locus-tag class description ASQ49_00060 PF02195 ParB-like nuclease domain ASQ49_00070 PF01551 Peptidase family M23 ASQ49_00070 PF10145 Phage-related minor tail protein ASQ49_00070 PF01464 Transglycosylase SLT domain ASQ49_00170 PF01812 5-formyltetrahydrofolate cyclo-ligase family ASQ49_00185 PF01741 Large-conductance mechanosensitive channel, MscL ASQ49_00205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_00205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_00210 PF00083 Sugar (and other) transporter ASQ49_00215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_00215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_00220 PF00356 Bacterial regulatory proteins, lacI family ASQ49_00230 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASQ49_00230 PF00205 Thiamine pyrophosphate enzyme, central domain ASQ49_00230 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASQ49_00235 PF04962 KduI/IolB family ASQ49_00245 PF00294 pfkB family carbohydrate kinase ASQ49_00250 PF00923 Transaldolase/Fructose-6-phosphate aldolase ASQ49_00255 PF00085 Thioredoxin ASQ49_00260 PF01209 ubiE/COQ5 methyltransferase family ASQ49_00265 PF18357 Diphteria toxin repressor SH3 domain ASQ49_00265 PF02742 Iron dependent repressor, metal binding and dimerisation domain ASQ49_00265 PF01325 Iron dependent repressor, N-terminal DNA binding domain ASQ49_00270 PF01979 Amidohydrolase family ASQ49_00275 PF00266 Aminotransferase class-V ASQ49_00290 PF00860 Permease family ASQ49_00305 PF00313 'Cold-shock' DNA-binding domain ASQ49_00310 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ASQ49_00330 PF03932 CutC family ASQ49_00355 PF00118 TCP-1/cpn60 chaperonin family ASQ49_00365 PF01238 Phosphomannose isomerase type I ASQ49_00370 PF02664 S-Ribosylhomocysteinase (LuxS) ASQ49_00390 PF02654 Cobalamin-5-phosphate synthase ASQ49_00395 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ASQ49_00400 PF02277 Phosphoribosyltransferase ASQ49_00405 PF02571 Precorrin-6x reductase CbiJ/CobK ASQ49_00410 PF10414 Sirohaem synthase dimerisation region ASQ49_00410 PF14824 Sirohaem biosynthesis protein central ASQ49_00410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_00415 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ASQ49_00415 PF07685 CobB/CobQ-like glutamine amidotransferase domain ASQ49_00420 PF12557 Cob(I)alamin adenosyltransferase N terminal ASQ49_00420 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ASQ49_00425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_00430 PF00005 ABC transporter ASQ49_00435 PF02361 Cobalt transport protein ASQ49_00440 PF02553 Cobalt transport protein component CbiN ASQ49_00445 PF01891 Cobalt uptake substrate-specific transmembrane region ASQ49_00450 PF02570 Precorrin-8X methylmutase ASQ49_00460 PF14824 Sirohaem biosynthesis protein central ASQ49_00460 PF10414 Sirohaem synthase dimerisation region ASQ49_00460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_00465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_00465 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ASQ49_00470 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_00475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_00480 PF07685 CobB/CobQ-like glutamine amidotransferase domain ASQ49_00480 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ASQ49_00485 PF17113 Regulatory signalling modulator protein AmpE ASQ49_00485 PF03186 CobD/Cbib protein ASQ49_00490 PF00196 Bacterial regulatory proteins, luxR family ASQ49_00490 PF00072 Response regulator receiver domain ASQ49_00495 PF07730 Histidine kinase ASQ49_00500 PF00005 ABC transporter ASQ49_00515 PF00300 Histidine phosphatase superfamily (branch 1) ASQ49_00520 PF00809 Pterin binding enzyme ASQ49_00525 PF00072 Response regulator receiver domain ASQ49_00525 PF00196 Bacterial regulatory proteins, luxR family ASQ49_00530 PF07730 Histidine kinase ASQ49_00540 PF00005 ABC transporter ASQ49_00545 PF01661 Macro domain ASQ49_00555 PF00155 Aminotransferase class I and II ASQ49_00560 PF00107 Zinc-binding dehydrogenase ASQ49_00560 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_00565 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_00570 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_00575 PF01547 Bacterial extracellular solute-binding protein ASQ49_00580 PF00480 ROK family ASQ49_00585 PF03313 Serine dehydratase alpha chain ASQ49_00585 PF03315 Serine dehydratase beta chain ASQ49_00595 PF13419 Haloacid dehalogenase-like hydrolase ASQ49_00605 PF07690 Major Facilitator Superfamily ASQ49_00610 PF00005 ABC transporter ASQ49_00610 PF17912 MalK OB fold domain ASQ49_00610 PF03459 TOBE domain ASQ49_00660 PF03780 Asp23 family, cell envelope-related function ASQ49_00665 PF01053 Cys/Met metabolism PLP-dependent enzyme ASQ49_00680 PF09190 DALR domain ASQ49_00680 PF01406 tRNA synthetases class I (C) catalytic domain ASQ49_00685 PF08032 RNA 2'-O ribose methyltransferase substrate binding ASQ49_00685 PF00588 SpoU rRNA Methylase family ASQ49_00690 PF08241 Methyltransferase domain ASQ49_00695 PF07690 Major Facilitator Superfamily ASQ49_00700 PF00464 Serine hydroxymethyltransferase ASQ49_00720 PF02542 YgbB family ASQ49_00725 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ASQ49_00735 PF04198 Putative sugar-binding domain ASQ49_00740 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ASQ49_00740 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ASQ49_00750 PF03611 PTS system sugar-specific permease component ASQ49_00760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASQ49_00765 PF02559 CarD-like/TRCF domain ASQ49_00775 PF00486 Transcriptional regulatory protein, C terminal ASQ49_00775 PF00072 Response regulator receiver domain ASQ49_00780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_00780 PF00512 His Kinase A (phospho-acceptor) domain ASQ49_00785 PF01895 PhoU domain ASQ49_00790 PF00300 Histidine phosphatase superfamily (branch 1) ASQ49_00795 PF00381 PTS HPr component phosphorylation site ASQ49_00800 PF02896 PEP-utilising enzyme, TIM barrel domain ASQ49_00800 PF00391 PEP-utilising enzyme, mobile domain ASQ49_00800 PF05524 PEP-utilising enzyme, N-terminal ASQ49_00805 PF00106 short chain dehydrogenase ASQ49_00810 PF00364 Biotin-requiring enzyme ASQ49_00815 PF01039 Carboxyl transferase domain ASQ49_00820 PF01039 Carboxyl transferase domain ASQ49_00825 PF00682 HMGL-like ASQ49_00825 PF02436 Conserved carboxylase domain ASQ49_00830 PF01116 Fructose-bisphosphate aldolase class-II ASQ49_00845 PF09335 SNARE associated Golgi protein ASQ49_00865 PF13614 AAA domain ASQ49_00890 PF00534 Glycosyl transferases group 1 ASQ49_00890 PF13439 Glycosyltransferase Family 4 ASQ49_00910 PF00294 pfkB family carbohydrate kinase ASQ49_00910 PF01467 Cytidylyltransferase-like ASQ49_00915 PF04011 LemA family ASQ49_00935 PF00155 Aminotransferase class I and II ASQ49_00945 PF05199 GMC oxidoreductase ASQ49_00945 PF00732 GMC oxidoreductase ASQ49_00950 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_00955 PF00571 CBS domain ASQ49_00955 PF00005 ABC transporter ASQ49_00960 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_00975 PF00005 ABC transporter ASQ49_00980 PF00155 Aminotransferase class I and II ASQ49_00980 PF00392 Bacterial regulatory proteins, gntR family ASQ49_00995 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_01000 PF00571 CBS domain ASQ49_01000 PF00005 ABC transporter ASQ49_01005 PF02810 SEC-C motif ASQ49_01025 PF00872 Transposase, Mutator family ASQ49_01045 PF02384 N-6 DNA Methylase ASQ49_01055 PF18766 SWI2/SNF2 ATPase ASQ49_01055 PF11867 Domain of unknown function (DUF3387) ASQ49_01055 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ASQ49_01065 PF05368 NmrA-like family ASQ49_01070 PF17926 Tetracyclin repressor-like, C-terminal domain ASQ49_01070 PF00440 Bacterial regulatory proteins, tetR family ASQ49_01095 PF02056 Family 4 glycosyl hydrolase ASQ49_01095 PF11975 Family 4 glycosyl hydrolase C-terminal domain ASQ49_01100 PF08220 DeoR-like helix-turn-helix domain ASQ49_01100 PF00455 DeoR C terminal sensor domain ASQ49_01105 PF00294 pfkB family carbohydrate kinase ASQ49_01115 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_01120 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_01125 PF10431 C-terminal, D2-small domain, of ClpB protein ASQ49_01125 PF02861 Clp amino terminal domain, pathogenicity island component ASQ49_01125 PF00004 ATPase family associated with various cellular activities (AAA) ASQ49_01125 PF17871 AAA lid domain ASQ49_01125 PF07724 AAA domain (Cdc48 subfamily) ASQ49_01135 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_01140 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_01150 PF00274 Fructose-bisphosphate aldolase class-I ASQ49_01160 PF01566 Natural resistance-associated macrophage protein ASQ49_01160 PF03358 NADPH-dependent FMN reductase ASQ49_01165 PF03069 Acetamidase/Formamidase family ASQ49_01175 PF07730 Histidine kinase ASQ49_01180 PF00072 Response regulator receiver domain ASQ49_01180 PF00196 Bacterial regulatory proteins, luxR family ASQ49_01190 PF12704 MacB-like periplasmic core domain ASQ49_01190 PF02687 FtsX-like permease family ASQ49_01190 PF00005 ABC transporter ASQ49_01195 PF00005 ABC transporter ASQ49_01195 PF02687 FtsX-like permease family ASQ49_01195 PF12704 MacB-like periplasmic core domain ASQ49_01205 PF00324 Amino acid permease ASQ49_01210 PF02080 TrkA-C domain ASQ49_01210 PF06826 Predicted Permease Membrane Region ASQ49_01215 PF03306 Alpha-acetolactate decarboxylase ASQ49_01220 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_01220 PF00107 Zinc-binding dehydrogenase ASQ49_01225 PF13411 MerR HTH family regulatory protein ASQ49_01230 PF00684 DnaJ central domain ASQ49_01230 PF00226 DnaJ domain ASQ49_01230 PF01556 DnaJ C terminal domain ASQ49_01235 PF01025 GrpE ASQ49_01240 PF00012 Hsp70 protein ASQ49_01250 PF01384 Phosphate transporter family ASQ49_01255 PF00486 Transcriptional regulatory protein, C terminal ASQ49_01255 PF00072 Response regulator receiver domain ASQ49_01260 PF00512 His Kinase A (phospho-acceptor) domain ASQ49_01260 PF00672 HAMP domain ASQ49_01260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_01265 PF01791 DeoC/LacD family aldolase ASQ49_01280 PF00391 PEP-utilising enzyme, mobile domain ASQ49_01280 PF02896 PEP-utilising enzyme, TIM barrel domain ASQ49_01280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ASQ49_01285 PF03618 Kinase/pyrophosphorylase ASQ49_01290 PF05175 Methyltransferase small domain ASQ49_01300 PF01263 Aldose 1-epimerase ASQ49_01305 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ASQ49_01305 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ASQ49_01315 PF00440 Bacterial regulatory proteins, tetR family ASQ49_01320 PF00005 ABC transporter ASQ49_01340 PF00005 ABC transporter ASQ49_01340 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_01345 PF01425 Amidase ASQ49_01355 PF00440 Bacterial regulatory proteins, tetR family ASQ49_01360 PF07690 Major Facilitator Superfamily ASQ49_01395 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_01400 PF00206 Lyase ASQ49_01400 PF10415 Fumarase C C-terminus ASQ49_01405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_01405 PF00005 ABC transporter ASQ49_01410 PF12911 N-terminal TM domain of oligopeptide transport permease C ASQ49_01410 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_01425 PF00356 Bacterial regulatory proteins, lacI family ASQ49_01445 PF07690 Major Facilitator Superfamily ASQ49_01465 PF00356 Bacterial regulatory proteins, lacI family ASQ49_01470 PF05336 L-rhamnose mutarotase ASQ49_01480 PF01261 Xylose isomerase-like TIM barrel ASQ49_01485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_01485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_01490 PF00596 Class II Aldolase and Adducin N-terminal domain ASQ49_01495 PF00171 Aldehyde dehydrogenase family ASQ49_01510 PF00083 Sugar (and other) transporter ASQ49_01525 PF00480 ROK family ASQ49_01530 PF03485 Arginyl tRNA synthetase N terminal domain ASQ49_01530 PF05746 DALR anticodon binding domain ASQ49_01530 PF00750 tRNA synthetases class I (R) ASQ49_01535 PF00248 Aldo/keto reductase family ASQ49_01540 PF07690 Major Facilitator Superfamily ASQ49_01545 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ASQ49_01555 PF00342 Phosphoglucose isomerase ASQ49_01565 PF00271 Helicase conserved C-terminal domain ASQ49_01565 PF08148 DSHCT (NUC185) domain ASQ49_01565 PF00270 DEAD/DEAH box helicase ASQ49_01575 PF01161 Phosphatidylethanolamine-binding protein ASQ49_01595 PF00248 Aldo/keto reductase family ASQ49_01605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ASQ49_01610 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ASQ49_01620 PF02040 Arsenical pump membrane protein ASQ49_01630 PF03466 LysR substrate binding domain ASQ49_01630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASQ49_01635 PF07690 Major Facilitator Superfamily ASQ49_01640 PF03741 Integral membrane protein TerC family ASQ49_01655 PF03023 Lipid II flippase MurJ ASQ49_01660 PF01842 ACT domain ASQ49_01660 PF00696 Amino acid kinase family ASQ49_01660 PF13840 ACT domain ASQ49_01670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_01680 PF08264 Anticodon-binding domain of tRNA ASQ49_01680 PF00133 tRNA synthetases class I (I, L, M and V) ASQ49_01715 PF02687 FtsX-like permease family ASQ49_01715 PF12704 MacB-like periplasmic core domain ASQ49_01715 PF00005 ABC transporter ASQ49_01725 PF01301 Glycosyl hydrolases family 35 ASQ49_01735 PF01910 Thiamine-binding protein ASQ49_01740 PF02132 RecR protein ASQ49_01740 PF13662 Toprim domain ASQ49_01745 PF02575 YbaB/EbfC DNA-binding family ASQ49_01750 PF12169 DNA polymerase III subunits gamma and tau domain III ASQ49_01790 PF00005 ABC transporter ASQ49_01790 PF13732 Domain of unknown function (DUF4162) ASQ49_01795 PF17933 Tetracyclin repressor-like, C-terminal domain ASQ49_01795 PF00440 Bacterial regulatory proteins, tetR family ASQ49_01800 PF00324 Amino acid permease ASQ49_01810 PF00872 Transposase, Mutator family ASQ49_01815 PF03109 ABC1 family ASQ49_01820 PF03551 Transcriptional regulator PadR-like family ASQ49_01825 PF00083 Sugar (and other) transporter ASQ49_01825 PF07690 Major Facilitator Superfamily ASQ49_01830 PF00128 Alpha amylase, catalytic domain ASQ49_01840 PF00128 Alpha amylase, catalytic domain ASQ49_01840 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ASQ49_01890 PF00534 Glycosyl transferases group 1 ASQ49_01890 PF00862 Sucrose synthase ASQ49_01905 PF13614 AAA domain ASQ49_01910 PF02397 Bacterial sugar transferase ASQ49_01915 PF03816 Cell envelope-related transcriptional attenuator domain ASQ49_01920 PF01451 Low molecular weight phosphotyrosine protein phosphatase ASQ49_01930 PF02397 Bacterial sugar transferase ASQ49_01935 PF00107 Zinc-binding dehydrogenase ASQ49_01935 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_01950 PF00483 Nucleotidyl transferase ASQ49_01955 PF16363 GDP-mannose 4,6 dehydratase ASQ49_01960 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ASQ49_01965 PF12401 Protein of unknown function (DUF2662) ASQ49_01965 PF00498 FHA domain ASQ49_01970 PF16697 Inner membrane component of T3SS, cytoplasmic domain ASQ49_01980 PF01098 Cell cycle protein ASQ49_01985 PF00905 Penicillin binding protein transpeptidase domain ASQ49_01990 PF00069 Protein kinase domain ASQ49_01990 PF03793 PASTA domain ASQ49_01995 PF00117 Glutamine amidotransferase class-I ASQ49_02005 PF06781 Cell division protein CrgA ASQ49_02010 PF01336 OB-fold nucleic acid binding domain ASQ49_02010 PF00152 tRNA synthetases class II (D, K and N) ASQ49_02015 PF01906 Putative heavy-metal-binding ASQ49_02020 PF01177 Asp/Glu/Hydantoin racemase ASQ49_02025 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ASQ49_02030 PF00375 Sodium:dicarboxylate symporter family ASQ49_02035 PF01979 Amidohydrolase family ASQ49_02040 PF00266 Aminotransferase class-V ASQ49_02045 PF01546 Peptidase family M20/M25/M40 ASQ49_02045 PF07687 Peptidase dimerisation domain ASQ49_02060 PF07729 FCD domain ASQ49_02060 PF00392 Bacterial regulatory proteins, gntR family ASQ49_02065 PF02629 CoA binding domain ASQ49_02065 PF00549 CoA-ligase ASQ49_02070 PF06545 Protein of unknown function (DUF1116) ASQ49_02080 PF00696 Amino acid kinase family ASQ49_02095 PF13419 Haloacid dehalogenase-like hydrolase ASQ49_02100 PF00440 Bacterial regulatory proteins, tetR family ASQ49_02105 PF00005 ABC transporter ASQ49_02105 PF00664 ABC transporter transmembrane region ASQ49_02110 PF00664 ABC transporter transmembrane region ASQ49_02110 PF00005 ABC transporter ASQ49_02115 PF00356 Bacterial regulatory proteins, lacI family ASQ49_02120 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_02125 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_02135 PF01301 Glycosyl hydrolases family 35 ASQ49_02140 PF00465 Iron-containing alcohol dehydrogenase ASQ49_02145 PF07690 Major Facilitator Superfamily ASQ49_02170 PF00072 Response regulator receiver domain ASQ49_02170 PF00196 Bacterial regulatory proteins, luxR family ASQ49_02175 PF03965 Penicillinase repressor ASQ49_02180 PF01654 Cytochrome bd terminal oxidase subunit I ASQ49_02185 PF02322 Cytochrome bd terminal oxidase subunit II ASQ49_02190 PF00005 ABC transporter ASQ49_02190 PF00664 ABC transporter transmembrane region ASQ49_02195 PF00005 ABC transporter ASQ49_02195 PF00664 ABC transporter transmembrane region ASQ49_02200 PF02589 LUD domain ASQ49_02205 PF02589 LUD domain ASQ49_02205 PF11870 Domain of unknown function (DUF3390) ASQ49_02205 PF13183 4Fe-4S dicluster domain ASQ49_02210 PF02754 Cysteine-rich domain ASQ49_02215 PF02652 L-lactate permease ASQ49_02220 PF07729 FCD domain ASQ49_02220 PF00392 Bacterial regulatory proteins, gntR family ASQ49_02230 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_02230 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ASQ49_02235 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ASQ49_02235 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ASQ49_02235 PF10371 Domain of unknown function ASQ49_02235 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASQ49_02235 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ASQ49_02240 PF01180 Dihydroorotate dehydrogenase ASQ49_02250 PF03330 Lytic transglycolase ASQ49_02255 PF00403 Heavy-metal-associated domain ASQ49_02265 PF02583 Metal-sensitive transcriptional repressor ASQ49_02270 PF03796 DnaB-like helicase C terminal domain ASQ49_02270 PF00772 DnaB-like helicase N terminal domain ASQ49_02275 PF06965 Na+/H+ antiporter 1 ASQ49_02275 PF13462 Thioredoxin ASQ49_02280 PF00085 Thioredoxin ASQ49_02290 PF00255 Glutathione peroxidase ASQ49_02295 PF01047 MarR family ASQ49_02300 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_02300 PF00107 Zinc-binding dehydrogenase ASQ49_02315 PF02245 Methylpurine-DNA glycosylase (MPG) ASQ49_02330 PF00270 DEAD/DEAH box helicase ASQ49_02330 PF04408 Helicase associated domain (HA2) ASQ49_02330 PF08482 ATP-dependent helicase C-terminal ASQ49_02330 PF00271 Helicase conserved C-terminal domain ASQ49_02335 PF13344 Haloacid dehalogenase-like hydrolase ASQ49_02335 PF00293 NUDIX domain ASQ49_02340 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_02345 PF00581 Rhodanese-like domain ASQ49_02400 PF02350 UDP-N-acetylglucosamine 2-epimerase ASQ49_02420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ASQ49_02420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ASQ49_02420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ASQ49_02425 PF00005 ABC transporter ASQ49_02430 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASQ49_02435 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_02440 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_02445 PF00455 DeoR C terminal sensor domain ASQ49_02445 PF08220 DeoR-like helix-turn-helix domain ASQ49_02450 PF00294 pfkB family carbohydrate kinase ASQ49_02455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASQ49_02455 PF02378 Phosphotransferase system, EIIC ASQ49_02475 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_02475 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_02480 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ASQ49_02485 PF00132 Bacterial transferase hexapeptide (six repeats) ASQ49_02485 PF14602 Hexapeptide repeat of succinyl-transferase ASQ49_02485 PF12804 MobA-like NTP transferase domain ASQ49_02525 PF00534 Glycosyl transferases group 1 ASQ49_02525 PF13439 Glycosyltransferase Family 4 ASQ49_02545 PF00905 Penicillin binding protein transpeptidase domain ASQ49_02545 PF00912 Transglycosylase ASQ49_02620 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ASQ49_02620 PF01367 5'-3' exonuclease, C-terminal SAM fold ASQ49_02620 PF00476 DNA polymerase family A ASQ49_02620 PF09281 Taq polymerase, exonuclease ASQ49_02725 PF02796 Helix-turn-helix domain of resolvase ASQ49_02725 PF00239 Resolvase, N terminal domain ASQ49_02745 PF01381 Helix-turn-helix ASQ49_02810 PF01451 Low molecular weight phosphotyrosine protein phosphatase ASQ49_02835 PF00743 Flavin-binding monooxygenase-like ASQ49_02870 PF00571 CBS domain ASQ49_02870 PF03471 Transporter associated domain ASQ49_02870 PF01595 Cyclin M transmembrane N-terminal domain ASQ49_02875 PF00571 CBS domain ASQ49_02875 PF01595 Cyclin M transmembrane N-terminal domain ASQ49_02905 PF02779 Transketolase, pyrimidine binding domain ASQ49_02905 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ASQ49_02905 PF02780 Transketolase, C-terminal domain ASQ49_02920 PF00107 Zinc-binding dehydrogenase ASQ49_02920 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_02925 PF09335 SNARE associated Golgi protein ASQ49_02935 PF07687 Peptidase dimerisation domain ASQ49_02935 PF01546 Peptidase family M20/M25/M40 ASQ49_02945 PF00005 ABC transporter ASQ49_02960 PF00004 ATPase family associated with various cellular activities (AAA) ASQ49_02960 PF12002 MgsA AAA+ ATPase C terminal ASQ49_02960 PF16193 AAA C-terminal domain ASQ49_02965 PF01614 Bacterial transcriptional regulator ASQ49_02965 PF09339 IclR helix-turn-helix domain ASQ49_02970 PF17391 Urocanase N-terminal domain ASQ49_02970 PF01175 Urocanase Rossmann-like domain ASQ49_02970 PF17392 Urocanase C-terminal domain ASQ49_02975 PF01546 Peptidase family M20/M25/M40 ASQ49_02980 PF01979 Amidohydrolase family ASQ49_02985 PF01979 Amidohydrolase family ASQ49_02990 PF00221 Aromatic amino acid lyase ASQ49_03005 PF16193 AAA C-terminal domain ASQ49_03005 PF00004 ATPase family associated with various cellular activities (AAA) ASQ49_03005 PF12002 MgsA AAA+ ATPase C terminal ASQ49_03010 PF00356 Bacterial regulatory proteins, lacI family ASQ49_03020 PF00107 Zinc-binding dehydrogenase ASQ49_03020 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_03025 PF07729 FCD domain ASQ49_03025 PF00392 Bacterial regulatory proteins, gntR family ASQ49_03035 PF09370 Phosphoenolpyruvate hydrolase-like ASQ49_03045 PF01381 Helix-turn-helix ASQ49_03045 PF00717 Peptidase S24-like ASQ49_03050 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_03050 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_03080 PF01022 Bacterial regulatory protein, arsR family ASQ49_03085 PF06953 Arsenical resistance operon trans-acting repressor ArsD ASQ49_03090 PF02374 Anion-transporting ATPase ASQ49_03095 PF01695 IstB-like ATP binding protein ASQ49_03100 PF00665 Integrase core domain ASQ49_03110 PF00291 Pyridoxal-phosphate dependent enzyme ASQ49_03125 PF00872 Transposase, Mutator family ASQ49_03130 PF02837 Glycosyl hydrolases family 2, sugar binding domain ASQ49_03130 PF02929 Beta galactosidase small chain ASQ49_03130 PF16353 Domain of unknown function(DUF4981) ASQ49_03130 PF00703 Glycosyl hydrolases family 2 ASQ49_03130 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ASQ49_03140 PF01370 NAD dependent epimerase/dehydratase family ASQ49_03150 PF13936 Helix-turn-helix domain ASQ49_03150 PF00665 Integrase core domain ASQ49_03155 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_03155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASQ49_03160 PF13276 HTH-like domain ASQ49_03160 PF00665 Integrase core domain ASQ49_03160 PF13333 Integrase core domain ASQ49_03190 PF02614 Glucuronate isomerase ASQ49_03195 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ASQ49_03195 PF08666 SAF domain ASQ49_03200 PF08125 Mannitol dehydrogenase C-terminal domain ASQ49_03200 PF01232 Mannitol dehydrogenase Rossmann domain ASQ49_03205 PF00356 Bacterial regulatory proteins, lacI family ASQ49_03210 PF09339 IclR helix-turn-helix domain ASQ49_03210 PF01614 Bacterial transcriptional regulator ASQ49_03215 PF01081 KDPG and KHG aldolase ASQ49_03225 PF01238 Phosphomannose isomerase type I ASQ49_03235 PF00202 Aminotransferase class-III ASQ49_03255 PF12411 Choline sulfatase enzyme C terminal ASQ49_03255 PF00884 Sulfatase ASQ49_03260 PF00480 ROK family ASQ49_03265 PF00083 Sugar (and other) transporter ASQ49_03270 PF00884 Sulfatase ASQ49_03270 PF16347 Domain of unknown function (DUF4976) ASQ49_03275 PF02656 Domain of unknown function (DUF202) ASQ49_03285 PF04055 Radical SAM superfamily ASQ49_03285 PF13186 Iron-sulfur cluster-binding domain ASQ49_03290 PF00795 Carbon-nitrogen hydrolase ASQ49_03300 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_03300 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_03315 PF13091 PLD-like domain ASQ49_03315 PF13087 AAA domain ASQ49_03335 PF00561 alpha/beta hydrolase fold ASQ49_03345 PF00440 Bacterial regulatory proteins, tetR family ASQ49_03345 PF13305 Tetracyclin repressor-like, C-terminal domain ASQ49_03360 PF00117 Glutamine amidotransferase class-I ASQ49_03360 PF00958 GMP synthase C terminal domain ASQ49_03360 PF02540 NAD synthase ASQ49_03390 PF00872 Transposase, Mutator family ASQ49_03395 PF00570 HRDC domain ASQ49_03395 PF13361 UvrD-like helicase C-terminal domain ASQ49_03425 PF00145 C-5 cytosine-specific DNA methylase ASQ49_03430 PF00145 C-5 cytosine-specific DNA methylase ASQ49_03445 PF08676 MutL C terminal dimerisation domain ASQ49_03445 PF01119 DNA mismatch repair protein, C-terminal domain ASQ49_03495 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_03495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ASQ49_03500 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_03505 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_03510 PF13416 Bacterial extracellular solute-binding protein ASQ49_03515 PF03009 Glycerophosphoryl diester phosphodiesterase family ASQ49_03520 PF00356 Bacterial regulatory proteins, lacI family ASQ49_03525 PF16874 Glycosyl hydrolase family 36 C-terminal domain ASQ49_03525 PF16875 Glycosyl hydrolase family 36 N-terminal domain ASQ49_03530 PF02308 MgtC family ASQ49_03550 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ASQ49_03550 PF13378 Enolase C-terminal domain-like ASQ49_03560 PF00248 Aldo/keto reductase family ASQ49_03570 PF03786 D-mannonate dehydratase (UxuA) ASQ49_03575 PF01232 Mannitol dehydrogenase Rossmann domain ASQ49_03575 PF08125 Mannitol dehydrogenase C-terminal domain ASQ49_03580 PF02614 Glucuronate isomerase ASQ49_03585 PF00356 Bacterial regulatory proteins, lacI family ASQ49_03595 PF00171 Aldehyde dehydrogenase family ASQ49_03600 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_03600 PF00107 Zinc-binding dehydrogenase ASQ49_03605 PF03577 Peptidase family C69 ASQ49_03625 PF00356 Bacterial regulatory proteins, lacI family ASQ49_03635 PF00005 ABC transporter ASQ49_03640 PF02653 Branched-chain amino acid transport system / permease component ASQ49_03645 PF02653 Branched-chain amino acid transport system / permease component ASQ49_03660 PF08450 SMP-30/Gluconolactonase/LRE-like region ASQ49_03665 PF02581 Thiamine monophosphate synthase ASQ49_03670 PF02581 Thiamine monophosphate synthase ASQ49_03670 PF08543 Phosphomethylpyrimidine kinase ASQ49_03670 PF03070 TENA/THI-4/PQQC family ASQ49_03680 PF00994 Probable molybdopterin binding domain ASQ49_03680 PF01967 MoaC family ASQ49_03685 PF01967 MoaC family ASQ49_03690 PF00994 Probable molybdopterin binding domain ASQ49_03690 PF03453 MoeA N-terminal region (domain I and II) ASQ49_03690 PF03454 MoeA C-terminal region (domain IV) ASQ49_03695 PF02391 MoaE protein ASQ49_03705 PF06463 Molybdenum Cofactor Synthesis C ASQ49_03705 PF04055 Radical SAM superfamily ASQ49_03715 PF02665 Nitrate reductase gamma subunit ASQ49_03715 PF00384 Molybdopterin oxidoreductase ASQ49_03715 PF02613 Nitrate reductase delta subunit ASQ49_03720 PF02665 Nitrate reductase gamma subunit ASQ49_03720 PF00384 Molybdopterin oxidoreductase ASQ49_03720 PF02613 Nitrate reductase delta subunit ASQ49_03725 PF13247 4Fe-4S dicluster domain ASQ49_03725 PF14711 Respiratory nitrate reductase beta C-terminal ASQ49_03735 PF07690 Major Facilitator Superfamily ASQ49_03740 PF00067 Cytochrome P450 ASQ49_03745 PF01613 Flavin reductase like domain ASQ49_03750 PF00970 Oxidoreductase FAD-binding domain ASQ49_03750 PF00175 Oxidoreductase NAD-binding domain ASQ49_03750 PF00111 2Fe-2S iron-sulfur cluster binding domain ASQ49_03755 PF03063 Prismane/CO dehydrogenase family ASQ49_03760 PF12804 MobA-like NTP transferase domain ASQ49_03765 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ASQ49_03780 PF03459 TOBE domain ASQ49_03780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASQ49_03790 PF03459 TOBE domain ASQ49_03790 PF00005 ABC transporter ASQ49_03795 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_03805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_03805 PF00005 ABC transporter ASQ49_03810 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASQ49_03815 PF13409 Glutathione S-transferase, N-terminal domain ASQ49_03830 PF00583 Acetyltransferase (GNAT) family ASQ49_03865 PF00210 Ferritin-like domain ASQ49_03870 PF13545 Crp-like helix-turn-helix domain ASQ49_03870 PF00027 Cyclic nucleotide-binding domain ASQ49_03880 PF00403 Heavy-metal-associated domain ASQ49_03890 PF04343 Protein of unknown function, DUF488 ASQ49_03920 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_03920 PF00005 ABC transporter ASQ49_03925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASQ49_03930 PF00365 Phosphofructokinase ASQ49_03950 PF00171 Aldehyde dehydrogenase family ASQ49_03955 PF12704 MacB-like periplasmic core domain ASQ49_03955 PF02687 FtsX-like permease family ASQ49_03955 PF00005 ABC transporter ASQ49_03965 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASQ49_03965 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASQ49_03965 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASQ49_03965 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASQ49_03970 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ASQ49_03975 PF00682 HMGL-like ASQ49_03975 PF00364 Biotin-requiring enzyme ASQ49_03975 PF02436 Conserved carboxylase domain ASQ49_03985 PF01039 Carboxyl transferase domain ASQ49_03990 PF00549 CoA-ligase ASQ49_03990 PF08442 ATP-grasp domain ASQ49_03995 PF00708 Acylphosphatase ASQ49_04015 PF03949 Malic enzyme, NAD binding domain ASQ49_04015 PF00390 Malic enzyme, N-terminal domain ASQ49_04030 PF00950 ABC 3 transport family ASQ49_04030 PF02742 Iron dependent repressor, metal binding and dimerisation domain ASQ49_04035 PF01566 Natural resistance-associated macrophage protein ASQ49_04040 PF06965 Na+/H+ antiporter 1 ASQ49_04045 PF07690 Major Facilitator Superfamily ASQ49_04055 PF07690 Major Facilitator Superfamily ASQ49_04065 PF00905 Penicillin binding protein transpeptidase domain ASQ49_04065 PF00912 Transglycosylase ASQ49_04070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASQ49_04070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASQ49_04080 PF00534 Glycosyl transferases group 1 ASQ49_04080 PF13439 Glycosyltransferase Family 4 ASQ49_04100 PF03176 MMPL family ASQ49_04105 PF00440 Bacterial regulatory proteins, tetR family ASQ49_04120 PF00581 Rhodanese-like domain ASQ49_04120 PF00899 ThiF family ASQ49_04125 PF05690 Thiazole biosynthesis protein ThiG ASQ49_04135 PF00364 Biotin-requiring enzyme ASQ49_04135 PF00561 alpha/beta hydrolase fold ASQ49_04140 PF03330 Lytic transglycolase ASQ49_04175 PF00248 Aldo/keto reductase family ASQ49_04185 PF01546 Peptidase family M20/M25/M40 ASQ49_04185 PF07687 Peptidase dimerisation domain ASQ49_04200 PF01925 Sulfite exporter TauE/SafE ASQ49_04205 PF00009 Elongation factor Tu GTP binding domain ASQ49_04210 PF01507 Phosphoadenosine phosphosulfate reductase family ASQ49_04215 PF01507 Phosphoadenosine phosphosulfate reductase family ASQ49_04225 PF01370 NAD dependent epimerase/dehydratase family ASQ49_04230 PF00578 AhpC/TSA family ASQ49_04245 PF07731 Multicopper oxidase ASQ49_04245 PF00394 Multicopper oxidase ASQ49_04245 PF07732 Multicopper oxidase ASQ49_04255 PF00072 Response regulator receiver domain ASQ49_04255 PF00486 Transcriptional regulatory protein, C terminal ASQ49_04260 PF00672 HAMP domain ASQ49_04260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_04260 PF00512 His Kinase A (phospho-acceptor) domain ASQ49_04270 PF07730 Histidine kinase ASQ49_04275 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ASQ49_04280 PF00672 HAMP domain ASQ49_04280 PF00512 His Kinase A (phospho-acceptor) domain ASQ49_04280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_04290 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase ASQ49_04320 PF00005 ABC transporter ASQ49_04320 PF00664 ABC transporter transmembrane region ASQ49_04325 PF07690 Major Facilitator Superfamily ASQ49_04330 PF01139 tRNA-splicing ligase RtcB ASQ49_04335 PF05973 Phage derived protein Gp49-like (DUF891) ASQ49_04340 PF01381 Helix-turn-helix ASQ49_04350 PF00072 Response regulator receiver domain ASQ49_04350 PF00196 Bacterial regulatory proteins, luxR family ASQ49_04355 PF00005 ABC transporter ASQ49_04380 PF01268 Formate--tetrahydrofolate ligase ASQ49_04410 PF08546 Ketopantoate reductase PanE/ApbA C terminal ASQ49_04410 PF02558 Ketopantoate reductase PanE/ApbA ASQ49_04420 PF00171 Aldehyde dehydrogenase family ASQ49_04460 PF00437 Type II/IV secretion system protein ASQ49_04490 PF01380 SIS domain ASQ49_04510 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ASQ49_04520 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_04535 PF00155 Aminotransferase class I and II ASQ49_04540 PF00005 ABC transporter ASQ49_04545 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_04555 PF03099 Biotin/lipoate A/B protein ligase family ASQ49_04555 PF10437 Bacterial lipoate protein ligase C-terminus ASQ49_04565 PF00005 ABC transporter ASQ49_04585 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ASQ49_04585 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ASQ49_04590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_04590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_04600 PF03611 PTS system sugar-specific permease component ASQ49_04605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASQ49_04610 PF00107 Zinc-binding dehydrogenase ASQ49_04610 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_04620 PF00596 Class II Aldolase and Adducin N-terminal domain ASQ49_04630 PF01522 Polysaccharide deacetylase ASQ49_04650 PF01032 FecCD transport family ASQ49_04655 PF00005 ABC transporter ASQ49_04670 PF05973 Phage derived protein Gp49-like (DUF891) ASQ49_04690 PF00872 Transposase, Mutator family ASQ49_04730 PF00092 von Willebrand factor type A domain ASQ49_04750 PF17863 AAA lid domain ASQ49_04750 PF07726 ATPase family associated with various cellular activities (AAA) ASQ49_04760 PF00005 ABC transporter ASQ49_04820 PF04055 Radical SAM superfamily ASQ49_04825 PF03477 ATP cone domain ASQ49_04825 PF13597 Anaerobic ribonucleoside-triphosphate reductase ASQ49_04845 PF00289 Biotin carboxylase, N-terminal domain ASQ49_04845 PF02785 Biotin carboxylase C-terminal domain ASQ49_04845 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASQ49_04845 PF00682 HMGL-like ASQ49_04845 PF02436 Conserved carboxylase domain ASQ49_04845 PF00364 Biotin-requiring enzyme ASQ49_04850 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASQ49_04850 PF00056 lactate/malate dehydrogenase, NAD binding domain ASQ49_04855 PF03949 Malic enzyme, NAD binding domain ASQ49_04855 PF00390 Malic enzyme, N-terminal domain ASQ49_04860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASQ49_04860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASQ49_04860 PF00205 Thiamine pyrophosphate enzyme, central domain ASQ49_04865 PF02837 Glycosyl hydrolases family 2, sugar binding domain ASQ49_04865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ASQ49_04865 PF16353 Domain of unknown function(DUF4981) ASQ49_04865 PF02929 Beta galactosidase small chain ASQ49_04870 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASQ49_04870 PF00056 lactate/malate dehydrogenase, NAD binding domain ASQ49_04875 PF13350 Tyrosine phosphatase family ASQ49_04885 PF00005 ABC transporter ASQ49_04915 PF03600 Citrate transporter ASQ49_04930 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system ASQ49_04935 PF01850 PIN domain ASQ49_04940 PF13744 Helix-turn-helix domain ASQ49_04970 PF00005 ABC transporter ASQ49_04970 PF13732 Domain of unknown function (DUF4162) ASQ49_04975 PF01061 ABC-2 type transporter ASQ49_04980 PF05025 RbsD / FucU transport protein family ASQ49_04985 PF00294 pfkB family carbohydrate kinase ASQ49_04990 PF13407 Periplasmic binding protein domain ASQ49_04995 PF02653 Branched-chain amino acid transport system / permease component ASQ49_05000 PF00005 ABC transporter ASQ49_05005 PF00356 Bacterial regulatory proteins, lacI family ASQ49_05010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_05015 PF12089 Transmembrane domain of unknown function (DUF3566) ASQ49_05020 PF03989 DNA gyrase C-terminal domain, beta-propeller ASQ49_05020 PF00521 DNA gyrase/topoisomerase IV, subunit A ASQ49_05025 PF01751 Toprim domain ASQ49_05025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_05025 PF00986 DNA gyrase B subunit, carboxyl terminus ASQ49_05025 PF00204 DNA gyrase B ASQ49_05035 PF05258 Dna[CI] antecedent, DciA ASQ49_05040 PF02463 RecF/RecN/SMC N terminal domain ASQ49_05050 PF02768 DNA polymerase III beta subunit, C-terminal domain ASQ49_05050 PF02767 DNA polymerase III beta subunit, central domain ASQ49_05050 PF00712 DNA polymerase III beta subunit, N-terminal domain ASQ49_05055 PF12704 MacB-like periplasmic core domain ASQ49_05055 PF02687 FtsX-like permease family ASQ49_05055 PF00005 ABC transporter ASQ49_05060 PF00005 ABC transporter ASQ49_05060 PF12704 MacB-like periplasmic core domain ASQ49_05060 PF02687 FtsX-like permease family ASQ49_05065 PF00872 Transposase, Mutator family ASQ49_05070 PF00893 Small Multidrug Resistance protein ASQ49_05080 PF02096 60Kd inner membrane protein ASQ49_05090 PF00825 Ribonuclease P ASQ49_05095 PF00308 Bacterial dnaA protein ASQ49_05095 PF08299 Bacterial dnaA protein helix-turn-helix ASQ49_05100 PF00872 Transposase, Mutator family ASQ49_05105 PF02527 rRNA small subunit methyltransferase G ASQ49_05110 PF00872 Transposase, Mutator family ASQ49_05120 PF13614 AAA domain ASQ49_05125 PF17762 HTH domain found in ParB protein ASQ49_05125 PF02195 ParB-like nuclease domain ASQ49_05130 PF04679 ATP dependent DNA ligase C terminal region ASQ49_05130 PF13298 DNA polymerase Ligase (LigD) ASQ49_05130 PF01068 ATP dependent DNA ligase domain ASQ49_05135 PF12823 Domain of unknown function (DUF3817) ASQ49_05145 PF01820 D-ala D-ala ligase N-terminus ASQ49_05145 PF07478 D-ala D-ala ligase C-terminus ASQ49_05150 PF00155 Aminotransferase class I and II ASQ49_05165 PF00171 Aldehyde dehydrogenase family ASQ49_05170 PF01261 Xylose isomerase-like TIM barrel ASQ49_05175 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_05175 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_05180 PF01261 Xylose isomerase-like TIM barrel ASQ49_05185 PF00356 Bacterial regulatory proteins, lacI family ASQ49_05190 PF00083 Sugar (and other) transporter ASQ49_05195 PF00356 Bacterial regulatory proteins, lacI family ASQ49_05200 PF00083 Sugar (and other) transporter ASQ49_05205 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_05205 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_05215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_05215 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_05220 PF01261 Xylose isomerase-like TIM barrel ASQ49_05225 PF03601 Conserved hypothetical protein 698 ASQ49_05230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASQ49_05230 PF03466 LysR substrate binding domain ASQ49_05235 PF00356 Bacterial regulatory proteins, lacI family ASQ49_05245 PF01261 Xylose isomerase-like TIM barrel ASQ49_05250 PF00107 Zinc-binding dehydrogenase ASQ49_05250 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_05255 PF00923 Transaldolase/Fructose-6-phosphate aldolase ASQ49_05270 PF13086 AAA domain ASQ49_05270 PF13195 Protein of unknown function (DUF4011) ASQ49_05270 PF13086 AAA domain ASQ49_05270 PF13087 AAA domain ASQ49_05270 PF13195 Protein of unknown function (DUF4011) ASQ49_05270 PF13087 AAA domain ASQ49_05285 PF00085 Thioredoxin ASQ49_05290 PF00849 RNA pseudouridylate synthase ASQ49_05300 PF01638 HxlR-like helix-turn-helix ASQ49_05305 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_05310 PF00356 Bacterial regulatory proteins, lacI family ASQ49_05315 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ASQ49_05320 PF13416 Bacterial extracellular solute-binding protein ASQ49_05325 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_05330 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_05345 PF17820 PDZ domain ASQ49_05345 PF13180 PDZ domain ASQ49_05355 PF04198 Putative sugar-binding domain ASQ49_05360 PF00230 Major intrinsic protein ASQ49_05365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_05365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_05380 PF03793 PASTA domain ASQ49_05380 PF00069 Protein kinase domain ASQ49_05395 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_05395 PF00107 Zinc-binding dehydrogenase ASQ49_05400 PF01758 Sodium Bile acid symporter family ASQ49_05405 PF00171 Aldehyde dehydrogenase family ASQ49_05410 PF13735 tRNA nucleotidyltransferase domain 2 putative ASQ49_05410 PF01743 Poly A polymerase head domain ASQ49_05410 PF12627 Probable RNA and SrmB- binding site of polymerase A ASQ49_05420 PF02595 Glycerate kinase family ASQ49_05430 PF00924 Mechanosensitive ion channel ASQ49_05445 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASQ49_05445 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASQ49_05450 PF00455 DeoR C terminal sensor domain ASQ49_05450 PF08220 DeoR-like helix-turn-helix domain ASQ49_05460 PF07690 Major Facilitator Superfamily ASQ49_05475 PF00005 ABC transporter ASQ49_05485 PF03051 Peptidase C1-like family ASQ49_05495 PF05076 Suppressor of fused protein (SUFU) ASQ49_05500 PF01964 Radical SAM ThiC family ASQ49_05500 PF13667 ThiC-associated domain ASQ49_05505 PF10415 Fumarase C C-terminus ASQ49_05505 PF00206 Lyase ASQ49_05520 PF05167 Uncharacterised ACR (DUF711) ASQ49_05530 PF00654 Voltage gated chloride channel ASQ49_05555 PF00728 Glycosyl hydrolase family 20, catalytic domain ASQ49_05555 PF02838 Glycosyl hydrolase family 20, domain 2 ASQ49_05570 PF00962 Adenosine/AMP deaminase ASQ49_05575 PF00285 Citrate synthase, C-terminal domain ASQ49_05580 PF03330 Lytic transglycolase ASQ49_05585 PF03734 L,D-transpeptidase catalytic domain ASQ49_05585 PF17964 Bacterial Ig domain ASQ49_05625 PF12146 Serine aminopeptidase, S33 ASQ49_05630 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ASQ49_05630 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ASQ49_05635 PF00365 Phosphofructokinase ASQ49_05645 PF00069 Protein kinase domain ASQ49_05650 PF01061 ABC-2 type transporter ASQ49_05650 PF00005 ABC transporter ASQ49_05650 PF00498 FHA domain ASQ49_05660 PF00355 Rieske [2Fe-2S] domain ASQ49_05665 PF02540 NAD synthase ASQ49_05665 PF00795 Carbon-nitrogen hydrolase ASQ49_05675 PF01402 Ribbon-helix-helix protein, copG family ASQ49_05680 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ASQ49_05685 PF00294 pfkB family carbohydrate kinase ASQ49_05690 PF00251 Glycosyl hydrolases family 32 N-terminal domain ASQ49_05690 PF08244 Glycosyl hydrolases family 32 C terminal ASQ49_05705 PF01638 HxlR-like helix-turn-helix ASQ49_05710 PF02585 GlcNAc-PI de-N-acetylase ASQ49_05730 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_05735 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_05745 PF04073 Aminoacyl-tRNA editing domain ASQ49_05755 PF00294 pfkB family carbohydrate kinase ASQ49_05770 PF01554 MatE ASQ49_05785 PF01695 IstB-like ATP binding protein ASQ49_05815 PF13175 AAA ATPase domain ASQ49_05825 PF04264 YceI-like domain ASQ49_05835 PF00324 Amino acid permease ASQ49_05845 PF01047 MarR family ASQ49_05850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASQ49_05850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASQ49_05855 PF01266 FAD dependent oxidoreductase ASQ49_05855 PF04324 BFD-like [2Fe-2S] binding domain ASQ49_05860 PF00890 FAD binding domain ASQ49_05865 PF13183 4Fe-4S dicluster domain ASQ49_05865 PF02754 Cysteine-rich domain ASQ49_05870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_05870 PF07730 Histidine kinase ASQ49_05880 PF12704 MacB-like periplasmic core domain ASQ49_05880 PF02687 FtsX-like permease family ASQ49_05880 PF00005 ABC transporter ASQ49_05905 PF00005 ABC transporter ASQ49_05910 PF09594 Glycosyltransferase family 87 ASQ49_05915 PF00196 Bacterial regulatory proteins, luxR family ASQ49_05915 PF00072 Response regulator receiver domain ASQ49_05925 PF02913 FAD linked oxidases, C-terminal domain ASQ49_05925 PF01565 FAD binding domain ASQ49_05930 PF00155 Aminotransferase class I and II ASQ49_05935 PF14759 Reductase C-terminal ASQ49_05935 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_05970 PF00106 short chain dehydrogenase ASQ49_05975 PF01261 Xylose isomerase-like TIM barrel ASQ49_05985 PF00501 AMP-binding enzyme ASQ49_05995 PF03239 Iron permease FTR1 family ASQ49_06000 PF13473 Cupredoxin-like domain ASQ49_06000 PF09375 Imelysin ASQ49_06005 PF10518 TAT (twin-arginine translocation) pathway signal sequence ASQ49_06005 PF04261 Dyp-type peroxidase family ASQ49_06010 PF01250 Ribosomal protein S6 ASQ49_06015 PF00436 Single-strand binding protein family ASQ49_06020 PF01084 Ribosomal protein S18 ASQ49_06025 PF03948 Ribosomal protein L9, C-terminal domain ASQ49_06025 PF01281 Ribosomal protein L9, N-terminal domain ASQ49_06035 PF00398 Ribosomal RNA adenine dimethylase ASQ49_06040 PF02673 Bacitracin resistance protein BacA ASQ49_06050 PF00689 Cation transporting ATPase, C-terminus ASQ49_06050 PF00690 Cation transporter/ATPase, N-terminus ASQ49_06055 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ASQ49_06070 PF16916 Dimerisation domain of Zinc Transporter ASQ49_06070 PF01545 Cation efflux family ASQ49_06075 PF02674 Colicin V production protein ASQ49_06080 PF00293 NUDIX domain ASQ49_06090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_06090 PF00512 His Kinase A (phospho-acceptor) domain ASQ49_06090 PF00672 HAMP domain ASQ49_06095 PF00486 Transcriptional regulatory protein, C terminal ASQ49_06095 PF00072 Response regulator receiver domain ASQ49_06105 PF00356 Bacterial regulatory proteins, lacI family ASQ49_06115 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06120 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06130 PF07944 Beta-L-arabinofuranosidase, GH127 ASQ49_06140 PF02423 Ornithine cyclodeaminase/mu-crystallin family ASQ49_06155 PF00664 ABC transporter transmembrane region ASQ49_06155 PF00005 ABC transporter ASQ49_06160 PF00664 ABC transporter transmembrane region ASQ49_06160 PF00005 ABC transporter ASQ49_06165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASQ49_06175 PF00128 Alpha amylase, catalytic domain ASQ49_06180 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06200 PF00135 Carboxylesterase family ASQ49_06215 PF02308 MgtC family ASQ49_06220 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06225 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06230 PF13416 Bacterial extracellular solute-binding protein ASQ49_06240 PF00128 Alpha amylase, catalytic domain ASQ49_06245 PF14310 Fibronectin type III-like domain ASQ49_06245 PF00933 Glycosyl hydrolase family 3 N terminal domain ASQ49_06245 PF01915 Glycosyl hydrolase family 3 C-terminal domain ASQ49_06290 PF02839 Carbohydrate binding domain ASQ49_06290 PF00150 Cellulase (glycosyl hydrolase family 5) ASQ49_06300 PF01547 Bacterial extracellular solute-binding protein ASQ49_06305 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06310 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06325 PF00115 Cytochrome C and Quinol oxidase polypeptide I ASQ49_06345 PF00083 Sugar (and other) transporter ASQ49_06355 PF00107 Zinc-binding dehydrogenase ASQ49_06355 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_06360 PF01791 DeoC/LacD family aldolase ASQ49_06365 PF00248 Aldo/keto reductase family ASQ49_06370 PF00596 Class II Aldolase and Adducin N-terminal domain ASQ49_06375 PF01842 ACT domain ASQ49_06375 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASQ49_06375 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASQ49_06380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_06380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_06385 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_06385 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_06390 PF04198 Putative sugar-binding domain ASQ49_06395 PF00251 Glycosyl hydrolases family 32 N-terminal domain ASQ49_06395 PF08244 Glycosyl hydrolases family 32 C terminal ASQ49_06405 PF00072 Response regulator receiver domain ASQ49_06405 PF00486 Transcriptional regulatory protein, C terminal ASQ49_06410 PF00672 HAMP domain ASQ49_06410 PF00512 His Kinase A (phospho-acceptor) domain ASQ49_06410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_06425 PF00970 Oxidoreductase FAD-binding domain ASQ49_06425 PF00111 2Fe-2S iron-sulfur cluster binding domain ASQ49_06425 PF00175 Oxidoreductase NAD-binding domain ASQ49_06440 PF04471 Restriction endonuclease ASQ49_06440 PF14338 Mrr N-terminal domain ASQ49_06445 PF04945 YHS domain ASQ49_06470 PF01022 Bacterial regulatory protein, arsR family ASQ49_06475 PF03636 Glycosyl hydrolase family 65, N-terminal domain ASQ49_06475 PF03633 Glycosyl hydrolase family 65, C-terminal domain ASQ49_06475 PF03632 Glycosyl hydrolase family 65 central catalytic domain ASQ49_06485 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06490 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06495 PF00005 ABC transporter ASQ49_06510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASQ49_06510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASQ49_06515 PF01425 Amidase ASQ49_06550 PF00171 Aldehyde dehydrogenase family ASQ49_06560 PF00392 Bacterial regulatory proteins, gntR family ASQ49_06560 PF07729 FCD domain ASQ49_06565 PF01321 Creatinase/Prolidase N-terminal domain ASQ49_06565 PF00557 Metallopeptidase family M24 ASQ49_06570 PF00392 Bacterial regulatory proteins, gntR family ASQ49_06570 PF00155 Aminotransferase class I and II ASQ49_06575 PF07687 Peptidase dimerisation domain ASQ49_06575 PF01546 Peptidase family M20/M25/M40 ASQ49_06580 PF00083 Sugar (and other) transporter ASQ49_06580 PF08946 Osmosensory transporter coiled coil ASQ49_06625 PF00676 Dehydrogenase E1 component ASQ49_06630 PF02780 Transketolase, C-terminal domain ASQ49_06630 PF02779 Transketolase, pyrimidine binding domain ASQ49_06635 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASQ49_06635 PF00364 Biotin-requiring enzyme ASQ49_06635 PF02817 e3 binding domain ASQ49_06645 PF00842 Alanine racemase, C-terminal domain ASQ49_06645 PF01168 Alanine racemase, N-terminal domain ASQ49_06655 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ASQ49_06665 PF01842 ACT domain ASQ49_06665 PF00800 Prephenate dehydratase ASQ49_06675 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASQ49_06675 PF02403 Seryl-tRNA synthetase N-terminal domain ASQ49_06685 PF00232 Glycosyl hydrolase family 1 ASQ49_06695 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06700 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06710 PF00356 Bacterial regulatory proteins, lacI family ASQ49_06735 PF00764 Arginosuccinate synthase ASQ49_06740 PF00550 Phosphopantetheine attachment site ASQ49_06740 PF08659 KR domain ASQ49_06740 PF02801 Beta-ketoacyl synthase, C-terminal domain ASQ49_06740 PF00109 Beta-ketoacyl synthase, N-terminal domain ASQ49_06740 PF16197 Ketoacyl-synthetase C-terminal extension ASQ49_06740 PF14765 Polyketide synthase dehydratase ASQ49_06740 PF00107 Zinc-binding dehydrogenase ASQ49_06740 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_06740 PF00698 Acyl transferase domain ASQ49_06765 PF10509 Galactokinase galactose-binding signature ASQ49_06765 PF08544 GHMP kinases C terminal ASQ49_06765 PF00288 GHMP kinases N terminal domain ASQ49_06770 PF00356 Bacterial regulatory proteins, lacI family ASQ49_06775 PF03816 Cell envelope-related transcriptional attenuator domain ASQ49_06800 PF03009 Glycerophosphoryl diester phosphodiesterase family ASQ49_06805 PF00326 Prolyl oligopeptidase family ASQ49_06805 PF07676 WD40-like Beta Propeller Repeat ASQ49_06810 PF00107 Zinc-binding dehydrogenase ASQ49_06810 PF16884 N-terminal domain of oxidoreductase ASQ49_06815 PF00128 Alpha amylase, catalytic domain ASQ49_06815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ASQ49_06820 PF07690 Major Facilitator Superfamily ASQ49_06845 PF14437 MafB19-like deaminase ASQ49_06865 PF14765 Polyketide synthase dehydratase ASQ49_06865 PF00550 Phosphopantetheine attachment site ASQ49_06865 PF02801 Beta-ketoacyl synthase, C-terminal domain ASQ49_06865 PF00698 Acyl transferase domain ASQ49_06865 PF08659 KR domain ASQ49_06865 PF16197 Ketoacyl-synthetase C-terminal extension ASQ49_06865 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_06865 PF00109 Beta-ketoacyl synthase, N-terminal domain ASQ49_06875 PF00892 EamA-like transporter family ASQ49_06890 PF00144 Beta-lactamase ASQ49_06900 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_06910 PF00571 CBS domain ASQ49_06910 PF00005 ABC transporter ASQ49_06915 PF03471 Transporter associated domain ASQ49_06915 PF02080 TrkA-C domain ASQ49_06915 PF00999 Sodium/hydrogen exchanger family ASQ49_06930 PF05872 Bacterial protein of unknown function (DUF853) ASQ49_06935 PF00155 Aminotransferase class I and II ASQ49_06950 PF03591 AzlC protein ASQ49_06960 PF03330 Lytic transglycolase ASQ49_06980 PF14552 Tautomerase enzyme ASQ49_06985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_06985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_06990 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ASQ49_06990 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_07005 PF00107 Zinc-binding dehydrogenase ASQ49_07005 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_07010 PF01791 DeoC/LacD family aldolase ASQ49_07015 PF13936 Helix-turn-helix domain ASQ49_07015 PF04198 Putative sugar-binding domain ASQ49_07020 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_07020 PF00107 Zinc-binding dehydrogenase ASQ49_07025 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_07025 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_07030 PF00356 Bacterial regulatory proteins, lacI family ASQ49_07040 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_07045 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_07050 PF01547 Bacterial extracellular solute-binding protein ASQ49_07060 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ASQ49_07060 PF00294 pfkB family carbohydrate kinase ASQ49_07065 PF01380 SIS domain ASQ49_07065 PF00571 CBS domain ASQ49_07075 PF00106 short chain dehydrogenase ASQ49_07080 PF00872 Transposase, Mutator family ASQ49_07085 PF00202 Aminotransferase class-III ASQ49_07090 PF00106 short chain dehydrogenase ASQ49_07095 PF00392 Bacterial regulatory proteins, gntR family ASQ49_07095 PF00155 Aminotransferase class I and II ASQ49_07105 PF03649 Uncharacterised protein family (UPF0014) ASQ49_07110 PF01569 PAP2 superfamily ASQ49_07115 PF02673 Bacitracin resistance protein BacA ASQ49_07120 PF00072 Response regulator receiver domain ASQ49_07120 PF00486 Transcriptional regulatory protein, C terminal ASQ49_07125 PF00512 His Kinase A (phospho-acceptor) domain ASQ49_07125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_07125 PF11808 Phosphate regulon sensor protein PhoR ASQ49_07125 PF00989 PAS fold ASQ49_07130 PF13439 Glycosyltransferase Family 4 ASQ49_07130 PF00534 Glycosyl transferases group 1 ASQ49_07140 PF09335 SNARE associated Golgi protein ASQ49_07150 PF13932 GidA associated domain ASQ49_07150 PF01134 Glucose inhibited division protein A ASQ49_07155 PF00083 Sugar (and other) transporter ASQ49_07155 PF08946 Osmosensory transporter coiled coil ASQ49_07165 PF00872 Transposase, Mutator family ASQ49_07180 PF00486 Transcriptional regulatory protein, C terminal ASQ49_07180 PF00072 Response regulator receiver domain ASQ49_07185 PF13493 Domain of unknown function (DUF4118) ASQ49_07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_07185 PF02702 Osmosensitive K+ channel His kinase sensor domain ASQ49_07190 PF02705 K+ potassium transporter ASQ49_07210 PF00248 Aldo/keto reductase family ASQ49_07215 PF06150 ChaB ASQ49_07235 PF00141 Peroxidase ASQ49_07255 PF03631 Virulence factor BrkB ASQ49_07270 PF00210 Ferritin-like domain ASQ49_07275 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_07275 PF14759 Reductase C-terminal ASQ49_07285 PF00067 Cytochrome P450 ASQ49_07290 PF04679 ATP dependent DNA ligase C terminal region ASQ49_07290 PF01068 ATP dependent DNA ligase domain ASQ49_07290 PF13298 DNA polymerase Ligase (LigD) ASQ49_07315 PF00196 Bacterial regulatory proteins, luxR family ASQ49_07315 PF00072 Response regulator receiver domain ASQ49_07345 PF04226 Transglycosylase associated protein ASQ49_07360 PF00561 alpha/beta hydrolase fold ASQ49_07370 PF13291 ACT domain ASQ49_07370 PF04607 Region found in RelA / SpoT proteins ASQ49_07370 PF02824 TGS domain ASQ49_07375 PF01554 MatE ASQ49_07385 PF02146 Sir2 family ASQ49_07395 PF00140 Sigma-70 factor, region 1.2 ASQ49_07395 PF04539 Sigma-70 region 3 ASQ49_07395 PF04545 Sigma-70, region 4 ASQ49_07395 PF04542 Sigma-70 region 2 ASQ49_07405 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_07405 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_07410 PF07859 alpha/beta hydrolase fold ASQ49_07415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASQ49_07420 PF03883 Peroxide stress protein YaaA ASQ49_07435 PF00005 ABC transporter ASQ49_07435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_07440 PF00005 ABC transporter ASQ49_07440 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_07445 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_07445 PF12911 N-terminal TM domain of oligopeptide transport permease C ASQ49_07450 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_07480 PF01047 MarR family ASQ49_07485 PF02574 Homocysteine S-methyltransferase ASQ49_07510 PF00149 Calcineurin-like phosphoesterase ASQ49_07510 PF10518 TAT (twin-arginine translocation) pathway signal sequence ASQ49_07515 PF00905 Penicillin binding protein transpeptidase domain ASQ49_07515 PF00912 Transglycosylase ASQ49_07520 PF02467 Transcription factor WhiB ASQ49_07530 PF00027 Cyclic nucleotide-binding domain ASQ49_07530 PF13545 Crp-like helix-turn-helix domain ASQ49_07535 PF10576 Iron-sulfur binding domain of endonuclease III ASQ49_07535 PF00730 HhH-GPD superfamily base excision DNA repair protein ASQ49_07535 PF00633 Helix-hairpin-helix motif ASQ49_07540 PF08534 Redoxin ASQ49_07545 PF00293 NUDIX domain ASQ49_07565 PF00437 Type II/IV secretion system protein ASQ49_07615 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ASQ49_07630 PF00270 DEAD/DEAH box helicase ASQ49_07630 PF09369 Domain of unknown function (DUF1998) ASQ49_07630 PF00271 Helicase conserved C-terminal domain ASQ49_07635 PF17827 PrmC N-terminal domain ASQ49_07635 PF05175 Methyltransferase small domain ASQ49_07645 PF13368 Topoisomerase C-terminal repeat ASQ49_07645 PF01131 DNA topoisomerase ASQ49_07645 PF01751 Toprim domain ASQ49_07655 PF02223 Thymidylate kinase ASQ49_07660 PF12169 DNA polymerase III subunits gamma and tau domain III ASQ49_07670 PF04468 PSP1 C-terminal conserved region ASQ49_07675 PF00561 alpha/beta hydrolase fold ASQ49_07710 PF01593 Flavin containing amine oxidoreductase ASQ49_07715 PF03358 NADPH-dependent FMN reductase ASQ49_07740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASQ49_07745 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_07750 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_07750 PF12911 N-terminal TM domain of oligopeptide transport permease C ASQ49_07755 PF00005 ABC transporter ASQ49_07755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_07765 PF01037 Lrp/AsnC ligand binding domain ASQ49_07790 PF00543 Nitrogen regulatory protein P-II ASQ49_07795 PF00909 Ammonium Transporter Family ASQ49_07815 PF05448 Acetyl xylan esterase (AXE1) ASQ49_07825 PF00719 Inorganic pyrophosphatase ASQ49_07830 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ASQ49_07835 PF01171 PP-loop family ASQ49_07850 PF01227 GTP cyclohydrolase I ASQ49_07855 PF00809 Pterin binding enzyme ASQ49_07860 PF02152 Dihydroneopterin aldolase ASQ49_07865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ASQ49_07880 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ASQ49_07895 PF10431 C-terminal, D2-small domain, of ClpB protein ASQ49_07895 PF17871 AAA lid domain ASQ49_07895 PF07724 AAA domain (Cdc48 subfamily) ASQ49_07895 PF00004 ATPase family associated with various cellular activities (AAA) ASQ49_07895 PF02861 Clp amino terminal domain, pathogenicity island component ASQ49_07900 PF02558 Ketopantoate reductase PanE/ApbA ASQ49_07900 PF08546 Ketopantoate reductase PanE/ApbA C terminal ASQ49_07940 PF07690 Major Facilitator Superfamily ASQ49_07945 PF01370 NAD dependent epimerase/dehydratase family ASQ49_07945 PF08338 Domain of unknown function (DUF1731) ASQ49_07950 PF01694 Rhomboid family ASQ49_07955 PF00485 Phosphoribulokinase / Uridine kinase family ASQ49_07960 PF01547 Bacterial extracellular solute-binding protein ASQ49_07970 PF08402 TOBE domain ASQ49_07970 PF00005 ABC transporter ASQ49_07980 PF00633 Helix-hairpin-helix motif ASQ49_07980 PF00730 HhH-GPD superfamily base excision DNA repair protein ASQ49_07980 PF10576 Iron-sulfur binding domain of endonuclease III ASQ49_07985 PF00202 Aminotransferase class-III ASQ49_07990 PF00490 Delta-aminolevulinic acid dehydratase ASQ49_08000 PF03900 Porphobilinogen deaminase, C-terminal domain ASQ49_08000 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ASQ49_08005 PF01593 Flavin containing amine oxidoreductase ASQ49_08010 PF01208 Uroporphyrinogen decarboxylase (URO-D) ASQ49_08015 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ASQ49_08015 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ASQ49_08015 PF01488 Shikimate / quinate 5-dehydrogenase ASQ49_08035 PF10635 DisA bacterial checkpoint controller linker region ASQ49_08035 PF02457 DisA bacterial checkpoint controller nucleotide-binding ASQ49_08040 PF18073 Rubredoxin metal binding domain ASQ49_08040 PF06745 KaiC ASQ49_08055 PF01261 Xylose isomerase-like TIM barrel ASQ49_08060 PF01619 Proline dehydrogenase ASQ49_08075 PF03807 NADP oxidoreductase coenzyme F420-dependent ASQ49_08075 PF14748 Pyrroline-5-carboxylate reductase dimerisation ASQ49_08085 PF06971 Putative DNA-binding protein N-terminus ASQ49_08085 PF02629 CoA binding domain ASQ49_08090 PF10414 Sirohaem synthase dimerisation region ASQ49_08090 PF14824 Sirohaem biosynthesis protein central ASQ49_08090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_08095 PF00300 Histidine phosphatase superfamily (branch 1) ASQ49_08100 PF08534 Redoxin ASQ49_08105 PF02683 Cytochrome C biogenesis protein transmembrane region ASQ49_08115 PF01578 Cytochrome C assembly protein ASQ49_08135 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ASQ49_08135 PF01266 FAD dependent oxidoreductase ASQ49_08140 PF03176 MMPL family ASQ49_08145 PF00999 Sodium/hydrogen exchanger family ASQ49_08150 PF00585 C-terminal regulatory domain of Threonine dehydratase ASQ49_08150 PF00291 Pyridoxal-phosphate dependent enzyme ASQ49_08155 PF00920 Dehydratase family ASQ49_08165 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_08165 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASQ49_08170 PF04954 Siderophore-interacting protein ASQ49_08170 PF08021 Siderophore-interacting FAD-binding domain ASQ49_08175 PF00005 ABC transporter ASQ49_08180 PF01032 FecCD transport family ASQ49_08185 PF01032 FecCD transport family ASQ49_08190 PF01497 Periplasmic binding protein ASQ49_08195 PF01297 Zinc-uptake complex component A periplasmic ASQ49_08205 PF00005 ABC transporter ASQ49_08210 PF00950 ABC 3 transport family ASQ49_08220 PF02492 CobW/HypB/UreG, nucleotide-binding domain ASQ49_08220 PF07683 Cobalamin synthesis protein cobW C-terminal domain ASQ49_08230 PF00471 Ribosomal protein L33 ASQ49_08235 PF01197 Ribosomal protein L31 ASQ49_08245 PF01783 Ribosomal L32p protein family ASQ49_08250 PF00830 Ribosomal L28 family ASQ49_08255 PF00005 ABC transporter ASQ49_08260 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_08265 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_08270 PF12849 PBP superfamily domain ASQ49_08275 PF00300 Histidine phosphatase superfamily (branch 1) ASQ49_08275 PF00293 NUDIX domain ASQ49_08280 PF13089 Polyphosphate kinase N-terminal domain ASQ49_08280 PF17941 Polyphosphate kinase C-terminal domain 1 ASQ49_08280 PF13090 Polyphosphate kinase C-terminal domain 2 ASQ49_08280 PF02503 Polyphosphate kinase middle domain ASQ49_08285 PF00486 Transcriptional regulatory protein, C terminal ASQ49_08315 PF02580 D-Tyr-tRNA(Tyr) deacylase ASQ49_08320 PF08768 Domain of unknown function (DUF1794) ASQ49_08325 PF01571 Aminomethyltransferase folate-binding domain ASQ49_08330 PF02397 Bacterial sugar transferase ASQ49_08345 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ASQ49_08360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASQ49_08360 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_08365 PF02583 Metal-sensitive transcriptional repressor ASQ49_08380 PF00709 Adenylosuccinate synthetase ASQ49_08385 PF01850 PIN domain ASQ49_08390 PF07704 Rv0623-like transcription factor ASQ49_08395 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ASQ49_08395 PF02843 Phosphoribosylglycinamide synthetase, C domain ASQ49_08395 PF02844 Phosphoribosylglycinamide synthetase, N domain ASQ49_08400 PF10397 Adenylosuccinate lyase C-terminus ASQ49_08400 PF00206 Lyase ASQ49_08405 PF03466 LysR substrate binding domain ASQ49_08405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASQ49_08410 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_08410 PF13192 Thioredoxin domain ASQ49_08415 PF00578 AhpC/TSA family ASQ49_08415 PF10417 C-terminal domain of 1-Cys peroxiredoxin ASQ49_08420 PF01259 SAICAR synthetase ASQ49_08430 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ASQ49_08430 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ASQ49_08435 PF01433 Peptidase family M1 domain ASQ49_08435 PF11838 ERAP1-like C-terminal domain ASQ49_08440 PF00324 Amino acid permease ASQ49_08445 PF00710 Asparaginase, N-terminal ASQ49_08445 PF17763 Glutaminase/Asparaginase C-terminal domain ASQ49_08460 PF00586 AIR synthase related protein, N-terminal domain ASQ49_08460 PF02769 AIR synthase related protein, C-terminal domain ASQ49_08460 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ASQ49_08465 PF01145 SPFH domain / Band 7 family ASQ49_08485 PF07687 Peptidase dimerisation domain ASQ49_08485 PF01546 Peptidase family M20/M25/M40 ASQ49_08495 PF00156 Phosphoribosyl transferase domain ASQ49_08500 PF00586 AIR synthase related protein, N-terminal domain ASQ49_08500 PF02769 AIR synthase related protein, C-terminal domain ASQ49_08525 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_08530 PF02653 Branched-chain amino acid transport system / permease component ASQ49_08535 PF02653 Branched-chain amino acid transport system / permease component ASQ49_08535 PF11862 Domain of unknown function (DUF3382) ASQ49_08540 PF12399 Branched-chain amino acid ATP-binding cassette transporter ASQ49_08540 PF00005 ABC transporter ASQ49_08545 PF00005 ABC transporter ASQ49_08625 PF03033 Glycosyltransferase family 28 N-terminal domain ASQ49_08635 PF07859 alpha/beta hydrolase fold ASQ49_08645 PF17755 UvrA DNA-binding domain ASQ49_08645 PF00005 ABC transporter ASQ49_08645 PF17760 UvrA interaction domain ASQ49_08660 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ASQ49_08660 PF00391 PEP-utilising enzyme, mobile domain ASQ49_08685 PF01070 FMN-dependent dehydrogenase ASQ49_08690 PF08544 GHMP kinases C terminal ASQ49_08690 PF00288 GHMP kinases N terminal domain ASQ49_08700 PF08544 GHMP kinases C terminal ASQ49_08700 PF00288 GHMP kinases N terminal domain ASQ49_08700 PF10509 Galactokinase galactose-binding signature ASQ49_08705 PF00296 Luciferase-like monooxygenase ASQ49_08715 PF00296 Luciferase-like monooxygenase ASQ49_08720 PF13344 Haloacid dehalogenase-like hydrolase ASQ49_08735 PF16916 Dimerisation domain of Zinc Transporter ASQ49_08735 PF01545 Cation efflux family ASQ49_08740 PF00288 GHMP kinases N terminal domain ASQ49_08740 PF10509 Galactokinase galactose-binding signature ASQ49_08740 PF08544 GHMP kinases C terminal ASQ49_08755 PF00391 PEP-utilising enzyme, mobile domain ASQ49_08755 PF05524 PEP-utilising enzyme, N-terminal ASQ49_08755 PF00381 PTS HPr component phosphorylation site ASQ49_08755 PF03610 PTS system fructose IIA component ASQ49_08760 PF02734 DAK2 domain ASQ49_08765 PF02733 Dak1 domain ASQ49_08770 PF07690 Major Facilitator Superfamily ASQ49_08775 PF01040 UbiA prenyltransferase family ASQ49_08785 PF00005 ABC transporter ASQ49_08785 PF00664 ABC transporter transmembrane region ASQ49_08795 PF01209 ubiE/COQ5 methyltransferase family ASQ49_08800 PF00005 ABC transporter ASQ49_08820 PF00425 chorismate binding enzyme ASQ49_08825 PF01494 FAD binding domain ASQ49_08830 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 ASQ49_08835 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ASQ49_08840 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ASQ49_08845 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ASQ49_08855 PF10531 SLBB domain ASQ49_08855 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region ASQ49_08855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ASQ49_08860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ASQ49_08860 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ASQ49_08860 PF01568 Molydopterin dinucleotide binding domain ASQ49_08860 PF00384 Molybdopterin oxidoreductase ASQ49_08865 PF00146 NADH dehydrogenase ASQ49_08870 PF12838 4Fe-4S dicluster domain ASQ49_08875 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 ASQ49_08880 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ASQ49_08885 PF00361 Proton-conducting membrane transporter ASQ49_08885 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ASQ49_08890 PF00361 Proton-conducting membrane transporter ASQ49_08895 PF00361 Proton-conducting membrane transporter ASQ49_08900 PF00348 Polyprenyl synthetase ASQ49_08910 PF06751 Ethanolamine ammonia lyase large subunit (EutB) ASQ49_08915 PF05985 Ethanolamine ammonia-lyase light chain (EutC) ASQ49_08920 PF03328 HpcH/HpaI aldolase/citrate lyase family ASQ49_08925 PF13407 Periplasmic binding protein domain ASQ49_08930 PF00005 ABC transporter ASQ49_08935 PF02653 Branched-chain amino acid transport system / permease component ASQ49_08950 PF05649 Peptidase family M13 ASQ49_08950 PF01431 Peptidase family M13 ASQ49_08955 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASQ49_08960 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ASQ49_08960 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ASQ49_08960 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ASQ49_08965 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit ASQ49_08970 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit ASQ49_08970 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit ASQ49_08975 PF00037 4Fe-4S binding domain ASQ49_08995 PF04461 Protein of unknown function (DUF520) ASQ49_09015 PF00471 Ribosomal protein L33 ASQ49_09020 PF13452 N-terminal half of MaoC dehydratase ASQ49_09030 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ASQ49_09030 PF01565 FAD binding domain ASQ49_09035 PF12897 Alanine-glyoxylate amino-transferase ASQ49_09050 PF02357 Transcription termination factor nusG ASQ49_09055 PF03946 Ribosomal protein L11, N-terminal domain ASQ49_09055 PF00298 Ribosomal protein L11, RNA binding domain ASQ49_09060 PF00687 Ribosomal protein L1p/L10e family ASQ49_09070 PF00542 Ribosomal protein L7/L12 C-terminal domain ASQ49_09070 PF16320 Ribosomal protein L7/L12 dimerisation domain ASQ49_09075 PF04565 RNA polymerase Rpb2, domain 3 ASQ49_09075 PF04561 RNA polymerase Rpb2, domain 2 ASQ49_09075 PF00562 RNA polymerase Rpb2, domain 6 ASQ49_09075 PF04560 RNA polymerase Rpb2, domain 7 ASQ49_09075 PF04563 RNA polymerase beta subunit ASQ49_09075 PF10385 RNA polymerase beta subunit external 1 domain ASQ49_09080 PF04983 RNA polymerase Rpb1, domain 3 ASQ49_09080 PF05000 RNA polymerase Rpb1, domain 4 ASQ49_09080 PF04997 RNA polymerase Rpb1, domain 1 ASQ49_09080 PF00623 RNA polymerase Rpb1, domain 2 ASQ49_09080 PF04998 RNA polymerase Rpb1, domain 5 ASQ49_09100 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ASQ49_09105 PF00164 Ribosomal protein S12/S23 ASQ49_09110 PF00177 Ribosomal protein S7p/S5e ASQ49_09115 PF00679 Elongation factor G C-terminus ASQ49_09115 PF14492 Elongation Factor G, domain II ASQ49_09115 PF03764 Elongation factor G, domain IV ASQ49_09115 PF00009 Elongation factor Tu GTP binding domain ASQ49_09115 PF03144 Elongation factor Tu domain 2 ASQ49_09120 PF00009 Elongation factor Tu GTP binding domain ASQ49_09120 PF03143 Elongation factor Tu C-terminal domain ASQ49_09120 PF03144 Elongation factor Tu domain 2 ASQ49_09135 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ASQ49_09135 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASQ49_09140 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASQ49_09145 PF00338 Ribosomal protein S10p/S20e ASQ49_09150 PF00297 Ribosomal protein L3 ASQ49_09155 PF00573 Ribosomal protein L4/L1 family ASQ49_09160 PF00276 Ribosomal protein L23 ASQ49_09165 PF00181 Ribosomal Proteins L2, RNA binding domain ASQ49_09165 PF03947 Ribosomal Proteins L2, C-terminal domain ASQ49_09170 PF00203 Ribosomal protein S19 ASQ49_09175 PF00237 Ribosomal protein L22p/L17e ASQ49_09180 PF00189 Ribosomal protein S3, C-terminal domain ASQ49_09180 PF07650 KH domain ASQ49_09185 PF00252 Ribosomal protein L16p/L10e ASQ49_09190 PF00831 Ribosomal L29 protein ASQ49_09195 PF00366 Ribosomal protein S17 ASQ49_09205 PF00356 Bacterial regulatory proteins, lacI family ASQ49_09215 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_09220 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_09225 PF00005 ABC transporter ASQ49_09225 PF17760 UvrA interaction domain ASQ49_09225 PF17755 UvrA DNA-binding domain ASQ49_09230 PF00238 Ribosomal protein L14p/L23e ASQ49_09235 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ASQ49_09235 PF00467 KOW motif ASQ49_09240 PF00281 Ribosomal protein L5 ASQ49_09240 PF00673 ribosomal L5P family C-terminus ASQ49_09245 PF00253 Ribosomal protein S14p/S29e ASQ49_09250 PF00410 Ribosomal protein S8 ASQ49_09255 PF00347 Ribosomal protein L6 ASQ49_09260 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ASQ49_09265 PF00333 Ribosomal protein S5, N-terminal domain ASQ49_09265 PF03719 Ribosomal protein S5, C-terminal domain ASQ49_09270 PF00327 Ribosomal protein L30p/L7e ASQ49_09275 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ASQ49_09280 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_09285 PF12911 N-terminal TM domain of oligopeptide transport permease C ASQ49_09285 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_09290 PF00005 ABC transporter ASQ49_09290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_09295 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASQ49_09305 PF00344 SecY translocase ASQ49_09315 PF00557 Metallopeptidase family M24 ASQ49_09330 PF01176 Translation initiation factor 1A / IF-1 ASQ49_09335 PF00444 Ribosomal protein L36 ASQ49_09340 PF00416 Ribosomal protein S13/S18 ASQ49_09345 PF00411 Ribosomal protein S11 ASQ49_09350 PF00163 Ribosomal protein S4/S9 N-terminal domain ASQ49_09350 PF01479 S4 domain ASQ49_09355 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ASQ49_09355 PF01000 RNA polymerase Rpb3/RpoA insert domain ASQ49_09355 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ASQ49_09360 PF01196 Ribosomal protein L17 ASQ49_09365 PF13579 Glycosyl transferase 4-like domain ASQ49_09365 PF00534 Glycosyl transferases group 1 ASQ49_09375 PF02540 NAD synthase ASQ49_09375 PF00117 Glutamine amidotransferase class-I ASQ49_09375 PF00958 GMP synthase C terminal domain ASQ49_09380 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ASQ49_09380 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ASQ49_09390 PF00005 ABC transporter ASQ49_09395 PF02361 Cobalt transport protein ASQ49_09405 PF08468 Methyltransferase small domain N-terminal ASQ49_09405 PF05175 Methyltransferase small domain ASQ49_09410 PF01416 tRNA pseudouridine synthase ASQ49_09415 PF02390 Putative methyltransferase ASQ49_09435 PF00572 Ribosomal protein L13 ASQ49_09440 PF00380 Ribosomal protein S9/S16 ASQ49_09450 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASQ49_09450 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASQ49_09450 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASQ49_09450 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASQ49_09460 PF00485 Phosphoribulokinase / Uridine kinase family ASQ49_09465 PF08241 Methyltransferase domain ASQ49_09470 PF01380 SIS domain ASQ49_09475 PF01648 4'-phosphopantetheinyl transferase superfamily ASQ49_09480 PF01256 Carbohydrate kinase ASQ49_09480 PF03853 YjeF-related protein N-terminus ASQ49_09485 PF00534 Glycosyl transferases group 1 ASQ49_09485 PF13439 Glycosyltransferase Family 4 ASQ49_09490 PF00270 DEAD/DEAH box helicase ASQ49_09490 PF00271 Helicase conserved C-terminal domain ASQ49_09495 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ASQ49_09500 PF00583 Acetyltransferase (GNAT) family ASQ49_09500 PF00814 Glycoprotease family ASQ49_09510 PF00814 Glycoprotease family ASQ49_09515 PF03051 Peptidase C1-like family ASQ49_09530 PF01875 Memo-like protein ASQ49_09540 PF18096 THUMP domain-like ASQ49_09550 PF00166 Chaperonin 10 Kd subunit ASQ49_09555 PF00118 TCP-1/cpn60 chaperonin family ASQ49_09565 PF00571 CBS domain ASQ49_09565 PF00478 IMP dehydrogenase / GMP reductase domain ASQ49_09570 PF00478 IMP dehydrogenase / GMP reductase domain ASQ49_09575 PF01817 Chorismate mutase type II ASQ49_09575 PF02153 Prephenate dehydrogenase ASQ49_09580 PF06426 Serine acetyltransferase, N-terminal ASQ49_09580 PF00132 Bacterial transferase hexapeptide (six repeats) ASQ49_09585 PF02540 NAD synthase ASQ49_09585 PF00958 GMP synthase C terminal domain ASQ49_09585 PF00117 Glutamine amidotransferase class-I ASQ49_09610 PF00196 Bacterial regulatory proteins, luxR family ASQ49_09610 PF00072 Response regulator receiver domain ASQ49_09615 PF04226 Transglycosylase associated protein ASQ49_09620 PF13091 PLD-like domain ASQ49_09625 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_09630 PF09383 NIL domain ASQ49_09630 PF00005 ABC transporter ASQ49_09635 PF03180 NLPA lipoprotein ASQ49_09650 PF00580 UvrD/REP helicase N-terminal domain ASQ49_09650 PF13361 UvrD-like helicase C-terminal domain ASQ49_09655 PF01551 Peptidase family M23 ASQ49_09655 PF08460 Bacterial SH3 domain ASQ49_09660 PF00549 CoA-ligase ASQ49_09660 PF08442 ATP-grasp domain ASQ49_09665 PF02629 CoA binding domain ASQ49_09665 PF00549 CoA-ligase ASQ49_09680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASQ49_09680 PF01872 RibD C-terminal domain ASQ49_09685 PF00677 Lumazine binding domain ASQ49_09690 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ASQ49_09690 PF00925 GTP cyclohydrolase II ASQ49_09695 PF00885 6,7-dimethyl-8-ribityllumazine synthase ASQ49_09700 PF00551 Formyl transferase ASQ49_09705 PF02142 MGS-like domain ASQ49_09705 PF01808 AICARFT/IMPCHase bienzyme ASQ49_09715 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ASQ49_09715 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ASQ49_09725 PF00171 Aldehyde dehydrogenase family ASQ49_09730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ASQ49_09730 PF00056 lactate/malate dehydrogenase, NAD binding domain ASQ49_09735 PF00551 Formyl transferase ASQ49_09740 PF03971 Monomeric isocitrate dehydrogenase ASQ49_09750 PF01595 Cyclin M transmembrane N-terminal domain ASQ49_09750 PF03471 Transporter associated domain ASQ49_09750 PF00571 CBS domain ASQ49_09760 PF02608 ABC transporter substrate-binding protein PnrA-like ASQ49_09780 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASQ49_09785 PF00075 RNase H ASQ49_09790 PF09334 tRNA synthetases class I (M) ASQ49_09790 PF08264 Anticodon-binding domain of tRNA ASQ49_09800 PF05544 Proline racemase ASQ49_09810 PF07355 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) ASQ49_09825 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ASQ49_09825 PF13237 4Fe-4S dicluster domain ASQ49_09825 PF13375 RnfC Barrel sandwich hybrid domain ASQ49_09825 PF10531 SLBB domain ASQ49_09830 PF00202 Aminotransferase class-III ASQ49_09840 PF00501 AMP-binding enzyme ASQ49_09840 PF13193 AMP-binding enzyme C-terminal domain ASQ49_09845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASQ49_09845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASQ49_09845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASQ49_09845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASQ49_09850 PF01048 Phosphorylase superfamily ASQ49_09855 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASQ49_09855 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_09865 PF02785 Biotin carboxylase C-terminal domain ASQ49_09865 PF00364 Biotin-requiring enzyme ASQ49_09865 PF00289 Biotin carboxylase, N-terminal domain ASQ49_09865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASQ49_09875 PF08543 Phosphomethylpyrimidine kinase ASQ49_09885 PF00106 short chain dehydrogenase ASQ49_09900 PF02545 Maf-like protein ASQ49_09910 PF01039 Carboxyl transferase domain ASQ49_09920 PF03575 Peptidase family S51 ASQ49_09930 PF02222 ATP-grasp domain ASQ49_09930 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ASQ49_09935 PF00731 AIR carboxylase ASQ49_09940 PF03816 Cell envelope-related transcriptional attenuator domain ASQ49_09955 PF00483 Nucleotidyl transferase ASQ49_09955 PF01050 Mannose-6-phosphate isomerase ASQ49_09965 PF02467 Transcription factor WhiB ASQ49_10030 PF02446 4-alpha-glucanotransferase ASQ49_10035 PF00216 Bacterial DNA-binding protein ASQ49_10040 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ASQ49_10040 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ASQ49_10045 PF02617 ATP-dependent Clp protease adaptor protein ClpS ASQ49_10060 PF04023 FeoA domain ASQ49_10060 PF07670 Nucleoside recognition ASQ49_10060 PF02421 Ferrous iron transport protein B ASQ49_10060 PF17910 FeoB cytosolic helical domain ASQ49_10060 PF07664 Ferrous iron transport protein B C terminus ASQ49_10070 PF01177 Asp/Glu/Hydantoin racemase ASQ49_10075 PF01138 3' exoribonuclease family, domain 1 ASQ49_10075 PF03725 3' exoribonuclease family, domain 2 ASQ49_10080 PF01725 Ham1 family ASQ49_10085 PF00303 Thymidylate synthase ASQ49_10090 PF00186 Dihydrofolate reductase ASQ49_10095 PF11799 impB/mucB/samB family C-terminal domain ASQ49_10095 PF00817 impB/mucB/samB family ASQ49_10110 PF00578 AhpC/TSA family ASQ49_10120 PF00166 Chaperonin 10 Kd subunit ASQ49_10125 PF00117 Glutamine amidotransferase class-I ASQ49_10140 PF07685 CobB/CobQ-like glutamine amidotransferase domain ASQ49_10145 PF02875 Mur ligase family, glutamate ligase domain ASQ49_10145 PF01225 Mur ligase family, catalytic domain ASQ49_10145 PF08245 Mur ligase middle domain ASQ49_10160 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASQ49_10160 PF14579 Helix-hairpin-helix motif ASQ49_10160 PF02811 PHP domain ASQ49_10160 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASQ49_10170 PF13520 Amino acid permease ASQ49_10175 PF17760 UvrA interaction domain ASQ49_10175 PF17755 UvrA DNA-binding domain ASQ49_10175 PF00005 ABC transporter ASQ49_10180 PF03601 Conserved hypothetical protein 698 ASQ49_10200 PF00005 ABC transporter ASQ49_10215 PF00324 Amino acid permease ASQ49_10225 PF09383 NIL domain ASQ49_10225 PF00005 ABC transporter ASQ49_10235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_10235 PF07730 Histidine kinase ASQ49_10235 PF13492 GAF domain ASQ49_10240 PF00072 Response regulator receiver domain ASQ49_10240 PF00196 Bacterial regulatory proteins, luxR family ASQ49_10255 PF00132 Bacterial transferase hexapeptide (six repeats) ASQ49_10260 PF13847 Methyltransferase domain ASQ49_10265 PF02567 Phenazine biosynthesis-like protein ASQ49_10270 PF04073 Aminoacyl-tRNA editing domain ASQ49_10275 PF01177 Asp/Glu/Hydantoin racemase ASQ49_10295 PF00440 Bacterial regulatory proteins, tetR family ASQ49_10315 PF00271 Helicase conserved C-terminal domain ASQ49_10315 PF00176 SNF2 family N-terminal domain ASQ49_10335 PF01177 Asp/Glu/Hydantoin racemase ASQ49_10340 PF00958 GMP synthase C terminal domain ASQ49_10340 PF03352 Methyladenine glycosylase ASQ49_10340 PF13302 Acetyltransferase (GNAT) domain ASQ49_10340 PF13673 Acetyltransferase (GNAT) domain ASQ49_10340 PF00117 Glutamine amidotransferase class-I ASQ49_10350 PF13649 Methyltransferase domain ASQ49_10365 PF00929 Exonuclease ASQ49_10380 PF00436 Single-strand binding protein family ASQ49_10390 PF12848 ABC transporter ASQ49_10390 PF00005 ABC transporter ASQ49_10395 PF01565 FAD binding domain ASQ49_10395 PF13183 4Fe-4S dicluster domain ASQ49_10395 PF02913 FAD linked oxidases, C-terminal domain ASQ49_10405 PF00501 AMP-binding enzyme ASQ49_10410 PF00501 AMP-binding enzyme ASQ49_10425 PF07690 Major Facilitator Superfamily ASQ49_10435 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ASQ49_10435 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ASQ49_10445 PF11838 ERAP1-like C-terminal domain ASQ49_10445 PF01433 Peptidase family M1 domain ASQ49_10450 PF01323 DSBA-like thioredoxin domain ASQ49_10455 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ASQ49_10455 PF03120 NAD-dependent DNA ligase OB-fold domain ASQ49_10455 PF01653 NAD-dependent DNA ligase adenylation domain ASQ49_10455 PF00533 BRCA1 C Terminus (BRCT) domain ASQ49_10455 PF12826 Helix-hairpin-helix motif ASQ49_10465 PF13530 Sterol carrier protein domain ASQ49_10465 PF17668 Acetyltransferase (GNAT) domain ASQ49_10470 PF02502 Ribose/Galactose Isomerase ASQ49_10480 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ASQ49_10480 PF06827 Zinc finger found in FPG and IleRS ASQ49_10480 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ASQ49_10490 PF01336 OB-fold nucleic acid binding domain ASQ49_10490 PF00152 tRNA synthetases class II (D, K and N) ASQ49_10490 PF16995 Transmembrane region of lysyl-tRNA synthetase ASQ49_10490 PF09924 Uncharacterised conserved protein (DUF2156) ASQ49_10510 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ASQ49_10510 PF05698 Bacterial trigger factor protein (TF) C-terminus ASQ49_10510 PF05697 Bacterial trigger factor protein (TF) ASQ49_10515 PF01594 AI-2E family transporter ASQ49_10520 PF00574 Clp protease ASQ49_10525 PF00574 Clp protease ASQ49_10530 PF06689 ClpX C4-type zinc finger ASQ49_10530 PF10431 C-terminal, D2-small domain, of ClpB protein ASQ49_10530 PF07724 AAA domain (Cdc48 subfamily) ASQ49_10540 PF07676 WD40-like Beta Propeller Repeat ASQ49_10540 PF14684 Tricorn protease C1 domain ASQ49_10540 PF03572 Peptidase family S41 ASQ49_10540 PF14685 Tricorn protease PDZ domain ASQ49_10555 PF08264 Anticodon-binding domain of tRNA ASQ49_10555 PF00133 tRNA synthetases class I (I, L, M and V) ASQ49_10565 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ASQ49_10575 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ASQ49_10575 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ASQ49_10580 PF01040 UbiA prenyltransferase family ASQ49_10585 PF02628 Cytochrome oxidase assembly protein ASQ49_10595 PF00005 ABC transporter ASQ49_10600 PF03030 Inorganic H+ pyrophosphatase ASQ49_10605 PF00356 Bacterial regulatory proteins, lacI family ASQ49_10610 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_10615 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_10615 PF14785 Maltose transport system permease protein MalF P2 domain ASQ49_10630 PF01458 Uncharacterized protein family (UPF0051) ASQ49_10635 PF01458 Uncharacterized protein family (UPF0051) ASQ49_10640 PF00355 Rieske [2Fe-2S] domain ASQ49_10645 PF00005 ABC transporter ASQ49_10650 PF00266 Aminotransferase class-V ASQ49_10655 PF01592 NifU-like N terminal domain ASQ49_10660 PF01883 Iron-sulfur cluster assembly protein ASQ49_10680 PF04228 Putative neutral zinc metallopeptidase ASQ49_10700 PF12848 ABC transporter ASQ49_10700 PF00005 ABC transporter ASQ49_10745 PF00206 Lyase ASQ49_10745 PF10415 Fumarase C C-terminus ASQ49_10755 PF13288 DXP reductoisomerase C-terminal domain ASQ49_10755 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ASQ49_10755 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ASQ49_10760 PF00005 ABC transporter ASQ49_10775 PF13593 SBF-like CPA transporter family (DUF4137) ASQ49_10780 PF00588 SpoU rRNA Methylase family ASQ49_10800 PF01327 Polypeptide deformylase ASQ49_10810 PF02899 Phage integrase, N-terminal SAM-like domain ASQ49_10810 PF00589 Phage integrase family ASQ49_10815 PF01551 Peptidase family M23 ASQ49_10825 PF05762 VWA domain containing CoxE-like protein ASQ49_10835 PF07728 AAA domain (dynein-related subfamily) ASQ49_10840 PF13569 Domain of unknown function (DUF4132) ASQ49_10850 PF00318 Ribosomal protein S2 ASQ49_10855 PF00889 Elongation factor TS ASQ49_10860 PF00696 Amino acid kinase family ASQ49_10865 PF01765 Ribosome recycling factor ASQ49_10875 PF04055 Radical SAM superfamily ASQ49_10880 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ASQ49_10880 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ASQ49_10890 PF17820 PDZ domain ASQ49_10890 PF02163 Peptidase family M50 ASQ49_10895 PF04551 GcpE protein ASQ49_10910 PF07731 Multicopper oxidase ASQ49_10910 PF07732 Multicopper oxidase ASQ49_10915 PF04174 A circularly permuted ATPgrasp ASQ49_10920 PF04168 A predicted alpha-helical domain with a conserved ER motif. ASQ49_10920 PF14403 Circularly permuted ATP-grasp type 2 ASQ49_10925 PF08379 Bacterial transglutaminase-like N-terminal region ASQ49_10925 PF01841 Transglutaminase-like superfamily ASQ49_10935 PF03129 Anticodon binding domain ASQ49_10935 PF04073 Aminoacyl-tRNA editing domain ASQ49_10935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASQ49_10945 PF01925 Sulfite exporter TauE/SafE ASQ49_10955 PF17384 RimP C-terminal SH3 domain ASQ49_10955 PF02576 RimP N-terminal domain ASQ49_10960 PF08529 NusA N-terminal domain ASQ49_10960 PF13184 NusA-like KH domain ASQ49_10970 PF11987 Translation-initiation factor 2 ASQ49_10970 PF00009 Elongation factor Tu GTP binding domain ASQ49_10970 PF04760 Translation initiation factor IF-2, N-terminal region ASQ49_10975 PF03109 ABC1 family ASQ49_10980 PF02033 Ribosome-binding factor A ASQ49_10985 PF13685 Iron-containing alcohol dehydrogenase ASQ49_10995 PF03829 PTS system glucitol/sorbitol-specific IIA component ASQ49_11000 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ASQ49_11000 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ASQ49_11005 PF03608 PTS system enzyme II sorbitol-specific factor ASQ49_11020 PF01509 TruB family pseudouridylate synthase (N terminal domain) ASQ49_11020 PF09142 tRNA Pseudouridine synthase II, C terminal ASQ49_11020 PF16198 tRNA pseudouridylate synthase B C-terminal domain ASQ49_11035 PF06574 FAD synthetase ASQ49_11035 PF01687 Riboflavin kinase ASQ49_11040 PF00312 Ribosomal protein S15 ASQ49_11045 PF00013 KH domain ASQ49_11045 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ASQ49_11045 PF01138 3' exoribonuclease family, domain 1 ASQ49_11045 PF00575 S1 RNA binding domain ASQ49_11050 PF05173 Dihydrodipicolinate reductase, C-terminus ASQ49_11050 PF01113 Dihydrodipicolinate reductase, N-terminus ASQ49_11060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASQ49_11060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASQ49_11060 PF00205 Thiamine pyrophosphate enzyme, central domain ASQ49_11070 PF12706 Beta-lactamase superfamily domain ASQ49_11070 PF17770 Ribonuclease J C-terminal domain ASQ49_11070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ASQ49_11075 PF00830 Ribosomal L28 family ASQ49_11085 PF00271 Helicase conserved C-terminal domain ASQ49_11085 PF17191 RecG wedge domain ASQ49_11085 PF00270 DEAD/DEAH box helicase ASQ49_11090 PF12900 Pyridoxamine 5'-phosphate oxidase ASQ49_11100 PF01467 Cytidylyltransferase-like ASQ49_11105 PF02620 Large ribosomal RNA subunit accumulation protein YceD ASQ49_11110 PF01783 Ribosomal L32p protein family ASQ49_11115 PF00035 Double-stranded RNA binding motif ASQ49_11115 PF14622 Ribonuclease-III-like ASQ49_11120 PF06827 Zinc finger found in FPG and IleRS ASQ49_11120 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ASQ49_11120 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ASQ49_11125 PF00248 Aldo/keto reductase family ASQ49_11160 PF00448 SRP54-type protein, GTPase domain ASQ49_11160 PF02881 SRP54-type protein, helical bundle domain ASQ49_11190 PF02881 SRP54-type protein, helical bundle domain ASQ49_11190 PF02978 Signal peptide binding domain ASQ49_11190 PF00448 SRP54-type protein, GTPase domain ASQ49_11195 PF01979 Amidohydrolase family ASQ49_11200 PF00886 Ribosomal protein S16 ASQ49_11210 PF01782 RimM N-terminal domain ASQ49_11210 PF05239 PRC-barrel domain ASQ49_11215 PF01746 tRNA (Guanine-1)-methyltransferase ASQ49_11225 PF02910 Fumarate reductase flavoprotein C-term ASQ49_11225 PF00890 FAD binding domain ASQ49_11230 PF13183 4Fe-4S dicluster domain ASQ49_11230 PF13085 2Fe-2S iron-sulfur cluster binding domain ASQ49_11235 PF01245 Ribosomal protein L19 ASQ49_11240 PF10502 Signal peptidase, peptidase S26 ASQ49_11245 PF01351 Ribonuclease HII ASQ49_11250 PF10611 Protein of unknown function (DUF2469) ASQ49_11255 PF02021 Uncharacterised protein family UPF0102 ASQ49_11260 PF01078 Magnesium chelatase, subunit ChlI ASQ49_11260 PF13335 Magnesium chelatase, subunit ChlI C-terminal ASQ49_11275 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ASQ49_11290 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_11295 PF00356 Bacterial regulatory proteins, lacI family ASQ49_11305 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_11315 PF13416 Bacterial extracellular solute-binding protein ASQ49_11320 PF00356 Bacterial regulatory proteins, lacI family ASQ49_11325 PF00083 Sugar (and other) transporter ASQ49_11330 PF00596 Class II Aldolase and Adducin N-terminal domain ASQ49_11335 PF02610 L-arabinose isomerase ASQ49_11335 PF11762 L-arabinose isomerase C-terminal domain ASQ49_11340 PF00356 Bacterial regulatory proteins, lacI family ASQ49_11350 PF00665 Integrase core domain ASQ49_11375 PF01546 Peptidase family M20/M25/M40 ASQ49_11375 PF07687 Peptidase dimerisation domain ASQ49_11380 PF00285 Citrate synthase, C-terminal domain ASQ49_11385 PF00248 Aldo/keto reductase family ASQ49_11395 PF04973 Nicotinamide mononucleotide transporter ASQ49_11400 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ASQ49_11405 PF01634 ATP phosphoribosyltransferase ASQ49_11405 PF08029 HisG, C-terminal domain ASQ49_11440 PF13344 Haloacid dehalogenase-like hydrolase ASQ49_11440 PF18407 GCN5-related N-acetyltransferase like domain ASQ49_11445 PF02632 BioY family ASQ49_11450 PF00005 ABC transporter ASQ49_11455 PF02361 Cobalt transport protein ASQ49_11460 PF01479 S4 domain ASQ49_11460 PF01728 FtsJ-like methyltransferase ASQ49_11465 PF01513 ATP-NAD kinase ASQ49_11470 PF02463 RecF/RecN/SMC N terminal domain ASQ49_11475 PF06418 CTP synthase N-terminus ASQ49_11475 PF00117 Glutamine amidotransferase class-I ASQ49_11485 PF02899 Phage integrase, N-terminal SAM-like domain ASQ49_11485 PF00589 Phage integrase family ASQ49_11490 PF13614 AAA domain ASQ49_11500 PF00849 RNA pseudouridylate synthase ASQ49_11500 PF01479 S4 domain ASQ49_11510 PF00749 tRNA synthetases class I (E and Q), catalytic domain ASQ49_11515 PF13280 WYL domain ASQ49_11520 PF13280 WYL domain ASQ49_11530 PF02416 mttA/Hcf106 family ASQ49_11535 PF00902 Sec-independent protein translocase protein (TatC) ASQ49_11540 PF00781 Diacylglycerol kinase catalytic domain ASQ49_11545 PF08148 DSHCT (NUC185) domain ASQ49_11545 PF00271 Helicase conserved C-terminal domain ASQ49_11545 PF00270 DEAD/DEAH box helicase ASQ49_11550 PF00977 Histidine biosynthesis protein ASQ49_11555 PF01230 HIT domain ASQ49_11560 PF00205 Thiamine pyrophosphate enzyme, central domain ASQ49_11560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASQ49_11560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASQ49_11565 PF10369 Small subunit of acetolactate synthase ASQ49_11570 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ASQ49_11570 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ASQ49_11590 PF00180 Isocitrate/isopropylmalate dehydrogenase ASQ49_11595 PF01063 Amino-transferase class IV ASQ49_11600 PF08502 LeuA allosteric (dimerisation) domain ASQ49_11600 PF00682 HMGL-like ASQ49_11605 PF00591 Glycosyl transferase family, a/b domain ASQ49_11605 PF02885 Glycosyl transferase family, helical bundle domain ASQ49_11605 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ASQ49_11610 PF01557 Fumarylacetoacetate (FAA) hydrolase family ASQ49_11630 PF01614 Bacterial transcriptional regulator ASQ49_11630 PF09339 IclR helix-turn-helix domain ASQ49_11635 PF00330 Aconitase family (aconitate hydratase) ASQ49_11640 PF00694 Aconitase C-terminal domain ASQ49_11650 PF07478 D-ala D-ala ligase C-terminus ASQ49_11650 PF01820 D-ala D-ala ligase N-terminus ASQ49_11665 PF02769 AIR synthase related protein, C-terminal domain ASQ49_11665 PF00586 AIR synthase related protein, N-terminal domain ASQ49_11670 PF17854 FtsK alpha domain ASQ49_11670 PF09397 Ftsk gamma domain ASQ49_11670 PF01580 FtsK/SpoIIIE family ASQ49_11680 PF05656 Protein of unknown function (DUF805) ASQ49_11695 PF00472 RF-1 domain ASQ49_11695 PF03462 PCRF domain ASQ49_11700 PF00005 ABC transporter ASQ49_11705 PF18075 FtsX extracellular domain ASQ49_11705 PF02687 FtsX-like permease family ASQ49_11710 PF01668 SmpB protein ASQ49_11715 PF02774 Semialdehyde dehydrogenase, dimerisation domain ASQ49_11715 PF01118 Semialdehyde dehydrogenase, NAD binding domain ASQ49_11720 PF01960 ArgJ family ASQ49_11725 PF00696 Amino acid kinase family ASQ49_11730 PF00202 Aminotransferase class-III ASQ49_11735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ASQ49_11735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ASQ49_11740 PF00206 Lyase ASQ49_11740 PF14698 Argininosuccinate lyase C-terminal ASQ49_11755 PF02622 Uncharacterized ACR, COG1678 ASQ49_11760 PF00072 Response regulator receiver domain ASQ49_11760 PF00486 Transcriptional regulatory protein, C terminal ASQ49_11765 PF00672 HAMP domain ASQ49_11765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_11765 PF00512 His Kinase A (phospho-acceptor) domain ASQ49_11770 PF10647 Lipoprotein LpqB beta-propeller domain ASQ49_11770 PF10646 Sporulation and spore germination ASQ49_11780 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ASQ49_11780 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ASQ49_11790 PF07517 SecA DEAD-like domain ASQ49_11790 PF01043 SecA preprotein cross-linking domain ASQ49_11790 PF07516 SecA Wing and Scaffold domain ASQ49_11810 PF02811 PHP domain ASQ49_11820 PF00579 tRNA synthetases class I (W and Y) ASQ49_11825 PF00270 DEAD/DEAH box helicase ASQ49_11825 PF00271 Helicase conserved C-terminal domain ASQ49_11845 PF00313 'Cold-shock' DNA-binding domain ASQ49_11850 PF00580 UvrD/REP helicase N-terminal domain ASQ49_11850 PF13361 UvrD-like helicase C-terminal domain ASQ49_11855 PF13361 UvrD-like helicase C-terminal domain ASQ49_11855 PF00580 UvrD/REP helicase N-terminal domain ASQ49_11860 PF09297 NADH pyrophosphatase zinc ribbon domain ASQ49_11860 PF00293 NUDIX domain ASQ49_11860 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain ASQ49_11870 PF12705 PD-(D/E)XK nuclease superfamily ASQ49_11870 PF00580 UvrD/REP helicase N-terminal domain ASQ49_11870 PF13361 UvrD-like helicase C-terminal domain ASQ49_11875 PF17946 RecC C-terminal domain ASQ49_11880 PF13361 UvrD-like helicase C-terminal domain ASQ49_11880 PF00580 UvrD/REP helicase N-terminal domain ASQ49_11880 PF00570 HRDC domain ASQ49_11900 PF13180 PDZ domain ASQ49_11900 PF05362 Lon protease (S16) C-terminal proteolytic domain ASQ49_11910 PF03699 Uncharacterised protein family (UPF0182) ASQ49_11940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ASQ49_11945 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_11955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_11955 PF00005 ABC transporter ASQ49_11960 PF00005 ABC transporter ASQ49_11960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ASQ49_11965 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ASQ49_11965 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ASQ49_11970 PF00459 Inositol monophosphatase family ASQ49_11980 PF03193 RsgA GTPase ASQ49_11985 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASQ49_11995 PF08281 Sigma-70, region 4 ASQ49_11995 PF04542 Sigma-70 region 2 ASQ49_12005 PF07568 Histidine kinase ASQ49_12005 PF12282 Signal transduction histidine kinase ASQ49_12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_12010 PF02467 Transcription factor WhiB ASQ49_12020 PF02779 Transketolase, pyrimidine binding domain ASQ49_12020 PF16870 2-oxoglutarate dehydrogenase C-terminal ASQ49_12020 PF00676 Dehydrogenase E1 component ASQ49_12020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASQ49_12020 PF16078 2-oxoglutarate dehydrogenase N-terminus ASQ49_12030 PF03641 Possible lysine decarboxylase ASQ49_12040 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ASQ49_12040 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ASQ49_12045 PF00742 Homoserine dehydrogenase ASQ49_12045 PF03447 Homoserine dehydrogenase, NAD binding domain ASQ49_12045 PF01842 ACT domain ASQ49_12050 PF00288 GHMP kinases N terminal domain ASQ49_12050 PF08544 GHMP kinases C terminal ASQ49_12055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASQ49_12055 PF07498 Rho termination factor, N-terminal domain ASQ49_12055 PF07497 Rho termination factor, RNA-binding domain ASQ49_12060 PF01197 Ribosomal protein L31 ASQ49_12065 PF03462 PCRF domain ASQ49_12065 PF00472 RF-1 domain ASQ49_12070 PF17827 PrmC N-terminal domain ASQ49_12070 PF13649 Methyltransferase domain ASQ49_12075 PF01300 Telomere recombination ASQ49_12135 PF00733 Asparagine synthase ASQ49_12135 PF13537 Glutamine amidotransferase domain ASQ49_12150 PF13193 AMP-binding enzyme C-terminal domain ASQ49_12150 PF00501 AMP-binding enzyme ASQ49_12160 PF02540 NAD synthase ASQ49_12165 PF13537 Glutamine amidotransferase domain ASQ49_12165 PF00733 Asparagine synthase ASQ49_12175 PF06426 Serine acetyltransferase, N-terminal ASQ49_12175 PF00132 Bacterial transferase hexapeptide (six repeats) ASQ49_12190 PF00119 ATP synthase A chain ASQ49_12195 PF00137 ATP synthase subunit C ASQ49_12200 PF00430 ATP synthase B/B' CF(0) ASQ49_12205 PF00213 ATP synthase delta (OSCP) subunit ASQ49_12210 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASQ49_12210 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASQ49_12210 PF00306 ATP synthase alpha/beta chain, C terminal domain ASQ49_12215 PF00231 ATP synthase ASQ49_12220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ASQ49_12220 PF02874 ATP synthase alpha/beta family, beta-barrel domain ASQ49_12225 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ASQ49_12235 PF01923 Cobalamin adenosyltransferase ASQ49_12240 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ASQ49_12245 PF00561 alpha/beta hydrolase fold ASQ49_12255 PF01939 Endonuclease NucS ASQ49_12280 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ASQ49_12280 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ASQ49_12280 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ASQ49_12280 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ASQ49_12285 PF00085 Thioredoxin ASQ49_12290 PF13419 Haloacid dehalogenase-like hydrolase ASQ49_12295 PF03632 Glycosyl hydrolase family 65 central catalytic domain ASQ49_12295 PF03633 Glycosyl hydrolase family 65, C-terminal domain ASQ49_12295 PF03636 Glycosyl hydrolase family 65, N-terminal domain ASQ49_12300 PF02378 Phosphotransferase system, EIIC ASQ49_12300 PF00367 phosphotransferase system, EIIB ASQ49_12300 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ASQ49_12305 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ASQ49_12305 PF02806 Alpha amylase, C-terminal all-beta domain ASQ49_12305 PF00128 Alpha amylase, catalytic domain ASQ49_12310 PF18085 Maltokinase N-terminal cap domain ASQ49_12315 PF11896 Domain of unknown function (DUF3416) ASQ49_12320 PF11897 Protein of unknown function (DUF3417) ASQ49_12320 PF00343 Carbohydrate phosphorylase ASQ49_12335 PF00266 Aminotransferase class-V ASQ49_12355 PF00005 ABC transporter ASQ49_12380 PF02686 Glu-tRNAGln amidotransferase C subunit ASQ49_12385 PF01425 Amidase ASQ49_12390 PF02637 GatB domain ASQ49_12390 PF02934 GatB/GatE catalytic domain ASQ49_12395 PF00860 Permease family ASQ49_12400 PF00860 Permease family ASQ49_12415 PF01502 Phosphoribosyl-AMP cyclohydrolase ASQ49_12420 PF00425 chorismate binding enzyme ASQ49_12420 PF04715 Anthranilate synthase component I, N terminal region ASQ49_12435 PF00218 Indole-3-glycerol phosphate synthase ASQ49_12440 PF00291 Pyridoxal-phosphate dependent enzyme ASQ49_12445 PF00290 Tryptophan synthase alpha chain ASQ49_12450 PF01790 Prolipoprotein diacylglyceryl transferase ASQ49_12455 PF04898 Glutamate synthase central domain ASQ49_12455 PF01645 Conserved region in glutamate synthase ASQ49_12455 PF01493 GXGXG motif ASQ49_12455 PF00310 Glutamine amidotransferases class-II ASQ49_12460 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_12460 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ASQ49_12465 PF00356 Bacterial regulatory proteins, lacI family ASQ49_12470 PF00232 Glycosyl hydrolase family 1 ASQ49_12475 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_12480 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_12500 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ASQ49_12500 PF07733 Bacterial DNA polymerase III alpha NTPase domain ASQ49_12500 PF14579 Helix-hairpin-helix motif ASQ49_12500 PF02811 PHP domain ASQ49_12510 PF00815 Histidinol dehydrogenase ASQ49_12515 PF00155 Aminotransferase class I and II ASQ49_12520 PF00475 Imidazoleglycerol-phosphate dehydratase ASQ49_12525 PF00117 Glutamine amidotransferase class-I ASQ49_12530 PF00977 Histidine biosynthesis protein ASQ49_12535 PF01709 Transcriptional regulator ASQ49_12540 PF02075 Crossover junction endodeoxyribonuclease RuvC ASQ49_12545 PF07499 RuvA, C-terminal domain ASQ49_12545 PF01330 RuvA N terminal domain ASQ49_12550 PF05496 Holliday junction DNA helicase RuvB P-loop domain ASQ49_12550 PF17864 RuvB AAA lid domain ASQ49_12550 PF05491 RuvB C-terminal winged helix domain ASQ49_12560 PF07549 SecD/SecF GG Motif ASQ49_12560 PF02355 Protein export membrane protein ASQ49_12565 PF02355 Protein export membrane protein ASQ49_12565 PF07549 SecD/SecF GG Motif ASQ49_12570 PF00156 Phosphoribosyl transferase domain ASQ49_12580 PF13291 ACT domain ASQ49_12580 PF04607 Region found in RelA / SpoT proteins ASQ49_12580 PF02824 TGS domain ASQ49_12585 PF14821 Threonine synthase N terminus ASQ49_12585 PF00291 Pyridoxal-phosphate dependent enzyme ASQ49_12590 PF03993 Domain of Unknown Function (DUF349) ASQ49_12595 PF00753 Metallo-beta-lactamase superfamily ASQ49_12600 PF03129 Anticodon binding domain ASQ49_12600 PF13393 Histidyl-tRNA synthetase ASQ49_12605 PF01869 BadF/BadG/BcrA/BcrD ATPase family ASQ49_12610 PF09209 Tetracyclin repressor-like, C-terminal domain ASQ49_12610 PF00440 Bacterial regulatory proteins, tetR family ASQ49_12625 PF01336 OB-fold nucleic acid binding domain ASQ49_12625 PF00152 tRNA synthetases class II (D, K and N) ASQ49_12625 PF02938 GAD domain ASQ49_12640 PF12002 MgsA AAA+ ATPase C terminal ASQ49_12640 PF16193 AAA C-terminal domain ASQ49_12640 PF00004 ATPase family associated with various cellular activities (AAA) ASQ49_12660 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASQ49_12660 PF02272 DHHA1 domain ASQ49_12660 PF01411 tRNA synthetases class II (A) ASQ49_12665 PF03652 Holliday junction resolvase ASQ49_12670 PF02618 YceG-like family ASQ49_12675 PF08501 Shikimate dehydrogenase substrate binding domain ASQ49_12675 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ASQ49_12675 PF01488 Shikimate / quinate 5-dehydrogenase ASQ49_12680 PF01264 Chorismate synthase ASQ49_12685 PF01202 Shikimate kinase ASQ49_12690 PF01761 3-dehydroquinate synthase ASQ49_12700 PF09285 Elongation factor P, C-terminal ASQ49_12700 PF08207 Elongation factor P (EF-P) KOW-like domain ASQ49_12700 PF01132 Elongation factor P (EF-P) OB domain ASQ49_12705 PF01029 NusB family ASQ49_12715 PF00625 Guanylate kinase ASQ49_12720 PF01192 RNA polymerase Rpb6 ASQ49_12725 PF04127 DNA / pantothenate metabolism flavoprotein ASQ49_12725 PF02441 Flavoprotein ASQ49_12730 PF02773 S-adenosylmethionine synthetase, C-terminal domain ASQ49_12730 PF02772 S-adenosylmethionine synthetase, central domain ASQ49_12730 PF00438 S-adenosylmethionine synthetase, N-terminal domain ASQ49_12735 PF00271 Helicase conserved C-terminal domain ASQ49_12735 PF08494 DEAD/H associated ASQ49_12735 PF00270 DEAD/DEAH box helicase ASQ49_12740 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ASQ49_12740 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ASQ49_12765 PF17764 3′ DNA-binding domain (3′BD) ASQ49_12770 PF00551 Formyl transferase ASQ49_12770 PF02911 Formyl transferase, C-terminal domain ASQ49_12775 PF01189 16S rRNA methyltransferase RsmB/F ASQ49_12775 PF01029 NusB family ASQ49_12780 PF00834 Ribulose-phosphate 3 epimerase family ASQ49_12790 PF02607 B12 binding domain ASQ49_12790 PF00809 Pterin binding enzyme ASQ49_12790 PF02310 B12 binding domain ASQ49_12790 PF02574 Homocysteine S-methyltransferase ASQ49_12790 PF02965 Vitamin B12 dependent methionine synthase, activation domain ASQ49_12795 PF08704 tRNA methyltransferase complex GCD14 subunit ASQ49_12805 PF00227 Proteasome subunit ASQ49_12810 PF00227 Proteasome subunit ASQ49_12820 PF02224 Cytidylate kinase ASQ49_12825 PF01926 50S ribosome-binding GTPase ASQ49_12825 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ASQ49_12835 PF02566 OsmC-like protein ASQ49_12840 PF00293 NUDIX domain ASQ49_12850 PF02384 N-6 DNA Methylase ASQ49_12850 PF12161 HsdM N-terminal domain ASQ49_12865 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ASQ49_12865 PF18766 SWI2/SNF2 ATPase ASQ49_12865 PF11867 Domain of unknown function (DUF3387) ASQ49_12895 PF00149 Calcineurin-like phosphoesterase ASQ49_12905 PF00155 Aminotransferase class I and II ASQ49_12905 PF00392 Bacterial regulatory proteins, gntR family ASQ49_12925 PF00202 Aminotransferase class-III ASQ49_12935 PF08031 Berberine and berberine like ASQ49_12935 PF01565 FAD binding domain ASQ49_12995 PF13657 HipA N-terminal domain ASQ49_12995 PF07804 HipA-like C-terminal domain ASQ49_13025 PF07690 Major Facilitator Superfamily ASQ49_13045 PF00248 Aldo/keto reductase family ASQ49_13050 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain ASQ49_13050 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain ASQ49_13055 PF00561 alpha/beta hydrolase fold ASQ49_13060 PF00561 alpha/beta hydrolase fold ASQ49_13060 PF07021 Methionine biosynthesis protein MetW ASQ49_13065 PF01037 Lrp/AsnC ligand binding domain ASQ49_13070 PF00795 Carbon-nitrogen hydrolase ASQ49_13075 PF00535 Glycosyl transferase family 2 ASQ49_13080 PF13397 RNA polymerase-binding protein ASQ49_13090 PF08543 Phosphomethylpyrimidine kinase ASQ49_13095 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ASQ49_13100 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ASQ49_13100 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_13105 PF02554 Carbon starvation protein CstA ASQ49_13105 PF13722 5TM C-terminal transporter carbon starvation CstA ASQ49_13120 PF13520 Amino acid permease ASQ49_13135 PF07238 PilZ domain ASQ49_13135 PF00535 Glycosyl transferase family 2 ASQ49_13145 PF03167 Uracil DNA glycosylase superfamily ASQ49_13155 PF00012 Hsp70 protein ASQ49_13170 PF01205 Uncharacterized protein family UPF0029 ASQ49_13170 PF09186 Domain of unknown function (DUF1949) ASQ49_13175 PF00933 Glycosyl hydrolase family 3 N terminal domain ASQ49_13180 PF00781 Diacylglycerol kinase catalytic domain ASQ49_13185 PF01048 Phosphorylase superfamily ASQ49_13190 PF01300 Telomere recombination ASQ49_13200 PF00365 Phosphofructokinase ASQ49_13205 PF03631 Virulence factor BrkB ASQ49_13210 PF13411 MerR HTH family regulatory protein ASQ49_13215 PF02577 Bifunctional nuclease ASQ49_13220 PF00376 MerR family regulatory protein ASQ49_13225 PF00498 FHA domain ASQ49_13230 PF01597 Glycine cleavage H-protein ASQ49_13235 PF05949 Bacterial protein of unknown function (DUF881) ASQ49_13240 PF06947 Protein of unknown function (DUF1290) ASQ49_13245 PF05949 Bacterial protein of unknown function (DUF881) ASQ49_13255 PF13439 Glycosyltransferase Family 4 ASQ49_13260 PF03279 Bacterial lipid A biosynthesis acyltransferase ASQ49_13270 PF01230 HIT domain ASQ49_13275 PF03129 Anticodon binding domain ASQ49_13275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ASQ49_13275 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASQ49_13280 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_13280 PF00107 Zinc-binding dehydrogenase ASQ49_13310 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain ASQ49_13310 PF01522 Polysaccharide deacetylase ASQ49_13340 PF03976 Polyphosphate kinase 2 (PPK2) ASQ49_13345 PF01641 SelR domain ASQ49_13360 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ASQ49_13360 PF02779 Transketolase, pyrimidine binding domain ASQ49_13360 PF02780 Transketolase, C-terminal domain ASQ49_13365 PF00694 Aconitase C-terminal domain ASQ49_13365 PF00330 Aconitase family (aconitate hydratase) ASQ49_13370 PF05958 tRNA (Uracil-5-)-methyltransferase ASQ49_13370 PF01938 TRAM domain ASQ49_13375 PF13520 Amino acid permease ASQ49_13380 PF02254 TrkA-N domain ASQ49_13380 PF02080 TrkA-C domain ASQ49_13385 PF02080 TrkA-C domain ASQ49_13385 PF02254 TrkA-N domain ASQ49_13400 PF00692 dUTPase ASQ49_13420 PF11268 Protein of unknown function (DUF3071) ASQ49_13435 PF03169 OPT oligopeptide transporter protein ASQ49_13445 PF03989 DNA gyrase C-terminal domain, beta-propeller ASQ49_13445 PF00521 DNA gyrase/topoisomerase IV, subunit A ASQ49_13450 PF00484 Carbonic anhydrase ASQ49_13465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ASQ49_13465 PF00986 DNA gyrase B subunit, carboxyl terminus ASQ49_13465 PF00204 DNA gyrase B ASQ49_13465 PF01751 Toprim domain ASQ49_13480 PF00140 Sigma-70 factor, region 1.2 ASQ49_13480 PF04542 Sigma-70 region 2 ASQ49_13480 PF04539 Sigma-70 region 3 ASQ49_13480 PF04545 Sigma-70, region 4 ASQ49_13485 PF04542 Sigma-70 region 2 ASQ49_13485 PF00140 Sigma-70 factor, region 1.2 ASQ49_13485 PF04539 Sigma-70 region 3 ASQ49_13485 PF04545 Sigma-70, region 4 ASQ49_13490 PF00271 Helicase conserved C-terminal domain ASQ49_13490 PF00270 DEAD/DEAH box helicase ASQ49_13490 PF11898 Domain of unknown function (DUF3418) ASQ49_13490 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ASQ49_13490 PF04408 Helicase associated domain (HA2) ASQ49_13510 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) ASQ49_13515 PF02867 Ribonucleotide reductase, barrel domain ASQ49_13515 PF08471 Class II vitamin B12-dependent ribonucleotide reductase ASQ49_13520 PF03477 ATP cone domain ASQ49_13530 PF13307 Helicase C-terminal domain ASQ49_13535 PF13167 GTP-binding GTPase N-terminal ASQ49_13535 PF01926 50S ribosome-binding GTPase ASQ49_13535 PF16360 GTP-binding GTPase Middle Region ASQ49_13540 PF01678 Diaminopimelate epimerase ASQ49_13555 PF00919 Uncharacterized protein family UPF0004 ASQ49_13555 PF04055 Radical SAM superfamily ASQ49_13565 PF12072 Domain of unknown function (DUF3552) ASQ49_13565 PF00013 KH domain ASQ49_13565 PF01966 HD domain ASQ49_13570 PF02631 RecX family ASQ49_13575 PF00154 recA bacterial DNA recombination protein ASQ49_13585 PF00455 DeoR C terminal sensor domain ASQ49_13585 PF08220 DeoR-like helix-turn-helix domain ASQ49_13595 PF18146 Damage-inducible protein CinA KH domain ASQ49_13595 PF02464 Competence-damaged protein ASQ49_13595 PF00994 Probable molybdopterin binding domain ASQ49_13605 PF04055 Radical SAM superfamily ASQ49_13605 PF18693 TRAM domain ASQ49_13605 PF00919 Uncharacterized protein family UPF0004 ASQ49_13620 PF01230 HIT domain ASQ49_13635 PF00156 Phosphoribosyl transferase domain ASQ49_13640 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ASQ49_13645 PF01180 Dihydroorotate dehydrogenase ASQ49_13650 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ASQ49_13650 PF00175 Oxidoreductase NAD-binding domain ASQ49_13655 PF02142 MGS-like domain ASQ49_13655 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ASQ49_13655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ASQ49_13665 PF01979 Amidohydrolase family ASQ49_13670 PF00156 Phosphoribosyl transferase domain ASQ49_13680 PF00248 Aldo/keto reductase family ASQ49_13685 PF11253 Protein of unknown function (DUF3052) ASQ49_13690 PF17831 Pyruvate dehydrogenase E1 component middle domain ASQ49_13690 PF00456 Transketolase, thiamine diphosphate binding domain ASQ49_13695 PF13556 PucR C-terminal helix-turn-helix domain ASQ49_13695 PF17853 GGDEF-like domain ASQ49_13705 PF08546 Ketopantoate reductase PanE/ApbA C terminal ASQ49_13705 PF02558 Ketopantoate reductase PanE/ApbA ASQ49_13710 PF00698 Acyl transferase domain ASQ49_13715 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ASQ49_13715 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ASQ49_13720 PF00550 Phosphopantetheine attachment site ASQ49_13725 PF02801 Beta-ketoacyl synthase, C-terminal domain ASQ49_13725 PF00109 Beta-ketoacyl synthase, N-terminal domain ASQ49_13735 PF01168 Alanine racemase, N-terminal domain ASQ49_13740 PF07584 Aerotolerance regulator N-terminal ASQ49_13740 PF13519 von Willebrand factor type A domain ASQ49_13745 PF07584 Aerotolerance regulator N-terminal ASQ49_13745 PF13519 von Willebrand factor type A domain ASQ49_13750 PF01882 Protein of unknown function DUF58 ASQ49_13755 PF17863 AAA lid domain ASQ49_13755 PF07726 ATPase family associated with various cellular activities (AAA) ASQ49_13785 PF07690 Major Facilitator Superfamily ASQ49_13790 PF17754 MftR C-terminal domain ASQ49_13790 PF00440 Bacterial regulatory proteins, tetR family ASQ49_13795 PF00069 Protein kinase domain ASQ49_13805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ASQ49_13805 PF03466 LysR substrate binding domain ASQ49_13810 PF01810 LysE type translocator ASQ49_13815 PF01174 SNO glutamine amidotransferase family ASQ49_13820 PF01680 SOR/SNZ family ASQ49_13825 PF00392 Bacterial regulatory proteins, gntR family ASQ49_13835 PF00291 Pyridoxal-phosphate dependent enzyme ASQ49_13845 PF00982 Glycosyltransferase family 20 ASQ49_13870 PF04542 Sigma-70 region 2 ASQ49_13870 PF04539 Sigma-70 region 3 ASQ49_13870 PF04545 Sigma-70, region 4 ASQ49_13875 PF13662 Toprim domain ASQ49_13875 PF08275 DNA primase catalytic core, N-terminal domain ASQ49_13875 PF10410 DnaB-helicase binding domain of primase ASQ49_13875 PF08278 DNA primase DnaG DnaB-binding ASQ49_13875 PF01807 CHC2 zinc finger ASQ49_13880 PF01966 HD domain ASQ49_13880 PF13286 Phosphohydrolase-associated domain ASQ49_13895 PF01207 Dihydrouridine synthase (Dus) ASQ49_13910 PF02910 Fumarate reductase flavoprotein C-term ASQ49_13910 PF00890 FAD binding domain ASQ49_13920 PF00282 Pyridoxal-dependent decarboxylase conserved domain ASQ49_13930 PF02445 Quinolinate synthetase A protein ASQ49_13935 PF00890 FAD binding domain ASQ49_13935 PF02910 Fumarate reductase flavoprotein C-term ASQ49_13940 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ASQ49_13940 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ASQ49_13945 PF03129 Anticodon binding domain ASQ49_13945 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ASQ49_13955 PF01475 Ferric uptake regulator family ASQ49_13980 PF06100 MCRA family ASQ49_13985 PF00107 Zinc-binding dehydrogenase ASQ49_13985 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_13990 PF02565 Recombination protein O C terminal ASQ49_13990 PF11967 Recombination protein O N terminal ASQ49_13995 PF00082 Subtilase family ASQ49_14005 PF01255 Putative undecaprenyl diphosphate synthase ASQ49_14020 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_14025 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASQ49_14030 PF08502 LeuA allosteric (dimerisation) domain ASQ49_14030 PF00682 HMGL-like ASQ49_14035 PF07969 Amidohydrolase family ASQ49_14040 PF01926 50S ribosome-binding GTPase ASQ49_14040 PF07650 KH domain ASQ49_14045 PF00571 CBS domain ASQ49_14045 PF01595 Cyclin M transmembrane N-terminal domain ASQ49_14045 PF03471 Transporter associated domain ASQ49_14050 PF02130 Uncharacterized protein family UPF0054 ASQ49_14055 PF02562 PhoH-like protein ASQ49_14070 PF01209 ubiE/COQ5 methyltransferase family ASQ49_14085 PF00561 alpha/beta hydrolase fold ASQ49_14110 PF00005 ABC transporter ASQ49_14110 PF13732 Domain of unknown function (DUF4162) ASQ49_14115 PF00072 Response regulator receiver domain ASQ49_14115 PF00196 Bacterial regulatory proteins, luxR family ASQ49_14120 PF17200 Single Cache domain 2 ASQ49_14120 PF07730 Histidine kinase ASQ49_14125 PF01702 Queuine tRNA-ribosyltransferase ASQ49_14130 PF00892 EamA-like transporter family ASQ49_14135 PF14602 Hexapeptide repeat of succinyl-transferase ASQ49_14135 PF12804 MobA-like NTP transferase domain ASQ49_14135 PF00132 Bacterial transferase hexapeptide (six repeats) ASQ49_14140 PF16124 RecQ zinc-binding ASQ49_14140 PF09382 RQC domain ASQ49_14140 PF00271 Helicase conserved C-terminal domain ASQ49_14140 PF00570 HRDC domain ASQ49_14140 PF00270 DEAD/DEAH box helicase ASQ49_14150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ASQ49_14150 PF02378 Phosphotransferase system, EIIC ASQ49_14150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ASQ49_14155 PF00107 Zinc-binding dehydrogenase ASQ49_14155 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_14160 PF04452 RNA methyltransferase ASQ49_14165 PF01556 DnaJ C terminal domain ASQ49_14165 PF00684 DnaJ central domain ASQ49_14165 PF00226 DnaJ domain ASQ49_14170 PF08220 DeoR-like helix-turn-helix domain ASQ49_14170 PF01628 HrcA protein C terminal domain ASQ49_14180 PF00459 Inositol monophosphatase family ASQ49_14190 PF04055 Radical SAM superfamily ASQ49_14200 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_14205 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_14210 PF07992 Pyridine nucleotide-disulphide oxidoreductase ASQ49_14210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ASQ49_14215 PF07690 Major Facilitator Superfamily ASQ49_14215 PF00083 Sugar (and other) transporter ASQ49_14220 PF00440 Bacterial regulatory proteins, tetR family ASQ49_14220 PF17754 MftR C-terminal domain ASQ49_14225 PF00005 ABC transporter ASQ49_14225 PF13732 Domain of unknown function (DUF4162) ASQ49_14240 PF16177 Acetyl-coenzyme A synthetase N-terminus ASQ49_14240 PF00501 AMP-binding enzyme ASQ49_14240 PF13193 AMP-binding enzyme C-terminal domain ASQ49_14245 PF16177 Acetyl-coenzyme A synthetase N-terminus ASQ49_14245 PF13193 AMP-binding enzyme C-terminal domain ASQ49_14245 PF00501 AMP-binding enzyme ASQ49_14250 PF01694 Rhomboid family ASQ49_14255 PF00378 Enoyl-CoA hydratase/isomerase ASQ49_14260 PF13193 AMP-binding enzyme C-terminal domain ASQ49_14260 PF00501 AMP-binding enzyme ASQ49_14265 PF00425 chorismate binding enzyme ASQ49_14270 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ASQ49_14270 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ASQ49_14275 PF13378 Enolase C-terminal domain-like ASQ49_14275 PF18374 Enolase N-terminal domain-like ASQ49_14295 PF00679 Elongation factor G C-terminus ASQ49_14295 PF06421 GTP-binding protein LepA C-terminus ASQ49_14295 PF00009 Elongation factor Tu GTP binding domain ASQ49_14295 PF03144 Elongation factor Tu domain 2 ASQ49_14300 PF00128 Alpha amylase, catalytic domain ASQ49_14305 PF01649 Ribosomal protein S20 ASQ49_14315 PF04851 Type III restriction enzyme, res subunit ASQ49_14320 PF00753 Metallo-beta-lactamase superfamily ASQ49_14320 PF13567 Domain of unknown function (DUF4131) ASQ49_14320 PF03772 Competence protein ASQ49_14330 PF09334 tRNA synthetases class I (M) ASQ49_14330 PF00133 tRNA synthetases class I (I, L, M and V) ASQ49_14330 PF13603 Leucyl-tRNA synthetase, Domain 2 ASQ49_14330 PF08264 Anticodon-binding domain of tRNA ASQ49_14345 PF01323 DSBA-like thioredoxin domain ASQ49_14355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ASQ49_14385 PF00709 Adenylosuccinate synthetase ASQ49_14430 PF00005 ABC transporter ASQ49_14465 PF01037 Lrp/AsnC ligand binding domain ASQ49_14500 PF00300 Histidine phosphatase superfamily (branch 1) ASQ49_14510 PF01467 Cytidylyltransferase-like ASQ49_14515 PF00171 Aldehyde dehydrogenase family ASQ49_14520 PF00696 Amino acid kinase family ASQ49_14520 PF01472 PUA domain ASQ49_14525 PF01926 50S ribosome-binding GTPase ASQ49_14525 PF01018 GTP1/OBG ASQ49_14525 PF09269 Domain of unknown function (DUF1967) ASQ49_14535 PF01016 Ribosomal L27 protein ASQ49_14540 PF00829 Ribosomal prokaryotic L21 protein ASQ49_14545 PF10150 Ribonuclease E/G family ASQ49_14555 PF01915 Glycosyl hydrolase family 3 C-terminal domain ASQ49_14555 PF00933 Glycosyl hydrolase family 3 N terminal domain ASQ49_14565 PF00334 Nucleoside diphosphate kinase ASQ49_14575 PF02875 Mur ligase family, glutamate ligase domain ASQ49_14575 PF08245 Mur ligase middle domain ASQ49_14585 PF03840 Preprotein translocase SecG subunit ASQ49_14590 PF00121 Triosephosphate isomerase ASQ49_14595 PF00162 Phosphoglycerate kinase ASQ49_14600 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASQ49_14600 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASQ49_14605 PF02650 WhiA C-terminal HTH domain ASQ49_14605 PF10298 WhiA N-terminal LAGLIDADG-like domain ASQ49_14605 PF14527 WhiA LAGLIDADG-like domain ASQ49_14610 PF01933 Uncharacterised protein family UPF0052 ASQ49_14615 PF03668 P-loop ATPase protein family ASQ49_14620 PF02151 UvrB/uvrC motif ASQ49_14620 PF08459 UvrC Helix-hairpin-helix N-terminal ASQ49_14620 PF01541 GIY-YIG catalytic domain ASQ49_14640 PF17760 UvrA interaction domain ASQ49_14640 PF00005 ABC transporter ASQ49_14640 PF17755 UvrA DNA-binding domain ASQ49_14650 PF03741 Integral membrane protein TerC family ASQ49_14655 PF12344 Ultra-violet resistance protein B ASQ49_14655 PF02151 UvrB/uvrC motif ASQ49_14655 PF04851 Type III restriction enzyme, res subunit ASQ49_14655 PF00271 Helicase conserved C-terminal domain ASQ49_14655 PF17757 UvrB interaction domain ASQ49_14670 PF01121 Dephospho-CoA kinase ASQ49_14675 PF00575 S1 RNA binding domain ASQ49_14690 PF00476 DNA polymerase family A ASQ49_14690 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ASQ49_14690 PF01367 5'-3' exonuclease, C-terminal SAM fold ASQ49_14695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_14700 PF03061 Thioesterase superfamily ASQ49_14705 PF03861 ANTAR domain ASQ49_14705 PF00072 Response regulator receiver domain ASQ49_14715 PF00224 Pyruvate kinase, barrel domain ASQ49_14715 PF02887 Pyruvate kinase, alpha/beta domain ASQ49_14720 PF00849 RNA pseudouridylate synthase ASQ49_14725 PF01252 Signal peptidase (SPase) II ASQ49_14730 PF01258 Prokaryotic dksA/traR C4-type zinc finger ASQ49_14745 PF04472 Cell division protein SepF ASQ49_14755 PF12327 FtsZ family, C-terminal domain ASQ49_14755 PF00091 Tubulin/FtsZ family, GTPase domain ASQ49_14760 PF08478 POTRA domain, FtsQ-type ASQ49_14760 PF03799 Cell division protein FtsQ ASQ49_14765 PF08245 Mur ligase middle domain ASQ49_14765 PF02875 Mur ligase family, glutamate ligase domain ASQ49_14765 PF01225 Mur ligase family, catalytic domain ASQ49_14770 PF03033 Glycosyltransferase family 28 N-terminal domain ASQ49_14770 PF04101 Glycosyltransferase family 28 C-terminal domain ASQ49_14775 PF01098 Cell cycle protein ASQ49_14780 PF08245 Mur ligase middle domain ASQ49_14780 PF02875 Mur ligase family, glutamate ligase domain ASQ49_14785 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ASQ49_14785 PF00953 Glycosyl transferase family 4 ASQ49_14790 PF02875 Mur ligase family, glutamate ligase domain ASQ49_14790 PF08245 Mur ligase middle domain ASQ49_14790 PF01225 Mur ligase family, catalytic domain ASQ49_14795 PF02875 Mur ligase family, glutamate ligase domain ASQ49_14795 PF08245 Mur ligase middle domain ASQ49_14795 PF01225 Mur ligase family, catalytic domain ASQ49_14800 PF00905 Penicillin binding protein transpeptidase domain ASQ49_14800 PF03717 Penicillin-binding Protein dimerisation domain ASQ49_14810 PF01795 MraW methylase family ASQ49_14815 PF02381 MraZ protein, putative antitoxin-like ASQ49_14820 PF17863 AAA lid domain ASQ49_14820 PF07726 ATPase family associated with various cellular activities (AAA) ASQ49_14830 PF01841 Transglutaminase-like superfamily ASQ49_14830 PF13559 Domain of unknown function (DUF4129) ASQ49_14830 PF11992 Domain of unknown function (DUF3488) ASQ49_14840 PF08669 Glycine cleavage T-protein C-terminal barrel domain ASQ49_14840 PF01571 Aminomethyltransferase folate-binding domain ASQ49_14845 PF01597 Glycine cleavage H-protein ASQ49_14850 PF02347 Glycine cleavage system P-protein ASQ49_14855 PF00005 ABC transporter ASQ49_14860 PF01061 ABC-2 type transporter ASQ49_14865 PF01061 ABC-2 type transporter ASQ49_14870 PF00392 Bacterial regulatory proteins, gntR family ASQ49_14870 PF07729 FCD domain ASQ49_14880 PF02447 GntP family permease ASQ49_14885 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ASQ49_14885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ASQ49_14890 PF00011 Hsp20/alpha crystallin family ASQ49_14895 PF12697 Alpha/beta hydrolase family ASQ49_14900 PF00005 ABC transporter ASQ49_14920 PF13361 UvrD-like helicase C-terminal domain ASQ49_14920 PF00570 HRDC domain ASQ49_14925 PF02219 Methylenetetrahydrofolate reductase ASQ49_14935 PF02581 Thiamine monophosphate synthase ASQ49_14945 PF00069 Protein kinase domain ASQ49_14945 PF03793 PASTA domain ASQ49_14960 PF01474 Class-II DAHP synthetase family ASQ49_14965 PF00196 Bacterial regulatory proteins, luxR family ASQ49_14965 PF00072 Response regulator receiver domain ASQ49_14985 PF00480 ROK family ASQ49_14990 PF00877 NlpC/P60 family ASQ49_14995 PF01541 GIY-YIG catalytic domain ASQ49_14995 PF00929 Exonuclease ASQ49_15010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ASQ49_15030 PF00591 Glycosyl transferase family, a/b domain ASQ49_15030 PF02885 Glycosyl transferase family, helical bundle domain ASQ49_15040 PF00510 Cytochrome c oxidase subunit III ASQ49_15045 PF00034 Cytochrome c ASQ49_15045 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ASQ49_15050 PF00355 Rieske [2Fe-2S] domain ASQ49_15055 PF13631 Cytochrome b(N-terminal)/b6/petB ASQ49_15065 PF00478 IMP dehydrogenase / GMP reductase domain ASQ49_15065 PF00571 CBS domain ASQ49_15070 PF12270 Cytochrome c oxidase subunit IV ASQ49_15075 PF00115 Cytochrome C and Quinol oxidase polypeptide I ASQ49_15080 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ASQ49_15085 PF01521 Iron-sulphur cluster biosynthesis ASQ49_15120 PF02817 e3 binding domain ASQ49_15120 PF00364 Biotin-requiring enzyme ASQ49_15120 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ASQ49_15125 PF03099 Biotin/lipoate A/B protein ligase family ASQ49_15130 PF05425 Copper resistance protein D ASQ49_15130 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) ASQ49_15135 PF00403 Heavy-metal-associated domain ASQ49_15140 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ASQ49_15140 PF04055 Radical SAM superfamily ASQ49_15150 PF00005 ABC transporter ASQ49_15150 PF16326 ABC transporter C-terminal domain ASQ49_15150 PF12848 ABC transporter ASQ49_15155 PF03448 MgtE intracellular N domain ASQ49_15155 PF01769 Divalent cation transporter ASQ49_15155 PF00571 CBS domain ASQ49_15160 PF09335 SNARE associated Golgi protein ASQ49_15165 PF00534 Glycosyl transferases group 1 ASQ49_15165 PF13439 Glycosyltransferase Family 4 ASQ49_15180 PF00120 Glutamine synthetase, catalytic domain ASQ49_15180 PF03951 Glutamine synthetase, beta-Grasp domain ASQ49_15190 PF01381 Helix-turn-helix ASQ49_15205 PF01784 NIF3 (NGG1p interacting factor 3) ASQ49_15215 PF08335 GlnD PII-uridylyltransferase ASQ49_15215 PF03710 Glutamate-ammonia ligase adenylyltransferase ASQ49_15225 PF00120 Glutamine synthetase, catalytic domain ASQ49_15225 PF03951 Glutamine synthetase, beta-Grasp domain ASQ49_15235 PF00557 Metallopeptidase family M24 ASQ49_15240 PF01544 CorA-like Mg2+ transporter protein ASQ49_15255 PF00324 Amino acid permease ASQ49_15260 PF00795 Carbon-nitrogen hydrolase ASQ49_15265 PF00202 Aminotransferase class-III ASQ49_15275 PF05195 Aminopeptidase P, N-terminal domain ASQ49_15275 PF00557 Metallopeptidase family M24 ASQ49_15305 PF10609 NUBPL iron-transfer P-loop NTPase ASQ49_15305 PF01883 Iron-sulfur cluster assembly protein ASQ49_15310 PF02416 mttA/Hcf106 family ASQ49_15315 PF00701 Dihydrodipicolinate synthetase family ASQ49_15320 PF01596 O-methyltransferase ASQ49_15345 PF00483 Nucleotidyl transferase ASQ49_15350 PF00534 Glycosyl transferases group 1 ASQ49_15350 PF13439 Glycosyltransferase Family 4 ASQ49_15360 PF03641 Possible lysine decarboxylase ASQ49_15365 PF01546 Peptidase family M20/M25/M40 ASQ49_15365 PF07687 Peptidase dimerisation domain ASQ49_15370 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ASQ49_15370 PF14602 Hexapeptide repeat of succinyl-transferase ASQ49_15385 PF00155 Aminotransferase class I and II ASQ49_15390 PF00037 4Fe-4S binding domain ASQ49_15395 PF04294 VanW like protein ASQ49_15400 PF00144 Beta-lactamase ASQ49_15405 PF02233 NAD(P) transhydrogenase beta subunit ASQ49_15410 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ASQ49_15410 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ASQ49_15410 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ASQ49_15415 PF07690 Major Facilitator Superfamily ASQ49_15445 PF02779 Transketolase, pyrimidine binding domain ASQ49_15445 PF02780 Transketolase, C-terminal domain ASQ49_15445 PF00456 Transketolase, thiamine diphosphate binding domain ASQ49_15450 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_15450 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_15460 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ASQ49_15460 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ASQ49_15465 PF13344 Haloacid dehalogenase-like hydrolase ASQ49_15475 PF02502 Ribose/Galactose Isomerase ASQ49_15480 PF08220 DeoR-like helix-turn-helix domain ASQ49_15480 PF00455 DeoR C terminal sensor domain ASQ49_15485 PF00156 Phosphoribosyl transferase domain ASQ49_15490 PF02734 DAK2 domain ASQ49_15490 PF02733 Dak1 domain ASQ49_15495 PF00107 Zinc-binding dehydrogenase ASQ49_15495 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_15500 PF00171 Aldehyde dehydrogenase family ASQ49_15520 PF00005 ABC transporter ASQ49_15525 PF00950 ABC 3 transport family ASQ49_15545 PF00497 Bacterial extracellular solute-binding proteins, family 3 ASQ49_15555 PF00528 Binding-protein-dependent transport system inner membrane component ASQ49_15560 PF00005 ABC transporter ASQ49_15585 PF02310 B12 binding domain ASQ49_15585 PF01642 Methylmalonyl-CoA mutase ASQ49_15590 PF01642 Methylmalonyl-CoA mutase ASQ49_15600 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ASQ49_15600 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ASQ49_15605 PF02903 Alpha amylase, N-terminal ig-like domain ASQ49_15605 PF00128 Alpha amylase, catalytic domain ASQ49_15605 PF16657 Maltogenic Amylase, C-terminal domain ASQ49_15610 PF00324 Amino acid permease ASQ49_15615 PF08534 Redoxin ASQ49_15625 PF07995 Glucose / Sorbosone dehydrogenase ASQ49_15630 PF01842 ACT domain ASQ49_15655 PF00083 Sugar (and other) transporter ASQ49_15660 PF00083 Sugar (and other) transporter ASQ49_15665 PF14765 Polyketide synthase dehydratase ASQ49_15665 PF00698 Acyl transferase domain ASQ49_15665 PF08659 KR domain ASQ49_15665 PF02801 Beta-ketoacyl synthase, C-terminal domain ASQ49_15665 PF00109 Beta-ketoacyl synthase, N-terminal domain ASQ49_15665 PF16197 Ketoacyl-synthetase C-terminal extension ASQ49_15665 PF08240 Alcohol dehydrogenase GroES-like domain ASQ49_15665 PF00550 Phosphopantetheine attachment site ASQ49_15665 PF00107 Zinc-binding dehydrogenase ASQ49_15670 PF00196 Bacterial regulatory proteins, luxR family ASQ49_15670 PF00072 Response regulator receiver domain ASQ49_15690 PF00857 Isochorismatase family ASQ49_15695 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ASQ49_15695 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ASQ49_15715 PF00300 Histidine phosphatase superfamily (branch 1) ASQ49_15720 PF00664 ABC transporter transmembrane region ASQ49_15720 PF00005 ABC transporter ASQ49_15725 PF01636 Phosphotransferase enzyme family ASQ49_15735 PF03747 ADP-ribosylglycohydrolase ASQ49_15755 PF00872 Transposase, Mutator family ASQ49_15805 PF01381 Helix-turn-helix ASQ49_15810 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ASQ49_15815 PF16859 Tetracyclin repressor-like, C-terminal domain ASQ49_15815 PF00440 Bacterial regulatory proteins, tetR family ASQ49_15820 PF00005 ABC transporter ASQ49_15820 PF13732 Domain of unknown function (DUF4162) ASQ49_15840 PF01381 Helix-turn-helix ASQ49_15845 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB ASQ49_15915 PF18766 SWI2/SNF2 ATPase ASQ49_15915 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ASQ49_15915 PF11867 Domain of unknown function (DUF3387) ASQ49_15920 PF01420 Type I restriction modification DNA specificity domain ASQ49_15925 PF02384 N-6 DNA Methylase ASQ49_15930 PF01926 50S ribosome-binding GTPase ASQ49_15930 PF06071 Protein of unknown function (DUF933) ASQ49_15945 PF12704 MacB-like periplasmic core domain ASQ49_15945 PF00005 ABC transporter ASQ49_15945 PF02687 FtsX-like permease family ASQ49_15950 PF02687 FtsX-like permease family ASQ49_15950 PF00005 ABC transporter ASQ49_15950 PF12704 MacB-like periplasmic core domain ASQ49_15955 PF02127 Aminopeptidase I zinc metalloprotease (M18) ASQ49_15960 PF02646 RmuC family ASQ49_15965 PF02401 LytB protein ASQ49_15970 PF02601 Exonuclease VII, large subunit ASQ49_15970 PF13742 OB-fold nucleic acid binding domain ASQ49_15975 PF02609 Exonuclease VII small subunit ASQ49_15985 PF02562 PhoH-like protein ASQ49_15985 PF13638 PIN domain ASQ49_15990 PF03006 Haemolysin-III related ASQ49_15995 PF01255 Putative undecaprenyl diphosphate synthase ASQ49_16000 PF03190 Protein of unknown function, DUF255 ASQ49_16015 PF03449 Transcription elongation factor, N-terminal ASQ49_16015 PF01272 Transcription elongation factor, GreA/GreB, C-term ASQ49_16025 PF01594 AI-2E family transporter ASQ49_16030 PF03167 Uracil DNA glycosylase superfamily ASQ49_16035 PF01625 Peptide methionine sulfoxide reductase ASQ49_16070 PF00579 tRNA synthetases class I (W and Y) ASQ49_16075 PF02863 Arginine repressor, C-terminal domain ASQ49_16075 PF01316 Arginine repressor, DNA binding domain ASQ49_16080 PF00440 Bacterial regulatory proteins, tetR family ASQ49_16080 PF02909 Tetracyclin repressor-like, C-terminal domain ASQ49_16085 PF04055 Radical SAM superfamily ASQ49_16085 PF06968 Biotin and Thiamin Synthesis associated domain ASQ49_16090 PF01588 Putative tRNA binding domain ASQ49_16090 PF03484 tRNA synthetase B5 domain ASQ49_16090 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ASQ49_16090 PF03147 Ferredoxin-fold anticodon binding domain ASQ49_16090 PF03483 B3/4 domain ASQ49_16095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ASQ49_16095 PF01409 tRNA synthetases class II core domain (F) ASQ49_16110 PF00588 SpoU rRNA Methylase family ASQ49_16110 PF12105 SpoU, rRNA methylase, C-terminal ASQ49_16115 PF00453 Ribosomal protein L20 ASQ49_16120 PF01632 Ribosomal protein L35 ASQ49_16125 PF00707 Translation initiation factor IF-3, C-terminal domain ASQ49_16125 PF05198 Translation initiation factor IF-3, N-terminal domain ASQ49_16185 PF04261 Dyp-type peroxidase family ASQ49_16190 PF04454 Encapsulating protein for peroxidase ASQ49_16200 PF02541 Ppx/GppA phosphatase family ASQ49_16215 PF00113 Enolase, C-terminal TIM barrel domain ASQ49_16215 PF03952 Enolase, N-terminal domain ASQ49_16220 PF03819 MazG nucleotide pyrophosphohydrolase domain ASQ49_16230 PF03461 TRCF domain ASQ49_16230 PF00271 Helicase conserved C-terminal domain ASQ49_16230 PF00270 DEAD/DEAH box helicase ASQ49_16230 PF17757 UvrB interaction domain ASQ49_16230 PF02559 CarD-like/TRCF domain ASQ49_16235 PF01195 Peptidyl-tRNA hydrolase ASQ49_16240 PF14693 Ribosomal protein TL5, C-terminal domain ASQ49_16240 PF01386 Ribosomal L25p family ASQ49_16245 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ASQ49_16245 PF14572 Phosphoribosyl synthetase-associated domain ASQ49_16250 PF00132 Bacterial transferase hexapeptide (six repeats) ASQ49_16250 PF12804 MobA-like NTP transferase domain ASQ49_16260 PF00440 Bacterial regulatory proteins, tetR family ASQ49_16265 PF01047 MarR family ASQ49_16270 PF08544 GHMP kinases C terminal ASQ49_16270 PF00288 GHMP kinases N terminal domain ASQ49_16275 PF00398 Ribosomal RNA adenine dimethylase ASQ49_16280 PF01026 TatD related DNase ASQ49_16285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ASQ49_16290 PF16192 C-terminal four TMM region of protein-O-mannosyltransferase ASQ49_16290 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ASQ49_16295 PF00860 Permease family ASQ49_16300 PF00069 Protein kinase domain ASQ49_16305 PF02682 Carboxyltransferase domain, subdomain C and D ASQ49_16320 PF05532 CsbD-like ASQ49_16335 PF07859 alpha/beta hydrolase fold ASQ49_16345 PF00196 Bacterial regulatory proteins, luxR family ASQ49_16345 PF00072 Response regulator receiver domain ASQ49_16350 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ASQ49_16350 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ASQ49_16365 PF01965 DJ-1/PfpI family ASQ49_16375 PF00376 MerR family regulatory protein ASQ49_16375 PF09278 MerR, DNA binding ASQ49_16390 PF02801 Beta-ketoacyl synthase, C-terminal domain ASQ49_16390 PF00109 Beta-ketoacyl synthase, N-terminal domain ASQ49_16405 PF00890 FAD binding domain ASQ49_16430 PF00271 Helicase conserved C-terminal domain ASQ49_16430 PF00176 SNF2 family N-terminal domain ASQ49_16430 PF12419 SNF2 Helicase protein ASQ49_16435 PF13302 Acetyltransferase (GNAT) domain ASQ49_16445 PF00155 Aminotransferase class I and II ASQ49_16460 PF01965 DJ-1/PfpI family ASQ49_16505 PF13538 UvrD-like helicase C-terminal domain ASQ49_16505 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ASQ49_16505 PF14490 Helix-hairpin-helix containing domain ASQ49_16515 PF00892 EamA-like transporter family ASQ49_16525 PF00072 Response regulator receiver domain ASQ49_16525 PF00196 Bacterial regulatory proteins, luxR family ASQ49_16540 PF00398 Ribosomal RNA adenine dimethylase