a469f4d3929d0fe2844f2 349 Gene3D G3DSA:3.90.180.10 26 326 5.4E-94 T 14-10-2018 PACID_30260 c5d5a034e54a469f4d3929d0fe2844f2 349 Gene3D G3DSA:3.40.50.720 152 284 5.4E-94 T 14-10-2018 PACID_30260 c5d5a034e54a469f4d3929d0fe2844f2 349 Pfam PF00107 Zinc-binding dehydrogenase 175 287 1.0E-20 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 PACID_30260 c5d5a034e54a469f4d3929d0fe2844f2 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 133 5.8E-30 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 PACID_30260 c5d5a034e54a469f4d3929d0fe2844f2 349 SMART SM00829 11 343 0.0015 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 PACID_30260 c5d5a034e54a469f4d3929d0fe2844f2 349 SUPERFAMILY SSF50129 3 177 9.75E-54 T 14-10-2018 IPR011032 GroES-like superfamily PACID_23840 f0273581e4179c7472cc8b80d09d373e 210 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 192 1.6E-44 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 PACID_23840 f0273581e4179c7472cc8b80d09d373e 210 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 199 44.976 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 PACID_23840 f0273581e4179c7472cc8b80d09d373e 210 Pfam PF01725 Ham1 family 4 194 1.5E-53 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 PACID_23840 f0273581e4179c7472cc8b80d09d373e 210 Gene3D G3DSA:3.90.950.10 1 200 4.0E-65 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PACID_23840 f0273581e4179c7472cc8b80d09d373e 210 SUPERFAMILY SSF52972 3 195 1.15E-56 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like PACID_27590 2e259ca407a6c84b514154a9f0ac37f5 302 Gene3D G3DSA:3.90.79.10 7 137 4.8E-35 T 14-10-2018 PACID_27590 2e259ca407a6c84b514154a9f0ac37f5 302 SMART SM00855 141 265 6.7E-13 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_27590 2e259ca407a6c84b514154a9f0ac37f5 302 Pfam PF00293 NUDIX domain 10 127 1.2E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_27590 2e259ca407a6c84b514154a9f0ac37f5 302 SUPERFAMILY SSF55811 3 135 8.8E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_27590 2e259ca407a6c84b514154a9f0ac37f5 302 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 142 245 4.6E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_27590 2e259ca407a6c84b514154a9f0ac37f5 302 SUPERFAMILY SSF53254 140 288 1.33E-17 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_27590 2e259ca407a6c84b514154a9f0ac37f5 302 ProSitePatterns PS00893 Nudix box signature. 41 62 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PACID_27590 2e259ca407a6c84b514154a9f0ac37f5 302 Gene3D G3DSA:3.40.50.1240 141 302 9.2E-36 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 PRINTS PR01249 Ribosomal protein L31 signature 70 88 1.2E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 PRINTS PR01249 Ribosomal protein L31 signature 55 70 1.2E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 PRINTS PR01249 Ribosomal protein L31 signature 25 42 1.2E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 ProSitePatterns PS01143 Ribosomal protein L31 signature. 59 80 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 Gene3D G3DSA:2.30.170.50 24 94 2.7E-31 T 14-10-2018 PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 Pfam PF01197 Ribosomal protein L31 24 89 6.3E-32 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 24 92 31.322 T 14-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 SUPERFAMILY SSF143800 24 90 3.73E-26 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_19670 09e95ebb4b905f091e6a0fe72f2c5d8d 95 TIGRFAM TIGR00105 L31: ribosomal protein bL31 24 90 6.6E-35 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_12940 1d07ca133c972eed675adab3b3b1866a 213 Pfam PF01252 Signal peptidase (SPase) II 50 189 3.4E-27 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PACID_12940 1d07ca133c972eed675adab3b3b1866a 213 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 131 146 3.0E-10 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PACID_12940 1d07ca133c972eed675adab3b3b1866a 213 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 88 96 3.0E-10 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PACID_12940 1d07ca133c972eed675adab3b3b1866a 213 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 169 185 3.0E-10 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PACID_12940 1d07ca133c972eed675adab3b3b1866a 213 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 41 194 13.278 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 PACID_15050 1bf28f0fa4030e0c28e4897e76f686dc 153 Gene3D G3DSA:1.10.1510.10 3 93 6.8E-24 T 14-10-2018 PACID_15050 1bf28f0fa4030e0c28e4897e76f686dc 153 SUPERFAMILY SSF89095 5 152 5.23E-36 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 PACID_15050 1bf28f0fa4030e0c28e4897e76f686dc 153 Pfam PF09424 Yqey-like protein 5 152 2.8E-42 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 PACID_15050 1bf28f0fa4030e0c28e4897e76f686dc 153 Gene3D G3DSA:1.10.10.410 94 153 3.8E-14 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal PACID_22300 e2de0bc16ccd207e605a7181b08b86f7 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 4.1E-59 T 14-10-2018 PACID_22300 e2de0bc16ccd207e605a7181b08b86f7 257 SUPERFAMILY SSF51735 5 253 5.04E-40 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_22300 e2de0bc16ccd207e605a7181b08b86f7 257 Gene3D G3DSA:3.40.50.720 1 255 1.5E-38 T 14-10-2018 PACID_22300 e2de0bc16ccd207e605a7181b08b86f7 257 PIRSF PIRSF000094 1 257 3.3E-70 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 PACID_12790 4323833f08d52061e7dea6ef1a3e9c9e 631 Gene3D G3DSA:3.30.450.330 281 609 4.6E-92 T 14-10-2018 PACID_12790 4323833f08d52061e7dea6ef1a3e9c9e 631 Gene3D G3DSA:3.90.1310.30 81 280 4.4E-33 T 14-10-2018 PACID_12790 4323833f08d52061e7dea6ef1a3e9c9e 631 Pfam PF03717 Penicillin-binding Protein dimerisation domain 89 260 1.4E-16 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PACID_12790 4323833f08d52061e7dea6ef1a3e9c9e 631 SUPERFAMILY SSF56601 230 618 8.71E-77 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_12790 4323833f08d52061e7dea6ef1a3e9c9e 631 SUPERFAMILY SSF56519 85 275 9.42E-34 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 PACID_12790 4323833f08d52061e7dea6ef1a3e9c9e 631 Pfam PF00905 Penicillin binding protein transpeptidase domain 306 606 2.1E-69 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PACID_12790 4323833f08d52061e7dea6ef1a3e9c9e 631 Gene3D G3DSA:3.40.710.10 340 532 4.6E-92 T 14-10-2018 PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 Hamap MF_00109 Shikimate kinase [aroK]. 12 176 23.986 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 SUPERFAMILY SSF52540 11 174 1.16E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 PRINTS PR01100 Shikimate kinase family signature 104 121 5.0E-14 T 14-10-2018 PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 PRINTS PR01100 Shikimate kinase family signature 84 93 5.0E-14 T 14-10-2018 PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 PRINTS PR01100 Shikimate kinase family signature 39 52 5.0E-14 T 14-10-2018 PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 PRINTS PR01100 Shikimate kinase family signature 15 30 5.0E-14 T 14-10-2018 PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 PRINTS PR01100 Shikimate kinase family signature 67 75 5.0E-14 T 14-10-2018 PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 Pfam PF01202 Shikimate kinase 21 175 1.7E-35 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PACID_17750 70374883be78b653cf1fed57e7ecbeff 185 Gene3D G3DSA:3.40.50.300 13 178 5.0E-45 T 14-10-2018 PACID_13780 3dd9c268e5cbf79be0b96a8ed85c99eb 292 Pfam PF12836 Helix-hairpin-helix motif 230 291 7.3E-21 T 14-10-2018 PACID_13780 3dd9c268e5cbf79be0b96a8ed85c99eb 292 Gene3D G3DSA:3.10.560.10 125 239 1.2E-6 T 14-10-2018 PACID_13780 3dd9c268e5cbf79be0b96a8ed85c99eb 292 Gene3D G3DSA:1.10.150.310 240 292 1.3E-12 T 14-10-2018 PACID_13780 3dd9c268e5cbf79be0b96a8ed85c99eb 292 Pfam PF10531 SLBB domain 133 177 5.1E-8 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_13780 3dd9c268e5cbf79be0b96a8ed85c99eb 292 SMART SM00278 270 289 0.043 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PACID_13780 3dd9c268e5cbf79be0b96a8ed85c99eb 292 SMART SM00278 240 259 0.02 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 PACID_13780 3dd9c268e5cbf79be0b96a8ed85c99eb 292 SUPERFAMILY SSF47781 221 290 9.23E-25 T 14-10-2018 IPR010994 RuvA domain 2-like PACID_03330 64268c34907504b0e3d4e51c4bcc922f 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 60 7.9E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_03330 64268c34907504b0e3d4e51c4bcc922f 222 SUPERFAMILY SSF46689 6 73 7.18E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_03330 64268c34907504b0e3d4e51c4bcc922f 222 Gene3D G3DSA:1.10.357.10 1 214 3.7E-16 T 14-10-2018 PACID_06960 5ce97631afda62d1188014997902862b 283 Gene3D G3DSA:2.70.98.10 7 280 1.0E-48 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PACID_06960 5ce97631afda62d1188014997902862b 283 SUPERFAMILY SSF74650 18 278 4.46E-47 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PACID_06960 5ce97631afda62d1188014997902862b 283 Pfam PF01263 Aldose 1-epimerase 20 278 9.9E-23 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PACID_06380 f3437555f88353914c26cdba68fcaf00 153 Pfam PF01161 Phosphatidylethanolamine-binding protein 15 150 1.6E-34 T 14-10-2018 IPR008914 Phosphatidylethanolamine-binding protein PACID_06380 f3437555f88353914c26cdba68fcaf00 153 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 23 150 8.2E-32 T 14-10-2018 IPR005247 YbhB/YbcL PACID_06380 f3437555f88353914c26cdba68fcaf00 153 Gene3D G3DSA:3.90.280.10 1 152 2.7E-48 T 14-10-2018 IPR036610 PEBP-like superfamily PACID_06380 f3437555f88353914c26cdba68fcaf00 153 SUPERFAMILY SSF49777 2 151 3.53E-42 T 14-10-2018 IPR036610 PEBP-like superfamily PACID_17260 d566c7dda05b84df636381bb972bc543 121 SUPERFAMILY SSF54593 1 118 2.28E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_17260 d566c7dda05b84df636381bb972bc543 121 Gene3D G3DSA:3.10.180.10 1 118 1.3E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_17320 9c21c5a13594645ec264daa17783dddd 469 Gene3D G3DSA:3.40.50.150 260 469 1.9E-64 T 14-10-2018 PACID_17320 9c21c5a13594645ec264daa17783dddd 469 TIGRFAM TIGR04074 bacter_Hen1: 3' terminal RNA ribose 2'-O-methyltransferase Hen1 5 466 2.1E-186 T 14-10-2018 IPR024026 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial PACID_17320 9c21c5a13594645ec264daa17783dddd 469 SUPERFAMILY SSF53335 276 435 5.87E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_17320 9c21c5a13594645ec264daa17783dddd 469 Pfam PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 4 249 2.4E-101 T 14-10-2018 IPR024740 Hen1, N-terminal PACID_17320 9c21c5a13594645ec264daa17783dddd 469 Gene3D G3DSA:3.30.1610.20 4 238 4.9E-91 T 14-10-2018 IPR038546 Hen1, N-terminal domain superfamily PACID_17320 9c21c5a13594645ec264daa17783dddd 469 Pfam PF13489 Methyltransferase domain 278 435 9.9E-11 T 14-10-2018 PACID_12640 85181ad3b510080f451cdd44107945e0 177 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 167 2.6E-58 T 14-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 PACID_12640 85181ad3b510080f451cdd44107945e0 177 Gene3D G3DSA:3.40.50.300 1 173 1.9E-61 T 14-10-2018 PACID_12640 85181ad3b510080f451cdd44107945e0 177 Pfam PF01202 Shikimate kinase 17 123 2.5E-11 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 PACID_12640 85181ad3b510080f451cdd44107945e0 177 SUPERFAMILY SSF52540 6 170 2.28E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_04670 bb5a284b9a2a10dcde2b0c108e101600 455 Pfam PF04932 O-Antigen ligase 201 338 1.2E-13 T 14-10-2018 IPR007016 O-antigen ligase-related PACID_00730 0eb0ea88e4aec4f2caf12e3e1ba4e1ca 477 SUPERFAMILY SSF49299 333 412 2.49E-7 T 14-10-2018 IPR035986 PKD domain superfamily PACID_00730 0eb0ea88e4aec4f2caf12e3e1ba4e1ca 477 Pfam PF00801 PKD domain 333 403 1.7E-5 T 14-10-2018 IPR000601 PKD domain PACID_00730 0eb0ea88e4aec4f2caf12e3e1ba4e1ca 477 SUPERFAMILY SSF103647 410 448 2.35E-6 T 14-10-2018 IPR028974 TSP type-3 repeat GO:0005509 Reactome: R-HSA-186797 PACID_00730 0eb0ea88e4aec4f2caf12e3e1ba4e1ca 477 SUPERFAMILY SSF52266 2 298 1.23E-33 T 14-10-2018 PACID_00730 0eb0ea88e4aec4f2caf12e3e1ba4e1ca 477 Gene3D G3DSA:3.40.50.1110 2 300 7.8E-46 T 14-10-2018 IPR036514 SGNH hydrolase superfamily PACID_00730 0eb0ea88e4aec4f2caf12e3e1ba4e1ca 477 SMART SM00089 328 414 0.0078 T 14-10-2018 IPR022409 PKD/Chitinase domain PACID_00730 0eb0ea88e4aec4f2caf12e3e1ba4e1ca 477 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 241 1.2E-8 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain PACID_00730 0eb0ea88e4aec4f2caf12e3e1ba4e1ca 477 Gene3D G3DSA:2.60.40.10 320 413 3.2E-12 T 14-10-2018 IPR013783 Immunoglobulin-like fold PACID_05860 9924dbc57d6c24722edf31e1a1dd80a4 63 SUPERFAMILY SSF54786 4 50 9.42E-9 T 14-10-2018 PACID_05860 9924dbc57d6c24722edf31e1a1dd80a4 63 Gene3D G3DSA:3.30.920.30 1 53 3.7E-9 T 14-10-2018 IPR038570 HicA superfamily PACID_05860 9924dbc57d6c24722edf31e1a1dd80a4 63 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 4 49 2.2E-9 T 14-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 PACID_05490 983d4551f330213624aa6dad4868013f 193 Gene3D G3DSA:3.40.50.360 32 167 5.2E-19 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PACID_05490 983d4551f330213624aa6dad4868013f 193 SUPERFAMILY SSF52218 30 187 3.8E-14 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PACID_07890 420ce20d1467d2c99ae5f6a36b94bc04 486 Pfam PF02706 Chain length determinant protein 10 96 1.8E-6 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 PACID_07890 420ce20d1467d2c99ae5f6a36b94bc04 486 Gene3D G3DSA:3.40.50.300 201 455 1.1E-68 T 14-10-2018 PACID_07890 420ce20d1467d2c99ae5f6a36b94bc04 486 SUPERFAMILY SSF52540 267 446 1.58E-38 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07890 420ce20d1467d2c99ae5f6a36b94bc04 486 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 249 452 1.2E-50 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 PACID_07890 420ce20d1467d2c99ae5f6a36b94bc04 486 Pfam PF13614 AAA domain 270 416 5.7E-13 T 14-10-2018 IPR025669 AAA domain PACID_14990 1cdfcce6ec1e7421e8d4a054c661ed4a 305 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 1.5E-33 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain PACID_14990 1cdfcce6ec1e7421e8d4a054c661ed4a 305 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 177 298 2.2E-22 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain PACID_14990 1cdfcce6ec1e7421e8d4a054c661ed4a 305 Gene3D G3DSA:1.10.1040.10 177 299 1.4E-26 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_14990 1cdfcce6ec1e7421e8d4a054c661ed4a 305 SUPERFAMILY SSF48179 177 299 4.42E-27 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_14990 1cdfcce6ec1e7421e8d4a054c661ed4a 305 SUPERFAMILY SSF51735 1 183 2.57E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_14990 1cdfcce6ec1e7421e8d4a054c661ed4a 305 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 300 9.0E-66 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 PACID_14990 1cdfcce6ec1e7421e8d4a054c661ed4a 305 Gene3D G3DSA:3.40.50.720 1 176 4.0E-49 T 14-10-2018 PACID_32100 f533ba5a60493f738a800a17ffdb7bc3 681 Gene3D G3DSA:3.20.20.70 294 606 6.7E-88 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_32100 f533ba5a60493f738a800a17ffdb7bc3 681 SUPERFAMILY SSF51445 308 628 1.24E-58 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_32100 f533ba5a60493f738a800a17ffdb7bc3 681 Gene3D G3DSA:2.70.98.60 66 289 1.7E-9 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_32100 f533ba5a60493f738a800a17ffdb7bc3 681 PRINTS PR00743 Glycosyl hydrolase family 36 signature 340 355 2.4E-8 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_32100 f533ba5a60493f738a800a17ffdb7bc3 681 PRINTS PR00743 Glycosyl hydrolase family 36 signature 497 513 2.4E-8 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_32100 f533ba5a60493f738a800a17ffdb7bc3 681 PRINTS PR00743 Glycosyl hydrolase family 36 signature 390 412 2.4E-8 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_32100 f533ba5a60493f738a800a17ffdb7bc3 681 PRINTS PR00743 Glycosyl hydrolase family 36 signature 448 463 2.4E-8 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_32100 f533ba5a60493f738a800a17ffdb7bc3 681 Pfam PF02065 Melibiase 274 606 4.6E-42 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_15470 a825387f45fb2fc4fc1a831c96ce291a 388 Gene3D G3DSA:3.30.1120.70 195 245 2.1E-9 T 14-10-2018 PACID_15470 a825387f45fb2fc4fc1a831c96ce291a 388 Gene3D G3DSA:1.20.1270.210 37 277 2.1E-9 T 14-10-2018 PACID_15470 a825387f45fb2fc4fc1a831c96ce291a 388 Pfam PF04860 Phage portal protein 41 356 5.2E-47 T 14-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein PACID_15470 a825387f45fb2fc4fc1a831c96ce291a 388 Gene3D G3DSA:2.40.500.30 58 159 2.1E-9 T 14-10-2018 PACID_09720 81b8eac0db92fcdaa31992179ef68f8b 202 SUPERFAMILY SSF46689 7 82 2.21E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_09720 81b8eac0db92fcdaa31992179ef68f8b 202 SUPERFAMILY SSF48498 77 187 5.5E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_09720 81b8eac0db92fcdaa31992179ef68f8b 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 4.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09720 81b8eac0db92fcdaa31992179ef68f8b 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 4.2E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09720 81b8eac0db92fcdaa31992179ef68f8b 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 52 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_09720 81b8eac0db92fcdaa31992179ef68f8b 202 Gene3D G3DSA:1.10.357.10 5 187 5.6E-38 T 14-10-2018 PACID_17460 965e2258124c29b7c4e5d3602631245f 716 Gene3D G3DSA:3.40.50.300 494 611 3.9E-7 T 14-10-2018 PACID_17460 965e2258124c29b7c4e5d3602631245f 716 SUPERFAMILY SSF52540 190 715 2.04E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17460 965e2258124c29b7c4e5d3602631245f 716 Gene3D G3DSA:3.40.50.300 187 255 5.8E-9 T 14-10-2018 PACID_27770 223dc3db66dbba4e565dbc2261fcdbab 327 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 183 223 5.4E-14 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria PACID_23600 f09accf4966f3f5d3072dc6f5ca3d719 285 Gene3D G3DSA:3.40.50.300 14 253 2.4E-68 T 14-10-2018 PACID_23600 f09accf4966f3f5d3072dc6f5ca3d719 285 Pfam PF00005 ABC transporter 36 178 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_23600 f09accf4966f3f5d3072dc6f5ca3d719 285 SUPERFAMILY SSF52540 13 239 3.2E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_23600 f09accf4966f3f5d3072dc6f5ca3d719 285 SMART SM00382 44 231 5.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_09690 528f0eeb17d6489867f50181c1b3777d 178 Gene3D G3DSA:1.10.260.40 5 127 4.1E-6 T 14-10-2018 PACID_04020 7bfa62acc295846e444ca176833381b4 178 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 39 165 4.5E-40 T 14-10-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 PACID_04020 7bfa62acc295846e444ca176833381b4 178 Gene3D G3DSA:3.40.30.10 39 148 1.2E-37 T 14-10-2018 PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 SUPERFAMILY SSF51735 6 243 3.29E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 Pfam PF00106 short chain dehydrogenase 10 204 1.6E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 184 201 4.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 4.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 137 153 4.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 182 4.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 4.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 4.8E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 150 178 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 199 3.3E-4 T 14-10-2018 PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 3.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 182 3.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 3.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30150 50f1b6b7dadbe207a912cb29bfed08d0 253 Gene3D G3DSA:3.40.50.720 4 251 1.6E-69 T 14-10-2018 PACID_33980 107569e47746690eaec07837cd25342e 330 Pfam PF01261 Xylose isomerase-like TIM barrel 24 234 2.7E-29 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PACID_33980 107569e47746690eaec07837cd25342e 330 SUPERFAMILY SSF51658 1 328 1.05E-46 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_33980 107569e47746690eaec07837cd25342e 330 Gene3D G3DSA:3.20.20.150 1 327 6.2E-66 T 14-10-2018 PACID_29410 559d23cc85bd9e22d69a32c28ac74794 205 SUPERFAMILY SSF52540 19 167 2.62E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_29410 559d23cc85bd9e22d69a32c28ac74794 205 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 24 178 5.4E-8 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 PACID_29410 559d23cc85bd9e22d69a32c28ac74794 205 Gene3D G3DSA:3.40.50.300 3 204 9.4E-52 T 14-10-2018 PACID_21920 1058a8fa899b32e7e4e87c0fc66763a2 280 SMART SM00460 167 234 1.8E-14 T 14-10-2018 IPR002931 Transglutaminase-like PACID_21920 1058a8fa899b32e7e4e87c0fc66763a2 280 Pfam PF08379 Bacterial transglutaminase-like N-terminal region 5 81 1.3E-18 T 14-10-2018 IPR013589 Bacterial transglutaminase-like, N-terminal PACID_21920 1058a8fa899b32e7e4e87c0fc66763a2 280 Pfam PF01841 Transglutaminase-like superfamily 138 232 8.7E-19 T 14-10-2018 IPR002931 Transglutaminase-like PACID_21920 1058a8fa899b32e7e4e87c0fc66763a2 280 SUPERFAMILY SSF54001 9 261 9.03E-37 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PACID_21920 1058a8fa899b32e7e4e87c0fc66763a2 280 Gene3D G3DSA:3.10.620.30 81 271 8.3E-46 T 14-10-2018 PACID_23850 a9f42bad7da5c6e4676bc75a4e9204fa 247 Hamap MF_00564 Ribonuclease PH [rph]. 18 244 41.784 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 PACID_23850 a9f42bad7da5c6e4676bc75a4e9204fa 247 SUPERFAMILY SSF55666 158 243 1.7E-22 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_23850 a9f42bad7da5c6e4676bc75a4e9204fa 247 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 9 243 5.1E-108 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 PACID_23850 a9f42bad7da5c6e4676bc75a4e9204fa 247 ProSitePatterns PS01277 Ribonuclease PH signature. 123 135 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site PACID_23850 a9f42bad7da5c6e4676bc75a4e9204fa 247 SUPERFAMILY SSF54211 4 188 2.02E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold PACID_23850 a9f42bad7da5c6e4676bc75a4e9204fa 247 Pfam PF03725 3' exoribonuclease family, domain 2 166 231 3.8E-9 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_23850 a9f42bad7da5c6e4676bc75a4e9204fa 247 Gene3D G3DSA:3.30.230.70 17 244 1.1E-54 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_23850 a9f42bad7da5c6e4676bc75a4e9204fa 247 Pfam PF01138 3' exoribonuclease family, domain 1 17 147 4.1E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 PACID_28150 4c38782076956d17ad1154f1d4e9f557 369 SUPERFAMILY SSF51726 28 368 2.09E-84 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PACID_28150 4c38782076956d17ad1154f1d4e9f557 369 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 28 368 6.1E-108 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PACID_28150 4c38782076956d17ad1154f1d4e9f557 369 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 29 368 1.4E-101 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PACID_28150 4c38782076956d17ad1154f1d4e9f557 369 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 42 51 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PACID_28150 4c38782076956d17ad1154f1d4e9f557 369 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 26 369 40.232 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 PACID_28150 4c38782076956d17ad1154f1d4e9f557 369 Gene3D G3DSA:3.20.20.210 20 369 1.4E-120 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 PACID_15280 e93c98f593ad1ba9170137587b70445b 305 Gene3D G3DSA:2.70.98.10 18 304 2.8E-66 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 PACID_15280 e93c98f593ad1ba9170137587b70445b 305 SUPERFAMILY SSF74650 19 303 1.38E-57 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PACID_15280 e93c98f593ad1ba9170137587b70445b 305 Pfam PF01263 Aldose 1-epimerase 19 294 9.9E-42 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 PACID_27060 e11f89c431bf8cf033bfdb6a37988638 465 SUPERFAMILY SSF49478 52 103 3.14E-5 T 14-10-2018 PACID_27060 e11f89c431bf8cf033bfdb6a37988638 465 Pfam PF02653 Branched-chain amino acid transport system / permease component 184 450 8.6E-42 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_12610 6b0f9c944862f0a99480e2588c3b0787 157 Gene3D G3DSA:2.60.40.790 7 145 3.9E-31 T 14-10-2018 IPR008978 HSP20-like chaperone PACID_12610 6b0f9c944862f0a99480e2588c3b0787 157 Pfam PF00011 Hsp20/alpha crystallin family 49 144 1.4E-19 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain PACID_12610 6b0f9c944862f0a99480e2588c3b0787 157 SUPERFAMILY SSF49764 21 145 1.31E-30 T 14-10-2018 IPR008978 HSP20-like chaperone PACID_10700 b6660263ba4d40e2944290452e82a528 111 SMART SM00530 27 82 5.4E-8 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_10700 b6660263ba4d40e2944290452e82a528 111 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 19 92 4.8E-31 T 14-10-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 PACID_10700 b6660263ba4d40e2944290452e82a528 111 Pfam PF01381 Helix-turn-helix 35 81 2.9E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_10700 b6660263ba4d40e2944290452e82a528 111 SUPERFAMILY SSF47413 22 104 1.08E-26 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_10700 b6660263ba4d40e2944290452e82a528 111 Gene3D G3DSA:1.10.260.40 11 109 1.7E-33 T 14-10-2018 PACID_12820 3491ec09a65ac67634c0f35f52f1ec84 354 Pfam PF00953 Glycosyl transferase family 4 82 272 4.7E-37 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 PACID_12820 3491ec09a65ac67634c0f35f52f1ec84 354 ProSitePatterns PS01348 MraY family signature 2. 175 186 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_12820 3491ec09a65ac67634c0f35f52f1ec84 354 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 46 58 7.5E-5 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_12820 3491ec09a65ac67634c0f35f52f1ec84 354 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 3 347 22.852 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_12820 3491ec09a65ac67634c0f35f52f1ec84 354 ProSitePatterns PS01347 MraY family signature 1. 46 58 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_12820 3491ec09a65ac67634c0f35f52f1ec84 354 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 20 343 2.6E-95 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_32840 d89ca4cf8436220b07fc793dc6981313 205 Gene3D G3DSA:1.10.357.10 1 201 4.0E-27 T 14-10-2018 PACID_32840 d89ca4cf8436220b07fc793dc6981313 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 42 5.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_32840 d89ca4cf8436220b07fc793dc6981313 205 SUPERFAMILY SSF46689 2 55 1.13E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_07580 2cd12765b03da8e90f23c63b0dcf01c2 112 Pfam PF11611 Domain of unknown function (DUF4352) 19 104 4.4E-15 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 PACID_07580 2cd12765b03da8e90f23c63b0dcf01c2 112 Gene3D G3DSA:2.60.40.1240 6 109 4.1E-14 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 14 440 36.508 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 28 408 6.0E-109 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 Pfam PF01566 Natural resistance-associated macrophage protein 50 414 2.9E-119 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 137 156 1.7E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 384 403 1.7E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 109 135 1.7E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 322 341 1.7E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 162 183 1.7E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 350 367 1.7E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_02060 af00d961c84e9c69985c67c3001d22b1 441 PRINTS PR00447 Natural resistance-associated macrophage protein signature 213 236 1.7E-60 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 PACID_05890 f8df2d2ab333bd30e19e99e31b3c81a0 477 Pfam PF00083 Sugar (and other) transporter 30 462 1.6E-38 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_05890 f8df2d2ab333bd30e19e99e31b3c81a0 477 Gene3D G3DSA:1.20.1250.20 20 469 1.4E-67 T 14-10-2018 PACID_05890 f8df2d2ab333bd30e19e99e31b3c81a0 477 SUPERFAMILY SSF103473 13 457 2.88E-63 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_05970 7a0c6b205e755fa8760d4481819ff6cf 538 Pfam PF01061 ABC-2 type transporter 66 236 1.8E-7 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PACID_16560 0f577af30f61a066a4a7284c02d681c3 421 SUPERFAMILY SSF53756 46 416 1.08E-64 T 14-10-2018 PACID_16560 0f577af30f61a066a4a7284c02d681c3 421 Pfam PF13692 Glycosyl transferases group 1 244 380 2.3E-26 T 14-10-2018 PACID_16560 0f577af30f61a066a4a7284c02d681c3 421 Pfam PF13439 Glycosyltransferase Family 4 55 226 3.0E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_16560 0f577af30f61a066a4a7284c02d681c3 421 Gene3D G3DSA:3.40.50.2000 52 411 3.8E-87 T 14-10-2018 PACID_16560 0f577af30f61a066a4a7284c02d681c3 421 Gene3D G3DSA:3.40.50.2000 224 398 3.8E-87 T 14-10-2018 PACID_33380 6a6433089b2b438d2974a1ae645b707a 418 Gene3D G3DSA:1.10.3080.10 3 415 2.2E-51 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 PACID_33380 6a6433089b2b438d2974a1ae645b707a 418 SUPERFAMILY SSF81340 5 406 1.31E-55 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 PACID_33380 6a6433089b2b438d2974a1ae645b707a 418 PRINTS PR00762 Chloride channel signature 153 172 1.8E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_33380 6a6433089b2b438d2974a1ae645b707a 418 PRINTS PR00762 Chloride channel signature 322 342 1.8E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_33380 6a6433089b2b438d2974a1ae645b707a 418 PRINTS PR00762 Chloride channel signature 102 121 1.8E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_33380 6a6433089b2b438d2974a1ae645b707a 418 PRINTS PR00762 Chloride channel signature 354 370 1.8E-14 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_33380 6a6433089b2b438d2974a1ae645b707a 418 Pfam PF00654 Voltage gated chloride channel 62 400 4.4E-51 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_04360 b2871df294f8db90c172edab484e9259 347 SUPERFAMILY SSF54631 206 343 7.83E-26 T 14-10-2018 PACID_04360 b2871df294f8db90c172edab484e9259 347 Pfam PF00571 CBS domain 292 335 8.0E-4 T 14-10-2018 IPR000644 CBS domain PACID_04360 b2871df294f8db90c172edab484e9259 347 Gene3D G3DSA:3.10.580.10 199 342 1.1E-29 T 14-10-2018 PACID_04360 b2871df294f8db90c172edab484e9259 347 Pfam PF01595 Domain of unknown function DUF21 8 199 3.1E-38 T 14-10-2018 IPR002550 CNNM, transmembrane domain PACID_04220 edc771f9ff99c779e5282e3de0b62d41 236 SMART SM00479 7 192 3.9E-10 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PACID_04220 edc771f9ff99c779e5282e3de0b62d41 236 SUPERFAMILY SSF53098 3 206 7.17E-42 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_04220 edc771f9ff99c779e5282e3de0b62d41 236 Gene3D G3DSA:3.30.420.10 3 199 3.6E-33 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_04220 edc771f9ff99c779e5282e3de0b62d41 236 Pfam PF00929 Exonuclease 10 182 1.2E-10 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PACID_05690 8d56a1f4e663ea9c9cabb6cda6f93ec4 476 Gene3D G3DSA:3.40.710.10 137 472 6.5E-130 T 14-10-2018 PACID_05690 8d56a1f4e663ea9c9cabb6cda6f93ec4 476 Pfam PF00905 Penicillin binding protein transpeptidase domain 155 473 1.7E-67 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PACID_05690 8d56a1f4e663ea9c9cabb6cda6f93ec4 476 Gene3D G3DSA:3.90.1310.10 52 377 6.5E-130 T 14-10-2018 PACID_05690 8d56a1f4e663ea9c9cabb6cda6f93ec4 476 SUPERFAMILY SSF56601 138 475 3.59E-86 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_22540 716ed7a16e309f83619d981f6c2111e6 417 SUPERFAMILY SSF53850 46 409 1.19E-57 T 14-10-2018 PACID_22540 716ed7a16e309f83619d981f6c2111e6 417 Pfam PF13416 Bacterial extracellular solute-binding protein 62 361 1.8E-38 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_22540 716ed7a16e309f83619d981f6c2111e6 417 Gene3D G3DSA:3.40.190.10 153 407 1.7E-82 T 14-10-2018 PACID_22540 716ed7a16e309f83619d981f6c2111e6 417 Gene3D G3DSA:3.40.190.10 58 374 1.7E-82 T 14-10-2018 PACID_20900 44a7bdbacbafa288488e05818d425728 206 Pfam PF02632 BioY family 47 191 6.0E-31 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 PACID_20900 44a7bdbacbafa288488e05818d425728 206 Gene3D G3DSA:1.10.1760.20 11 196 4.6E-42 T 14-10-2018 PACID_20900 44a7bdbacbafa288488e05818d425728 206 PIRSF PIRSF016661 7 200 1.0E-41 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 PACID_01820 6570bb5bbc28f9f722dd0a19320c45aa 120 Pfam PF01381 Helix-turn-helix 19 71 7.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_01820 6570bb5bbc28f9f722dd0a19320c45aa 120 SMART SM00530 18 73 6.1E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_01820 6570bb5bbc28f9f722dd0a19320c45aa 120 SUPERFAMILY SSF47413 13 75 1.27E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_01820 6570bb5bbc28f9f722dd0a19320c45aa 120 Gene3D G3DSA:1.10.260.40 10 87 2.4E-14 T 14-10-2018 PACID_28310 7fa9bc983a1f04ead6c0bce164db9a3b 544 Pfam PF02720 Domain of unknown function (DUF222) 51 412 1.5E-20 T 14-10-2018 IPR003870 Domain of unknown function DUF222 PACID_28310 7fa9bc983a1f04ead6c0bce164db9a3b 544 Pfam PF01844 HNH endonuclease 425 452 7.7E-5 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PACID_28310 7fa9bc983a1f04ead6c0bce164db9a3b 544 SMART SM00507 403 455 4.0E-9 T 14-10-2018 IPR003615 HNH nuclease PACID_28580 cc29531de9c54f594eae5b592c08f28c 324 Gene3D G3DSA:3.40.710.10 83 314 1.3E-9 T 14-10-2018 PACID_28580 cc29531de9c54f594eae5b592c08f28c 324 SUPERFAMILY SSF56601 126 225 6.73E-8 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 Gene3D G3DSA:1.10.10.60 4 58 8.0E-19 T 14-10-2018 PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 32 63 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 Gene3D G3DSA:1.10.357.10 59 192 5.9E-23 T 14-10-2018 PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 Pfam PF16859 Bacterial transcriptional repressor C-terminal 77 186 3.7E-19 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 SUPERFAMILY SSF46689 10 72 8.72E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 66 1.2E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 20 33 7.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 41 64 7.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_13700 4a34d772dac192b880d070ab0fa7ef44 194 SUPERFAMILY SSF48498 80 189 8.9E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_15380 0c597fa6768f7ba4cca547a4ecdaff62 402 Gene3D G3DSA:2.60.120.260 80 211 1.5E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily PACID_18630 94853ff4b677d590a80547e3c8e6a0e0 199 Pfam PF01810 LysE type translocator 16 198 3.2E-46 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PACID_12950 ed8f048c702a5c14e091b599ce577f26 315 Gene3D G3DSA:3.10.290.10 3 65 3.9E-10 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 PACID_12950 ed8f048c702a5c14e091b599ce577f26 315 SUPERFAMILY SSF55174 13 111 1.57E-7 T 14-10-2018 PACID_12950 ed8f048c702a5c14e091b599ce577f26 315 Pfam PF00849 RNA pseudouridylate synthase 88 242 4.8E-30 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_12950 ed8f048c702a5c14e091b599ce577f26 315 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 301 3.4E-85 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_12950 ed8f048c702a5c14e091b599ce577f26 315 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_12950 ed8f048c702a5c14e091b599ce577f26 315 Pfam PF01479 S4 domain 14 58 3.9E-5 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 PACID_12950 ed8f048c702a5c14e091b599ce577f26 315 SUPERFAMILY SSF55120 76 303 2.24E-69 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_12950 ed8f048c702a5c14e091b599ce577f26 315 Gene3D G3DSA:3.30.2350.10 81 305 6.3E-68 T 14-10-2018 PACID_09510 83a58a5c12177bf9e75b50707fc52c76 203 SUPERFAMILY SSF52317 3 186 6.88E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_09510 83a58a5c12177bf9e75b50707fc52c76 203 Pfam PF01965 DJ-1/PfpI family 3 168 1.3E-22 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 PACID_09510 83a58a5c12177bf9e75b50707fc52c76 203 Gene3D G3DSA:3.40.50.880 1 201 4.2E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_07860 eb23d31079613bcb815650386e77f687 329 Gene3D G3DSA:3.40.50.2000 138 275 2.9E-14 T 14-10-2018 PACID_07860 eb23d31079613bcb815650386e77f687 329 Gene3D G3DSA:3.40.50.2000 30 137 2.9E-14 T 14-10-2018 PACID_07860 eb23d31079613bcb815650386e77f687 329 SUPERFAMILY SSF53756 28 322 6.28E-20 T 14-10-2018 PACID_27530 8d7e1e3cfe12d9a6657a319bee4998fc 461 SUPERFAMILY SSF103473 7 442 9.55E-27 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_27530 8d7e1e3cfe12d9a6657a319bee4998fc 461 Gene3D G3DSA:1.20.1250.20 3 438 2.4E-22 T 14-10-2018 PACID_27530 8d7e1e3cfe12d9a6657a319bee4998fc 461 Pfam PF07690 Major Facilitator Superfamily 9 380 1.2E-20 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_22630 1fe4b0e0b6f0a2fc8e218495e12f34ba 246 Gene3D G3DSA:3.40.50.300 3 240 1.2E-57 T 14-10-2018 PACID_22630 1fe4b0e0b6f0a2fc8e218495e12f34ba 246 SMART SM00382 31 207 2.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_22630 1fe4b0e0b6f0a2fc8e218495e12f34ba 246 SUPERFAMILY SSF52540 7 221 1.9E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_22630 1fe4b0e0b6f0a2fc8e218495e12f34ba 246 Pfam PF00005 ABC transporter 22 159 4.5E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_21780 0a97b2235821664424399dc7c138fae1 122 SUPERFAMILY SSF141530 4 119 1.83E-33 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 PACID_21780 0a97b2235821664424399dc7c138fae1 122 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 7 102 3.0E-34 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 PACID_21780 0a97b2235821664424399dc7c138fae1 122 Gene3D G3DSA:2.40.33.40 1 122 5.2E-29 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 PACID_21780 0a97b2235821664424399dc7c138fae1 122 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 117 3.6E-36 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 PACID_24980 34a9f105ea8480d73510b7b31bf87669 275 Pfam PF01875 Memo-like protein 12 267 6.6E-48 T 14-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 PACID_24980 34a9f105ea8480d73510b7b31bf87669 275 Gene3D G3DSA:3.40.830.10 9 271 3.8E-58 T 14-10-2018 PACID_24980 34a9f105ea8480d73510b7b31bf87669 275 TIGRFAM TIGR04336 AmmeMemoSam_B: AmmeMemoRadiSam system protein B 11 268 3.3E-74 T 14-10-2018 PACID_24980 34a9f105ea8480d73510b7b31bf87669 275 Hamap MF_00055 MEMO1 family protein . 9 270 46.538 T 14-10-2018 IPR002737 MEMO1 family Reactome: R-HSA-6785631 PACID_24830 b8302f4c157f9c4dbe3e66c077828737 396 Pfam PF04024 PspC domain 21 74 1.5E-14 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal PACID_12310 47d0d552dc13c47c657f1f985342535c 348 Pfam PF02885 Glycosyl transferase family, helical bundle domain 11 70 1.1E-15 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_12310 47d0d552dc13c47c657f1f985342535c 348 Pfam PF00591 Glycosyl transferase family, a/b domain 80 335 6.7E-79 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_12310 47d0d552dc13c47c657f1f985342535c 348 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 14 344 6.3E-102 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 PACID_12310 47d0d552dc13c47c657f1f985342535c 348 SUPERFAMILY SSF47648 9 75 1.7E-17 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_12310 47d0d552dc13c47c657f1f985342535c 348 SUPERFAMILY SSF52418 81 347 1.96E-79 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_12310 47d0d552dc13c47c657f1f985342535c 348 Gene3D G3DSA:3.40.1030.10 79 348 3.8E-95 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 PACID_12310 47d0d552dc13c47c657f1f985342535c 348 Gene3D G3DSA:1.20.970.10 6 72 3.4E-25 T 14-10-2018 PACID_12310 47d0d552dc13c47c657f1f985342535c 348 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 11 345 34.348 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 PACID_14060 c945644950ee8bd13e2e8f4d08478323 269 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 90 103 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site PACID_14060 c945644950ee8bd13e2e8f4d08478323 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 3.1E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_14060 c945644950ee8bd13e2e8f4d08478323 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 90 106 3.1E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_14060 c945644950ee8bd13e2e8f4d08478323 269 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 3.1E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_14060 c945644950ee8bd13e2e8f4d08478323 269 Gene3D G3DSA:3.40.190.80 162 262 1.1E-11 T 14-10-2018 PACID_14060 c945644950ee8bd13e2e8f4d08478323 269 Pfam PF00459 Inositol monophosphatase family 17 250 4.8E-33 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_14060 c945644950ee8bd13e2e8f4d08478323 269 SUPERFAMILY SSF56655 5 261 1.27E-46 T 14-10-2018 PACID_14060 c945644950ee8bd13e2e8f4d08478323 269 Gene3D G3DSA:3.30.540.10 2 151 2.7E-29 T 14-10-2018 PACID_22590 afd672bdd7e031824a1930602245bd16 454 Pfam PF00872 Transposase, Mutator family 44 415 1.4E-132 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_32790 3cd76950a0f6436d8149616259fb5f66 397 Pfam PF00149 Calcineurin-like phosphoesterase 3 107 8.2E-11 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 PACID_32790 3cd76950a0f6436d8149616259fb5f66 397 Gene3D G3DSA:3.60.21.10 1 252 2.6E-28 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PACID_32790 3cd76950a0f6436d8149616259fb5f66 397 SUPERFAMILY SSF56300 1 315 2.24E-35 T 14-10-2018 PACID_32790 3cd76950a0f6436d8149616259fb5f66 397 PIRSF PIRSF033093 1 378 5.6E-128 T 14-10-2018 IPR014577 Uncharacterised conserved protein UCP033093, metallophosphoesterase-type PACID_12900 f88c8cdb71eadfc07ea2134075cad362 181 Hamap MF_01197 Cell division protein SepF [sepF]. 2 172 20.465 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 PACID_12900 f88c8cdb71eadfc07ea2134075cad362 181 Gene3D G3DSA:3.30.110.150 90 171 2.2E-27 T 14-10-2018 IPR038594 SepF-like superfamily PACID_12900 f88c8cdb71eadfc07ea2134075cad362 181 Pfam PF04472 Cell division protein SepF 93 164 6.9E-25 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 PACID_29770 b8b6863c1b30eb81e3d7ca77ed2b641f 75 Pfam PF06150 ChaB 9 75 5.1E-27 T 14-10-2018 IPR009317 ChaB PACID_29770 b8b6863c1b30eb81e3d7ca77ed2b641f 75 Gene3D G3DSA:1.10.1740.70 2 75 1.7E-33 T 14-10-2018 PACID_29770 b8b6863c1b30eb81e3d7ca77ed2b641f 75 SUPERFAMILY SSF140376 2 74 1.44E-27 T 14-10-2018 IPR037205 ChaB superfamily PACID_02920 694d28dce0fd2b4d491d728d3a3dd83a 425 Gene3D G3DSA:3.90.1720.10 302 424 8.0E-24 T 14-10-2018 PACID_02920 694d28dce0fd2b4d491d728d3a3dd83a 425 SUPERFAMILY SSF54001 301 408 6.57E-14 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PACID_02920 694d28dce0fd2b4d491d728d3a3dd83a 425 Pfam PF05257 CHAP domain 306 396 2.5E-11 T 14-10-2018 IPR007921 CHAP domain PACID_02920 694d28dce0fd2b4d491d728d3a3dd83a 425 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 256 283 5.4E-5 T 14-10-2018 IPR009148 Streptococcal non-M secreted SibA PACID_02920 694d28dce0fd2b4d491d728d3a3dd83a 425 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 346 370 5.4E-5 T 14-10-2018 IPR009148 Streptococcal non-M secreted SibA PACID_06090 6c68954e5ebc9ddf8890bfa0bc2ced7e 208 Gene3D G3DSA:1.10.10.10 1 84 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_06090 6c68954e5ebc9ddf8890bfa0bc2ced7e 208 SUPERFAMILY SSF46785 3 161 1.08E-28 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_06090 6c68954e5ebc9ddf8890bfa0bc2ced7e 208 Pfam PF10400 Virulence activator alpha C-term 90 163 1.4E-7 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal PACID_06090 6c68954e5ebc9ddf8890bfa0bc2ced7e 208 Pfam PF03551 Transcriptional regulator PadR-like family 7 76 3.5E-16 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal PACID_00620 07da9d5fc89e5d761dfa789c607edba4 293 Pfam PF01882 Protein of unknown function DUF58 36 121 5.2E-16 T 14-10-2018 IPR002881 Domain of unknown function DUF58 PACID_29400 b8fd7faaed6403f9340bba8d2b318231 520 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 269 460 6.4E-36 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_29400 b8fd7faaed6403f9340bba8d2b318231 520 Gene3D G3DSA:3.30.420.40 4 256 1.5E-66 T 14-10-2018 PACID_29400 b8fd7faaed6403f9340bba8d2b318231 520 SUPERFAMILY SSF53067 7 258 2.47E-59 T 14-10-2018 PACID_29400 b8fd7faaed6403f9340bba8d2b318231 520 PIRSF PIRSF000538 5 513 5.1E-109 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_29400 b8fd7faaed6403f9340bba8d2b318231 520 SUPERFAMILY SSF53067 257 507 1.42E-58 T 14-10-2018 PACID_29400 b8fd7faaed6403f9340bba8d2b318231 520 Gene3D G3DSA:3.30.420.40 257 516 2.5E-69 T 14-10-2018 PACID_29400 b8fd7faaed6403f9340bba8d2b318231 520 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 255 2.2E-42 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_33920 fff8b3ee9f9467b7ef30047dd1f5d2c5 2257 Pfam PF13087 AAA domain 1615 1820 1.1E-17 T 14-10-2018 PACID_33920 fff8b3ee9f9467b7ef30047dd1f5d2c5 2257 Pfam PF13086 AAA domain 926 1010 3.1E-6 T 14-10-2018 PACID_33920 fff8b3ee9f9467b7ef30047dd1f5d2c5 2257 SUPERFAMILY SSF52540 921 1849 8.54E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_33920 fff8b3ee9f9467b7ef30047dd1f5d2c5 2257 Gene3D G3DSA:3.40.50.300 1416 1614 1.6E-13 T 14-10-2018 PACID_33920 fff8b3ee9f9467b7ef30047dd1f5d2c5 2257 Gene3D G3DSA:3.40.50.300 878 1070 2.0E-16 T 14-10-2018 PACID_33920 fff8b3ee9f9467b7ef30047dd1f5d2c5 2257 Pfam PF13195 Protein of unknown function (DUF4011) 655 815 5.1E-29 T 14-10-2018 IPR025103 Protein of unknown function DUF4011 PACID_33920 fff8b3ee9f9467b7ef30047dd1f5d2c5 2257 Gene3D G3DSA:3.40.50.300 1634 1848 3.6E-27 T 14-10-2018 PACID_04880 c77957ec3a1a29af322e10d601116e83 357 Gene3D G3DSA:3.40.50.2000 188 324 6.1E-36 T 14-10-2018 PACID_04880 c77957ec3a1a29af322e10d601116e83 357 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 2 350 1.9E-79 T 14-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 PACID_04880 c77957ec3a1a29af322e10d601116e83 357 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 26 349 1.0E-96 T 14-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PACID_04880 c77957ec3a1a29af322e10d601116e83 357 SUPERFAMILY SSF53756 2 349 5.53E-94 T 14-10-2018 PACID_04880 c77957ec3a1a29af322e10d601116e83 357 Gene3D G3DSA:3.40.50.2000 1 186 2.3E-68 T 14-10-2018 PACID_07810 d26ff26ba26e33019745a3840d305b1c 324 Gene3D G3DSA:3.90.550.10 23 235 1.5E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_07810 d26ff26ba26e33019745a3840d305b1c 324 SUPERFAMILY SSF53448 24 240 5.63E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_07810 d26ff26ba26e33019745a3840d305b1c 324 Pfam PF13641 Glycosyltransferase like family 2 24 244 1.7E-11 T 14-10-2018 PACID_17120 6d8da6cfe40f752d6ce0fefcda0b236f 119 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 83 113 9.4E-11 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 PACID_17120 6d8da6cfe40f752d6ce0fefcda0b236f 119 SUPERFAMILY SSF57716 85 115 9.98E-7 T 14-10-2018 PACID_17120 6d8da6cfe40f752d6ce0fefcda0b236f 119 Gene3D G3DSA:1.20.120.910 2 119 1.1E-21 T 14-10-2018 PACID_02580 1aae88cc8ad8006dcc75f564182aaec8 135 Pfam PF12728 Helix-turn-helix domain 6 51 3.2E-9 T 14-10-2018 PACID_02580 1aae88cc8ad8006dcc75f564182aaec8 135 SUPERFAMILY SSF46955 5 54 1.34E-8 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PACID_02580 1aae88cc8ad8006dcc75f564182aaec8 135 Gene3D G3DSA:2.40.50.100 67 129 9.4E-15 T 14-10-2018 PACID_02580 1aae88cc8ad8006dcc75f564182aaec8 135 Pfam PF03459 TOBE domain 68 128 6.2E-8 T 14-10-2018 IPR005116 Transport-associated OB, type 1 PACID_02580 1aae88cc8ad8006dcc75f564182aaec8 135 Gene3D G3DSA:1.10.1660.10 2 52 8.0E-8 T 14-10-2018 PACID_02580 1aae88cc8ad8006dcc75f564182aaec8 135 SUPERFAMILY SSF50331 68 131 1.09E-13 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PACID_32090 f22d82fcea10f8a76f5b4ca68375f8f1 314 Gene3D G3DSA:3.40.50.720 122 294 1.9E-69 T 14-10-2018 PACID_32090 f22d82fcea10f8a76f5b4ca68375f8f1 314 SUPERFAMILY SSF51735 2 309 1.97E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_32090 f22d82fcea10f8a76f5b4ca68375f8f1 314 PIRSF PIRSF001439 1 313 1.8E-56 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PACID_32090 f22d82fcea10f8a76f5b4ca68375f8f1 314 Gene3D G3DSA:3.30.1780.10 7 309 1.9E-69 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 PACID_32090 f22d82fcea10f8a76f5b4ca68375f8f1 314 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 43 305 8.6E-37 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 PACID_02550 b49623ccb7054aaa65ca285664a4b2b3 339 Gene3D G3DSA:1.10.3720.10 113 325 4.1E-13 T 14-10-2018 IPR035906 MetI-like superfamily PACID_02550 b49623ccb7054aaa65ca285664a4b2b3 339 SUPERFAMILY SSF161098 119 315 1.78E-12 T 14-10-2018 IPR035906 MetI-like superfamily PACID_02550 b49623ccb7054aaa65ca285664a4b2b3 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 332 6.6E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_28240 c275e670f87e5aae40a1886291b7ed7c 341 SMART SM00382 34 215 1.7E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_28240 c275e670f87e5aae40a1886291b7ed7c 341 Gene3D G3DSA:3.40.50.300 6 258 2.2E-67 T 14-10-2018 PACID_28240 c275e670f87e5aae40a1886291b7ed7c 341 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_28240 c275e670f87e5aae40a1886291b7ed7c 341 Pfam PF00005 ABC transporter 26 165 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_28240 c275e670f87e5aae40a1886291b7ed7c 341 SUPERFAMILY SSF52540 8 242 1.7E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25580 ee8b5acfabc884333034ccfc52fefd5c 122 ProSitePatterns PS01108 Ribosomal protein L24 signature. 9 26 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25580 ee8b5acfabc884333034ccfc52fefd5c 122 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 4 117 19.808 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25580 ee8b5acfabc884333034ccfc52fefd5c 122 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 41 118 2.3E-13 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25580 ee8b5acfabc884333034ccfc52fefd5c 122 Pfam PF00467 KOW motif 8 38 6.5E-8 T 14-10-2018 IPR005824 KOW PACID_25580 ee8b5acfabc884333034ccfc52fefd5c 122 SUPERFAMILY SSF50104 2 99 2.93E-25 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily PACID_25580 ee8b5acfabc884333034ccfc52fefd5c 122 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 4 97 4.1E-25 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25580 ee8b5acfabc884333034ccfc52fefd5c 122 SMART SM00739 5 32 5.9E-7 T 14-10-2018 IPR005824 KOW PACID_25580 ee8b5acfabc884333034ccfc52fefd5c 122 Gene3D G3DSA:2.30.30.30 1 120 2.1E-28 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 PACID_00780 e2f169ec203eb1e15a88c369e2743f44 116 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 11 106 6.8E-24 T 14-10-2018 IPR009241 Toxin HigB-like PACID_21660 c43532470ee9671140b29b78e3e0fd34 230 Pfam PF11209 Protein of unknown function (DUF2993) 16 217 2.5E-19 T 14-10-2018 IPR021373 Protein of unknown function DUF2993 PACID_00940 81cf0f934e2181eb6c4300985ec72f90 143 SUPERFAMILY SSF52980 10 132 4.08E-39 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_00940 81cf0f934e2181eb6c4300985ec72f90 143 Gene3D G3DSA:3.40.960.10 24 140 1.7E-38 T 14-10-2018 PACID_00940 81cf0f934e2181eb6c4300985ec72f90 143 Pfam PF03852 DNA mismatch endonuclease Vsr 13 77 1.5E-18 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 PACID_00940 81cf0f934e2181eb6c4300985ec72f90 143 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 12 124 4.9E-42 T 14-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 PACID_10010 47f912f423bee2f618e0808caf8189a3 167 Pfam PF04977 Septum formation initiator 39 116 1.1E-17 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC PACID_33410 b0555608d6bdca36ae4344b81501ff1d 89 Pfam PF01842 ACT domain 7 67 1.4E-10 T 14-10-2018 IPR002912 ACT domain PACID_33410 b0555608d6bdca36ae4344b81501ff1d 89 SUPERFAMILY SSF55021 2 83 2.19E-16 T 14-10-2018 PACID_33410 b0555608d6bdca36ae4344b81501ff1d 89 Hamap MF_01054 UPF0237 protein . 1 89 22.959 T 14-10-2018 IPR022986 Uncharacterised protein family UPF0237, ACT-type PACID_33410 b0555608d6bdca36ae4344b81501ff1d 89 Gene3D G3DSA:3.30.70.260 1 89 1.2E-22 T 14-10-2018 PACID_22410 31d36336b4e608578f1b1fc1a4bbd1cc 292 Pfam PF04228 Putative neutral zinc metallopeptidase 16 285 1.2E-64 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PACID_31900 5bc437719485e006fc53058b78b72dcb 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 275 7.9E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_31900 5bc437719485e006fc53058b78b72dcb 291 SUPERFAMILY SSF161098 23 291 3.83E-66 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31900 5bc437719485e006fc53058b78b72dcb 291 Gene3D G3DSA:1.10.3720.10 17 281 1.0E-61 T 14-10-2018 IPR035906 MetI-like superfamily PACID_18620 7d7328fe929bcba82a6a4036924a718d 202 PIRSF PIRSF005639 1 193 1.6E-59 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_18620 7d7328fe929bcba82a6a4036924a718d 202 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 3 187 1.2E-54 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_18620 7d7328fe929bcba82a6a4036924a718d 202 Pfam PF01174 SNO glutamine amidotransferase family 6 188 4.8E-47 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_18620 7d7328fe929bcba82a6a4036924a718d 202 Gene3D G3DSA:3.40.50.880 1 194 2.8E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_18620 7d7328fe929bcba82a6a4036924a718d 202 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 189 34.149 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_18620 7d7328fe929bcba82a6a4036924a718d 202 SUPERFAMILY SSF52317 3 188 1.14E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_18620 7d7328fe929bcba82a6a4036924a718d 202 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 PACID_21170 3d9b5e7633ce55e288d2429d2f3a1994 632 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 23 546 1.4E-117 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 PACID_21170 3d9b5e7633ce55e288d2429d2f3a1994 632 SUPERFAMILY SSF48208 60 372 1.82E-19 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_16660 fdef94ca3a2407831429c2c833aabf39 362 Pfam PF03631 Virulence factor BrkB 29 290 3.5E-36 T 14-10-2018 IPR017039 Virulence factor BrkB PACID_12230 aef4e9993b9d20038428100b0c0837c8 131 PIRSF PIRSF017385 1 131 3.4E-48 T 14-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PACID_12230 aef4e9993b9d20038428100b0c0837c8 131 Pfam PF12270 Cytochrome c oxidase subunit IV 1 129 3.4E-46 T 14-10-2018 IPR021050 Cytochrome c oxidase subunit IV, actinobacteria GO:0004129|GO:0016021|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 PACID_22900 5a800550a344c8d6427e66f3e9ef9b3d 404 SUPERFAMILY SSF53098 131 374 2.2E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_22900 5a800550a344c8d6427e66f3e9ef9b3d 404 Pfam PF13006 Insertion element 4 transposase N-terminal 19 116 1.0E-32 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal PACID_22900 5a800550a344c8d6427e66f3e9ef9b3d 404 Pfam PF01609 Transposase DDE domain 134 362 3.6E-18 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PACID_32630 5a800550a344c8d6427e66f3e9ef9b3d 404 SUPERFAMILY SSF53098 131 374 2.2E-25 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_32630 5a800550a344c8d6427e66f3e9ef9b3d 404 Pfam PF13006 Insertion element 4 transposase N-terminal 19 116 1.0E-32 T 14-10-2018 IPR024473 Transposase, IS4, N-terminal PACID_32630 5a800550a344c8d6427e66f3e9ef9b3d 404 Pfam PF01609 Transposase DDE domain 134 362 3.6E-18 T 14-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 PACID_14400 3c5de5b8604ac3810773d1fc3db5f6d2 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 107 3.6E-24 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PACID_14400 3c5de5b8604ac3810773d1fc3db5f6d2 220 SUPERFAMILY SSF161098 10 213 5.49E-41 T 14-10-2018 IPR035906 MetI-like superfamily PACID_14400 3c5de5b8604ac3810773d1fc3db5f6d2 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 213 6.1E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_14400 3c5de5b8604ac3810773d1fc3db5f6d2 220 Gene3D G3DSA:1.10.3720.10 1 214 1.4E-46 T 14-10-2018 IPR035906 MetI-like superfamily PACID_14970 38f030dc9498309c918fdf5bc7115280 337 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 121 194 2.5E-23 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PACID_14970 38f030dc9498309c918fdf5bc7115280 337 Gene3D G3DSA:3.40.47.10 7 183 1.0E-62 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_14970 38f030dc9498309c918fdf5bc7115280 337 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 18 334 4.1E-102 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PACID_14970 38f030dc9498309c918fdf5bc7115280 337 Gene3D G3DSA:3.40.47.10 184 337 7.6E-41 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_14970 38f030dc9498309c918fdf5bc7115280 337 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 246 334 8.0E-30 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 PACID_14970 38f030dc9498309c918fdf5bc7115280 337 SUPERFAMILY SSF53901 15 335 2.89E-63 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 PACID_33080 ed5fcf033bb78ce6aaed941ec62788e2 134 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 24 129 2.7E-25 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PACID_33080 ed5fcf033bb78ce6aaed941ec62788e2 134 Pfam PF13806 Rieske-like [2Fe-2S] domain 24 129 2.2E-30 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 PACID_33080 ed5fcf033bb78ce6aaed941ec62788e2 134 Gene3D G3DSA:2.102.10.10 17 132 7.9E-33 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PACID_33080 ed5fcf033bb78ce6aaed941ec62788e2 134 SUPERFAMILY SSF50022 23 131 8.77E-31 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PACID_09240 3c9f488beed4f2751cb2c2ef2f2b6acf 374 Gene3D G3DSA:3.90.1150.10 267 371 7.7E-36 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_09240 3c9f488beed4f2751cb2c2ef2f2b6acf 374 TIGRFAM TIGR01366 serC_3: putative phosphoserine aminotransferase 12 370 6.3E-150 T 14-10-2018 IPR006272 Phosphoserine aminotransferase, Mycobacterial-type GO:0004648|GO:0006564|GO:0009058 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52 PACID_09240 3c9f488beed4f2751cb2c2ef2f2b6acf 374 SUPERFAMILY SSF53383 16 371 1.11E-68 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_09240 3c9f488beed4f2751cb2c2ef2f2b6acf 374 PIRSF PIRSF000525 4 371 2.1E-79 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 PACID_09240 3c9f488beed4f2751cb2c2ef2f2b6acf 374 Pfam PF00266 Aminotransferase class-V 142 330 5.1E-9 T 14-10-2018 IPR000192 Aminotransferase class V domain PACID_09240 3c9f488beed4f2751cb2c2ef2f2b6acf 374 Gene3D G3DSA:3.40.640.10 35 265 1.6E-49 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_02380 cbb078d84d86e652baa593fc015b3a46 79 Pfam PF00403 Heavy-metal-associated domain 13 72 6.6E-12 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 PACID_02380 cbb078d84d86e652baa593fc015b3a46 79 Gene3D G3DSA:3.30.70.100 3 76 3.2E-17 T 14-10-2018 PACID_02380 cbb078d84d86e652baa593fc015b3a46 79 SUPERFAMILY SSF55008 9 75 2.88E-18 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 PACID_23180 3edcabde2481831fa0da83f951975259 290 Gene3D G3DSA:3.10.129.10 159 289 3.2E-26 T 14-10-2018 PACID_23180 3edcabde2481831fa0da83f951975259 290 SUPERFAMILY SSF54637 9 137 9.72E-23 T 14-10-2018 IPR029069 HotDog domain superfamily PACID_23180 3edcabde2481831fa0da83f951975259 290 Gene3D G3DSA:3.10.129.10 14 142 2.3E-26 T 14-10-2018 PACID_23180 3edcabde2481831fa0da83f951975259 290 Pfam PF13279 Thioesterase-like superfamily 164 276 6.4E-9 T 14-10-2018 PACID_23180 3edcabde2481831fa0da83f951975259 290 SUPERFAMILY SSF54637 160 287 8.93E-24 T 14-10-2018 IPR029069 HotDog domain superfamily PACID_23180 3edcabde2481831fa0da83f951975259 290 Pfam PF03061 Thioesterase superfamily 27 102 2.0E-8 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 SUPERFAMILY SSF48264 42 392 3.93E-52 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 Gene3D G3DSA:1.10.630.10 3 398 4.5E-61 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 PRINTS PR00359 B-class P450 signature 78 89 1.3E-15 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 PRINTS PR00359 B-class P450 signature 313 328 1.3E-15 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 PRINTS PR00359 B-class P450 signature 285 312 1.3E-15 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 PRINTS PR00359 B-class P450 signature 343 354 1.3E-15 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 PRINTS PR00359 B-class P450 signature 268 279 1.3E-15 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 PRINTS PR00359 B-class P450 signature 334 343 1.3E-15 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 PACID_02660 685bce5a3e22c3a5f1d791d8f7ae5d69 398 Pfam PF00067 Cytochrome P450 268 376 3.7E-13 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 PACID_08580 71d6e3badba4d3213b648d65ac81b573 206 Gene3D G3DSA:1.10.150.240 11 82 5.0E-35 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 PACID_08580 71d6e3badba4d3213b648d65ac81b573 206 Pfam PF13419 Haloacid dehalogenase-like hydrolase 1 182 3.7E-21 T 14-10-2018 PACID_08580 71d6e3badba4d3213b648d65ac81b573 206 Gene3D G3DSA:3.40.50.1000 1 190 5.0E-35 T 14-10-2018 IPR023214 HAD superfamily PACID_08580 71d6e3badba4d3213b648d65ac81b573 206 SUPERFAMILY SSF56784 1 197 1.63E-38 T 14-10-2018 IPR036412 HAD-like superfamily PACID_08580 71d6e3badba4d3213b648d65ac81b573 206 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 130 182 1.2E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 PACID_27800 9fd85448fb106430ae535fdd11d60df0 363 SUPERFAMILY SSF81345 36 356 3.92E-75 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_27800 9fd85448fb106430ae535fdd11d60df0 363 Pfam PF01032 FecCD transport family 48 356 8.1E-87 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 PACID_27800 9fd85448fb106430ae535fdd11d60df0 363 Gene3D G3DSA:1.10.3470.10 36 361 2.6E-89 T 14-10-2018 IPR037294 ABC transporter, BtuC-like PACID_20410 99bcc8ba14099a1f8874be07a6c6eacd 175 Pfam PF05656 Protein of unknown function (DUF805) 61 161 3.9E-27 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 PACID_33860 8e5c90cc420c7113799e8dc507453ef0 121 SUPERFAMILY SSF46785 8 115 5.4E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_33860 8e5c90cc420c7113799e8dc507453ef0 121 Gene3D G3DSA:1.10.10.10 4 121 6.2E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_33860 8e5c90cc420c7113799e8dc507453ef0 121 Pfam PF01638 HxlR-like helix-turn-helix 23 110 4.4E-25 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type PACID_13870 a6a461991dca4dc813a253dc04ed9707 214 SUPERFAMILY SSF109854 29 204 5.49E-13 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes PACID_13870 a6a461991dca4dc813a253dc04ed9707 214 Pfam PF12867 DinB superfamily 36 197 5.1E-17 T 14-10-2018 IPR024775 DinB-like domain PACID_14640 476d24bcaba32ea198391f988da68196 133 Pfam PF05713 Bacterial mobilisation protein (MobC) 80 123 5.5E-12 T 14-10-2018 IPR008687 Bacterial mobilisation PACID_08630 8f8bba8f2c1057e137979d846acdd598 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 312 4.4E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_08630 8f8bba8f2c1057e137979d846acdd598 319 SUPERFAMILY SSF161098 77 307 4.06E-52 T 14-10-2018 IPR035906 MetI-like superfamily PACID_08630 8f8bba8f2c1057e137979d846acdd598 319 Gene3D G3DSA:1.10.3720.10 73 317 1.0E-60 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32990 9bcb1c0b5283112e810acac3055e0e88 143 SUPERFAMILY SSF141523 14 142 3.01E-15 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PACID_32990 9bcb1c0b5283112e810acac3055e0e88 143 Gene3D G3DSA:2.40.440.10 6 143 1.1E-14 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like PACID_32990 9bcb1c0b5283112e810acac3055e0e88 143 Pfam PF03734 L,D-transpeptidase catalytic domain 16 142 9.3E-14 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 PACID_25070 20184903beb29d5bd6ef82bb7d9a9f26 385 Gene3D G3DSA:3.40.50.2000 5 178 5.6E-60 T 14-10-2018 PACID_25070 20184903beb29d5bd6ef82bb7d9a9f26 385 Pfam PF00534 Glycosyl transferases group 1 196 344 4.1E-20 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_25070 20184903beb29d5bd6ef82bb7d9a9f26 385 SUPERFAMILY SSF53756 3 367 5.42E-70 T 14-10-2018 PACID_25070 20184903beb29d5bd6ef82bb7d9a9f26 385 Pfam PF13439 Glycosyltransferase Family 4 14 182 2.7E-24 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_25070 20184903beb29d5bd6ef82bb7d9a9f26 385 Gene3D G3DSA:3.40.50.2000 179 352 5.6E-60 T 14-10-2018 PACID_25380 2a06adeb15d91068fb1101d1160396a2 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 6.0E-9 T 14-10-2018 PACID_25380 2a06adeb15d91068fb1101d1160396a2 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.8E-23 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25380 2a06adeb15d91068fb1101d1160396a2 37 SUPERFAMILY SSF57840 1 37 9.55E-18 T 14-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25380 2a06adeb15d91068fb1101d1160396a2 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 18.342 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25380 2a06adeb15d91068fb1101d1160396a2 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25380 2a06adeb15d91068fb1101d1160396a2 37 Pfam PF00444 Ribosomal protein L36 1 37 3.1E-20 T 14-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_03650 dda8412c09513b76b0411669e98df4ae 431 SUPERFAMILY SSF56112 39 383 1.02E-36 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_03650 dda8412c09513b76b0411669e98df4ae 431 Pfam PF01636 Phosphotransferase enzyme family 194 353 1.4E-13 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PACID_03650 dda8412c09513b76b0411669e98df4ae 431 Gene3D G3DSA:3.90.1200.10 198 386 1.9E-14 T 14-10-2018 PACID_17900 9aaa5222b93dc2d36ecab82d78c4a79a 218 SUPERFAMILY SSF48498 91 212 4.22E-19 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_17900 9aaa5222b93dc2d36ecab82d78c4a79a 218 SUPERFAMILY SSF46689 12 74 7.18E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_17900 9aaa5222b93dc2d36ecab82d78c4a79a 218 Gene3D G3DSA:1.10.10.60 10 72 1.1E-20 T 14-10-2018 PACID_17900 9aaa5222b93dc2d36ecab82d78c4a79a 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_17900 9aaa5222b93dc2d36ecab82d78c4a79a 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.5E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_17900 9aaa5222b93dc2d36ecab82d78c4a79a 218 Gene3D G3DSA:1.10.357.10 73 211 9.0E-22 T 14-10-2018 PACID_17900 9aaa5222b93dc2d36ecab82d78c4a79a 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 4.8E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_31250 dd1723b761b2b680ff2ad6e747c33f87 433 Gene3D G3DSA:3.90.1150.10 6 409 1.4E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_31250 dd1723b761b2b680ff2ad6e747c33f87 433 SUPERFAMILY SSF53383 13 414 2.45E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_31250 dd1723b761b2b680ff2ad6e747c33f87 433 Pfam PF00202 Aminotransferase class-III 14 412 1.3E-112 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_31250 dd1723b761b2b680ff2ad6e747c33f87 433 PIRSF PIRSF000521 4 118 2.4E-10 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_31250 dd1723b761b2b680ff2ad6e747c33f87 433 PIRSF PIRSF000521 109 416 6.9E-40 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 PACID_31250 dd1723b761b2b680ff2ad6e747c33f87 433 Gene3D G3DSA:3.40.640.10 48 312 1.4E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_04050 81af9eb67a477520b81003a69ffb9718 443 Pfam PF01610 Transposase 171 426 9.6E-64 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PACID_04050 81af9eb67a477520b81003a69ffb9718 443 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 52 95 4.5E-7 T 14-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PACID_26160 5157bcbe851aa07e66fc05ee7db0134b 380 Gene3D G3DSA:3.40.50.970 59 232 8.1E-26 T 14-10-2018 PACID_26160 5157bcbe851aa07e66fc05ee7db0134b 380 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 81 228 4.1E-32 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 PACID_26160 5157bcbe851aa07e66fc05ee7db0134b 380 SUPERFAMILY SSF52518 45 370 6.63E-80 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold PACID_19380 8c2e354534181297faa89ddd81c3e9a5 270 Hamap MF_01416 ATP synthase subunit delta [atpD]. 48 270 10.779 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19380 8c2e354534181297faa89ddd81c3e9a5 270 Pfam PF00213 ATP synthase delta (OSCP) subunit 112 269 9.8E-24 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19380 8c2e354534181297faa89ddd81c3e9a5 270 PRINTS PR00125 ATP synthase delta subunit signature 229 244 1.9E-6 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_19380 8c2e354534181297faa89ddd81c3e9a5 270 PRINTS PR00125 ATP synthase delta subunit signature 244 262 1.9E-6 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 PACID_29860 e11e03189f55d242bfd5c8d8f686dd3f 904 SUPERFAMILY SSF52540 287 664 1.01E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_29860 e11e03189f55d242bfd5c8d8f686dd3f 904 Gene3D G3DSA:1.10.3210.30 5 262 1.1E-51 T 14-10-2018 IPR038257 CRISPR-associated Cas3-type HD domain superfamily PACID_29860 e11e03189f55d242bfd5c8d8f686dd3f 904 SMART SM00490 572 662 0.0057 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_29860 e11e03189f55d242bfd5c8d8f686dd3f 904 TIGRFAM TIGR01596 cas3_HD: CRISPR-associated endonuclease Cas3-HD 27 215 6.8E-23 T 14-10-2018 IPR006483 CRISPR-associated Cas3-type HD domain PACID_29860 e11e03189f55d242bfd5c8d8f686dd3f 904 SMART SM00487 264 508 1.5E-6 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain PACID_29860 e11e03189f55d242bfd5c8d8f686dd3f 904 TIGRFAM TIGR01587 cas3_core: CRISPR-associated helicase Cas3 287 666 4.4E-51 T 14-10-2018 IPR006474 Helicase Cas3, CRISPR-associated, core PACID_29860 e11e03189f55d242bfd5c8d8f686dd3f 904 Pfam PF00271 Helicase conserved C-terminal domain 556 661 1.3E-5 T 14-10-2018 IPR001650 Helicase, C-terminal PACID_29860 e11e03189f55d242bfd5c8d8f686dd3f 904 Gene3D G3DSA:3.40.50.300 539 669 5.6E-10 T 14-10-2018 PACID_17130 6f9ac3cda80fcea60de30df681d55f23 313 SUPERFAMILY SSF48179 174 295 6.46E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 PACID_17130 6f9ac3cda80fcea60de30df681d55f23 313 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 10 296 1.1E-62 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 PACID_17130 6f9ac3cda80fcea60de30df681d55f23 313 Gene3D G3DSA:1.10.1040.10 174 300 8.0E-39 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 PACID_17130 6f9ac3cda80fcea60de30df681d55f23 313 Gene3D G3DSA:3.40.50.720 1 173 8.4E-46 T 14-10-2018 PACID_17130 6f9ac3cda80fcea60de30df681d55f23 313 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 174 296 5.8E-31 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain PACID_17130 6f9ac3cda80fcea60de30df681d55f23 313 Pfam PF02558 Ketopantoate reductase PanE/ApbA 10 149 1.2E-22 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain PACID_17130 6f9ac3cda80fcea60de30df681d55f23 313 SUPERFAMILY SSF51735 7 111 7.38E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30340 a5d6e26aa8be7378a2c38e426f498b1f 145 Pfam PF14552 Tautomerase enzyme 38 118 2.8E-25 T 14-10-2018 IPR037479 Tautomerase, MSAD family PACID_30340 a5d6e26aa8be7378a2c38e426f498b1f 145 SUPERFAMILY SSF55331 2 128 9.85E-31 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily PACID_30340 a5d6e26aa8be7378a2c38e426f498b1f 145 Gene3D G3DSA:3.30.429.10 2 136 2.3E-46 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily PACID_13000 ef2c8cd95851aaf13a0344852031b481 252 SUPERFAMILY SSF53790 2 250 1.83E-29 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PACID_13000 ef2c8cd95851aaf13a0344852031b481 252 Gene3D G3DSA:3.40.1010.10 2 144 6.1E-35 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PACID_13000 ef2c8cd95851aaf13a0344852031b481 252 PIRSF PIRSF036525 2 252 1.1E-85 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 PACID_13000 ef2c8cd95851aaf13a0344852031b481 252 TIGRFAM TIGR02434 CobF: precorrin-6A synthase (deacetylating) 4 251 3.4E-97 T 14-10-2018 IPR012797 Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase GO:0009236|GO:0043819 KEGG: 00860+2.1.1.152|MetaCyc: PWY-7376 PACID_13000 ef2c8cd95851aaf13a0344852031b481 252 Gene3D G3DSA:3.30.950.10 145 252 8.1E-40 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PACID_13000 ef2c8cd95851aaf13a0344852031b481 252 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 223 3.2E-25 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PACID_09670 85c36820e135c01a5a32456555e61e4c 218 Pfam PF13646 HEAT repeats 74 146 3.0E-7 T 14-10-2018 PACID_09670 85c36820e135c01a5a32456555e61e4c 218 SUPERFAMILY SSF48371 7 169 7.97E-16 T 14-10-2018 IPR016024 Armadillo-type fold PACID_09670 85c36820e135c01a5a32456555e61e4c 218 Gene3D G3DSA:1.25.10.10 2 198 1.1E-15 T 14-10-2018 IPR011989 Armadillo-like helical PACID_05900 4d6300eb816a91daafd232ce6b4c4ce3 196 Pfam PF03551 Transcriptional regulator PadR-like family 61 129 8.5E-23 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal PACID_05900 4d6300eb816a91daafd232ce6b4c4ce3 196 SUPERFAMILY SSF46785 45 129 2.93E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_05900 4d6300eb816a91daafd232ce6b4c4ce3 196 Gene3D G3DSA:1.10.10.10 50 145 3.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_02650 32abe8f73ecb93ee16a899a2dd4d8dac 209 Gene3D G3DSA:2.30.110.10 5 200 9.8E-38 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PACID_02650 32abe8f73ecb93ee16a899a2dd4d8dac 209 Pfam PF01613 Flavin reductase like domain 15 142 2.0E-12 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PACID_02650 32abe8f73ecb93ee16a899a2dd4d8dac 209 SUPERFAMILY SSF50475 6 192 1.06E-29 T 14-10-2018 PACID_30470 a45da2a2672404924ff18565fa02c1e5 502 Gene3D G3DSA:1.20.1530.20 7 387 2.3E-21 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily PACID_30470 a45da2a2672404924ff18565fa02c1e5 502 Gene3D G3DSA:3.30.70.1450 404 482 4.0E-13 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PACID_30470 a45da2a2672404924ff18565fa02c1e5 502 Pfam PF02080 TrkA-C domain 415 481 8.9E-10 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 PACID_30470 a45da2a2672404924ff18565fa02c1e5 502 Pfam PF00999 Sodium/hydrogen exchanger family 14 384 1.6E-50 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PACID_30470 a45da2a2672404924ff18565fa02c1e5 502 SUPERFAMILY SSF116726 409 481 6.93E-11 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 PACID_32000 880b955abbf6fefcfd8a04b1e78ae367 293 SUPERFAMILY SSF161098 24 293 1.13E-55 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32000 880b955abbf6fefcfd8a04b1e78ae367 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 286 6.6E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_32000 880b955abbf6fefcfd8a04b1e78ae367 293 Gene3D G3DSA:1.10.3720.10 20 280 1.3E-48 T 14-10-2018 IPR035906 MetI-like superfamily PACID_06870 a1cb10d8e25d6c76543be8b1edc0dfe0 252 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_06870 a1cb10d8e25d6c76543be8b1edc0dfe0 252 Gene3D G3DSA:3.40.50.300 1 239 6.8E-63 T 14-10-2018 PACID_06870 a1cb10d8e25d6c76543be8b1edc0dfe0 252 SUPERFAMILY SSF52540 5 221 3.03E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_06870 a1cb10d8e25d6c76543be8b1edc0dfe0 252 SMART SM00382 31 206 2.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_06870 a1cb10d8e25d6c76543be8b1edc0dfe0 252 Pfam PF00005 ABC transporter 22 159 1.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 SMART SM00421 465 522 4.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 SUPERFAMILY SSF46894 463 527 2.86E-17 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 468 482 3.0E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 498 510 3.0E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 482 498 3.0E-7 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 Pfam PF00196 Bacterial regulatory proteins, luxR family 467 519 1.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 Gene3D G3DSA:1.10.10.10 464 528 1.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 Gene3D G3DSA:1.25.40.10 96 418 7.0E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_05310 738a920b989cbf8ed92419e0771c0f27 528 SUPERFAMILY SSF48452 164 423 8.26E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_12990 f6bc94c1e0eff131fb5dcf4c57ddc954 138 SUPERFAMILY SSF54637 10 132 6.91E-25 T 14-10-2018 IPR029069 HotDog domain superfamily PACID_12990 f6bc94c1e0eff131fb5dcf4c57ddc954 138 Pfam PF03061 Thioesterase superfamily 44 121 5.4E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 PACID_12990 f6bc94c1e0eff131fb5dcf4c57ddc954 138 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 17 128 1.3E-24 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 PACID_12990 f6bc94c1e0eff131fb5dcf4c57ddc954 138 Gene3D G3DSA:3.10.129.10 5 133 7.5E-36 T 14-10-2018 PACID_12170 c8b4053ba0685d9b961ae45313d2ff1e 262 Pfam PF04012 PspA/IM30 family 3 231 1.1E-32 T 14-10-2018 IPR007157 PspA/IM30 PACID_06900 30238823989354388646260fbea179a8 708 Gene3D G3DSA:2.70.98.60 90 273 5.7E-27 T 14-10-2018 IPR038417 Alpha-galactosidase, N-terminal domain superfamily KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 SUPERFAMILY SSF51445 287 609 2.67E-93 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_06900 30238823989354388646260fbea179a8 708 Gene3D G3DSA:3.20.20.70 276 589 3.5E-119 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_06900 30238823989354388646260fbea179a8 708 ProSitePatterns PS00512 Alpha-galactosidase signature. 321 337 - T 14-10-2018 IPR000111 Glycoside hydrolase family 27/36, conserved site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 Pfam PF16875 Glycosyl hydrolase family 36 N-terminal domain 21 250 1.7E-33 T 14-10-2018 IPR031704 Glycosyl hydrolase family 36, N-terminal KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 PIRSF PIRSF005536 96 654 3.3E-162 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 Pfam PF02065 Melibiase 255 592 1.3E-113 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 292 306 1.2E-40 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 477 493 1.2E-40 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 428 443 1.2E-40 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 207 222 1.2E-40 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 502 518 1.2E-40 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 370 392 1.2E-40 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_06900 30238823989354388646260fbea179a8 708 PRINTS PR00743 Glycosyl hydrolase family 36 signature 320 335 1.2E-40 T 14-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 SUPERFAMILY SSF53383 485 981 4.93E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 Pfam PF02347 Glycine cleavage system P-protein 484 745 1.1E-13 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 Pfam PF02347 Glycine cleavage system P-protein 16 442 8.4E-154 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 16 979 0.0 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 Gene3D G3DSA:3.40.640.10 95 359 2.5E-100 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 Gene3D G3DSA:3.40.640.10 526 753 2.4E-59 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 7 985 23.789 T 14-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 SUPERFAMILY SSF53383 16 442 9.98E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_12690 1480c35d7c7380841eb86e786515a5c5 988 Gene3D G3DSA:3.90.1150.10 776 904 2.7E-37 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 PACID_13300 2b57ad487305b42af209848af5e33727 901 SUPERFAMILY SSF50249 487 570 1.47E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold PACID_13300 2b57ad487305b42af209848af5e33727 901 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 463 870 2.3E-142 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 PACID_13300 2b57ad487305b42af209848af5e33727 901 Pfam PF10150 Ribonuclease E/G family 566 840 2.0E-97 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 PACID_13300 2b57ad487305b42af209848af5e33727 901 Gene3D G3DSA:2.40.50.140 479 570 7.9E-29 T 14-10-2018 PACID_13300 2b57ad487305b42af209848af5e33727 901 SMART SM00316 485 564 1.2E-7 T 14-10-2018 IPR022967 RNA-binding domain, S1 PACID_07940 a4a36e6df446c59121a8fc417d0eb77c 249 Pfam PF00588 SpoU rRNA Methylase family 104 240 5.4E-25 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 PACID_07940 a4a36e6df446c59121a8fc417d0eb77c 249 Gene3D G3DSA:3.40.1280.10 86 249 1.9E-32 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal PACID_07940 a4a36e6df446c59121a8fc417d0eb77c 249 SUPERFAMILY SSF75217 88 247 3.6E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases PACID_15390 e1cf8e75ea30f39409eed8ca24328c62 1467 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 60 387 3.3E-60 T 14-10-2018 IPR010090 Phage tail tape measure protein PACID_15390 e1cf8e75ea30f39409eed8ca24328c62 1467 Pfam PF10145 Phage-related minor tail protein 99 298 5.3E-48 T 14-10-2018 IPR010090 Phage tail tape measure protein PACID_15390 e1cf8e75ea30f39409eed8ca24328c62 1467 SUPERFAMILY SSF53955 1250 1350 4.22E-7 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily PACID_14210 35bc992c428767b5c7cd69ad4a0df7b6 306 SUPERFAMILY SSF52540 14 230 6.91E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_14210 35bc992c428767b5c7cd69ad4a0df7b6 306 Pfam PF00005 ABC transporter 30 169 4.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_14210 35bc992c428767b5c7cd69ad4a0df7b6 306 SMART SM00382 38 217 6.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_14210 35bc992c428767b5c7cd69ad4a0df7b6 306 Pfam PF13732 Domain of unknown function (DUF4162) 234 303 9.1E-8 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 PACID_14210 35bc992c428767b5c7cd69ad4a0df7b6 306 Gene3D G3DSA:3.40.50.300 3 231 8.4E-59 T 14-10-2018 PACID_08870 c5cdeb64bc243631a558e9b9db910920 242 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 1 216 26.698 T 14-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 PACID_08870 c5cdeb64bc243631a558e9b9db910920 242 Gene3D G3DSA:1.10.1760.20 1 209 2.3E-47 T 14-10-2018 PACID_08870 c5cdeb64bc243631a558e9b9db910920 242 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 1 208 2.2E-78 T 14-10-2018 IPR018024 Cobalamin (vitamin B12) transport protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 PACID_08870 c5cdeb64bc243631a558e9b9db910920 242 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 2 208 3.6E-46 T 14-10-2018 IPR002751 Metal transport protein CbiM/NikMN GO:0000041|GO:0016021 PACID_12720 a8dbb7139256eb1e86da433da473d11f 136 Pfam PF11239 Protein of unknown function (DUF3040) 1 86 1.9E-22 T 14-10-2018 IPR021401 Protein of unknown function DUF3040 PACID_03010 2dddfcbfc8dc108314cc59935a91ea97 467 Gene3D G3DSA:3.20.20.140 20 453 1.5E-124 T 14-10-2018 PACID_03010 2dddfcbfc8dc108314cc59935a91ea97 467 SUPERFAMILY SSF51556 15 466 2.15E-129 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_03010 2dddfcbfc8dc108314cc59935a91ea97 467 Pfam PF02614 Glucuronate isomerase 20 464 1.1E-73 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 PACID_03010 2dddfcbfc8dc108314cc59935a91ea97 467 Gene3D G3DSA:1.10.2020.10 49 147 1.5E-124 T 14-10-2018 PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 Pfam PF00459 Inositol monophosphatase family 14 242 8.9E-38 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 Gene3D G3DSA:3.40.190.80 147 259 4.0E-21 T 14-10-2018 PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.5E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 2.5E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 2.5E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 2.5E-15 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 Gene3D G3DSA:3.30.540.10 2 138 1.5E-34 T 14-10-2018 PACID_19880 d4fa1a3da22e4ffe212e1024244ac762 261 SUPERFAMILY SSF56655 4 258 5.63E-66 T 14-10-2018 PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 Gene3D G3DSA:3.40.50.2020 289 453 7.9E-145 T 14-10-2018 PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 Pfam PF00156 Phosphoribosyl transferase domain 287 400 4.2E-7 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 Gene3D G3DSA:3.60.20.10 23 472 7.9E-145 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 23 471 4.3E-153 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 Pfam PF13537 Glutamine amidotransferase domain 104 228 1.1E-14 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 SUPERFAMILY SSF53271 265 477 8.65E-68 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 PIRSF PIRSF000485 19 485 2.8E-161 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 22 470 44.943 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 PACID_27130 f1e1ef5600f915262c57d73ae99e07ea 505 SUPERFAMILY SSF56235 23 281 5.75E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_30840 454e968716670d08132ea54b6e69f879 569 Pfam PF00474 Sodium:solute symporter family 42 459 1.4E-49 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PACID_30840 454e968716670d08132ea54b6e69f879 569 Gene3D G3DSA:1.20.1730.10 31 539 4.4E-110 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily PACID_30840 454e968716670d08132ea54b6e69f879 569 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 42 467 9.4E-72 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 PACID_31310 f6d606fc563567c265e6bb9bdb533df9 476 Gene3D G3DSA:3.90.1300.10 4 467 4.4E-133 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_31310 f6d606fc563567c265e6bb9bdb533df9 476 Pfam PF01425 Amidase 34 450 1.3E-95 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_31310 f6d606fc563567c265e6bb9bdb533df9 476 SUPERFAMILY SSF75304 4 461 6.28E-123 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 PACID_25120 5f8c8c85fea05b937ca16eb289f0a436 327 Gene3D G3DSA:3.40.50.300 10 327 3.6E-85 T 14-10-2018 PACID_25120 5f8c8c85fea05b937ca16eb289f0a436 327 Hamap MF_00215 Pantothenate kinase [coaA]. 1 327 155.093 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PACID_25120 5f8c8c85fea05b937ca16eb289f0a436 327 SUPERFAMILY SSF52540 15 326 1.37E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25120 5f8c8c85fea05b937ca16eb289f0a436 327 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 100 253 1.2E-12 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 PACID_25120 5f8c8c85fea05b937ca16eb289f0a436 327 PIRSF PIRSF000545 9 327 2.4E-128 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PACID_25120 5f8c8c85fea05b937ca16eb289f0a436 327 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 18 326 5.7E-116 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 PACID_01660 a94af85ecdff07ca656244db920093c7 102 SUPERFAMILY SSF52833 14 98 2.33E-8 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_01660 a94af85ecdff07ca656244db920093c7 102 Gene3D G3DSA:3.40.30.10 14 97 1.1E-6 T 14-10-2018 PACID_30200 5c1493955e9cba1d924686fbbcac913f 455 SUPERFAMILY SSF53850 24 445 3.94E-53 T 14-10-2018 PACID_30200 5c1493955e9cba1d924686fbbcac913f 455 Pfam PF13416 Bacterial extracellular solute-binding protein 66 378 4.3E-28 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_30200 5c1493955e9cba1d924686fbbcac913f 455 Gene3D G3DSA:3.40.190.10 41 452 1.8E-57 T 14-10-2018 PACID_03540 ebb4cd7f0455fcb90b3bfb7c7357909b 242 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_03540 ebb4cd7f0455fcb90b3bfb7c7357909b 242 Gene3D G3DSA:3.40.50.300 17 241 9.5E-65 T 14-10-2018 PACID_03540 ebb4cd7f0455fcb90b3bfb7c7357909b 242 SUPERFAMILY SSF52540 19 237 1.35E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03540 ebb4cd7f0455fcb90b3bfb7c7357909b 242 SMART SM00382 47 234 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_03540 ebb4cd7f0455fcb90b3bfb7c7357909b 242 Pfam PF00005 ABC transporter 38 186 7.1E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_01000 4016fc5d56646c1b3848498fb7c1bc82 259 Gene3D G3DSA:3.40.50.1000 3 251 5.6E-35 T 14-10-2018 IPR023214 HAD superfamily PACID_01000 4016fc5d56646c1b3848498fb7c1bc82 259 SUPERFAMILY SSF56784 1 250 1.69E-36 T 14-10-2018 IPR036412 HAD-like superfamily PACID_01000 4016fc5d56646c1b3848498fb7c1bc82 259 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 251 2.7E-24 T 14-10-2018 PACID_01000 4016fc5d56646c1b3848498fb7c1bc82 259 Gene3D G3DSA:3.30.1240.10 83 188 5.6E-35 T 14-10-2018 PACID_27570 a429b7e84675c1d1e71d58585404a4eb 214 Gene3D G3DSA:3.40.50.2300 5 114 2.3E-28 T 14-10-2018 PACID_27570 a429b7e84675c1d1e71d58585404a4eb 214 SUPERFAMILY SSF46894 112 211 6.52E-31 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_27570 a429b7e84675c1d1e71d58585404a4eb 214 SMART SM00862 136 210 3.2E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_27570 a429b7e84675c1d1e71d58585404a4eb 214 Pfam PF00486 Transcriptional regulatory protein, C terminal 136 210 3.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_27570 a429b7e84675c1d1e71d58585404a4eb 214 Gene3D G3DSA:1.10.10.10 115 214 5.0E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_27570 a429b7e84675c1d1e71d58585404a4eb 214 SUPERFAMILY SSF52172 16 109 4.97E-5 T 14-10-2018 IPR011006 CheY-like superfamily PACID_09270 f1ee5d2e80e7ad4e2ebcb311542d7ebe 280 SUPERFAMILY SSF53335 45 166 3.04E-24 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_09270 f1ee5d2e80e7ad4e2ebcb311542d7ebe 280 Gene3D G3DSA:3.40.50.150 45 191 8.3E-25 T 14-10-2018 PACID_09270 f1ee5d2e80e7ad4e2ebcb311542d7ebe 280 Pfam PF08241 Methyltransferase domain 67 158 8.9E-16 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PACID_11320 178055f815671f4dafebd27bd3561532 119 SUPERFAMILY SSF46785 15 106 1.64E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_11320 178055f815671f4dafebd27bd3561532 119 Gene3D G3DSA:1.10.10.10 3 114 1.7E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_11320 178055f815671f4dafebd27bd3561532 119 Pfam PF03551 Transcriptional regulator PadR-like family 16 88 4.9E-22 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 SUPERFAMILY SSF88713 272 532 7.12E-71 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 Gene3D G3DSA:2.70.98.30 735 872 1.9E-5 T 14-10-2018 PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 SMART SM00872 534 612 4.7E-32 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 680 1031 6.7E-41 T 14-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 272 519 5.8E-78 T 14-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 SUPERFAMILY SSF88688 533 634 1.57E-24 T 14-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 Pfam PF09261 Alpha mannosidase middle domain 534 609 3.3E-24 T 14-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 SUPERFAMILY SSF74650 648 1031 1.54E-47 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 Gene3D G3DSA:1.20.1270.50 537 633 1.6E-22 T 14-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 PACID_31150 29977161bfedd2993a70e54812d3f7bd 1034 Gene3D G3DSA:3.20.110.10 264 534 1.3E-51 T 14-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily PACID_07460 7a2c7fea5077701df01db30ac891081c 286 Gene3D G3DSA:3.40.50.300 28 230 8.6E-23 T 14-10-2018 PACID_07460 7a2c7fea5077701df01db30ac891081c 286 SUPERFAMILY SSF52540 31 226 2.33E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07460 7a2c7fea5077701df01db30ac891081c 286 Pfam PF00005 ABC transporter 49 191 5.6E-13 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_07460 7a2c7fea5077701df01db30ac891081c 286 SMART SM00382 56 249 4.7E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_25510 6ca9edc6f144d9b62dfb0dce8bc3896d 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 17.771 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25510 6ca9edc6f144d9b62dfb0dce8bc3896d 60 Gene3D G3DSA:3.30.1390.20 1 60 3.6E-22 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PACID_25510 6ca9edc6f144d9b62dfb0dce8bc3896d 60 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 7.3E-15 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain PACID_25510 6ca9edc6f144d9b62dfb0dce8bc3896d 60 SUPERFAMILY SSF55129 1 60 1.96E-18 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily PACID_25510 6ca9edc6f144d9b62dfb0dce8bc3896d 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.2E-21 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25510 6ca9edc6f144d9b62dfb0dce8bc3896d 60 PIRSF PIRSF002211 1 60 4.0E-23 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_13720 c1d146e8b25b3339539695c610e88d2e 167 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 14 111 1.6E-21 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain PACID_13720 c1d146e8b25b3339539695c610e88d2e 167 SUPERFAMILY SSF53927 12 163 7.86E-43 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 PACID_13720 c1d146e8b25b3339539695c610e88d2e 167 Gene3D G3DSA:3.40.140.10 13 167 5.2E-52 T 14-10-2018 PACID_07180 cbfbad9b243bfda9128ddd32b3760896 817 Pfam PF02687 FtsX-like permease family 716 810 4.6E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_07180 cbfbad9b243bfda9128ddd32b3760896 817 Pfam PF02687 FtsX-like permease family 273 365 4.0E-9 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_07180 cbfbad9b243bfda9128ddd32b3760896 817 Pfam PF12704 MacB-like periplasmic core domain 11 205 3.2E-12 T 14-10-2018 IPR025857 MacB-like periplasmic core domain PACID_00190 3c038d7809bbd91a40944d49be34b3eb 127 Pfam PF05025 RbsD / FucU transport protein family 1 125 2.6E-35 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 PACID_00190 3c038d7809bbd91a40944d49be34b3eb 127 Gene3D G3DSA:3.40.1650.10 8 123 1.2E-26 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 PACID_00190 3c038d7809bbd91a40944d49be34b3eb 127 SUPERFAMILY SSF102546 1 127 1.22E-31 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 PACID_03510 590ce283ee3b552e04933fc4fd5c062b 204 SUPERFAMILY SSF51261 70 171 2.09E-13 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_03510 590ce283ee3b552e04933fc4fd5c062b 204 Gene3D G3DSA:2.70.70.10 14 189 6.9E-19 T 14-10-2018 IPR011055 Duplicated hybrid motif PACID_03510 590ce283ee3b552e04933fc4fd5c062b 204 Pfam PF01551 Peptidase family M23 71 175 6.6E-11 T 14-10-2018 IPR016047 Peptidase M23 PACID_19260 81cd03ef424983fa31f6458cd5285edc 153 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 128 6.5E-19 T 14-10-2018 PACID_19260 81cd03ef424983fa31f6458cd5285edc 153 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 11 143 3.8E-37 T 14-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 PACID_19260 81cd03ef424983fa31f6458cd5285edc 153 SUPERFAMILY SSF54593 5 145 9.76E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_19260 81cd03ef424983fa31f6458cd5285edc 153 Gene3D G3DSA:3.10.180.10 4 145 2.2E-33 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_06700 bf71eaadccb3964c04dda1a8bd0335c2 441 Gene3D G3DSA:3.10.105.10 172 416 6.1E-72 T 14-10-2018 PACID_06700 bf71eaadccb3964c04dda1a8bd0335c2 441 Gene3D G3DSA:3.90.76.10 6 93 6.1E-72 T 14-10-2018 PACID_06700 bf71eaadccb3964c04dda1a8bd0335c2 441 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 6 353 8.4E-53 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PACID_06700 bf71eaadccb3964c04dda1a8bd0335c2 441 PIRSF PIRSF002741 5 435 1.5E-46 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PACID_06700 bf71eaadccb3964c04dda1a8bd0335c2 441 SUPERFAMILY SSF53850 7 437 6.21E-76 T 14-10-2018 PACID_06700 bf71eaadccb3964c04dda1a8bd0335c2 441 Gene3D G3DSA:3.40.190.10 94 425 6.1E-72 T 14-10-2018 PACID_29450 f799b9c963524f73b2fe999c2f90ec6b 192 Pfam PF00929 Exonuclease 6 164 9.9E-12 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PACID_29450 f799b9c963524f73b2fe999c2f90ec6b 192 Gene3D G3DSA:3.30.420.10 1 173 3.2E-29 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_29450 f799b9c963524f73b2fe999c2f90ec6b 192 SMART SM00479 3 173 1.9E-15 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III PACID_29450 f799b9c963524f73b2fe999c2f90ec6b 192 SUPERFAMILY SSF53098 1 178 5.61E-34 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_31610 4c827f6070cef1a9cf5d8ab75d24730c 218 SMART SM01007 8 181 8.8E-52 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PACID_31610 4c827f6070cef1a9cf5d8ab75d24730c 218 Gene3D G3DSA:3.40.225.10 1 211 4.0E-62 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PACID_31610 4c827f6070cef1a9cf5d8ab75d24730c 218 SUPERFAMILY SSF53639 2 208 1.35E-59 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily PACID_31610 4c827f6070cef1a9cf5d8ab75d24730c 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 181 2.2E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal PACID_11800 0ae771575b1a4e4a264ad69229edbe48 215 Gene3D G3DSA:3.40.50.150 10 209 2.6E-35 T 14-10-2018 PACID_11800 0ae771575b1a4e4a264ad69229edbe48 215 Pfam PF13649 Methyltransferase domain 42 137 1.2E-7 T 14-10-2018 PACID_11800 0ae771575b1a4e4a264ad69229edbe48 215 SUPERFAMILY SSF53335 10 154 1.82E-23 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_01140 d40da87a057f65c20c7b27894c2b401c 235 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 226 4.1E-40 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 PACID_01140 d40da87a057f65c20c7b27894c2b401c 235 SUPERFAMILY SSF51366 10 223 7.53E-39 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 PACID_01140 d40da87a057f65c20c7b27894c2b401c 235 Gene3D G3DSA:3.20.20.70 2 226 7.9E-66 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_02800 fb54481e1f693e6b6465b53c121e5bb4 166 Pfam PF00994 Probable molybdopterin binding domain 8 156 5.5E-28 T 14-10-2018 IPR001453 MoaB/Mog domain PACID_02800 fb54481e1f693e6b6465b53c121e5bb4 166 Gene3D G3DSA:3.40.980.10 2 163 8.9E-47 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PACID_02800 fb54481e1f693e6b6465b53c121e5bb4 166 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 5 150 5.2E-25 T 14-10-2018 IPR001453 MoaB/Mog domain PACID_02800 fb54481e1f693e6b6465b53c121e5bb4 166 SMART SM00852 7 157 1.2E-18 T 14-10-2018 IPR001453 MoaB/Mog domain PACID_02800 fb54481e1f693e6b6465b53c121e5bb4 166 SUPERFAMILY SSF53218 4 161 1.13E-36 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily PACID_17890 2012e8228e840f4d2ab2d4ef78f67af0 355 Gene3D G3DSA:3.40.50.2000 162 322 2.0E-7 T 14-10-2018 PACID_17890 2012e8228e840f4d2ab2d4ef78f67af0 355 SUPERFAMILY SSF53756 166 316 5.49E-9 T 14-10-2018 PACID_01490 373a0b78ea779b4ea07246c76f189bb9 62 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 2 48 1.4E-5 T 14-10-2018 IPR009241 Toxin HigB-like PACID_01490 373a0b78ea779b4ea07246c76f189bb9 62 PIRSF PIRSF028744 1 58 6.1E-24 T 14-10-2018 IPR014056 Addiction module killer protein, predicted PACID_01490 373a0b78ea779b4ea07246c76f189bb9 62 TIGRFAM TIGR02683 upstrm_HI1419: putative addiction module killer protein 1 53 3.7E-23 T 14-10-2018 IPR014056 Addiction module killer protein, predicted PACID_21970 d198ebc60b6baa95d6a5a1bca14fecc1 277 PIRSF PIRSF021603 1 277 4.1E-99 T 14-10-2018 IPR016794 Uncharacterised conserved protein UCP21603, acetyltransferase-like PACID_21970 d198ebc60b6baa95d6a5a1bca14fecc1 277 Gene3D G3DSA:3.40.630.30 71 276 2.2E-19 T 14-10-2018 PACID_21970 d198ebc60b6baa95d6a5a1bca14fecc1 277 Pfam PF13312 Domain of unknown function (DUF4081) 46 152 4.4E-30 T 14-10-2018 IPR025289 Domain of unknown function DUF4081 PACID_21970 d198ebc60b6baa95d6a5a1bca14fecc1 277 SUPERFAMILY SSF55729 1 272 4.96E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_07030 e3ea010303bfe1e9404dc0653a81a88c 246 Pfam PF06283 Trehalose utilisation 3 216 1.7E-27 T 14-10-2018 IPR029010 ThuA-like domain PACID_07030 e3ea010303bfe1e9404dc0653a81a88c 246 SUPERFAMILY SSF52317 3 221 4.58E-26 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_07030 e3ea010303bfe1e9404dc0653a81a88c 246 Gene3D G3DSA:3.40.50.880 1 244 1.4E-27 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_00340 f38b21bbaa5002e5b93925bd1f61250f 269 SUPERFAMILY SSF52799 13 267 1.13E-47 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like PACID_00340 f38b21bbaa5002e5b93925bd1f61250f 269 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 161 171 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 PACID_00340 f38b21bbaa5002e5b93925bd1f61250f 269 Gene3D G3DSA:3.90.190.10 14 268 3.1E-60 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like PACID_00340 f38b21bbaa5002e5b93925bd1f61250f 269 Pfam PF13350 Tyrosine phosphatase family 14 269 5.3E-61 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type PACID_26650 7316aead1ba62e978ca20ea46707288a 326 Pfam PF00296 Luciferase-like monooxygenase 15 300 1.9E-29 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PACID_26650 7316aead1ba62e978ca20ea46707288a 326 Gene3D G3DSA:3.20.20.30 1 325 7.1E-71 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PACID_26650 7316aead1ba62e978ca20ea46707288a 326 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 322 1.2E-84 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 PACID_26650 7316aead1ba62e978ca20ea46707288a 326 SUPERFAMILY SSF51679 1 324 3.14E-57 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PACID_03970 1af421b077cc8eddcccb66c4f96e5ceb 161 SUPERFAMILY SSF50475 8 134 2.06E-28 T 14-10-2018 PACID_03970 1af421b077cc8eddcccb66c4f96e5ceb 161 Gene3D G3DSA:2.30.110.10 6 160 1.2E-37 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PACID_03970 1af421b077cc8eddcccb66c4f96e5ceb 161 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 10 150 6.8E-38 T 14-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain PACID_02460 c2df05fa3836effd6304a482fb01fb7e 95 SUPERFAMILY SSF55729 5 92 8.44E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_02460 c2df05fa3836effd6304a482fb01fb7e 95 Pfam PF14542 GCN5-related N-acetyl-transferase 14 91 4.8E-27 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase PACID_02460 c2df05fa3836effd6304a482fb01fb7e 95 Gene3D G3DSA:3.40.630.30 5 95 1.7E-28 T 14-10-2018 PACID_33420 ddd208e91c0a06c648b385b28c207d0d 271 SUPERFAMILY SSF143631 126 262 5.23E-12 T 14-10-2018 IPR003374 ApbE-like superfamily PACID_33420 ddd208e91c0a06c648b385b28c207d0d 271 Gene3D G3DSA:3.10.520.20 86 193 5.0E-9 T 14-10-2018 PACID_33420 ddd208e91c0a06c648b385b28c207d0d 271 Pfam PF02424 ApbE family 124 179 1.5E-7 T 14-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 PACID_14180 5da3bcb64f12076f2ba3b3f5f5aae55b 417 Gene3D G3DSA:3.20.20.105 1 406 8.0E-138 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PACID_14180 5da3bcb64f12076f2ba3b3f5f5aae55b 417 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 401 45.343 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PACID_14180 5da3bcb64f12076f2ba3b3f5f5aae55b 417 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 403 9.3E-123 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PACID_14180 5da3bcb64f12076f2ba3b3f5f5aae55b 417 Pfam PF01702 Queuine tRNA-ribosyltransferase 156 398 7.9E-76 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PACID_14180 5da3bcb64f12076f2ba3b3f5f5aae55b 417 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 402 1.5E-117 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PACID_14180 5da3bcb64f12076f2ba3b3f5f5aae55b 417 SUPERFAMILY SSF51713 3 402 6.41E-122 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 PACID_28890 f5747c64fa248f6b3d8ced8f1e593337 98 Pfam PF10006 Uncharacterized conserved protein (DUF2249) 24 96 3.2E-17 T 14-10-2018 IPR018720 Domain of unknown function DUF2249 PACID_07610 9d3f74211dc19c2aa19e6d166c70acab 129 Gene3D G3DSA:3.10.450.50 5 128 3.1E-32 T 14-10-2018 PACID_07610 9d3f74211dc19c2aa19e6d166c70acab 129 SUPERFAMILY SSF54427 27 126 5.13E-30 T 14-10-2018 IPR032710 NTF2-like domain superfamily PACID_12590 77ff63e4292b4ba94e8ba679a2ea02ba 269 SUPERFAMILY SSF52540 29 259 1.38E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_12590 77ff63e4292b4ba94e8ba679a2ea02ba 269 SMART SM00382 54 236 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_12590 77ff63e4292b4ba94e8ba679a2ea02ba 269 Pfam PF00005 ABC transporter 45 185 3.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_12590 77ff63e4292b4ba94e8ba679a2ea02ba 269 Gene3D G3DSA:3.40.50.300 25 261 1.7E-60 T 14-10-2018 PACID_06530 9eb9ee2c0a5ffbd4b8c80e94d56e1f1e 216 Pfam PF08044 Domain of unknown function (DUF1707) 12 63 9.2E-18 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 PACID_06530 9eb9ee2c0a5ffbd4b8c80e94d56e1f1e 216 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 101 174 1.4E-10 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF PACID_23720 90e8659f2ec5c8f6163257ec513de5b6 434 Pfam PF08353 Domain of unknown function (DUF1727) 320 422 2.0E-23 T 14-10-2018 IPR013564 Domain of unknown function DUF1727 PACID_23720 90e8659f2ec5c8f6163257ec513de5b6 434 Gene3D G3DSA:3.40.1190.10 58 301 1.7E-33 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_23720 90e8659f2ec5c8f6163257ec513de5b6 434 Pfam PF08245 Mur ligase middle domain 70 189 2.1E-10 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 PACID_23720 90e8659f2ec5c8f6163257ec513de5b6 434 SUPERFAMILY SSF53623 56 298 2.75E-31 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 PACID_22820 eb91bcb093fd21758104f2e1cc9d58ce 126 SUPERFAMILY SSF56349 4 86 1.44E-11 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PACID_22820 eb91bcb093fd21758104f2e1cc9d58ce 126 Pfam PF00589 Phage integrase family 5 84 5.2E-7 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PACID_22820 eb91bcb093fd21758104f2e1cc9d58ce 126 Gene3D G3DSA:1.10.443.10 2 96 1.2E-13 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PACID_27790 c23c087d536ac682cb02ae36df8dd9b6 362 Gene3D G3DSA:3.40.50.1980 199 361 1.0E-49 T 14-10-2018 PACID_27790 c23c087d536ac682cb02ae36df8dd9b6 362 SUPERFAMILY SSF53807 61 333 5.89E-46 T 14-10-2018 PACID_27790 c23c087d536ac682cb02ae36df8dd9b6 362 Gene3D G3DSA:3.40.50.1980 54 197 7.4E-38 T 14-10-2018 PACID_27790 c23c087d536ac682cb02ae36df8dd9b6 362 Pfam PF01497 Periplasmic binding protein 79 326 2.4E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain PACID_25170 f00e8f7e24aaa226028f5d7f3a1dc441 147 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 141 2.4E-56 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_25170 f00e8f7e24aaa226028f5d7f3a1dc441 147 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 146 27.805 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PACID_25170 f00e8f7e24aaa226028f5d7f3a1dc441 147 SUPERFAMILY SSF52161 4 144 1.96E-56 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_25170 f00e8f7e24aaa226028f5d7f3a1dc441 147 Pfam PF00572 Ribosomal protein L13 14 138 2.9E-53 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PACID_25170 f00e8f7e24aaa226028f5d7f3a1dc441 147 PIRSF PIRSF002181 2 147 3.4E-44 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 PACID_25170 f00e8f7e24aaa226028f5d7f3a1dc441 147 Gene3D G3DSA:3.90.1180.10 1 142 3.0E-58 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 PACID_02770 8775f591597fbb16ee86e45e13616b19 136 Pfam PF02391 MoaE protein 5 115 9.5E-35 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PACID_02770 8775f591597fbb16ee86e45e13616b19 136 Gene3D G3DSA:3.90.1170.40 1 134 1.5E-44 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PACID_02770 8775f591597fbb16ee86e45e13616b19 136 SUPERFAMILY SSF54690 3 133 1.96E-39 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 PACID_17510 8ab3737fb01a6fe8634b38f756b5bfdb 271 SUPERFAMILY SSF56235 41 255 5.5E-54 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_17510 8ab3737fb01a6fe8634b38f756b5bfdb 271 TIGRFAM TIGR03690 20S_bact_beta: proteasome, beta subunit 47 264 1.3E-98 T 14-10-2018 IPR022483 Peptidase T1A, proteasome beta-subunit, actinobacteria GO:0004298|GO:0005839|GO:0010498 PACID_17510 8ab3737fb01a6fe8634b38f756b5bfdb 271 Gene3D G3DSA:3.60.20.10 50 271 5.2E-80 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal PACID_17510 8ab3737fb01a6fe8634b38f756b5bfdb 271 Pfam PF00227 Proteasome subunit 47 225 4.6E-36 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 Pfam PF00248 Aldo/keto reductase family 16 264 5.4E-37 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 PIRSF PIRSF000097 5 277 1.2E-57 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 234 249 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 PRINTS PR00069 Aldo-keto reductase signature 124 141 1.5E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 PRINTS PR00069 Aldo-keto reductase signature 36 60 1.5E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 PRINTS PR00069 Aldo-keto reductase signature 201 225 1.5E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 PRINTS PR00069 Aldo-keto reductase signature 92 110 1.5E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 PRINTS PR00069 Aldo-keto reductase signature 158 187 1.5E-37 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 SUPERFAMILY SSF51430 12 265 1.18E-72 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_31620 ad3ed43c618332b0327b36b34b9050fd 280 Gene3D G3DSA:3.20.20.100 4 276 1.3E-82 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily PACID_30310 a377f45c5fe2ee24ab5694d261e9662d 286 SUPERFAMILY SSF54637 117 280 3.05E-34 T 14-10-2018 IPR029069 HotDog domain superfamily PACID_30310 a377f45c5fe2ee24ab5694d261e9662d 286 SUPERFAMILY SSF54637 5 114 1.34E-37 T 14-10-2018 IPR029069 HotDog domain superfamily PACID_30310 a377f45c5fe2ee24ab5694d261e9662d 286 Pfam PF13622 Thioesterase-like superfamily 32 279 8.1E-53 T 14-10-2018 PACID_30310 a377f45c5fe2ee24ab5694d261e9662d 286 Gene3D G3DSA:3.10.129.90 3 281 6.2E-89 T 14-10-2018 PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 Pfam PF00005 ABC transporter 22 163 3.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 Gene3D G3DSA:3.40.50.300 4 223 1.3E-61 T 14-10-2018 PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 SUPERFAMILY SSF52540 4 244 8.22E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 SUPERFAMILY SSF50331 238 364 6.56E-23 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 Pfam PF08402 TOBE domain 279 356 1.4E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 Gene3D G3DSA:2.40.50.140 285 348 1.6E-24 T 14-10-2018 PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 SMART SM00382 30 213 6.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_08530 3bb864db8b3e1e8a8a598399bd6bbc3c 365 Gene3D G3DSA:2.40.50.940 224 357 1.6E-24 T 14-10-2018 PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 4.6E-9 T 14-10-2018 PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 4.6E-9 T 14-10-2018 PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 20 42 4.6E-9 T 14-10-2018 PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 SUPERFAMILY SSF51905 16 339 2.02E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 Gene3D G3DSA:3.50.50.100 10 404 2.0E-111 T 14-10-2018 PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 20 331 4.9E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 21 40 4.1E-10 T 14-10-2018 PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 4.1E-10 T 14-10-2018 PACID_04960 48df4b92338c68cfb6432b7e032e0003 449 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 114 132 4.1E-10 T 14-10-2018 PACID_26100 44019faa2a1f643844ed592bf8ab6868 318 Pfam PF16113 Enoyl-CoA hydratase/isomerase 196 315 2.0E-26 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 PACID_26100 44019faa2a1f643844ed592bf8ab6868 318 Pfam PF16113 Enoyl-CoA hydratase/isomerase 22 186 7.4E-38 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 PACID_26100 44019faa2a1f643844ed592bf8ab6868 318 SUPERFAMILY SSF52096 15 301 1.09E-41 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily PACID_26100 44019faa2a1f643844ed592bf8ab6868 318 Gene3D G3DSA:3.90.226.40 4 318 1.2E-73 T 14-10-2018 PACID_02440 47f6a201b80ccb261e8851a11b5bf75e 92 Pfam PF01402 Ribbon-helix-helix protein, copG family 9 42 1.5E-4 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_02440 47f6a201b80ccb261e8851a11b5bf75e 92 SUPERFAMILY SSF47598 8 54 9.18E-6 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PACID_02240 697fd862a55eeae4e25a1e3c3dcdacf6 210 SUPERFAMILY SSF109604 28 153 2.32E-11 T 14-10-2018 PACID_05950 0caececc2342724537cffdc3b3cfcce7 227 SUPERFAMILY SSF48498 104 171 6.07E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_05950 0caececc2342724537cffdc3b3cfcce7 227 Gene3D G3DSA:1.10.357.10 3 219 1.5E-58 T 14-10-2018 PACID_05950 0caececc2342724537cffdc3b3cfcce7 227 SUPERFAMILY SSF46689 2 76 1.23E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_05950 0caececc2342724537cffdc3b3cfcce7 227 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 53 8.6E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_05950 0caececc2342724537cffdc3b3cfcce7 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 9.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_05950 0caececc2342724537cffdc3b3cfcce7 227 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 9.8E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_28950 2e88ea0a0678b5bffa920fd34eb52fff 86 Gene3D G3DSA:3.30.2310.20 1 85 1.1E-24 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PACID_28950 2e88ea0a0678b5bffa920fd34eb52fff 86 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 84 5.8E-11 T 14-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family PACID_28950 2e88ea0a0678b5bffa920fd34eb52fff 86 SUPERFAMILY SSF143011 2 83 1.03E-22 T 14-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily PACID_02830 4dac7fe70bd198c3aaf1948205820bb7 217 Pfam PF02581 Thiamine monophosphate synthase 9 196 2.8E-45 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PACID_02830 4dac7fe70bd198c3aaf1948205820bb7 217 Gene3D G3DSA:3.20.20.70 1 212 3.8E-52 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_02830 4dac7fe70bd198c3aaf1948205820bb7 217 SUPERFAMILY SSF51391 5 211 1.96E-44 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PACID_02830 4dac7fe70bd198c3aaf1948205820bb7 217 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 214 22.563 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 PACID_30540 d337d8da2145f0dd0b81e2ad500f1dd1 330 Gene3D G3DSA:3.30.40.60 241 330 1.5E-16 T 14-10-2018 PACID_30540 d337d8da2145f0dd0b81e2ad500f1dd1 330 SMART SM00507 265 321 1.4E-11 T 14-10-2018 IPR003615 HNH nuclease PACID_30540 d337d8da2145f0dd0b81e2ad500f1dd1 330 Pfam PF01844 HNH endonuclease 278 326 1.0E-13 T 14-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 PACID_26120 df585ad3f15401ddd08094423cd777fe 111 SUPERFAMILY SSF54862 9 81 2.76E-16 T 14-10-2018 PACID_26120 df585ad3f15401ddd08094423cd777fe 111 Gene3D G3DSA:3.30.70.3270 2 95 1.0E-20 T 14-10-2018 PACID_26120 df585ad3f15401ddd08094423cd777fe 111 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_26120 df585ad3f15401ddd08094423cd777fe 111 Pfam PF12838 4Fe-4S dicluster domain 12 75 1.7E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_10670 2c8b519c3227615e9812e3d1ee1b5ea3 101 Pfam PF12728 Helix-turn-helix domain 29 58 5.5E-7 T 14-10-2018 PACID_10670 2c8b519c3227615e9812e3d1ee1b5ea3 101 Gene3D G3DSA:1.10.1660.10 16 63 8.5E-9 T 14-10-2018 PACID_04350 37630a56b94868603ed513663a14eddd 178 Pfam PF00583 Acetyltransferase (GNAT) family 53 145 1.7E-12 T 14-10-2018 IPR000182 GNAT domain PACID_04350 37630a56b94868603ed513663a14eddd 178 Gene3D G3DSA:3.40.630.30 5 160 2.2E-26 T 14-10-2018 PACID_04350 37630a56b94868603ed513663a14eddd 178 SUPERFAMILY SSF55729 8 156 2.4E-25 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_32760 456b32a837ffac8a46ea8e2baee6290e 157 Pfam PF12802 MarR family 39 99 4.3E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_32760 456b32a837ffac8a46ea8e2baee6290e 157 SUPERFAMILY SSF46785 4 151 4.03E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_32760 456b32a837ffac8a46ea8e2baee6290e 157 SMART SM00347 33 136 4.0E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_32760 456b32a837ffac8a46ea8e2baee6290e 157 Gene3D G3DSA:1.10.10.10 7 156 8.5E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_23420 81bf3b862b92d43fee5bedac22ac5ddb 289 Pfam PF05368 NmrA-like family 14 239 3.9E-51 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 PACID_23420 81bf3b862b92d43fee5bedac22ac5ddb 289 SUPERFAMILY SSF51735 12 275 8.14E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_23420 81bf3b862b92d43fee5bedac22ac5ddb 289 Gene3D G3DSA:3.40.50.720 13 279 2.9E-77 T 14-10-2018 PACID_23420 81bf3b862b92d43fee5bedac22ac5ddb 289 Gene3D G3DSA:3.90.25.10 155 286 2.9E-77 T 14-10-2018 PACID_05620 147af132bcaa98d309962bee74db3c16 241 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 199 3.1E-8 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 PACID_05620 147af132bcaa98d309962bee74db3c16 241 Gene3D G3DSA:3.40.50.12500 1 240 1.9E-79 T 14-10-2018 PACID_23410 10000064e8a06510ff07e20b6bc3d09e 193 SUPERFAMILY SSF48498 91 183 6.43E-8 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily PACID_23410 10000064e8a06510ff07e20b6bc3d09e 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 36 64 1.3E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_23410 10000064e8a06510ff07e20b6bc3d09e 193 Gene3D G3DSA:1.10.357.10 1 190 2.6E-34 T 14-10-2018 PACID_23410 10000064e8a06510ff07e20b6bc3d09e 193 SUPERFAMILY SSF46689 5 79 3.54E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_33200 191039e14f2a41f5f3abaac1c684efe1 241 Pfam PF02586 SOS response associated peptidase (SRAP) 1 221 4.9E-54 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) PACID_33200 191039e14f2a41f5f3abaac1c684efe1 241 Gene3D G3DSA:3.90.1680.10 1 235 3.3E-55 T 14-10-2018 IPR036590 SOS response associated peptidase-like PACID_33200 191039e14f2a41f5f3abaac1c684efe1 241 SUPERFAMILY SSF143081 2 234 1.22E-52 T 14-10-2018 IPR036590 SOS response associated peptidase-like PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 Pfam PF07690 Major Facilitator Superfamily 38 430 4.3E-51 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 35 514 1.1E-73 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 ProSitePatterns PS00216 Sugar transport proteins signature 1. 87 103 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 1.7E-7 T 14-10-2018 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 PRINTS PR01036 Tetracycline resistance protein TetB signature 127 147 1.7E-7 T 14-10-2018 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 PRINTS PR01036 Tetracycline resistance protein TetB signature 421 440 1.7E-7 T 14-10-2018 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 PRINTS PR01036 Tetracycline resistance protein TetB signature 322 346 1.7E-7 T 14-10-2018 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 Gene3D G3DSA:1.20.1720.10 35 272 8.3E-48 T 14-10-2018 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 Gene3D G3DSA:1.20.1250.20 285 524 6.7E-19 T 14-10-2018 PACID_18680 a5d8cd7c94f21e90b70d3babde9259c7 588 SUPERFAMILY SSF103473 26 530 4.71E-66 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_02990 9d08ac0f68c3e0af016f0d9b77381fbe 511 Gene3D G3DSA:1.20.1250.20 199 405 8.6E-10 T 14-10-2018 PACID_02990 9d08ac0f68c3e0af016f0d9b77381fbe 511 SUPERFAMILY SSF103473 12 448 2.09E-23 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_02990 9d08ac0f68c3e0af016f0d9b77381fbe 511 Pfam PF13347 MFS/sugar transport protein 7 455 1.3E-41 T 14-10-2018 PACID_02990 9d08ac0f68c3e0af016f0d9b77381fbe 511 Gene3D G3DSA:1.20.1250.20 5 197 1.2E-9 T 14-10-2018 PACID_33580 9d282315a1edab322783195e5e9372d2 649 SUPERFAMILY SSF56519 150 314 2.62E-12 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 PACID_33580 9d282315a1edab322783195e5e9372d2 649 Pfam PF03717 Penicillin-binding Protein dimerisation domain 158 311 2.3E-8 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 PACID_33580 9d282315a1edab322783195e5e9372d2 649 Pfam PF00905 Penicillin binding protein transpeptidase domain 378 648 9.4E-40 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 PACID_33580 9d282315a1edab322783195e5e9372d2 649 Gene3D G3DSA:3.40.710.10 350 649 1.9E-58 T 14-10-2018 PACID_33580 9d282315a1edab322783195e5e9372d2 649 Gene3D G3DSA:3.90.1310.30 148 327 7.2E-10 T 14-10-2018 PACID_33580 9d282315a1edab322783195e5e9372d2 649 ProSitePatterns PS00337 Beta-lactamase class-D active site. 411 421 - T 14-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 PACID_33580 9d282315a1edab322783195e5e9372d2 649 SUPERFAMILY SSF56601 286 648 1.36E-56 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_13390 8644905373c9df7e5317ea4085d2f0ae 133 Gene3D G3DSA:3.30.460.10 1 112 6.4E-35 T 14-10-2018 PACID_13390 8644905373c9df7e5317ea4085d2f0ae 133 SUPERFAMILY SSF81301 8 119 5.23E-34 T 14-10-2018 PACID_13390 8644905373c9df7e5317ea4085d2f0ae 133 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 7 109 21.097 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PACID_13390 8644905373c9df7e5317ea4085d2f0ae 133 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 13 108 4.7E-28 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS PACID_13390 8644905373c9df7e5317ea4085d2f0ae 133 Pfam PF02410 Ribosomal silencing factor during starvation 15 108 2.0E-20 T 14-10-2018 PACID_07630 cfa5f6a774e4f3c1618b92fde142a777 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 268 6.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_07630 cfa5f6a774e4f3c1618b92fde142a777 289 SUPERFAMILY SSF161098 91 272 4.32E-35 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07630 cfa5f6a774e4f3c1618b92fde142a777 289 Gene3D G3DSA:1.10.3720.10 88 280 7.7E-30 T 14-10-2018 IPR035906 MetI-like superfamily PACID_20280 36e8897372e6a16f86db6123af911df5 188 SUPERFAMILY SSF143456 7 182 5.23E-44 T 14-10-2018 PACID_20280 36e8897372e6a16f86db6123af911df5 188 Pfam PF02622 Uncharacterized ACR, COG1678 21 171 9.6E-33 T 14-10-2018 IPR003774 Protein of unknown function UPF0301 PACID_20280 36e8897372e6a16f86db6123af911df5 188 Gene3D G3DSA:3.40.1740.10 2 179 1.3E-51 T 14-10-2018 PACID_24660 ae0e7dded2a476b5a8487a99f49d2e33 214 SUPERFAMILY SSF63380 92 194 2.72E-28 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PACID_24660 ae0e7dded2a476b5a8487a99f49d2e33 214 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 196 4.5E-58 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24660 ae0e7dded2a476b5a8487a99f49d2e33 214 Gene3D G3DSA:2.40.30.20 101 205 3.6E-29 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_24660 ae0e7dded2a476b5a8487a99f49d2e33 214 Pfam PF00677 Lumazine binding domain 3 85 3.3E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24660 ae0e7dded2a476b5a8487a99f49d2e33 214 Pfam PF00677 Lumazine binding domain 99 183 3.1E-21 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24660 ae0e7dded2a476b5a8487a99f49d2e33 214 SUPERFAMILY SSF63380 1 87 1.11E-23 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel PACID_24660 ae0e7dded2a476b5a8487a99f49d2e33 214 Gene3D G3DSA:2.40.30.20 1 87 1.1E-26 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 PACID_24660 ae0e7dded2a476b5a8487a99f49d2e33 214 PIRSF PIRSF000498 1 210 1.2E-63 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_01040 6dc1d6e3b4f3a562db3e4e9d2552a287 353 Gene3D G3DSA:3.30.390.50 1 92 1.6E-16 T 14-10-2018 PACID_01040 6dc1d6e3b4f3a562db3e4e9d2552a287 353 Pfam PF03099 Biotin/lipoate A/B protein ligase family 155 267 4.4E-8 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 PACID_01040 6dc1d6e3b4f3a562db3e4e9d2552a287 353 SUPERFAMILY SSF55681 101 350 2.07E-61 T 14-10-2018 PACID_01040 6dc1d6e3b4f3a562db3e4e9d2552a287 353 Gene3D G3DSA:3.30.930.10 105 352 3.6E-50 T 14-10-2018 PACID_17220 4855d2b7059a18085e928026b3478ff3 137 Gene3D G3DSA:3.40.462.20 2 96 1.0E-8 T 14-10-2018 PACID_17220 4855d2b7059a18085e928026b3478ff3 137 Gene3D G3DSA:3.30.465.10 97 121 1.0E-8 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PACID_09600 6aff1dbf8879c0f58fe5e5c2b44cabee 110 SUPERFAMILY SSF46785 11 104 5.15E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_09600 6aff1dbf8879c0f58fe5e5c2b44cabee 110 SMART SM00418 14 92 3.8E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 PACID_09600 6aff1dbf8879c0f58fe5e5c2b44cabee 110 Gene3D G3DSA:1.10.10.10 7 110 2.5E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_09600 6aff1dbf8879c0f58fe5e5c2b44cabee 110 Pfam PF12840 Helix-turn-helix domain 13 72 6.7E-10 T 14-10-2018 PACID_30190 30e1106f2a3991d7a76853cd92bfd9cd 360 Gene3D G3DSA:2.60.120.1390 171 360 3.4E-64 T 14-10-2018 PACID_30190 30e1106f2a3991d7a76853cd92bfd9cd 360 Pfam PF11175 Protein of unknown function (DUF2961) 80 339 1.2E-91 T 14-10-2018 IPR021345 Protein of unknown function DUF2961 PACID_30190 30e1106f2a3991d7a76853cd92bfd9cd 360 Gene3D G3DSA:2.60.120.1390 6 170 6.8E-52 T 14-10-2018 PACID_09620 c1251d6a6966be348df79c6b1a07ad75 545 Gene3D G3DSA:3.50.50.60 9 535 1.2E-139 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_09620 c1251d6a6966be348df79c6b1a07ad75 545 Pfam PF00890 FAD binding domain 10 526 8.3E-74 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_09620 c1251d6a6966be348df79c6b1a07ad75 545 Gene3D G3DSA:3.90.700.10 328 474 1.2E-139 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_09620 c1251d6a6966be348df79c6b1a07ad75 545 SUPERFAMILY SSF56425 320 481 9.07E-30 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 PACID_09620 c1251d6a6966be348df79c6b1a07ad75 545 SUPERFAMILY SSF51905 6 542 9.12E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_23440 84c73c4423d16b955677f0c5e6ed8601 156 Gene3D G3DSA:1.20.120.520 10 153 2.3E-21 T 14-10-2018 PACID_23440 84c73c4423d16b955677f0c5e6ed8601 156 Pfam PF01814 Hemerythrin HHE cation binding domain 16 138 1.8E-16 T 14-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 PACID_32740 837a970c8e5c6e09172b7c4f4e465638 500 Gene3D G3DSA:1.10.3080.10 59 499 3.3E-87 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 PACID_32740 837a970c8e5c6e09172b7c4f4e465638 500 PRINTS PR00762 Chloride channel signature 389 409 1.5E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_32740 837a970c8e5c6e09172b7c4f4e465638 500 PRINTS PR00762 Chloride channel signature 423 439 1.5E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_32740 837a970c8e5c6e09172b7c4f4e465638 500 PRINTS PR00762 Chloride channel signature 220 239 1.5E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_32740 837a970c8e5c6e09172b7c4f4e465638 500 PRINTS PR00762 Chloride channel signature 169 188 1.5E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_32740 837a970c8e5c6e09172b7c4f4e465638 500 PRINTS PR00762 Chloride channel signature 441 460 1.5E-21 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_32740 837a970c8e5c6e09172b7c4f4e465638 500 SUPERFAMILY SSF81340 41 485 7.98E-93 T 14-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 PACID_32740 837a970c8e5c6e09172b7c4f4e465638 500 Pfam PF00654 Voltage gated chloride channel 127 472 1.5E-83 T 14-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 PACID_16460 6f2415bbb0a200b758a8865e556ea7dc 309 SUPERFAMILY SSF53448 2 233 2.49E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_16460 6f2415bbb0a200b758a8865e556ea7dc 309 Gene3D G3DSA:3.90.550.10 3 178 3.8E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_16460 6f2415bbb0a200b758a8865e556ea7dc 309 Pfam PF13632 Glycosyl transferase family group 2 47 252 1.1E-16 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PACID_12670 1f19f32f496d6dfcafc6a2be10186950 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 226 245 6.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_12670 1f19f32f496d6dfcafc6a2be10186950 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 206 225 6.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_12670 1f19f32f496d6dfcafc6a2be10186950 286 PRINTS PR00164 ABC-2 type transport system membrane protein signature 52 73 6.7E-7 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_12670 1f19f32f496d6dfcafc6a2be10186950 286 Pfam PF01061 ABC-2 type transporter 49 247 5.6E-15 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 PACID_12670 1f19f32f496d6dfcafc6a2be10186950 286 PIRSF PIRSF006648 12 285 4.5E-17 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_03870 793bd79129f2fd2da42f421f7b5b2a38 472 Pfam PF00665 Integrase core domain 297 417 2.0E-7 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_03870 793bd79129f2fd2da42f421f7b5b2a38 472 SUPERFAMILY SSF53098 294 458 1.32E-22 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_03870 793bd79129f2fd2da42f421f7b5b2a38 472 Pfam PF13936 Helix-turn-helix domain 83 126 2.5E-19 T 14-10-2018 IPR025246 Transposase IS30-like HTH domain PACID_34290 a3308e2cfab3378114e519d46b817eb5 104 Pfam PF00893 Small Multidrug Resistance protein 1 91 5.2E-19 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 PACID_34290 a3308e2cfab3378114e519d46b817eb5 104 Gene3D G3DSA:1.10.3730.20 1 104 1.2E-22 T 14-10-2018 PACID_34290 a3308e2cfab3378114e519d46b817eb5 104 SUPERFAMILY SSF103481 5 101 3.4E-11 T 14-10-2018 PACID_24190 b85ff49e95fabd1d5cda4d982bde4bef 67 Pfam PF13822 Acyl-CoA carboxylase epsilon subunit 1 60 1.0E-16 T 14-10-2018 IPR032716 Acyl-CoA carboxylase epsilon subunit PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 SUPERFAMILY SSF48557 4 462 2.21E-155 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 1.2E-217 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 Pfam PF00206 Lyase 12 344 1.2E-109 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 ProSitePatterns PS00163 Fumarate lyases signature. 319 328 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 464 86.393 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 Pfam PF10415 Fumarase C C-terminus 411 463 1.8E-20 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 Gene3D G3DSA:1.10.40.30 411 468 1.1E-22 T 14-10-2018 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 Gene3D G3DSA:1.10.275.10 2 140 1.8E-55 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 PRINTS PR00145 Argininosuccinate lyase family signature 319 335 1.4E-8 T 14-10-2018 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 PRINTS PR00145 Argininosuccinate lyase family signature 177 197 1.4E-8 T 14-10-2018 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 PRINTS PR00145 Argininosuccinate lyase family signature 135 157 1.4E-8 T 14-10-2018 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 Gene3D G3DSA:1.20.200.10 141 406 1.0E-110 T 14-10-2018 PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 3.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 PRINTS PR00149 Fumarate lyase superfamily signature 273 300 3.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 PRINTS PR00149 Fumarate lyase superfamily signature 182 200 3.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family PACID_33440 9e0b1aae545e995a50316f2722bf0904 468 PRINTS PR00149 Fumarate lyase superfamily signature 319 335 3.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family PACID_16820 704796cc2e4593e3124a2a4087c3d800 688 Pfam PF03639 Glycosyl hydrolase family 81 271 681 4.3E-61 T 14-10-2018 IPR005200 Endo-1,3(4)-beta-glucanase GO:0052861 PACID_18180 9da1879a5868b2d32dff037c3132195a 466 Pfam PF00232 Glycosyl hydrolase family 1 4 461 2.1E-136 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_18180 9da1879a5868b2d32dff037c3132195a 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 284 298 4.0E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_18180 9da1879a5868b2d32dff037c3132195a 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 4.0E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_18180 9da1879a5868b2d32dff037c3132195a 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 4.0E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_18180 9da1879a5868b2d32dff037c3132195a 466 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 4.0E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 PACID_18180 9da1879a5868b2d32dff037c3132195a 466 SUPERFAMILY SSF51445 4 464 4.99E-141 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_18180 9da1879a5868b2d32dff037c3132195a 466 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site PACID_18180 9da1879a5868b2d32dff037c3132195a 466 Gene3D G3DSA:3.20.20.80 1 463 6.2E-151 T 14-10-2018 PACID_18180 9da1879a5868b2d32dff037c3132195a 466 TIGRFAM TIGR03356 BGL: beta-galactosidase 5 455 7.0E-152 T 14-10-2018 IPR017736 Glycoside hydrolase, family 1, beta-glucosidase GO:0008422|GO:0030245 KEGG: 00460+3.2.1.21|KEGG: 00500+3.2.1.21|KEGG: 00940+3.2.1.21|MetaCyc: PWY-3121|MetaCyc: PWY-5176|MetaCyc: PWY-6002|MetaCyc: PWY-6788|MetaCyc: PWY-7091|MetaCyc: PWY-7092|MetaCyc: PWY-7913 PACID_11280 553ee8b8383e57302529e77d83557343 314 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 76 299 1.9E-42 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_11280 553ee8b8383e57302529e77d83557343 314 SMART SM00062 75 302 1.0E-34 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF PACID_11280 553ee8b8383e57302529e77d83557343 314 Gene3D G3DSA:3.40.190.10 72 291 7.6E-50 T 14-10-2018 PACID_11280 553ee8b8383e57302529e77d83557343 314 SUPERFAMILY SSF53850 19 299 1.79E-45 T 14-10-2018 PACID_11280 553ee8b8383e57302529e77d83557343 314 Gene3D G3DSA:3.40.190.10 161 260 7.6E-50 T 14-10-2018 PACID_11280 553ee8b8383e57302529e77d83557343 314 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 99 112 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site PACID_20150 523a8d3476cd7046f66d10295693650c 365 Pfam PF00579 tRNA synthetases class I (W and Y) 37 317 7.6E-47 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_20150 523a8d3476cd7046f66d10295693650c 365 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 46 55 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 PACID_20150 523a8d3476cd7046f66d10295693650c 365 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 177 198 3.0E-24 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PACID_20150 523a8d3476cd7046f66d10295693650c 365 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 233 243 3.0E-24 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PACID_20150 523a8d3476cd7046f66d10295693650c 365 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 50 66 3.0E-24 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PACID_20150 523a8d3476cd7046f66d10295693650c 365 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 101 120 3.0E-24 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PACID_20150 523a8d3476cd7046f66d10295693650c 365 Gene3D G3DSA:1.10.240.10 226 331 4.7E-92 T 14-10-2018 PACID_20150 523a8d3476cd7046f66d10295693650c 365 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 38 361 1.3E-65 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 PACID_20150 523a8d3476cd7046f66d10295693650c 365 SUPERFAMILY SSF52374 39 363 2.45E-72 T 14-10-2018 PACID_20150 523a8d3476cd7046f66d10295693650c 365 Gene3D G3DSA:3.40.50.620 39 361 4.7E-92 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_06790 d126f69815d680cfd23eed03a9417d1f 101 Pfam PF13601 Winged helix DNA-binding domain 14 95 1.1E-9 T 14-10-2018 IPR027395 Winged helix DNA-binding domain PACID_06790 d126f69815d680cfd23eed03a9417d1f 101 SUPERFAMILY SSF46785 4 95 3.91E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_06790 d126f69815d680cfd23eed03a9417d1f 101 Gene3D G3DSA:1.10.10.10 3 99 2.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 SUPERFAMILY SSF46785 19 86 8.52E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 111 152 9.0E-11 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 Pfam PF01316 Arginine repressor, DNA binding domain 19 83 3.3E-19 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 Gene3D G3DSA:1.10.10.10 6 89 2.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 Hamap MF_00173 Arginine repressor [argR]. 1 176 49.559 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 Pfam PF02863 Arginine repressor, C-terminal domain 105 170 2.9E-21 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 Gene3D G3DSA:3.30.1360.40 96 173 1.4E-23 T 14-10-2018 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 TIGRFAM TIGR01529 argR_whole: arginine repressor 22 171 1.1E-39 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 SUPERFAMILY SSF55252 105 172 6.54E-18 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 PRINTS PR01467 Bacterial arginine repressor signature 54 69 6.2E-22 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 PRINTS PR01467 Bacterial arginine repressor signature 142 157 6.2E-22 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 PRINTS PR01467 Bacterial arginine repressor signature 38 51 6.2E-22 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 PACID_10260 21fbaa04d23872c6072f10e18bab82f1 186 PRINTS PR01467 Bacterial arginine repressor signature 112 125 6.2E-22 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 PACID_28060 78a8ac4fe58e516bc5c3ae8406f3ad5f 316 Pfam PF01619 Proline dehydrogenase 120 289 3.5E-12 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 PACID_28060 78a8ac4fe58e516bc5c3ae8406f3ad5f 316 Gene3D G3DSA:3.20.20.530 21 314 1.9E-64 T 14-10-2018 PACID_28060 78a8ac4fe58e516bc5c3ae8406f3ad5f 316 SUPERFAMILY SSF51730 41 312 3.33E-45 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like PACID_28060 78a8ac4fe58e516bc5c3ae8406f3ad5f 316 PIRSF PIRSF000196 5 316 7.4E-83 T 14-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 PACID_08110 bb87bc7a50e9c1565786077497fa93da 155 SUPERFAMILY SSF55804 7 146 2.75E-24 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_08110 bb87bc7a50e9c1565786077497fa93da 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 1.2E-18 T 14-10-2018 IPR002178 PTS EIIA type-2 domain PACID_08110 bb87bc7a50e9c1565786077497fa93da 155 Gene3D G3DSA:3.40.930.10 4 150 6.6E-34 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_10440 ec08f375ee20f9dceecad411ea572465 226 Pfam PF03006 Haemolysin-III related 23 217 8.8E-37 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 PACID_34150 7f78ba4179a635c71fd37d7613a34752 310 Gene3D G3DSA:3.20.20.150 9 304 2.4E-63 T 14-10-2018 PACID_34150 7f78ba4179a635c71fd37d7613a34752 310 SUPERFAMILY SSF51658 6 304 6.36E-54 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_34150 7f78ba4179a635c71fd37d7613a34752 310 Pfam PF01261 Xylose isomerase-like TIM barrel 44 231 8.1E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PACID_00470 3040cf99c92bfa200e4572d4203f786a 184 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 14-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 PACID_00470 3040cf99c92bfa200e4572d4203f786a 184 Gene3D G3DSA:3.20.20.70 1 164 7.5E-29 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_00470 3040cf99c92bfa200e4572d4203f786a 184 PIRSF PIRSF000368 1 166 3.5E-42 T 14-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 PACID_00470 3040cf99c92bfa200e4572d4203f786a 184 SUPERFAMILY SSF102114 22 113 7.06E-7 T 14-10-2018 PACID_00470 3040cf99c92bfa200e4572d4203f786a 184 Pfam PF13353 4Fe-4S single cluster domain 12 149 3.7E-29 T 14-10-2018 PACID_23380 92e404d4ba19b7dc59f63f114875de6b 632 Gene3D G3DSA:3.30.870.10 239 357 2.3E-6 T 14-10-2018 PACID_03380 f4e524913a2e72ac05266a7638c5ed0b 237 SUPERFAMILY SSF52317 2 188 1.68E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_03380 f4e524913a2e72ac05266a7638c5ed0b 237 Gene3D G3DSA:3.40.50.880 1 228 3.4E-49 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_03380 f4e524913a2e72ac05266a7638c5ed0b 237 Pfam PF00117 Glutamine amidotransferase class-I 41 185 7.7E-17 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_08690 78247a629ba6043f7b0b2926647c125a 263 SMART SM00382 48 224 3.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_08690 78247a629ba6043f7b0b2926647c125a 263 SUPERFAMILY SSF52540 9 236 5.22E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_08690 78247a629ba6043f7b0b2926647c125a 263 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_08690 78247a629ba6043f7b0b2926647c125a 263 Gene3D G3DSA:3.40.50.300 17 259 2.6E-59 T 14-10-2018 PACID_08690 78247a629ba6043f7b0b2926647c125a 263 Pfam PF00005 ABC transporter 40 176 4.8E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_29890 57af9711567943b4dc5c473fc34ebc5e 261 TIGRFAM TIGR02593 CRISPR_cas5: CRISPR-associated protein Cas5 5 47 1.7E-11 T 14-10-2018 IPR013422 CRISPR-associated protein Cas5, N-terminal PACID_29890 57af9711567943b4dc5c473fc34ebc5e 261 TIGRFAM TIGR01868 casD_Cas5e: CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI 5 230 8.8E-48 T 14-10-2018 IPR010147 CRISPR-associated protein, CasD GO:0003723|GO:0051607 PACID_29890 57af9711567943b4dc5c473fc34ebc5e 261 Pfam PF09704 CRISPR-associated protein (Cas_Cas5) 5 229 5.2E-53 T 14-10-2018 IPR021124 CRISPR-associated protein, Cas5 GO:0043571 PACID_05790 b8f939684b778b40da35125f61e74cd9 748 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 331 672 1.7E-77 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain PACID_05790 b8f939684b778b40da35125f61e74cd9 748 Gene3D G3DSA:1.50.10.10 30 742 3.5E-157 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 PACID_05790 b8f939684b778b40da35125f61e74cd9 748 SUPERFAMILY SSF48208 336 733 6.32E-39 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_05790 b8f939684b778b40da35125f61e74cd9 748 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 230 313 9.2E-13 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain PACID_05790 b8f939684b778b40da35125f61e74cd9 748 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 60 186 8.8E-24 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal PACID_28380 d5b349fbe2b6f7a108fa521e833e235f 231 Pfam PF13020 Domain of unknown function (DUF3883) 108 199 2.4E-19 T 14-10-2018 IPR024975 Domain of unknown function DUF3883 PACID_32240 5c91bd04fecdad052f6186df2158d37a 90 Pfam PF03795 YCII-related domain 4 85 7.9E-7 T 14-10-2018 IPR005545 YCII-related PACID_32240 5c91bd04fecdad052f6186df2158d37a 90 Gene3D G3DSA:3.30.70.1060 1 88 1.4E-9 T 14-10-2018 PACID_32240 5c91bd04fecdad052f6186df2158d37a 90 SUPERFAMILY SSF54909 1 87 5.36E-16 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_01500 e33b307c2b572ee8c6926b11172ceb91 403 Pfam PF01139 tRNA-splicing ligase RtcB 30 403 5.9E-122 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PACID_01500 e33b307c2b572ee8c6926b11172ceb91 403 SUPERFAMILY SSF103365 15 403 4.58E-122 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PACID_01500 e33b307c2b572ee8c6926b11172ceb91 403 Gene3D G3DSA:3.90.1860.10 11 403 2.2E-105 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 PACID_25310 ab82010a235e4089a37635a93cae6d34 412 Gene3D G3DSA:3.40.50.2000 193 352 2.5E-26 T 14-10-2018 PACID_25310 ab82010a235e4089a37635a93cae6d34 412 Gene3D G3DSA:3.40.50.2000 2 189 3.3E-15 T 14-10-2018 PACID_25310 ab82010a235e4089a37635a93cae6d34 412 Pfam PF13692 Glycosyl transferases group 1 201 334 4.5E-21 T 14-10-2018 PACID_25310 ab82010a235e4089a37635a93cae6d34 412 SUPERFAMILY SSF53756 5 364 3.53E-56 T 14-10-2018 PACID_25310 ab82010a235e4089a37635a93cae6d34 412 Pfam PF13579 Glycosyl transferase 4-like domain 18 169 1.7E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_00550 a889c8ac194c545f2e1bc62f13af1e2f 897 Gene3D G3DSA:3.80.10.10 211 351 4.7E-11 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily PACID_00550 a889c8ac194c545f2e1bc62f13af1e2f 897 SUPERFAMILY SSF52058 247 618 2.83E-7 T 14-10-2018 PACID_00550 a889c8ac194c545f2e1bc62f13af1e2f 897 Gene3D G3DSA:3.80.10.10 514 628 1.7E-7 T 14-10-2018 IPR032675 Leucine-rich repeat domain superfamily PACID_17970 6004162f90cd87163c8b9c16df05d0d1 362 Pfam PF02254 TrkA-N domain 145 261 2.4E-25 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 PACID_17970 6004162f90cd87163c8b9c16df05d0d1 362 Gene3D G3DSA:3.40.50.720 135 276 5.6E-36 T 14-10-2018 PACID_17970 6004162f90cd87163c8b9c16df05d0d1 362 Pfam PF07885 Ion channel 42 123 3.6E-14 T 14-10-2018 IPR013099 Potassium channel domain PACID_17970 6004162f90cd87163c8b9c16df05d0d1 362 Gene3D G3DSA:1.10.287.70 37 132 1.1E-14 T 14-10-2018 PACID_17970 6004162f90cd87163c8b9c16df05d0d1 362 SUPERFAMILY SSF81324 28 167 6.54E-22 T 14-10-2018 PACID_17970 6004162f90cd87163c8b9c16df05d0d1 362 SUPERFAMILY SSF51735 139 281 1.25E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_01180 772a6d144e8a33f80c443b0bcdc602d5 300 SUPERFAMILY SSF53697 4 220 2.22E-58 T 14-10-2018 PACID_01180 772a6d144e8a33f80c443b0bcdc602d5 300 Gene3D G3DSA:3.40.50.10490 1 190 2.0E-65 T 14-10-2018 PACID_01180 772a6d144e8a33f80c443b0bcdc602d5 300 Gene3D G3DSA:1.10.8.1080 191 259 8.2E-21 T 14-10-2018 PACID_01180 772a6d144e8a33f80c443b0bcdc602d5 300 Pfam PF01380 SIS domain 93 180 5.6E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 PACID_01180 772a6d144e8a33f80c443b0bcdc602d5 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 256 5.5E-91 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 PACID_01180 772a6d144e8a33f80c443b0bcdc602d5 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 157 174 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 PACID_29880 5d2263b34656e18d6a16d1b468e9ecb2 387 Pfam PF09344 CT1975-like protein 8 347 4.1E-111 T 14-10-2018 IPR010148 CRISPR-associated protein, CT1975 PACID_29880 5d2263b34656e18d6a16d1b468e9ecb2 387 TIGRFAM TIGR01869 casC_Cse4: CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI 7 318 5.5E-86 T 14-10-2018 IPR010148 CRISPR-associated protein, CT1975 PACID_07280 36a8632ded14b045df1fa8d56243c44a 297 Pfam PF00274 Fructose-bisphosphate aldolase class-I 52 181 5.9E-5 T 14-10-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_07280 36a8632ded14b045df1fa8d56243c44a 297 Gene3D G3DSA:3.20.20.70 1 297 5.8E-113 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_07280 36a8632ded14b045df1fa8d56243c44a 297 SUPERFAMILY SSF51569 5 296 9.94E-84 T 14-10-2018 PACID_08680 c1479632e5f2ee782848c89049e1f209 171 Gene3D G3DSA:3.40.220.10 1 171 1.4E-61 T 14-10-2018 PACID_08680 c1479632e5f2ee782848c89049e1f209 171 Pfam PF01661 Macro domain 20 137 7.5E-39 T 14-10-2018 IPR002589 Macro domain PACID_08680 c1479632e5f2ee782848c89049e1f209 171 SMART SM00506 3 137 1.0E-41 T 14-10-2018 IPR002589 Macro domain PACID_08680 c1479632e5f2ee782848c89049e1f209 171 SUPERFAMILY SSF52949 3 170 3.36E-54 T 14-10-2018 PACID_11880 d6052727c6d4e537386b210224fa1ba2 246 Pfam PF02591 C4-type zinc ribbon domain 204 238 6.5E-9 T 14-10-2018 IPR003743 C4-type zinc ribbon domain PACID_34060 a81856b728f846b034f71a6891b78760 287 Gene3D G3DSA:3.20.20.150 2 286 3.5E-49 T 14-10-2018 PACID_34060 a81856b728f846b034f71a6891b78760 287 Pfam PF01261 Xylose isomerase-like TIM barrel 20 223 1.4E-18 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PACID_34060 a81856b728f846b034f71a6891b78760 287 SUPERFAMILY SSF51658 1 282 4.42E-55 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_28540 b717af738b773743eed95c693fe6a420 336 Gene3D G3DSA:3.40.50.150 101 309 7.0E-14 T 14-10-2018 PACID_28540 b717af738b773743eed95c693fe6a420 336 SUPERFAMILY SSF53335 128 270 2.22E-15 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_33790 156ad92a173c138764ab0b1b8a2542fa 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 265 2.5E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_33790 156ad92a173c138764ab0b1b8a2542fa 276 Gene3D G3DSA:1.10.3720.10 2 263 1.8E-61 T 14-10-2018 IPR035906 MetI-like superfamily PACID_33790 156ad92a173c138764ab0b1b8a2542fa 276 SUPERFAMILY SSF161098 2 276 1.12E-69 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31130 9afe042a394471eaeb133a7367d80758 578 SUPERFAMILY SSF51905 4 560 2.81E-41 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_31130 9afe042a394471eaeb133a7367d80758 578 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 2.5E-5 T 14-10-2018 PACID_31130 9afe042a394471eaeb133a7367d80758 578 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 319 334 2.5E-5 T 14-10-2018 PACID_31130 9afe042a394471eaeb133a7367d80758 578 Pfam PF01593 Flavin containing amine oxidoreductase 107 560 3.6E-25 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 PACID_31130 9afe042a394471eaeb133a7367d80758 578 Pfam PF13450 NAD(P)-binding Rossmann-like domain 8 47 8.7E-9 T 14-10-2018 PACID_31130 9afe042a394471eaeb133a7367d80758 578 Gene3D G3DSA:3.50.50.60 2 83 2.1E-11 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_27030 0e3c68a4689c99e191fba8dd4f86e8d0 244 SUPERFAMILY SSF52540 4 235 4.9E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_27030 0e3c68a4689c99e191fba8dd4f86e8d0 244 Pfam PF00005 ABC transporter 23 165 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_27030 0e3c68a4689c99e191fba8dd4f86e8d0 244 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_27030 0e3c68a4689c99e191fba8dd4f86e8d0 244 SMART SM00382 30 236 7.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_27030 0e3c68a4689c99e191fba8dd4f86e8d0 244 Gene3D G3DSA:3.40.50.300 2 237 4.0E-61 T 14-10-2018 PACID_00930 767d7738432d1152bf3898718133843b 156 SUPERFAMILY SSF55804 2 146 2.49E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_00930 767d7738432d1152bf3898718133843b 156 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 146 1.5E-31 T 14-10-2018 IPR002178 PTS EIIA type-2 domain PACID_00930 767d7738432d1152bf3898718133843b 156 Gene3D G3DSA:3.40.930.10 5 153 1.8E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_16160 d4c56ad67d832d534e44d16c93468eb8 356 Pfam PF09949 Uncharacterized conserved protein (DUF2183) 204 300 7.4E-32 T 14-10-2018 IPR019236 Domain of unknown function DUF2183 PACID_14300 fbdcdc3d227a37d0f93157a35b183176 106 Pfam PF15595 Immunity protein 51 22 97 2.0E-8 T 14-10-2018 IPR028956 Immunity protein 51 PACID_16210 d7132f1c92c5fd01bcddb617447efa11 347 Pfam PF11268 Protein of unknown function (DUF3071) 3 122 4.6E-30 T 14-10-2018 IPR021421 Protein of unknown function DUF3071 PACID_02360 003304cabc2e2b2f1248622a9f7bdc57 162 Gene3D G3DSA:1.10.3450.10 43 159 3.1E-13 T 14-10-2018 PACID_02360 003304cabc2e2b2f1248622a9f7bdc57 162 SUPERFAMILY SSF140663 30 154 2.88E-28 T 14-10-2018 IPR023203 TTHA0068-like superfamily PACID_02360 003304cabc2e2b2f1248622a9f7bdc57 162 Pfam PF03745 Domain of unknown function (DUF309) 47 105 7.2E-21 T 14-10-2018 IPR005500 Protein of unknown function DUF309 PACID_32480 aa5cd6ab1fe04aedeaacbd5b15ccd0be 365 Gene3D G3DSA:3.20.20.10 13 231 3.7E-17 T 14-10-2018 IPR029066 PLP-binding barrel PACID_32480 aa5cd6ab1fe04aedeaacbd5b15ccd0be 365 SUPERFAMILY SSF51419 21 241 1.16E-13 T 14-10-2018 IPR029066 PLP-binding barrel PACID_32480 aa5cd6ab1fe04aedeaacbd5b15ccd0be 365 Pfam PF01168 Alanine racemase, N-terminal domain 21 194 1.9E-16 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 PACID_25490 40187fe8ae33eb0af462f41fcc44c9ad 327 SUPERFAMILY SSF161098 95 304 8.83E-16 T 14-10-2018 IPR035906 MetI-like superfamily PACID_25490 40187fe8ae33eb0af462f41fcc44c9ad 327 Gene3D G3DSA:1.10.3720.10 87 321 5.7E-19 T 14-10-2018 IPR035906 MetI-like superfamily PACID_25490 40187fe8ae33eb0af462f41fcc44c9ad 327 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 325 3.2E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_16000 8d9d214cd0b9b3bd580bd009e8ad3ac2 171 Pfam PF03477 ATP cone domain 46 132 4.4E-13 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 PACID_16000 8d9d214cd0b9b3bd580bd009e8ad3ac2 171 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 6.5E-47 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PACID_16000 8d9d214cd0b9b3bd580bd009e8ad3ac2 171 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 151 73.868 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 PACID_14830 df516bed3754ef66711bb129c5182030 64 SUPERFAMILY SSF46955 2 48 4.03E-5 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PACID_28450 014a497a49eb68a818ec0a8659394ae1 187 Gene3D G3DSA:3.30.70.560 23 180 1.7E-45 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PACID_28450 014a497a49eb68a818ec0a8659394ae1 187 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 27 155 6.2E-37 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PACID_28450 014a497a49eb68a818ec0a8659394ae1 187 SUPERFAMILY SSF55083 25 176 1.44E-43 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PACID_28450 014a497a49eb68a818ec0a8659394ae1 187 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 28 155 2.6E-32 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 PACID_28250 834d5acd50a69ab266c423ee0309f7f1 562 Gene3D G3DSA:1.10.3720.10 298 557 2.0E-43 T 14-10-2018 IPR035906 MetI-like superfamily PACID_28250 834d5acd50a69ab266c423ee0309f7f1 562 Gene3D G3DSA:1.10.3720.10 20 278 8.4E-52 T 14-10-2018 IPR035906 MetI-like superfamily PACID_28250 834d5acd50a69ab266c423ee0309f7f1 562 SUPERFAMILY SSF161098 300 552 8.94E-42 T 14-10-2018 IPR035906 MetI-like superfamily PACID_28250 834d5acd50a69ab266c423ee0309f7f1 562 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 368 549 3.5E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_28250 834d5acd50a69ab266c423ee0309f7f1 562 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 269 1.2E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_28250 834d5acd50a69ab266c423ee0309f7f1 562 SUPERFAMILY SSF161098 24 269 5.33E-45 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32170 c0cba0c3e039a6bd3df4c19d0a33f6b2 469 Gene3D G3DSA:3.40.50.880 1 269 8.3E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_32170 c0cba0c3e039a6bd3df4c19d0a33f6b2 469 SUPERFAMILY SSF52317 107 253 2.39E-10 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_34140 8e37471e2a37c93718d83e626e21c498 335 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 335 43.253 T 14-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 PACID_34140 8e37471e2a37c93718d83e626e21c498 335 SUPERFAMILY SSF51735 3 151 1.85E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_34140 8e37471e2a37c93718d83e626e21c498 335 Gene3D G3DSA:3.30.360.10 142 264 1.9E-98 T 14-10-2018 PACID_34140 8e37471e2a37c93718d83e626e21c498 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 123 4.7E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_34140 8e37471e2a37c93718d83e626e21c498 335 Gene3D G3DSA:3.40.50.720 4 317 1.9E-98 T 14-10-2018 PACID_34140 8e37471e2a37c93718d83e626e21c498 335 SUPERFAMILY SSF55347 131 288 6.67E-12 T 14-10-2018 PACID_20780 f8d3a8505427d9c4f9b56bf48baacd89 354 Gene3D G3DSA:3.10.50.40 240 348 2.5E-18 T 14-10-2018 PACID_20780 f8d3a8505427d9c4f9b56bf48baacd89 354 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 118 206 9.8E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PACID_20780 f8d3a8505427d9c4f9b56bf48baacd89 354 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 260 347 4.0E-11 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain PACID_20780 f8d3a8505427d9c4f9b56bf48baacd89 354 Gene3D G3DSA:3.10.50.40 101 219 4.6E-21 T 14-10-2018 PACID_20780 f8d3a8505427d9c4f9b56bf48baacd89 354 SUPERFAMILY SSF54534 107 209 9.04E-22 T 14-10-2018 PACID_20780 f8d3a8505427d9c4f9b56bf48baacd89 354 SUPERFAMILY SSF54534 238 347 3.54E-21 T 14-10-2018 PACID_16440 9c198fad791cab8228812faf224ff769 250 SUPERFAMILY SSF88713 28 220 6.67E-47 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PACID_16440 9c198fad791cab8228812faf224ff769 250 Gene3D G3DSA:3.20.20.370 18 227 6.9E-49 T 14-10-2018 PACID_16440 9c198fad791cab8228812faf224ff769 250 Pfam PF01522 Polysaccharide deacetylase 30 148 6.6E-28 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 PACID_00480 e92fefd7d8cf361a866c73654dbe0f6e 76 SUPERFAMILY SSF47598 36 75 9.78E-5 T 14-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 PACID_00480 e92fefd7d8cf361a866c73654dbe0f6e 76 Pfam PF01402 Ribbon-helix-helix protein, copG family 37 73 1.5E-4 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_05810 468d35601f73c1675f2decabbaeaa8a5 514 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 61 514 7.4E-128 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase PACID_05810 468d35601f73c1675f2decabbaeaa8a5 514 Pfam PF13727 CoA-binding domain 111 259 2.6E-12 T 14-10-2018 PACID_05810 468d35601f73c1675f2decabbaeaa8a5 514 Gene3D G3DSA:3.40.50.720 188 309 2.6E-6 T 14-10-2018 PACID_05810 468d35601f73c1675f2decabbaeaa8a5 514 Pfam PF02397 Bacterial sugar transferase 323 508 3.8E-67 T 14-10-2018 IPR003362 Bacterial sugar transferase PACID_24970 0e23d85947905f2556d2204ff48001e1 161 Pfam PF00293 NUDIX domain 11 133 7.2E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_24970 0e23d85947905f2556d2204ff48001e1 161 Gene3D G3DSA:3.90.79.10 7 151 3.0E-27 T 14-10-2018 PACID_24970 0e23d85947905f2556d2204ff48001e1 161 SUPERFAMILY SSF55811 1 141 1.01E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_24970 0e23d85947905f2556d2204ff48001e1 161 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PACID_13130 008da934938dfc3fc4c46a4ccfdf51be 136 SUPERFAMILY SSF50022 45 134 1.7E-21 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PACID_13130 008da934938dfc3fc4c46a4ccfdf51be 136 Pfam PF00355 Rieske [2Fe-2S] domain 58 120 6.4E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PACID_13130 008da934938dfc3fc4c46a4ccfdf51be 136 Gene3D G3DSA:2.102.10.10 22 136 1.6E-21 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PACID_13130 008da934938dfc3fc4c46a4ccfdf51be 136 PRINTS PR00162 Rieske 2Fe-2S subunit signature 95 107 1.2E-6 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PACID_13130 008da934938dfc3fc4c46a4ccfdf51be 136 PRINTS PR00162 Rieske 2Fe-2S subunit signature 108 120 1.2E-6 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PACID_13130 008da934938dfc3fc4c46a4ccfdf51be 136 PRINTS PR00162 Rieske 2Fe-2S subunit signature 75 86 1.2E-6 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PACID_32250 017ac5fcf5cc7e67acd1d7d9c6ec3ef0 123 Pfam PF04134 Protein of unknown function, DUF393 11 116 2.9E-15 T 14-10-2018 IPR007263 Protein of unknown function DUF393 PACID_22180 b7faac977fc611c696aaeb02e6b0e152 97 Pfam PF01381 Helix-turn-helix 19 67 2.8E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_22180 b7faac977fc611c696aaeb02e6b0e152 97 SUPERFAMILY SSF47413 10 67 4.5E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_22180 b7faac977fc611c696aaeb02e6b0e152 97 SMART SM00530 18 72 9.3E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_22180 b7faac977fc611c696aaeb02e6b0e152 97 Gene3D G3DSA:1.10.260.40 8 70 3.9E-14 T 14-10-2018 PACID_17440 c5e77085a355dbc9a48a15942dd0aaa7 210 ProSitePatterns PS00893 Nudix box signature. 21 42 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 PACID_17440 c5e77085a355dbc9a48a15942dd0aaa7 210 SUPERFAMILY SSF55811 1 113 6.5E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_17440 c5e77085a355dbc9a48a15942dd0aaa7 210 Gene3D G3DSA:3.90.79.10 1 116 4.8E-16 T 14-10-2018 PACID_17440 c5e77085a355dbc9a48a15942dd0aaa7 210 Pfam PF00293 NUDIX domain 1 96 6.0E-10 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_16950 80064100ff39ac33d7c0fd5ccb0685da 261 SUPERFAMILY SSF53448 9 223 6.75E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_16950 80064100ff39ac33d7c0fd5ccb0685da 261 Gene3D G3DSA:3.90.550.10 5 247 4.4E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_16950 80064100ff39ac33d7c0fd5ccb0685da 261 Pfam PF00535 Glycosyl transferase family 2 13 171 1.3E-26 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PACID_30670 9b0e3a2b3cd91232c658c2b0aa51fdcc 97 SUPERFAMILY SSF54637 2 72 3.45E-10 T 14-10-2018 IPR029069 HotDog domain superfamily PACID_30670 9b0e3a2b3cd91232c658c2b0aa51fdcc 97 Gene3D G3DSA:3.10.129.10 1 96 6.0E-12 T 14-10-2018 PACID_06800 e757b89b92ce6200228fd6333276697b 499 Pfam PF07690 Major Facilitator Superfamily 24 414 5.8E-54 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_06800 e757b89b92ce6200228fd6333276697b 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 1.9E-7 T 14-10-2018 PACID_06800 e757b89b92ce6200228fd6333276697b 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 405 424 1.9E-7 T 14-10-2018 PACID_06800 e757b89b92ce6200228fd6333276697b 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 1.9E-7 T 14-10-2018 PACID_06800 e757b89b92ce6200228fd6333276697b 499 PRINTS PR01036 Tetracycline resistance protein TetB signature 82 104 1.9E-7 T 14-10-2018 PACID_06800 e757b89b92ce6200228fd6333276697b 499 SUPERFAMILY SSF103473 6 498 3.79E-73 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_06800 e757b89b92ce6200228fd6333276697b 499 Gene3D G3DSA:1.20.1720.10 20 232 7.9E-46 T 14-10-2018 PACID_06800 e757b89b92ce6200228fd6333276697b 499 Gene3D G3DSA:1.20.1250.20 271 497 5.2E-19 T 14-10-2018 PACID_02840 146f78db69c95e96b9be2ceedaa6e50f 311 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 35 259 1.0E-27 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region PACID_02840 146f78db69c95e96b9be2ceedaa6e50f 311 Gene3D G3DSA:2.120.10.30 2 311 8.1E-108 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like PACID_02840 146f78db69c95e96b9be2ceedaa6e50f 311 SUPERFAMILY SSF63829 22 288 5.36E-55 T 14-10-2018 PACID_09450 8e8056070c59ee75e26d9a6a48acad93 169 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 156 2.5E-25 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase PACID_09450 8e8056070c59ee75e26d9a6a48acad93 169 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 8 156 1.0E-24 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase PACID_09450 8e8056070c59ee75e26d9a6a48acad93 169 Gene3D G3DSA:3.40.50.10420 1 167 1.6E-32 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PACID_09450 8e8056070c59ee75e26d9a6a48acad93 169 PIRSF PIRSF006806 5 158 1.3E-24 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase PACID_09450 8e8056070c59ee75e26d9a6a48acad93 169 SUPERFAMILY SSF100950 5 163 2.51E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_19500 611f2b91fbd3fe2cba506a6004968e5c 484 SUPERFAMILY SSF102588 227 450 2.88E-11 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 PACID_19500 611f2b91fbd3fe2cba506a6004968e5c 484 Gene3D G3DSA:3.40.50.10320 225 455 1.7E-10 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 PACID_19500 611f2b91fbd3fe2cba506a6004968e5c 484 Pfam PF02585 GlcNAc-PI de-N-acetylase 230 412 7.7E-14 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 PACID_20850 15c06a17dc2a7aecb48cb02cfa05003d 561 PIRSF PIRSF003128 1 559 6.0E-135 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PACID_20850 15c06a17dc2a7aecb48cb02cfa05003d 561 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 555 4.4E-137 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 PACID_20850 15c06a17dc2a7aecb48cb02cfa05003d 561 SUPERFAMILY SSF52540 1 519 4.46E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_20850 15c06a17dc2a7aecb48cb02cfa05003d 561 Pfam PF02463 RecF/RecN/SMC N terminal domain 8 514 4.0E-12 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal PACID_20850 15c06a17dc2a7aecb48cb02cfa05003d 561 Gene3D G3DSA:3.40.50.300 1 180 6.0E-15 T 14-10-2018 PACID_20850 15c06a17dc2a7aecb48cb02cfa05003d 561 Gene3D G3DSA:3.40.50.300 253 555 7.1E-52 T 14-10-2018 PACID_20010 817da952aadeef68c5d0aa0184098e0e 464 TIGRFAM TIGR03624 TIGR03624: putative hydrolase 77 436 1.6E-88 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 PACID_20010 817da952aadeef68c5d0aa0184098e0e 464 SUPERFAMILY SSF55486 76 436 1.46E-86 T 14-10-2018 PACID_20010 817da952aadeef68c5d0aa0184098e0e 464 Pfam PF10103 Zincin-like metallopeptidase 77 435 4.2E-103 T 14-10-2018 IPR018766 Zinicin-like metallopeptidase type 2 PACID_08860 5998ba4591da09174e727589107a42b1 217 Pfam PF02570 Precorrin-8X methylmutase 11 208 3.8E-68 T 14-10-2018 IPR003722 Cobalamin biosynthesis precorrin-8X methylmutase CobH/CbiC GO:0009236|GO:0016993 PACID_08860 5998ba4591da09174e727589107a42b1 217 Gene3D G3DSA:3.40.50.10230 1 211 1.0E-76 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 PACID_08860 5998ba4591da09174e727589107a42b1 217 SUPERFAMILY SSF63965 3 208 3.79E-69 T 14-10-2018 IPR036588 Precorrin-8X methylmutase CobH/CbiC superfamily GO:0009236|GO:0016993 PACID_27360 46e5d5521f3e12e91cba10d43900ba26 130 Gene3D G3DSA:3.40.50.1010 1 129 9.2E-39 T 14-10-2018 PACID_27360 46e5d5521f3e12e91cba10d43900ba26 130 Pfam PF01850 PIN domain 1 124 1.8E-14 T 14-10-2018 IPR002716 PIN domain PACID_27360 46e5d5521f3e12e91cba10d43900ba26 130 SUPERFAMILY SSF88723 1 125 2.42E-17 T 14-10-2018 IPR029060 PIN-like domain superfamily PACID_27360 46e5d5521f3e12e91cba10d43900ba26 130 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 1 130 12.458 T 14-10-2018 IPR022907 VapC family GO:0004540 PACID_04970 a52abbdc50b9b09fb5f2d4003fe94432 204 Gene3D G3DSA:3.90.79.10 2 164 7.0E-27 T 14-10-2018 PACID_04970 a52abbdc50b9b09fb5f2d4003fe94432 204 SUPERFAMILY SSF55811 10 159 7.31E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_04970 a52abbdc50b9b09fb5f2d4003fe94432 204 Pfam PF00293 NUDIX domain 29 150 2.4E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_07690 c8f6afd29a5da40ba2e9d96a760f417d 344 SUPERFAMILY SSF53850 65 341 1.36E-51 T 14-10-2018 PACID_07690 c8f6afd29a5da40ba2e9d96a760f417d 344 Gene3D G3DSA:3.40.190.120 166 279 2.2E-82 T 14-10-2018 PACID_07690 c8f6afd29a5da40ba2e9d96a760f417d 344 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 65 335 8.5E-55 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 PACID_07690 c8f6afd29a5da40ba2e9d96a760f417d 344 Gene3D G3DSA:3.40.190.10 67 340 2.2E-82 T 14-10-2018 PACID_12870 d3ade8950f7f0b34032919d690b8b249 239 Gene3D G3DSA:3.10.20.310 50 117 8.5E-6 T 14-10-2018 PACID_12870 d3ade8950f7f0b34032919d690b8b249 239 Pfam PF03799 Cell division protein FtsQ 126 216 2.1E-4 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB PACID_12870 d3ade8950f7f0b34032919d690b8b249 239 Pfam PF08478 POTRA domain, FtsQ-type 51 118 4.5E-13 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type PACID_00840 07e0f10a7a41670ba9af7d620dab57c4 476 Pfam PF12801 4Fe-4S binding domain 77 120 7.0E-10 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_00840 07e0f10a7a41670ba9af7d620dab57c4 476 Pfam PF12801 4Fe-4S binding domain 156 189 4.3E-6 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain PACID_00840 07e0f10a7a41670ba9af7d620dab57c4 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 240 251 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site PACID_00840 07e0f10a7a41670ba9af7d620dab57c4 476 SUPERFAMILY SSF54862 161 282 1.22E-7 T 14-10-2018 PACID_28190 4eda0bf473a5bdd99ab11fac6fbb9aa1 275 Gene3D G3DSA:3.40.50.10090 81 191 1.4E-25 T 14-10-2018 PACID_28190 4eda0bf473a5bdd99ab11fac6fbb9aa1 275 Gene3D G3DSA:3.40.50.10090 192 273 1.2E-5 T 14-10-2018 PACID_28190 4eda0bf473a5bdd99ab11fac6fbb9aa1 275 Pfam PF02602 Uroporphyrinogen-III synthase HemD 87 267 2.1E-39 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_28190 4eda0bf473a5bdd99ab11fac6fbb9aa1 275 SUPERFAMILY SSF69618 23 272 1.29E-39 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_09310 dae5e55e09b5e9ac7b3e2be2f6cef426 293 Gene3D G3DSA:3.20.20.70 3 293 7.6E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_09310 dae5e55e09b5e9ac7b3e2be2f6cef426 293 SUPERFAMILY SSF51569 34 287 2.49E-30 T 14-10-2018 PACID_28560 c73a6ca63e6e4027df179581383ee7b2 163 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 74 2.2E-12 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_28560 c73a6ca63e6e4027df179581383ee7b2 163 Gene3D G3DSA:3.40.50.1240 1 160 6.7E-39 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_28560 c73a6ca63e6e4027df179581383ee7b2 163 SMART SM00855 3 111 6.0E-14 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 PACID_28560 c73a6ca63e6e4027df179581383ee7b2 163 SUPERFAMILY SSF53254 1 145 7.5E-22 T 14-10-2018 IPR029033 Histidine phosphatase superfamily PACID_32260 80d987569ab02be4801871ad635371bf 366 SUPERFAMILY SSF51395 2 351 7.33E-112 T 14-10-2018 PACID_32260 80d987569ab02be4801871ad635371bf 366 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 347 1.6E-70 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 PACID_32260 80d987569ab02be4801871ad635371bf 366 Gene3D G3DSA:3.20.20.70 4 362 1.1E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_16880 bef72b0466ad63eebd6ecf3a90aa2d61 765 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 506 634 9.3E-29 T 14-10-2018 IPR025299 CstA, C-terminal domain PACID_16880 bef72b0466ad63eebd6ecf3a90aa2d61 765 Pfam PF02554 Carbon starvation protein CstA 39 408 2.3E-156 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 PACID_07060 d8cb55fe993b4970f24c3168c197ce27 242 SMART SM00862 164 238 4.8E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_07060 d8cb55fe993b4970f24c3168c197ce27 242 Gene3D G3DSA:3.40.50.2300 4 143 2.1E-37 T 14-10-2018 PACID_07060 d8cb55fe993b4970f24c3168c197ce27 242 SUPERFAMILY SSF52172 13 140 1.18E-40 T 14-10-2018 IPR011006 CheY-like superfamily PACID_07060 d8cb55fe993b4970f24c3168c197ce27 242 Gene3D G3DSA:1.10.10.10 144 242 5.7E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_07060 d8cb55fe993b4970f24c3168c197ce27 242 SUPERFAMILY SSF46894 141 239 3.68E-30 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 PACID_07060 d8cb55fe993b4970f24c3168c197ce27 242 Pfam PF00072 Response regulator receiver domain 19 128 1.1E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_07060 d8cb55fe993b4970f24c3168c197ce27 242 SMART SM00448 17 128 2.1E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 PACID_07060 d8cb55fe993b4970f24c3168c197ce27 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 238 8.1E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 PACID_07120 527eda476ec89f4011d153ce09f70c66 145 Pfam PF13411 MerR HTH family regulatory protein 19 85 1.3E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_07120 527eda476ec89f4011d153ce09f70c66 145 SUPERFAMILY SSF46955 18 109 4.4E-20 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily PACID_07120 527eda476ec89f4011d153ce09f70c66 145 SMART SM00422 18 87 2.3E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 PACID_07120 527eda476ec89f4011d153ce09f70c66 145 Gene3D G3DSA:1.10.1660.10 17 111 1.1E-21 T 14-10-2018 PACID_27740 0fefdf2a57ef89535c9d2abb55027cc1 598 TIGRFAM TIGR03769 P_ac_wall_RPT: actinobacterial surface-anchored protein domain 186 226 3.4E-11 T 14-10-2018 IPR022435 Surface-anchored repeat, actinobacteria PACID_32570 08e732a9c7d6528046b3f13ae0d828f1 429 Pfam PF09594 Glycosyltransferase family 87 65 308 5.5E-36 T 14-10-2018 IPR018584 Glycosyltransferase family 87 GO:0016758 PACID_09590 cb62418f572ebc64f46bfb74e7fa1a49 267 Pfam PF03537 Glycoside-hydrolase family GH114 36 254 5.9E-49 T 14-10-2018 IPR004352 Glycoside-hydrolase family GH114, TIM-barrel domain PACID_09590 cb62418f572ebc64f46bfb74e7fa1a49 267 SUPERFAMILY SSF51445 60 234 6.74E-22 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 Gene3D G3DSA:1.10.10.10 64 199 3.4E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 SUPERFAMILY SSF46785 67 175 4.18E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 PRINTS PR00598 Bacterial regulatory protein MarR family signature 101 116 3.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 136 3.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 PRINTS PR00598 Bacterial regulatory protein MarR family signature 149 169 3.6E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 SMART SM00347 63 159 1.3E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 ProSitePatterns PS01117 MarR-type HTH domain signature. 99 133 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site PACID_29240 8a3fefb5cdb4f91ae8d4ad0d315f240e 290 Pfam PF01047 MarR family 70 125 2.5E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 PACID_24640 ea611c746c5ac2c7e9e75184be352657 162 SUPERFAMILY SSF52121 16 158 2.35E-48 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24640 ea611c746c5ac2c7e9e75184be352657 162 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 21 155 5.1E-47 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24640 ea611c746c5ac2c7e9e75184be352657 162 Gene3D G3DSA:3.40.50.960 7 160 1.5E-53 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24640 ea611c746c5ac2c7e9e75184be352657 162 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 17 160 26.122 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_24640 ea611c746c5ac2c7e9e75184be352657 162 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 23 155 1.7E-37 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 PACID_30220 5ed729641d3139f8d7ec01910575d50a 282 SUPERFAMILY SSF161098 11 282 2.71E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30220 5ed729641d3139f8d7ec01910575d50a 282 Gene3D G3DSA:1.10.3720.10 7 273 1.5E-54 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30220 5ed729641d3139f8d7ec01910575d50a 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 268 1.8E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_21990 044bc7c19bf4eb23a001508796b86eb6 427 Pfam PF02163 Peptidase family M50 12 382 3.0E-45 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 PACID_21990 044bc7c19bf4eb23a001508796b86eb6 427 SUPERFAMILY SSF50156 125 234 5.26E-14 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 PACID_21990 044bc7c19bf4eb23a001508796b86eb6 427 Pfam PF13180 PDZ domain 177 234 1.9E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 PACID_21990 044bc7c19bf4eb23a001508796b86eb6 427 Gene3D G3DSA:2.30.42.10 175 263 1.3E-15 T 14-10-2018 PACID_28720 49e0f503943604e05d218e61fc409bf8 365 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 5 331 3.9E-108 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 PACID_28720 49e0f503943604e05d218e61fc409bf8 365 Gene3D G3DSA:3.20.20.140 1 360 3.1E-135 T 14-10-2018 PACID_28720 49e0f503943604e05d218e61fc409bf8 365 SUPERFAMILY SSF51556 5 334 3.23E-91 T 14-10-2018 IPR032466 Metal-dependent hydrolase PACID_14940 9e32adb8c22c1ad28f111d5b0686164e 169 Pfam PF11343 Protein of unknown function (DUF3145) 11 164 1.3E-58 T 14-10-2018 IPR021491 Protein of unknown function DUF3145 PACID_14190 b3006b259f19878840033fa61ea9a83c 446 Pfam PF07730 Histidine kinase 234 300 1.4E-16 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_14190 b3006b259f19878840033fa61ea9a83c 446 Gene3D G3DSA:3.30.565.10 306 433 3.0E-29 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_14190 b3006b259f19878840033fa61ea9a83c 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 428 7.1E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_14190 b3006b259f19878840033fa61ea9a83c 446 SMART SM00387 339 437 7.3E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase PACID_14190 b3006b259f19878840033fa61ea9a83c 446 SUPERFAMILY SSF55874 334 432 6.17E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_02610 267bf3ccfa19459d4db32d393f55e949 105 Gene3D G3DSA:2.30.30.110 1 105 5.7E-17 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor PACID_02610 267bf3ccfa19459d4db32d393f55e949 105 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 101 1.9E-17 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 PACID_02610 267bf3ccfa19459d4db32d393f55e949 105 SUPERFAMILY SSF50118 2 104 5.56E-20 T 14-10-2018 PACID_20180 bb421ef187a4811f3c14707a9f57f758 162 Pfam PF10698 Protein of unknown function (DUF2505) 11 160 4.0E-31 T 14-10-2018 IPR019639 Protein of unknown function DUF2505 PACID_20180 bb421ef187a4811f3c14707a9f57f758 162 SUPERFAMILY SSF55961 7 150 4.21E-6 T 14-10-2018 PACID_31710 d0cc49f1ef59c567dccc580ff5099523 726 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 239 661 4.8E-64 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_31710 d0cc49f1ef59c567dccc580ff5099523 726 SUPERFAMILY SSF81442 233 718 2.88E-75 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_31710 d0cc49f1ef59c567dccc580ff5099523 726 Gene3D G3DSA:1.20.210.10 177 717 1.4E-167 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_20130 18eb96494c1d317ab5b21fcef5b92c77 228 Gene3D G3DSA:1.20.1260.10 5 227 5.1E-18 T 14-10-2018 IPR012347 Ferritin-like PACID_00540 6b515dfe48884a17d35b74afda00c3de 326 Gene3D G3DSA:1.50.10.20 75 316 7.1E-12 T 14-10-2018 PACID_00540 6b515dfe48884a17d35b74afda00c3de 326 SUPERFAMILY SSF48239 107 285 1.96E-12 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PACID_30140 8b01d39c76a12686d92144d6d13e4d19 454 Pfam PF00872 Transposase, Mutator family 45 415 1.3E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_18280 2bbabb948a11303ae5add74aff2d9231 522 Pfam PF00425 chorismate binding enzyme 238 490 2.1E-89 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal PACID_18280 2bbabb948a11303ae5add74aff2d9231 522 SUPERFAMILY SSF56322 24 498 2.09E-141 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PACID_18280 2bbabb948a11303ae5add74aff2d9231 522 Pfam PF04715 Anthranilate synthase component I, N terminal region 35 175 3.6E-28 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PACID_18280 2bbabb948a11303ae5add74aff2d9231 522 PRINTS PR00095 Anthranilate synthase component I signature 432 446 3.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PACID_18280 2bbabb948a11303ae5add74aff2d9231 522 PRINTS PR00095 Anthranilate synthase component I signature 352 365 3.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PACID_18280 2bbabb948a11303ae5add74aff2d9231 522 PRINTS PR00095 Anthranilate synthase component I signature 447 461 3.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PACID_18280 2bbabb948a11303ae5add74aff2d9231 522 PRINTS PR00095 Anthranilate synthase component I signature 338 351 3.8E-23 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 PACID_18280 2bbabb948a11303ae5add74aff2d9231 522 Gene3D G3DSA:3.60.120.10 1 508 1.5E-172 T 14-10-2018 IPR005801 ADC synthase GO:0009058 PACID_32980 09a3118566f29c3f5d23e8437293c95d 183 SUPERFAMILY SSF51735 1 128 1.12E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_32980 09a3118566f29c3f5d23e8437293c95d 183 Gene3D G3DSA:3.90.180.10 123 180 2.7E-44 T 14-10-2018 PACID_32980 09a3118566f29c3f5d23e8437293c95d 183 Gene3D G3DSA:3.40.50.720 1 122 2.7E-44 T 14-10-2018 PACID_32980 09a3118566f29c3f5d23e8437293c95d 183 Pfam PF13602 Zinc-binding dehydrogenase 43 181 5.9E-16 T 14-10-2018 PACID_07790 0ee95a24e8675dfd1378950bcfb45951 267 Gene3D G3DSA:1.20.1440.20 18 194 7.3E-61 T 14-10-2018 IPR023353 LemA-like domain superfamily PACID_07790 0ee95a24e8675dfd1378950bcfb45951 267 SUPERFAMILY SSF140478 28 183 1.18E-49 T 14-10-2018 IPR023353 LemA-like domain superfamily PACID_07790 0ee95a24e8675dfd1378950bcfb45951 267 Pfam PF04011 LemA family 6 194 1.2E-65 T 14-10-2018 IPR007156 LemA PACID_20170 1374754590480953b99715def637524a 286 Pfam PF02811 PHP domain 4 123 2.2E-8 T 14-10-2018 IPR004013 PHP domain GO:0003824 PACID_20170 1374754590480953b99715def637524a 286 Gene3D G3DSA:3.20.20.140 3 250 2.1E-80 T 14-10-2018 PACID_20170 1374754590480953b99715def637524a 286 SMART SM00481 3 68 1.7E-15 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal PACID_20170 1374754590480953b99715def637524a 286 Gene3D G3DSA:1.10.150.650 96 168 2.1E-80 T 14-10-2018 PACID_20170 1374754590480953b99715def637524a 286 SUPERFAMILY SSF89550 2 255 1.51E-40 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PACID_06640 be962818bd909bcbec84302a0a9621bd 311 Pfam PF03547 Membrane transport protein 4 134 8.5E-9 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 PACID_06640 be962818bd909bcbec84302a0a9621bd 311 Pfam PF03547 Membrane transport protein 157 300 5.2E-19 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 PACID_17950 1e21fce8607c4db155e2d5245eb51163 476 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 109 123 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 PACID_17950 1e21fce8607c4db155e2d5245eb51163 476 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 99 335 7.0E-10 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme PACID_17950 1e21fce8607c4db155e2d5245eb51163 476 TIGRFAM TIGR00260 thrC: threonine synthase 89 440 2.6E-66 T 14-10-2018 IPR004450 Threonine synthase-like PACID_17950 1e21fce8607c4db155e2d5245eb51163 476 Gene3D G3DSA:3.40.50.1100 105 444 3.6E-130 T 14-10-2018 PACID_17950 1e21fce8607c4db155e2d5245eb51163 476 Gene3D G3DSA:3.40.50.1100 115 456 3.6E-130 T 14-10-2018 PACID_17950 1e21fce8607c4db155e2d5245eb51163 476 SUPERFAMILY SSF53686 2 474 2.76E-136 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme PACID_17950 1e21fce8607c4db155e2d5245eb51163 476 Pfam PF14821 Threonine synthase N terminus 2 85 3.1E-24 T 14-10-2018 IPR029144 Threonine synthase, N-terminal PACID_17950 1e21fce8607c4db155e2d5245eb51163 476 Gene3D G3DSA:3.90.1380.10 1 95 1.1E-27 T 14-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily PACID_07270 b7ceb910c965372902eaf5c54fb1567b 166 Pfam PF01613 Flavin reductase like domain 23 164 5.1E-26 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PACID_07270 b7ceb910c965372902eaf5c54fb1567b 166 Gene3D G3DSA:2.30.110.10 3 165 2.3E-33 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 PACID_07270 b7ceb910c965372902eaf5c54fb1567b 166 SUPERFAMILY SSF50475 17 164 3.29E-27 T 14-10-2018 PACID_07270 b7ceb910c965372902eaf5c54fb1567b 166 SMART SM00903 20 163 1.2E-21 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 PACID_14480 8059f08b162e2875f4258f6558cdaee7 595 Pfam PF06100 MCRA family 43 540 1.5E-189 T 14-10-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 PACID_14480 8059f08b162e2875f4258f6558cdaee7 595 SUPERFAMILY SSF51905 34 448 1.04E-12 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_14480 8059f08b162e2875f4258f6558cdaee7 595 Gene3D G3DSA:3.50.50.60 25 157 9.1E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_14480 8059f08b162e2875f4258f6558cdaee7 595 Gene3D G3DSA:3.50.50.60 178 375 1.9E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_14480 8059f08b162e2875f4258f6558cdaee7 595 Gene3D G3DSA:3.50.50.60 465 557 1.4E-26 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_02790 855f0d411bda85175699f062a4179078 159 Pfam PF01967 MoaC family 17 150 8.0E-45 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02790 855f0d411bda85175699f062a4179078 159 Gene3D G3DSA:3.30.70.640 4 159 1.2E-54 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02790 855f0d411bda85175699f062a4179078 159 SUPERFAMILY SSF55040 13 155 2.09E-49 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_02790 855f0d411bda85175699f062a4179078 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 7 152 1.7E-53 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 PACID_23780 9caece946c205db8d0fc763a6f8c6042 159 Gene3D G3DSA:3.40.30.10 6 158 4.6E-39 T 14-10-2018 PACID_23780 9caece946c205db8d0fc763a6f8c6042 159 PIRSF PIRSF000239 2 157 2.2E-17 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PACID_23780 9caece946c205db8d0fc763a6f8c6042 159 Pfam PF00578 AhpC/TSA family 8 129 1.1E-32 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 PACID_23780 9caece946c205db8d0fc763a6f8c6042 159 SUPERFAMILY SSF52833 5 157 8.97E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily PACID_09790 f698e1f674572a3e29c118e79353e6fe 68 SUPERFAMILY SSF69047 8 57 3.66E-8 T 14-10-2018 IPR036629 YjbJ superfamily PACID_09790 f698e1f674572a3e29c118e79353e6fe 68 Gene3D G3DSA:1.10.1470.10 5 59 7.7E-6 T 14-10-2018 IPR036629 YjbJ superfamily PACID_09790 f698e1f674572a3e29c118e79353e6fe 68 Pfam PF05532 CsbD-like 8 51 9.5E-13 T 14-10-2018 IPR008462 CsbD-like domain PACID_30280 85909d2918d6c5e8ba56163d05f5e177 220 Gene3D G3DSA:3.20.20.70 1 219 9.3E-84 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_30280 85909d2918d6c5e8ba56163d05f5e177 220 SUPERFAMILY SSF51569 6 217 4.4E-71 T 14-10-2018 PACID_30280 85909d2918d6c5e8ba56163d05f5e177 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 8 219 31.878 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 PACID_30280 85909d2918d6c5e8ba56163d05f5e177 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 10 214 7.6E-64 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_30280 85909d2918d6c5e8ba56163d05f5e177 220 SMART SM01133 9 217 1.7E-84 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_30280 85909d2918d6c5e8ba56163d05f5e177 220 PIRSF PIRSF001357 3 218 4.0E-69 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_30280 85909d2918d6c5e8ba56163d05f5e177 220 Pfam PF01791 DeoC/LacD family aldolase 23 215 3.5E-19 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 PACID_15220 caf83e883dc27590f5f06b1e243dea91 91 SMART SM00530 13 68 1.4E-4 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_15220 caf83e883dc27590f5f06b1e243dea91 91 Pfam PF13560 Helix-turn-helix domain 10 68 3.2E-9 T 14-10-2018 PACID_15220 caf83e883dc27590f5f06b1e243dea91 91 Gene3D G3DSA:1.10.260.40 4 76 2.1E-13 T 14-10-2018 PACID_15220 caf83e883dc27590f5f06b1e243dea91 91 SUPERFAMILY SSF47413 6 72 5.33E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_26290 9a74d3a48b0a54d27cee1fc13a71622b 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 137 156 3.8E-33 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26290 9a74d3a48b0a54d27cee1fc13a71622b 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 329 348 3.8E-33 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26290 9a74d3a48b0a54d27cee1fc13a71622b 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 167 191 3.8E-33 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26290 9a74d3a48b0a54d27cee1fc13a71622b 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 241 265 3.8E-33 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26290 9a74d3a48b0a54d27cee1fc13a71622b 506 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 381 407 3.8E-33 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26290 9a74d3a48b0a54d27cee1fc13a71622b 506 Pfam PF00361 Proton-conducting membrane transporter 131 423 3.1E-58 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26290 9a74d3a48b0a54d27cee1fc13a71622b 506 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 492 2.4E-143 T 14-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_08390 904746c5576064bc93a9af3a59b87377 246 SUPERFAMILY SSF53335 15 160 7.59E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_08390 904746c5576064bc93a9af3a59b87377 246 Gene3D G3DSA:3.40.50.150 16 243 2.1E-35 T 14-10-2018 PACID_08390 904746c5576064bc93a9af3a59b87377 246 Pfam PF08241 Methyltransferase domain 51 134 9.9E-17 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 PACID_03440 f8af1ced8fc53f1f8f7b695db91f2d2e 467 Gene3D G3DSA:3.40.630.10 35 233 1.9E-12 T 14-10-2018 PACID_03440 f8af1ced8fc53f1f8f7b695db91f2d2e 467 SUPERFAMILY SSF53187 38 311 1.89E-14 T 14-10-2018 PACID_19740 7ffe88f8ef6afe2f5a8ef4a88c63c486 358 Pfam PF03641 Possible lysine decarboxylase 123 255 2.0E-25 T 14-10-2018 IPR031100 LOG family PACID_19740 7ffe88f8ef6afe2f5a8ef4a88c63c486 358 SUPERFAMILY SSF102405 75 256 1.68E-46 T 14-10-2018 PACID_19740 7ffe88f8ef6afe2f5a8ef4a88c63c486 358 Gene3D G3DSA:3.40.50.450 56 296 4.0E-56 T 14-10-2018 PACID_19740 7ffe88f8ef6afe2f5a8ef4a88c63c486 358 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 81 256 8.0E-32 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 Pfam PF02872 5'-nucleotidase, C-terminal domain 337 505 4.6E-32 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 SUPERFAMILY SSF55816 358 536 8.89E-37 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 SUPERFAMILY SSF56300 41 316 1.48E-51 T 14-10-2018 PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 Gene3D G3DSA:3.60.21.10 46 325 6.1E-55 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 PRINTS PR01607 Apyrase family signature 401 424 1.6E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 PRINTS PR01607 Apyrase family signature 213 230 1.6E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 PRINTS PR01607 Apyrase family signature 240 263 1.6E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 PRINTS PR01607 Apyrase family signature 480 499 1.6E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 PRINTS PR01607 Apyrase family signature 267 287 1.6E-17 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PACID_32030 d86f7882f05ca83e4c32eb5173f87268 706 Gene3D G3DSA:3.90.780.10 349 544 8.8E-46 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 PACID_10860 99cb851ea88b75b7fedcf72638b77313 113 SUPERFAMILY SSF88723 16 101 7.46E-5 T 14-10-2018 IPR029060 PIN-like domain superfamily PACID_10860 99cb851ea88b75b7fedcf72638b77313 113 Pfam PF01850 PIN domain 16 101 1.8E-5 T 14-10-2018 IPR002716 PIN domain PACID_16250 061d3af5e613ec5dc387ae922d5f7f6f 146 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 144 4.8E-47 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 PACID_16250 061d3af5e613ec5dc387ae922d5f7f6f 146 SUPERFAMILY SSF51283 7 145 6.02E-46 T 14-10-2018 IPR036157 dUTPase-like superfamily PACID_16250 061d3af5e613ec5dc387ae922d5f7f6f 146 Pfam PF00692 dUTPase 15 144 3.1E-30 T 14-10-2018 IPR029054 dUTPase-like PACID_16250 061d3af5e613ec5dc387ae922d5f7f6f 146 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 1 145 29.342 T 14-10-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|KEGG: 00983+3.6.1.23 PACID_16250 061d3af5e613ec5dc387ae922d5f7f6f 146 Gene3D G3DSA:2.70.40.10 2 145 5.9E-48 T 14-10-2018 IPR036157 dUTPase-like superfamily PACID_17290 aac20e3bc522755f826a0d8b0dd06baf 122 SUPERFAMILY SSF46785 9 89 2.23E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_17290 aac20e3bc522755f826a0d8b0dd06baf 122 Gene3D G3DSA:1.10.10.10 14 122 6.5E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_17290 aac20e3bc522755f826a0d8b0dd06baf 122 SMART SM00345 20 79 5.7E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_17290 aac20e3bc522755f826a0d8b0dd06baf 122 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 79 1.4E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 PACID_21640 69532654c28c21e3b8a62a92793f0076 196 SUPERFAMILY SSF55729 11 164 1.46E-18 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_21640 69532654c28c21e3b8a62a92793f0076 196 Gene3D G3DSA:3.40.630.30 10 184 1.1E-24 T 14-10-2018 PACID_21640 69532654c28c21e3b8a62a92793f0076 196 Pfam PF00583 Acetyltransferase (GNAT) family 61 154 7.8E-9 T 14-10-2018 IPR000182 GNAT domain PACID_00830 732f8654198932d553c27d4eb378eb4d 362 SUPERFAMILY SSF53807 75 341 9.81E-42 T 14-10-2018 PACID_00830 732f8654198932d553c27d4eb378eb4d 362 Gene3D G3DSA:3.40.50.1980 189 362 2.2E-60 T 14-10-2018 PACID_00830 732f8654198932d553c27d4eb378eb4d 362 Pfam PF01497 Periplasmic binding protein 92 338 9.9E-30 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain PACID_00830 732f8654198932d553c27d4eb378eb4d 362 Gene3D G3DSA:3.40.50.1980 66 184 5.1E-32 T 14-10-2018 PACID_04230 5d4f4fa571ef88808ceb37064b66dcb3 266 Pfam PF00005 ABC transporter 24 174 8.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_04230 5d4f4fa571ef88808ceb37064b66dcb3 266 Gene3D G3DSA:3.40.50.300 2 261 4.2E-57 T 14-10-2018 PACID_04230 5d4f4fa571ef88808ceb37064b66dcb3 266 SMART SM00382 33 255 9.7E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_04230 5d4f4fa571ef88808ceb37064b66dcb3 266 SUPERFAMILY SSF52540 6 243 2.66E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_01550 c27f5542b72c16f89fe8fb5262b88b63 629 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 100 146 1.0E-6 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like PACID_01550 c27f5542b72c16f89fe8fb5262b88b63 629 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 166 278 7.3E-16 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like PACID_14870 71bfd87e58f06f88305b37d8a9d383b6 283 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 262 3.4E-37 T 14-10-2018 PACID_14870 71bfd87e58f06f88305b37d8a9d383b6 283 SUPERFAMILY SSF56784 4 266 4.28E-44 T 14-10-2018 IPR036412 HAD-like superfamily PACID_14870 71bfd87e58f06f88305b37d8a9d383b6 283 Gene3D G3DSA:3.30.1240.10 85 191 7.0E-45 T 14-10-2018 PACID_14870 71bfd87e58f06f88305b37d8a9d383b6 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 235 1.1E-14 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 PACID_14870 71bfd87e58f06f88305b37d8a9d383b6 283 Gene3D G3DSA:3.40.50.1000 6 262 7.0E-45 T 14-10-2018 IPR023214 HAD superfamily PACID_15060 f6a84ac4857643b5ceef0e98436aa7f8 192 Gene3D G3DSA:3.40.50.2020 4 191 2.4E-51 T 14-10-2018 PACID_15060 f6a84ac4857643b5ceef0e98436aa7f8 192 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 14 189 33.57 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 PACID_15060 f6a84ac4857643b5ceef0e98436aa7f8 192 SUPERFAMILY SSF53271 17 184 1.44E-34 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_15060 f6a84ac4857643b5ceef0e98436aa7f8 192 Pfam PF00156 Phosphoribosyl transferase domain 21 176 3.0E-19 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 PACID_31070 a214aed70a0fa4e2e8994534a063f01f 225 Pfam PF12787 EcsC protein family 61 223 2.0E-10 T 14-10-2018 IPR024787 EcsC protein PACID_11570 8d7a01c933367c82a8ffaa7ea3649d2d 477 Gene3D G3DSA:3.40.50.1220 292 471 5.0E-84 T 14-10-2018 PACID_11570 8d7a01c933367c82a8ffaa7ea3649d2d 477 SUPERFAMILY SSF52467 298 470 2.62E-70 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily PACID_11570 8d7a01c933367c82a8ffaa7ea3649d2d 477 PIRSF PIRSF000204 10 472 3.2E-191 T 14-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 PACID_11570 8d7a01c933367c82a8ffaa7ea3649d2d 477 Pfam PF02233 NAD(P) transhydrogenase beta subunit 16 468 1.4E-188 T 14-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 PACID_18290 05cfd5a5e704fdcba10380f73c335ff7 119 Gene3D G3DSA:3.10.20.400 3 97 1.3E-41 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 PACID_18290 05cfd5a5e704fdcba10380f73c335ff7 119 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 110 6.0E-22 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PACID_18290 05cfd5a5e704fdcba10380f73c335ff7 119 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 6.9E-35 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PACID_18290 05cfd5a5e704fdcba10380f73c335ff7 119 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 7 110 32.107 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 PACID_18290 05cfd5a5e704fdcba10380f73c335ff7 119 SUPERFAMILY SSF141734 6 109 2.35E-47 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 PACID_06990 4b1200f4f893328dc8f5d79d8d140df6 294 Pfam PF03618 Kinase/pyrophosphorylase 8 268 6.7E-80 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 PACID_06990 4b1200f4f893328dc8f5d79d8d140df6 294 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 6 274 52.7 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein PACID_07480 0ff8a5c40ae97ca96d036c34c318a466 288 Gene3D G3DSA:3.40.50.720 4 270 2.3E-81 T 14-10-2018 PACID_07480 0ff8a5c40ae97ca96d036c34c318a466 288 SUPERFAMILY SSF51735 2 246 1.71E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_07480 0ff8a5c40ae97ca96d036c34c318a466 288 Pfam PF05368 NmrA-like family 3 220 1.9E-17 T 14-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 PACID_07480 0ff8a5c40ae97ca96d036c34c318a466 288 Gene3D G3DSA:3.90.25.10 139 271 2.3E-81 T 14-10-2018 PACID_17590 d7fa2ae855af06dcde333b17ff2df936 676 Gene3D G3DSA:1.10.8.630 12 119 5.1E-14 T 14-10-2018 PACID_17590 d7fa2ae855af06dcde333b17ff2df936 676 Gene3D G3DSA:3.40.50.300 120 326 1.2E-30 T 14-10-2018 PACID_17590 d7fa2ae855af06dcde333b17ff2df936 676 SUPERFAMILY SSF52540 188 280 5.1E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17590 d7fa2ae855af06dcde333b17ff2df936 676 Hamap MF_00983 Probable primosomal protein N' [priA]. 18 675 16.947 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 PACID_06060 c8fa77d362b936cff2e1841f0956554c 104 Pfam PF01910 Thiamine-binding protein 3 96 4.1E-27 T 14-10-2018 IPR002767 Thiamine-binding protein PACID_06060 c8fa77d362b936cff2e1841f0956554c 104 SUPERFAMILY SSF89957 2 104 1.19E-25 T 14-10-2018 IPR029756 MTH1187/YkoF-like PACID_06060 c8fa77d362b936cff2e1841f0956554c 104 Gene3D G3DSA:3.30.70.930 1 102 6.9E-24 T 14-10-2018 IPR029756 MTH1187/YkoF-like PACID_11010 64e2431bdba9f04de8015be78b2f603f 417 SUPERFAMILY SSF55874 272 401 6.24E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_11010 64e2431bdba9f04de8015be78b2f603f 417 Gene3D G3DSA:3.30.565.10 271 404 6.0E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_11010 64e2431bdba9f04de8015be78b2f603f 417 Pfam PF07730 Histidine kinase 185 251 9.5E-9 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_22650 4d6daef7c0ce473fcbf3b2fac4d12ce3 297 Pfam PF02628 Cytochrome oxidase assembly protein 16 60 7.5E-10 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 PACID_20880 40eb719275b07ea79d4bbe387fcdbc99 217 Pfam PF02361 Cobalt transport protein 17 178 5.1E-7 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component PACID_33520 7d92df70bc85e8f9dae5556c11c11db6 986 SUPERFAMILY SSF75011 59 375 6.8E-26 T 14-10-2018 PACID_33520 7d92df70bc85e8f9dae5556c11c11db6 986 TIGRFAM TIGR02276 beta_rpt_yvtn: 40-residue YVTN family beta-propeller repeat 308 337 3.3E-8 T 14-10-2018 IPR011964 YVTN beta-propeller repeat PACID_33520 7d92df70bc85e8f9dae5556c11c11db6 986 Pfam PF04185 Phosphoesterase family 523 795 1.8E-5 T 14-10-2018 IPR007312 Phosphoesterase GO:0016788 PACID_33520 7d92df70bc85e8f9dae5556c11c11db6 986 SUPERFAMILY SSF53649 517 801 6.54E-7 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 PACID_33520 7d92df70bc85e8f9dae5556c11c11db6 986 Gene3D G3DSA:2.130.10.10 67 273 2.6E-16 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PACID_33520 7d92df70bc85e8f9dae5556c11c11db6 986 Gene3D G3DSA:2.130.10.10 274 490 9.5E-11 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 PACID_23940 af6b868b4c2fc13cfacad42de445bb5a 705 Pfam PF02446 4-alpha-glucanotransferase 179 676 6.1E-113 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PACID_23940 af6b868b4c2fc13cfacad42de445bb5a 705 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 132 680 1.1E-98 T 14-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 PACID_23940 af6b868b4c2fc13cfacad42de445bb5a 705 Gene3D G3DSA:3.20.20.80 169 682 1.8E-119 T 14-10-2018 PACID_23940 af6b868b4c2fc13cfacad42de445bb5a 705 SUPERFAMILY SSF51445 171 689 1.88E-137 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_32130 1c90ece272ba4d75aed5abcfa479f8c0 293 SUPERFAMILY SSF161098 21 293 2.34E-61 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32130 1c90ece272ba4d75aed5abcfa479f8c0 293 Gene3D G3DSA:1.10.3720.10 16 280 2.4E-58 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32130 1c90ece272ba4d75aed5abcfa479f8c0 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 280 2.9E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_16770 5c8ccde8fe7354acac61f311aabf96c2 370 SUPERFAMILY SSF159659 20 267 4.18E-65 T 14-10-2018 PACID_16770 5c8ccde8fe7354acac61f311aabf96c2 370 Gene3D G3DSA:3.40.50.10900 24 226 2.6E-73 T 14-10-2018 IPR038389 Proteasome assembly chaperone 2 superfamily PACID_16770 5c8ccde8fe7354acac61f311aabf96c2 370 Pfam PF09754 PAC2 family 31 244 4.2E-32 T 14-10-2018 IPR019151 Proteasome assembly chaperone 2 PACID_16770 5c8ccde8fe7354acac61f311aabf96c2 370 Gene3D G3DSA:1.10.287.100 227 265 2.6E-73 T 14-10-2018 PACID_00960 7c73bbef4caeb6323a3197246a74dc12 527 SUPERFAMILY SSF53067 256 504 1.55E-51 T 14-10-2018 PACID_00960 7c73bbef4caeb6323a3197246a74dc12 527 Gene3D G3DSA:3.30.420.40 251 515 2.6E-63 T 14-10-2018 PACID_00960 7c73bbef4caeb6323a3197246a74dc12 527 SUPERFAMILY SSF53067 13 255 1.28E-57 T 14-10-2018 PACID_00960 7c73bbef4caeb6323a3197246a74dc12 527 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 451 1.1E-31 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 PACID_00960 7c73bbef4caeb6323a3197246a74dc12 527 Gene3D G3DSA:3.30.420.40 11 250 5.6E-65 T 14-10-2018 PACID_00960 7c73bbef4caeb6323a3197246a74dc12 527 PIRSF PIRSF000538 10 509 1.9E-114 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 PACID_00960 7c73bbef4caeb6323a3197246a74dc12 527 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 12 253 2.5E-49 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 PACID_23580 092a7bc42013e2aeca4b8909a90b6f35 166 SUPERFAMILY SSF55469 1 166 6.15E-37 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PACID_23580 092a7bc42013e2aeca4b8909a90b6f35 166 Gene3D G3DSA:3.40.109.10 86 165 8.8E-9 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PACID_23580 092a7bc42013e2aeca4b8909a90b6f35 166 Gene3D G3DSA:3.40.109.10 1 85 4.5E-23 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 PACID_23580 092a7bc42013e2aeca4b8909a90b6f35 166 Pfam PF00881 Nitroreductase family 8 66 5.2E-15 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 PACID_14530 801f0aaf941142fb7cd24334a7301230 142 Gene3D G3DSA:3.50.50.60 85 139 4.0E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_14530 801f0aaf941142fb7cd24334a7301230 142 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 40 138 9.0E-11 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 PACID_14530 801f0aaf941142fb7cd24334a7301230 142 Gene3D G3DSA:3.50.50.60 3 84 4.0E-31 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_14530 801f0aaf941142fb7cd24334a7301230 142 SUPERFAMILY SSF51905 5 139 1.19E-21 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily PACID_14530 801f0aaf941142fb7cd24334a7301230 142 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 76 94 3.8E-6 T 14-10-2018 PACID_14530 801f0aaf941142fb7cd24334a7301230 142 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 127 142 3.8E-6 T 14-10-2018 PACID_14530 801f0aaf941142fb7cd24334a7301230 142 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 1 7 3.8E-6 T 14-10-2018 PACID_19450 e8ce287806c4f9dd02773a8c90fd0820 86 Gene3D G3DSA:1.10.1200.10 4 86 2.6E-20 T 14-10-2018 IPR036736 ACP-like superfamily PACID_19450 e8ce287806c4f9dd02773a8c90fd0820 86 SUPERFAMILY SSF47336 9 85 9.64E-10 T 14-10-2018 IPR036736 ACP-like superfamily PACID_24160 e23962eff81c63ecc48c81f65c0976fd 238 SUPERFAMILY SSF52317 26 203 6.07E-22 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_24160 e23962eff81c63ecc48c81f65c0976fd 238 Pfam PF03575 Peptidase family S51 5 202 4.9E-37 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 PACID_24160 e23962eff81c63ecc48c81f65c0976fd 238 Gene3D G3DSA:3.40.50.880 17 221 5.2E-32 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 52 1133 12.729 T 14-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 Pfam PF14579 Helix-hairpin-helix motif 839 966 4.7E-19 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 345 766 1.2E-136 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 Gene3D G3DSA:3.20.20.140 47 322 7.1E-76 T 14-10-2018 PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 53 852 1.4E-184 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 Pfam PF02811 PHP domain 54 226 7.3E-29 T 14-10-2018 IPR004013 PHP domain GO:0003824 PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 Gene3D G3DSA:2.40.50.140 1031 1129 2.7E-5 T 14-10-2018 PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 SUPERFAMILY SSF89550 52 267 4.71E-24 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 PACID_23680 29d6386bd7e39ab8913b576331527dff 1133 SMART SM00481 53 120 4.5E-25 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal PACID_31550 8aaeecf18d708f3530b9311b606f9162 250 Pfam PF01988 VIT family 34 242 2.6E-58 T 14-10-2018 IPR008217 Ccc1 family PACID_16140 6e3e7180184a3012f705d8be9f0efcc6 161 Gene3D G3DSA:3.40.1050.10 2 161 3.6E-41 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PACID_16140 6e3e7180184a3012f705d8be9f0efcc6 161 Pfam PF00484 Carbonic anhydrase 31 95 1.3E-11 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PACID_16140 6e3e7180184a3012f705d8be9f0efcc6 161 SUPERFAMILY SSF53056 3 160 2.88E-27 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 PACID_16140 6e3e7180184a3012f705d8be9f0efcc6 161 SMART SM00947 23 161 5.9E-17 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 PACID_17710 7b289d0c2d349bc3aa7d9d126d05fcef 178 Gene3D G3DSA:1.10.940.10 29 161 5.9E-31 T 14-10-2018 IPR035926 NusB-like superfamily PACID_17710 7b289d0c2d349bc3aa7d9d126d05fcef 178 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 36 166 20.166 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 PACID_17710 7b289d0c2d349bc3aa7d9d126d05fcef 178 Pfam PF01029 NusB family 40 161 2.6E-24 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 PACID_17710 7b289d0c2d349bc3aa7d9d126d05fcef 178 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 38 163 2.6E-29 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 PACID_17710 7b289d0c2d349bc3aa7d9d126d05fcef 178 SUPERFAMILY SSF48013 38 161 4.58E-28 T 14-10-2018 IPR035926 NusB-like superfamily PACID_23900 e04a54236ffefb69f437e38aa1773387 183 Pfam PF09438 Domain of unknown function (DUF2017) 37 180 2.7E-30 T 14-10-2018 IPR018561 Domain of unknown function DUF2017 PACID_12260 8db9e9a60f39986e8a51418a1372ee1e 578 SUPERFAMILY SSF81342 34 312 1.73E-62 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 PACID_12260 8db9e9a60f39986e8a51418a1372ee1e 578 Gene3D G3DSA:1.20.810.10 20 468 9.0E-95 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 PACID_12260 8db9e9a60f39986e8a51418a1372ee1e 578 Pfam PF13631 Cytochrome b(N-terminal)/b6/petB 134 307 8.8E-58 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 PACID_31370 9bc26afc4e9ad659c2b173b62a104658 267 SUPERFAMILY SSF161098 9 196 1.09E-41 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31370 9bc26afc4e9ad659c2b173b62a104658 267 TIGRFAM TIGR03004 ectoine_ehuC: ectoine/hydroxyectoine ABC transporter, permease protein EhuC 8 212 1.3E-66 T 14-10-2018 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC PACID_31370 9bc26afc4e9ad659c2b173b62a104658 267 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 105 3.3E-30 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 PACID_31370 9bc26afc4e9ad659c2b173b62a104658 267 Gene3D G3DSA:1.10.3720.10 1 213 1.3E-50 T 14-10-2018 IPR035906 MetI-like superfamily PACID_31370 9bc26afc4e9ad659c2b173b62a104658 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 203 4.0E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_22950 5fd92c2010df1775f4c751c4f501aa13 443 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 54 96 1.9E-7 T 14-10-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger PACID_22950 5fd92c2010df1775f4c751c4f501aa13 443 Pfam PF01610 Transposase 172 427 9.4E-61 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PACID_27540 2fcda7de8e999f9655d5ff535bcb1db4 350 Gene3D G3DSA:3.20.20.30 18 332 1.1E-45 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PACID_27540 2fcda7de8e999f9655d5ff535bcb1db4 350 SUPERFAMILY SSF51679 8 331 2.12E-52 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 PACID_27540 2fcda7de8e999f9655d5ff535bcb1db4 350 Pfam PF00296 Luciferase-like monooxygenase 17 257 7.8E-23 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 PACID_04650 549c58e2f2b4bdd734c8c4c53b8297ce 423 Gene3D G3DSA:3.40.50.2000 225 384 2.6E-25 T 14-10-2018 PACID_04650 549c58e2f2b4bdd734c8c4c53b8297ce 423 Pfam PF00534 Glycosyl transferases group 1 239 380 2.7E-15 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_04650 549c58e2f2b4bdd734c8c4c53b8297ce 423 SUPERFAMILY SSF53756 8 411 4.04E-35 T 14-10-2018 PACID_04650 549c58e2f2b4bdd734c8c4c53b8297ce 423 Gene3D G3DSA:3.40.50.2000 153 224 2.6E-25 T 14-10-2018 PACID_08940 02719efb195c35ff05ec73172606e81a 263 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 226 2.0E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 PACID_08940 02719efb195c35ff05ec73172606e81a 263 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 13 248 1.6E-87 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 PACID_08940 02719efb195c35ff05ec73172606e81a 263 SUPERFAMILY SSF53790 9 253 1.15E-70 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 PACID_08940 02719efb195c35ff05ec73172606e81a 263 Gene3D G3DSA:3.40.1010.10 11 127 5.9E-41 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 PACID_08940 02719efb195c35ff05ec73172606e81a 263 Gene3D G3DSA:3.30.950.10 128 261 2.6E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 PACID_28680 c6710bdff643e846f8cb1ba3414b522a 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 305 2.4E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_28680 c6710bdff643e846f8cb1ba3414b522a 309 SUPERFAMILY SSF161098 99 290 5.63E-30 T 14-10-2018 IPR035906 MetI-like superfamily PACID_28680 c6710bdff643e846f8cb1ba3414b522a 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 29 81 2.7E-12 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain PACID_28680 c6710bdff643e846f8cb1ba3414b522a 309 Gene3D G3DSA:1.10.3720.10 92 303 2.7E-27 T 14-10-2018 IPR035906 MetI-like superfamily PACID_03360 c65f03e3e4f1380445f170df6c1e0115 419 Pfam PF13173 AAA domain 24 131 9.9E-7 T 14-10-2018 PACID_03360 c65f03e3e4f1380445f170df6c1e0115 419 Pfam PF13635 Domain of unknown function (DUF4143) 243 366 1.5E-12 T 14-10-2018 IPR025420 Domain of unknown function DUF4143 PACID_06320 a555bb9fbbb0d495aff21ec4c8745548 540 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 297 324 3.5E-9 T 14-10-2018 IPR009148 Streptococcal non-M secreted SibA PACID_06320 a555bb9fbbb0d495aff21ec4c8745548 540 PRINTS PR01852 Streptococcal non-M secreted SibA protein signature 461 485 3.5E-9 T 14-10-2018 IPR009148 Streptococcal non-M secreted SibA PACID_06320 a555bb9fbbb0d495aff21ec4c8745548 540 SUPERFAMILY SSF54001 410 522 2.06E-13 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily PACID_06320 a555bb9fbbb0d495aff21ec4c8745548 540 Pfam PF05257 CHAP domain 421 511 2.6E-11 T 14-10-2018 IPR007921 CHAP domain PACID_06320 a555bb9fbbb0d495aff21ec4c8745548 540 Gene3D G3DSA:3.90.1720.10 417 539 1.4E-23 T 14-10-2018 PACID_26280 08e0415262e3f864f2261099e8922dad 538 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 29 527 6.5E-110 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PACID_26280 08e0415262e3f864f2261099e8922dad 538 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 23 527 17.206 T 14-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 PACID_26280 08e0415262e3f864f2261099e8922dad 538 Pfam PF00361 Proton-conducting membrane transporter 167 467 2.3E-65 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_29970 3c22fd39aa08375b9af268890dee0bbb 526 SUPERFAMILY SSF48208 335 517 4.0E-11 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 PACID_21840 7a09a481ddcf7bd5a27221f08512df28 88 Gene3D G3DSA:3.30.1230.10 1 78 7.8E-12 T 14-10-2018 IPR035931 YlxR-like superfamily PACID_21840 7a09a481ddcf7bd5a27221f08512df28 88 SUPERFAMILY SSF64376 6 75 1.31E-16 T 14-10-2018 IPR035931 YlxR-like superfamily PACID_21840 7a09a481ddcf7bd5a27221f08512df28 88 Pfam PF04296 Protein of unknown function (DUF448) 9 72 1.2E-17 T 14-10-2018 IPR007393 Domain of unknown function DUF448 PACID_01190 410b9d27e4375a3e3c4f9290079e4321 175 Gene3D G3DSA:3.40.630.30 2 173 1.8E-26 T 14-10-2018 PACID_01190 410b9d27e4375a3e3c4f9290079e4321 175 SUPERFAMILY SSF55729 4 172 6.97E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_01190 410b9d27e4375a3e3c4f9290079e4321 175 Pfam PF13302 Acetyltransferase (GNAT) domain 9 145 8.5E-12 T 14-10-2018 IPR000182 GNAT domain PACID_32290 5981a8f7c9f97fea4d06a45c080332f0 289 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 282 17.81 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PACID_32290 5981a8f7c9f97fea4d06a45c080332f0 289 Pfam PF02673 Bacitracin resistance protein BacA 6 277 1.4E-82 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PACID_32290 5981a8f7c9f97fea4d06a45c080332f0 289 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 275 1.1E-73 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 PACID_23920 fe13bea23b180d15cf6b727626772abc 447 Gene3D G3DSA:3.20.20.70 146 305 2.5E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_23920 fe13bea23b180d15cf6b727626772abc 447 PIRSF PIRSF000484 1 427 5.1E-94 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 PACID_23920 fe13bea23b180d15cf6b727626772abc 447 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 4 385 1.2E-123 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 PACID_23920 fe13bea23b180d15cf6b727626772abc 447 SUPERFAMILY SSF51690 134 427 4.42E-78 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 PACID_23920 fe13bea23b180d15cf6b727626772abc 447 SUPERFAMILY SSF54675 2 132 1.0E-41 T 14-10-2018 PACID_23920 fe13bea23b180d15cf6b727626772abc 447 Gene3D G3DSA:3.20.140.10 5 371 2.5E-101 T 14-10-2018 PACID_17770 2e2c450d81262e1fca2567b52b792896 274 SUPERFAMILY SSF53223 4 97 4.14E-21 T 14-10-2018 PACID_17770 2e2c450d81262e1fca2567b52b792896 274 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 9 88 1.4E-18 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 PACID_17770 2e2c450d81262e1fca2567b52b792896 274 Gene3D G3DSA:3.40.50.720 102 244 3.9E-68 T 14-10-2018 PACID_17770 2e2c450d81262e1fca2567b52b792896 274 Gene3D G3DSA:3.40.50.10860 8 258 3.9E-68 T 14-10-2018 PACID_17770 2e2c450d81262e1fca2567b52b792896 274 SUPERFAMILY SSF51735 102 267 1.0E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30930 669f0b3735aef1e71a308f4720820722 167 Pfam PF02467 Transcription factor WhiB 18 61 8.5E-7 T 14-10-2018 IPR034768 WhiB-like iron-sulfur binding domain PACID_30930 669f0b3735aef1e71a308f4720820722 167 Gene3D G3DSA:1.10.10.10 86 134 4.3E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_30930 669f0b3735aef1e71a308f4720820722 167 Pfam PF08281 Sigma-70, region 4 107 127 4.5E-6 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 PACID_07700 09246da40d248bf26ea099695fc83acc 258 Gene3D G3DSA:1.10.3720.10 53 251 5.2E-28 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07700 09246da40d248bf26ea099695fc83acc 258 SUPERFAMILY SSF161098 60 245 7.46E-33 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07700 09246da40d248bf26ea099695fc83acc 258 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 249 4.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_18800 707d8d4c540242af9d997af68590f1cc 101 Pfam PF01402 Ribbon-helix-helix protein, copG family 66 100 5.4E-6 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 412 483 6.3E-8 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 Pfam PF02378 Phosphotransferase system, EIIC 55 312 4.6E-13 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 Gene3D G3DSA:3.40.930.10 525 663 2.0E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 527 661 6.6E-29 T 14-10-2018 IPR002178 PTS EIIA type-2 domain PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 SUPERFAMILY SSF55804 527 661 1.83E-34 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 45 378 1.5E-147 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 Gene3D G3DSA:3.40.50.2300 404 499 9.2E-25 T 14-10-2018 PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 570 586 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain PACID_14130 86ff4b0e1accdea0c07a7229487cb55e 666 SUPERFAMILY SSF52794 411 496 4.45E-17 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 PACID_33310 2dc9c638e61afea90627abf5e18d8cd6 343 Gene3D G3DSA:3.40.630.120 193 342 1.8E-33 T 14-10-2018 PACID_28700 2aba8dde3bd2ef406551bdbff2e3dcbe 615 Gene3D G3DSA:3.40.190.10 31 312 4.2E-68 T 14-10-2018 PACID_28700 2aba8dde3bd2ef406551bdbff2e3dcbe 615 PIRSF PIRSF002741 6 565 3.5E-97 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 PACID_28700 2aba8dde3bd2ef406551bdbff2e3dcbe 615 SUPERFAMILY SSF53850 49 557 6.59E-124 T 14-10-2018 PACID_28700 2aba8dde3bd2ef406551bdbff2e3dcbe 615 Gene3D G3DSA:3.10.105.10 313 532 1.8E-54 T 14-10-2018 PACID_28700 2aba8dde3bd2ef406551bdbff2e3dcbe 615 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 99 471 5.6E-85 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain PACID_17480 63b46d972ae1d15d4bc09c2a2c73fd53 238 TIGRFAM TIGR00017 cmk: cytidylate kinase 15 226 1.1E-46 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PACID_17480 63b46d972ae1d15d4bc09c2a2c73fd53 238 Hamap MF_00238 Cytidylate kinase [cmk]. 15 232 26.254 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PACID_17480 63b46d972ae1d15d4bc09c2a2c73fd53 238 Gene3D G3DSA:3.40.50.300 11 232 1.6E-64 T 14-10-2018 PACID_17480 63b46d972ae1d15d4bc09c2a2c73fd53 238 Pfam PF02224 Cytidylate kinase 17 228 1.2E-51 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 PACID_17480 63b46d972ae1d15d4bc09c2a2c73fd53 238 SUPERFAMILY SSF52540 14 228 3.96E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_31140 3c8b281f09043129b86986c66f6f445e 433 PIRSF PIRSF037420 39 417 1.6E-82 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E PACID_31140 3c8b281f09043129b86986c66f6f445e 433 SUPERFAMILY SSF102114 50 390 1.2E-55 T 14-10-2018 PACID_31140 3c8b281f09043129b86986c66f6f445e 433 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 46 413 1.9E-156 T 14-10-2018 IPR027634 Radical SAM protein, BA_1875 family PACID_31140 3c8b281f09043129b86986c66f6f445e 433 Pfam PF04055 Radical SAM superfamily 58 199 1.6E-9 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 PACID_31140 3c8b281f09043129b86986c66f6f445e 433 Gene3D G3DSA:3.20.20.70 43 370 3.1E-32 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_28070 c83944c11257d7b093f330cf18b435d2 292 Pfam PF01261 Xylose isomerase-like TIM barrel 35 226 4.1E-16 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PACID_28070 c83944c11257d7b093f330cf18b435d2 292 Gene3D G3DSA:3.20.20.150 7 276 3.9E-36 T 14-10-2018 PACID_28070 c83944c11257d7b093f330cf18b435d2 292 SUPERFAMILY SSF51658 17 255 2.49E-34 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_11860 530cc912b095c00a13e263ae491d0503 290 Gene3D G3DSA:3.60.110.10 7 268 5.0E-55 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PACID_11860 530cc912b095c00a13e263ae491d0503 290 SUPERFAMILY SSF56317 22 254 1.2E-50 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily PACID_11860 530cc912b095c00a13e263ae491d0503 290 Pfam PF00795 Carbon-nitrogen hydrolase 36 247 3.5E-22 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 PACID_23640 474fc2846a868c4619778e7f2780756b 428 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 286 393 7.0E-13 T 14-10-2018 PACID_23640 474fc2846a868c4619778e7f2780756b 428 Pfam PF03601 Conserved hypothetical protein 698 80 398 1.1E-44 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PACID_11920 dc5a9117e94b34159aca481dac668527 286 Pfam PF10708 Protein of unknown function (DUF2510) 4 33 1.1E-9 T 14-10-2018 IPR018929 Domain of unknown function DUF2510 PACID_21510 9389cb7ae557d490128e441b52c9ccdf 148 Pfam PF07883 Cupin domain 43 106 3.8E-7 T 14-10-2018 IPR013096 Cupin 2, conserved barrel PACID_21510 9389cb7ae557d490128e441b52c9ccdf 148 SUPERFAMILY SSF51182 13 137 2.82E-27 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily PACID_21510 9389cb7ae557d490128e441b52c9ccdf 148 Gene3D G3DSA:2.60.120.10 2 141 1.3E-44 T 14-10-2018 IPR014710 RmlC-like jelly roll fold PACID_28840 5f463c61f06e58997fc4c87b340a2128 271 Pfam PF07681 DoxX 138 220 7.2E-8 T 14-10-2018 IPR032808 DoxX family PACID_12190 d15b99491950ae33cc63103ece88a5ef 363 Gene3D G3DSA:3.90.1510.10 142 218 5.9E-21 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 PACID_12190 d15b99491950ae33cc63103ece88a5ef 363 Gene3D G3DSA:3.40.50.10350 219 286 5.9E-21 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold PACID_12190 d15b99491950ae33cc63103ece88a5ef 363 SUPERFAMILY SSF110738 2 290 9.42E-26 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 PACID_12190 d15b99491950ae33cc63103ece88a5ef 363 Pfam PF02595 Glycerate kinase family 142 288 4.5E-22 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 PACID_23870 d97656e652e5b3f7a7feeb8f029cedeb 111 Gene3D G3DSA:1.10.10.10 21 91 1.2E-5 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_23870 d97656e652e5b3f7a7feeb8f029cedeb 111 Pfam PF09012 FeoC like transcriptional regulator 30 84 8.4E-8 T 14-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC PACID_23870 d97656e652e5b3f7a7feeb8f029cedeb 111 SUPERFAMILY SSF46785 30 85 1.01E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_04680 489f5b1223754f996d4ebc26f1ba2624 423 Gene3D G3DSA:3.40.50.300 178 418 1.3E-36 T 14-10-2018 PACID_04680 489f5b1223754f996d4ebc26f1ba2624 423 SUPERFAMILY SSF52540 252 407 7.97E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03550 bcd8da6f1753921a6a93b8c37ae9cddf 410 Pfam PF12704 MacB-like periplasmic core domain 21 248 4.2E-40 T 14-10-2018 IPR025857 MacB-like periplasmic core domain PACID_03550 bcd8da6f1753921a6a93b8c37ae9cddf 410 Pfam PF02687 FtsX-like permease family 316 401 3.4E-8 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_27220 c41b88987ee3760df7720bf96f84e852 418 Gene3D G3DSA:1.20.1250.20 2 195 3.2E-25 T 14-10-2018 PACID_27220 c41b88987ee3760df7720bf96f84e852 418 SUPERFAMILY SSF103473 5 413 1.28E-45 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_27220 c41b88987ee3760df7720bf96f84e852 418 Pfam PF07690 Major Facilitator Superfamily 19 362 1.2E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_27220 c41b88987ee3760df7720bf96f84e852 418 Gene3D G3DSA:1.20.1250.20 209 412 8.1E-13 T 14-10-2018 PACID_15330 290cd491755a80a30e3e3d9b096bc83e 305 Gene3D G3DSA:3.40.80.10 11 207 1.1E-6 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 PACID_14820 c78f7b0dec9f819fdbb3f8b774ee36f0 352 SUPERFAMILY SSF46785 14 67 1.14E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_14820 c78f7b0dec9f819fdbb3f8b774ee36f0 352 Gene3D G3DSA:1.10.10.10 12 86 1.5E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_14820 c78f7b0dec9f819fdbb3f8b774ee36f0 352 Pfam PF13730 Helix-turn-helix domain 16 62 6.7E-12 T 14-10-2018 PACID_32140 5875c7144f32907587012e2dc0682a2f 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 310 2.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_32140 5875c7144f32907587012e2dc0682a2f 323 SUPERFAMILY SSF160964 44 74 2.75E-5 T 14-10-2018 PACID_32140 5875c7144f32907587012e2dc0682a2f 323 Gene3D G3DSA:1.10.3720.10 79 317 9.0E-70 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32140 5875c7144f32907587012e2dc0682a2f 323 SUPERFAMILY SSF161098 82 308 3.27E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30920 30131ce9535cfb06c89cc5447188b419 632 Gene3D G3DSA:1.20.1530.20 3 357 9.6E-17 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily PACID_30920 30131ce9535cfb06c89cc5447188b419 632 Pfam PF00999 Sodium/hydrogen exchanger family 9 414 3.1E-28 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 PACID_11450 828e28a708968e61522494db6554a069 283 SUPERFAMILY SSF56784 13 269 1.94E-58 T 14-10-2018 IPR036412 HAD-like superfamily PACID_11450 828e28a708968e61522494db6554a069 283 Gene3D G3DSA:3.40.50.1000 15 262 2.0E-69 T 14-10-2018 IPR023214 HAD superfamily PACID_11450 828e28a708968e61522494db6554a069 283 Pfam PF13242 HAD-hyrolase-like 193 267 5.8E-19 T 14-10-2018 PACID_11450 828e28a708968e61522494db6554a069 283 Pfam PF13344 Haloacid dehalogenase-like hydrolase 15 115 2.0E-24 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_11450 828e28a708968e61522494db6554a069 283 Gene3D G3DSA:3.40.50.1000 80 194 2.0E-69 T 14-10-2018 IPR023214 HAD superfamily PACID_11450 828e28a708968e61522494db6554a069 283 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 16 242 4.2E-33 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA PACID_19610 e776e49247cd4fba009d992481676cd2 498 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 336 469 3.3E-7 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain PACID_19610 e776e49247cd4fba009d992481676cd2 498 Pfam PF13440 Polysaccharide biosynthesis protein 48 335 7.7E-56 T 14-10-2018 PACID_05110 7dc3bb95e9acad1bcb8e4d59785ef60c 117 Pfam PF02583 Metal-sensitive transcriptional repressor 31 112 1.2E-30 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 PACID_05110 7dc3bb95e9acad1bcb8e4d59785ef60c 117 Gene3D G3DSA:1.20.58.1000 28 117 1.2E-35 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily PACID_09200 3f09f4c76aa094464b96de56ea5dd066 471 Pfam PF00860 Permease family 50 426 4.2E-26 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PACID_32580 2141564f8893efd27afc888fd8e887ce 232 SUPERFAMILY SSF52540 3 216 1.33E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_32580 2141564f8893efd27afc888fd8e887ce 232 Pfam PF00005 ABC transporter 20 156 4.6E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_32580 2141564f8893efd27afc888fd8e887ce 232 SMART SM00382 27 203 1.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_32580 2141564f8893efd27afc888fd8e887ce 232 Gene3D G3DSA:3.40.50.300 1 228 8.6E-54 T 14-10-2018 PACID_32580 2141564f8893efd27afc888fd8e887ce 232 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_22500 431bb368eddb20d49d9bb8620257092c 418 Pfam PF01458 Uncharacterized protein family (UPF0051) 159 380 8.7E-65 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 PACID_22500 431bb368eddb20d49d9bb8620257092c 418 SUPERFAMILY SSF101960 49 406 1.31E-78 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily PACID_03230 111baea72e0f435b5d85cca2908534f3 617 Pfam PF03235 Protein of unknown function DUF262 5 243 6.1E-30 T 14-10-2018 IPR004919 Domain of unknown function DUF262 PACID_29090 5e064ef1b4b2bf06fcab5e10fe894c96 160 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 8 132 1.4E-25 T 14-10-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III PACID_06980 59d54a512c880ac61f68cdff9922e7ec 348 Pfam PF05175 Methyltransferase small domain 171 343 1.0E-47 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 PACID_06980 59d54a512c880ac61f68cdff9922e7ec 348 Gene3D G3DSA:3.40.50.150 158 347 7.6E-47 T 14-10-2018 PACID_06980 59d54a512c880ac61f68cdff9922e7ec 348 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 276 282 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 PACID_06980 59d54a512c880ac61f68cdff9922e7ec 348 Gene3D G3DSA:3.40.50.150 2 148 3.9E-19 T 14-10-2018 PACID_06980 59d54a512c880ac61f68cdff9922e7ec 348 SUPERFAMILY SSF53335 204 319 1.14E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_03340 1809b31ffec8a6135aa673c8a92c005f 243 SUPERFAMILY SSF55961 63 237 4.71E-9 T 14-10-2018 PACID_03340 1809b31ffec8a6135aa673c8a92c005f 243 Gene3D G3DSA:3.30.530.20 65 239 1.0E-6 T 14-10-2018 IPR023393 START-like domain superfamily PACID_28080 c0baf71c9f9444c1054d67d91c18fcd8 212 Gene3D G3DSA:3.10.180.10 1 152 8.7E-11 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_28080 c0baf71c9f9444c1054d67d91c18fcd8 212 Pfam PF13468 Glyoxalase-like domain 4 174 1.9E-31 T 14-10-2018 IPR025870 Glyoxalase-like domain PACID_07340 36c35f1ff7ab43f44edf1c59100c6745 301 Gene3D G3DSA:1.10.3720.10 34 293 8.7E-61 T 14-10-2018 IPR035906 MetI-like superfamily PACID_07340 36c35f1ff7ab43f44edf1c59100c6745 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 295 1.1E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_07340 36c35f1ff7ab43f44edf1c59100c6745 301 SUPERFAMILY SSF161098 31 301 7.85E-64 T 14-10-2018 IPR035906 MetI-like superfamily PACID_09800 feafce2a21a14c282b449ae6aa1e10ed 553 Pfam PF09818 Predicted ATPase of the ABC class 5 421 3.0E-172 T 14-10-2018 IPR019195 ABC transporter, ATPase, putative PACID_09800 feafce2a21a14c282b449ae6aa1e10ed 553 SUPERFAMILY SSF52540 232 405 9.18E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_09800 feafce2a21a14c282b449ae6aa1e10ed 553 Gene3D G3DSA:3.40.50.300 218 430 8.9E-8 T 14-10-2018 PACID_09760 2b700530954fdd9a0e5424b2096691c6 324 Gene3D G3DSA:3.40.50.1820 3 315 5.5E-79 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_09760 2b700530954fdd9a0e5424b2096691c6 324 Pfam PF07859 alpha/beta hydrolase fold 83 295 4.5E-64 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 PACID_09760 2b700530954fdd9a0e5424b2096691c6 324 SUPERFAMILY SSF53474 31 317 1.06E-63 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_21880 13087afe1eaf64f7beaae2cdd3b6d469 264 Pfam PF01925 Sulfite exporter TauE/SafE 16 255 2.1E-38 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PACID_00910 d365c55bd1b0058b5391e1cd7c01212c 100 Gene3D G3DSA:3.40.50.2300 5 94 2.5E-25 T 14-10-2018 PACID_00910 d365c55bd1b0058b5391e1cd7c01212c 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 80 4.3E-13 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 PACID_00910 d365c55bd1b0058b5391e1cd7c01212c 100 SUPERFAMILY SSF52794 5 91 1.44E-18 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 Gene3D G3DSA:3.30.465.10 333 416 6.8E-18 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 Pfam PF01595 Domain of unknown function DUF21 12 187 7.8E-29 T 14-10-2018 IPR002550 CNNM, transmembrane domain PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 Pfam PF03471 Transporter associated domain 342 409 2.6E-11 T 14-10-2018 IPR005170 Transporter-associated domain PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 SUPERFAMILY SSF56176 342 430 2.34E-14 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 SUPERFAMILY SSF54631 198 340 1.39E-31 T 14-10-2018 PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 SMART SM01091 341 421 3.9E-15 T 14-10-2018 IPR005170 Transporter-associated domain PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 SMART SM00116 278 326 27.0 T 14-10-2018 IPR000644 CBS domain PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 SMART SM00116 212 261 7.0E-5 T 14-10-2018 IPR000644 CBS domain PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 Gene3D G3DSA:3.10.580.10 183 332 8.2E-52 T 14-10-2018 PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 Pfam PF00571 CBS domain 208 260 6.4E-6 T 14-10-2018 IPR000644 CBS domain PACID_14340 ba65d0b9a8dd6431e16e8a91c49352e3 432 Pfam PF00571 CBS domain 272 326 0.0013 T 14-10-2018 IPR000644 CBS domain PACID_30120 10d0b99c352ef2538f9b9fe0013531b2 274 Pfam PF00106 short chain dehydrogenase 31 209 1.1E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30120 10d0b99c352ef2538f9b9fe0013531b2 274 Gene3D G3DSA:3.40.50.720 32 261 2.5E-55 T 14-10-2018 PACID_30120 10d0b99c352ef2538f9b9fe0013531b2 274 SUPERFAMILY SSF51735 30 250 4.15E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30120 10d0b99c352ef2538f9b9fe0013531b2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 9.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30120 10d0b99c352ef2538f9b9fe0013531b2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 99 110 9.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30120 10d0b99c352ef2538f9b9fe0013531b2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 31 48 9.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30120 10d0b99c352ef2538f9b9fe0013531b2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 163 9.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_30120 10d0b99c352ef2538f9b9fe0013531b2 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 9.8E-18 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_33880 446409ed145e44160b393b0732ecc00c 324 Gene3D G3DSA:3.30.2350.10 96 316 4.5E-41 T 14-10-2018 PACID_33880 446409ed145e44160b393b0732ecc00c 324 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 152 166 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_33880 446409ed145e44160b393b0732ecc00c 324 Pfam PF00849 RNA pseudouridylate synthase 114 265 4.7E-20 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_33880 446409ed145e44160b393b0732ecc00c 324 SUPERFAMILY SSF55120 99 317 9.6E-47 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 PACID_03670 65c742a46b3e514595d743c5e6b2c69d 388 SUPERFAMILY SSF53613 17 239 2.66E-34 T 14-10-2018 IPR029056 Ribokinase-like PACID_03670 65c742a46b3e514595d743c5e6b2c69d 388 Gene3D G3DSA:3.40.1190.20 16 242 2.3E-67 T 14-10-2018 IPR029056 Ribokinase-like PACID_03670 65c742a46b3e514595d743c5e6b2c69d 388 Pfam PF00294 pfkB family carbohydrate kinase 35 232 2.5E-10 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB PACID_05460 3d97732fb80ecc767b00d4ade03ebf03 225 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 7.3E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_05460 3d97732fb80ecc767b00d4ade03ebf03 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_05460 3d97732fb80ecc767b00d4ade03ebf03 225 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 2.4E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_05460 3d97732fb80ecc767b00d4ade03ebf03 225 SUPERFAMILY SSF46689 3 68 6.48E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_05460 3d97732fb80ecc767b00d4ade03ebf03 225 Gene3D G3DSA:1.10.357.10 2 205 8.3E-23 T 14-10-2018 PACID_05460 3d97732fb80ecc767b00d4ade03ebf03 225 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site PACID_20760 76f119ab63cbfa6697e26970874f1bb9 330 Pfam PF13280 WYL domain 147 319 1.2E-22 T 14-10-2018 IPR026881 WYL domain PACID_27520 3440681daaf50081c6466633727aa8be 177 Pfam PF13173 AAA domain 22 138 1.4E-22 T 14-10-2018 PACID_27520 3440681daaf50081c6466633727aa8be 177 SUPERFAMILY SSF52540 7 143 1.3E-11 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_13470 3479d350574cde921ca4eebf2b59153a 211 Pfam PF01810 LysE type translocator 15 203 1.4E-18 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 PACID_25190 242d3bd9bfd450d43cb5bb2dce29a9fb 541 SUPERFAMILY SSF103473 6 428 1.13E-46 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_25190 242d3bd9bfd450d43cb5bb2dce29a9fb 541 Pfam PF07690 Major Facilitator Superfamily 7 420 3.6E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_25190 242d3bd9bfd450d43cb5bb2dce29a9fb 541 Gene3D G3DSA:1.20.1720.10 5 223 6.1E-26 T 14-10-2018 PACID_25190 242d3bd9bfd450d43cb5bb2dce29a9fb 541 Gene3D G3DSA:1.20.1250.20 259 449 1.0E-18 T 14-10-2018 PACID_31970 1333ca3af8be830c05c1bdf2be7640de 384 Gene3D G3DSA:3.30.420.40 74 200 1.9E-12 T 14-10-2018 PACID_31970 1333ca3af8be830c05c1bdf2be7640de 384 Gene3D G3DSA:3.30.420.40 201 349 1.8E-17 T 14-10-2018 PACID_31970 1333ca3af8be830c05c1bdf2be7640de 384 Pfam PF00480 ROK family 136 366 1.3E-9 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PACID_31970 1333ca3af8be830c05c1bdf2be7640de 384 Gene3D G3DSA:1.10.10.10 1 69 2.7E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_31970 1333ca3af8be830c05c1bdf2be7640de 384 SUPERFAMILY SSF53067 75 374 3.29E-24 T 14-10-2018 PACID_31970 1333ca3af8be830c05c1bdf2be7640de 384 SUPERFAMILY SSF46785 1 64 2.84E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily PACID_30330 4febe45a141761f91e60289b7080802d 358 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 215 1.3E-8 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 PACID_30330 4febe45a141761f91e60289b7080802d 358 SUPERFAMILY SSF51735 8 152 2.66E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_30330 4febe45a141761f91e60289b7080802d 358 Gene3D G3DSA:3.40.50.720 7 127 3.3E-22 T 14-10-2018 PACID_30330 4febe45a141761f91e60289b7080802d 358 SUPERFAMILY SSF55347 131 257 1.0E-20 T 14-10-2018 PACID_30330 4febe45a141761f91e60289b7080802d 358 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 122 1.5E-14 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 PACID_30330 4febe45a141761f91e60289b7080802d 358 Gene3D G3DSA:3.30.360.10 128 342 1.7E-40 T 14-10-2018 PACID_32680 1d5dade69173e2bbc11cce7cd2ffa3b7 378 Pfam PF07730 Histidine kinase 172 236 2.4E-7 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_32680 1d5dade69173e2bbc11cce7cd2ffa3b7 378 Gene3D G3DSA:3.30.565.10 245 370 7.9E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_28820 4a31204b4d6576bf965c2daa77fdbee2 557 Pfam PF00561 alpha/beta hydrolase fold 159 529 4.0E-31 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_28820 4a31204b4d6576bf965c2daa77fdbee2 557 SUPERFAMILY SSF53474 156 545 1.21E-22 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_23480 58789f336e898e8366a8a5c4fe8d99cc 168 Gene3D G3DSA:3.40.50.150 69 154 1.1E-14 T 14-10-2018 PACID_23480 58789f336e898e8366a8a5c4fe8d99cc 168 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 86 135 8.0E-5 T 14-10-2018 PACID_23480 58789f336e898e8366a8a5c4fe8d99cc 168 SUPERFAMILY SSF53335 79 134 1.66E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_29810 2f81f54829d6968e5e7e674d2a06778a 660 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 26 660 30.939 T 14-10-2018 IPR023051 Potassium uptake protein, low affinity, Kup PACID_29810 2f81f54829d6968e5e7e674d2a06778a 660 Pfam PF02705 K+ potassium transporter 35 571 3.2E-201 T 14-10-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 PACID_11980 f504fbc3ef3028efb104f28efaddc075 338 Pfam PF02698 DUF218 domain 164 307 1.1E-28 T 14-10-2018 IPR003848 Domain of unknown function DUF218 PACID_22870 b1bf783d008796d43a1378c8c8b3cfe3 251 Pfam PF13276 HTH-like domain 6 57 2.3E-12 T 14-10-2018 IPR025948 HTH-like domain PACID_22870 b1bf783d008796d43a1378c8c8b3cfe3 251 Pfam PF00665 Integrase core domain 83 198 5.9E-29 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_22870 b1bf783d008796d43a1378c8c8b3cfe3 251 SUPERFAMILY SSF53098 77 239 9.71E-38 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_22870 b1bf783d008796d43a1378c8c8b3cfe3 251 Gene3D G3DSA:3.30.420.10 81 240 9.3E-13 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_28550 122ed9690c1f21fe369bb210554922e8 332 Gene3D G3DSA:3.40.50.1820 1 332 6.0E-66 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_28550 122ed9690c1f21fe369bb210554922e8 332 SUPERFAMILY SSF53474 3 317 1.24E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_28550 122ed9690c1f21fe369bb210554922e8 332 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 325 5.6E-73 T 14-10-2018 IPR008391 Acetyl xylan esterase PACID_03060 8f6f021bf051b5ee81cfb3342e269670 311 Gene3D G3DSA:3.20.10.10 148 310 1.1E-51 T 14-10-2018 PACID_03060 8f6f021bf051b5ee81cfb3342e269670 311 SUPERFAMILY SSF56752 46 302 9.42E-51 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 PACID_03060 8f6f021bf051b5ee81cfb3342e269670 311 Pfam PF01063 Amino-transferase class IV 62 287 5.2E-41 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 PACID_03060 8f6f021bf051b5ee81cfb3342e269670 311 Gene3D G3DSA:3.30.470.10 24 142 1.7E-32 T 14-10-2018 PACID_00610 f39b3ac425b565033b8b006d94d3c8b7 335 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 50 180 2.9E-58 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 PACID_00610 f39b3ac425b565033b8b006d94d3c8b7 335 SUPERFAMILY SSF52540 17 307 1.09E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_00610 f39b3ac425b565033b8b006d94d3c8b7 335 Gene3D G3DSA:1.10.8.300 216 332 6.7E-35 T 14-10-2018 PACID_00610 f39b3ac425b565033b8b006d94d3c8b7 335 Gene3D G3DSA:3.40.50.300 10 208 1.8E-43 T 14-10-2018 PACID_00610 f39b3ac425b565033b8b006d94d3c8b7 335 PIRSF PIRSF002849 1 335 4.1E-121 T 14-10-2018 PACID_17400 dd266dfe6e8f6343dfe80cbb7f3f1d2a 450 Pfam PF00872 Transposase, Mutator family 45 415 1.3E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_25740 c1b73d40a0b24f57c9670b6f8c40f8c0 102 Gene3D G3DSA:3.30.70.330 9 100 2.0E-33 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily PACID_25740 c1b73d40a0b24f57c9670b6f8c40f8c0 102 Pfam PF00276 Ribosomal protein L23 11 96 3.0E-32 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PACID_25740 c1b73d40a0b24f57c9670b6f8c40f8c0 102 SUPERFAMILY SSF54189 7 99 8.63E-33 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_25740 c1b73d40a0b24f57c9670b6f8c40f8c0 102 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 10 99 22.423 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 Gene3D G3DSA:3.30.479.30 51 182 3.0E-46 T 14-10-2018 PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 Pfam PF01145 SPFH domain / Band 7 family 27 196 3.8E-34 T 14-10-2018 IPR001107 Band 7 domain PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 SMART SM00244 23 180 6.1E-55 T 14-10-2018 IPR001107 Band 7 domain PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 SUPERFAMILY SSF117892 54 187 1.11E-38 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 PRINTS PR00721 Stomatin signature 112 129 1.8E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 PRINTS PR00721 Stomatin signature 77 98 1.8E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 PRINTS PR00721 Stomatin signature 156 174 1.8E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 PRINTS PR00721 Stomatin signature 175 196 1.8E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 PRINTS PR00721 Stomatin signature 132 155 1.8E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 PRINTS PR00721 Stomatin signature 200 223 1.8E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_27190 7bffbf8293263ac69778d9c4a7e6a3ec 258 PRINTS PR00721 Stomatin signature 30 52 1.8E-63 T 14-10-2018 IPR001972 Stomatin family GO:0016020 PACID_05720 6638712a96a0e6f341e2b0c458a8efca 165 SMART SM00240 87 138 1.9E-11 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_05720 6638712a96a0e6f341e2b0c458a8efca 165 Pfam PF00498 FHA domain 89 153 8.4E-19 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_05720 6638712a96a0e6f341e2b0c458a8efca 165 Gene3D G3DSA:2.60.200.20 41 162 9.5E-26 T 14-10-2018 PACID_05720 6638712a96a0e6f341e2b0c458a8efca 165 SUPERFAMILY SSF49879 46 159 1.03E-26 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 PACID_31560 5d2e0c21d94a3a22f3ce449374e9a68f 539 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 62 350 4.5E-37 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal PACID_31560 5d2e0c21d94a3a22f3ce449374e9a68f 539 Gene3D G3DSA:2.60.120.560 363 536 5.2E-30 T 14-10-2018 PACID_31560 5d2e0c21d94a3a22f3ce449374e9a68f 539 SUPERFAMILY SSF75005 44 351 3.77E-54 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PACID_31560 5d2e0c21d94a3a22f3ce449374e9a68f 539 Gene3D G3DSA:2.115.10.20 12 362 6.3E-65 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily PACID_31560 5d2e0c21d94a3a22f3ce449374e9a68f 539 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 357 527 3.1E-23 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal PACID_31560 5d2e0c21d94a3a22f3ce449374e9a68f 539 SMART SM00640 61 495 1.1E-36 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 PACID_31560 5d2e0c21d94a3a22f3ce449374e9a68f 539 SUPERFAMILY SSF49899 350 532 3.88E-20 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily PACID_14010 80c483ec16c951b25d8ff05eb9831616 286 Gene3D G3DSA:1.10.3720.10 10 278 6.5E-60 T 14-10-2018 IPR035906 MetI-like superfamily PACID_14010 80c483ec16c951b25d8ff05eb9831616 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 281 6.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_14010 80c483ec16c951b25d8ff05eb9831616 286 SUPERFAMILY SSF161098 15 284 3.14E-61 T 14-10-2018 IPR035906 MetI-like superfamily PACID_24820 72eecbbcba67ccf9a7695ac7b514fadd 464 SUPERFAMILY SSF55874 351 461 1.15E-13 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_24820 72eecbbcba67ccf9a7695ac7b514fadd 464 Gene3D G3DSA:3.30.565.10 323 463 9.2E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_24820 72eecbbcba67ccf9a7695ac7b514fadd 464 Pfam PF04024 PspC domain 46 102 1.9E-15 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal PACID_09810 97b179e38d215fa34550ddc78acb0eb1 249 Pfam PF03746 LamB/YcsF family 1 238 9.4E-99 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PACID_09810 97b179e38d215fa34550ddc78acb0eb1 249 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 243 41.347 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 PACID_09810 97b179e38d215fa34550ddc78acb0eb1 249 Gene3D G3DSA:3.20.20.370 1 248 2.9E-98 T 14-10-2018 PACID_09810 97b179e38d215fa34550ddc78acb0eb1 249 SUPERFAMILY SSF88713 1 247 9.64E-94 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PACID_19240 18188effc59b24e22da2d6bec4753eb0 175 Pfam PF03703 Bacterial PH domain 85 140 1.3E-8 T 14-10-2018 IPR005182 Domain of unknown function DUF304 PACID_11550 3fd68f63eb42188eae9bf71294db388d 430 Pfam PF05977 Transmembrane secretion effector 12 398 3.7E-55 T 14-10-2018 IPR010290 Transmembrane secretion effector PACID_11550 3fd68f63eb42188eae9bf71294db388d 430 SUPERFAMILY SSF103473 20 405 2.49E-47 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_11550 3fd68f63eb42188eae9bf71294db388d 430 Gene3D G3DSA:1.20.1250.20 13 396 2.7E-39 T 14-10-2018 PACID_32470 6ccfa750b637ec36bb2df06731862be7 388 Pfam PF02388 FemAB family 27 265 1.4E-32 T 14-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 PACID_32470 6ccfa750b637ec36bb2df06731862be7 388 Pfam PF02388 FemAB family 282 379 5.2E-15 T 14-10-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 PACID_32470 6ccfa750b637ec36bb2df06731862be7 388 SUPERFAMILY SSF55729 5 186 2.07E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_32470 6ccfa750b637ec36bb2df06731862be7 388 Gene3D G3DSA:3.40.630.30 24 155 7.3E-20 T 14-10-2018 PACID_32470 6ccfa750b637ec36bb2df06731862be7 388 Gene3D G3DSA:3.40.630.30 189 365 4.0E-49 T 14-10-2018 PACID_32470 6ccfa750b637ec36bb2df06731862be7 388 SUPERFAMILY SSF55729 198 379 3.72E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_21490 300949eabaeef2cb5a7af254c87b7199 124 Pfam PF10012 Uncharacterized protein conserved in bacteria (DUF2255) 9 120 1.2E-42 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 PACID_21490 300949eabaeef2cb5a7af254c87b7199 124 PIRSF PIRSF028498 1 124 3.4E-52 T 14-10-2018 IPR016888 Uncharacterised conserved protein UCP028498 PACID_23070 c3a4a97d868b7c2fa050c7c333440e4c 156 Gene3D G3DSA:3.40.1400.10 5 155 2.0E-54 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_23070 c3a4a97d868b7c2fa050c7c333440e4c 156 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 8 152 1.4E-46 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_23070 c3a4a97d868b7c2fa050c7c333440e4c 156 SUPERFAMILY SSF89623 7 153 4.58E-49 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_23070 c3a4a97d868b7c2fa050c7c333440e4c 156 TIGRFAM TIGR02133 RPI_actino: ribose 5-phosphate isomerase 7 152 1.6E-56 T 14-10-2018 IPR011860 Ribose 5-phosphate isomerase GO:0004751 PACID_23070 c3a4a97d868b7c2fa050c7c333440e4c 156 PIRSF PIRSF005384 6 154 1.0E-46 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_23070 c3a4a97d868b7c2fa050c7c333440e4c 156 Pfam PF02502 Ribose/Galactose Isomerase 8 147 9.8E-45 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 PACID_30620 6e0f78a3aea3464559e4b164c4ef6763 474 Pfam PF13440 Polysaccharide biosynthesis protein 75 365 1.2E-8 T 14-10-2018 PACID_20830 38b96868514bf0fc35ec57c7528b3fa1 238 SUPERFAMILY SSF55811 12 187 4.87E-34 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_20830 38b96868514bf0fc35ec57c7528b3fa1 238 Gene3D G3DSA:3.90.79.10 8 212 6.7E-46 T 14-10-2018 PACID_20830 38b96868514bf0fc35ec57c7528b3fa1 238 Pfam PF00293 NUDIX domain 49 166 4.0E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_01480 f953bbbffbc70814889153763e21d9f2 100 SUPERFAMILY SSF47413 36 93 2.62E-7 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_01480 f953bbbffbc70814889153763e21d9f2 100 TIGRFAM TIGR02684 dnstrm_HI1420: probable addiction module antidote protein 8 94 9.2E-27 T 14-10-2018 IPR014057 Uncharacterized protein HI1420 PACID_30030 f8ef3aaec99c2ef63a88a04979012b6d 763 Pfam PF13692 Glycosyl transferases group 1 578 708 5.1E-7 T 14-10-2018 PACID_30030 f8ef3aaec99c2ef63a88a04979012b6d 763 Pfam PF05653 Magnesium transporter NIPA 70 117 5.5E-7 T 14-10-2018 IPR008521 Magnesium transporter NIPA GO:0015095|GO:0015693|GO:0016021 Reactome: R-HSA-5223345 PACID_30030 f8ef3aaec99c2ef63a88a04979012b6d 763 Pfam PF13439 Glycosyltransferase Family 4 370 561 5.9E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_30030 f8ef3aaec99c2ef63a88a04979012b6d 763 SUPERFAMILY SSF53756 357 745 7.33E-37 T 14-10-2018 PACID_30030 f8ef3aaec99c2ef63a88a04979012b6d 763 Gene3D G3DSA:3.40.50.2000 572 729 4.5E-9 T 14-10-2018 PACID_26730 343e396bd765b486b0819ac877a1c5d0 422 Pfam PF00872 Transposase, Mutator family 19 389 8.6E-128 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_29350 9ef453f690abe3cba74ce35892f0018b 374 Pfam PF10092 Uncharacterized protein conserved in bacteria (DUF2330) 50 265 2.2E-46 T 14-10-2018 IPR019283 Protein of unknown function DUF2330 PACID_13090 ca5915f8a4e6f48c8f7eb89587a2b68f 330 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 319 5.6E-96 T 14-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 PACID_13090 ca5915f8a4e6f48c8f7eb89587a2b68f 330 Pfam PF03741 Integral membrane protein TerC family 69 276 4.1E-46 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 PACID_10850 6343756785cd4000841c39f971d5b25f 113 SUPERFAMILY SSF48452 2 88 2.78E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_10850 6343756785cd4000841c39f971d5b25f 113 Gene3D G3DSA:1.25.40.10 4 106 2.4E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_10850 6343756785cd4000841c39f971d5b25f 113 Pfam PF12688 Tetratrico peptide repeat 2 108 1.5E-26 T 14-10-2018 PACID_33840 d66480b391bfc89369b6390ea8470a47 343 Gene3D G3DSA:3.40.50.2300 160 290 6.8E-76 T 14-10-2018 PACID_33840 d66480b391bfc89369b6390ea8470a47 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 4.7E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_33840 d66480b391bfc89369b6390ea8470a47 343 Gene3D G3DSA:3.40.50.2300 57 307 6.8E-76 T 14-10-2018 PACID_33840 d66480b391bfc89369b6390ea8470a47 343 SUPERFAMILY SSF47413 3 60 1.64E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_33840 d66480b391bfc89369b6390ea8470a47 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 PACID_33840 d66480b391bfc89369b6390ea8470a47 343 SUPERFAMILY SSF53822 63 336 1.04E-65 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_33840 d66480b391bfc89369b6390ea8470a47 343 Gene3D G3DSA:1.10.260.40 1 56 1.0E-23 T 14-10-2018 PACID_33840 d66480b391bfc89369b6390ea8470a47 343 Pfam PF13377 Periplasmic binding protein-like domain 168 334 1.1E-38 T 14-10-2018 PACID_33840 d66480b391bfc89369b6390ea8470a47 343 SMART SM00354 2 72 3.4E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 PACID_08890 92e63f5b77e7bbabfa0de0d5d77e1906 267 Pfam PF02361 Cobalt transport protein 14 228 2.3E-30 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component PACID_08890 92e63f5b77e7bbabfa0de0d5d77e1906 267 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 21 224 2.8E-46 T 14-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 PACID_05730 14991c04a5cdf8bb4c80505c601406dc 232 Gene3D G3DSA:2.60.200.20 137 229 3.3E-22 T 14-10-2018 PACID_05730 14991c04a5cdf8bb4c80505c601406dc 232 Gene3D G3DSA:3.30.2320.60 1 127 3.7E-39 T 14-10-2018 PACID_05730 14991c04a5cdf8bb4c80505c601406dc 232 Pfam PF12401 Protein of unknown function (DUF2662) 4 118 3.3E-38 T 14-10-2018 IPR022128 Domain of unknown function DUF3662 PACID_05730 14991c04a5cdf8bb4c80505c601406dc 232 Pfam PF00498 FHA domain 154 220 4.1E-16 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_05730 14991c04a5cdf8bb4c80505c601406dc 232 SUPERFAMILY SSF49879 132 227 1.76E-24 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 PACID_05730 14991c04a5cdf8bb4c80505c601406dc 232 SMART SM00240 152 206 2.7E-13 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 PACID_34090 311983cb7634e1478ebbfec102c44c93 163 SUPERFAMILY SSF103473 33 162 1.44E-27 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_34090 311983cb7634e1478ebbfec102c44c93 163 Gene3D G3DSA:1.20.1250.20 36 163 1.3E-32 T 14-10-2018 PACID_34090 311983cb7634e1478ebbfec102c44c93 163 ProSitePatterns PS00216 Sugar transport proteins signature 1. 105 122 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_34090 311983cb7634e1478ebbfec102c44c93 163 Pfam PF00083 Sugar (and other) transporter 47 163 1.5E-26 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 PACID_34090 311983cb7634e1478ebbfec102c44c93 163 PRINTS PR00171 Sugar transporter signature 142 161 1.6E-7 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_34090 311983cb7634e1478ebbfec102c44c93 163 PRINTS PR00171 Sugar transporter signature 54 64 1.6E-7 T 14-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 PACID_01960 8183b3d692914c0c500ba30d921ce474 765 Pfam PF12698 ABC-2 family transporter protein 24 748 3.8E-12 T 14-10-2018 PACID_01960 8183b3d692914c0c500ba30d921ce474 765 SUPERFAMILY SSF101967 448 537 3.27E-5 T 14-10-2018 PACID_01960 8183b3d692914c0c500ba30d921ce474 765 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 20 181 2.3E-33 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal PACID_00160 43d6f6191d3550eadb0514466e1de067 324 Pfam PF02653 Branched-chain amino acid transport system / permease component 49 312 3.1E-50 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_06680 e2681842e1ed6212edcc4f8f51b0f9ce 374 Pfam PF03631 Virulence factor BrkB 63 315 4.2E-21 T 14-10-2018 IPR017039 Virulence factor BrkB PACID_19820 bf019a6d2bafb304a7336fe3020a3159 85 TIGRFAM TIGR02949 anti_SigH_actin: anti-sigma factor, TIGR02949 family 11 80 6.7E-23 T 14-10-2018 IPR014295 Anti-sigma factor PACID_19820 bf019a6d2bafb304a7336fe3020a3159 85 Pfam PF13490 Putative zinc-finger 14 47 2.0E-8 T 14-10-2018 IPR027383 Putative zinc-finger PACID_21720 91def776f7958e6767a4b9323f4d99c0 111 Pfam PF01934 Protein of unknown function DUF86 17 101 5.6E-9 T 14-10-2018 IPR008201 Protein of unknown function DUF86 PACID_31090 497648bf430426eb9b92c0bee41f2d07 376 Pfam PF14110 Domain of unknown function (DUF4282) 289 370 8.4E-20 T 14-10-2018 IPR025557 Protein of unknown function DUF4282 PACID_32380 a44edef90c19659fe1bafa0da69a4332 309 Pfam PF03239 Iron permease FTR1 family 3 261 1.1E-47 T 14-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 PACID_22940 fec06b028537777d206459a755358a65 454 Pfam PF00872 Transposase, Mutator family 44 415 1.4E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_14220 5f1f4143bf882e809ef1afdf2af0b4db 407 Pfam PF12698 ABC-2 family transporter protein 37 378 7.7E-38 T 14-10-2018 PACID_08280 dc1b64536d216e1acf83eabe4e4cbce7 232 Gene3D G3DSA:3.20.20.70 5 226 7.0E-63 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 PACID_08280 dc1b64536d216e1acf83eabe4e4cbce7 232 SUPERFAMILY SSF51351 5 214 1.44E-32 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 PACID_19040 699bdf9e9ab7d6c0986fec76bbe1897a 255 Gene3D G3DSA:1.10.3720.10 45 245 1.5E-16 T 14-10-2018 IPR035906 MetI-like superfamily PACID_19040 699bdf9e9ab7d6c0986fec76bbe1897a 255 SUPERFAMILY SSF161098 52 231 1.3E-22 T 14-10-2018 IPR035906 MetI-like superfamily PACID_19040 699bdf9e9ab7d6c0986fec76bbe1897a 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 245 1.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_02020 abfcda51a5556a4ef4705ccebaf2205e 405 Gene3D G3DSA:1.20.1720.10 21 398 1.6E-91 T 14-10-2018 PACID_02020 abfcda51a5556a4ef4705ccebaf2205e 405 ProSitePatterns PS00216 Sugar transport proteins signature 1. 75 92 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 PACID_02020 abfcda51a5556a4ef4705ccebaf2205e 405 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 21 399 8.0E-78 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 PACID_02020 abfcda51a5556a4ef4705ccebaf2205e 405 Pfam PF07690 Major Facilitator Superfamily 26 366 6.6E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_02020 abfcda51a5556a4ef4705ccebaf2205e 405 SUPERFAMILY SSF103473 10 392 5.49E-57 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_22680 fb3aac155d0e6a528d3a218568198f53 339 Pfam PF10128 Glucose-6-phosphate dehydrogenase subunit 52 291 5.0E-73 T 14-10-2018 IPR004555 Glucose-6-phosphate dehydrogenase assembly protein OpcA PACID_27850 f3afd042e998bbfd22b608506750246d 242 Pfam PF17197 Domain of unknown function (DUF5134) 50 226 2.0E-9 T 14-10-2018 IPR033458 Protein of unknown function DUF5134 PACID_27850 f3afd042e998bbfd22b608506750246d 242 ProDom PD338207 MEMBRANE INTEGRAL TRANSMEMBRANE PLASMID PROBABLE MB0995 RV0970/MT0998 17 120 6.0E-13 T 14-10-2018 PACID_10210 9c8f43e63ead7812b13dceeb4dd21b8a 537 Pfam PF10101 Predicted membrane protein (DUF2339) 332 517 1.1E-8 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane PACID_10210 9c8f43e63ead7812b13dceeb4dd21b8a 537 Pfam PF10101 Predicted membrane protein (DUF2339) 2 340 4.1E-17 T 14-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane PACID_24430 e195d85ed74debf942d23f6fdb4187b7 200 SUPERFAMILY SSF52540 5 147 9.5E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_24430 e195d85ed74debf942d23f6fdb4187b7 200 Gene3D G3DSA:3.40.50.300 4 159 1.4E-21 T 14-10-2018 PACID_24430 e195d85ed74debf942d23f6fdb4187b7 200 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 8 145 2.4E-7 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 PACID_02960 c8c93d7dd87bf7c942e07e986752fc88 505 Pfam PF03577 Peptidase family C69 3 431 4.8E-176 T 14-10-2018 IPR005322 Peptidase C69, dipeptidase A GO:0006508|GO:0016805 PACID_23460 6019de569b956aff0f9c726e9043e9a0 156 Pfam PF04073 Aminoacyl-tRNA editing domain 24 140 2.4E-25 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PACID_23460 6019de569b956aff0f9c726e9043e9a0 156 SUPERFAMILY SSF55826 5 151 4.45E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_23460 6019de569b956aff0f9c726e9043e9a0 156 Gene3D G3DSA:3.90.960.10 1 154 4.1E-43 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_04400 04a37226b341c7775ec8e623e46a4aa1 130 Gene3D G3DSA:3.10.180.10 4 128 1.3E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_04400 04a37226b341c7775ec8e623e46a4aa1 130 SUPERFAMILY SSF54593 12 123 3.16E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_22510 eaed02de33017e184d77accf136e063d 492 Pfam PF01458 Uncharacterized protein family (UPF0051) 238 463 4.3E-74 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 PACID_22510 eaed02de33017e184d77accf136e063d 492 SUPERFAMILY SSF101960 58 489 4.97E-139 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily PACID_22510 eaed02de33017e184d77accf136e063d 492 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 37 483 3.2E-222 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 PACID_03320 7c27979d21f1fec41237c1ca0914e89c 454 Pfam PF00872 Transposase, Mutator family 45 415 1.3E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_09990 5396095354e22cc6c67702aee98c92a6 218 Gene3D G3DSA:1.10.287.1080 5 123 3.6E-40 T 14-10-2018 PACID_09990 5396095354e22cc6c67702aee98c92a6 218 SUPERFAMILY SSF101386 6 104 1.03E-23 T 14-10-2018 PACID_09990 5396095354e22cc6c67702aee98c92a6 218 Gene3D G3DSA:1.10.287.1080 158 214 3.9E-5 T 14-10-2018 PACID_09990 5396095354e22cc6c67702aee98c92a6 218 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 4.7E-27 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core PACID_01930 e69e5cfea342f383620428668e543d05 203 SUPERFAMILY SSF46689 2 73 6.98E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_01930 e69e5cfea342f383620428668e543d05 203 Gene3D G3DSA:1.10.357.10 2 203 1.7E-28 T 14-10-2018 PACID_01930 e69e5cfea342f383620428668e543d05 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 58 1.2E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_01930 e69e5cfea342f383620428668e543d05 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 4.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_01930 e69e5cfea342f383620428668e543d05 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 4.6E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_28590 5f91b79c27ec4b59fb1218ecd4131fcc 433 ProSitePatterns PS01219 Ammonium transporters signature. 138 163 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 PACID_28590 5f91b79c27ec4b59fb1218ecd4131fcc 433 TIGRFAM TIGR00836 amt: ammonium transporter 1 391 2.3E-122 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 PACID_28590 5f91b79c27ec4b59fb1218ecd4131fcc 433 SUPERFAMILY SSF111352 1 372 2.48E-108 T 14-10-2018 PACID_28590 5f91b79c27ec4b59fb1218ecd4131fcc 433 Gene3D G3DSA:1.10.3430.10 1 399 8.3E-123 T 14-10-2018 IPR029020 Ammonium/urea transporter PACID_28590 5f91b79c27ec4b59fb1218ecd4131fcc 433 Pfam PF00909 Ammonium Transporter Family 1 391 1.2E-114 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 PACID_11750 ad671cda7c26a75b05c75aa69c2c394d 144 Pfam PF02416 mttA/Hcf106 family 5 32 2.5E-5 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 PACID_26130 7e50a9bf2589afba2a9cb1dfc3f4605c 167 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 14 153 5.4E-16 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26130 7e50a9bf2589afba2a9cb1dfc3f4605c 167 Gene3D G3DSA:3.30.460.80 2 130 6.0E-12 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26130 7e50a9bf2589afba2a9cb1dfc3f4605c 167 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 85 137 3.0E-4 T 14-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_26130 7e50a9bf2589afba2a9cb1dfc3f4605c 167 SUPERFAMILY SSF143243 10 155 1.7E-20 T 14-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 PACID_27490 f5fe01eaaa1968adb20decaf437ec8d5 165 Hamap MF_01297 UPF0678 fatty acid-binding protein-like protein . 5 165 26.287 T 14-10-2018 IPR022939 Uncharacterised protein family UPF0678 PACID_27490 f5fe01eaaa1968adb20decaf437ec8d5 165 Pfam PF08768 Domain of unknown function (DUF1794) 13 164 2.8E-41 T 14-10-2018 IPR014878 Domain of unknown function DUF1794 PACID_27490 f5fe01eaaa1968adb20decaf437ec8d5 165 SUPERFAMILY SSF50814 8 164 3.79E-39 T 14-10-2018 IPR012674 Calycin PACID_27490 f5fe01eaaa1968adb20decaf437ec8d5 165 Gene3D G3DSA:2.40.128.20 3 165 1.2E-52 T 14-10-2018 IPR012674 Calycin PACID_06490 eeb881042dce469b49e80f98a75362d0 286 Gene3D G3DSA:3.30.420.40 1 108 3.3E-22 T 14-10-2018 PACID_06490 eeb881042dce469b49e80f98a75362d0 286 Gene3D G3DSA:3.30.420.40 109 250 4.8E-31 T 14-10-2018 PACID_06490 eeb881042dce469b49e80f98a75362d0 286 Pfam PF00480 ROK family 5 161 3.0E-16 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 PACID_06490 eeb881042dce469b49e80f98a75362d0 286 SUPERFAMILY SSF53067 3 248 5.66E-35 T 14-10-2018 PACID_01670 b74032c1e33ce6a47e36e34a14fe237f 325 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 14 184 1.2E-11 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 PACID_21560 96ed5174c571d6b9ade7ad60c463a295 182 Pfam PF02620 Uncharacterized ACR, COG1399 69 177 1.1E-31 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD PACID_33120 078dec60f77e729b3cb9eaec0db3609c 494 PRINTS PR01217 Proline rich extensin signature 65 81 1.1E-9 T 14-10-2018 PACID_33120 078dec60f77e729b3cb9eaec0db3609c 494 PRINTS PR01217 Proline rich extensin signature 119 135 1.1E-9 T 14-10-2018 PACID_33120 078dec60f77e729b3cb9eaec0db3609c 494 PRINTS PR01217 Proline rich extensin signature 94 115 1.1E-9 T 14-10-2018 PACID_33120 078dec60f77e729b3cb9eaec0db3609c 494 PRINTS PR01217 Proline rich extensin signature 146 163 1.1E-9 T 14-10-2018 PACID_08670 f840175c9c25136b838ea24134abdfd6 277 Pfam PF09335 SNARE associated Golgi protein 110 232 2.3E-8 T 14-10-2018 IPR032816 SNARE associated Golgi protein PACID_15480 8f23b46a62527fe6903d03c900b4fefd 461 Gene3D G3DSA:3.40.50.300 1 191 2.3E-15 T 14-10-2018 PACID_15450 14cc022a1e96700c2819e4ec12d82071 438 SUPERFAMILY SSF56563 155 431 1.29E-11 T 14-10-2018 PACID_04610 5f0b4b81542819ac80466a7f6873b6d1 340 SUPERFAMILY SSF53448 3 177 1.25E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_04610 5f0b4b81542819ac80466a7f6873b6d1 340 Gene3D G3DSA:3.90.550.10 2 212 2.4E-31 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_04610 5f0b4b81542819ac80466a7f6873b6d1 340 Pfam PF00535 Glycosyl transferase family 2 5 164 3.5E-27 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 PACID_19270 e4fe3d1abb5eb3d8aeeb4c44143248d1 440 Pfam PF05103 DivIVA protein 31 136 4.1E-7 T 14-10-2018 IPR007793 DivIVA family PACID_18900 b30c23b35f432d15a99591681c156c0a 272 Pfam PF13401 AAA domain 23 172 4.9E-23 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_18900 b30c23b35f432d15a99591681c156c0a 272 SUPERFAMILY SSF52540 25 265 8.13E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_19010 bd768faf7ab3ae021765ee0135df7b7f 203 SUPERFAMILY SSF55021 1 57 5.95E-5 T 14-10-2018 PACID_12520 15899c08ba8a33b3b21c364522b09590 366 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 95 109 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site PACID_12520 15899c08ba8a33b3b21c364522b09590 366 SUPERFAMILY SSF48576 22 365 9.0E-67 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PACID_12520 15899c08ba8a33b3b21c364522b09590 366 Gene3D G3DSA:1.10.600.10 3 366 2.3E-99 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily PACID_12520 15899c08ba8a33b3b21c364522b09590 366 Pfam PF00348 Polyprenyl synthetase 50 315 1.9E-50 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 PACID_22570 d3c757107f2dcda06123274facc102be 301 Gene3D G3DSA:1.10.3720.10 23 289 3.4E-62 T 14-10-2018 IPR035906 MetI-like superfamily PACID_22570 d3c757107f2dcda06123274facc102be 301 SUPERFAMILY SSF161098 22 301 8.76E-66 T 14-10-2018 IPR035906 MetI-like superfamily PACID_22570 d3c757107f2dcda06123274facc102be 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 106 295 2.1E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_24510 f9252c92d4588048eeb349591ce0634d 411 Pfam PF01636 Phosphotransferase enzyme family 157 349 2.0E-7 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase PACID_24510 f9252c92d4588048eeb349591ce0634d 411 SUPERFAMILY SSF56112 153 343 3.47E-15 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_24510 f9252c92d4588048eeb349591ce0634d 411 Gene3D G3DSA:3.90.1200.10 270 358 3.4E-5 T 14-10-2018 PACID_34040 ec1091758454cd2351c1ad6f7e9c6f65 306 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 15 302 8.3E-114 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 PACID_34040 ec1091758454cd2351c1ad6f7e9c6f65 306 SUPERFAMILY SSF51658 16 304 7.33E-59 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily PACID_34040 ec1091758454cd2351c1ad6f7e9c6f65 306 Pfam PF01261 Xylose isomerase-like TIM barrel 43 235 1.8E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain PACID_34040 ec1091758454cd2351c1ad6f7e9c6f65 306 Gene3D G3DSA:3.20.20.150 8 303 1.0E-80 T 14-10-2018 PACID_23400 f9486cb4cda11a14ae4132860715f0b7 179 Gene3D G3DSA:3.90.25.10 38 160 1.4E-27 T 14-10-2018 PACID_23400 f9486cb4cda11a14ae4132860715f0b7 179 SUPERFAMILY SSF51735 1 166 3.82E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_23400 f9486cb4cda11a14ae4132860715f0b7 179 Gene3D G3DSA:3.40.50.720 1 158 1.4E-27 T 14-10-2018 PACID_16180 ef1e742aa9c99ea215cd981b61a42b2a 663 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 13 609 3.1E-232 T 14-10-2018 IPR004814 Oligopeptide transporter OPT PACID_16180 ef1e742aa9c99ea215cd981b61a42b2a 663 Pfam PF03169 OPT oligopeptide transporter protein 13 607 1.1E-104 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 PACID_16180 ef1e742aa9c99ea215cd981b61a42b2a 663 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 10 608 8.0E-111 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 PACID_22790 978cd15ec0b4edd8c2d904eb990b0dc7 483 Pfam PF01594 AI-2E family transporter 148 454 8.7E-41 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like PACID_21000 94fc860157738ee1b6b45c89661e188c 224 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 23 213 9.3E-14 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PACID_21000 94fc860157738ee1b6b45c89661e188c 224 Pfam PF04973 Nicotinamide mononucleotide transporter 23 213 3.1E-49 T 14-10-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 PACID_08380 4cc219aea538b9a95b83046444b2216f 436 Pfam PF07690 Major Facilitator Superfamily 34 337 4.8E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_08380 4cc219aea538b9a95b83046444b2216f 436 Gene3D G3DSA:1.20.1250.20 23 400 1.3E-34 T 14-10-2018 PACID_08380 4cc219aea538b9a95b83046444b2216f 436 SUPERFAMILY SSF103473 24 401 8.76E-43 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_06280 c612a3f0dbf90249c6871d6d48aa1c29 431 Pfam PF02040 Arsenical pump membrane protein 10 415 2.4E-25 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_06280 c612a3f0dbf90249c6871d6d48aa1c29 431 PRINTS PR00758 Arsenical pump membrane protein signature 107 131 2.2E-12 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_06280 c612a3f0dbf90249c6871d6d48aa1c29 431 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 2.2E-12 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_06280 c612a3f0dbf90249c6871d6d48aa1c29 431 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 2.2E-12 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_06280 c612a3f0dbf90249c6871d6d48aa1c29 431 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 2.2E-12 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 PACID_01580 ada628336abb3190599d571976a0d88b 762 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 110 269 1.4E-29 T 14-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like PACID_06600 c36ca2c5c54bef9773c46099707a4a14 94 Gene3D G3DSA:3.30.70.100 1 86 3.6E-24 T 14-10-2018 PACID_06600 c36ca2c5c54bef9773c46099707a4a14 94 SUPERFAMILY SSF54909 1 92 1.56E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel PACID_06600 c36ca2c5c54bef9773c46099707a4a14 94 Pfam PF05336 L-rhamnose mutarotase 1 81 1.2E-21 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 PACID_12040 12fcd75fac8f531676e0f54d9ae0da0c 377 Pfam PF00534 Glycosyl transferases group 1 203 341 7.7E-23 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_12040 12fcd75fac8f531676e0f54d9ae0da0c 377 Pfam PF13439 Glycosyltransferase Family 4 23 191 2.1E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 PACID_12040 12fcd75fac8f531676e0f54d9ae0da0c 377 Gene3D G3DSA:3.40.50.2000 198 360 3.8E-31 T 14-10-2018 PACID_12040 12fcd75fac8f531676e0f54d9ae0da0c 377 SUPERFAMILY SSF53756 19 376 1.57E-60 T 14-10-2018 PACID_12040 12fcd75fac8f531676e0f54d9ae0da0c 377 Gene3D G3DSA:3.40.50.2000 18 197 8.9E-19 T 14-10-2018 PACID_11100 243aa2f960a44f0e3eedcd2f771eb08a 224 Gene3D G3DSA:3.40.1490.10 140 222 1.1E-6 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 PACID_11100 243aa2f960a44f0e3eedcd2f771eb08a 224 SUPERFAMILY SSF102462 139 224 2.96E-16 T 14-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 PACID_11360 f6d1a7e0c7ccff026096b40bf0bd9213 184 Pfam PF00857 Isochorismatase family 8 168 3.3E-20 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 PACID_11360 f6d1a7e0c7ccff026096b40bf0bd9213 184 Gene3D G3DSA:3.40.50.850 1 184 2.0E-20 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PACID_11360 f6d1a7e0c7ccff026096b40bf0bd9213 184 SUPERFAMILY SSF52499 6 183 2.75E-24 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 PACID_11470 90b3041cddae8cf752e4a58da307647c 453 Pfam PF13685 Iron-containing alcohol dehydrogenase 20 289 3.1E-58 T 14-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 PACID_11470 90b3041cddae8cf752e4a58da307647c 453 SUPERFAMILY SSF56796 18 425 1.03E-40 T 14-10-2018 PACID_11470 90b3041cddae8cf752e4a58da307647c 453 Gene3D G3DSA:3.40.50.1970 14 169 1.9E-27 T 14-10-2018 PACID_24850 b2b9a9f49a34933782ed8d4a346ab7f7 103 Pfam PF04024 PspC domain 4 59 1.1E-18 T 14-10-2018 IPR007168 Phage shock protein, PspC, N-terminal PACID_32020 ec4f7e208b252da46ea3f71c9675cd66 571 Gene3D G3DSA:3.20.20.80 20 498 1.1E-137 T 14-10-2018 PACID_32020 ec4f7e208b252da46ea3f71c9675cd66 571 SMART SM00642 28 440 2.1E-116 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_32020 ec4f7e208b252da46ea3f71c9675cd66 571 SUPERFAMILY SSF51445 18 500 3.1E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_32020 ec4f7e208b252da46ea3f71c9675cd66 571 Gene3D G3DSA:3.90.400.10 120 192 1.1E-137 T 14-10-2018 PACID_32020 ec4f7e208b252da46ea3f71c9675cd66 571 Pfam PF00128 Alpha amylase, catalytic domain 43 408 4.9E-73 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 PACID_09840 71b588d7c033527a40cc1fbf06e22c2d 492 Pfam PF00860 Permease family 30 425 6.2E-70 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 PACID_20770 65725a284c8b8e46bfc5dfed8c0763f7 347 SUPERFAMILY SSF52374 13 272 6.7E-68 T 14-10-2018 PACID_20770 65725a284c8b8e46bfc5dfed8c0763f7 347 PRINTS PR00987 Glutamyl-tRNA synthetase signature 15 27 2.3E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_20770 65725a284c8b8e46bfc5dfed8c0763f7 347 PRINTS PR00987 Glutamyl-tRNA synthetase signature 185 195 2.3E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_20770 65725a284c8b8e46bfc5dfed8c0763f7 347 PRINTS PR00987 Glutamyl-tRNA synthetase signature 44 57 2.3E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_20770 65725a284c8b8e46bfc5dfed8c0763f7 347 PRINTS PR00987 Glutamyl-tRNA synthetase signature 29 40 2.3E-13 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 PACID_20770 65725a284c8b8e46bfc5dfed8c0763f7 347 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 15 247 1.5E-39 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 PACID_20770 65725a284c8b8e46bfc5dfed8c0763f7 347 Gene3D G3DSA:3.40.50.620 6 281 2.2E-72 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold PACID_11670 908c1c6dbca6ce61b1c1a83401794c49 104 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 46 76 1.1E-8 T 14-10-2018 IPR019933 DivIVA domain PACID_07760 116902c0e0bf1f005782cda061abfefb 280 SUPERFAMILY SSF53335 25 234 1.05E-22 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_07760 116902c0e0bf1f005782cda061abfefb 280 Gene3D G3DSA:3.40.50.150 11 267 1.8E-55 T 14-10-2018 PACID_27690 c0941c51db0012fcc61901719e311f03 81 SUPERFAMILY SSF143800 1 79 1.8E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_27690 c0941c51db0012fcc61901719e311f03 81 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 26.197 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27690 c0941c51db0012fcc61901719e311f03 81 Pfam PF01197 Ribosomal protein L31 1 79 1.1E-31 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27690 c0941c51db0012fcc61901719e311f03 81 PRINTS PR01249 Ribosomal protein L31 signature 45 60 5.1E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27690 c0941c51db0012fcc61901719e311f03 81 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.1E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27690 c0941c51db0012fcc61901719e311f03 81 PRINTS PR01249 Ribosomal protein L31 signature 60 78 5.1E-19 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27690 c0941c51db0012fcc61901719e311f03 81 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 1.1E-22 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27690 c0941c51db0012fcc61901719e311f03 81 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 PACID_27690 c0941c51db0012fcc61901719e311f03 81 Gene3D G3DSA:2.30.170.50 1 81 1.1E-27 T 14-10-2018 PACID_07670 1fcab7491a87cf1bbf05d0636c59240e 303 Pfam PF00005 ABC transporter 20 157 2.0E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_07670 1fcab7491a87cf1bbf05d0636c59240e 303 SUPERFAMILY SSF52540 3 220 7.17E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_07670 1fcab7491a87cf1bbf05d0636c59240e 303 SMART SM00382 29 207 8.6E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_07670 1fcab7491a87cf1bbf05d0636c59240e 303 Gene3D G3DSA:3.40.50.300 1 232 3.0E-40 T 14-10-2018 PACID_09550 a9036df752faf63e6c8786db9e4bd8ec 286 Pfam PF00892 EamA-like transporter family 6 136 5.5E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_09550 a9036df752faf63e6c8786db9e4bd8ec 286 Pfam PF00892 EamA-like transporter family 150 285 9.3E-9 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 PACID_09550 a9036df752faf63e6c8786db9e4bd8ec 286 SUPERFAMILY SSF103481 189 285 7.98E-11 T 14-10-2018 PACID_09550 a9036df752faf63e6c8786db9e4bd8ec 286 SUPERFAMILY SSF103481 54 139 6.02E-10 T 14-10-2018 PACID_20020 86fc8d1b1d0d1cf5d853e9797742f9f4 204 Gene3D G3DSA:3.30.2010.10 98 176 8.4E-8 T 14-10-2018 PACID_20020 86fc8d1b1d0d1cf5d853e9797742f9f4 204 Pfam PF01863 Protein of unknown function DUF45 102 166 4.0E-17 T 14-10-2018 IPR002725 Protein of unknown function DUF45 PACID_21010 f3c18cc72433743edf16eb95389a3cdb 193 TIGRFAM TIGR03847 TIGR03847: conserved hypothetical protein 5 185 3.1E-58 T 14-10-2018 IPR021441 Protein of unknown function DUF3090 PACID_21010 f3c18cc72433743edf16eb95389a3cdb 193 Pfam PF11290 Protein of unknown function (DUF3090) 6 181 3.3E-55 T 14-10-2018 IPR021441 Protein of unknown function DUF3090 PACID_23750 62c72ed842bbc5ec496300fcf3f8a739 281 SUPERFAMILY SSF52317 77 261 1.85E-24 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_23750 62c72ed842bbc5ec496300fcf3f8a739 281 Pfam PF00117 Glutamine amidotransferase class-I 85 230 1.8E-8 T 14-10-2018 IPR017926 Glutamine amidotransferase PACID_23750 62c72ed842bbc5ec496300fcf3f8a739 281 Gene3D G3DSA:3.40.50.880 42 277 2.4E-34 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like PACID_04270 cf232fc8f9c223f94d7680b796c7db03 246 Pfam PF09335 SNARE associated Golgi protein 66 193 1.0E-18 T 14-10-2018 IPR032816 SNARE associated Golgi protein PACID_16260 f58ac2674f84e66bdb7ffb372757bbe7 248 Pfam PF12502 Protein of unknown function (DUF3710) 64 245 1.3E-48 T 14-10-2018 IPR022183 Protein of unknown function DUF3710 PACID_31420 a08810737b9dab05a20682064cc9a814 491 Gene3D G3DSA:3.30.590.20 38 464 1.9E-55 T 14-10-2018 PACID_31420 a08810737b9dab05a20682064cc9a814 491 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 185 255 2.6E-4 T 14-10-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 PACID_31420 a08810737b9dab05a20682064cc9a814 491 SUPERFAMILY SSF55931 38 461 4.51E-46 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 PACID_31420 a08810737b9dab05a20682064cc9a814 491 PIRSF PIRSF012666 1 491 4.3E-183 T 14-10-2018 IPR016602 Uncharacterised conserved protein UCP012666 PACID_00170 ccc317350b1a90df1b044d4f9834f148 314 Gene3D G3DSA:3.40.50.2300 138 274 2.0E-86 T 14-10-2018 PACID_00170 ccc317350b1a90df1b044d4f9834f148 314 Gene3D G3DSA:3.40.50.2300 44 293 2.0E-86 T 14-10-2018 PACID_00170 ccc317350b1a90df1b044d4f9834f148 314 SUPERFAMILY SSF53822 33 313 2.83E-85 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_00170 ccc317350b1a90df1b044d4f9834f148 314 Pfam PF13407 Periplasmic binding protein domain 40 293 1.5E-63 T 14-10-2018 IPR025997 Periplasmic binding protein PACID_00750 7e86f8774f88565b45d03941cfeac75b 361 Gene3D G3DSA:1.50.10.20 94 335 7.4E-12 T 14-10-2018 PACID_00750 7e86f8774f88565b45d03941cfeac75b 361 SUPERFAMILY SSF48239 130 308 2.46E-12 T 14-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid PACID_01390 0813f810323246aa790f632550e75015 117 Pfam PF01934 Protein of unknown function DUF86 24 110 4.2E-18 T 14-10-2018 IPR008201 Protein of unknown function DUF86 PACID_00290 56def394f46e256bd6bb8c02d0945bf9 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 41 7.5E-11 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PACID_00290 56def394f46e256bd6bb8c02d0945bf9 87 Gene3D G3DSA:3.40.1620.10 1 38 6.6E-8 T 14-10-2018 PACID_00290 56def394f46e256bd6bb8c02d0945bf9 87 SUPERFAMILY SSF143120 1 42 1.44E-8 T 14-10-2018 IPR036165 YefM-like superfamily PACID_00290 56def394f46e256bd6bb8c02d0945bf9 87 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 3 38 2.2E-10 T 14-10-2018 PACID_16600 6db34a3342e8e88321c77f7a1d17c80f 247 Gene3D G3DSA:3.30.70.1880 105 247 5.1E-42 T 14-10-2018 PACID_16600 6db34a3342e8e88321c77f7a1d17c80f 247 Pfam PF05949 Bacterial protein of unknown function (DUF881) 106 243 4.2E-34 T 14-10-2018 IPR010273 Protein of unknown function DUF881 PACID_08450 04773f201cf7f1c12222e0f33870335b 190 Pfam PF03780 Asp23 family, cell envelope-related function 54 164 2.8E-30 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 PACID_31470 c170217eb72b5b1213d82854f11bbf52 247 Pfam PF01925 Sulfite exporter TauE/SafE 10 241 2.1E-24 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PACID_29520 40003be3b839b4f9422aaf0ba829a7e4 88 Pfam PF04226 Transglycosylase associated protein 34 82 1.6E-9 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 PACID_29070 e55af770ed79ea0aaedd4a9648f50ebd 351 SUPERFAMILY SSF52540 133 343 2.29E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_29070 e55af770ed79ea0aaedd4a9648f50ebd 351 TIGRFAM TIGR03815 CpaE_hom_Actino: helicase/secretion neighborhood CpaE-like protein 25 343 8.6E-63 T 14-10-2018 IPR022521 Conserved hypothetical protein CHP03815, CpaE-like PACID_29070 e55af770ed79ea0aaedd4a9648f50ebd 351 Gene3D G3DSA:3.40.50.300 130 351 1.3E-15 T 14-10-2018 PACID_29870 225746ae3313ebcf459a6f6c39bd8599 533 Gene3D G3DSA:1.10.132.100 390 533 1.3E-14 T 14-10-2018 PACID_29870 225746ae3313ebcf459a6f6c39bd8599 533 TIGRFAM TIGR02547 casA_cse1: CRISPR type I-E/ECOLI-associated protein CasA/Cse1 8 414 2.3E-44 T 14-10-2018 IPR013381 CRISPR-associated protein Cse1 PACID_29870 225746ae3313ebcf459a6f6c39bd8599 533 Pfam PF09481 CRISPR-associated protein Cse1 (CRISPR_cse1) 8 479 2.6E-103 T 14-10-2018 IPR013381 CRISPR-associated protein Cse1 PACID_00020 48aa4a0826eb3c36f1469ffb4a1208f0 272 Pfam PF00005 ABC transporter 25 171 5.0E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_00020 48aa4a0826eb3c36f1469ffb4a1208f0 272 SMART SM00382 34 220 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_00020 48aa4a0826eb3c36f1469ffb4a1208f0 272 Gene3D G3DSA:3.40.50.300 7 269 3.2E-66 T 14-10-2018 PACID_00020 48aa4a0826eb3c36f1469ffb4a1208f0 272 SUPERFAMILY SSF52540 9 224 3.34E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_03760 58c74ba6250ab2d0a63d0da0733d9e38 101 Pfam PF01402 Ribbon-helix-helix protein, copG family 66 100 5.4E-6 T 14-10-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 PACID_09770 9f99226b472cc85f0c6824fb7a4631a0 432 SUPERFAMILY SSF52777 29 146 2.56E-7 T 14-10-2018 PACID_24380 dcb52e2c165c1ebf2b7771bb6a5ff182 585 TIGRFAM TIGR04480 D_pro_red_PrdA: D-proline reductase (dithiol), PrdA proprotein 5 585 2.7E-252 T 14-10-2018 IPR031002 D-proline reductase, PrdA proprotein GO:0050002|GO:0055114 KEGG: 00330+1.21.4.1 PACID_24380 dcb52e2c165c1ebf2b7771bb6a5ff182 585 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 349 509 2.2E-22 T 14-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 PACID_29490 68dbd439c29dceb8dc2372dfbcf57254 441 Pfam PF00561 alpha/beta hydrolase fold 75 205 1.2E-16 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 PACID_29490 68dbd439c29dceb8dc2372dfbcf57254 441 SUPERFAMILY SSF53474 59 427 6.2E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_29490 68dbd439c29dceb8dc2372dfbcf57254 441 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 76 84 8.1E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PACID_29490 68dbd439c29dceb8dc2372dfbcf57254 441 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 164 178 8.1E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PACID_29490 68dbd439c29dceb8dc2372dfbcf57254 441 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 110 121 8.1E-8 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 PACID_24400 71c1eb0847caa23bb48931c52dd98655 269 Pfam PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) 55 176 3.2E-15 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 PACID_24400 71c1eb0847caa23bb48931c52dd98655 269 TIGRFAM TIGR01918 various_sel_PB: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family 53 238 1.5E-22 T 14-10-2018 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family GO:0050485|GO:0055114 PACID_24400 71c1eb0847caa23bb48931c52dd98655 269 TIGRFAM TIGR04483 D_pro_red_PrdB: D-proline reductase (dithiol), PrdB protein 32 269 8.2E-134 T 14-10-2018 IPR022787 D-proline reductase (dithiol), PrdB protein GO:0050002|GO:0055114 KEGG: 00330+1.21.4.1 PACID_08520 4cdb93151154f797ff225c91a845753c 304 Gene3D G3DSA:3.40.960.10 184 288 5.9E-10 T 14-10-2018 PACID_08520 4cdb93151154f797ff225c91a845753c 304 SUPERFAMILY SSF52980 185 285 1.13E-7 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_18450 c7e42a1b47fdfb62586517e013e5b4f2 181 Pfam PF02358 Trehalose-phosphatase 35 85 3.3E-7 T 14-10-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 PACID_18450 c7e42a1b47fdfb62586517e013e5b4f2 181 SUPERFAMILY SSF56784 32 112 1.34E-11 T 14-10-2018 IPR036412 HAD-like superfamily PACID_18450 c7e42a1b47fdfb62586517e013e5b4f2 181 Gene3D G3DSA:3.40.50.1000 31 116 2.1E-11 T 14-10-2018 IPR023214 HAD superfamily PACID_12270 a8cbafa6065024b0c9246ca8c5a4ff64 349 Gene3D G3DSA:2.102.10.10 180 338 9.9E-38 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PACID_12270 a8cbafa6065024b0c9246ca8c5a4ff64 349 SUPERFAMILY SSF50022 183 343 3.54E-27 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 PACID_12270 a8cbafa6065024b0c9246ca8c5a4ff64 349 PRINTS PR00162 Rieske 2Fe-2S subunit signature 296 308 1.6E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PACID_12270 a8cbafa6065024b0c9246ca8c5a4ff64 349 PRINTS PR00162 Rieske 2Fe-2S subunit signature 282 294 1.6E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PACID_12270 a8cbafa6065024b0c9246ca8c5a4ff64 349 PRINTS PR00162 Rieske 2Fe-2S subunit signature 260 271 1.6E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 PACID_12270 a8cbafa6065024b0c9246ca8c5a4ff64 349 Pfam PF00355 Rieske [2Fe-2S] domain 244 312 1.6E-9 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 PACID_28290 a9189090fac7bcc4d1d75609d762a5cd 299 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 291 6.2E-88 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 PACID_28290 a9189090fac7bcc4d1d75609d762a5cd 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 210 3.4E-12 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 PACID_28290 a9189090fac7bcc4d1d75609d762a5cd 299 SUPERFAMILY SSF51735 1 254 1.31E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_28290 a9189090fac7bcc4d1d75609d762a5cd 299 Pfam PF08338 Domain of unknown function (DUF1731) 247 292 3.2E-8 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 PACID_28290 a9189090fac7bcc4d1d75609d762a5cd 299 Gene3D G3DSA:3.40.50.720 1 284 8.9E-72 T 14-10-2018 PACID_00850 ab283b5c690bcd754b1c93441b74cb6d 252 Pfam PF03713 Domain of unknown function (DUF305) 53 248 9.4E-41 T 14-10-2018 IPR005183 Domain of unknown function DUF305 PACID_00850 ab283b5c690bcd754b1c93441b74cb6d 252 Gene3D G3DSA:1.20.1260.10 145 252 8.8E-26 T 14-10-2018 IPR012347 Ferritin-like PACID_00850 ab283b5c690bcd754b1c93441b74cb6d 252 Gene3D G3DSA:1.20.1260.10 45 144 1.0E-20 T 14-10-2018 IPR012347 Ferritin-like PACID_19600 7b80dead5dc48a151fcd977d53135f5e 501 Pfam PF13313 Domain of unknown function (DUF4082) 30 171 1.6E-40 T 14-10-2018 IPR025141 Domain of unknown function DUF4082 PACID_04860 4f5f0a5f97590c28f1e96625f9046571 440 Pfam PF04932 O-Antigen ligase 220 362 2.2E-6 T 14-10-2018 IPR007016 O-antigen ligase-related PACID_27100 f4b71a79261ff5fe3e9cde84b998d26b 316 Gene3D G3DSA:3.40.50.1820 23 315 7.2E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_27100 f4b71a79261ff5fe3e9cde84b998d26b 316 Pfam PF12146 Serine aminopeptidase, S33 45 240 9.5E-19 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 PACID_27100 f4b71a79261ff5fe3e9cde84b998d26b 316 SUPERFAMILY SSF53474 26 315 4.12E-29 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_09070 b7231db6c2c78f6858de19535a97412c 310 Gene3D G3DSA:3.40.960.10 194 294 1.8E-6 T 14-10-2018 PACID_03920 4479e0f115b1155ab23767634c40546f 71 Gene3D G3DSA:3.40.50.10490 8 55 2.9E-6 T 14-10-2018 PACID_26980 fc11b2ed98a1a150dff247640bfe220d 216 Gene3D G3DSA:3.40.50.720 1 215 2.9E-45 T 14-10-2018 PACID_26980 fc11b2ed98a1a150dff247640bfe220d 216 SUPERFAMILY SSF51735 1 203 2.22E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_26980 fc11b2ed98a1a150dff247640bfe220d 216 Pfam PF13460 NAD(P)H-binding 8 192 2.0E-45 T 14-10-2018 IPR016040 NAD(P)-binding domain PACID_04240 15d5a5de96f1d7230cf5c819c41b08db 172 Pfam PF14016 Protein of unknown function (DUF4232) 30 168 7.4E-26 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 PACID_26190 cd64a231337476b56fbee4b43987781c 363 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 328 1.8E-35 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_00270 3a7c9842fd88ee7bf8e9d2b92531dd2e 103 Gene3D G3DSA:1.10.260.40 16 94 7.6E-18 T 14-10-2018 PACID_00270 3a7c9842fd88ee7bf8e9d2b92531dd2e 103 SMART SM00530 36 92 1.0E-11 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_00270 3a7c9842fd88ee7bf8e9d2b92531dd2e 103 SUPERFAMILY SSF47413 34 91 2.31E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_00270 3a7c9842fd88ee7bf8e9d2b92531dd2e 103 Pfam PF13560 Helix-turn-helix domain 37 88 2.9E-13 T 14-10-2018 PACID_16500 f76123ea0cc105c317a74cc5004c0815 70 SUPERFAMILY SSF51445 1 58 1.63E-6 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_16500 f76123ea0cc105c317a74cc5004c0815 70 Gene3D G3DSA:3.20.20.80 1 67 4.1E-14 T 14-10-2018 PACID_07450 601d37c924d451e9d5f7dede0a7f94ab 724 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 491 697 1.2E-58 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal PACID_07450 601d37c924d451e9d5f7dede0a7f94ab 724 Pfam PF12698 ABC-2 family transporter protein 303 692 1.2E-8 T 14-10-2018 PACID_07450 601d37c924d451e9d5f7dede0a7f94ab 724 Pfam PF12698 ABC-2 family transporter protein 23 211 8.4E-11 T 14-10-2018 PACID_07450 601d37c924d451e9d5f7dede0a7f94ab 724 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 14 173 3.0E-49 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal PACID_27020 762aabfe2dc0aa74941d32bc2f2db668 431 Pfam PF13458 Periplasmic binding protein 61 364 9.5E-36 T 14-10-2018 IPR028081 Leucine-binding protein domain PACID_27020 762aabfe2dc0aa74941d32bc2f2db668 431 Gene3D G3DSA:3.40.50.2300 63 363 1.9E-54 T 14-10-2018 PACID_27020 762aabfe2dc0aa74941d32bc2f2db668 431 Gene3D G3DSA:3.40.50.2300 181 306 1.9E-54 T 14-10-2018 PACID_27020 762aabfe2dc0aa74941d32bc2f2db668 431 SUPERFAMILY SSF53822 60 415 1.46E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_16490 1b4155775c1fe5453b024e94c105f638 103 SUPERFAMILY SSF51445 2 96 4.63E-14 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_16490 1b4155775c1fe5453b024e94c105f638 103 Gene3D G3DSA:3.20.20.80 1 103 4.4E-22 T 14-10-2018 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 Pfam PF00406 Adenylate kinase 5 163 8.4E-55 T 14-10-2018 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 Hamap MF_00235 Adenylate kinase [adk]. 1 186 43.812 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 SUPERFAMILY SSF52540 1 186 6.6E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 Gene3D G3DSA:3.40.50.300 1 188 1.9E-61 T 14-10-2018 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 PRINTS PR00094 Adenylate kinase signature 133 148 8.8E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 PRINTS PR00094 Adenylate kinase signature 32 46 8.8E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 PRINTS PR00094 Adenylate kinase signature 4 17 8.8E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 PRINTS PR00094 Adenylate kinase signature 150 164 8.8E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PACID_25430 45f83ef36652bfd3207f8b444f1cbd8c 189 PRINTS PR00094 Adenylate kinase signature 81 97 8.8E-35 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 PACID_00660 c2af1c6e29770ed3d517b6082a8aca98 251 Gene3D G3DSA:1.25.40.10 34 158 3.7E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_00660 c2af1c6e29770ed3d517b6082a8aca98 251 SUPERFAMILY SSF48452 50 152 1.43E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 PACID_33220 c8f59166a2f151c53ae8b5f7324ba553 243 SUPERFAMILY SSF89392 61 239 5.89E-11 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX PACID_33220 c8f59166a2f151c53ae8b5f7324ba553 243 Gene3D G3DSA:2.50.20.20 53 240 2.4E-5 T 14-10-2018 PACID_29370 8fa06d492e7c1dc8b1f1bdbe20c488ca 272 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 271 30.294 T 14-10-2018 IPR005583 Peroxide stress protein YaaA PACID_29370 8fa06d492e7c1dc8b1f1bdbe20c488ca 272 Pfam PF03883 Peroxide stress protein YaaA 2 259 6.7E-77 T 14-10-2018 IPR005583 Peroxide stress protein YaaA PACID_17100 84e7e5e93062cb9f27b407398fd932ad 87 SMART SM00530 14 69 7.2E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 PACID_17100 84e7e5e93062cb9f27b407398fd932ad 87 SUPERFAMILY SSF47413 9 75 4.59E-14 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 PACID_17100 84e7e5e93062cb9f27b407398fd932ad 87 Gene3D G3DSA:1.10.260.40 8 69 7.9E-14 T 14-10-2018 PACID_17100 84e7e5e93062cb9f27b407398fd932ad 87 Pfam PF13560 Helix-turn-helix domain 10 64 4.3E-15 T 14-10-2018 PACID_00860 7b608af7feba707aae954f62f1ce755e 352 SUPERFAMILY SSF88713 127 349 2.28E-32 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 PACID_00860 7b608af7feba707aae954f62f1ce755e 352 Pfam PF01522 Polysaccharide deacetylase 145 261 2.8E-14 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 PACID_00860 7b608af7feba707aae954f62f1ce755e 352 Gene3D G3DSA:3.20.20.370 113 351 4.6E-45 T 14-10-2018 PACID_20420 bd0479a50d3105df1493d140e71ef246 225 Pfam PF05656 Protein of unknown function (DUF805) 91 211 2.3E-23 T 14-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 PACID_20420 bd0479a50d3105df1493d140e71ef246 225 SUPERFAMILY SSF81995 5 65 1.41E-6 T 14-10-2018 PACID_29690 fbfc41699e7d1d742ac2c06b65e6e4db 97 Pfam PF14019 Protein of unknown function (DUF4235) 14 92 1.9E-22 T 14-10-2018 IPR025329 Protein of unknown function DUF4235 PACID_06040 7ad8d0c192dd1c1c995ea8054fe82541 109 Pfam PF02575 YbaB/EbfC DNA-binding family 20 106 5.4E-30 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PACID_06040 7ad8d0c192dd1c1c995ea8054fe82541 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 14 102 2.0E-21 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PACID_06040 7ad8d0c192dd1c1c995ea8054fe82541 109 Gene3D G3DSA:3.30.1310.10 7 109 1.4E-30 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PACID_06040 7ad8d0c192dd1c1c995ea8054fe82541 109 PIRSF PIRSF004555 11 109 1.7E-29 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PACID_06040 7ad8d0c192dd1c1c995ea8054fe82541 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 13 107 20.051 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family PACID_06040 7ad8d0c192dd1c1c995ea8054fe82541 109 SUPERFAMILY SSF82607 15 104 1.03E-24 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily PACID_29030 497ec6553f9212e7b5925f17ba01d245 88 Pfam PF14029 Protein of unknown function (DUF4244) 37 80 6.3E-14 T 14-10-2018 IPR025338 Protein of unknown function DUF4244 PACID_22720 61c76e10cbfa51cfdcc856289e2ac9c6 190 Gene3D G3DSA:3.40.50.300 14 187 1.9E-8 T 14-10-2018 PACID_22720 61c76e10cbfa51cfdcc856289e2ac9c6 190 SUPERFAMILY SSF52540 16 141 9.62E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_08710 f8126ac7f7768d5840fb26b05518ef80 358 Gene3D G3DSA:3.30.565.10 237 357 6.5E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_08710 f8126ac7f7768d5840fb26b05518ef80 358 SUPERFAMILY SSF55874 282 357 1.63E-7 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_08710 f8126ac7f7768d5840fb26b05518ef80 358 Pfam PF07730 Histidine kinase 173 236 7.6E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_32550 81a16f1ea535865d2bef89ac033d5fde 350 Gene3D G3DSA:3.30.565.10 221 342 1.0E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_32550 81a16f1ea535865d2bef89ac033d5fde 350 Pfam PF07730 Histidine kinase 154 214 2.6E-7 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 PACID_06430 a8b3f30ad0b3676e71da800a15a74672 223 Pfam PF02698 DUF218 domain 50 188 4.5E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 PACID_01290 1dd37a8432d7c5718195acbcd451c222 99 Pfam PF07811 TadE-like protein 1 30 2.7E-5 T 14-10-2018 IPR012495 TadE-like PACID_07550 7f34731854ea228a47e71e411b845f3a 545 Pfam PF12161 HsdM N-terminal domain 17 155 6.2E-27 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain PACID_07550 7f34731854ea228a47e71e411b845f3a 545 SUPERFAMILY SSF53335 15 543 2.63E-136 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_07550 7f34731854ea228a47e71e411b845f3a 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 209 3.4E-20 T 14-10-2018 PACID_07550 7f34731854ea228a47e71e411b845f3a 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 322 346 3.4E-20 T 14-10-2018 PACID_07550 7f34731854ea228a47e71e411b845f3a 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 230 3.4E-20 T 14-10-2018 PACID_07550 7f34731854ea228a47e71e411b845f3a 545 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 290 302 3.4E-20 T 14-10-2018 PACID_07550 7f34731854ea228a47e71e411b845f3a 545 Gene3D G3DSA:1.20.1260.30 7 159 4.3E-45 T 14-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily PACID_07550 7f34731854ea228a47e71e411b845f3a 545 Pfam PF02384 N-6 DNA Methylase 169 508 5.0E-114 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 PACID_07550 7f34731854ea228a47e71e411b845f3a 545 Gene3D G3DSA:3.40.50.150 170 491 1.3E-108 T 14-10-2018 PACID_17180 0eb3986df8f548a19c90fa44e5c3e09a 225 Pfam PF11139 Sap, sulfolipid-1-addressing protein 9 215 3.4E-21 T 14-10-2018 IPR021315 Glycolipid exporter Gap/Sap PACID_20290 7f6b47c02d02cb768d2913bd22e583e3 219 Pfam PF08044 Domain of unknown function (DUF1707) 27 78 4.6E-16 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 PACID_24010 da67e4c0066d85d243f74e1bc461576a 74 Pfam PF08271 TFIIB zinc-binding 23 48 6.6E-7 T 14-10-2018 IPR013137 Zinc finger, TFIIB-type PACID_24010 da67e4c0066d85d243f74e1bc461576a 74 SUPERFAMILY SSF158997 15 70 1.18E-12 T 14-10-2018 PACID_24010 da67e4c0066d85d243f74e1bc461576a 74 Gene3D G3DSA:2.20.25.10 31 68 8.7E-14 T 14-10-2018 PACID_12430 26193f4db5dac095a30a4117ea0543af 284 SUPERFAMILY SSF69593 20 161 1.96E-13 T 14-10-2018 PACID_12430 26193f4db5dac095a30a4117ea0543af 284 SMART SM00563 24 120 0.0049 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 PACID_07520 8ba276cb37910d7c609ff22d098365e7 925 SUPERFAMILY SSF52540 179 308 4.02E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_17410 d2f9dccf2f759a738dc3b69b460a55b3 185 SUPERFAMILY SSF116734 37 162 6.7E-7 T 14-10-2018 PACID_17410 d2f9dccf2f759a738dc3b69b460a55b3 185 Gene3D G3DSA:3.90.220.20 6 166 2.9E-7 T 14-10-2018 PACID_32830 c1043d3a242feb822f5653958aba58ac 443 TIGRFAM TIGR00797 matE: MATE efflux family protein 21 404 1.3E-84 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PACID_32830 c1043d3a242feb822f5653958aba58ac 443 PIRSF PIRSF006603 6 442 1.6E-57 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PACID_32830 c1043d3a242feb822f5653958aba58ac 443 Pfam PF01554 MatE 239 388 1.4E-16 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PACID_32830 c1043d3a242feb822f5653958aba58ac 443 Pfam PF01554 MatE 21 180 3.0E-29 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 PACID_12920 7e903524e235437c7eaf2227ecc38f8b 364 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 37 2.9E-9 T 14-10-2018 IPR019933 DivIVA domain PACID_10890 10e2e9d2456757b0575cde4ca2b11fdf 190 Pfam PF01872 RibD C-terminal domain 4 179 2.8E-11 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PACID_10890 10e2e9d2456757b0575cde4ca2b11fdf 190 Gene3D G3DSA:3.40.430.10 3 183 4.6E-23 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_10890 10e2e9d2456757b0575cde4ca2b11fdf 190 SUPERFAMILY SSF53597 4 186 1.33E-16 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_03310 dd32b8c0516dbc431192398626f667e8 347 Gene3D G3DSA:3.30.420.10 195 346 9.7E-32 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 PACID_03310 dd32b8c0516dbc431192398626f667e8 347 SUPERFAMILY SSF46689 14 120 8.42E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_03310 dd32b8c0516dbc431192398626f667e8 347 SUPERFAMILY SSF53098 150 342 7.59E-37 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily PACID_03310 dd32b8c0516dbc431192398626f667e8 347 Pfam PF13011 leucine-zipper of insertion element IS481 15 89 6.9E-12 T 14-10-2018 IPR024967 DNA-binding domain, IS481-type PACID_03310 dd32b8c0516dbc431192398626f667e8 347 Pfam PF00665 Integrase core domain 148 298 1.6E-32 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 PACID_04640 cb16a4071a5a21b9e616334729395375 422 SUPERFAMILY SSF53756 7 413 3.9E-33 T 14-10-2018 PACID_04640 cb16a4071a5a21b9e616334729395375 422 Pfam PF00534 Glycosyl transferases group 1 246 382 3.4E-12 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 PACID_04640 cb16a4071a5a21b9e616334729395375 422 Gene3D G3DSA:3.40.50.2000 223 404 1.6E-22 T 14-10-2018 PACID_16550 8210cfa72b367e28e50dda11f273b4be 296 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 11 291 1.1E-25 T 14-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 PACID_26790 13d460816b1a47020a600544a9420456 222 Pfam PF01872 RibD C-terminal domain 7 208 4.4E-16 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 PACID_26790 13d460816b1a47020a600544a9420456 222 SUPERFAMILY SSF53597 6 212 1.7E-20 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_26790 13d460816b1a47020a600544a9420456 222 Gene3D G3DSA:3.40.430.10 2 213 3.2E-37 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 PACID_08620 a3fe2a89a644f0109f4f45b8c044a58f 430 Pfam PF13416 Bacterial extracellular solute-binding protein 60 365 1.1E-40 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_08620 a3fe2a89a644f0109f4f45b8c044a58f 430 Gene3D G3DSA:3.40.190.10 38 430 2.5E-91 T 14-10-2018 PACID_08620 a3fe2a89a644f0109f4f45b8c044a58f 430 SUPERFAMILY SSF53850 42 421 6.96E-80 T 14-10-2018 PACID_08130 dcec43bd854ff773e256aa75d8435059 494 Pfam PF03611 PTS system sugar-specific permease component 10 406 1.2E-85 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 PACID_08130 dcec43bd854ff773e256aa75d8435059 494 PIRSF PIRSF006304 4 479 3.1E-140 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 PACID_31160 4da1cd103a5e26f5c394e3d265140b7b 391 Gene3D G3DSA:3.20.20.80 1 182 4.8E-12 T 14-10-2018 PACID_31160 4da1cd103a5e26f5c394e3d265140b7b 391 SUPERFAMILY SSF51445 2 325 1.47E-31 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily PACID_31160 4da1cd103a5e26f5c394e3d265140b7b 391 Gene3D G3DSA:3.20.20.80 224 333 2.9E-6 T 14-10-2018 PACID_20720 1ac9e9555f74ce5d5fce2cfd7a347875 309 Pfam PF00902 Sec-independent protein translocase protein (TatC) 53 273 7.1E-57 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PACID_20720 1ac9e9555f74ce5d5fce2cfd7a347875 309 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 41 290 15.054 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PACID_20720 1ac9e9555f74ce5d5fce2cfd7a347875 309 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 50 77 4.5E-34 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PACID_20720 1ac9e9555f74ce5d5fce2cfd7a347875 309 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 135 153 4.5E-34 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PACID_20720 1ac9e9555f74ce5d5fce2cfd7a347875 309 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 205 233 4.5E-34 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PACID_20720 1ac9e9555f74ce5d5fce2cfd7a347875 309 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 153 179 4.5E-34 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PACID_20720 1ac9e9555f74ce5d5fce2cfd7a347875 309 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 51 278 1.4E-53 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 PACID_03260 ccd1995feed0b740c85eaa7c69aab849 1594 SUPERFAMILY SSF53335 325 1110 1.02E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_03260 ccd1995feed0b740c85eaa7c69aab849 1594 Gene3D G3DSA:3.40.50.150 547 722 9.3E-19 T 14-10-2018 PACID_06190 4c439d1eb96cda1d55fe48d7e1341aa9 163 Pfam PF08044 Domain of unknown function (DUF1707) 7 58 9.0E-23 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 PACID_11590 fe9fea1818a733755dcf00a8dfe418bb 576 Pfam PF04294 VanW like protein 369 491 2.3E-41 T 14-10-2018 IPR007391 Vancomycin resistance VanW PACID_11590 fe9fea1818a733755dcf00a8dfe418bb 576 Pfam PF12229 Putative peptidoglycan binding domain 125 190 9.6E-5 T 14-10-2018 IPR022029 Putative peptidoglycan binding domain PACID_10020 a9d2e968560afae603f1ae2e933aa285 179 Pfam PF04417 Protein of unknown function (DUF501) 29 158 5.8E-40 T 14-10-2018 IPR007511 Protein of unknown function DUF501 PACID_11840 5bd82330ec10360c5727e1cbd24e90ac 261 SUPERFAMILY SSF69618 1 257 4.71E-42 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_11840 5bd82330ec10360c5727e1cbd24e90ac 261 Gene3D G3DSA:3.40.50.10090 1 249 7.2E-48 T 14-10-2018 PACID_11840 5bd82330ec10360c5727e1cbd24e90ac 261 Pfam PF02602 Uroporphyrinogen-III synthase HemD 8 246 2.7E-29 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 PACID_11840 5bd82330ec10360c5727e1cbd24e90ac 261 Gene3D G3DSA:3.40.50.10090 27 165 7.2E-48 T 14-10-2018 PACID_02760 913039628c04c7f5adade5b159e1fcd8 79 Gene3D G3DSA:3.10.20.30 2 79 1.2E-12 T 14-10-2018 IPR012675 Beta-grasp domain superfamily PACID_02760 913039628c04c7f5adade5b159e1fcd8 79 SUPERFAMILY SSF54285 2 79 5.76E-11 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp PACID_02760 913039628c04c7f5adade5b159e1fcd8 79 Pfam PF02597 ThiS family 3 79 2.4E-8 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 PACID_14650 ad3edbef846c4f8e97805d2ee8c29f4b 590 Pfam PF03432 Relaxase/Mobilisation nuclease domain 74 223 2.2E-6 T 14-10-2018 IPR005094 Endonuclease relaxase, MobA/VirD2 PACID_32960 8b030fa2ff8c7ee02105ae73a9fa3775 295 SUPERFAMILY SSF102588 5 240 2.88E-47 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 PACID_32960 8b030fa2ff8c7ee02105ae73a9fa3775 295 Gene3D G3DSA:3.40.50.10320 1 264 6.0E-60 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 PACID_32960 8b030fa2ff8c7ee02105ae73a9fa3775 295 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 147 2.0E-23 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 PACID_26670 24836f417e5d962cc8cbc5715adfb736 144 Pfam PF03358 NADPH-dependent FMN reductase 4 90 2.8E-14 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 PACID_26670 24836f417e5d962cc8cbc5715adfb736 144 SUPERFAMILY SSF52218 2 90 2.27E-11 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PACID_26670 24836f417e5d962cc8cbc5715adfb736 144 Gene3D G3DSA:3.40.50.360 1 97 2.1E-17 T 14-10-2018 IPR029039 Flavoprotein-like superfamily PACID_33940 bc8188eb030fc884684ce811dbf1b966 758 Gene3D G3DSA:3.30.565.10 266 389 6.0E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_33940 bc8188eb030fc884684ce811dbf1b966 758 SUPERFAMILY SSF55874 283 388 1.37E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily PACID_06300 04ec69fa117d3a6f79ba26cfa89477f0 138 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 125 16.4 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PACID_06300 04ec69fa117d3a6f79ba26cfa89477f0 138 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 120 9.7E-21 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 PACID_20240 26624f367fe43daf407f2c2b18214341 215 SUPERFAMILY SSF53271 48 212 4.85E-14 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like PACID_27160 87a78b4ac202ce0b23d29775ca938112 331 Gene3D G3DSA:3.40.960.10 198 309 1.0E-8 T 14-10-2018 PACID_27160 87a78b4ac202ce0b23d29775ca938112 331 SUPERFAMILY SSF52980 237 311 7.51E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_13860 b8031875935010f0d7b0934d61264d5c 152 SUPERFAMILY SSF54593 3 151 1.02E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_13860 b8031875935010f0d7b0934d61264d5c 152 Gene3D G3DSA:3.10.180.10 2 152 6.6E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase PACID_01350 3745aa041f818a3f9cf58cad8e383f5f 439 Pfam PF07690 Major Facilitator Superfamily 52 382 2.7E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 PACID_01350 3745aa041f818a3f9cf58cad8e383f5f 439 Gene3D G3DSA:1.20.1250.20 19 424 1.2E-21 T 14-10-2018 PACID_01350 3745aa041f818a3f9cf58cad8e383f5f 439 SUPERFAMILY SSF103473 46 423 8.37E-20 T 14-10-2018 IPR036259 MFS transporter superfamily PACID_03110 91d1f96f6f8b2698e61f8b46cd4a7b07 227 PRINTS PR01837 MgtC/SapB protein signature 15 34 5.7E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_03110 91d1f96f6f8b2698e61f8b46cd4a7b07 227 PRINTS PR01837 MgtC/SapB protein signature 94 118 5.7E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_03110 91d1f96f6f8b2698e61f8b46cd4a7b07 227 PRINTS PR01837 MgtC/SapB protein signature 34 52 5.7E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_03110 91d1f96f6f8b2698e61f8b46cd4a7b07 227 PRINTS PR01837 MgtC/SapB protein signature 67 89 5.7E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_03110 91d1f96f6f8b2698e61f8b46cd4a7b07 227 Pfam PF02308 MgtC family 12 138 9.1E-33 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_09640 1ce999ded4e4c483eb763d114b4d351b 285 Pfam PF07920 Protein of unknown function (DUF1684) 140 278 4.7E-44 T 14-10-2018 IPR012467 Protein of unknown function DUF1684 PACID_01430 a085ed4a9678854651b7f4100e012f66 239 Gene3D G3DSA:1.10.10.10 156 235 1.5E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily PACID_01430 a085ed4a9678854651b7f4100e012f66 239 SUPERFAMILY SSF88659 154 232 4.3E-6 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like PACID_31930 80e96924808b2d47f9258147a44e0529 243 PRINTS PR01837 MgtC/SapB protein signature 46 64 5.5E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_31930 80e96924808b2d47f9258147a44e0529 243 PRINTS PR01837 MgtC/SapB protein signature 27 46 5.5E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_31930 80e96924808b2d47f9258147a44e0529 243 PRINTS PR01837 MgtC/SapB protein signature 82 104 5.5E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_31930 80e96924808b2d47f9258147a44e0529 243 PRINTS PR01837 MgtC/SapB protein signature 109 133 5.5E-40 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_31930 80e96924808b2d47f9258147a44e0529 243 Pfam PF02308 MgtC family 24 155 1.7E-33 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 PACID_00120 39e68ee6536f43165425ce0f262f9a61 227 Pfam PF12089 Transmembrane domain of unknown function (DUF3566) 107 226 3.1E-40 T 14-10-2018 IPR021949 Domain of unknown function DUF3566. transmembrane PACID_15000 fa7ee89767a66322eda021db2ea4585e 114 Gene3D G3DSA:3.30.420.130 1 111 1.0E-13 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily PACID_15000 fa7ee89767a66322eda021db2ea4585e 114 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 10 104 1.6E-9 T 14-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis PACID_15000 fa7ee89767a66322eda021db2ea4585e 114 SUPERFAMILY SSF53146 1 107 1.12E-13 T 14-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily PACID_05920 fba60aaf31a5f1c6b46697251d58e067 329 Gene3D G3DSA:3.40.960.10 197 307 3.9E-8 T 14-10-2018 PACID_05920 fba60aaf31a5f1c6b46697251d58e067 329 SUPERFAMILY SSF52980 237 306 2.95E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 PACID_05760 aa6ec0ea2f5e9e44ae6be8d763a80f16 332 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 319 1.5E-138 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 PACID_05760 aa6ec0ea2f5e9e44ae6be8d763a80f16 332 Gene3D G3DSA:3.90.25.10 185 312 8.1E-116 T 14-10-2018 PACID_05760 aa6ec0ea2f5e9e44ae6be8d763a80f16 332 Gene3D G3DSA:3.40.50.720 5 299 8.1E-116 T 14-10-2018 PACID_05760 aa6ec0ea2f5e9e44ae6be8d763a80f16 332 SUPERFAMILY SSF51735 1 321 1.19E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_05760 aa6ec0ea2f5e9e44ae6be8d763a80f16 332 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 303 6.0E-78 T 14-10-2018 IPR016040 NAD(P)-binding domain PACID_28960 ac56574a56acecc232bbe95ce22e32fb 87 SUPERFAMILY SSF143120 8 69 2.49E-11 T 14-10-2018 IPR036165 YefM-like superfamily PACID_28960 ac56574a56acecc232bbe95ce22e32fb 87 Gene3D G3DSA:3.40.1620.10 3 44 2.0E-7 T 14-10-2018 PACID_28960 ac56574a56acecc232bbe95ce22e32fb 87 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 6 71 2.1E-12 T 14-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM PACID_28960 ac56574a56acecc232bbe95ce22e32fb 87 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 8 55 1.5E-10 T 14-10-2018 PACID_08730 baa57793c65cc589c1f6396097469720 295 Gene3D G3DSA:3.20.20.20 13 295 1.5E-78 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_08730 baa57793c65cc589c1f6396097469720 295 SUPERFAMILY SSF51717 17 284 9.55E-70 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_08730 baa57793c65cc589c1f6396097469720 295 Pfam PF00809 Pterin binding enzyme 27 267 6.8E-52 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 PACID_08730 baa57793c65cc589c1f6396097469720 295 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 26 281 3.3E-70 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 PACID_02900 7818ec948da868ac0fe4d9715d8bce25 358 Gene3D G3DSA:3.40.50.2300 176 314 7.1E-82 T 14-10-2018 PACID_02900 7818ec948da868ac0fe4d9715d8bce25 358 SUPERFAMILY SSF53822 69 352 1.96E-71 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_02900 7818ec948da868ac0fe4d9715d8bce25 358 Pfam PF13407 Periplasmic binding protein domain 73 332 1.1E-52 T 14-10-2018 IPR025997 Periplasmic binding protein PACID_02900 7818ec948da868ac0fe4d9715d8bce25 358 Gene3D G3DSA:3.40.50.2300 74 330 7.1E-82 T 14-10-2018 PACID_08010 46bb99419bc5e41a5a97f9463e2d4cfe 248 Pfam PF00106 short chain dehydrogenase 3 178 3.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_08010 46bb99419bc5e41a5a97f9463e2d4cfe 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 4.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_08010 46bb99419bc5e41a5a97f9463e2d4cfe 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 4.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_08010 46bb99419bc5e41a5a97f9463e2d4cfe 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 4.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_08010 46bb99419bc5e41a5a97f9463e2d4cfe 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 80 4.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_08010 46bb99419bc5e41a5a97f9463e2d4cfe 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 4.4E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR PACID_08010 46bb99419bc5e41a5a97f9463e2d4cfe 248 SUPERFAMILY SSF51735 3 232 1.6E-55 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_08010 46bb99419bc5e41a5a97f9463e2d4cfe 248 Gene3D G3DSA:3.40.50.720 4 231 1.7E-57 T 14-10-2018 PACID_29180 04e65d5c2ffd4d799708b5e6ce795808 311 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 57 241 5.3E-7 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 PACID_29180 04e65d5c2ffd4d799708b5e6ce795808 311 SUPERFAMILY SSF56300 50 298 4.43E-26 T 14-10-2018 PACID_29180 04e65d5c2ffd4d799708b5e6ce795808 311 Gene3D G3DSA:3.60.21.10 55 278 4.6E-15 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like PACID_19870 c287d9661d000e80e6ba008cb988d7bf 482 SUPERFAMILY SSF53474 28 469 4.23E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_19870 c287d9661d000e80e6ba008cb988d7bf 482 Pfam PF00450 Serine carboxypeptidase 77 190 3.5E-5 T 14-10-2018 IPR001563 Peptidase S10, serine carboxypeptidase GO:0004185|GO:0006508 PACID_19870 c287d9661d000e80e6ba008cb988d7bf 482 Gene3D G3DSA:3.40.50.1820 74 250 1.4E-11 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_03090 3cd8c509e561aaa5b224531d2096b5da 277 Gene3D G3DSA:3.40.630.30 30 179 1.2E-6 T 14-10-2018 PACID_03090 3cd8c509e561aaa5b224531d2096b5da 277 SUPERFAMILY SSF55729 32 147 6.6E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_09180 fbd74e323e85d6b1680b37d80d81b5dd 277 Pfam PF11228 Protein of unknown function (DUF3027) 53 252 6.1E-80 T 14-10-2018 IPR021391 Protein of unknown function DUF3027 PACID_00920 5bd48bc78162759552a6aafc99c6cb28 418 Pfam PF03611 PTS system sugar-specific permease component 7 391 1.3E-58 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 PACID_00920 5bd48bc78162759552a6aafc99c6cb28 418 PIRSF PIRSF006304 1 418 4.5E-140 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 PACID_10370 e171fcb98c8a53de295c9be16d558b79 392 Pfam PF01594 AI-2E family transporter 32 354 8.2E-49 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like PACID_24530 742b1566b57e74b4b119b299301e2f16 325 Gene3D G3DSA:3.40.960.10 211 308 2.8E-11 T 14-10-2018 PACID_18820 816de69e106c8cb0f78ca555ffc4e438 340 SUPERFAMILY SSF81301 34 138 5.78E-8 T 14-10-2018 PACID_18820 816de69e106c8cb0f78ca555ffc4e438 340 Gene3D G3DSA:3.30.460.10 25 145 1.5E-6 T 14-10-2018 PACID_01740 4bc7f59b4a2a3d55f87431b6da826da9 304 Pfam PF01925 Sulfite exporter TauE/SafE 8 245 2.0E-33 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PACID_11720 bb43fbafe4723d80f28e6157c9e7078e 199 Pfam PF07884 Vitamin K epoxide reductase family 20 147 1.6E-25 T 14-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 PACID_11720 bb43fbafe4723d80f28e6157c9e7078e 199 Gene3D G3DSA:1.20.1440.130 6 192 2.8E-16 T 14-10-2018 IPR038354 VKOR domain superfamily Reactome: R-HSA-6806664 PACID_11720 bb43fbafe4723d80f28e6157c9e7078e 199 SMART SM00756 13 154 8.3E-33 T 14-10-2018 IPR012932 Vitamin K epoxide reductase Reactome: R-HSA-6806664 PACID_28440 1f8ba9818f0867fe9dab2511e057940e 175 Pfam PF11377 Protein of unknown function (DUF3180) 35 168 3.8E-26 T 14-10-2018 IPR021517 Protein of unknown function DUF3180 PACID_13760 370c34e12ba57a1202c473bf72ec8b7b 363 Pfam PF13830 Domain of unknown function (DUF4192) 13 300 4.8E-31 T 14-10-2018 IPR025447 Protein of unknown function DUF4192 PACID_27070 37e12cbf6f807e1ce6e30d90013b6f96 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 288 4.0E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_27070 37e12cbf6f807e1ce6e30d90013b6f96 298 SUPERFAMILY SSF161098 25 298 3.79E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_27070 37e12cbf6f807e1ce6e30d90013b6f96 298 Gene3D G3DSA:1.10.3720.10 19 286 5.4E-52 T 14-10-2018 IPR035906 MetI-like superfamily PACID_04830 6a31cbe31dd4cb9cfa3628f4fe8007b9 248 Gene3D G3DSA:3.40.50.300 6 248 1.3E-79 T 14-10-2018 PACID_04830 6a31cbe31dd4cb9cfa3628f4fe8007b9 248 Pfam PF00005 ABC transporter 24 172 1.7E-38 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 PACID_04830 6a31cbe31dd4cb9cfa3628f4fe8007b9 248 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 PACID_04830 6a31cbe31dd4cb9cfa3628f4fe8007b9 248 PIRSF PIRSF039085 5 248 1.3E-111 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 PACID_04830 6a31cbe31dd4cb9cfa3628f4fe8007b9 248 SUPERFAMILY SSF52540 8 242 1.18E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase PACID_04830 6a31cbe31dd4cb9cfa3628f4fe8007b9 248 SMART SM00382 33 220 8.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain PACID_09230 b6c12fcdf56b11d7f0de54fa07ed89d2 340 SUPERFAMILY SSF63829 53 282 3.99E-10 T 14-10-2018 PACID_01220 1aee21504d48f2d88c895ebc70456667 209 SMART SM00858 41 104 2.6E-4 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PACID_01220 1aee21504d48f2d88c895ebc70456667 209 Pfam PF08666 SAF domain 43 98 1.5E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 PACID_09540 d55736d1c344967673cc33fd541dc580 392 Gene3D G3DSA:3.40.640.10 3 390 1.5E-117 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 PACID_09540 d55736d1c344967673cc33fd541dc580 392 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 PACID_09540 d55736d1c344967673cc33fd541dc580 392 Pfam PF00155 Aminotransferase class I and II 31 383 2.1E-59 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 PACID_09540 d55736d1c344967673cc33fd541dc580 392 SUPERFAMILY SSF53383 4 387 3.19E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase PACID_10600 71b0837578d5568aee5a0f0cf16bdc5c 184 Pfam PF07275 Antirestriction protein (ArdA) 13 173 2.4E-32 T 14-10-2018 IPR009899 Antirestriction PACID_05910 b85fa23a6238c3a0e9b1d6ec010076ba 608 Pfam PF03109 ABC1 family 158 282 3.7E-27 T 14-10-2018 IPR004147 UbiB domain PACID_05910 b85fa23a6238c3a0e9b1d6ec010076ba 608 SUPERFAMILY SSF56112 140 499 3.8E-20 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily PACID_13460 45ee3988f3f05d146b0a856258aece7c 87 Gene3D G3DSA:3.40.50.1820 15 72 4.1E-5 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold PACID_22330 ae3b8115d93e34b35b5fb81fde3609b1 282 Pfam PF02104 SURF1 family 17 222 1.1E-27 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_06810 68069bfcc1f2a4fb4e53704543acb349 187 SUPERFAMILY SSF46689 2 81 8.21E-21 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 PACID_06810 68069bfcc1f2a4fb4e53704543acb349 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 61 9.9E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_06810 68069bfcc1f2a4fb4e53704543acb349 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 1.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_06810 68069bfcc1f2a4fb4e53704543acb349 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 1.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 PACID_06810 68069bfcc1f2a4fb4e53704543acb349 187 Gene3D G3DSA:1.10.357.10 10 186 6.1E-34 T 14-10-2018 PACID_14030 9f3bb4db8e1d3e442e1f0f218eef9521 431 Pfam PF01547 Bacterial extracellular solute-binding protein 58 334 7.9E-29 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein PACID_14030 9f3bb4db8e1d3e442e1f0f218eef9521 431 Gene3D G3DSA:3.40.190.10 44 431 4.1E-67 T 14-10-2018 PACID_14030 9f3bb4db8e1d3e442e1f0f218eef9521 431 SUPERFAMILY SSF53850 51 422 5.2E-61 T 14-10-2018 PACID_15930 24f821b815cc8242c5621bff9205cb74 66 Pfam PF14013 MT0933-like antitoxin protein 16 62 1.8E-18 T 14-10-2018 IPR028037 Antitoxin Rv0909/MT0933 PACID_26200 a97c8f6c0fff66017126d18c1c2502a7 364 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 326 3.6E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_05250 07a0c0ab39e682d68e55327e0ace9ee8 226 Pfam PF02589 LUD domain 116 223 3.8E-22 T 14-10-2018 IPR003741 LUD domain PACID_05250 07a0c0ab39e682d68e55327e0ace9ee8 226 Gene3D G3DSA:3.40.50.10420 44 224 3.1E-55 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily PACID_05250 07a0c0ab39e682d68e55327e0ace9ee8 226 SUPERFAMILY SSF100950 45 224 3.43E-35 T 14-10-2018 IPR037171 NagB/RpiA transferase-like PACID_15140 cee3845339ce6b84380d955ba7eaaeb8 164 Pfam PF03682 Uncharacterised protein family (UPF0158) 6 135 1.3E-7 T 14-10-2018 IPR005361 Uncharacterised protein family UPF0158 PACID_07880 22be4f00413b3c79ce19548b8a7849b1 484 Pfam PF13440 Polysaccharide biosynthesis protein 34 325 9.9E-72 T 14-10-2018 PACID_04190 f0039406e672118d51f60b828566b2cd 158 Gene3D G3DSA:3.40.50.2300 113 137 9.5E-36 T 14-10-2018 PACID_04190 f0039406e672118d51f60b828566b2cd 158 SUPERFAMILY SSF53822 2 157 7.85E-34 T 14-10-2018 IPR028082 Periplasmic binding protein-like I PACID_04190 f0039406e672118d51f60b828566b2cd 158 Gene3D G3DSA:3.40.50.2300 2 112 9.5E-36 T 14-10-2018 PACID_04190 f0039406e672118d51f60b828566b2cd 158 Pfam PF13377 Periplasmic binding protein-like domain 2 154 7.2E-28 T 14-10-2018 PACID_01950 2b5b2ba952dc7540209c25cbc4632a38 951 Pfam PF03176 MMPL family 445 709 1.1E-32 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 PACID_01950 2b5b2ba952dc7540209c25cbc4632a38 951 Pfam PF03176 MMPL family 45 377 4.1E-66 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 PACID_01950 2b5b2ba952dc7540209c25cbc4632a38 951 PRINTS PR00702 Acriflavin resistance protein family signature 234 258 1.4E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PACID_01950 2b5b2ba952dc7540209c25cbc4632a38 951 PRINTS PR00702 Acriflavin resistance protein family signature 309 332 1.4E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PACID_01950 2b5b2ba952dc7540209c25cbc4632a38 951 PRINTS PR00702 Acriflavin resistance protein family signature 176 199 1.4E-5 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 PACID_01950 2b5b2ba952dc7540209c25cbc4632a38 951 SUPERFAMILY SSF82866 122 339 1.44E-29 T 14-10-2018 PACID_01950 2b5b2ba952dc7540209c25cbc4632a38 951 SUPERFAMILY SSF82866 468 707 2.88E-31 T 14-10-2018 PACID_29040 48f565cd97b04d84429cab70adcbd377 243 Pfam PF00482 Type II secretion system (T2SS), protein F 109 231 9.9E-14 T 14-10-2018 IPR018076 Type II secretion system F domain PACID_20370 89ab6eaf842358d56bb5d4af21303acc 300 Gene3D G3DSA:3.30.70.3040 41 161 2.6E-25 T 14-10-2018 PACID_20370 89ab6eaf842358d56bb5d4af21303acc 300 Pfam PF02687 FtsX-like permease family 205 295 2.5E-6 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_20370 89ab6eaf842358d56bb5d4af21303acc 300 PIRSF PIRSF003097 1 300 4.2E-85 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 PACID_16220 0cfc0cbe64a48b112935663f1d1383b3 98 Pfam PF13834 Domain of unknown function (DUF4193) 1 98 8.3E-42 T 14-10-2018 IPR025242 Protein of unknown function DUF4193 PACID_20960 a485c4c77cdc1e2c6f4aa56d01ed2ecc 160 Pfam PF07179 SseB protein N-terminal domain 21 133 1.4E-14 T 14-10-2018 IPR009839 SseB protein N-terminal domain PACID_18130 645179ab33de42812f14c0efda25f4ff 227 Pfam PF03729 Short repeat of unknown function (DUF308) 141 184 0.0056 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane PACID_18130 645179ab33de42812f14c0efda25f4ff 227 Pfam PF03729 Short repeat of unknown function (DUF308) 26 94 3.7E-7 T 14-10-2018 IPR005325 Protein of unknown function DUF308, membrane PACID_18170 a609edf9532739e15381bdbbf00f7819 303 Gene3D G3DSA:1.10.3720.10 31 294 2.3E-51 T 14-10-2018 IPR035906 MetI-like superfamily PACID_18170 a609edf9532739e15381bdbbf00f7819 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 288 5.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_18170 a609edf9532739e15381bdbbf00f7819 303 SUPERFAMILY SSF161098 31 303 1.96E-58 T 14-10-2018 IPR035906 MetI-like superfamily PACID_03930 bb4a05e7d394d698b4e9d2e1de92ff4e 454 Pfam PF00872 Transposase, Mutator family 44 415 1.4E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_07220 6d6aa40918b537d35efe03af724c4bd5 132 Pfam PF04892 VanZ like family 53 120 2.4E-13 T 14-10-2018 IPR006976 VanZ-like PACID_20160 1f9518d4c49b037df14d4409b795d4c2 310 Pfam PF06114 IrrE N-terminal-like domain 163 230 7.7E-6 T 14-10-2018 IPR010359 IrrE N-terminal-like domain PACID_23970 b687c57fa61bfaae696229261dce80a6 82 Pfam PF11238 Protein of unknown function (DUF3039) 23 78 2.5E-30 T 14-10-2018 IPR021400 Protein of unknown function DUF3039 PACID_15010 e84bded076218d9ba1530880800835e8 408 Gene3D G3DSA:1.10.10.2840 281 408 1.3E-37 T 14-10-2018 PACID_15010 e84bded076218d9ba1530880800835e8 408 Pfam PF13556 PucR C-terminal helix-turn-helix domain 345 402 3.2E-19 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain PACID_10810 25eae03f8f8101f9b685d637e58f098f 109 Gene3D G3DSA:3.30.460.10 12 109 9.8E-17 T 14-10-2018 PACID_10810 25eae03f8f8101f9b685d637e58f098f 109 SUPERFAMILY SSF81301 12 95 1.71E-15 T 14-10-2018 PACID_10810 25eae03f8f8101f9b685d637e58f098f 109 Pfam PF01909 Nucleotidyltransferase domain 27 86 9.4E-9 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 PACID_22320 47cb3ecbfee9c0863b9ea80f48e5c47e 126 Pfam PF11298 Protein of unknown function (DUF3099) 23 87 8.2E-21 T 14-10-2018 IPR021449 Protein of unknown function DUF3099 PACID_30690 9fffd73f1f5138a1fb374dcf4f74173c 173 Gene3D G3DSA:3.90.960.10 26 169 2.5E-24 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_30690 9fffd73f1f5138a1fb374dcf4f74173c 173 Pfam PF04073 Aminoacyl-tRNA editing domain 38 159 2.5E-17 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 PACID_30690 9fffd73f1f5138a1fb374dcf4f74173c 173 SUPERFAMILY SSF55826 31 169 9.94E-24 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 PACID_29840 a286718a8f802f4b0d5d452c0d3df8e8 355 Gene3D G3DSA:3.40.50.2000 165 322 7.0E-7 T 14-10-2018 PACID_29840 a286718a8f802f4b0d5d452c0d3df8e8 355 SUPERFAMILY SSF53756 116 316 2.32E-9 T 14-10-2018 PACID_15240 09ab58f09beec5450f18da8285d28db4 64 Pfam PF11248 Protein of unknown function (DUF3046) 1 62 1.5E-21 T 14-10-2018 IPR021408 Protein of unknown function DUF3046 PACID_34270 b34028241313ce1c4d2d8b40b1073dc5 454 Pfam PF00872 Transposase, Mutator family 45 415 1.3E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_08700 c3097cec8537f2323ba76f0ba1899bca 250 PIRSF PIRSF006648 1 249 2.7E-15 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 PACID_21470 f0aec28f90d66f32122e7d46781b9db7 251 Pfam PF04138 GtrA-like protein 135 235 9.9E-13 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 PACID_30400 68793a0dff9aba7cc3a05ec73d1b9b70 251 Pfam PF03591 AzlC protein 26 162 4.5E-33 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease PACID_05290 4ebdfbf3144a303f4325d91d3ef4522c 504 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 483 5.2E-163 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PACID_05290 4ebdfbf3144a303f4325d91d3ef4522c 504 PIRSF PIRSF006446 1 501 4.9E-131 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 PACID_30500 9bb56faf74a6e0d9ccc5709d6ad81ffd 213 Gene3D G3DSA:1.10.3720.10 6 204 8.0E-26 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30500 9bb56faf74a6e0d9ccc5709d6ad81ffd 213 SUPERFAMILY SSF161098 9 194 3.92E-29 T 14-10-2018 IPR035906 MetI-like superfamily PACID_30500 9bb56faf74a6e0d9ccc5709d6ad81ffd 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 209 5.7E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_30450 15071ae5a3fbb14c581f1ef1e56056ee 97 PIRSF PIRSF006909 1 97 8.3E-55 T 14-10-2018 IPR014447 Uncharacterised conserved protein UCP006909 PACID_18710 9224e2dbd2478b6077fe0ffd51a0c0b5 274 Gene3D G3DSA:1.10.443.10 116 273 2.9E-30 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 PACID_18710 9224e2dbd2478b6077fe0ffd51a0c0b5 274 SUPERFAMILY SSF56349 18 270 1.8E-30 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 PACID_18710 9224e2dbd2478b6077fe0ffd51a0c0b5 274 Pfam PF00589 Phage integrase family 124 260 4.4E-19 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 PACID_13550 b7322fe62b98fcff0a08dd2ab9e4d2e4 120 PIRSF PIRSF033199 6 120 6.1E-48 T 14-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 PACID_13550 b7322fe62b98fcff0a08dd2ab9e4d2e4 120 Gene3D G3DSA:1.10.8.290 4 120 3.9E-51 T 14-10-2018 IPR023204 SP1917 domain superfamily PACID_13550 b7322fe62b98fcff0a08dd2ab9e4d2e4 120 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 10 119 5.7E-51 T 14-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 PACID_00420 8c599888a15c7a72a88b5dc2ad925871 179 Pfam PF00583 Acetyltransferase (GNAT) family 46 136 8.5E-13 T 14-10-2018 IPR000182 GNAT domain PACID_00420 8c599888a15c7a72a88b5dc2ad925871 179 SUPERFAMILY SSF55729 3 142 7.58E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_00420 8c599888a15c7a72a88b5dc2ad925871 179 Gene3D G3DSA:3.40.630.30 1 151 1.7E-23 T 14-10-2018 PACID_01130 90a589ac70ca6f6d265fd5da11fe8a9b 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 285 1.7E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_01130 90a589ac70ca6f6d265fd5da11fe8a9b 294 Gene3D G3DSA:1.10.3720.10 14 285 5.0E-64 T 14-10-2018 IPR035906 MetI-like superfamily PACID_01130 90a589ac70ca6f6d265fd5da11fe8a9b 294 SUPERFAMILY SSF161098 22 294 1.7E-68 T 14-10-2018 IPR035906 MetI-like superfamily PACID_05700 a339d4c604e52c7f151339e003180483 480 Pfam PF01098 Cell cycle protein 90 447 1.8E-71 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 PACID_30530 767592988b8d8bbee0717d177758fa9e 507 Gene3D G3DSA:3.40.710.10 5 358 1.3E-63 T 14-10-2018 PACID_30530 767592988b8d8bbee0717d177758fa9e 507 SUPERFAMILY SSF56601 13 366 1.17E-54 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like PACID_30530 767592988b8d8bbee0717d177758fa9e 507 Pfam PF00144 Beta-lactamase 28 361 1.1E-47 T 14-10-2018 IPR001466 Beta-lactamase-related PACID_09050 a95ddc28a52535f2e8f96bbceab92812 93 Pfam PF11662 Protein of unknown function (DUF3263) 14 88 4.6E-28 T 14-10-2018 IPR021678 Protein of unknown function DUF3263 PACID_08310 bc9caba726185d77173b49bb3a4871f6 315 Pfam PF04228 Putative neutral zinc metallopeptidase 106 307 8.3E-25 T 14-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative PACID_08310 bc9caba726185d77173b49bb3a4871f6 315 SUPERFAMILY SSF55486 66 200 9.33E-5 T 14-10-2018 PACID_17850 65ff3eb78b9be0ea509a859429c73791 267 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 158 168 - T 14-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 PACID_17850 65ff3eb78b9be0ea509a859429c73791 267 Gene3D G3DSA:3.90.190.10 15 266 1.2E-51 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like PACID_17850 65ff3eb78b9be0ea509a859429c73791 267 SUPERFAMILY SSF52799 15 265 2.86E-41 T 14-10-2018 IPR029021 Protein-tyrosine phosphatase-like PACID_17850 65ff3eb78b9be0ea509a859429c73791 267 Pfam PF13350 Tyrosine phosphatase family 15 265 1.9E-52 T 14-10-2018 IPR026893 Tyrosine/serine-protein phosphatase IphP-type PACID_17520 f2da4385afe160ad6e291df6019bc5d4 136 Pfam PF11255 Protein of unknown function (DUF3054) 23 125 1.2E-30 T 14-10-2018 IPR021414 Protein of unknown function DUF3054 PACID_32910 8213e1529a1a0ad2a523685fcf51d6cc 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 310 5.9E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 PACID_32910 8213e1529a1a0ad2a523685fcf51d6cc 317 SUPERFAMILY SSF161098 76 303 2.35E-57 T 14-10-2018 IPR035906 MetI-like superfamily PACID_32910 8213e1529a1a0ad2a523685fcf51d6cc 317 Gene3D G3DSA:1.10.3720.10 72 314 4.8E-68 T 14-10-2018 IPR035906 MetI-like superfamily PACID_29100 e382357fd57f0b7870f6808a5ab9aeb5 223 Pfam PF00293 NUDIX domain 43 164 4.4E-13 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 PACID_29100 e382357fd57f0b7870f6808a5ab9aeb5 223 Gene3D G3DSA:3.90.79.10 24 198 6.5E-36 T 14-10-2018 PACID_29100 e382357fd57f0b7870f6808a5ab9aeb5 223 SUPERFAMILY SSF55811 36 196 1.9E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 PACID_10840 7cb9fdd48d851f94c60e104df68107c0 269 Gene3D G3DSA:3.40.630.30 12 260 2.7E-34 T 14-10-2018 PACID_10840 7cb9fdd48d851f94c60e104df68107c0 269 SUPERFAMILY SSF55729 81 259 3.42E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_30640 444db44f1cd3869a98501759486e73c9 249 TIGRFAM TIGR03941 tRNA_deam_assoc: putative tRNA adenosine deaminase-associated protein 99 243 2.5E-36 T 14-10-2018 IPR023869 tRNA adenosine deaminase-associated protein, putative PACID_33370 0d57e0b80c3f1993bb05e92f6b2f1f2c 251 Pfam PF13280 WYL domain 70 240 7.5E-16 T 14-10-2018 IPR026881 WYL domain PACID_23510 134ccd44c79529d9b233a0782b5e2b4f 190 Gene3D G3DSA:3.40.50.150 1 190 9.4E-51 T 14-10-2018 PACID_23510 134ccd44c79529d9b233a0782b5e2b4f 190 SUPERFAMILY SSF53335 3 162 1.05E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase PACID_23510 134ccd44c79529d9b233a0782b5e2b4f 190 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 3 188 4.0E-34 T 14-10-2018 PACID_23500 154a1346a21a01fdf392937d2f45d08a 94 Pfam PF11373 Protein of unknown function (DUF3175) 7 90 1.7E-40 T 14-10-2018 IPR021513 Ralstonia phage RSL1, Orf186 PACID_01440 50e74e042d8bba3c768abbddd915b9d6 828 Pfam PF02687 FtsX-like permease family 726 817 5.1E-11 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_01440 50e74e042d8bba3c768abbddd915b9d6 828 Pfam PF02687 FtsX-like permease family 279 369 7.9E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 PACID_01440 50e74e042d8bba3c768abbddd915b9d6 828 Pfam PF12704 MacB-like periplasmic core domain 18 207 1.8E-14 T 14-10-2018 IPR025857 MacB-like periplasmic core domain PACID_30460 9246be7a42f441d479074aedb67b0c58 181 Gene3D G3DSA:3.30.70.2390 60 142 2.7E-7 T 14-10-2018 PACID_30460 9246be7a42f441d479074aedb67b0c58 181 Pfam PF13399 LytR cell envelope-related transcriptional attenuator 61 145 6.5E-14 T 14-10-2018 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain PACID_30020 7cd8015e265a58ccaa8bb0047929d74f 210 Pfam PF09335 SNARE associated Golgi protein 45 169 1.0E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein PACID_12050 58a29d1aef8a0165e74fbb94d251a06d 222 Pfam PF09335 SNARE associated Golgi protein 40 159 3.5E-20 T 14-10-2018 IPR032816 SNARE associated Golgi protein PACID_18750 dd75e27a9783667fefcc7a3d6b04aa58 124 Gene3D G3DSA:1.10.1220.180 35 95 8.9E-7 T 14-10-2018 PACID_34220 386c1b1ff40339a5dae18c4e583762b6 261 Pfam PF02104 SURF1 family 30 227 8.8E-21 T 14-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 PACID_05650 205029ac571c2b0ab55164da372d2e17 124 Hamap MF_00631 Cell division protein CrgA [crgA]. 1 124 18.109 T 14-10-2018 IPR009619 Cell division protein CrgA PACID_05650 205029ac571c2b0ab55164da372d2e17 124 Pfam PF06781 Cell division protein CrgA 36 124 2.3E-21 T 14-10-2018 IPR009619 Cell division protein CrgA PACID_04700 7f17432b1f74efe928f78435ed5f239b 471 Pfam PF04932 O-Antigen ligase 215 350 2.0E-10 T 14-10-2018 IPR007016 O-antigen ligase-related PACID_19940 3b5ed0954b80d20e536e847870b8e4df 249 Pfam PF13398 Peptidase M50B-like 31 229 1.1E-39 T 14-10-2018 PACID_13670 8f1ae75d25c373ff515b36194bf20208 321 SUPERFAMILY SSF53300 67 264 1.19E-5 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily PACID_27660 d760d2439cf7a01969a15c35d410cb6c 454 Pfam PF00872 Transposase, Mutator family 44 415 1.4E-133 T 14-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 PACID_28830 0dd4e45216599da960c07b8d7a3d1297 300 Pfam PF04468 PSP1 C-terminal conserved region 68 147 1.5E-10 T 14-10-2018 IPR007557 PSP1, C-terminal PACID_33230 5347109467a539d7345b3d2082e3839c 336 Pfam PF01925 Sulfite exporter TauE/SafE 39 333 6.9E-18 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PACID_04120 ac3511f2602dfaab289685486477e14f 175 Gene3D G3DSA:3.40.630.30 12 167 1.4E-8 T 14-10-2018 PACID_04120 ac3511f2602dfaab289685486477e14f 175 SUPERFAMILY SSF55729 41 158 1.88E-7 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase PACID_28630 4883918bfa54cfbf71edba01c54781ef 356 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 116 305 4.2E-12 T 14-10-2018 IPR005079 Peptidase C45 PACID_28630 4883918bfa54cfbf71edba01c54781ef 356 Gene3D G3DSA:3.60.60.10 93 343 2.4E-27 T 14-10-2018 PACID_16860 16ff49aa69e0811986f6666c956e5adc 69 Pfam PF04328 Selenoprotein, putative 12 69 5.7E-19 T 14-10-2018 IPR007423 Selenoprotein, putative PACID_04300 215bce5bc61528f96aa6397feba5373c 142 Pfam PF14016 Protein of unknown function (DUF4232) 12 138 4.7E-27 T 14-10-2018 IPR025326 Protein of unknown function DUF4232 PACID_16840 3690d48613d2bda28f75943a1edf7c12 391 Gene3D G3DSA:3.30.70.2330 69 135 5.9E-6 T 14-10-2018 PACID_10400 7b19e8fbd1c4f03067eafc63e181719e 146 Pfam PF14155 Domain of unknown function (DUF4307) 32 142 3.7E-29 T 14-10-2018 IPR025443 Protein of unknown function DUF4307 PACID_34020 de9daeb5e07bd56690127c77dee8ec7e 318 Pfam PF03601 Conserved hypothetical protein 698 6 299 3.0E-70 T 14-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 PACID_09710 844a265e0c946f1c6c37462b51fa78d1 213 Pfam PF06736 Protein of unknown function (DUF1211) 23 110 8.4E-18 T 14-10-2018 IPR010617 Endosomal/lysomomal potassium channel TMEM175 GO:0005267 PACID_16360 37c8b6217797f20b2c66f043b280e22e 198 Pfam PF11452 Protein of unknown function (DUF3000) 12 185 2.9E-63 T 14-10-2018 IPR021555 Protein of unknown function DUF3000 PACID_19630 a84dffea2b95a8cb71c8869544eafffd 383 Pfam PF00953 Glycosyl transferase family 4 83 241 1.6E-35 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 PACID_16230 d06f41737c9a0590a109cf6fbc98db58 88 Pfam PF14019 Protein of unknown function (DUF4235) 8 83 1.5E-17 T 14-10-2018 IPR025329 Protein of unknown function DUF4235 PACID_17940 c1fe78cf593b8a330d6f6fb17eecff59 414 Pfam PF03993 Domain of Unknown Function (DUF349) 249 323 3.3E-17 T 14-10-2018 IPR007139 Protein of unknown function DUF349 PACID_17940 c1fe78cf593b8a330d6f6fb17eecff59 414 Pfam PF03993 Domain of Unknown Function (DUF349) 96 166 4.9E-9 T 14-10-2018 IPR007139 Protein of unknown function DUF349 PACID_17940 c1fe78cf593b8a330d6f6fb17eecff59 414 Pfam PF03993 Domain of Unknown Function (DUF349) 172 245 5.4E-21 T 14-10-2018 IPR007139 Protein of unknown function DUF349 PACID_08880 5b762740902765c75c46b66c57c60ee4 146 Pfam PF02553 Cobalt transport protein component CbiN 23 91 3.2E-20 T 14-10-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 PACID_29150 74b3e1095008a4747dbd1501599b3dc0 58 Pfam PF13783 Domain of unknown function (DUF4177) 16 37 7.4E-6 T 14-10-2018 IPR025234 Protein of unknown function DUF4177 PACID_05550 8379b13af94db7aeaea484a5f21fdb45 250 Pfam PF01925 Sulfite exporter TauE/SafE 10 244 9.0E-41 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 PACID_12160 af633193590dd591d4848c1c2fa9d7ee 223 Pfam PF11241 Protein of unknown function (DUF3043) 56 215 1.8E-40 T 14-10-2018 IPR021403 Protein of unknown function DUF3043 PACID_30410 71c7dd5fd204542b1e03509ab83f5cad 101 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 3 97 4.1E-18 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD PACID_24050 d558a2a0c98258013d95287877afe67b 1104 Gene3D G3DSA:3.90.550.10 56 289 2.3E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_24050 d558a2a0c98258013d95287877afe67b 1104 SUPERFAMILY SSF53448 46 290 1.13E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases PACID_03810 4ad055208c33ea103e199bbe71dd9d78 156 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 135 6.0E-15 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 PACID_03810 4ad055208c33ea103e199bbe71dd9d78 156 Gene3D G3DSA:3.40.50.720 10 141 8.9E-17 T 14-10-2018 PACID_03810 4ad055208c33ea103e199bbe71dd9d78 156 SUPERFAMILY SSF51735 12 138 1.89E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily PACID_09190 b9d652bd07761b2f0332259cb617b1ef 95 Pfam PF10745 Protein of unknown function (DUF2530) 36 83 1.3E-7 T 14-10-2018 IPR019681 Protein of unknown function DUF2530 PACID_02350 42aa689f7fda51fcfedbfb8d6c5957a9 124 Pfam PF04343 Protein of unknown function, DUF488 16 116 2.1E-27 T 14-10-2018 IPR007438 Protein of unknown function DUF488 PACID_21430 f04b0e5c17c858d6a16ad80a74cec97c 121 SUPERFAMILY SSF103481 36 120 2.48E-10 T 14-10-2018 PACID_16590 805338f95679a5d6c99eb58609bb0528 110 PIRSF PIRSF018579 1 110 5.4E-43 T 14-10-2018 IPR009709 Protein of unknown function DUF1290 PACID_16590 805338f95679a5d6c99eb58609bb0528 110 Pfam PF06947 Protein of unknown function (DUF1290) 21 108 5.0E-33 T 14-10-2018 IPR009709 Protein of unknown function DUF1290 PACID_00720 0e7138e7128cba9ec7e6d675ee65cdde 257 Pfam PF13359 DDE superfamily endonuclease 104 250 4.1E-18 T 14-10-2018 IPR027806 Harbinger transposase-derived nuclease domain PACID_17390 bd843bdf0221696f73e563be984918fd 357 Pfam PF01610 Transposase 85 340 2.6E-65 T 14-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain PACID_08210 fd6d1eef386c871683b2383e7dbee8d5 137 Pfam PF06923 Glucitol operon activator protein (GutM) 6 93 6.6E-16 T 14-10-2018 IPR009693 Glucitol operon activator PACID_17820 1ffe06b9432620a9e575ca9dd1ae280b 134 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 86 5.5E-17 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 PACID_16240 597b8a815ac073dcb9098af16b15c0b4 178 Pfam PF11292 Protein of unknown function (DUF3093) 16 156 4.3E-40 T 14-10-2018 IPR021443 Protein of unknown function DUF3093 PACID_06510 f173268fb23e377b2dc257511f284b31 162 Pfam PF03703 Bacterial PH domain 75 151 8.5E-13 T 14-10-2018 IPR005182 Domain of unknown function DUF304 PACID_15030 de95acd10e35068e3e8ef89249dac581 147 Pfam PF11253 Protein of unknown function (DUF3052) 21 143 1.6E-45 T 14-10-2018 IPR021412 Protein of unknown function DUF3052 PACID_34310 9d1096948ac35be4ce4360618032edaf 363 Pfam PF02096 60Kd inner membrane protein 52 265 1.1E-57 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 PACID_34310 9d1096948ac35be4ce4360618032edaf 363 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 52 266 6.2E-64 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 PACID_12910 9ee37ac1a36d3e5252a78f1b6599e9c5 96 Pfam PF02325 YGGT family 10 90 3.0E-14 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 PACID_10660 e934705b17a274b4109f2c0f767d10f9 1002 SUPERFAMILY SSF56672 444 697 2.0E-11 T 14-10-2018 PACID_24020 11a18573759bb414b1632bdb90c23d23 130 Pfam PF12005 Protein of unknown function (DUF3499) 1 120 9.3E-41 T 14-10-2018 IPR021888 Protein of unknown function DUF3499 PACID_21270 a0f4a0193c87d5d704e69d64b60182e8 102 Pfam PF10611 Protein of unknown function (DUF2469) 1 100 8.6E-49 T 14-10-2018 IPR019592 Protein of unknown function DUF2469 PACID_20220 255a7599db2768ba530cc5c2fe9c8259 362 Pfam PF06224 Winged helix DNA-binding domain 8 339 3.0E-56 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 PACID_02870 5a8f0b83300c3f7f84e4271e39bbb92b 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 319 1.8E-41 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_11680 0ede4b7a61a3edd1bfa1a3ec26588603 55 Pfam PF11314 Protein of unknown function (DUF3117) 4 52 3.7E-30 T 14-10-2018 IPR021465 Protein of unknown function DUF3117 PACID_14050 fbb7d3580e253bcd0c0d3cb2214e7f31 285 Pfam PF11296 Protein of unknown function (DUF3097) 4 277 3.4E-111 T 14-10-2018 IPR021447 Protein of unknown function DUF3097 PACID_28800 2daccc229a7a5d7008fb3815af876463 566 Pfam PF05960 Bacterial protein of unknown function (DUF885) 35 564 4.6E-153 T 14-10-2018 IPR010281 Protein of unknown function DUF885 PACID_19550 4a9039596dfc10045c7a1c617cbd5c2a 446 Pfam PF04932 O-Antigen ligase 232 350 1.4E-6 T 14-10-2018 IPR007016 O-antigen ligase-related PACID_27390 966278bb5f52efe4b8ce5e4a40e68c09 233 Pfam PF11349 Protein of unknown function (DUF3151) 15 142 6.1E-50 T 14-10-2018 IPR014487 Protein of unknown function DUF3151 PACID_30570 c1ffdf2f691a2d96eb1df4879404d39c 318 SUPERFAMILY SSF103481 61 161 2.09E-5 T 14-10-2018 PACID_04630 652b18c70d54e50dc16a02cce1c1fcc3 145 Pfam PF04138 GtrA-like protein 10 118 8.1E-18 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 PACID_20120 79c953ee7f163ead35bae39588492d73 75 Pfam PF11305 Protein of unknown function (DUF3107) 1 73 1.6E-27 T 14-10-2018 IPR021456 Protein of unknown function DUF3107 PACID_16050 a04415b99f0ec8a0792b1136f3c02a33 219 Pfam PF08044 Domain of unknown function (DUF1707) 8 60 2.8E-17 T 14-10-2018 IPR012551 Protein of unknown function DUF1707 PACID_15460 c08100ca14ab0727c9343baa7d556d15 212 Pfam PF04586 Caudovirus prohead serine protease 22 180 2.8E-14 T 14-10-2018 IPR006433 Prohead protease PACID_06330 4053704a3faa8a0de5265a594d399417 462 Pfam PF13701 Transposase DDE domain group 1 4 458 5.1E-88 T 14-10-2018 IPR025668 Transposase DDE domain PACID_02880 9f76c0b8ca10d0d91e66048107d29a23 351 Pfam PF02653 Branched-chain amino acid transport system / permease component 84 342 8.4E-38 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 PACID_05230 5a94da75170a1f02f712d8219b7a579a 265 Pfam PF02754 Cysteine-rich domain 155 239 1.8E-14 T 14-10-2018 IPR004017 Cysteine-rich domain PACID_05230 5a94da75170a1f02f712d8219b7a579a 265 Pfam PF02754 Cysteine-rich domain 24 104 2.4E-14 T 14-10-2018 IPR004017 Cysteine-rich domain PACID_04580 87592f4853bffe11ccc41c9a2f8e5e9a 501 PIRSF PIRSF010361 1 461 3.4E-86 T 14-10-2018 IPR016570 Uncharacterised conserved protein UCP010361, membrane PACID_24340 493762e124ae62001d27008f282e5983 607 Pfam PF09972 Predicted membrane protein (DUF2207) 35 531 5.0E-80 T 14-10-2018 IPR018702 Protein of unknown function DUF2207, membrane PACID_18270 5256802ee37e293f4bbc411bc91e3fbe 198 Pfam PF09534 Tryptophan-associated transmembrane protein (Trp_oprn_chp) 24 183 2.0E-20 T 14-10-2018 IPR019051 Trp biosynthesis associated, transmembrane protein, Oprn/Chp PACID_04080 c829065a4c5469ba4533255f02c32b3e 109 Gene3D G3DSA:1.20.120.450 5 92 2.1E-5 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes